Citrus Sinensis ID: 021173

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
Protein Sequence
MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPLPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccHHHHHHHHHHHccccEEEEHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccEEEEEccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccccccccEEEEEEccccccEEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccEHEEEcccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccEEEEEEcccccccccccccccccccccccEcccccccccHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHccccHHccccccccccEEEEEcccccEccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEHccccccEEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccc
Coil and Loop (DISEMBL)
mgcftvlkskkkkpeqtvhlkrvnpqehtpttlpepqiptrslqsappsfrtrvkpiplnnttkatnnrtralsapsslDAAEAEQDALASVEfeeqeesksragltkeqrssspqplplpsphtqsaaslkatgsfksgtasgplfasgplplpptgtgtlrnfpldEVAAACHNFFSDRCISEGLSSVMYrasfgddastskkFEATvtrlnpssqgvKEFINDVNTlaslqhpnlckllgfhardgsdqRMLIYERLFHGSldrliygrsdgppidwntRVKIALCAAQgltflheegpfQVIFYYFEMIKTE
Flexible Loop (DISEMBL)
mgcftvlkskkkkpeqtvhlkrvnpqehtpttlpepqiptrslqsappsfrtrvkpiplnnttkatnnrtRALSAPSSLDAAEAEQDALASVEfeeqeesksragltkeqrssspqplplpSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATvtrlnpssqgvKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLtflheegpFQVIFYYFEMIKTE
Low Complexity Region (SEG)
MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLnnttkatnnrtraLSAPSsldaaeaeqdalasVEFEEQEESKSRAGLTKEQRssspqplplpsphtqsAASLKATGSFKSGTASGPLFASgplplpptgtgtlRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE
Disordered region (IsUnstruct)
***************************************************************************************************************************************************************GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASF***********************VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMI***
Disordered Region (DISOPRED)
*GCFT********************************************************************SAPSSLDAAEAEQDALASVE**********************************************************************NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT*
Disordered Region (DISEMBL)
MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNR*************************************************************LKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE
Disordered Region (DISPRO)
*GCFTVLKSKKKKPEQTVHLKRVNPQ**TPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKS**************PLPLPSPHTQSAASLKATGSFKSGTA*****************GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLNNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPLPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	316	2.2.26 [Sep-21-2011]
Q8H186	389	Probable receptor-like pr	no	no	0.455	0.370	0.376	5e-22
Q9LFP7	493	Probable receptor-like pr	no	no	0.462	0.296	0.367	4e-20
P43293	389	Probable serine/threonine	no	no	0.468	0.380	0.363	1e-19
Q9SRH7	490	Receptor-like serine/thre	no	no	0.462	0.297	0.367	1e-19
Q6NKZ9	437	Probable receptor-like se	no	no	0.506	0.366	0.344	6e-19
Q9LQQ8	423	Probable serine/threonine	no	no	0.408	0.304	0.391	5e-18
C0LGE0	1014	Probable LRR receptor-lik	no	no	0.436	0.136	0.361	7e-18
O49839	426	Protein kinase 2A, chloro	no	no	0.5	0.370	0.343	1e-17
Q9XI96	699	Proline-rich receptor-lik	no	no	0.560	0.253	0.326	1e-17
Q9FE20	456	Serine/threonine-protein	no	no	0.474	0.328	0.377	3e-17

>sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1

 Score =  105 bits (261), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 88/154 (57%), Gaps = 10/154 (6%)

Query: 161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDAST----SKKFEATVTRLNPS 216
           T+++F  +E+  A  NF SD  + EG    ++R    +   T    S      V RLNP 
Sbjct: 45  TVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPD 104

Query: 217 S-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY--GRS 273
             QG +E++ ++N L  L HPNL KL+G+   D  +QR+L+YE +  GSL+  ++  G  
Sbjct: 105 GFQGHREWLTEINYLGQLSHPNLVKLIGYCLED--EQRLLVYEFMHKGSLENHLFANGNK 162

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIF 307
           D  P+ W  R+K+AL AA+GL FLH + P +VI+
Sbjct: 163 DFKPLSWILRIKVALDAAKGLAFLHSD-PVKVIY 195

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1

 Score = 99.0 bits (245), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 89/155 (57%), Gaps = 9/155 (5%)

Query: 162 LRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS 217
           LR F  +++  +  NF  +  + EG    +++    ++ +   K        V  LNP  
Sbjct: 127 LRKFTFNDLKLSTRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNPDG 186

Query: 218 -QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP 276
            QG KE++ ++N L +L HPNL KL+G+   D  DQR+L+YE +  GSL+  ++ RS   
Sbjct: 187 LQGHKEWLAEINFLGNLLHPNLVKLVGYCIED--DQRLLVYEFMPRGSLENHLFRRS--L 242

Query: 277 PIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
           P+ W+ R+KIAL AA+GL+FLHEE    VI+  F+
Sbjct: 243 PLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFK 277

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2

 Score = 97.8 bits (242), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 87/157 (55%), Gaps = 9/157 (5%)

Query: 161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPS 216
            L+NF L E+ +A  NF  D  + EG    +++    + +    K        V RLN  
Sbjct: 52  NLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQE 111

Query: 217 S-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD- 274
             QG +E++ ++N L  L HPNL KL+G+   +  + R+L+YE +  GSL+  ++ R   
Sbjct: 112 GFQGHREWLAEINYLGQLDHPNLVKLIGYCLEE--EHRLLVYEFMTRGSLENHLFRRGTF 169

Query: 275 GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
             P+ WNTRV++AL AA+GL FLH   P QVI+  F+
Sbjct: 170 YQPLSWNTRVRMALGAARGLAFLHNAQP-QVIYRDFK 205

May play a role in the regulation of plant growth and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1

 Score = 97.4 bits (241), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 9/155 (5%)

Query: 162 LRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS 217
           L+ F   ++  A  NF  +  + EG    +++    ++ +   K        V  LNP  
Sbjct: 121 LKKFSFIDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNPDG 180

Query: 218 -QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP 276
            QG KE++ ++N L +L HPNL KL+G+   D  DQR+L+YE +  GSL+  ++ RS   
Sbjct: 181 LQGHKEWLAEINYLGNLLHPNLVKLVGYCIED--DQRLLVYEFMPRGSLENHLFRRS--L 236

Query: 277 PIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
           P+ W+ R+KIAL AA+GL+FLHEE    VI+  F+
Sbjct: 237 PLPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFK 271

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6NKZ9|Y4345_ARATH Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana GN=At4g34500 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 17/177 (9%)

Query: 127 SAASLKATGSFK--SGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSDRCIS 184
           SA S +AT  F   S  +SG +  S  +       G  + + L ++  A   F  D  I 
Sbjct: 100 SATSKEATSGFDTLSVASSGDVGTSEAM-------GWGKWYSLKDLEIATRGFSDDNMIG 152

Query: 185 EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGF 244
           EG   V+YRA F D +  + K       LN   Q  KEF  +V  +  ++H NL  L+G+
Sbjct: 153 EGGYGVVYRADFSDGSVAAVK-----NLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLMGY 207

Query: 245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTRVKIALCAAQGLTFLHE 299
            A     QRML+YE + +G+L++ ++G   GP  P+ W+ R+KIA+  A+GL +LHE
Sbjct: 208 CADSAQSQRMLVYEYIDNGNLEQWLHGDV-GPVSPLTWDIRMKIAIGTAKGLAYLHE 263

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LQQ8|RLCK7_ARATH Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 83/156 (53%), Gaps = 27/156 (17%)

Query: 163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------- 215
           + F   E+A A  NF SD  + EG         FG      K F+ T+ +L+        
Sbjct: 89  QTFTFQELAEATGNFRSDCFLGEG--------GFG------KVFKGTIEKLDQVVAIKQL 134

Query: 216 ---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYG 271
                QG++EF+ +V TL+   HPNL KL+GF A    DQR+L+YE +  GSL D L   
Sbjct: 135 DRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAE--GDQRLLVYEYMPQGSLEDHLHVL 192

Query: 272 RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIF 307
            S   P+DWNTR+KIA  AA+GL +LH+     VI+
Sbjct: 193 PSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIY 228

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGE0|Y1765_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1

 Score = 91.7 bits (226), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 14/152 (9%)

Query: 157 TGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS 216
           TGT TLR     ++ AA  NF   R I EG    +Y+    +    + K  +  +R    
Sbjct: 663 TGTFTLR-----QIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSR---- 713

Query: 217 SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP 276
            QG +EF+N++  +++LQHPNL KL G       +Q +L+YE L +  L R ++G+ +  
Sbjct: 714 -QGNREFVNEIGMISALQHPNLVKLYGCCVE--GNQLILVYEYLENNCLSRALFGKDESS 770

Query: 277 --PIDWNTRVKIALCAAQGLTFLHEEGPFQVI 306
              +DW+TR KI L  A+GLTFLHEE   +++
Sbjct: 771 RLKLDWSTRKKIFLGIAKGLTFLHEESRIKIV 802

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1

 Score = 90.9 bits (224), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 90/172 (52%), Gaps = 14/172 (8%)

Query: 150 GPLPLPPT-----GTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSK 204
           GPLP   T      +  L+ F  +E+  A  NF  D  + EG    +++      + T+ 
Sbjct: 54  GPLPTLRTEGEILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTAS 113

Query: 205 K----FEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259
           +        V +L P   QG KE++ +VN L  L HPNL  L+G+ A    + R+L+YE 
Sbjct: 114 RPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAE--GENRLLVYEF 171

Query: 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
           +  GSL+  ++ R    P+ W  R+K+A+ AA+GLTFLHE    QVI+  F+
Sbjct: 172 MPKGSLENHLF-RRGAQPLTWAIRMKVAVGAAKGLTFLHEAKS-QVIYRDFK 221

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XI96|PERK7_ARATH Proline-rich receptor-like protein kinase PERK7 OS=Arabidopsis thaliana GN=PERK7 PE=2 SV=1

 Score = 90.5 bits (223), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 98/187 (52%), Gaps = 10/187 (5%)

Query: 116 QPLPLPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTG-TLRNFPLDEVAAAC 174
           QP+P P       A++  +G   S  +SGP   S P P P    G     F  +E+A+A 
Sbjct: 274 QPMPSPPAPVSGGANVIQSGEMSSNFSSGPYAPSLPPPHPSVALGFNNSTFTYEELASAT 333

Query: 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASL 233
             F  DR + +G    +++    +        E  V  L   S QG +EF  +V  ++ +
Sbjct: 334 QGFSKDRLLGQGGFGYVHKGILPNGK------EIAVKSLKAGSGQGEREFQAEVEIISRV 387

Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
            H +L  L+G+ +  G  QR+L+YE L + +L+  ++G+S G  +DW TR+KIAL +A+G
Sbjct: 388 HHRHLVSLVGYCSNAGG-QRLLVYEFLPNDTLEFHLHGKS-GTVMDWPTRLKIALGSAKG 445

Query: 294 LTFLHEE 300
           L +LHE+
Sbjct: 446 LAYLHED 452

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1

 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 90/167 (53%), Gaps = 17/167 (10%)

Query: 152 LPLPPTGTGTL--RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEAT 209
           L LP  G G +    F   E+AAA  NF  D  + EG    +Y+                
Sbjct: 59  LLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQV-----VA 113

Query: 210 VTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRL 268
           V +L+ +  QG +EF+ +V  L+ L HPNL  L+G+ A DG DQR+L+YE +  GSL+  
Sbjct: 114 VKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCA-DG-DQRLLVYEFMPLGSLEDH 171

Query: 269 IYGRSDGPP----IDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
           ++   D PP    +DWN R+KIA  AA+GL FLH++    VI+  F+
Sbjct: 172 LH---DLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFK 215

Protein kinase required for plant defense mechanism mediated by the disease resistance (R) protein RPS5. In case of infection by Pseudomonas syringae, RPS5 specifically recognizes the avrPphB type III effector avirulence protein and triggers a defense reaction. AvrPphB may trigger RPS5-mediated defense mechanism via the cleavage of PBS1. Both kinase activity and cleavage by avrPphB are independently required to trigger the RPS5-mediated resistance.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
255575572	543	protein kinase atsik, putative [Ricinus	0.943	0.548	0.721	1e-121
356568230	548	PREDICTED: probable receptor-like protei	0.952	0.549	0.755	1e-120
357469007	542	Protein kinase 2A [Medicago truncatula]	0.955	0.557	0.724	1e-119
356532163	549	PREDICTED: probable receptor-like protei	0.952	0.548	0.733	1e-118
388500644	522	unknown [Medicago truncatula]	0.955	0.578	0.721	1e-117
357506663	546	Protein kinase 2A [Medicago truncatula]	0.955	0.553	0.745	1e-116
297735543	660	unnamed protein product [Vitis vinifera]	0.955	0.457	0.719	1e-109
225439687	548	PREDICTED: probable receptor-like protei	0.955	0.551	0.725	1e-109
449502644	548	PREDICTED: probable receptor-like protei	0.952	0.549	0.688	1e-109
449449857	540	PREDICTED: probable receptor-like protei	0.952	0.557	0.688	1e-109

>gi|255575572|ref|XP_002528686.1| protein kinase atsik, putative [Ricinus communis] gi|223531858|gb|EEF33675.1| protein kinase atsik, putative [Ricinus communis]

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 225/312 (72%), Positives = 258/312 (82%), Gaps = 14/312 (4%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLN 60
           MGCFTVLKSKKKKPE +V +KRV+P+E TPTTLPEPQIPTRSLQSAPPSFRTRVKP+  +
Sbjct: 1   MGCFTVLKSKKKKPEPSVSIKRVSPKEQTPTTLPEPQIPTRSLQSAPPSFRTRVKPVQPD 60

Query: 61  NTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPL 120
           N  +  NNR R  SAP SLD+AE  QD LA++E++E EE KSR  L ++  S  PQPLPL
Sbjct: 61  N--RLINNRARVKSAPESLDSAE--QDDLAAIEYDEHEELKSRVSLARDHLS--PQPLPL 114

Query: 121 PSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPP--TGTGTLRNFPLDEVAAACHNFF 178
           P      AA+LK  GS K    SGPL+ASGPLPLPP  T +GTLRNF  DE+ +AC NF 
Sbjct: 115 P------AAALKPAGSLKFTNGSGPLYASGPLPLPPGVTQSGTLRNFSYDEIISACRNFS 168

Query: 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL 238
           SDRC+SEGLSS++YRASFGDD S+SKKFEATVTRL+ S QG KEFIN+VNTLASL+HPNL
Sbjct: 169 SDRCVSEGLSSIIYRASFGDDTSSSKKFEATVTRLHSSPQGFKEFINEVNTLASLRHPNL 228

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
           CKLLG+HARDGS+QRMLIYERL+HGSLDRL+YGR DGPPIDWNTR+KIALCAAQGLTFLH
Sbjct: 229 CKLLGYHARDGSEQRMLIYERLYHGSLDRLLYGRLDGPPIDWNTRMKIALCAAQGLTFLH 288

Query: 299 EEGPFQVIFYYF 310
           EEGPFQ ++  F
Sbjct: 289 EEGPFQAMYNEF 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568230|ref|XP_003552316.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 235/311 (75%), Positives = 267/311 (85%), Gaps = 10/311 (3%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPI-PL 59
           MGCFTVLKSKKKK +   ++K V+  E+ PT LPEPQ  TRSLQSAPPSFRTRVKPI P+
Sbjct: 1   MGCFTVLKSKKKKSDPITYIKHVSHNENVPTVLPEPQTRTRSLQSAPPSFRTRVKPIQPI 60

Query: 60  NNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLP 119
           N   KA+NNRTR LSAPS+LDAAE  QDALAS+E+EEQEES+ RAG  KEQRSSSPQPLP
Sbjct: 61  N---KASNNRTRTLSAPSTLDAAE--QDALASIEYEEQEESRHRAGSMKEQRSSSPQPLP 115

Query: 120 LPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFS 179
           LPSP   SA  LKA GSFKS  +S PL ASGPLPLPPTG+  LRNF  +E+AAACH+F S
Sbjct: 116 LPSPQGGSA--LKAIGSFKSVASSSPLHASGPLPLPPTGS--LRNFLYEEIAAACHHFSS 171

Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
           DRC+SE LSS +Y+ASFGDD S+SKKFEATVTRL+PSSQG+KEFIN+VNTLASLQHPNLC
Sbjct: 172 DRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLC 231

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           KLLGFHAR+GS+ RML+YERL+HGSLDRL+YGRSDGP IDWNTR+KIA+CAAQGLTFLHE
Sbjct: 232 KLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHE 291

Query: 300 EGPFQVIFYYF 310
           EGPFQ ++  F
Sbjct: 292 EGPFQAMYNEF 302

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357469007|ref|XP_003604788.1| Protein kinase 2A [Medicago truncatula] gi|355505843|gb|AES86985.1| Protein kinase 2A [Medicago truncatula]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/312 (72%), Positives = 258/312 (82%), Gaps = 10/312 (3%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLN 60
           MGCFT+LK KKKKP+Q V++KRV+P E +PT LPEPQ  TRSLQSAPPSF+ RVKPI  +
Sbjct: 1   MGCFTILKRKKKKPDQIVYVKRVSPGEDSPTVLPEPQTHTRSLQSAPPSFKIRVKPIQPS 60

Query: 61  NTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPL 120
           N  KATNNR RALSAPSSLD  +AEQDALA++E+EEQE SK R G  KEQRS SPQPLP 
Sbjct: 61  N--KATNNRIRALSAPSSLD--DAEQDALATIEYEEQEGSKYRTGSWKEQRSPSPQPLP- 115

Query: 121 PSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSD 180
             P  +   +LK  GSFK G AS PL+ASGPLPLPP+G+  LRNF  DE+AAAC NF SD
Sbjct: 116 -LPSPKGGGTLKTVGSFKLGIASSPLYASGPLPLPPSGS--LRNFSYDELAAACLNFSSD 172

Query: 181 RCISEGLSSVMYRASFGDDASTS--KKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL 238
           R +SE LSS MY+ASFGDD STS  KKFEATVTRL PSSQG+KEFIN+VNTLASLQHPNL
Sbjct: 173 RYMSESLSSTMYKASFGDDTSTSSSKKFEATVTRLRPSSQGLKEFINEVNTLASLQHPNL 232

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
           C+LLGFHA DGS+ RML+YERL+HGSLDRL+YGRSDGP IDWNTR+KIA+CAA GL+FLH
Sbjct: 233 CRLLGFHAGDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAALGLSFLH 292

Query: 299 EEGPFQVIFYYF 310
           EEGPFQ ++  F
Sbjct: 293 EEGPFQAMYNEF 304

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532163|ref|XP_003534643.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Glycine max]

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/312 (73%), Positives = 264/312 (84%), Gaps = 11/312 (3%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPI-PL 59
           MGCFTVLKSKKK+ +   ++KRV+  E+ PT LPEPQ  TRSLQSAPPSFRTRVKPI P+
Sbjct: 1   MGCFTVLKSKKKRSDPITYVKRVSHNENVPTVLPEPQTHTRSLQSAPPSFRTRVKPIQPI 60

Query: 60  NNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLP 119
           N   K +NNR R LSAPS+LDAAE  QDALAS+E+EEQEES+ RAG  KE RSSSPQPLP
Sbjct: 61  N---KVSNNRARTLSAPSTLDAAE--QDALASIEYEEQEESRHRAGSMKEHRSSSPQPLP 115

Query: 120 LPSPHTQSAASLKATGSFKSGTASGP-LFASGPLPLPPTGTGTLRNFPLDEVAAACHNFF 178
           LPS   Q   +LKA GSFKS T+ G   +ASGPLPLPPTG+  LRNF  +E+AAACH+F 
Sbjct: 116 LPS--PQGGCALKAIGSFKSVTSGGSSYYASGPLPLPPTGS--LRNFLYEEIAAACHHFS 171

Query: 179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL 238
           SDRC+SE LSS +Y+ASFGDD S+SKKFEATVTRL+PSSQG+KEFIN+VNTLASLQHPNL
Sbjct: 172 SDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNL 231

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
           CKLLGFHAR+GS+ RML+YERL+HGSLDRL+YGRSDGP IDWNTR+KIA+CAAQGLTFLH
Sbjct: 232 CKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLH 291

Query: 299 EEGPFQVIFYYF 310
           EEGPFQ ++  F
Sbjct: 292 EEGPFQAMYNEF 303

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500644|gb|AFK38388.1| unknown [Medicago truncatula]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 225/312 (72%), Positives = 256/312 (82%), Gaps = 10/312 (3%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLN 60
           MGCFT+LK KKKKP+  V++KRV+P E +PT LPEPQ  TRSLQSAPPSF+ RVKPI  +
Sbjct: 1   MGCFTILKRKKKKPDPIVYVKRVSPGEDSPTVLPEPQTHTRSLQSAPPSFKIRVKPIQPS 60

Query: 61  NTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPL 120
           N  KATNNR RALSAPSSLD  +AEQDALA++E+EEQE SK R G  KEQRS SPQPLP 
Sbjct: 61  N--KATNNRIRALSAPSSLD--DAEQDALATIEYEEQEGSKYRTGSWKEQRSPSPQPLP- 115

Query: 121 PSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSD 180
             P  +   +LK  GSFK G AS PL+ASGPLPLPPTG+  LRNF  DE+AAAC NF SD
Sbjct: 116 -LPSPKGGGTLKTVGSFKLGIASSPLYASGPLPLPPTGS--LRNFSYDELAAACLNFSSD 172

Query: 181 RCISEGLSSVMYRASFGDDASTS--KKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL 238
           R +SE LSS MY+ASFGDD STS  KKFEATVTR  PSSQG+KEFIN+VNTLASLQHPNL
Sbjct: 173 RYMSESLSSTMYKASFGDDTSTSSSKKFEATVTRRRPSSQGLKEFINEVNTLASLQHPNL 232

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
           C+LLGFHA DGS+ RML+YERL+HGSLDRL+YGRSDGP IDWNTR+KIA+CAA GL+FLH
Sbjct: 233 CRLLGFHAGDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAALGLSFLH 292

Query: 299 EEGPFQVIFYYF 310
           EEGPFQ ++  F
Sbjct: 293 EEGPFQAMYNEF 304

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506663|ref|XP_003623620.1| Protein kinase 2A [Medicago truncatula] gi|355498635|gb|AES79838.1| Protein kinase 2A [Medicago truncatula]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/311 (74%), Positives = 263/311 (84%), Gaps = 9/311 (2%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLN 60
           MGCFTVLKSKKKK +   ++KR++  EH P+ LPEPQ  TRSLQSAPPSFRTRVKPI   
Sbjct: 1   MGCFTVLKSKKKKSDSFAYVKRISHNEHAPSVLPEPQTHTRSLQSAPPSFRTRVKPI--Q 58

Query: 61  NTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLT-KEQRSSSPQPLP 119
           +  KATNNR RALSAPS+LD A+  QDALAS+E+EEQEE K R G + KE RSSSPQPLP
Sbjct: 59  SVNKATNNRIRALSAPSTLDVAD--QDALASIEYEEQEELKHRGGGSMKEPRSSSPQPLP 116

Query: 120 LPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFS 179
           LPS   Q  +SLKA GSFK GTASGPL ASGPLPLPPTG+  LRNFP +EVAAACHNF S
Sbjct: 117 LPS--PQGGSSLKAIGSFKLGTASGPLHASGPLPLPPTGS--LRNFPYEEVAAACHNFSS 172

Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
           DRC+SE LSS +Y+A FGDD S SKKFEATVTRL+PSSQG+KEFIN+VNTLA+LQHPNLC
Sbjct: 173 DRCMSECLSSTIYKAYFGDDPSNSKKFEATVTRLHPSSQGLKEFINEVNTLATLQHPNLC 232

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           KLLGFHARDGS+ +ML+YERL+HGSLDRL+YGRSDGP IDWNTR+KIA+CAA GLTFLHE
Sbjct: 233 KLLGFHARDGSEHKMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAMCAAHGLTFLHE 292

Query: 300 EGPFQVIFYYF 310
           EGPFQ ++  F
Sbjct: 293 EGPFQAMYNEF 303

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735543|emb|CBI18037.3| unnamed protein product [Vitis vinifera]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/310 (71%), Positives = 258/310 (83%), Gaps = 8/310 (2%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLN 60
           MGCF VLKSKKKK E+T ++KR+NPQE TPTTLPEP++ +R+LQSAPPSFRT VKP+   
Sbjct: 113 MGCFKVLKSKKKKAERTAYIKRINPQELTPTTLPEPKLQSRTLQSAPPSFRTLVKPV--Q 170

Query: 61  NTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPL 120
              +  N+RTRALSAPSSL+  E  QDALAS E EEQEE KSR GLTKEQRS +PQPLP 
Sbjct: 171 PVKRIINSRTRALSAPSSLNTTE--QDALASNECEEQEELKSRVGLTKEQRSPNPQPLP- 227

Query: 121 PSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSD 180
             P  Q    LKATGSFK+G ASGPL+AS   PLP    G LRNF  +E++ AC NF SD
Sbjct: 228 -LPSPQGTVVLKATGSFKAGNASGPLYAS--GPLPLPPLGALRNFGYEELSNACLNFSSD 284

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           RC+SEGLSS++Y+ASFGDDAS SKK EATVTRL+PS+QG+KEFIN+VNTLASLQHP+LCK
Sbjct: 285 RCVSEGLSSIIYKASFGDDASGSKKLEATVTRLHPSTQGLKEFINEVNTLASLQHPHLCK 344

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           LLGFHAR+GSDQRML+YERL+HGSLDRL+YGRSDGP IDWNTR+K+ALCAAQGLTFLHEE
Sbjct: 345 LLGFHAREGSDQRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKVALCAAQGLTFLHEE 404

Query: 301 GPFQVIFYYF 310
           GPFQ ++  F
Sbjct: 405 GPFQAMYNEF 414

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439687|ref|XP_002271567.1| PREDICTED: probable receptor-like protein kinase At5g15080 [Vitis vinifera]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 225/310 (72%), Positives = 260/310 (83%), Gaps = 8/310 (2%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPIPLN 60
           MGCF VLKSKKKK E+T ++KR+NPQE TPTTLPEP++ +R+LQSAPPSFRT VKP+   
Sbjct: 1   MGCFKVLKSKKKKAERTAYIKRINPQELTPTTLPEPKLQSRTLQSAPPSFRTLVKPV--Q 58

Query: 61  NTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLPL 120
              +  N+RTRALSAPSSL+  E  QDALAS E EEQEE KSR GLTKEQRS +PQPLP 
Sbjct: 59  PVKRIINSRTRALSAPSSLNTTE--QDALASNECEEQEELKSRVGLTKEQRSPNPQPLP- 115

Query: 121 PSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSD 180
             P  Q    LKATGSFK+G ASGPL+ASGPLPL     G LRNF  +E++ AC NF SD
Sbjct: 116 -LPSPQGTVVLKATGSFKAGNASGPLYASGPLPL--PPLGALRNFGYEELSNACLNFSSD 172

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           RC+SEGLSS++Y+ASFGDDAS SKK EATVTRL+PS+QG+KEFIN+VNTLASLQHP+LCK
Sbjct: 173 RCVSEGLSSIIYKASFGDDASGSKKLEATVTRLHPSTQGLKEFINEVNTLASLQHPHLCK 232

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           LLGFHAR+GSDQRML+YERL+HGSLDRL+YGRSDGP IDWNTR+K+ALCAAQGLTFLHEE
Sbjct: 233 LLGFHAREGSDQRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKVALCAAQGLTFLHEE 292

Query: 301 GPFQVIFYYF 310
           GPFQ ++  F
Sbjct: 293 GPFQAMYNEF 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449502644|ref|XP_004161702.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Cucumis sativus]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/311 (68%), Positives = 250/311 (80%), Gaps = 10/311 (3%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPI-PL 59
           MGCF  LKSKKK   Q++H K V  +E  PT LPEPQI TR+LQSAPPSF+TRVKP+ P 
Sbjct: 1   MGCFPALKSKKKNYSQSLHDKCVKSKEIVPTKLPEPQIRTRTLQSAPPSFKTRVKPVQPA 60

Query: 60  NNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLP 119
           N    A  +R R LSAPSSLDAAE  QDAL+SVE+EE EE   R G +KEQRS SPQPLP
Sbjct: 61  NG---AAGSRVRTLSAPSSLDAAE--QDALSSVEYEEPEEPIGRFGFSKEQRSPSPQPLP 115

Query: 120 LPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFS 179
           LPSP      +LK TGSFKS  +SGPL++SGPLPLPP G   +RNF  +E++AACHNF +
Sbjct: 116 LPSPQV--IVALKNTGSFKSVASSGPLYSSGPLPLPPVGA--VRNFSYEEISAACHNFSA 171

Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
           + C+SE LSS++YRASFGDD STSKKFEATVT  +PS+QG +EF+++V+TL SLQHPNLC
Sbjct: 172 ESCVSESLSSLIYRASFGDDTSTSKKFEATVTFRHPSNQGFREFVSEVSTLTSLQHPNLC 231

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           KLLGFH  +GS QRML+YERLFHGSLDRL+YGRSDGPPIDWNTR+KIALCAAQGLTFLHE
Sbjct: 232 KLLGFHGHEGSGQRMLVYERLFHGSLDRLLYGRSDGPPIDWNTRIKIALCAAQGLTFLHE 291

Query: 300 EGPFQVIFYYF 310
           EGPFQ ++  F
Sbjct: 292 EGPFQAMYNEF 302

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449449857|ref|XP_004142681.1| PREDICTED: probable receptor-like protein kinase At5g15080-like [Cucumis sativus]

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/311 (68%), Positives = 250/311 (80%), Gaps = 10/311 (3%)

Query: 1   MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEPQIPTRSLQSAPPSFRTRVKPI-PL 59
           MGCF  LKSKKK   Q++H K V  +E  PT LPEPQI TR+LQSAPPSF+TRVKP+ P 
Sbjct: 1   MGCFPALKSKKKNYSQSLHDKCVKSKEIVPTKLPEPQIRTRTLQSAPPSFKTRVKPVQPA 60

Query: 60  NNTTKATNNRTRALSAPSSLDAAEAEQDALASVEFEEQEESKSRAGLTKEQRSSSPQPLP 119
           N    A  +R R LSAPSSLDAAE  QDAL+SVE+EE EE   R G +KEQRS SPQPLP
Sbjct: 61  NG---AAGSRVRTLSAPSSLDAAE--QDALSSVEYEEPEEPIGRFGFSKEQRSPSPQPLP 115

Query: 120 LPSPHTQSAASLKATGSFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFS 179
           LPSP      +LK TGSFKS  +SGPL++SGPLPLPP G   +RNF  +E++AACHNF +
Sbjct: 116 LPSPQV--IVALKNTGSFKSVASSGPLYSSGPLPLPPVGA--VRNFSYEEISAACHNFSA 171

Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
           + C+SE LSS++YRASFGDD STSKKFEATVT  +PS+QG +EF+++V+TL SLQHPNLC
Sbjct: 172 ESCVSESLSSLIYRASFGDDTSTSKKFEATVTFRHPSNQGFREFVSEVSTLTSLQHPNLC 231

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           KLLGFH  +GS QRML+YERLFHGSLDRL+YGRSDGPPIDWNTR+KIALCAAQGLTFLHE
Sbjct: 232 KLLGFHGHEGSGQRMLVYERLFHGSLDRLLYGRSDGPPIDWNTRIKIALCAAQGLTFLHE 291

Query: 300 EGPFQVIFYYF 310
           EGPFQ ++  F
Sbjct: 292 EGPFQAMYNEF 302

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	316
TAIR|locus:2077768	557	ATSIK [Arabidopsis thaliana (t	0.955	0.542	0.526	1.4e-73
TAIR|locus:2064920	435	AT2G39110 [Arabidopsis thalian	0.563	0.409	0.329	8.9e-20
TAIR|locus:2180127	389	NAK [Arabidopsis thaliana (tax	0.458	0.372	0.371	1.1e-19
TAIR|locus:2151191	378	CDL1 "CDG1-like 1" [Arabidopsi	0.436	0.365	0.414	8e-19
TAIR|locus:2147805	493	AT5G15080 [Arabidopsis thalian	0.458	0.294	0.363	1e-18
TAIR|locus:2053250	462	AT2G28940 [Arabidopsis thalian	0.465	0.318	0.394	1.1e-18
TAIR|locus:2095517	453	AT3G28690 [Arabidopsis thalian	0.547	0.381	0.329	2.2e-18
TAIR|locus:2100282	490	AT3G01300 [Arabidopsis thalian	0.458	0.295	0.363	3.6e-18
TAIR|locus:2085069	418	AT3G09830 [Arabidopsis thalian	0.468	0.354	0.368	7.7e-18
TAIR|locus:2060167	442	AT2G07180 [Arabidopsis thalian	0.439	0.314	0.369	9.3e-18

TAIR|locus:2077768 ATSIK [Arabidopsis thaliana (taxid:3702)]

 Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
 Identities = 167/317 (52%), Positives = 203/317 (64%)

Query:     1 MGCFTVLKSKKKKPEQTVHLKRVNPQEHTPTTLPEP-QIPTRSLQSAPPSFRTRVKPIPL 59
             +GCF  LKSKKK+   +V +KR++ +E  PT LPEP +IP+R+LQSAPPSFRTRVKPI  
Sbjct:     3 LGCFP-LKSKKKRG--SVSMKRLDLEESKPTALPEPPKIPSRNLQSAPPSFRTRVKPIQS 59

Query:    60 XXXXXXXXXXXXX-LSAPXXXXXXXXXXXXXXSVEFEEQEESKSRAGLTKEQRXXXXXXX 118
                           +SAP                  E+ E+ +     TKE         
Sbjct:    60 NNGGTGEMSSRARVMSAPSSIHGAAERDLLAGVYHDEQDEQPRDPRTSTKES-----SPQ 114

Query:   119 XXXXXXXXXAASLKATGSFKS-GTASGPLFASXXXXXXXXX--XXXXRNFPLDEVAAACH 175
                       +SLK  GSFKS   +SG L +S               R+F  DEV AAC+
Sbjct:   115 PLPLPSPRTGSSLKNWGSFKSFNGSSGRLSSSAAVSGPLPLPPSGSVRSFSYDEVMAACN 174

Query:   176 NFFSDRCISEGLSSVMYRASFGDDASTS--KKFEATVTRLNPSSQGVKEFINDVNTLASL 233
              F SDRC+ EGLSSVMY ASFGD+ASTS  KK +ATV RL+  +Q ++EFIN+VNTLASL
Sbjct:   175 AFSSDRCVMEGLSSVMYMASFGDEASTSGLKKVDATVVRLHVITQSIREFINEVNTLASL 234

Query:   234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
             QH NLCKL+G+HARDGSD RML+YERL  GSLDRL++GRSDGPP+DWNTR+KIALCAAQG
Sbjct:   235 QHQNLCKLVGYHARDGSDTRMLVYERLALGSLDRLLHGRSDGPPLDWNTRMKIALCAAQG 294

Query:   294 LTFLHEEGPFQVIFYYF 310
             LTFLHEEGPFQ ++  F
Sbjct:   295 LTFLHEEGPFQAMYNEF 311

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006914 "autophagy" evidence=RCA

TAIR|locus:2064920 AT2G39110 [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 8.9e-20, P = 8.9e-20
 Identities = 60/182 (32%), Positives = 94/182 (51%)

Query:   134 TGS-FKSGTASGPLFASXXXXXXXXXXXXXRNFPLDEVAAACHNFFSDRCISEGLSSVMY 192
             +GS F S T++     S             + F LD++  A  NF     I EG    ++
Sbjct:    46 SGSEFNSDTSTATSITSSLHVLSETHSNNLKVFVLDDLKTATKNFSRSLMIGEGGFGGVF 105

Query:   193 RASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD 251
             R    +   + KK +  V +L+    QG KE++ +VN L  ++HPNL KL+G+ A D   
Sbjct:   106 RGVIQNPQDSRKKIDIAVKQLSRRGLQGHKEWVTEVNVLGVVEHPNLVKLIGYCAEDDER 165

Query:   252 --QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY 309
               QR+L+YE + + S+   +  R    P+ W+TR+KIA   A+GL +LH+   FQ+IF  
Sbjct:   166 GIQRLLVYEYVQNRSVQDHLSNRFIVTPLPWSTRLKIAQDTARGLAYLHQGMEFQIIFRD 225

Query:   310 FE 311
             F+
Sbjct:   226 FK 227

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2180127 NAK [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 1.1e-19, P = 1.1e-19
 Identities = 58/156 (37%), Positives = 89/156 (57%)

Query:   163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEAT-----VTRLNPSS 217
             +NF L E+ +A  NF  D  + EG    +++    D++S +     T     V RLN   
Sbjct:    54 KNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWI-DESSLAPSKPGTGIVIAVKRLNQEG 112

Query:   218 -QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG- 275
              QG +E++ ++N L  L HPNL KL+G+   +  + R+L+YE +  GSL+  ++ R    
Sbjct:   113 FQGHREWLAEINYLGQLDHPNLVKLIGYCLEE--EHRLLVYEFMTRGSLENHLFRRGTFY 170

Query:   276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
              P+ WNTRV++AL AA+GL FLH   P QVI+  F+
Sbjct:   171 QPLSWNTRVRMALGAARGLAFLHNAQP-QVIYRDFK 205

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

TAIR|locus:2151191 CDL1 "CDG1-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 8.0e-19, P = 8.0e-19
 Identities = 61/147 (41%), Positives = 90/147 (61%)

Query:   163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVK 221
             + F   E+A A  NF  +  I EG    +Y+   G  ASTS+   A + +L+ +  QG +
Sbjct:    59 QTFTFSELATATRNFRKECLIGEGGFGRVYK---GYLASTSQT--AAIKQLDHNGLQGNR 113

Query:   222 EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP-PIDW 280
             EF+ +V  L+ L HPNL  L+G+ A DG DQR+L+YE +  GSL+  ++  S G  P+DW
Sbjct:   114 EFLVEVLMLSLLHHPNLVNLIGYCA-DG-DQRLLVYEYMPLGSLEDHLHDISPGKQPLDW 171

Query:   281 NTRVKIALCAAQGLTFLHEEGPFQVIF 307
             NTR+KIA  AA+GL +LH++    VI+
Sbjct:   172 NTRMKIAAGAAKGLEYLHDKTMPPVIY 198

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:1900459 "positive regulation of brassinosteroid mediated signaling pathway" evidence=IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2147805 AT5G15080 [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 1.0e-18, P = 1.0e-18
 Identities = 56/154 (36%), Positives = 88/154 (57%)

Query:   163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS- 217
             R F  +++  +  NF  +  + EG    +++    ++ +   K        V  LNP   
Sbjct:   128 RKFTFNDLKLSTRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNPDGL 187

Query:   218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP 277
             QG KE++ ++N L +L HPNL KL+G+   D  DQR+L+YE +  GSL+  ++ RS   P
Sbjct:   188 QGHKEWLAEINFLGNLLHPNLVKLVGYCIED--DQRLLVYEFMPRGSLENHLFRRS--LP 243

Query:   278 IDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
             + W+ R+KIAL AA+GL+FLHEE    VI+  F+
Sbjct:   244 LPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFK 277

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2053250 AT2G28940 [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 60/152 (39%), Positives = 79/152 (51%)

Query:   165 FPLDEVAAACHNFFSDRCISEGLSSVMYRA--SFGDDASTSKKFEATVTRLNPSS-QGVK 221
             F   E+  A   F     I EG    +YR      D      K    V +LN    QG K
Sbjct:    90 FTFKELKIATKGFNRGLLIGEGGFGCVYRGVVDVSDSNGFDSKINVAVKQLNRQGLQGHK 149

Query:   222 EFINDVNTLASLQHPNLCKLLGFHARDGSD--QRMLIYERLFHGSLDRLIYGRSDGPPID 279
             E+IN+VN L  + HPNL KL+G+ A D     QR+L+YE + + SL+  + GR     + 
Sbjct:   150 EWINEVNFLGVVNHPNLVKLVGYCADDDERGMQRLLVYELMCNKSLEDHLVGRVVSVSLP 209

Query:   280 WNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
             W  R+KIA  AAQGL +LHEE  FQ+IF  F+
Sbjct:   210 WMMRLKIAQDAAQGLAYLHEEMDFQLIFRDFK 241

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2095517 AT3G28690 [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 62/188 (32%), Positives = 100/188 (53%)

Query:   129 ASLKATGSFKSGTASGPLFASXXXXXXXXXXXXXRNFPLDEVAAACHNFFSDRCISEGLS 188
             A  K TG  +SG+++ PL +              R F  +++  A  NF  +  + EG  
Sbjct:    61 APTKDTGCAESGSST-PLMSGELKYSSKL-----RIFMFNDLKLATRNFRPESLLGEGGF 114

Query:   189 SVMYRASFGDDASTSKK----FEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLG 243
               +++    ++ +   K        V  LNP   QG KE++ ++N L +L HP+L KL+G
Sbjct:   115 GCVFKGWIEENGTAPVKPGTGLTVAVKTLNPDGLQGHKEWLAEINFLGNLVHPSLVKLVG 174

Query:   244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPF 303
             +   +  DQR+L+YE +  GSL+  ++ R+   P+ W+ R+KIAL AA+GL FLHEE   
Sbjct:   175 YCMEE--DQRLLVYEFMPRGSLENHLFRRT--LPLPWSVRMKIALGAAKGLAFLHEEAEK 230

Query:   304 QVIFYYFE 311
              VI+  F+
Sbjct:   231 PVIYRDFK 238

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2100282 AT3G01300 [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 56/154 (36%), Positives = 87/154 (56%)

Query:   163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKK----FEATVTRLNPSS- 217
             + F   ++  A  NF  +  + EG    +++    ++ +   K        V  LNP   
Sbjct:   122 KKFSFIDLKLATRNFRPESLLGEGGFGCVFKGWVEENGTAPVKPGTGLTVAVKTLNPDGL 181

Query:   218 QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPP 277
             QG KE++ ++N L +L HPNL KL+G+   D  DQR+L+YE +  GSL+  ++ RS   P
Sbjct:   182 QGHKEWLAEINYLGNLLHPNLVKLVGYCIED--DQRLLVYEFMPRGSLENHLFRRS--LP 237

Query:   278 IDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
             + W+ R+KIAL AA+GL+FLHEE    VI+  F+
Sbjct:   238 LPWSIRMKIALGAAKGLSFLHEEALKPVIYRDFK 271

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2085069 AT3G09830 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 7.7e-18, P = 7.7e-18
 Identities = 56/152 (36%), Positives = 87/152 (57%)

Query:   163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVK 221
             R F + ++ +A  NF     I EG    ++R +  +   +S K E  V +L     QG K
Sbjct:    70 REFSITDLKSATKNFSRSVMIGEGGFGCVFRGTVRNLEDSSVKIEVAVKQLGKRGLQGHK 129

Query:   222 EFINDVNTLASLQHPNLCKLLGFHARDGSD--QRMLIYERLFHGSLDRLIYGRSDGPPID 279
             E++ +VN L  ++H NL KLLG+ A D     QR+L+YE + + S++  +  RS    + 
Sbjct:   130 EWVTEVNFLGIVEHTNLVKLLGYCAEDDERGIQRLLVYEYMPNRSVEFHLSPRSL-TVLT 188

Query:   280 WNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE 311
             W+ R++IA  AA+GLT+LHEE  FQ+IF  F+
Sbjct:   189 WDLRLRIAQDAARGLTYLHEEMEFQIIFRDFK 220

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

TAIR|locus:2060167 AT2G07180 [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 9.3e-18, P = 9.3e-18
 Identities = 54/146 (36%), Positives = 79/146 (54%)

Query:   165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTS-KKFEATVTRLNPSS-QGVKE 222
             F  +E+  A   F  D  + EG   V+Y+    +      K  +  +  LNP   QG +E
Sbjct:    78 FTYEEMKIATKQFRPDYILGEGGFGVVYKGVIDESVRVGFKSTKVAIKELNPEGFQGDRE 137

Query:   223 FINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNT 282
             ++ +VN L  L HPNL KL+G+   D  D R+L+YE +  GSL++ ++ R  G  + W  
Sbjct:   138 WLAEVNYLGQLSHPNLVKLIGYCCED--DHRLLVYEYMAMGSLEKHLFRRV-GCTLTWTK 194

Query:   283 RVKIALCAAQGLTFLHEEGPFQVIFY 308
             R+KIAL AA+GL FLH  G  + I Y
Sbjct:   195 RMKIALDAAKGLAFLH--GAERSIIY 218

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037493001 SubName- Full=Chromosome chr8 scaffold_88, whole genome shotgun sequence; (548 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	316
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	5e-12
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-08
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-07
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	1e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	7e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.002
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	0.003

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 63.8 bits (156), Expect = 5e-12
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%)

Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLL 242
           + EG    +Y A    D  T KK    + +   SS  ++E + ++  L  L HPN+ KL 
Sbjct: 1   LGEGGFGTVYLAR---DKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLY 57

Query: 243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           G    +  +   L+ E    GSL  L+  + +   +  +  ++I L   +GL +LH  G
Sbjct: 58  GVFEDE--NHLYLVMEYCEGGSLKDLL--KENEGKLSEDEILRILLQILEGLEYLHSNG 112

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           S +  +EF+ + + +  L HPN+ +LLG   +       ++ E +  G L    + R  G
Sbjct: 41  SEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGE--PLYIVTEYMPGGDLLD--FLRKHG 96

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             +     +++AL  A+G+ +L  
Sbjct: 97  EKLTLKDLLQMALQIAKGMEYLES 120

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 54.5 bits (132), Expect = 2e-08
 Identities = 19/94 (20%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 212 RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD----- 266
           + + S +  K+F+ +   +  L HPN+ +LLG    +      L+ E +  G L      
Sbjct: 32  KEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEP--LYLVLEYMEGGDLLDYLRK 89

Query: 267 -RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
            R ++   +   +     +  A+  A+G+ +L  
Sbjct: 90  SRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS 123

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.4 bits (129), Expect = 3e-08
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 11/123 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEA--TVTRLNPSSQGVKEFINDVNTLASLQHPNL 238
           R +  G    +Y+A       T K   A   + + +  S+  +    ++  L  L HPN+
Sbjct: 5   RKLGSGSFGTVYKAK---HKGTGKIV-AVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
            +L+        D   L+ E    G L   +   S G P+  +   KIAL   +GL +LH
Sbjct: 61  VRLIDAFEDK--DHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKIALQILRGLEYLH 115

Query: 299 EEG 301
             G
Sbjct: 116 SNG 118

Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 53.3 bits (129), Expect = 3e-08
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 212 RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG 271
           + + S Q ++EF+ +   +  L HPN+ KLLG    +  +   ++ E +  G L   +  
Sbjct: 37  KEDASEQQIEEFLREARIMRKLDHPNVVKLLGV-CTE-EEPLYIVMEYMEGGDLLSYL-- 92

Query: 272 RSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           R + P +  +  +  AL  A+G+ +L  + 
Sbjct: 93  RKNRPKLSLSDLLSFALQIARGMEYLESKN 122

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 51.0 bits (123), Expect = 2e-07
 Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 212 RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG 271
           + + S Q ++EF+ +   +  L HPN+ KLLG    +  +  M++ E +  G L   +  
Sbjct: 37  KEDASEQQIEEFLREARIMRKLDHPNIVKLLGV-CTE-EEPLMIVMEYMPGGDLLDYL-R 93

Query: 272 RSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           ++    +  +  +  AL  A+G+ +L  + 
Sbjct: 94  KNRPKELSLSDLLSFALQIARGMEYLESKN 123

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 201 STSKKFEATVTRLNPSSQGVKEFI-NDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER 259
                 E  +  +   S+  KE I N++  L   +HPN+ K  G + +   D+  ++ E 
Sbjct: 21  HKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELWIVMEF 78

Query: 260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
              GSL  L+  +S    +  +    +     +GL +LH  G
Sbjct: 79  CSGGSLKDLL--KSTNQTLTESQIAYVCKELLKGLEYLHSNG 118

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 7/113 (6%)

Query: 191 MYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARD 248
           + R     D +     +  V  LN S   Q   +F  ++  L +L H N+ K  G   + 
Sbjct: 22  LCRYDPLGDNTGE---QVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP 78

Query: 249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           G     LI E L  GSL    Y +     I+    +  +    +G+ +L  + 
Sbjct: 79  GGRSLRLIMEYLPSGSLR--DYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR 129

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 40.2 bits (95), Expect = 7e-04
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             + EG    +Y A    D  T K     V +     +  +  + ++  L  L+HPN+ +
Sbjct: 5   EKLGEGSFGKVYLAR---DKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVR 61

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L      +  D+  L+ E    G L  L+        +  +            L +LH +
Sbjct: 62  LYDVF--EDEDKLYLVMEYCEGGDLFDLL---KKRGRLSEDEARFYLRQILSALEYLHSK 116

Query: 301 G 301
           G
Sbjct: 117 G 117

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 210 VTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLI 269
           V R   S +  KE +++   +AS+ HP++ +LLG      S Q  LI + +  G L    
Sbjct: 43  VLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL---SSQVQLITQLMPLGCLLD-- 97

Query: 270 YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           Y R+    I     +   +  A+G+++L E+ 
Sbjct: 98  YVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 38.2 bits (89), Expect = 0.003
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 17/90 (18%)

Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP---- 276
           K+F  +   L + QH N+ K  G       D  ++++E + HG L++ +  RS GP    
Sbjct: 53  KDFEREAELLTNFQHENIVKFYGVCTE--GDPPIMVFEYMEHGDLNKFL--RSHGPDAAF 108

Query: 277 ---------PIDWNTRVKIALCAAQGLTFL 297
                     +  +  ++IA+  A G+ +L
Sbjct: 109 LKSPDSPMGELTLSQLLQIAVQIASGMVYL 138

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	316
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.96
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.94
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.94
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.94
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.92
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.92
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.92
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.92
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.91
KOG0610	459	consensus Putative serine/threonine protein kinase	99.91
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.91
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.91
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.91
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.9
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.9
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.9
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.9
KOG0605	550	consensus NDR and related serine/threonine kinases	99.9
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.89
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.89
KOG0198	313	consensus MEKK and related serine/threonine protei	99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.89
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.89
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.89
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.89
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.89
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.89
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.88
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.88
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.88
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.88
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.88
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.88
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.88
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.88
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.88
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.88
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.88
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.88
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.88
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.88
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.88
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.88
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.87
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.87
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.87
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.87
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.87
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.87
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.87
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.87
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.87
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.87
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.87
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.87
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.87
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.87
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.87
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.87
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.87
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.87
KOG0584	632	consensus Serine/threonine protein kinase [General	99.87
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.87
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.87
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.87
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.87
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.87
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.86
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.86
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.86
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.86
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.86
PTZ00284	467	protein kinase; Provisional	99.86
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.86
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.86
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.86
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.86
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.86
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.86
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.86
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.86
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.86
PHA02988	283	hypothetical protein; Provisional	99.86
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.86
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.86
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.86
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.86
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.86
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.86
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.86
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.85
KOG0578	550	consensus p21-activated serine/threonine protein k	99.85
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.85
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.85
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.85
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.85
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.85
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.85
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.85
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.85
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.85
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.85
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.85
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.85
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.85
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.85
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.85
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.85
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.85
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.85
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.85
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.85
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.85
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.85
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.85
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.85
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.85
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.85
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.85
PTZ00267	478	NIMA-related protein kinase; Provisional	99.85
PHA03212	391	serine/threonine kinase US3; Provisional	99.85
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.85
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.85
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.85
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.85
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.85
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.85
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.85
PHA03211	461	serine/threonine kinase US3; Provisional	99.85
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.85
KOG0589	426	consensus Serine/threonine protein kinase [General	99.85
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.85
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.85
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.84
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.84
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.84
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.84
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.84
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.84
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.84
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.84
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.84
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.84
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.84
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.84
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.84
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.84
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.84
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.84
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.84
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.84
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.84
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.84
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.84
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.84
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.84
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.84
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.84
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.84
PHA03209	357	serine/threonine kinase US3; Provisional	99.84
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.84
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.84
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.84
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.84
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.84
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.84
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.84
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.84
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.84
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.84
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.84
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.84
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.84
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.84
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.84
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.83
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.83
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.83
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.83
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.83
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.83
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.83
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.83
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.83
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.83
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.83
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.83
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.83
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.83
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.83
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.83
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.83
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.83
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.83
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.83
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.83
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.83
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.83
KOG0586	596	consensus Serine/threonine protein kinase [General	99.83
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.83
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.83
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.83
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.83
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.83
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.83
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.83
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.83
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.83
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.83
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.83
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.83
PTZ00036	440	glycogen synthase kinase; Provisional	99.83
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.82
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.82
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.82
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.82
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.82
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.82
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.82
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.82
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.82
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.82
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.82
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.82
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.82
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.82
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.82
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.82
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.82
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.82
PTZ00283	496	serine/threonine protein kinase; Provisional	99.82
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.82
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.82
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.82
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.82
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.82
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.82
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.82
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.82
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.82
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.82
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.82
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.82
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.82
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.82
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.82
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.82
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.82
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.82
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.82
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.82
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.82
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.82
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.81
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.81
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.81
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.81
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.81
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.81
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.81
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.81
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.81
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.81
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.81
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.81
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.81
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.81
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.81
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.81
PHA03210	501	serine/threonine kinase US3; Provisional	99.81
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.81
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.81
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.81
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.81
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.81
KOG3653	534	consensus Transforming growth factor beta/activin	99.81
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.81
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.81
PHA03207	392	serine/threonine kinase US3; Provisional	99.81
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.81
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.8
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.8
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.8
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.8
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.8
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.8
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.8
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.8
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.8
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.8
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.8
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.8
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.8
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.8
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.8
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.8
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.8
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.8
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.8
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.79
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.79
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.79
PLN00009	294	cyclin-dependent kinase A; Provisional	99.79
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.79
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.79
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.79
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.79
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.79
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.79
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.79
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.79
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.79
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.79
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.79
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.79
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.79
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.78
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.78
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.78
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.78
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.78
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.78
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.78
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.78
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.78
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.78
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.78
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.78
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.78
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.78
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.78
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.77
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.77
PRK09188	365	serine/threonine protein kinase; Provisional	99.77
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.77
PRK10345	210	hypothetical protein; Provisional	99.77
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.77
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.77
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.77
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.77
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.77
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.77
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.77
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.77
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.76
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.76
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.76
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.76
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.76
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.76
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.76
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.76
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.76
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.76
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.76
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.76
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.75
KOG1152	772	consensus Signal transduction serine/threonine kin	99.75
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.75
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.75
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.75
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.75
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.75
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.75
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.74
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.74
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.74
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.74
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.73
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.73
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.73
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.73
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.73
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.72
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.72
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.72
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.71
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.7
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.7
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.7
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.69
PHA02882	294	putative serine/threonine kinase; Provisional	99.68
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.68
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.68
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.67
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.67
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.67
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.67
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.66
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.66
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.66
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.65
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.63
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.63
PRK14879	211	serine/threonine protein kinase; Provisional	99.63
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.61
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.6
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.6
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.59
smart00090	237	RIO RIO-like kinase.	99.59
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.59
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.59
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.57
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.57
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.56
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.55
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.54
PRK12274	218	serine/threonine protein kinase; Provisional	99.54
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.5
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.47
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.45
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.43
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.4
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.39
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.38
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.36
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.32
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.07
PLN00181	793	protein SPA1-RELATED; Provisional	99.02
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.01
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.0
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.97
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.94
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.82
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.82
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.75
KOG3087	229	consensus Serine/threonine protein kinase [General	98.64
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.64
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.63
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.47
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.38
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.34
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.33
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	98.21
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.14
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.08
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.07
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.94
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	97.91
KOG1243	690	consensus Protein kinase [General function predict	97.9
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.79
PRK09902	216	hypothetical protein; Provisional	97.71
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.7
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.68
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.6
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.55
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.49
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.23
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.13
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.07
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.05
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.02
PRK10593	297	hypothetical protein; Provisional	96.95
PLN02876	822	acyl-CoA dehydrogenase	96.93
PF01636	239	APH: Phosphotransferase enzyme family This family	96.76
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.56
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.24
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.75
KOG0606	1205	consensus Microtubule-associated serine/threonine	95.7
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.66
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.54
KOG0576	829	consensus Mitogen-activated protein kinase kinase	94.32
PRK05231	319	homoserine kinase; Provisional	94.23
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.02
PRK09550	401	mtnK methylthioribose kinase; Reviewed	92.67
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	91.72
KOG2270	520	consensus Serine/threonine protein kinase involved	90.93
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	90.93
PLN02756	418	S-methyl-5-thioribose kinase	89.89
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	87.56
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	86.34
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	85.3
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	83.79
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	82.92
PRK12396	409	5-methylribose kinase; Reviewed	82.28
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	81.94
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	81.19
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	81.15

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-33  Score=261.45  Aligned_cols=147  Identities=39%  Similarity=0.659  Sum_probs=133.1

Q ss_pred             CccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh-hHhHHHHHHHHHhCCCCCcc
Q 021173          161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLC  239 (316)
Q Consensus       161 ~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~HpnIv  239 (316)
                      ..+.|+++|+..+|++|...++||+|+||.||+|.+.++..      ||||++...... ..+|.+|+.+|.+++|+|||
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~------vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv  134 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTV------VAVKRLSSNSGQGEREFLNEVEILSRLRHPNLV  134 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCE------EEEEEecCCCCcchhHHHHHHHHHhcCCCcCcc
Confidence            56789999999999999999999999999999999999743      899988754443 66799999999999999999


Q ss_pred             eeeeEEEcCCCC-eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          240 KLLGFHARDGSD-QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       240 ~l~g~~~~~~~~-~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|+|||.+.  + ..+||||||++|+|.++|+..... .++|..|++||.++|+||+|||+....+|||||||++||+
T Consensus       135 ~LlGyC~e~--~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNIL  209 (361)
T KOG1187|consen  135 KLLGYCLEG--GEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNIL  209 (361)
T ss_pred             cEEEEEecC--CceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHee
Confidence            999999985  5 599999999999999999987533 7899999999999999999999987668999999999995

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=2.4e-29  Score=226.96  Aligned_cols=131  Identities=23%  Similarity=0.326  Sum_probs=116.6

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ...+|...+.||+|+||+||+|+++..+.     .||||.+..   .....+-+..|+.+|+.++|+|||.|++++.+. 
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~-----~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-   81 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGT-----EVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-   81 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCc-----eEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-
Confidence            34678788889999999999999987775     488888864   344566689999999999999999999999984 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+|||||||.||||.+||+.++   .+++.++..++.|+|.||++||++   +||||||||+||+
T Consensus        82 -~~i~lVMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiL  141 (429)
T KOG0595|consen   82 -DFIYLVMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNIL  141 (429)
T ss_pred             -CeEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEE
Confidence             89999999999999999999875   499999999999999999999995   7999999999995

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.96  E-value=3.5e-28  Score=228.46  Aligned_cols=134  Identities=25%  Similarity=0.313  Sum_probs=118.0

Q ss_pred             CCccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC---CCchhhHhHHHHHHHHHhCCCC
Q 021173          160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHP  236 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~Hp  236 (316)
                      ...+.+.++|+...       ..||+|.||+||+|.|.++        ||||.++   ...+..+.|.+|+.+|++.+|.
T Consensus       384 ~~~WeIp~~ev~l~-------~rIGsGsFGtV~Rg~whGd--------VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~  448 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLG-------ERIGSGSFGTVYRGRWHGD--------VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE  448 (678)
T ss_pred             ccccccCHHHhhcc-------ceeccccccceeecccccc--------eEEEEEecCCCCHHHHHHHHHHHHHHhhcchh
Confidence            35566666666655       8999999999999999987        8999887   3556788999999999999999


Q ss_pred             CcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       237 nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+-++|||..   ..++||+.||+|.+|+.+|+...  ..|+..+.+.||.|||+||.|||.   ++|||||||..||.
T Consensus       449 NIlLFMG~~~~---p~~AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIF  520 (678)
T KOG0193|consen  449 NILLFMGACMN---PPLAIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIF  520 (678)
T ss_pred             hheeeehhhcC---CceeeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceE
Confidence            99999999997   45599999999999999999864  359999999999999999999999   57999999999983

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.94  E-value=9.4e-27  Score=215.63  Aligned_cols=126  Identities=22%  Similarity=0.400  Sum_probs=109.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.||+|+||+||+|.|.+...      |++|.+....   ...+.|.+|+.+|.+++|||||+|+|+|.+. ...++|||
T Consensus        47 ~~iG~G~~g~V~~~~~~g~~~------vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~-~~~~~iVt  119 (362)
T KOG0192|consen   47 EVLGSGSFGTVYKGKWRGTDV------VAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP-PGSLCIVT  119 (362)
T ss_pred             hhcccCCceeEEEEEeCCcee------EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-CCceEEEE
Confidence            669999999999999999863      7888887422   2266899999999999999999999999984 12699999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+++|+|.++|+... ...+++..++.|+.|||+||.|||++++  |||||||++||+
T Consensus       120 Ey~~~GsL~~~l~~~~-~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiL  175 (362)
T KOG0192|consen  120 EYMPGGSLSVLLHKKR-KRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNIL  175 (362)
T ss_pred             EeCCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEE
Confidence            9999999999999842 3469999999999999999999999743  999999999985

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.94  E-value=1.8e-26  Score=206.56  Aligned_cols=134  Identities=19%  Similarity=0.258  Sum_probs=118.6

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCchhhHhHHHHHHHHHhCCCCCcceee
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~  242 (316)
                      +++.|++..       +.||+|..|+||++.++.++..     +|+|.+.  .+....+++.+|+++++.++||+||.+|
T Consensus        76 i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i-----~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~y  143 (364)
T KOG0581|consen   76 ISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKI-----YALKVILLNIDPALQKQILRELEILRSCQSPYIVGFY  143 (364)
T ss_pred             cCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeE-----EEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEe
Confidence            666777766       8999999999999999988863     8889884  4666778999999999999999999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.|..++. .+.|+||||++|+|.+++...+   .+++...-.|+.+|++||.|||+.  .+||||||||+||+
T Consensus       144 gaF~~~~~-~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlL  211 (364)
T KOG0581|consen  144 GAFYSNGE-EISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLL  211 (364)
T ss_pred             EEEEeCCc-eEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHee
Confidence            99998622 6999999999999999998754   499999999999999999999975  57999999999985

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=1.8e-26  Score=208.52  Aligned_cols=130  Identities=13%  Similarity=0.204  Sum_probs=112.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--------hhhHhHHHHHHHHHhCCCCCcceeeeEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--------QGVKEFINDVNTLASLQHPNLCKLLGFH  245 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~g~~  245 (316)
                      .+.|...+.||+|+||.|-+|..+.++.     .||||++++..        .......+|+++|++|+|||||+++++|
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk-----~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f  245 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGK-----QVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF  245 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCc-----EEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee
Confidence            3456778999999999999999988876     38999887421        1122357999999999999999999999


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...  +..||||||++||+|++.+....   .+.+.....+++|++.||.|||+.   +|+||||||+||+
T Consensus       246 ~~~--ds~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNIL  308 (475)
T KOG0615|consen  246 EVP--DSSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENIL  308 (475)
T ss_pred             ecC--CceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEE
Confidence            984  88899999999999999998865   588888899999999999999995   7999999999995

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=3.7e-25  Score=208.61  Aligned_cols=129  Identities=19%  Similarity=0.288  Sum_probs=114.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..|..+++||+|+|+.||.+++.+++.+     +|+|.+.+    .....+...+||+|.+.|+|||||+|+++|++.  
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~-----~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs--   90 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEV-----VAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS--   90 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcE-----EEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC--
Confidence            4588889999999999999999666653     67776653    455667789999999999999999999999984  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|||+|+|.+|+|..+++.+.   .+++.++..++.||+.||.|||+.   +|||||||..||.
T Consensus        91 ~nVYivLELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlf  150 (592)
T KOG0575|consen   91 NNVYIVLELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLF  150 (592)
T ss_pred             CceEEEEEecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHHhc---Cceecccchhhee
Confidence            99999999999999999999654   699999999999999999999995   7999999999984

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.92  E-value=2.3e-25  Score=199.33  Aligned_cols=130  Identities=15%  Similarity=0.163  Sum_probs=115.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...++||+|+||+||.++..+++..     +|+|.+++.    ....+....|..||..++||+||.|+-.|.+  
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~ki-----YAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt--   96 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKI-----YAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQT--   96 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCce-----eehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEeccc--
Confidence            46788889999999999999999988763     899988742    3346678999999999999999999888877  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.+|||+||+.||+|+.+|...+   .|++..+..++.+|+.||.|||+   .+||||||||+||+
T Consensus        97 ~~kLylVld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENIL  157 (357)
T KOG0598|consen   97 EEKLYLVLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENIL  157 (357)
T ss_pred             CCeEEEEEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHee
Confidence            489999999999999999999765   59999999999999999999999   57999999999995

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=6e-25  Score=203.03  Aligned_cols=131  Identities=18%  Similarity=0.174  Sum_probs=111.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +.|...++||+|.||.||++++..++.+     ||+|++..+   .....-..+||.||++|+|||||+|.+...+....
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgki-----vALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~  191 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKI-----VALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG  191 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcE-----EEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence            3455558899999999999999888764     888888632   23344568999999999999999999998886557


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||+|||++ ||.-++....  -.|++.++..|+.|++.||+|||++   +|+|||||.+||+
T Consensus       192 siYlVFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiL  250 (560)
T KOG0600|consen  192 SIYLVFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNIL  250 (560)
T ss_pred             eEEEEEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceE
Confidence            89999999998 9998888753  3599999999999999999999995   6999999999995

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-24  Score=201.37  Aligned_cols=137  Identities=18%  Similarity=0.305  Sum_probs=119.5

Q ss_pred             CccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcce
Q 021173          161 TLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK  240 (316)
Q Consensus       161 ~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~  240 (316)
                      ..+.+..+++...       +.||+|.||.||+|.+.+...      |++|.++......+.|.+|+++|++|+|+|||+
T Consensus       199 d~wei~r~~l~l~-------~~LG~G~FG~V~~g~~~~~~~------vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~  265 (468)
T KOG0197|consen  199 DPWEIPREELKLI-------RELGSGQFGEVWLGKWNGSTK------VAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVK  265 (468)
T ss_pred             CCeeecHHHHHHH-------HHhcCCccceEEEEEEcCCCc------ccceEEeccccChhHHHHHHHHHHhCcccCeEE
Confidence            3445555666555       889999999999999998864      788888766666688999999999999999999


Q ss_pred             eeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+|+|..+  +.+|||||||+.|+|.++|+... +..+...+.+.++.|||+||+||+++   ++|||||...||+
T Consensus       266 l~gV~~~~--~piyIVtE~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiL  335 (468)
T KOG0197|consen  266 LYGVCTKQ--EPIYIVTEYMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNIL  335 (468)
T ss_pred             EEEEEecC--CceEEEEEecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---Cccchhhhhhhee
Confidence            99999985  57999999999999999999843 45699999999999999999999994   7999999999995

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=2.2e-25  Score=188.79  Aligned_cols=132  Identities=19%  Similarity=0.172  Sum_probs=115.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|..++.||+|.||.||.|+.+.+..+     +|+|.+.++.    +-..++.+|++|-+.|+||||+++|+||.++ 
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~I-----valKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~-   94 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFI-----VALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS-   94 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcE-----EEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc-
Confidence            35677889999999999999999887753     8888886432    3346789999999999999999999999995 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ...||++||..+|+|+..|+... ...|++.....++.|+|.||.|+|.   .+||||||||+|++
T Consensus        95 -~riyLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlL  156 (281)
T KOG0580|consen   95 -KRIYLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLL  156 (281)
T ss_pred             -ceeEEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhc
Confidence             89999999999999999999654 3358999999999999999999999   57999999999985

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=1.2e-24  Score=196.87  Aligned_cols=129  Identities=17%  Similarity=0.165  Sum_probs=114.3

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||.|..|+||++.+.++..     .+|+|.+.+    ......+...|-+||+.++||.|..||+.+..+  +.
T Consensus        79 f~llk~LG~GdiG~VyL~~l~~t~~-----~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~--~~  151 (459)
T KOG0610|consen   79 FRLLKRLGCGDIGTVYLVELRGTNC-----LFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD--KY  151 (459)
T ss_pred             HHHHHHcCCCCceeEEEEEecCCCc-----eEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc--ce
Confidence            4444899999999999999998874     388898874    344566788899999999999999999999985  89


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .|||||||+||+|..+++.+. +..|++..+..++.+|+.||+|||.   ++||+|||||+||+
T Consensus       152 ~cl~meyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENIL  211 (459)
T KOG0610|consen  152 SCLVMEYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENIL  211 (459)
T ss_pred             eEEEEecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeE
Confidence            999999999999999998876 5579999999999999999999999   67999999999995

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=202.43  Aligned_cols=133  Identities=20%  Similarity=0.192  Sum_probs=118.1

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEE
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFH  245 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~  245 (316)
                      ....++|..++.||+|+|++||+|+...++.     ++|||.+.+    .....+....|-++|.+| .||.|++|+-.|
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~k-----eYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF  143 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGK-----EYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF  143 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCc-----eeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence            4456789999999999999999999988775     499998874    334456678899999999 799999999999


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++  ..+|+|+||+++|+|.++|+..+   .|++.....++.+|+.||+|||++   +||||||||+||+
T Consensus       144 QD~--~sLYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENIL  206 (604)
T KOG0592|consen  144 QDE--ESLYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENIL  206 (604)
T ss_pred             ecc--cceEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhhee
Confidence            885  88999999999999999999875   599999999999999999999995   6999999999996

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.91  E-value=2.4e-24  Score=190.23  Aligned_cols=131  Identities=21%  Similarity=0.282  Sum_probs=112.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hh-HhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GV-KEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~-~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.|++|.||.||+|++..++++     ||+|+++.+..  +. -.-++||.+|.+++|+|||.+-.+.....-+
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eI-----VALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d  150 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEI-----VALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD  150 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCccee-----EEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence            3455558999999999999999988874     89999984332  21 2258999999999999999999888766568


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||++ ||..+|....  +.|...++..++.|++.||.|||.+   .|+|||||++|++
T Consensus       151 ~iy~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLL  209 (419)
T KOG0663|consen  151 KIYIVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLL  209 (419)
T ss_pred             eeeeeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhhee
Confidence            89999999998 9999998764  4699999999999999999999996   6999999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.91  E-value=1.6e-24  Score=189.19  Aligned_cols=128  Identities=16%  Similarity=0.174  Sum_probs=108.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .|....++|+|+||+||+|+.++++.+     ||||++..+.   .-.+--++|+.+|++|+|+|||.|+.+|..  ...
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqI-----VAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--krk   75 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQI-----VAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR--KRK   75 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccE-----EEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--cce
Confidence            355667899999999999999999874     8999886433   234557899999999999999999999988  488


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||+|||+. ++.+-|....+  .++...+..|++|++.|+.|+|++   +||||||||+||+
T Consensus        76 lhLVFE~~dh-TvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENIL  133 (396)
T KOG0593|consen   76 LHLVFEYCDH-TVLHELERYPN--GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENIL  133 (396)
T ss_pred             eEEEeeecch-HHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheE
Confidence            9999999998 45455555432  489999999999999999999996   6999999999995

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.6e-25  Score=192.39  Aligned_cols=134  Identities=15%  Similarity=0.176  Sum_probs=111.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |.+.++||.|.||.||++....++.     .+|.|.++-   +....+.+..|+.+|++|+|||||+++++...++...+
T Consensus        21 y~Il~~IG~GsFg~vykv~~~~~g~-----l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl   95 (375)
T KOG0591|consen   21 YQILKKIGRGSFGEVYKVQCLLDGK-----LVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL   95 (375)
T ss_pred             HHHHHHHcCCcchheEEeeeccCcc-----hhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence            4445899999999999999876654     278887762   45566779999999999999999999996555444568


Q ss_pred             EEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CcEEeccCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPF-QVIFYYFEMIKT  315 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~-~IiHrDlKp~NI  315 (316)
                      +||||||.+|||.++|+.- .....+++.++++++.|++.||..+|+.-+. -|+||||||.||
T Consensus        96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNI  159 (375)
T KOG0591|consen   96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANI  159 (375)
T ss_pred             HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchhe
Confidence            9999999999999999863 2356799999999999999999999994321 399999999998

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.90  E-value=6.2e-24  Score=200.35  Aligned_cols=135  Identities=19%  Similarity=0.299  Sum_probs=114.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      -++....++||+|+||.||+|.+...+..... .||+|..+.    ......+|++|+++|++++|+|||+|||++..+ 
T Consensus       156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~-~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~-  233 (474)
T KOG0194|consen  156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVV-PVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLE-  233 (474)
T ss_pred             ccCccccceeecccccEEEEEEEEecCCceee-eeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-
Confidence            34444459999999999999998765432111 178888773    356678899999999999999999999999985 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ..+|||||+|.||+|.++|+...+  .++..+++.+++++|.||+|||+   .++|||||-.+|++
T Consensus       234 -~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL  294 (474)
T KOG0194|consen  234 -EPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCL  294 (474)
T ss_pred             -CccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHhe
Confidence             889999999999999999998753  59999999999999999999999   47999999999974

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=7.4e-25  Score=201.14  Aligned_cols=130  Identities=17%  Similarity=0.220  Sum_probs=112.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHh--HHHHHHHHHhCC-CCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE--FINDVNTLASLQ-HPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||.|.||.||+|+-..++..     ||||+++......++  =++|+..|++|. |+|||+|...+.+.+ .
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~-----VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~-~   83 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGEL-----VAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND-R   83 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCce-----eeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC-c
Confidence            4566779999999999999998877763     999999854444444  368999999999 999999999998862 2


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|||||+. +|+++++++  +..|++..+..|+.||++||+|+|.+   ++.||||||+||+
T Consensus        84 ~L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiL  142 (538)
T KOG0661|consen   84 ILYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENIL  142 (538)
T ss_pred             eEeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheE
Confidence            89999999975 999999998  45799999999999999999999997   5899999999995

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.90  E-value=2e-23  Score=181.78  Aligned_cols=129  Identities=16%  Similarity=0.145  Sum_probs=113.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||.|+||+|.+++.+.++.     -+|+|.++..    ....+...+|..+|+.+.||++++|++.|.+.  
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~-----yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~--  116 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGN-----YYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDN--  116 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCc-----eeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccC--
Confidence            346666999999999999999987765     3899998743    23345688999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||++||.|+.+|+..+   .|++..+..+|.||+.||+|||+.   .||+|||||+||+
T Consensus       117 ~~lymvmeyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiL  176 (355)
T KOG0616|consen  117 SNLYMVMEYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLL  176 (355)
T ss_pred             CeEEEEEeccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHee
Confidence            89999999999999999999865   599999999999999999999994   7999999999985

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.90  E-value=3.5e-23  Score=192.72  Aligned_cols=131  Identities=16%  Similarity=0.098  Sum_probs=118.0

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ..++|....+||+|+||.||+|+.++++.+     +|+|+++++    ....+..+.|-.+|....+++||+||-.|.+ 
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~i-----yAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD-  212 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEI-----YAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQD-  212 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcE-----EeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecC-
Confidence            457899999999999999999999999874     899999853    3445668899999999999999999988887 


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       .+++||||||++|||+..+|....   .|++..+..++.+++.|++-||..   ++|||||||+|++
T Consensus       213 -~~~LYLiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlL  273 (550)
T KOG0605|consen  213 -KEYLYLIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLL  273 (550)
T ss_pred             -CCeeEEEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhhee
Confidence             599999999999999999999865   699999999999999999999995   6999999999985

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.89  E-value=1.8e-23  Score=179.61  Aligned_cols=128  Identities=15%  Similarity=0.267  Sum_probs=110.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh---hHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG---VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .|...+.||+|.||.||+|++..++..     ||||+++.....   ....++|+.+|+.++|+||+.|+++|...  +.
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~-----VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~--~~   75 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKR-----VAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK--SN   75 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcE-----EEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC--Cc
Confidence            466668999999999999999887763     888888743222   34578999999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.||+|||+. +|+..|+...  ..+....+..|+.++++||+|||.+   .|+||||||+|++
T Consensus        76 l~lVfEfm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLL  133 (318)
T KOG0659|consen   76 LSLVFEFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLL  133 (318)
T ss_pred             eEEEEEeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceE
Confidence            9999999987 9999999874  3689999999999999999999995   6999999999985

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.89  E-value=3.5e-23  Score=191.29  Aligned_cols=139  Identities=17%  Similarity=0.226  Sum_probs=110.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+...........|++|.+...  ......+.+|+.+|..+ +|+||++++++|... .
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~   84 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-N   84 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC-C
Confidence            3567788999999999999998632211111123888887632  23456799999999999 899999999998764 3


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC--------------------------------------------------------
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD--------------------------------------------------------  274 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------  274 (316)
                      +.+++||||+++|+|.++|.....                                                        
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            568999999999999999975321                                                        


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 ---GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 ---~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ...+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil  206 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNIL  206 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEE
Confidence               12478889999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=5.6e-23  Score=185.67  Aligned_cols=132  Identities=18%  Similarity=0.256  Sum_probs=110.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .+|...+.||+|+||.||++...+++.     ..|||.+... ....+.+.+|+.+|.+++|+|||+++|.........+
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~-----~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGE-----LMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEY   91 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCc-----ceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeee
Confidence            346667999999999999999987543     2777776532 1225678999999999999999999997554311268


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|+|||+++|+|.+++...+ + .|++..+..++.||++||.|||++   +||||||||+||+
T Consensus        92 ~i~mEy~~~GsL~~~~~~~g-~-~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiL  149 (313)
T KOG0198|consen   92 NIFMEYAPGGSLSDLIKRYG-G-KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANIL  149 (313)
T ss_pred             EeeeeccCCCcHHHHHHHcC-C-CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEE
Confidence            99999999999999999875 3 599999999999999999999985   6999999999985

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=6.9e-23  Score=192.45  Aligned_cols=129  Identities=13%  Similarity=0.065  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++....++.     .+++|.+..    .......+.+|++++..++|+||+++++++.+.  
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--   73 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGK-----IYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA--   73 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCC-----EEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC--
Confidence            468888999999999999999877665     378887653    223456788999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIl  133 (377)
T cd05629          74 QYLYLIMEFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNIL  133 (377)
T ss_pred             CeeEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEE
Confidence            88999999999999999997643   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=6.3e-23  Score=191.39  Aligned_cols=132  Identities=14%  Similarity=0.156  Sum_probs=113.0

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-----c-hhhHhHHHHHHHHHhCC-CCCcceeeeE
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----S-QGVKEFINDVNTLASLQ-HPNLCKLLGF  244 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~-~~~~~~~~E~~~l~~l~-HpnIv~l~g~  244 (316)
                      ...+.|..++.||+|+||+|+.|....++.     .+|+|.++..     . ...+.+.+|+.+++.+. ||||++++.+
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~-----~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev   88 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGE-----KVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEV   88 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCC-----eEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence            345678889999999999999999876654     3788865532     1 23445668999999999 9999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +...  ..+++|||||.||+|++++...+   .+.+..+..++.|++.|++|||++   +|+||||||+||+
T Consensus        89 ~~t~--~~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENil  152 (370)
T KOG0583|consen   89 FATP--TKIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENIL  152 (370)
T ss_pred             EecC--CeEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEE
Confidence            9985  77999999999999999999844   588999999999999999999995   6999999999985

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=3.7e-23  Score=189.96  Aligned_cols=134  Identities=18%  Similarity=0.170  Sum_probs=112.7

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---------------hhhHhHHHHHHHHHhCCCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------------QGVKEFINDVNTLASLQHP  236 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~Hp  236 (316)
                      ...+.|...+.||+|.||.|-++.....+..     +|+|.+.+..               ...+...+||.+|++|+|+
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l-----~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~  168 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKL-----YAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHP  168 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcE-----EEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCc
Confidence            4557899999999999999999998877653     8888886321               1134688999999999999


Q ss_pred             CcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       237 nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||+|+.+..+...+.+|||+|||..|.+...-..   ...+++.++..|+.++..||+|||.+   +||||||||+|++
T Consensus       169 nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d---~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLL  242 (576)
T KOG0585|consen  169 NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD---KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLL  242 (576)
T ss_pred             CeeEEEEeecCcccCceEEEEEeccCCccccCCCC---cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheE
Confidence            99999999988777899999999999988654332   22389999999999999999999995   6999999999985

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=7.3e-23  Score=191.15  Aligned_cols=129  Identities=16%  Similarity=0.108  Sum_probs=112.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ......+.+|+.+|..++|+||+++++++.+.  
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~--   73 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGH-----IYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE--   73 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--
Confidence            468888999999999999999987664     3788877532    23445688999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+.+|+|.+++....   .+++..+..|+.|++.||+|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl  133 (364)
T cd05599          74 NYLYLIMEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLL  133 (364)
T ss_pred             CeEEEEECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeE
Confidence            88999999999999999998653   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.89  E-value=1.1e-22  Score=190.10  Aligned_cols=129  Identities=13%  Similarity=0.055  Sum_probs=111.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++....++.     .+++|.+...    ......+.+|+.++..++|+||+++++++.+.  
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~--   73 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGH-----VYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK--   73 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCC-----EEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence            468888999999999999999887654     3788877532    23345688899999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||++|+|.+++....   .+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NIL  133 (363)
T cd05628          74 LNLYLIMEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLL  133 (363)
T ss_pred             CeEEEEEcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeE
Confidence            78999999999999999998653   589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.89  E-value=1.2e-22  Score=191.28  Aligned_cols=128  Identities=12%  Similarity=0.023  Sum_probs=111.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .|...+.||+|+||.||+|.+..++.     .+|+|.+..    .......+.+|+.++..++|+||+++++++.+.  +
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~--~   74 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHA-----LYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK--D   74 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC--C
Confidence            47778999999999999999987765     378887753    223456789999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+||||||+++|+|.+++....   .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nil  133 (381)
T cd05626          75 NLYFVMDYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNIL  133 (381)
T ss_pred             EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEE
Confidence            8999999999999999998653   589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.89  E-value=3.1e-23  Score=198.47  Aligned_cols=132  Identities=17%  Similarity=0.229  Sum_probs=114.4

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC----C
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----S  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~  250 (316)
                      |...+.||+|+||.||+|+.+.++.     .||||..+.  .....+.+.+|+++|++++|+|||++++.-.+..    .
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~-----~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~   89 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGR-----LVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVT   89 (732)
T ss_pred             eeehhhhcCCccceeeeeccccccc-----chhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccc
Confidence            4445889999999999999887776     389998874  3445677999999999999999999998866543    4


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....+|||||.+|||+..|..-.+...|++.+.+.++.+++.||.|||++   +||||||||.||.
T Consensus        90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIv  152 (732)
T KOG4250|consen   90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIV  152 (732)
T ss_pred             ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEE
Confidence            56789999999999999999876666799999999999999999999986   6999999999994

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.88  E-value=2.5e-22  Score=182.81  Aligned_cols=137  Identities=19%  Similarity=0.339  Sum_probs=111.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCce-----------eEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCccee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAST-----------SKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~-----------~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      ++|...+.||+|+||.||+|.+.++...           .....+++|.+..  .......|.+|+.+|.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            4577789999999999999987543310           0112478888764  23445679999999999999999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCC----------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRS----------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQV  305 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~----------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~I  305 (316)
                      ++++.++  +..+|||||+.+|+|.+++....                ....++|..++.++.||+.||.|||+.   +|
T Consensus        85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i  159 (304)
T cd05096          85 LGVCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF  159 (304)
T ss_pred             EEEEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence            9999875  77999999999999999986532                012478899999999999999999995   69


Q ss_pred             EEeccCCCCCC
Q 021173          306 IFYYFEMIKTE  316 (316)
Q Consensus       306 iHrDlKp~NI~  316 (316)
                      +||||||+||+
T Consensus       160 vH~dlkp~Nil  170 (304)
T cd05096         160 VHRDLATRNCL  170 (304)
T ss_pred             cccCcchhheE
Confidence            99999999984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.88  E-value=2.4e-22  Score=188.65  Aligned_cols=128  Identities=11%  Similarity=0.027  Sum_probs=111.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +|...+.||+|+||.||++....++.     .+|+|.+...    ......+.+|+.+|+.++|+||+++++++.++  +
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~--~   74 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNA-----LYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK--D   74 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCC-----EEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC--C
Confidence            67888999999999999999887664     3788877532    22345688999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||++|+|.++|....   .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        75 ~~~lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nil  133 (376)
T cd05598          75 NLYFVMDYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNIL  133 (376)
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEE
Confidence            9999999999999999997753   588999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.88  E-value=2.2e-22  Score=189.30  Aligned_cols=128  Identities=11%  Similarity=0.025  Sum_probs=110.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .|...+.||+|+||.||+|....++.     .+++|.+...    ......+.+|+.+++.++|+||+++++++.+.  +
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~--~   74 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKA-----LYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK--D   74 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCC-----EEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC--C
Confidence            47778999999999999999877665     3788877632    23456788999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||++|+|.+++....   .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NIL  133 (382)
T cd05625          75 NLYFVMDYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNIL  133 (382)
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            8999999999999999997653   488999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.3e-22  Score=183.78  Aligned_cols=129  Identities=11%  Similarity=0.084  Sum_probs=111.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ....+.+.+|+.+++.++|+||+++++++.+.  
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--   73 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEH-----YYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ--   73 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCC-----EEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC--
Confidence            367888999999999999999986654     3788877532    23345688999999999999999999988774  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+++||||+.+|+|.+++....   .+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIl  133 (291)
T cd05612          74 RFLYMLMEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENIL  133 (291)
T ss_pred             CeEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeE
Confidence            78999999999999999998654   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.88  E-value=5.5e-23  Score=192.20  Aligned_cols=128  Identities=16%  Similarity=0.222  Sum_probs=113.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|.||.||+|+.+.+...     ||+|.+.+   .....+.+.+|++|++.++|||||.++.+|+..  .
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~-----vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~--~   74 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQV-----VAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETS--A   74 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeE-----EEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhccc--c
Confidence            4677778999999999999998887653     88888864   344566799999999999999999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|+|+|||.| +|+.+|....   .++++.+..|++++..||.|||++   +|+|||+||.||+
T Consensus        75 ~~~vVte~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniL  132 (808)
T KOG0597|consen   75 HLWVVTEYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNIL  132 (808)
T ss_pred             eEEEEehhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceee
Confidence            99999999987 9999999865   499999999999999999999995   7999999999995

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.88  E-value=2e-22  Score=189.36  Aligned_cols=137  Identities=18%  Similarity=0.237  Sum_probs=109.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+...........+++|.+...  ....+.+.+|+.+|..+ +||||++++++|...  +
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~--~  112 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG--G  112 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--C
Confidence            357777999999999999998532111111124888888632  33456789999999999 899999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC---------------------------------------------------------
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD---------------------------------------------------------  274 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------  274 (316)
                      ..++|||||++|+|.+++.....                                                         
T Consensus       113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (375)
T cd05104         113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG  192 (375)
T ss_pred             cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence            89999999999999999975321                                                         


Q ss_pred             ---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 ---------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 ---------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                                     ...++|..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  246 (375)
T cd05104         193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNIL  246 (375)
T ss_pred             eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEE
Confidence                           12478999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.88  E-value=2.8e-22  Score=185.02  Aligned_cols=129  Identities=12%  Similarity=0.144  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ....+.+.+|+.+|+.++|+||+++++++.++  
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--   90 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGE-----YYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE--   90 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCC-----EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC--
Confidence            567778999999999999999987664     3777776532    23346689999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        91 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIl  150 (329)
T PTZ00263         91 NRVYFLLEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLL  150 (329)
T ss_pred             CEEEEEEcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEE
Confidence            88999999999999999998754   489999999999999999999995   6999999999984

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.88  E-value=2.4e-22  Score=188.52  Aligned_cols=131  Identities=11%  Similarity=0.062  Sum_probs=111.9

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ...++|...+.||+|+||.||++.+..++..     +|+|.+..    .......+.+|+.+++.++|+||+++++++.+
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~-----~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKV-----YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQD  114 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCE-----EEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence            3456888899999999999999999876652     77777642    22334568899999999999999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +  +.+|||||||++|+|.+++...    .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus       115 ~--~~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NIL  174 (370)
T cd05621         115 D--KYLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNML  174 (370)
T ss_pred             C--CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEE
Confidence            4  8899999999999999999754    388999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.88  E-value=4.8e-22  Score=177.58  Aligned_cols=133  Identities=17%  Similarity=0.276  Sum_probs=111.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+.....  ....+++|.+...  ......|.+|+.++.+++|+||+++++++...  +.
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~--~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~   80 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSK--RELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG--NT   80 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCC--ceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC--CC
Confidence            457778999999999999998753221  1134888887743  23346799999999999999999999998874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+.+|+|.+++....  ..+++..++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nil  139 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVL  139 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEE
Confidence            999999999999999998643  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.88  E-value=5e-22  Score=182.02  Aligned_cols=133  Identities=18%  Similarity=0.326  Sum_probs=111.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .+|...+.||+|+||.||+|.+..++... ...+++|.+..  .....++|.+|+.+++.++|+||++++|+|..   +.
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---~~   82 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---ST   82 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCcc-ceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC---CC
Confidence            45888899999999999999986554422 22378888763  23445679999999999999999999999986   56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|+||+.+|+|.+++....  ..+++..++.++.||+.||+|||+.   +|+||||||+||+
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nil  141 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVL  141 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheE
Confidence            789999999999999998753  2589999999999999999999994   7999999999985

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.88  E-value=5.5e-23  Score=185.70  Aligned_cols=128  Identities=13%  Similarity=0.211  Sum_probs=113.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .|.+.+.||+|.||+|-++.....+.     .||||.+.+    +.++.-.+.+|++||+.|+||||+.+|.+|..  .+
T Consensus        54 RyE~~etLGkGTYGKVk~A~e~~sgR-----~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFEN--kd  126 (668)
T KOG0611|consen   54 RYEITETLGKGTYGKVKLAYEHKSGR-----EVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN--KD  126 (668)
T ss_pred             HHHHHHHhcCCcccceeehhhccCCc-----EeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcC--Cc
Confidence            45555889999999999999865554     389998874    45566678999999999999999999999987  58


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.|||||..+|.|++|+.+++   .|++.++..|++||..|+.|+|.+   +|+|||||.+||+
T Consensus       127 KIvivMEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENIL  185 (668)
T KOG0611|consen  127 KIVIVMEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENIL  185 (668)
T ss_pred             eEEEEEEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhhee
Confidence            9999999999999999999876   599999999999999999999996   6999999999995

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.88  E-value=6.9e-23  Score=180.18  Aligned_cols=133  Identities=17%  Similarity=0.241  Sum_probs=117.7

Q ss_pred             CHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCC-CCCcceeee
Q 021173          166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQ-HPNLCKLLG  243 (316)
Q Consensus       166 ~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~-HpnIv~l~g  243 (316)
                      +++|+-..|+     +.||+|+|+.|-.|....++.     ++|||++.+ ......+..+|++++.+++ |+||++|+.
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~-----EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLie  143 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGK-----EYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIE  143 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccch-----hhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHH
Confidence            4677777776     789999999999998766553     499999985 4455678899999999997 999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||.++  +.+|||||.|.||.|..+|+.+.   .|++.++..+..+|+.||+|||.+   +|.||||||+||+
T Consensus       144 fFEdd--~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiL  208 (463)
T KOG0607|consen  144 FFEDD--TRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENIL  208 (463)
T ss_pred             Hhccc--ceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCcccee
Confidence            99986  88999999999999999999865   599999999999999999999994   6999999999995

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.88  E-value=4.6e-22  Score=179.60  Aligned_cols=129  Identities=16%  Similarity=0.162  Sum_probs=108.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+...    ......+.+|+.++..++|+||+.+++++.++  +.
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~--~~   74 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK--DA   74 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCc-----eEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC--Ce
Confidence            6667899999999999999876654     3788876532    22334688999999999999999999998874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        75 ~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil  134 (285)
T cd05631          75 LCLVLTIMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENIL  134 (285)
T ss_pred             EEEEEEecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEE
Confidence            999999999999998886543 23589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.88  E-value=8.3e-22  Score=183.50  Aligned_cols=123  Identities=14%  Similarity=0.195  Sum_probs=102.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||+|.+..++.     .|++|.+..  .......|.+|+++++.++|+||+++++++..+  +.++
T Consensus        76 ~~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~  148 (353)
T PLN00034         76 LERVNRIGSGAGGTVYKVIHRPTGR-----LYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN--GEIQ  148 (353)
T ss_pred             HhhhhhccCCCCeEEEEEEECCCCC-----EEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC--CeEE
Confidence            3344889999999999999876554     378887753  233456789999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+..       .+.+..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       149 lv~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl  200 (353)
T PLN00034        149 VLLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLL  200 (353)
T ss_pred             EEEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEE
Confidence            999999999986432       356778889999999999999995   6999999999984

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=3.4e-22  Score=179.57  Aligned_cols=128  Identities=15%  Similarity=0.281  Sum_probs=105.4

Q ss_pred             eeeecCceEEEEEEECCCC-------------------ceeEEEEEeeeecCCCc-hhhHhHHHHHHHHHhCCCCCccee
Q 021173          182 CISEGLSSVMYRASFGDDA-------------------STSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~-------------------~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      .||+|+||.||+|.+..++                   .......+++|.+.... .....|.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5899999999999864221                   11233458888886432 334568899999999999999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|.+.  +..+|||||+++|+|..++....  ..+++..++.++.||+.||+|||+.   +|+||||||+||+
T Consensus        82 ~~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nil  149 (274)
T cd05076          82 HGVCVRG--SENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNIL  149 (274)
T ss_pred             EEEEEeC--CceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEE
Confidence            9999884  78899999999999999987642  2589999999999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.88  E-value=3.9e-22  Score=188.83  Aligned_cols=138  Identities=16%  Similarity=0.237  Sum_probs=111.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~  250 (316)
                      .++|...++||+|+||.||+|++...........|++|.+...  ....+.|.+|+.+|+++. ||||++++++|.+.  
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~--  113 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS--  113 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC--
Confidence            4567788999999999999999754332112234888988632  233467999999999996 99999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC--------------------------------------------------------
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD--------------------------------------------------------  274 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------  274 (316)
                      +..|||||||++|+|.++|.....                                                        
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            789999999999999999875310                                                        


Q ss_pred             -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 -------------------------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 -------------------------------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                                                           ...+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nil  269 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVL  269 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEE
Confidence                                                 12478889999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.88  E-value=5.7e-22  Score=182.38  Aligned_cols=123  Identities=13%  Similarity=0.104  Sum_probs=106.2

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      ++||+|+||.||++....++.     .+++|.+..    .......+.+|+.+|+.++|+||+++++++...  +..|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~lv   73 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGK-----YYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH--DRLCFV   73 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC--CEEEEE
Confidence            469999999999999876664     377787753    233456688999999999999999999998874  889999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||+.+|+|.+++....   .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        74 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIl  127 (323)
T cd05571          74 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLM  127 (323)
T ss_pred             EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEE
Confidence            99999999999997653   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=5.4e-22  Score=183.18  Aligned_cols=129  Identities=16%  Similarity=0.123  Sum_probs=111.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ......+.+|+.++..++|+||+++++++...  
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--   73 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGE-----IVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDD--   73 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCC-----EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcC--
Confidence            367888999999999999999987654     3788877532    23456788999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..||||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  133 (333)
T cd05600          74 EYLYLAMEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFL  133 (333)
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            88999999999999999997653   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.87  E-value=1.7e-22  Score=197.75  Aligned_cols=135  Identities=15%  Similarity=0.209  Sum_probs=114.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC-CCchhhHhHHHHHHHHHhCC-CCCcceeeeE-EEc---C
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQ-HPNLCKLLGF-HAR---D  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~-~~~---~  248 (316)
                      ....+.+.|.+|+|+.||.+.+..++.     ++|+|++- .++...+.+.+||++|++|. |+|||.+++. ...   +
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~-----~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGK-----KYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN  111 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCc-----eeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence            345566999999999999999988742     38888775 47788889999999999998 9999999993 322   2


Q ss_pred             C-CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 G-SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~-~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      + .-.++|.||||.||.|-++|..+... .|++.++++|+.++|+|+.+||...+ +|||||||.|||+
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~p-PiIHRDLKiENvL  178 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKP-PIIHRDLKIENVL  178 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCC-ccchhhhhhhheE
Confidence            1 24678999999999999999976533 39999999999999999999999874 8999999999985

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5.8e-22  Score=181.00  Aligned_cols=132  Identities=17%  Similarity=0.215  Sum_probs=116.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ..+|...+.||.|..++||+|+....++.     ||||+++.  .......+.+|+..|+.++||||+.++..|..+  .
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~-----VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~--~   97 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEV-----VAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD--S   97 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCE-----EEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec--c
Confidence            35688889999999999999999877763     99999873  344578899999999999999999999998884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|+||.||.+|++.++++... ...|++..+..|.+++++||.|||.+|   -||||||+.||+
T Consensus        98 ~LWvVmpfMa~GS~ldIik~~~-~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnIL  158 (516)
T KOG0582|consen   98 ELWVVMPFMAGGSLLDIIKTYY-PDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNIL  158 (516)
T ss_pred             eeEEeehhhcCCcHHHHHHHHc-cccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEE
Confidence            9999999999999999999865 335999999999999999999999975   699999999995

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.87  E-value=7.2e-22  Score=181.78  Aligned_cols=123  Identities=13%  Similarity=0.108  Sum_probs=105.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      +.||+|+||.||++....++.     .+++|.+..    .......+.+|+.+++.++|+||+++++++..+  +.+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~--~~~~lv   73 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGR-----YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--DRLCFV   73 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC--CEEEEE
Confidence            469999999999999876654     377787753    233456688999999999999999999998874  789999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||+++|+|..++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        74 ~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  127 (323)
T cd05595          74 MEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLM  127 (323)
T ss_pred             EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEE
Confidence            99999999999887653   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.87  E-value=7.7e-22  Score=184.20  Aligned_cols=129  Identities=13%  Similarity=0.070  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++....++.     .+++|.+..    .......+.+|+.++..++|+||+++++++.+.  
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~--   73 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGH-----IYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDK--   73 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--
Confidence            467888999999999999999987665     377887752    233456688899999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIl  133 (360)
T cd05627          74 RNLYLIMEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLL  133 (360)
T ss_pred             CEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEE
Confidence            88999999999999999997653   489999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.87  E-value=6.3e-22  Score=183.60  Aligned_cols=130  Identities=12%  Similarity=0.165  Sum_probs=110.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..+..    ..+++|.+..    .....+.+.+|+.++..++||||+++++++.++  
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--  103 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDF----PPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE--  103 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCC----eEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC--
Confidence            457778999999999999998765432    1267776642    223456688999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.++|||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIL  163 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLL  163 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEE
Confidence            78999999999999999998754   489999999999999999999995   6999999999984

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.87  E-value=7.6e-22  Score=174.95  Aligned_cols=128  Identities=14%  Similarity=0.264  Sum_probs=110.6

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +|...+.||+|+||.||++.+.++..      +++|.+.........|.+|+.+|+.++|+||+++++++...  +..++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~------~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~i   76 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIK------VAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ--KPLYI   76 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCce------EEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccC--CCEEE
Confidence            46667899999999999999876543      78887765444556799999999999999999999998874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        77 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~  132 (256)
T cd05114          77 VTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCL  132 (256)
T ss_pred             EEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEE
Confidence            999999999999997643  2489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.87  E-value=1.6e-22  Score=197.36  Aligned_cols=136  Identities=22%  Similarity=0.330  Sum_probs=115.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +....+.||+|+||+||+|...+......++.||||.++.  +.+..++|.+|+++|..++|+|||+|+|.|..  ++.+
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--~~P~  564 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE--GDPL  564 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc--CCee
Confidence            3444588999999999999987665444456699999984  33467889999999999999999999999998  4889


Q ss_pred             EEEEecCCCCCHHHHHhcCCC-------CCC----CCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSD-------GPP----IDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~-------~~~----l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||+|||..|||.++|+....       +..    ++..+.+.||.|||.||+||-++   .+|||||-..|.+
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCL  635 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCL  635 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhce
Confidence            999999999999999995431       223    88899999999999999999995   7999999999964

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.87  E-value=1.1e-21  Score=181.10  Aligned_cols=123  Identities=12%  Similarity=0.125  Sum_probs=106.2

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      +.||+|+||.||++....++.     .+++|.+..    .......+.+|+.+++.++|+||+++++++..+  +..+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~~lv   73 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGK-----YYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK--DRLCFV   73 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC--CEEEEE
Confidence            469999999999999876654     377787753    234456788999999999999999999998874  889999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||+++|+|.+++....   .+++..+..++.||+.||+|||++   +|+||||||+||+
T Consensus        74 ~Ey~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIl  127 (328)
T cd05593          74 MEYVNGGELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLM  127 (328)
T ss_pred             EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeE
Confidence            99999999999987643   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=8.8e-22  Score=181.82  Aligned_cols=130  Identities=10%  Similarity=0.030  Sum_probs=111.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++....++.     .+|+|.+..    .....+.|.+|+.++..++|+||+.+++++.++  
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--   73 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQ-----VYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE--   73 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCC-----EEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC--
Confidence            468888999999999999999887654     378887753    223345688999999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....  ..+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  134 (331)
T cd05597          74 NNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVL  134 (331)
T ss_pred             CeEEEEEecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEE
Confidence            88999999999999999997632  2589999999999999999999995   7999999999984

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.87  E-value=4.6e-22  Score=186.60  Aligned_cols=130  Identities=12%  Similarity=0.032  Sum_probs=111.0

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ..++|...+.||+|+||.||++....++.     .+++|.+..    .......+.+|+.+++.++|+||+++++++.++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~  115 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQ-----VYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD  115 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            34678888999999999999999987665     378887753    223345578999999999999999999988874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.+||||||+++|+|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus       116 --~~~~lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIL  174 (370)
T cd05596         116 --KYLYMVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNML  174 (370)
T ss_pred             --CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence              8899999999999999998754    388889999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.87  E-value=2e-21  Score=178.87  Aligned_cols=124  Identities=14%  Similarity=0.109  Sum_probs=105.5

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      +.||+|+||.||++....++.     .+++|.+..    .......+.+|+.++..++|+||+.+++++..+  +.+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~--~~~~lv   73 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH--DRLCFV   73 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC--CEEEEE
Confidence            469999999999999876654     377777653    233456678999999999999999999988874  889999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||+.+|+|..++....   .+++..+..++.||+.||.|||+.  .+|+||||||+||+
T Consensus        74 ~E~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIl  128 (325)
T cd05594          74 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLM  128 (325)
T ss_pred             EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEE
Confidence            99999999999887643   589999999999999999999973  36999999999984

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.87  E-value=1.3e-21  Score=180.79  Aligned_cols=130  Identities=11%  Similarity=0.023  Sum_probs=110.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..    .......+..|+.++..++|+||+.+++++.++  
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~--   73 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTER-----IYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE--   73 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--
Confidence            468888999999999999999887665     277787753    222345588899999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..||||||+.+|+|.+++....  ..+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nil  134 (331)
T cd05624          74 NYLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVL  134 (331)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEE
Confidence            88999999999999999998642  2589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=9.4e-22  Score=180.02  Aligned_cols=121  Identities=15%  Similarity=0.099  Sum_probs=105.0

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||+|+||.||+|.+..++.     .+++|.+..    .......+.+|+.+|.+++|+||+++++++...  +..+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e   73 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQR-----IYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP--EKLYLVLA   73 (312)
T ss_pred             CCcCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC--CeEEEEEc
Confidence            6999999999999987664     277777652    234456788999999999999999999998874  88999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nil  125 (312)
T cd05585          74 FINGGELFHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENIL  125 (312)
T ss_pred             CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeE
Confidence            999999999998653   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.87  E-value=5.9e-22  Score=177.01  Aligned_cols=131  Identities=15%  Similarity=0.187  Sum_probs=107.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch---hhHhHHHHHHHHHhCCCCC-cceeeeEEEcCC---
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ---GVKEFINDVNTLASLQHPN-LCKLLGFHARDG---  249 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~---  249 (316)
                      |...+.||+|+||+||+|+...++.     .||+|.+.....   .-....+|+.+|+.|+|+| ||.|++++..+.   
T Consensus        13 ~~~~eklGeGtyg~Vykar~~~~g~-----~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSKRTGK-----FVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEecCCC-----EEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccc
Confidence            4444779999999999999987775     388888864322   2244689999999999999 999999998852   


Q ss_pred             -CCeEEEEEecCCCCCHHHHHhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -SDQRMLIYERLFHGSLDRLIYGRSDG-PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -~~~~~lV~Ey~~~GsL~~~L~~~~~~-~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ...++||+||+.. +|..++...... ..++...+..+++||+.||+|||++   +|+||||||+||+
T Consensus        88 ~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlL  152 (323)
T KOG0594|consen   88 GIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLL  152 (323)
T ss_pred             ccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEE
Confidence             1278999999976 999999886421 3577789999999999999999996   6999999999984

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.87  E-value=1.9e-21  Score=179.45  Aligned_cols=130  Identities=15%  Similarity=0.199  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..  .......|.+|+++|++++|+||+++++++..+  +.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~   77 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGL-----IMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GE   77 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCc-----EEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--CE
Confidence            578888999999999999999987664     267776653  233456799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++....   .+++..+..++.|++.||.|||+.+  +|+||||||+||+
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil  136 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNIL  136 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEE
Confidence            999999999999999998653   4899999999999999999999853  5999999999984

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.87  E-value=1.8e-21  Score=179.90  Aligned_cols=131  Identities=16%  Similarity=0.220  Sum_probs=112.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||++.+..++..     +++|.+..  .......+.+|+++++.++|+||++++++|.++  +
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~-----~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   76 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLI-----MARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--G   76 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcE-----EEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC--C
Confidence            36788889999999999999999876652     66666653  233456799999999999999999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.+  +|+||||||+||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nil  136 (333)
T cd06650          77 EISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNIL  136 (333)
T ss_pred             EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEE
Confidence            8999999999999999997643   4889999999999999999999842  5999999999984

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.87  E-value=7.5e-23  Score=182.97  Aligned_cols=128  Identities=18%  Similarity=0.251  Sum_probs=103.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC---eE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD---QR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~---~~  253 (316)
                      |...+++|.|+||.||+|.+..+..     .+|||+.-.+.   +.--+|+++|+.++|||||+|.-+|......   .+
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~-----~vAIKKv~~d~---r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEE-----EVAIKKVLQDK---RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCc-----eeEEEEecCCC---CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence            5556999999999999999987754     48888765332   2234799999999999999998887764333   45


Q ss_pred             EEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .||||||+. +|.+.++... .+..++...+..+++||++||.|||+   .+|+||||||.||+
T Consensus        98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlL  157 (364)
T KOG0658|consen   98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLL  157 (364)
T ss_pred             HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEE
Confidence            689999987 9999998521 13458888889999999999999999   47999999999985

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.87  E-value=1.4e-22  Score=191.69  Aligned_cols=132  Identities=17%  Similarity=0.269  Sum_probs=115.8

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      ..+||+|+|-+||+|.+..++..+.+-.+.+..+.......++|..|+.+|+.|+|+|||++|.+|.+.....+.+|+|.
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            37899999999999999888876555444444444567778899999999999999999999999998766678899999


Q ss_pred             CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      +..|+|..|+.+.+   .++...+..|++||++||.|||++.| +|||||||.+||
T Consensus       125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNI  176 (632)
T KOG0584|consen  125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNI  176 (632)
T ss_pred             ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceE
Confidence            99999999999865   48889999999999999999999986 999999999998

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.87  E-value=1.2e-21  Score=180.49  Aligned_cols=130  Identities=12%  Similarity=0.038  Sum_probs=111.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++....++.     .+++|.+...    ....+.+..|+.+++.++|+||+.+++++.+.  
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~--   73 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGD-----IYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDK--   73 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecC--
Confidence            468888999999999999999887665     3788877632    23456688999999999999999999988874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+++|+|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIl  134 (330)
T cd05601          74 DNLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVL  134 (330)
T ss_pred             CeEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheE
Confidence            78999999999999999998752  2599999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.87  E-value=6.4e-22  Score=185.88  Aligned_cols=137  Identities=19%  Similarity=0.273  Sum_probs=110.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+...+.......|++|.+...  ......+.+|+.+++.+ +|+|||+++++|...  +
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~--~  115 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHG--G  115 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--C
Confidence            457777999999999999998644322111123888988642  23356688999999999 799999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC---------------------------------------------------------
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD---------------------------------------------------------  274 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------  274 (316)
                      .++||||||.+|+|.+++.....                                                         
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            89999999999999999864210                                                         


Q ss_pred             ----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 ----------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 ----------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                                ...+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil  244 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVL  244 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEE
Confidence                      12478899999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.87  E-value=1e-21  Score=184.35  Aligned_cols=136  Identities=11%  Similarity=0.063  Sum_probs=114.9

Q ss_pred             HHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceee
Q 021173          167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       167 ~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~  242 (316)
                      +.++....++|...+.||+|+||.||++.+..++..     +++|.+..    .......+.+|+.+++.++|+||++++
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~-----~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~  109 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKV-----YAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF  109 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcE-----EEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            334455568899999999999999999999877653     77777642    223345588999999999999999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++.+.  +.+++||||+++|+|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus       110 ~~~~~~--~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIl  174 (371)
T cd05622         110 YAFQDD--RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNML  174 (371)
T ss_pred             EEEEcC--CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEE
Confidence            998874  8899999999999999999754    388899999999999999999995   7999999999984

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.87  E-value=1.6e-21  Score=182.99  Aligned_cols=128  Identities=21%  Similarity=0.358  Sum_probs=110.4

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ..+++.||+|.||.|.+|...+..      .||||.++.  ......+|..|+.+|.+|+|||||.|+|.|..+  +.++
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg~l------kVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D--ePic  611 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEGPL------KVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD--DPLC  611 (807)
T ss_pred             eehhhhhcCcccceeEEEEecCce------EEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC--CchH
Confidence            344589999999999999988743      499999985  344567899999999999999999999999986  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|+|||++|+|.++|..... ..+.....+.|+.||+.||+||.+   .++|||||.+.|++
T Consensus       612 mI~EYmEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcL  669 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCL  669 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHh---hchhhcccccccee
Confidence            99999999999999998742 224556677899999999999999   58999999999975

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.87  E-value=1.6e-21  Score=176.36  Aligned_cols=129  Identities=12%  Similarity=0.185  Sum_probs=108.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|....++.     .+++|.+...  ......+.+|+.+++.++|+||+++++++.++  +.
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~   77 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTEN-----LVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE--RC   77 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCC-----EEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC--Ce
Confidence            468888999999999999999887664     3777776532  22345678999999999999999999998874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+ +|.+++....  ..+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        78 ~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil  135 (288)
T cd07871          78 LTLVFEYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLL  135 (288)
T ss_pred             EEEEEeCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence            9999999975 9999887643  2588999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=7.7e-22  Score=183.02  Aligned_cols=129  Identities=16%  Similarity=0.106  Sum_probs=111.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ......+..|+.++..++|+||+++++++.++  
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--   73 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQ-----VYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDE--   73 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCC-----EEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecC--
Confidence            468888999999999999999986554     3788877532    23456788999999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIl  133 (350)
T cd05573          74 EHLYLVMEYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNIL  133 (350)
T ss_pred             CeEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeE
Confidence            88999999999999999998753   589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.86  E-value=1.5e-21  Score=174.67  Aligned_cols=137  Identities=17%  Similarity=0.245  Sum_probs=112.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .+|.....||+|+||.||+|.............+++|.+.....  ....|.+|+.++++++|+||+++++++.+.  +.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~   82 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA--EP   82 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC--Cc
Confidence            45777799999999999999986543322223478887764332  356799999999999999999999998774  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCC------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDG------PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~------~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++......      ..+++..++.++.|++.||.|||++   +|+||||||+||.
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nil  149 (275)
T cd05046          83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCL  149 (275)
T ss_pred             ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEE
Confidence            89999999999999999865421      1589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.86  E-value=1.8e-21  Score=172.87  Aligned_cols=130  Identities=16%  Similarity=0.314  Sum_probs=112.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.++..      +++|.+.......+.|.+|+.+++.++|+||+++++++...  +..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~------v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~   77 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYNNSTK------VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE--EPIY   77 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEecCCce------EEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--CCcE
Confidence            457777999999999999999876543      78887775555567899999999999999999999988764  7889


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        78 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil  135 (261)
T cd05072          78 IITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVL  135 (261)
T ss_pred             EEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEE
Confidence            9999999999999997643 33589999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.86  E-value=1.5e-21  Score=182.44  Aligned_cols=130  Identities=17%  Similarity=0.181  Sum_probs=113.8

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCC-CCCcceeeeEEEc
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQ-HPNLCKLLGFHAR  247 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~  247 (316)
                      ....|...+.||.|.||.||+|....++.     .+|+|.+.+.    ......+.+|+.+|+++. |||||.++++|.+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~-----~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~  107 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGK-----EVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED  107 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCc-----eeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc
Confidence            34567777999999999999999988665     3777777642    224567999999999998 9999999999998


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +.++||||+|.||.|++.|...    .+++..+..++.|++.++.|||+   .+|+||||||+|++
T Consensus       108 ~--~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L  167 (382)
T KOG0032|consen  108 P--DSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLL  167 (382)
T ss_pred             C--CeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHee
Confidence            5  8999999999999999999887    29999999999999999999999   47999999999985

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=2.1e-21  Score=175.29  Aligned_cols=130  Identities=18%  Similarity=0.179  Sum_probs=109.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+...    ......+.+|+.+++.++|+||+.+++++.+.  +
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   73 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK--D   73 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCc-----eEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC--C
Confidence            36677999999999999999876554     3788877532    22335578899999999999999999998874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  134 (285)
T cd05605          74 ALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENIL  134 (285)
T ss_pred             eEEEEEeccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEE
Confidence            8999999999999998887543 23589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00284 protein kinase; Provisional

Probab=99.86  E-value=1.3e-20  Score=182.00  Aligned_cols=138  Identities=10%  Similarity=0.145  Sum_probs=110.7

Q ss_pred             HHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC------CCcce
Q 021173          167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH------PNLCK  240 (316)
Q Consensus       167 ~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H------pnIv~  240 (316)
                      .+++...+++|...++||+|+||+||+|.+..++.     .||||.+.........+..|+.++..++|      .+|+.
T Consensus       121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~-----~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~  195 (467)
T PTZ00284        121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKE-----YCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMK  195 (467)
T ss_pred             CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCe-----EEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceee
Confidence            34555567889999999999999999999877654     38888886443444556678887777754      45888


Q ss_pred             eeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++..+ .+.+|||||++ +++|.+++....   .+++..+..|+.||+.||+|||++  .+||||||||+||+
T Consensus       196 i~~~~~~~-~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NIL  264 (467)
T PTZ00284        196 IQRYFQNE-TGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENIL  264 (467)
T ss_pred             eEEEEEcC-CceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEE
Confidence            98888764 46789999988 778999887653   599999999999999999999974  36999999999985

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.86  E-value=2.2e-21  Score=179.11  Aligned_cols=130  Identities=10%  Similarity=0.033  Sum_probs=110.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..    .......|..|+.++..++|+||+.+++++.++  
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--   73 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADK-----VFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE--   73 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCC-----EEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--
Confidence            468888999999999999999987765     377777652    222334588899999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+.+|+|.+++....  ..+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nil  134 (332)
T cd05623          74 NNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNIL  134 (332)
T ss_pred             CEEEEEEeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEE
Confidence            88999999999999999998642  2589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.86  E-value=2.4e-21  Score=172.49  Aligned_cols=130  Identities=17%  Similarity=0.272  Sum_probs=112.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +|...+.||+|+||.||+|.+.+.+.     .+++|.+.........+.+|+.+++.++|+||+++++++..+  +.+++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l   79 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPFYI   79 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCc-----eEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCC--CCcEE
Confidence            46667899999999999999876554     378888776555667899999999999999999999999874  78899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        80 v~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil  136 (263)
T cd05052          80 ITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCL  136 (263)
T ss_pred             EEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEE
Confidence            999999999999997643 33589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.86  E-value=3.3e-21  Score=175.47  Aligned_cols=130  Identities=12%  Similarity=0.161  Sum_probs=108.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|....++.     .+++|.+...  ......+.+|+.+++.++|+||+++++++.++  +
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~   76 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGK-----LVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTK--E   76 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCC-----EEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecC--C
Confidence            3678888999999999999999976554     3788877632  22234578999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+. ++|.+++....  ..+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nil  135 (303)
T cd07869          77 TLTLVFEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLL  135 (303)
T ss_pred             eEEEEEECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            8999999995 68888887643  2488999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.86  E-value=2.3e-21  Score=183.65  Aligned_cols=136  Identities=17%  Similarity=0.264  Sum_probs=109.8

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||+|++.+.........|++|.+...  ....+.+.+|+.+|..+. |+||++++++|..+  +.
T Consensus        38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~--~~  115 (401)
T cd05107          38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG--GP  115 (401)
T ss_pred             HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC--CC
Confidence            45566999999999999999865322112234899988743  233457899999999997 99999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCC----------------------------------------------------------
Q 021173          253 RMLIYERLFHGSLDRLIYGRSD----------------------------------------------------------  274 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~----------------------------------------------------------  274 (316)
                      .+||||||.+|+|.++|+....                                                          
T Consensus       116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM  195 (401)
T ss_pred             cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence            9999999999999999975321                                                          


Q ss_pred             -------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 -------------------------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 -------------------------------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                                                           ...+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiL  271 (401)
T cd05107         196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVL  271 (401)
T ss_pred             hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEE
Confidence                                                 12467888999999999999999984   7999999999984

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.86  E-value=2.4e-21  Score=172.04  Aligned_cols=128  Identities=14%  Similarity=0.238  Sum_probs=110.6

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +|...+.||+|+||.||++.+.+...      +++|.+.........|.+|+.++..++|+||+++++++...  +..++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~------~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l   76 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ--RPIYI   76 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCc------EEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccC--CCcEE
Confidence            46667899999999999998876543      78887775444456799999999999999999999999774  67899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++.....  .+++..++.++.||+.||.|||+.   +|+|+||||+||+
T Consensus        77 v~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nil  132 (256)
T cd05113          77 VTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCL  132 (256)
T ss_pred             EEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEE
Confidence            9999999999999976432  589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.86  E-value=3e-21  Score=171.64  Aligned_cols=131  Identities=18%  Similarity=0.314  Sum_probs=113.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.++..      +++|.+.......++|.+|+.++++++|+||+++++++...  +..
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~------v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   76 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTP------VAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE--EPI   76 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeE------EEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecC--CCe
Confidence            3457778999999999999999866543      78888875555567799999999999999999999998874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+++|.+++.... +..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        77 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil  135 (261)
T cd05068          77 YIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVL  135 (261)
T ss_pred             eeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEE
Confidence            99999999999999998754 34589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.86  E-value=1.9e-21  Score=197.56  Aligned_cols=141  Identities=13%  Similarity=0.106  Sum_probs=116.0

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ....++|.+.+.||+|+||.||++.+..+...     +++|.+..   .......|..|+.+|..|+|+|||+++++|..
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~-----vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d   83 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEF-----FCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN   83 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeE-----EEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe
Confidence            34456788899999999999999999876642     66666652   33445679999999999999999999999876


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGP----FQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~----~~IiHrDlKp~NI~  316 (316)
                      ...+.+||||||+.+|+|.++|.... ....+++..++.|+.||+.||.|||+.+.    .+||||||||+||+
T Consensus        84 e~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL  157 (1021)
T PTZ00266         84 KANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF  157 (1021)
T ss_pred             cCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence            54578999999999999999997632 12359999999999999999999998531    25999999999984

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.86  E-value=3.5e-21  Score=177.33  Aligned_cols=126  Identities=15%  Similarity=0.121  Sum_probs=107.3

Q ss_pred             cceeeec--CceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          180 DRCISEG--LSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       180 ~~~IG~G--~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      .++||+|  +|++||++....++.     .+++|.+...   ....+.+.+|+.+++.++|+||++++++|..+  +..+
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~--~~~~   75 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGE-----YVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD--NELW   75 (327)
T ss_pred             hhhccccccceEEEEEEeecccCc-----EEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC--CEEE
Confidence            3789999  689999999987765     3888888632   23345677899999999999999999999885  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++.... ...+++..++.++.|++.||+|||++   +|+||||||+||+
T Consensus        76 lv~e~~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil  133 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL  133 (327)
T ss_pred             EEEeccCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEE
Confidence            9999999999999997643 22489999999999999999999995   6999999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.86  E-value=4.6e-21  Score=172.51  Aligned_cols=132  Identities=17%  Similarity=0.241  Sum_probs=110.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECC----CCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGD----DASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~----~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .+|...+.||+|+||.||++....    .+.     .+++|.+.. .....+.|.+|+++++.++|+||+++++++...+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGE-----VVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCc-----EEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence            467777999999999999998532    222     378888764 3344667999999999999999999999887654


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...+++||||+++|+|.+++....  ..+++..++.++.|++.||.|||++   +|+||||||+||.
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nil  140 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNIL  140 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEE
Confidence            567899999999999999997643  2489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PHA02988 hypothetical protein; Provisional

Probab=99.86  E-value=4.9e-21  Score=173.04  Aligned_cols=140  Identities=17%  Similarity=0.298  Sum_probs=113.3

Q ss_pred             CCccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh----hHhHHHHHHHHHhCCC
Q 021173          160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG----VKEFINDVNTLASLQH  235 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~H  235 (316)
                      ...+.++.+++.     ......||+|++|.||+|.+.+.       .|++|.+......    .+.|.+|+.+|.+++|
T Consensus        10 ~~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h   77 (283)
T PHA02988         10 NDIKCIESDDID-----KYTSVLIKENDQNSIYKGIFNNK-------EVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS   77 (283)
T ss_pred             CcceecCHHHcC-----CCCCeEEeeCCceEEEEEEECCE-------EEEEEeccccccccHHHHHHHHHHHHHHHhcCC
Confidence            345556666663     23337899999999999998543       2788877643222    4678899999999999


Q ss_pred             CCcceeeeEEEc--CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCC
Q 021173          236 PNLCKLLGFHAR--DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMI  313 (316)
Q Consensus       236 pnIv~l~g~~~~--~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~  313 (316)
                      +||++++|++.+  ++...++|||||+.+|+|.+++....   .+++...+.++.+++.||.|||..  .+++||||||+
T Consensus        78 ~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~  152 (283)
T PHA02988         78 NNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSV  152 (283)
T ss_pred             CCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChh
Confidence            999999999876  43467899999999999999998753   589999999999999999999984  25789999999


Q ss_pred             CCC
Q 021173          314 KTE  316 (316)
Q Consensus       314 NI~  316 (316)
                      ||+
T Consensus       153 nil  155 (283)
T PHA02988        153 SFL  155 (283)
T ss_pred             hEE
Confidence            984

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.86  E-value=2.7e-21  Score=172.31  Aligned_cols=129  Identities=14%  Similarity=0.287  Sum_probs=110.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.++..      +++|.+.......+.|.+|+++++.++|+||+++++++.+   +..+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~------valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~   76 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTR------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIY   76 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCce------EEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECC---CCcE
Confidence            457788999999999999998876643      7888887544455679999999999999999999998754   6689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++.... +..+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nil  134 (262)
T cd05071          77 IVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANIL  134 (262)
T ss_pred             EEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEE
Confidence            9999999999999998643 23589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.86  E-value=3e-21  Score=171.54  Aligned_cols=130  Identities=18%  Similarity=0.297  Sum_probs=112.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|...++..      +++|.+.........|.+|+.++++++|+||+++++++..   +..
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~------~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~   75 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYYNGHTK------VAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQ---EPI   75 (260)
T ss_pred             hHHceeeeeeccCccceEEeeecCCCce------EEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEcc---CCc
Confidence            3567788999999999999999876653      8888887655556789999999999999999999998754   678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|.+++.... +..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~  134 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANIL  134 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEE
Confidence            99999999999999987643 33589999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.86  E-value=4.5e-21  Score=176.93  Aligned_cols=123  Identities=13%  Similarity=0.167  Sum_probs=105.5

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||++.+..++.     .+++|.+..    .......+..|..++..+ +|+||+++++++.+.  +.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~-----~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~--~~~~l   73 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRR-----IYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE--SRLFF   73 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC--CEEEE
Confidence            469999999999999987664     378887763    223445688999999998 699999999999874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|.+++....   .+++..+..|+.|++.||.|||+.   +|+||||||+||+
T Consensus        74 v~e~~~~g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  128 (329)
T cd05588          74 VIEFVSGGDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVL  128 (329)
T ss_pred             EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeE
Confidence            999999999999887643   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.86  E-value=2.9e-21  Score=179.23  Aligned_cols=138  Identities=15%  Similarity=0.190  Sum_probs=109.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+.+.........+++|.+...  ......+.+|+.+|..+ +|+||++++++|... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-~~   85 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-GG   85 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-CC
Confidence            467788999999999999998643222111123888888642  33456788999999999 689999999988765 35


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC---------------------------------------------------------
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD---------------------------------------------------------  274 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------  274 (316)
                      ..++||||+.+|+|.+++.....                                                         
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            78999999999999999875320                                                         


Q ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 -------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 -------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                             ...+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil  211 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNIL  211 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEE
Confidence                   12368888999999999999999995   7999999999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.86  E-value=4.2e-21  Score=176.64  Aligned_cols=128  Identities=19%  Similarity=0.135  Sum_probs=107.8

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCC-CcceeeeEEEcCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHP-NLCKLLGFHARDGS  250 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~Hp-nIv~l~g~~~~~~~  250 (316)
                      +|...+.||+|+||.||+|.+.+++.     .+++|.+..    .....+.+..|+.++..+.|+ +|+.+++++.+.  
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--   73 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDE-----LYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM--   73 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC--
Confidence            47778999999999999999987664     378887753    234456788999999999765 577888888764  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nil  133 (324)
T cd05587          74 DRLYFVMEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVM  133 (324)
T ss_pred             CEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeE
Confidence            78999999999999999997654   489999999999999999999995   7999999999984

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.86  E-value=3.7e-21  Score=170.29  Aligned_cols=128  Identities=16%  Similarity=0.304  Sum_probs=106.5

Q ss_pred             ceeeecCceEEEEEEECCCCc-----eeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDAS-----TSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+..+..     ......+++|.+.........|.+|+.+++.++|+||+++++++..   +..++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~l   77 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR---DENIM   77 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec---CCcEE
Confidence            468999999999999976551     1122346777766443336789999999999999999999999876   55799


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++.....  .+++..++.++.||+.||.|||++   +|+||||||+||+
T Consensus        78 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nil  133 (259)
T cd05037          78 VEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNIL  133 (259)
T ss_pred             EEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEE
Confidence            9999999999999987532  589999999999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.86  E-value=6.1e-21  Score=174.25  Aligned_cols=130  Identities=17%  Similarity=0.206  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..  ......++.+|++++.+++|+||++++++|.++  +.
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~   73 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGL-----IMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD--GE   73 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCe-----EEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--CE
Confidence            468888999999999999999887664     266676653  233456688999999999999999999999874  89


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||||+++|+|.+++....   .+++..+..++.|++.||.|||+.  .+|+||||||+||+
T Consensus        74 ~~lv~ey~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil  132 (308)
T cd06615          74 ISICMEHMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNIL  132 (308)
T ss_pred             EEEEeeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEE
Confidence            999999999999999998653   589999999999999999999984  26999999999984

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.85  E-value=4.3e-21  Score=170.24  Aligned_cols=128  Identities=13%  Similarity=0.238  Sum_probs=109.6

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +|...+.||+|+||.||++.+..+..      +++|.+.........|.+|+.+++.++|+||+++++++...  +..++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~------~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~l   76 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKID------VAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ--RPIFI   76 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCcc------EEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC--CceEE
Confidence            46667999999999999998876543      77787764444456788999999999999999999998774  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++++|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        77 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~  132 (256)
T cd05059          77 VTEYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCL  132 (256)
T ss_pred             EEecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEE
Confidence            999999999999998653  2589999999999999999999995   6999999999983

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=7.7e-22  Score=184.93  Aligned_cols=127  Identities=20%  Similarity=0.264  Sum_probs=112.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhh-HhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      .|..-..||+|+.|.||.+....++..     ||+|++....+.. +-+++|+.+|+..+|+|||.++..|...  +.+|
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~-----VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~--deLW  346 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQE-----VAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG--DELW  346 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCce-----EEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc--ceeE
Confidence            466668999999999999998877753     8999998655544 4478999999999999999999988774  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+||+|.+.+....    +++.++..|++++++||+|||.+   +|||||||.+||+
T Consensus       347 VVMEym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnIL  401 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNIL  401 (550)
T ss_pred             EEEeecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeE
Confidence            9999999999999988753    99999999999999999999995   6999999999995

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.85  E-value=5.2e-21  Score=169.96  Aligned_cols=129  Identities=15%  Similarity=0.287  Sum_probs=110.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.++..      +++|.+.......+.|.+|+.++++++|+||+++++++..   +..+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~------~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~---~~~~   76 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTK------VAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSE---EPIY   76 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCce------eEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECC---CCcE
Confidence            356777999999999999998876553      7778776544455679999999999999999999998754   5689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+++|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nil  134 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANIL  134 (260)
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEE
Confidence            9999999999999998643 33589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.85  E-value=6.1e-21  Score=173.89  Aligned_cols=134  Identities=21%  Similarity=0.315  Sum_probs=110.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++..   ..+++|.+..  .......|.+|+.++.++ +|+||+++++++..+  +
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~--~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--G   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCce---eeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC--C
Confidence            4677779999999999999998665421   2356666553  334556789999999999 899999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..|+||||+++|+|.+++.....             ...+++.+++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nil  156 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL  156 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEE
Confidence            89999999999999999975421             23588999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.85  E-value=7.6e-21  Score=171.08  Aligned_cols=133  Identities=14%  Similarity=0.221  Sum_probs=108.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++... ...+++|.+...  .....++..|+.++..+.|+||+++++++..   ..
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~---~~   82 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSI-KIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG---AS   82 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCce-eeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC---Cc
Confidence            35666799999999999999986554422 223677777532  2334678889999999999999999998864   56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++++||+.+|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nil  141 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNIL  141 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEE
Confidence            789999999999999998643  2589999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.85  E-value=5.9e-21  Score=170.32  Aligned_cols=129  Identities=17%  Similarity=0.272  Sum_probs=105.6

Q ss_pred             ceeeecCceEEEEEEECCCCc-------eeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          181 RCISEGLSSVMYRASFGDDAS-------TSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~-------~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +.||+|+||.||+|.+.....       ..+.+.+++|.+... ......|..|+.+++.++||||+++++++..+  ..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~--~~   78 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRD--VE   78 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CC
Confidence            368999999999998753321       123345788877643 23345788999999999999999999999874  77


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|..++....  ..+++..++.|+.||+.||+|||+.   +|+||||||+||+
T Consensus        79 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil  137 (262)
T cd05077          79 NIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNIL  137 (262)
T ss_pred             CEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEE
Confidence            899999999999999887643  2589999999999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.85  E-value=6.7e-21  Score=169.38  Aligned_cols=129  Identities=15%  Similarity=0.257  Sum_probs=110.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|.....||+|+||.||++.+..+..      +++|.+.......+.|.+|+.+++.++|+||+++++++..   +..+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~------~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~   76 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTK------VAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE---EPIY   76 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCce------EEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcC---CCcE
Confidence            357777999999999999999877653      7788776544555678999999999999999999998754   6689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++.... ...+++..++.++.|++.||.|||+.   +|+|+||||+||+
T Consensus        77 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nil  134 (260)
T cd05069          77 IVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANIL  134 (260)
T ss_pred             EEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEE
Confidence            9999999999999998643 33589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.85  E-value=3.8e-21  Score=173.33  Aligned_cols=129  Identities=12%  Similarity=0.160  Sum_probs=107.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|++..++..     +++|.+...   ....+.+.+|+.+++.++|+||+++++++..+  +
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   73 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEI-----VAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRR--G   73 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcE-----EEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecC--C
Confidence            4688889999999999999999876652     777776532   23356688999999999999999999998874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.++.|..+....   ..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil  132 (287)
T cd07848          74 KLYLVFEYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLL  132 (287)
T ss_pred             EEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            899999999987776554432   2589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.85  E-value=5.7e-21  Score=171.38  Aligned_cols=139  Identities=14%  Similarity=0.262  Sum_probs=111.4

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..++|...+.||+|+||.||+|.+.+.........+++|.+...  .....+|.+|+.+++.++|+||+++++++.+.  
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~--   81 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG--   81 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence            45678888999999999999998754221111124788877532  23445689999999999999999999998764  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD-------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~-------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++||||+.+|+|.+++.....       ...+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil  151 (277)
T cd05062          82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM  151 (277)
T ss_pred             CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEE
Confidence            789999999999999999975321       12367889999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.85  E-value=7.7e-21  Score=173.20  Aligned_cols=136  Identities=16%  Similarity=0.244  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||++.+...........+++|.+...  ....+.+.+|+.+++++ +|+||+++++++...  +
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~  112 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG--G  112 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC--C
Confidence            468888999999999999998643221111234788877642  33456789999999999 799999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+|+|.+++.... ...+++.+++.++.|++.||.|||+.   +|+|+||||+||+
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil  173 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVL  173 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEE
Confidence            8999999999999999998643 23489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.85  E-value=8.7e-21  Score=169.38  Aligned_cols=127  Identities=20%  Similarity=0.244  Sum_probs=103.4

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      .||+|+||.||+|....+..   ...+++|.+..  .......|.+|+.+++.++|+||+++++++...  +..+|||||
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~---~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~--~~~~lv~e~   76 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMS---KARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES--IPYLLVLEF   76 (269)
T ss_pred             cCCccCCceEEEEEEecCCC---CeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC--CceEEEEEe
Confidence            58999999999998654322   12367776653  233456789999999999999999999999874  789999999


Q ss_pred             CCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~--~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|+|.++|.....  ...+++...+.++.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  132 (269)
T cd05042          77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQ  132 (269)
T ss_pred             CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheE
Confidence            999999999987432  22357888899999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.85  E-value=5.7e-21  Score=176.20  Aligned_cols=131  Identities=15%  Similarity=0.121  Sum_probs=106.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-----CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-----SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDG  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~  249 (316)
                      +|...+.||+|+||.||++....+....  ..+++|.+..     .....+.+..|+.++..++ |+||+.+++++..+ 
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-   77 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTG--KLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE-   77 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCC--CEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC-
Confidence            4777899999999999999874321100  1267776642     2233456889999999994 99999999988774 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.++|||||+.+|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        78 -~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil  137 (332)
T cd05614          78 -AKLHLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENIL  137 (332)
T ss_pred             -CEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeE
Confidence             78999999999999999997654   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.85  E-value=9.1e-21  Score=169.16  Aligned_cols=137  Identities=15%  Similarity=0.172  Sum_probs=114.0

Q ss_pred             HHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          170 VAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       170 i~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ++..++++.....||+|+||.||+|.+.+++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++..+
T Consensus         3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   77 (268)
T cd06624           3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQV-----RIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN   77 (268)
T ss_pred             cccccccCCceEEEecCCceEEEEeEecCCCc-----EEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC
Confidence            45566777777899999999999999877654     377777653 334566799999999999999999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +..++||||+.+++|.+++.........++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        78 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil  140 (268)
T cd06624          78 --GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVL  140 (268)
T ss_pred             --CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEE
Confidence              88999999999999999998643211127888999999999999999994   7999999999984

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.85  E-value=1e-20  Score=168.72  Aligned_cols=133  Identities=17%  Similarity=0.289  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+...+..  ...+++|.+..  .......|.+|+.+++.++|+||+++++++...  +.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~--~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   79 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKK--EIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS--RP   79 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCC--cceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC--Cc
Confidence            5688889999999999999998644211  12378887763  233456799999999999999999999998774  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+|+||||+||+
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nil  138 (266)
T cd05033          80 VMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNIL  138 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEE
Confidence            999999999999999997653  2589999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.85  E-value=7.5e-21  Score=175.50  Aligned_cols=123  Identities=12%  Similarity=0.159  Sum_probs=104.5

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||++.+..++.     .+++|.+..    .......+.+|+.++.++ +|+||+++++++...  +..+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~~~~l   73 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTER-----IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE--SRLFF   73 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC--CEEEE
Confidence            469999999999999987665     267777653    233445678899988877 799999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|..++....   .+++..+..|+.|++.||.|||++   +|+||||||+||+
T Consensus        74 v~E~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nil  128 (329)
T cd05618          74 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVL  128 (329)
T ss_pred             EEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEE
Confidence            999999999999887653   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.85  E-value=5.8e-21  Score=170.14  Aligned_cols=129  Identities=30%  Similarity=0.490  Sum_probs=106.0

Q ss_pred             cceeeecCceEEEEEEECC-CCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          180 DRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      .+.||.|.||.||+|.+.. ...  ....|+||.+..  .....+.|.+|++++++++|+||++++|+|...  +..++|
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~--~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~--~~~~lv   79 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDND--KNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN--EPLFLV   79 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTS--SEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS--SSEEEE
T ss_pred             eeEEccCCCcEEEEEEEEcccCC--CCEEEEEEEeccccccccceeeeeccccccccccccccccccccccc--cccccc
Confidence            4789999999999999983 221  223588898864  334478899999999999999999999999963  679999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||+++|+|.++|.... ...+++..++.|+.||+.||.|||+.   +|+|+||+++||.
T Consensus        80 ~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nil  135 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNIL  135 (259)
T ss_dssp             EE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEE
T ss_pred             ccccccccccccccccc-cccccccccccccccccccccccccc---ccccccccccccc
Confidence            99999999999999872 33599999999999999999999995   6999999999983

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.85  E-value=6.6e-21  Score=175.11  Aligned_cols=123  Identities=19%  Similarity=0.182  Sum_probs=104.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ++||+|+||.||+|.+..++.     .+++|.+..    .......+..|..++..+ +|+||+.+++++...  +..||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~--~~~~l   73 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDE-----VYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK--DRLFF   73 (321)
T ss_pred             CccccCCCeEEEEEEECCCCC-----EEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CeEEE
Confidence            469999999999999987664     377887753    233445678899999876 799999999999874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|..++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        74 v~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nil  128 (321)
T cd05591          74 VMEYVNGGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNIL  128 (321)
T ss_pred             EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeE
Confidence            999999999999987653   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.85  E-value=3.4e-21  Score=171.01  Aligned_cols=131  Identities=18%  Similarity=0.291  Sum_probs=113.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch-hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..+|...+.||.|+||.||+|.+.++..      +++|.+..... ....+.+|+.+++.++|+||+++++++.+.  +.
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~------~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   76 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVR------VAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG--EP   76 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCc------EEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecC--CC
Confidence            4567778999999999999999988543      77787764433 456789999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++.... +..+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nil  136 (261)
T cd05148          77 VYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNIL  136 (261)
T ss_pred             eEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEE
Confidence            999999999999999998754 34589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.85  E-value=6.1e-21  Score=175.55  Aligned_cols=126  Identities=18%  Similarity=0.263  Sum_probs=104.2

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHH---HhCCCCCcceeeeEEEcCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTL---ASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l---~~l~HpnIv~l~g~~~~~~  249 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+...    ....+.+.+|+.++   +.++|+||+++++++... 
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~-   74 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGE-----LYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE-   74 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC-
Confidence            4556899999999999999877654     3788877532    23345566776655   566799999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..||||||+.+|+|..++...    .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        75 -~~~~lv~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nil  133 (324)
T cd05589          75 -DHVCFVMEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLL  133 (324)
T ss_pred             -CEEEEEEcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeE
Confidence             8899999999999999888653    499999999999999999999995   7999999999984

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.85  E-value=9.9e-21  Score=170.01  Aligned_cols=133  Identities=17%  Similarity=0.291  Sum_probs=110.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++... ...|++|.+..  .......+.+|+.++..++|+||+.+++++..   ..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~-~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~   82 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENV-KIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---ST   82 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCcc-ceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC---CC
Confidence            45777799999999999999976554422 12367887763  33445678999999999999999999999976   56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|||+++|+|.+++....  ..+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus        83 ~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil  141 (279)
T cd05109          83 VQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVL  141 (279)
T ss_pred             cEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence            789999999999999998643  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.85  E-value=7.1e-21  Score=175.49  Aligned_cols=128  Identities=12%  Similarity=0.208  Sum_probs=106.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC---C
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---S  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---~  250 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++....   .
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   76 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGE-----KVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREF   76 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCC-----EEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCC
Confidence            6677999999999999999876654     378887753   2233456889999999999999999999886532   1


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||||. ++|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl  135 (338)
T cd07859          77 KDIYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNIL  135 (338)
T ss_pred             ceEEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence            35899999995 69999987643   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.85  E-value=6.4e-21  Score=175.43  Aligned_cols=126  Identities=16%  Similarity=0.131  Sum_probs=103.4

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||++....+....  ..+++|.+..     .......+.+|+.+|+.++|+||+++++++..+  +..|+
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~--~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~--~~~~l   77 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTG--KIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG--GKLYL   77 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCC--CEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC--CeEEE
Confidence            67999999999999874321100  1377777653     223345678999999999999999999999874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++....   .+.+..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        78 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  132 (323)
T cd05584          78 ILEYLSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENIL  132 (323)
T ss_pred             EEeCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence            999999999999997654   488889999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.85  E-value=9.6e-21  Score=167.37  Aligned_cols=124  Identities=15%  Similarity=0.296  Sum_probs=105.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      +.||+|+||.||+|.+..++.     .+++|....  .......|.+|+++++.++|+||++++++|...  +..+||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e   73 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNT-----PVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVME   73 (252)
T ss_pred             CccCcccCccEEEEEEecCCc-----eEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC--CCeEEEEe
Confidence            368999999999999876554     277776653  234456799999999999999999999999874  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+++|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil  126 (252)
T cd05084          74 LVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCL  126 (252)
T ss_pred             eccCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEE
Confidence            999999999997642  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.85  E-value=7.1e-21  Score=174.61  Aligned_cols=123  Identities=15%  Similarity=0.089  Sum_probs=103.2

Q ss_pred             ceeeecCceEEEEEEEC---CCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          181 RCISEGLSSVMYRASFG---DDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~---~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      +.||+|+||.||++...   .++.     .+++|.+...   ......+.+|+++|++++|+||+++++++.++  +..|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~   74 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQ-----LYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE--GKLY   74 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC--CEEE
Confidence            67999999999998863   2222     3777777532   22345578899999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||+++|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        75 lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  130 (318)
T cd05582          75 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENIL  130 (318)
T ss_pred             EEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeE
Confidence            9999999999999997643   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.85  E-value=7e-21  Score=171.46  Aligned_cols=124  Identities=15%  Similarity=0.164  Sum_probs=103.8

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||+|+||+||++.+..++.     .+++|.+...    ....+.+..|+.+++.++|+||+.+++++...  +..+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~~~lv~e   73 (280)
T cd05608           1 LGKGGFGEVSACQMRATGK-----LYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK--TDLCLVMT   73 (280)
T ss_pred             CCCCCceeEEEEEEccCCc-----EEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC--CeEEEEEe
Confidence            6999999999999876654     3778877532    22345678999999999999999999988774  78999999


Q ss_pred             cCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++.... ....+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  129 (280)
T cd05608          74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVL  129 (280)
T ss_pred             CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            999999998886432 234689999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=1.1e-20  Score=167.84  Aligned_cols=131  Identities=16%  Similarity=0.301  Sum_probs=114.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      -++|...+.||+|+||.||++.+.++..      +++|.+.......+++.+|+.+++.++|+||+++++++...  ...
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~------~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   76 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWNGTTK------VAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEE--EPI   76 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEcCCce------EEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecC--Cce
Confidence            3568888999999999999999876543      78888876555667899999999999999999999998774  779


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++++|.+++.... +..+++..+..++.|++.||.|||++   +|+|+||||+||.
T Consensus        77 ~~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nil  135 (261)
T cd05034          77 YIVTEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNIL  135 (261)
T ss_pred             EEEEeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEE
Confidence            99999999999999998753 33589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.85  E-value=1.3e-20  Score=167.90  Aligned_cols=129  Identities=15%  Similarity=0.146  Sum_probs=110.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+.. .......+.+|+.+++.++|+||+++++++..+  +..
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~--~~~   81 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGE-----LAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR--EKL   81 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCe-----EEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC--CEE
Confidence            468888999999999999999876654     377777653 223445688999999999999999999999874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        82 ~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil  138 (267)
T cd06646          82 WICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANIL  138 (267)
T ss_pred             EEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            99999999999999987643   589999999999999999999994   7999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.85  E-value=7.7e-21  Score=174.48  Aligned_cols=123  Identities=17%  Similarity=0.208  Sum_probs=103.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+..++.     .+|+|.+...    ......+..|..++..+ +|+||+++++++.+.  +.++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~--~~~~l   73 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQ-----FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK--ENLFF   73 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC--CEEEE
Confidence            469999999999999987664     2788877532    23345577788888765 899999999999874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 v~ey~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil  128 (316)
T cd05619          74 VMEYLNGGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNIL  128 (316)
T ss_pred             EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEE
Confidence            999999999999997643   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.85  E-value=1.1e-20  Score=167.38  Aligned_cols=129  Identities=19%  Similarity=0.332  Sum_probs=112.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||.|+||.||+|...+..       +++|.+.......+++.+|+.+++.++|+||+++++++.+.  +..+
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~~~~-------v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~   76 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYRGQK-------VAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQG--NPLY   76 (256)
T ss_pred             hhccceeeeecCCCceEEEEEecCcE-------EEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCC--CCeE
Confidence            46777799999999999999987532       78888875555567899999999999999999999998873  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++++|.+++.... ...+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        77 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nil  134 (256)
T cd05039          77 IVTEYMAKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVL  134 (256)
T ss_pred             EEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEE
Confidence            9999999999999998654 23589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.85  E-value=1.2e-20  Score=168.44  Aligned_cols=133  Identities=14%  Similarity=0.249  Sum_probs=110.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++..  ...+++|.+...  ....+.|.+|+.++..++|+||+++++++..+  +.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   79 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKR--EIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--KP   79 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCC--ceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--Cc
Confidence            4577789999999999999987533221  113677777532  33456799999999999999999999998774  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++....  ..+++.+++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nil  138 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNIL  138 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEE
Confidence            999999999999999998653  2589999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.85  E-value=7.9e-21  Score=184.03  Aligned_cols=130  Identities=15%  Similarity=0.145  Sum_probs=107.9

Q ss_pred             CCCcceeeecCceEEEEEEECCC-CceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDD-ASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~-~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||++....+ +.     .+++|.+.. .......+.+|+.+|+.++|+|||+++++|..+  +..|
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~-----~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~--~~~~  141 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKE-----KVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSD--DKLL  141 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCe-----EEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC--CEEE
Confidence            67779999999999999987655 32     255565542 334445678899999999999999999999884  8999


Q ss_pred             EEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||+++|+|.++|.... ....+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIl  201 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIF  201 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEE
Confidence            9999999999999886532 133589999999999999999999994   7999999999984

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=7.9e-21  Score=179.51  Aligned_cols=123  Identities=14%  Similarity=0.178  Sum_probs=106.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|...     ...+.+|+.+|+.++|+|||++++++...  +..+
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~-----~vaiK~~~-----~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~~  159 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCE-----HVVIKAGQ-----RGGTATEAHILRAINHPSIIQLKGTFTYN--KFTC  159 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCC-----EEEEechh-----hhhhHHHHHHHHhCCCCCCCCEeEEEEEC--CeeE
Confidence            579999999999999999999987765     37887543     24578999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||++. ++|..++....   .+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       160 lv~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIl  214 (391)
T PHA03212        160 LILPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIF  214 (391)
T ss_pred             EEEecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEE
Confidence            9999995 68998887653   489999999999999999999995   6999999999984

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.85  E-value=1.4e-20  Score=169.66  Aligned_cols=135  Identities=20%  Similarity=0.294  Sum_probs=109.8

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .|...+.||+|+||.||++.+....... ...+++|.+...  ......|.+|+.+++.++|+||+++++++...+....
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~-~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNT-GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCc-cceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            4667789999999999999864211100 113788887632  3344679999999999999999999999987545678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++++|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil  141 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL  141 (284)
T ss_pred             EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEE
Confidence            99999999999999997643  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.85  E-value=1e-20  Score=173.61  Aligned_cols=123  Identities=19%  Similarity=0.205  Sum_probs=102.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ++||+|+||.||+|.+.+++.     .+|+|.+...    ....+.+..|..++..+ +|+||+++++++...  +.++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~--~~~~l   73 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNE-----FFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK--EHLFF   73 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEE
Confidence            469999999999999987665     2778877532    23345566777777755 799999999998874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        74 v~e~~~gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nil  128 (316)
T cd05592          74 VMEYLNGGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVL  128 (316)
T ss_pred             EEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeE
Confidence            999999999999997653   489999999999999999999995   7999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.85  E-value=1.1e-20  Score=173.84  Aligned_cols=128  Identities=19%  Similarity=0.138  Sum_probs=107.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  250 (316)
                      +|...+.||+|+||.||+|....++.     .+++|.+...    ......+..|..++..+ +|++|+.+++++.+.  
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--   73 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDE-----LYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM--   73 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC--
Confidence            47778999999999999999987664     2777776532    23345577888888887 588999999988874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.++|||||+++|+|.+++....   .+++..++.++.||+.||+|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nil  133 (323)
T cd05616          74 DRLYFVMEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVM  133 (323)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeE
Confidence            88999999999999999987653   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.85  E-value=1.3e-20  Score=167.42  Aligned_cols=129  Identities=19%  Similarity=0.332  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||++.+.++..      +++|.+.........|.+|+.+++.++|+||+++++++.+   ...+
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~------~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~   76 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTK------VAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK---EPIY   76 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCcc------EEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC---CCeE
Confidence            467788999999999999998766543      7788777555556789999999999999999999998876   6789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||+.+|+|.+++.... +..+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        77 ~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~  134 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANIL  134 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEE
Confidence            9999999999999998753 34589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.85  E-value=1.2e-20  Score=170.41  Aligned_cols=129  Identities=17%  Similarity=0.165  Sum_probs=108.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||++.+..++.     .+++|.+....    .....+.+|+++|+.++|+||+.+++++..+  +.
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~   74 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGK-----MYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK--DA   74 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCc-----EEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC--CE
Confidence            5566899999999999999977654     37788775322    2234578899999999999999999888774  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++.... ...+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nil  134 (285)
T cd05632          75 LCLVLTIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENIL  134 (285)
T ss_pred             EEEEEEeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEE
Confidence            999999999999998887643 23599999999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.85  E-value=9.2e-21  Score=174.19  Aligned_cols=123  Identities=19%  Similarity=0.204  Sum_probs=104.6

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+..++.     .+++|.+..    .......+..|..++..+ +|+||+++++++...  +.+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~--~~~~i   73 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGR-----LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP--DRLFF   73 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCC-----EEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC--CEEEE
Confidence            469999999999999877654     278887753    223456678899998877 699999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|.+++....   .+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        74 v~Ey~~~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIl  128 (320)
T cd05590          74 VMEFVNGGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVL  128 (320)
T ss_pred             EEcCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeE
Confidence            999999999999987653   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.85  E-value=9.4e-21  Score=173.85  Aligned_cols=123  Identities=19%  Similarity=0.213  Sum_probs=103.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+..++.     .+++|.+...    ......+..|..++..+ +|+||+++++++.+.  +.+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--~~~~l   73 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGE-----YFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTK--EHLFF   73 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeC--CEEEE
Confidence            469999999999999987665     3778877532    23345677788888765 899999999999874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++....   .+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        74 v~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil  128 (316)
T cd05620          74 VMEFLNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVM  128 (316)
T ss_pred             EECCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeE
Confidence            999999999999987643   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.85  E-value=3.4e-20  Score=178.26  Aligned_cols=125  Identities=16%  Similarity=0.216  Sum_probs=107.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ..+|...+.||+|+||.||++.+...+.     .|++|...     ...+.+|+++|++|+|+|||++++++...  +..
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~-----~vavK~~~-----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~--~~~  235 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQ-----RVVVKAGW-----YASSVHEARLLRRLSHPAVLALLDVRVVG--GLT  235 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCC-----EEEEeccc-----ccCHHHHHHHHHHCCCCCCCcEEEEEEEC--CEE
Confidence            4578888999999999999999987654     37777532     23567899999999999999999998874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+. ++|.+++....  ..++|..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus       236 ~lv~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NIL  292 (461)
T PHA03211        236 CLVLPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVL  292 (461)
T ss_pred             EEEEEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEE
Confidence            99999995 69998887643  2599999999999999999999995   6999999999984

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.85  E-value=1.4e-20  Score=169.39  Aligned_cols=132  Identities=19%  Similarity=0.242  Sum_probs=106.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||+||++.+....... ...+++|.+...  ......|.+|+++|++++|+||+++++++.......++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGT-GEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQ   84 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCC-CceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEE
Confidence            366789999999999887643211100 013788877643  23456789999999999999999999998765446789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++...    .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        85 lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nil  139 (283)
T cd05080          85 LIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVL  139 (283)
T ss_pred             EEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEE
Confidence            999999999999999764    399999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=2.1e-21  Score=180.35  Aligned_cols=132  Identities=17%  Similarity=0.206  Sum_probs=112.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...++||+|+||.++.++.+....     .+++|.+..   .....+...+|+.++++++|||||.+.+.|..+ ..
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~-----~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~-~~   77 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDK-----LYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED-GQ   77 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCc-----eEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-Cc
Confidence            467777999999999999998876654     377777763   233344678999999999999999999999886 24


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||+||+||+|.+.|.... +..|+++.+..|+.|++.||.|||+   .+|+|||||+.||.
T Consensus        78 ~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nif  138 (426)
T KOG0589|consen   78 LLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIF  138 (426)
T ss_pred             eEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhh
Confidence            4999999999999999999876 5579999999999999999999997   47999999999983

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.85  E-value=3.2e-21  Score=171.38  Aligned_cols=129  Identities=17%  Similarity=0.226  Sum_probs=106.6

Q ss_pred             ceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.||+|+||.||+|.....+.  ......+++|.+... ....+.|..|+.+++.++|+||+++++++...  +..++||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~--~~~~lv~   78 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG--DESIMVQ   78 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC--CCcEEEE
Confidence            368999999999998865432  122234777776533 33456788999999999999999999999874  7789999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+.+|+|.+++....  ..+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus        79 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nil  132 (258)
T cd05078          79 EYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVL  132 (258)
T ss_pred             ecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEE
Confidence            9999999999998753  2589999999999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.85  E-value=5e-21  Score=192.95  Aligned_cols=135  Identities=17%  Similarity=0.311  Sum_probs=117.1

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ....+.||+|.||.||.|...+-......+.|++|.+..  +.+...+|++|..+|++++|||||+|+|+|.+.  ...+
T Consensus       694 v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--~~~~  771 (1025)
T KOG1095|consen  694 VTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--GPPL  771 (1025)
T ss_pred             eEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC--CCcE
Confidence            344588999999999999987655433366799999984  567788999999999999999999999999994  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |++|||++|||..+|++.+.    ...+.....+.|+.|||+|+.||++   +++|||||..+|.+
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCL  834 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCL  834 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhhee
Confidence            99999999999999998631    2458899999999999999999999   57999999999974

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.84  E-value=1.1e-20  Score=170.03  Aligned_cols=136  Identities=19%  Similarity=0.265  Sum_probs=108.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|+..+.||+|+||.||+|.+...+... ...+++|.+..  .......|.+|+++++.++|+||+++++++...  +.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~-~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~   81 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDH-AQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE--QP   81 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCC-cceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC--Cc
Confidence            35667799999999999999863222100 12377887763  233446789999999999999999999998874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSD--------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~--------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .|+||||+.+|+|.+++.....              ...+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil  156 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL  156 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence            9999999999999999863210              12478999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.84  E-value=1.8e-20  Score=169.33  Aligned_cols=137  Identities=20%  Similarity=0.346  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||++.............+++|.+.. .......|.+|++++.+++|+||+++++++...  +..
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   82 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG--DPL   82 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--Ccc
Confidence            46778899999999999999864321111123478888764 334466799999999999999999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRS----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~----------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|.++|....          ....+++..++.++.|++.||+|||++   +|+||||||+||+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nil  152 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCL  152 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEE
Confidence            99999999999999997532          122489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.84  E-value=1.5e-20  Score=167.85  Aligned_cols=132  Identities=16%  Similarity=0.250  Sum_probs=110.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||+|.+...+..  ...+++|.+..  ......+|..|+.+++.++|+||+++++++.++  +..
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~~~   80 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKR--EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS--RPV   80 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCC--ceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC--Cce
Confidence            466779999999999999998655431  12377887764  334457899999999999999999999998774  788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+|+||||+||+
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nil  138 (269)
T cd05065          81 MIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNIL  138 (269)
T ss_pred             EEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEE
Confidence            99999999999999997653  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.84  E-value=1.6e-20  Score=169.70  Aligned_cols=129  Identities=16%  Similarity=0.151  Sum_probs=108.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||++.+..++.     .+++|.+...    ......+.+|+.+++.++|+||+.+++.+.+.  +.
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~--~~   74 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK--DA   74 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCc-----eEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC--CE
Confidence            5666899999999999999987664     3777776532    22335578899999999999999999998874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        75 ~~lv~e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil  134 (285)
T cd05630          75 LCLVLTLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENIL  134 (285)
T ss_pred             EEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEE
Confidence            999999999999999986543 23589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=1.9e-20  Score=168.22  Aligned_cols=133  Identities=17%  Similarity=0.297  Sum_probs=111.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .+|...+.||+|+||.||+|.+..++... +..+++|.+...  ......+.+|+.++..++|+||+++++++..   ..
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~-~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~   82 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKV-KIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS---SQ   82 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCc-ceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec---Cc
Confidence            34666799999999999999987654422 224788877643  3345679999999999999999999999986   78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++....  ..+++..++.++.|++.||+|||++   +|+||||||+||.
T Consensus        83 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil  141 (279)
T cd05057          83 VQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVL  141 (279)
T ss_pred             eEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEE
Confidence            899999999999999998753  2489999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.84  E-value=1.5e-20  Score=173.10  Aligned_cols=123  Identities=16%  Similarity=0.130  Sum_probs=101.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHH-HHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||++....++.     .+++|.+..    .......+..|.. +++.++|+||+++++++..+  +..||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~--~~~~l   73 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGK-----CYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT--EKLYF   73 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC--CEEEE
Confidence            469999999999999876654     377777653    2233445666665 56779999999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|..++....   .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        74 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIl  128 (325)
T cd05604          74 VLDFVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENIL  128 (325)
T ss_pred             EEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeE
Confidence            999999999999887643   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.84  E-value=1.2e-20  Score=173.76  Aligned_cols=128  Identities=18%  Similarity=0.134  Sum_probs=107.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGS  250 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~  250 (316)
                      +|...+.||+|+||.||+|....++.     .+|+|.+..    .....+.+..|..++..+. |++|+.+++++.++  
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~--   73 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDE-----LYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV--   73 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC--
Confidence            36677999999999999999887665     378887753    2234456888999998886 57788888888774  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~~lv~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nil  133 (323)
T cd05615          74 DRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVM  133 (323)
T ss_pred             CEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeE
Confidence            78999999999999999997653   499999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.84  E-value=9.2e-21  Score=169.25  Aligned_cols=135  Identities=19%  Similarity=0.233  Sum_probs=113.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC--
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG--  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~--  249 (316)
                      +++.|...+.||+|+||.||+|.+.+++.     .+++|.+.........+.+|+.++..+ +|+||+++++++....  
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   78 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQ-----LAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   78 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCc-----EEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence            45567777899999999999999987665     377787765445556788999999999 6999999999987632  


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        .+..|+||||+.+|+|.+++.... ...+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nil  143 (272)
T cd06637          79 GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVL  143 (272)
T ss_pred             CCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEE
Confidence              246899999999999999998643 33589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.84  E-value=2.1e-20  Score=168.08  Aligned_cols=123  Identities=12%  Similarity=0.173  Sum_probs=102.7

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||+|+||.||++....++.     .+++|.+...    ......+..|+++++.++|+||+++++++...  ...++|||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~--~~~~lv~e   73 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGK-----MYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESK--THLCLVMS   73 (277)
T ss_pred             CCCCCceEEEEEEEccCCc-----EEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecC--CeEEEEEe
Confidence            6999999999999887655     2777776521    22234566799999999999999999988774  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+|+|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 ~~~g~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nil  127 (277)
T cd05607          74 LMNGGDLKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVL  127 (277)
T ss_pred             cCCCCCHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEE
Confidence            999999998886543 33589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.84  E-value=3.6e-21  Score=180.21  Aligned_cols=130  Identities=19%  Similarity=0.319  Sum_probs=113.6

Q ss_pred             CCCccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCc
Q 021173          159 TGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL  238 (316)
Q Consensus       159 ~~~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnI  238 (316)
                      ....+.+.|++|...       +-||.|+-|.||+|++.+..       ||||+++.      .-..+|.-|++|+|+||
T Consensus       115 q~e~WeiPFe~IsEL-------eWlGSGaQGAVF~Grl~net-------VAVKKV~e------lkETdIKHLRkLkH~NI  174 (904)
T KOG4721|consen  115 QEELWEIPFEEISEL-------EWLGSGAQGAVFLGRLHNET-------VAVKKVRE------LKETDIKHLRKLKHPNI  174 (904)
T ss_pred             hhhhccCCHHHhhhh-------hhhccCcccceeeeeccCce-------ehhHHHhh------hhhhhHHHHHhccCcce
Confidence            356778888888776       78999999999999999875       78887651      22367888999999999


Q ss_pred             ceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       239 v~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.|.|+|..  ...+|||||||..|-|+..|+..+   .+.....+.|..+||.||.|||.+   .|||||||.-||+
T Consensus       175 I~FkGVCtq--sPcyCIiMEfCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiL  244 (904)
T KOG4721|consen  175 ITFKGVCTQ--SPCYCIIMEFCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNIL  244 (904)
T ss_pred             eeEeeeecC--CceeEEeeeccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceE
Confidence            999999998  488999999999999999999865   588889999999999999999996   6999999999985

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.84  E-value=1.4e-20  Score=171.81  Aligned_cols=129  Identities=14%  Similarity=0.193  Sum_probs=108.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...  ......+.+|+.+++.++|+||+++++++..+  +.
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~   78 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTEN-----LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD--KS   78 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCC-----eEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC--Ce
Confidence            457788999999999999999876654     2777776532  22334678999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+ +|.+++....  ..+++..+..++.|++.||.|||++   +|+||||||+||.
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nil  136 (309)
T cd07872          79 LTLVFEYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLL  136 (309)
T ss_pred             EEEEEeCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            9999999975 8988887653  2588999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.84  E-value=1.5e-20  Score=173.27  Aligned_cols=123  Identities=14%  Similarity=0.155  Sum_probs=105.1

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|....++.     .+++|.+...    ....+.+.+|+.++.++ +|+||+.+++++.+.  +.+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~l   73 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQ-----IYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT--SRLFL   73 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC--CEEEE
Confidence            469999999999999987765     2777777632    23455688999999888 599999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|..++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        74 v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nil  128 (327)
T cd05617          74 VIEYVNGGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVL  128 (327)
T ss_pred             EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence            999999999999887643   499999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.84  E-value=1.7e-20  Score=170.26  Aligned_cols=134  Identities=21%  Similarity=0.278  Sum_probs=109.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+.+++..   ..+++|.+..  .....+.|.+|+.++.++ +|+||+++++++...  +
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~---~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLK---MNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENR--G   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCc---ceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC--C
Confidence            4678889999999999999998765431   1245665552  234456789999999999 699999999998874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+++|+|.+++.....             ...+++..++.|+.|++.||+|||++   +|+||||||+||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil  151 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVL  151 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEE
Confidence            79999999999999999975321             12488999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.84  E-value=1.6e-20  Score=168.63  Aligned_cols=138  Identities=16%  Similarity=0.255  Sum_probs=111.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+...........+++|....  .......|.+|+.+++.++|+||+++++++.+.  +
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~   82 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFER--L   82 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--C
Confidence            456888899999999999999987621101112477887753  233445699999999999999999999988874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+|+|.+++.....    ...++|..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil  148 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCL  148 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEE
Confidence            78999999999999999976431    12589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.84  E-value=1.2e-20  Score=170.45  Aligned_cols=139  Identities=17%  Similarity=0.303  Sum_probs=109.9

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..++|...+.||+|+||.||+|...+.........+++|.+....  .....+.+|+.+++.++|+||+++++++.+.  
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--   81 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG--   81 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence            345688889999999999999986542111111247888776322  3345688999999999999999999998774  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD-------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~-------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++.....       ...+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nil  151 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCM  151 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEE
Confidence            789999999999999999975321       12356788899999999999999995   7999999999984

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.84  E-value=1.8e-20  Score=169.35  Aligned_cols=136  Identities=19%  Similarity=0.279  Sum_probs=108.8

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||+|.............+++|.+...  ......+.+|+.+++.++|+||++++++|..+  +..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD--GPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC--CCc
Confidence            46677999999999999998754221111123777776532  33456799999999999999999999998874  778


Q ss_pred             EEEEecCCCCCHHHHHhcCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCC
Q 021173          254 MLIYERLFHGSLDRLIYGRS---------------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEM  312 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~---------------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp  312 (316)
                      ++||||+.+|+|.+++....                     ....+++..++.++.|++.||.|||+.   +|+||||||
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp  155 (290)
T cd05045          79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA  155 (290)
T ss_pred             EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence            99999999999999987521                     113488999999999999999999995   699999999


Q ss_pred             CCCC
Q 021173          313 IKTE  316 (316)
Q Consensus       313 ~NI~  316 (316)
                      +||+
T Consensus       156 ~nil  159 (290)
T cd05045         156 RNVL  159 (290)
T ss_pred             heEE
Confidence            9984

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.84  E-value=9.2e-21  Score=170.61  Aligned_cols=144  Identities=23%  Similarity=0.259  Sum_probs=118.4

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeee
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG  243 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g  243 (316)
                      +.++.+....++|...+.||+|+||.||++.+..++.     .+++|.+.........+.+|+.+++.+ +|+||+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   82 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGS-----KAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYG   82 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCc-----eeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeee
Confidence            4556677788999999999999999999999877654     377777664444446788999999999 6999999999


Q ss_pred             EEEcC---CCCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARD---GSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~---~~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++...   ..+..++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil  156 (286)
T cd06638          83 MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNIL  156 (286)
T ss_pred             eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEE
Confidence            88531   2367899999999999999886421 133589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.84  E-value=2.2e-20  Score=166.94  Aligned_cols=128  Identities=22%  Similarity=0.208  Sum_probs=103.9

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      +.||+|+||.||+|.+.++...   ..+++|.+...  ......|.+|+.+++.++|+||+++++++.+.  ...++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTP---AQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV--TPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCc---eEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC--CCcEEEEE
Confidence            3689999999999987653321   23677777632  23345789999999999999999999998874  77899999


Q ss_pred             cCCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~--~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.++|.....  ...+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil  132 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCL  132 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEE
Confidence            9999999999975321  22467888889999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.84  E-value=9.3e-21  Score=175.51  Aligned_cols=138  Identities=17%  Similarity=0.240  Sum_probs=109.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+.+.........|++|.+...  ....+.+..|+.++.++ +|+||++++++|... ..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-~~   85 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP-GG   85 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC-CC
Confidence            357777999999999999998654321111123888887632  23345688999999999 799999999988764 36


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC---------------------------------------------------------
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD---------------------------------------------------------  274 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------  274 (316)
                      .++++|||+.+|+|.++|.....                                                         
T Consensus        86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (337)
T cd05054          86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL  165 (337)
T ss_pred             CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence            78999999999999999865321                                                         


Q ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 -GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 -~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ...++|..+..++.||+.||.|||++   +|+||||||+||+
T Consensus       166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nil  205 (337)
T cd05054         166 YKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNIL  205 (337)
T ss_pred             hhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEE
Confidence             12589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.84  E-value=2.2e-20  Score=167.84  Aligned_cols=136  Identities=19%  Similarity=0.335  Sum_probs=111.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||+|.+...........+++|.+...  ......|.+|+.++..++|+||+++++++...  +..
T Consensus         6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~~   83 (283)
T cd05048           6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--QPT   83 (283)
T ss_pred             HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC--Cce
Confidence            56677999999999999999865542112234788877632  33456789999999999999999999999874  778


Q ss_pred             EEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|||+++|+|.++|.....             ...+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil  156 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL  156 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence            999999999999999976421             13588999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=1.1e-20  Score=170.25  Aligned_cols=132  Identities=17%  Similarity=0.222  Sum_probs=111.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||++.+...+.     .+++|.+..  .......+.+|+.++.+++|+||+++++++..+  +..
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~   74 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGV-----TMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIE--GAV   74 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCc-----EEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC--CeE
Confidence            56677999999999999999976554     267776653  333456799999999999999999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++++|..++........+++..+..++.|++.||.|||+.  .+|+||||||+||+
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil  135 (286)
T cd06622          75 YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVL  135 (286)
T ss_pred             EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEE
Confidence            99999999999999987643233589999999999999999999974  36999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.84  E-value=6.4e-21  Score=181.37  Aligned_cols=129  Identities=13%  Similarity=0.212  Sum_probs=113.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      +-|..++-||.|+-|.|-+|+...++..     +|||.+.+    .......+.+|+.+|+.+.|||++.||+.|.+.  
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGql-----aaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~--   84 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQL-----AAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK--   84 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccce-----eEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC--
Confidence            4577779999999999999999887763     66666653    233445688999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||+||+++|.|+++|..++   .+++.++.+++.||+.|+.|+|.   ++|+||||||+|++
T Consensus        85 ~~lylvlEyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlL  144 (786)
T KOG0588|consen   85 QHLYLVLEYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLL  144 (786)
T ss_pred             ceEEEEEEecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhh
Confidence            89999999999999999999876   59999999999999999999999   68999999999974

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.84  E-value=1.4e-20  Score=172.72  Aligned_cols=123  Identities=20%  Similarity=0.219  Sum_probs=105.1

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||++.+..++.     .+++|.+..    .......+..|..++..+ +|+||+++++++.+.  +.+|+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~--~~~~l   73 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDE-----LYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK--DRLFF   73 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC--CEEEE
Confidence            469999999999999987654     378887763    223455678899999888 699999999998874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        74 v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil  128 (318)
T cd05570          74 VMEYVNGGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVL  128 (318)
T ss_pred             EEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeE
Confidence            999999999999987653   499999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.84  E-value=2.5e-20  Score=166.01  Aligned_cols=131  Identities=15%  Similarity=0.210  Sum_probs=110.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      .+|...+.||+|+||.||.+.+..++.     .+++|.+..      .....+.+.+|+.++++++|+||+++++++.+.
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGR-----ELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCc-----EEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC
Confidence            468888999999999999999877654     367776542      123346788999999999999999999988764


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....+++||||+++|+|.+++....   .+++...+.++.|++.||.|||+.   +|+|+||||+||+
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil  138 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANIL  138 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence            3467889999999999999987643   488899999999999999999995   6999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=4.1e-21  Score=183.52  Aligned_cols=130  Identities=16%  Similarity=0.191  Sum_probs=112.8

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEc
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHAR  247 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~  247 (316)
                      ..++|...++||+|.||+|+++.+++++..     +|||.+++    .....+..+.|..|+.... ||.|+.|+.+|.+
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~-----yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT  440 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEY-----YAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQT  440 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcE-----EEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccccc
Confidence            346788889999999999999999988873     88888875    3456777889999988885 9999999999988


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +++|+||||+.||++..+++..    .|++..+..|+.+|+.||+|||++   +|||||||.+||+
T Consensus       441 ~--~~l~fvmey~~Ggdm~~~~~~~----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiL  500 (694)
T KOG0694|consen  441 K--EHLFFVMEYVAGGDLMHHIHTD----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLL  500 (694)
T ss_pred             C--CeEEEEEEecCCCcEEEEEecc----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheE
Confidence            4  9999999999999955554433    499999999999999999999996   6999999999995

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.84  E-value=1.3e-20  Score=170.32  Aligned_cols=138  Identities=16%  Similarity=0.265  Sum_probs=111.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||++.+.+.........+++|.+..  .......+.+|++++.++ +|+||+++++++..+  
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--   88 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE--   88 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC--
Confidence            345777799999999999999986543111122478887764  233446689999999999 799999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+++||||+.+|+|.+++....             ....+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil  164 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL  164 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence            78999999999999999997531             134589999999999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.84  E-value=3.6e-20  Score=172.92  Aligned_cols=126  Identities=13%  Similarity=0.181  Sum_probs=106.7

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ...+|...+.||+|+||.||+|.+..++.     .+++|....     .....|+.++++++|+||+++++++...  +.
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~valK~~~~-----~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~  131 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPD-----PVVLKIGQK-----GTTLIEAMLLQNVNHPSVIRMKDTLVSG--AI  131 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCc-----eEEEEeCCc-----cccHHHHHHHHhCCCCCCcChhheEEeC--Ce
Confidence            34679999999999999999999987654     267776432     2345799999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+. |+|.+++....  ..+++..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus       132 ~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nil  189 (357)
T PHA03209        132 TCMVLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIF  189 (357)
T ss_pred             eEEEEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            999999995 58988887643  3589999999999999999999995   6999999999984

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.84  E-value=2e-20  Score=189.28  Aligned_cols=132  Identities=13%  Similarity=0.115  Sum_probs=110.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...++||+|+||.||+|.+..++.     .|++|.+...    ....++|.+|+.+++.++||||+++++++.+.  
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~-----~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~--   74 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSR-----RVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDG--   74 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCc-----EEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeC--
Confidence            568888999999999999999887654     3788877532    23356799999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD--------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~--------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||++||+|.+++.....        ...+++..++.++.||+.||+|||+.   +|+||||||+||+
T Consensus        75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNIL  145 (932)
T PRK13184         75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNIL  145 (932)
T ss_pred             CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEE
Confidence            789999999999999999874210        12366788899999999999999995   6999999999984

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.84  E-value=2.9e-20  Score=168.21  Aligned_cols=137  Identities=18%  Similarity=0.267  Sum_probs=113.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCcee-----------EEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCccee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTS-----------KKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~-----------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      .+|...+.||+|+||.||++.+.......           ....+++|.+...  ....+.|.+|+++++.++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            46778899999999999999886544321           1134788887643  3446779999999999999999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCC
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMI  313 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~--------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~  313 (316)
                      ++++..+  +..++||||+.+++|.++|.....        ...+++..++.++.|++.||.|||+.   +|+||||||+
T Consensus        85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~  159 (296)
T cd05051          85 LGVCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATR  159 (296)
T ss_pred             EEEEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchh
Confidence            9999875  789999999999999999976431        12589999999999999999999995   6999999999


Q ss_pred             CCC
Q 021173          314 KTE  316 (316)
Q Consensus       314 NI~  316 (316)
                      ||+
T Consensus       160 Nil  162 (296)
T cd05051         160 NCL  162 (296)
T ss_pred             cee
Confidence            984

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=2e-20  Score=169.62  Aligned_cols=137  Identities=18%  Similarity=0.273  Sum_probs=110.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCce---------eEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAST---------SKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLG  243 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~---------~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g  243 (316)
                      ++|...+.||+|+||.||+|...+....         .....+++|.+..  .......|.+|++++++++|+||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            4677889999999999999987543210         0112378888764  2344567999999999999999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHhcCCC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSD---------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIK  314 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~---------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~N  314 (316)
                      ++...  +..++||||+.+++|.+++.....         ...+++..++.++.|++.||.|||+.   +|+||||||+|
T Consensus        85 ~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N  159 (295)
T cd05097          85 VCVSD--DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN  159 (295)
T ss_pred             EEcCC--CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence            99874  789999999999999999865321         12478999999999999999999995   69999999999


Q ss_pred             CC
Q 021173          315 TE  316 (316)
Q Consensus       315 I~  316 (316)
                      |+
T Consensus       160 il  161 (295)
T cd05097         160 CL  161 (295)
T ss_pred             EE
Confidence            84

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.84  E-value=2.8e-20  Score=165.43  Aligned_cols=124  Identities=13%  Similarity=0.286  Sum_probs=102.8

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      .||+|+||.||+|.+.....   ...+++|.+...  ....+.|.+|+.++++++|+||+++++++..   +..++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~---~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKK---QIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCC---ceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEEEEEe
Confidence            38999999999998753221   023777877633  2335679999999999999999999998864   678999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|+|.+++....  ..+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        76 ~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil  127 (257)
T cd05115          76 ASGGPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVL  127 (257)
T ss_pred             CCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEE
Confidence            99999999997643  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.84  E-value=2.5e-20  Score=168.60  Aligned_cols=136  Identities=19%  Similarity=0.335  Sum_probs=110.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      +|...+.||+|+||.||+|.+.+.........+++|.+.... ...+.|.+|++++++++|+||+++++++...  +..+
T Consensus         6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~   83 (291)
T cd05094           6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG--DPLI   83 (291)
T ss_pred             HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC--CceE
Confidence            466679999999999999986543221122347788876433 3446799999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++++|.+++....             ....+++..++.++.||+.||.|||++   +|+||||||+||+
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil  155 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCL  155 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEE
Confidence            9999999999999997532             123489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.84  E-value=4.4e-20  Score=164.82  Aligned_cols=133  Identities=16%  Similarity=0.263  Sum_probs=107.2

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC----C
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----S  250 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~  250 (316)
                      ..++.||+|+||.||+|.+..++..   ..+++|.+..   .....+.|.+|+.+++.++|+||+++++++....    .
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~---~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   78 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSI---LKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY   78 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCe---eeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence            4568899999999999998766531   2367777653   3445677999999999999999999999875421    2


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++||||+.+|+|.+++....   ....+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil  144 (272)
T cd05075          79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCM  144 (272)
T ss_pred             CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheE
Confidence            35789999999999999875321   123589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.84  E-value=5.3e-21  Score=180.63  Aligned_cols=131  Identities=15%  Similarity=0.274  Sum_probs=113.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ....++||+|-||.||+|.+.+... .+++.||||.-+.  .....+.|+.|..+|++++|||||+|+|+|.+   ...|
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~k-ge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e---~P~W  466 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEK-GERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE---QPMW  466 (974)
T ss_pred             ccHHHhhcCCcccceeeeEeccccc-CcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec---ccee
Confidence            3445899999999999999866531 2345688887763  45667889999999999999999999999997   7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||.++.|.|..+|+.+.  ..++..+...+++||+.||.|||+   .++|||||-..||+
T Consensus       467 ivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiL  523 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNIL  523 (974)
T ss_pred             EEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhhee
Confidence            9999999999999999874  369999999999999999999999   58999999999985

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.84  E-value=3.7e-20  Score=164.11  Aligned_cols=129  Identities=15%  Similarity=0.261  Sum_probs=108.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||++...+..       +++|.+... ...+.|.+|+.+++.++|+||+++++++..+ .+..+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~-------~~~k~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~~~   76 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNK-------VAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLY   76 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCc-------EEEEEeCCC-chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-CCceE
Confidence            35777799999999999999877543       677776533 2346789999999999999999999987654 36789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++.... ...+++..++.++.|++.||.|||++   +|+||||||+||.
T Consensus        77 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil  134 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVL  134 (256)
T ss_pred             EEEECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEE
Confidence            9999999999999998654 33589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.84  E-value=2.5e-20  Score=174.78  Aligned_cols=129  Identities=15%  Similarity=0.216  Sum_probs=107.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC---
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---  249 (316)
                      +|+..+.||+|+||.||++.+..++.     .+++|.+..   .....+.+.+|+.+|+.++|+||+++++++...+   
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   75 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGK-----RVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDP   75 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCC-----EEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccc
Confidence            47778999999999999999876554     378887753   2234567889999999999999999999987642   


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....|+||||+. ++|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        76 ~~~~~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil  135 (372)
T cd07853          76 FEEIYVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLL  135 (372)
T ss_pred             cceEEEEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEE
Confidence            127899999996 58888886543   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.84  E-value=1.1e-20  Score=180.01  Aligned_cols=129  Identities=15%  Similarity=0.166  Sum_probs=115.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-C-----CCcceeeeEEEcCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-H-----PNLCKLLGFHARDG  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-H-----pnIv~l~g~~~~~~  249 (316)
                      .|.+.++||+|+||.|.+|++..+++     .||||+++....-..+-..|+.+|..|+ |     -|+|++++||..  
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e-----~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f--  259 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGE-----IVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF--  259 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCc-----EEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--
Confidence            67888999999999999999999886     4999999988777888889999999996 3     389999999988  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|||+|.+.. +|+++|+.+. -..|+...+..|+.||+.||.+||.   .+|||+|||||||+
T Consensus       260 r~HlciVfELL~~-NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENIL  321 (586)
T KOG0667|consen  260 RNHLCIVFELLST-NLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENIL  321 (586)
T ss_pred             ccceeeeehhhhh-hHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhhee
Confidence            5999999998865 9999999865 3459999999999999999999998   47999999999995

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.84  E-value=3.2e-20  Score=165.92  Aligned_cols=127  Identities=20%  Similarity=0.223  Sum_probs=102.3

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      .||+|+||.||++.+.++...   ..+++|.+..  .....+.|.+|+.+++.++|+||++++++|.+.  ...+|||||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~lv~e~   76 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGV---ARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA--IPYLLVFEY   76 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCc---ceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCC--CccEEEEec
Confidence            589999999999986544331   1134555442  234456899999999999999999999999874  789999999


Q ss_pred             CCCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~-~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|+|.+++..... ...+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil  131 (268)
T cd05086          77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCF  131 (268)
T ss_pred             CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEE
Confidence            999999999986421 23467778889999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.84  E-value=2.2e-20  Score=187.50  Aligned_cols=129  Identities=19%  Similarity=0.174  Sum_probs=111.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+...+.     .|++|.+...    ......+..|+.++..++|+||+++++++...  
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~-----~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--   76 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSK-----LYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSA--   76 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCc-----EEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEEC--
Confidence            568888999999999999999986554     3788877532    23346788999999999999999999888774  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+.+|+|.++|....   .+++..++.|+.||+.||+|||.+   +||||||||+||+
T Consensus        77 ~~~~lVmEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NIL  136 (669)
T cd05610          77 NNVYLVMEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNML  136 (669)
T ss_pred             CEEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEE
Confidence            88999999999999999997643   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.84  E-value=3.6e-20  Score=163.67  Aligned_cols=130  Identities=15%  Similarity=0.228  Sum_probs=111.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++.+.  +.
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   73 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKR-----VYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK--GK   73 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCc-----EEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC--CE
Confidence            46677899999999999999976654     267776642   344567799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++.... ...+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nil  133 (256)
T cd08529          74 LNIVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLF  133 (256)
T ss_pred             EEEEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence            999999999999999998753 33689999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.84  E-value=2.6e-20  Score=171.06  Aligned_cols=123  Identities=17%  Similarity=0.130  Sum_probs=101.1

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHH-HHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ++||+|+||.||+|++..++.     .+++|.+...    ......+..|.. +++.++|+||+++++++.+.  +..||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~--~~~~l   73 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGS-----FYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA--EKLYF   73 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC--CEEEE
Confidence            469999999999999977664     3777776531    222344556654 67889999999999988774  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+++|+|..++....   .+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        74 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIl  128 (321)
T cd05603          74 VLDYVNGGELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENIL  128 (321)
T ss_pred             EEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeE
Confidence            999999999998887643   488899999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.8e-20  Score=168.25  Aligned_cols=130  Identities=16%  Similarity=0.205  Sum_probs=111.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||.|+||.||++.+..++.     .+++|.+.. .....+.|.+|+.++++++|+||+++++++...  +..
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   77 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGL-----FAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE--NKL   77 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCc-----EEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC--CeE
Confidence            457777899999999999999876554     377777653 344556799999999999999999999999874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|.+++....  ..+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nil  135 (280)
T cd06611          78 WILIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNIL  135 (280)
T ss_pred             EEEeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEE
Confidence            99999999999999987643  2599999999999999999999995   6999999999973

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.83  E-value=3.7e-20  Score=164.87  Aligned_cols=132  Identities=20%  Similarity=0.249  Sum_probs=110.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..    .......|.+|+++++.++|+||+++++++.+.  
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--   74 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRK-----PVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED--   74 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCC-----EEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC--
Confidence            568888999999999999999876554     367776542    234456789999999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||++   +|+|+||||+||+
T Consensus        75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil  138 (267)
T cd08228          75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVF  138 (267)
T ss_pred             CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEE
Confidence            78999999999999999886422 133588999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.83  E-value=3.3e-20  Score=168.98  Aligned_cols=133  Identities=19%  Similarity=0.317  Sum_probs=109.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++..+ ...+++|.+...  ......+.+|+.+++.++|+||++++|+|..   ..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---~~   82 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETV-KIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS---PT   82 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcc-eeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC---CC
Confidence            35666789999999999999986655432 234788877643  2334468999999999999999999999875   45


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++++||+++|+|.+++....  ..+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nil  141 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVL  141 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---Ceeccccccceee
Confidence            789999999999999998653  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.83  E-value=3.3e-20  Score=165.69  Aligned_cols=132  Identities=15%  Similarity=0.287  Sum_probs=109.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+.+...  ....+++|.....  ....+.|.+|+.+++.++|+||+++++++.+   +.
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---~~   80 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPEN--EKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE---NP   80 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCC--CCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC---CC
Confidence            346777999999999999999765411  0123677776532  3455679999999999999999999999876   56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +++|+||||+||+
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nil  139 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVL  139 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEE
Confidence            789999999999999997643  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.83  E-value=4.3e-20  Score=165.64  Aligned_cols=135  Identities=19%  Similarity=0.238  Sum_probs=111.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||++.+....... ...+++|.+.....  ....|.+|+.+++.+.|+||+++++++...+....
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~-~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNT-GEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCC-ceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            4556689999999999999975431100 12388888875443  46789999999999999999999999887555789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil  141 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNIL  141 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEE
Confidence            99999999999999998753  2499999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.83  E-value=3.5e-20  Score=170.46  Aligned_cols=123  Identities=18%  Similarity=0.155  Sum_probs=101.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHH-HHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+..++.     .+++|.+...    ......+..|.. +++.++|+||+++++++...  +..+|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~--~~~~l   73 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGK-----FYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA--DKLYF   73 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC--CEEEE
Confidence            469999999999999976664     3788877532    222344555655 56789999999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|..++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        74 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIl  128 (323)
T cd05575          74 VLDYVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENIL  128 (323)
T ss_pred             EEcCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeE
Confidence            999999999999997643   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.83  E-value=2.1e-20  Score=167.63  Aligned_cols=137  Identities=18%  Similarity=0.312  Sum_probs=111.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+.+.........+++|.+....  ...+.|.+|+++|..++|+||+++++++...  +.
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   82 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEG--DP   82 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecC--CC
Confidence            3466678999999999999987554211111237888876432  2457899999999999999999999999884  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSD-----------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~-----------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.++|.....           ...+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nil  154 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCL  154 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEE
Confidence            9999999999999999976421           23478999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.83  E-value=2.5e-20  Score=168.40  Aligned_cols=144  Identities=26%  Similarity=0.301  Sum_probs=119.5

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeee
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG  243 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g  243 (316)
                      ++++++...+++|...+.||+|+||.||++....++.     .+++|.+.........+.+|+.++.++ +|+||+++++
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~-----~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~   86 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGS-----LAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYG   86 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCC-----EEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence            5566777788999999999999999999999876654     377777764444456788999999999 7999999999


Q ss_pred             EEEcCC---CCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDG---SDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~---~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++...+   .+..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        87 ~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nil  160 (291)
T cd06639          87 MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNIL  160 (291)
T ss_pred             EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEE
Confidence            987532   246899999999999999886421 133589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.83  E-value=3.7e-20  Score=170.46  Aligned_cols=123  Identities=16%  Similarity=0.132  Sum_probs=100.3

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHH-HHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+..++.     .+++|.+...    ......+..|.. +++.++|+||+++++++...  +.+|+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~--~~~~l   73 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEK-----FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA--DKLYF   73 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCC-----EEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC--CeEEE
Confidence            469999999999999987664     2777776532    122234445544 56788999999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++....   .+.+..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        74 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nil  128 (325)
T cd05602          74 VLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENIL  128 (325)
T ss_pred             EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeE
Confidence            999999999999997643   488888999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.83  E-value=2.9e-20  Score=166.44  Aligned_cols=137  Identities=14%  Similarity=0.245  Sum_probs=111.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+.+.........+++|.+...  ......|.+|+.++..++|+||+++++++...  +.
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~   83 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG--QP   83 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--CC
Confidence            467778999999999999999865431111234888887633  23455789999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSD-------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~-------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++.....       ...++|..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nil  151 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCM  151 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEE
Confidence            9999999999999999975321       12478999999999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.83  E-value=4.9e-20  Score=164.33  Aligned_cols=135  Identities=18%  Similarity=0.313  Sum_probs=107.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC---
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~---  250 (316)
                      |...+.||+|+||.||+|.+..+...  ...+++|.+...   ......+.+|+.+++.++|+||+++++++.....   
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   78 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGS--QLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQK   78 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCC--cceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcccc
Confidence            45668999999999999998643311  013778877632   3345679999999999999999999998876321   


Q ss_pred             -CeEEEEEecCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 -DQRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 -~~~~lV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ...++||||+++|+|..++....   ....+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil  145 (273)
T cd05035          79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCM  145 (273)
T ss_pred             CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEE
Confidence             24799999999999999986532   123589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.83  E-value=4.7e-20  Score=167.21  Aligned_cols=137  Identities=15%  Similarity=0.234  Sum_probs=110.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCce-----------eEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCccee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAST-----------SKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~-----------~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      ++|...+.||+|+||.||++.+.+....           .....+++|.+..  .......|.+|+.+++.++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~   84 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL   84 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4577889999999999999875442210           0112478888763  23345679999999999999999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCC
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMI  313 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~--------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~  313 (316)
                      ++++...  +..++||||+.+|+|.+++.....        ...+++.++..++.|++.||+|||+.   +|+||||||+
T Consensus        85 ~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~  159 (296)
T cd05095          85 LAVCITS--DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR  159 (296)
T ss_pred             EEEEecC--CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence            9999874  789999999999999999976421        12478889999999999999999995   6999999999


Q ss_pred             CCC
Q 021173          314 KTE  316 (316)
Q Consensus       314 NI~  316 (316)
                      ||+
T Consensus       160 Nil  162 (296)
T cd05095         160 NCL  162 (296)
T ss_pred             eEE
Confidence            984

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.83  E-value=3.2e-20  Score=169.30  Aligned_cols=137  Identities=17%  Similarity=0.258  Sum_probs=111.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCce--eEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAST--SKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~--~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||++.+.+....  .....+++|.+...  ......+..|+.++..+ +|+||+++++++... 
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~-   96 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-   96 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-
Confidence            5688889999999999999987442211  11123788887642  34456788999999999 799999999999875 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..|+||||+.+|+|.++|.....             ...+++.+++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        97 -~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil  172 (307)
T cd05098          97 -GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL  172 (307)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheE
Confidence             789999999999999999986421             13589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.83  E-value=5.3e-20  Score=164.07  Aligned_cols=133  Identities=15%  Similarity=0.282  Sum_probs=110.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++..  ...+++|.+...  ....+.|.+|+++++.++|+||+++++++...  +.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~--~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   80 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRK--EVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF--KP   80 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCC--ceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC--CC
Confidence            4677779999999999999998654321  113777777632  33456799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+++|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil  139 (268)
T cd05063          81 AMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNIL  139 (268)
T ss_pred             cEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEE
Confidence            999999999999999997643  2589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.83  E-value=7.8e-20  Score=163.05  Aligned_cols=131  Identities=15%  Similarity=0.200  Sum_probs=110.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC------chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS------SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      .+|...+.||+|+||.||++....++.     .+++|.+...      ......+.+|+.+++.++|+||+++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   76 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGR-----ELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR   76 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCc-----EEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence            468888999999999999999876654     2667765421      23345688999999999999999999998764


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+.++++|||+++++|.+++....   .+++...+.++.|++.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil  138 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANIL  138 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEE
Confidence            4467899999999999999997643   489999999999999999999984   6999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.83  E-value=7e-20  Score=161.52  Aligned_cols=123  Identities=18%  Similarity=0.316  Sum_probs=104.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ++||+|+||.||+|...++..      +++|.+...  ......|.+|+++++.++|+||+++++++...  +..++|||
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~------~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e   72 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTP------VAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQR--QPIYIVME   72 (250)
T ss_pred             CccCCCCCceEEEEEecCCcE------EEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC--CccEEEEE
Confidence            368999999999999766543      778877632  23345689999999999999999999999874  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +++||||||+||.
T Consensus        73 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nil  125 (250)
T cd05085          73 LVPGGDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCL  125 (250)
T ss_pred             CCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEE
Confidence            999999999987643  2489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.83  E-value=5.7e-20  Score=165.20  Aligned_cols=130  Identities=19%  Similarity=0.249  Sum_probs=109.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||+|....++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++.++  +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   73 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQ-----IVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE--SR   73 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCc-----EEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC--Ce
Confidence            46777899999999999999876654     3777776532   22345688999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+. ++|.+++.....+..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil  133 (285)
T cd07861          74 LYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLL  133 (285)
T ss_pred             EEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEE
Confidence            999999997 68998887644334689999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.83  E-value=6e-20  Score=165.23  Aligned_cols=137  Identities=17%  Similarity=0.286  Sum_probs=109.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .+|...+.||+|+||.||++...+.........+++|.+.. .......|.+|+++++.++|+||+++++++...  +..
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   82 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEG--RPL   82 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--Cce
Confidence            34666799999999999999764321111112377777663 334456799999999999999999999998874  779


Q ss_pred             EEEEecCCCCCHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSD------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|.+++.....            ...+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil  154 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCL  154 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEE
Confidence            999999999999999976421            12488999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=5.9e-20  Score=163.06  Aligned_cols=129  Identities=16%  Similarity=0.216  Sum_probs=110.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC------chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS------SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ++|...+.||+|+||.||.+....++.     .+++|.+...      ......+.+|++++++++|+||+++++++.++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~-----~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGR-----ELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCc-----EEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC
Confidence            578888999999999999999876554     3667765421      12345688999999999999999999999875


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +..++||||+++++|.+++....   .+++..+..++.|++.||.|||+.   +|+||||+|+||.
T Consensus        77 --~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil  136 (263)
T cd06625          77 --ETLSIFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANIL  136 (263)
T ss_pred             --CeEEEEEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence              79999999999999999998653   488999999999999999999995   6999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.83  E-value=4.7e-20  Score=165.62  Aligned_cols=138  Identities=19%  Similarity=0.249  Sum_probs=112.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+...... ....+++|.+..  .......+.+|+.++++++|+||+++++++... ..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~-~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~-~~   82 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPG-KEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIED-GE   82 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCC-ceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC-CC
Confidence            45677889999999999999998762200 012377777653  334456789999999999999999999998764 47


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDG-----PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~-----~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++++||+.+|+|.++|......     ..+++.+++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil  149 (280)
T cd05043          83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCV  149 (280)
T ss_pred             CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEE
Confidence            789999999999999999764321     4689999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.83  E-value=8.1e-20  Score=163.40  Aligned_cols=128  Identities=22%  Similarity=0.339  Sum_probs=105.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.||+|+||.||+|.+.+++..   ..+++|.+..  .....+.|.+|++++.++ +|+||+++++++...  +..++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~---~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~--~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--GYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCe---eEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC--CCceEEE
Confidence            3689999999999998765431   2356776653  234456789999999999 799999999999874  7789999


Q ss_pred             ecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+.+|+|.+++....             ....+++.+++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil  144 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL  144 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEE
Confidence            9999999999997532             112478999999999999999999994   6999999999984

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.83  E-value=2.6e-20  Score=165.96  Aligned_cols=129  Identities=16%  Similarity=0.179  Sum_probs=109.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+... ......+.+|+.+++.++|+||+++++++...  +..
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~--~~~   81 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGE-----LAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR--DKL   81 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCc-----EEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC--CEE
Confidence            356666899999999999999876654     2777776532 23345688999999999999999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++++|.+++....   .+++.+++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil  138 (267)
T cd06645          82 WICMEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANIL  138 (267)
T ss_pred             EEEEeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            99999999999999987654   589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.83  E-value=7.2e-20  Score=165.23  Aligned_cols=131  Identities=18%  Similarity=0.242  Sum_probs=102.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCC-CceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhC---CCCCcceeeeEEEcC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDD-ASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASL---QHPNLCKLLGFHARD  248 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~-~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~~  248 (316)
                      +|...+.||+|+||.||+|.+... +.     .+++|.+...   ......+.+|+.+++.+   +|+||++++++|...
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~   76 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGR-----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS   76 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCe-----EEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecc
Confidence            577889999999999999998533 32     2677766521   22234567788877766   699999999998631


Q ss_pred             ---CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 ---GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ---~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ....+++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil  142 (290)
T cd07862          77 RTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNIL  142 (290)
T ss_pred             cCCCCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEE
Confidence               2356899999996 59999997643 23589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.83  E-value=3.9e-20  Score=164.69  Aligned_cols=128  Identities=20%  Similarity=0.288  Sum_probs=109.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      +|...+.||+|+||.||++....++.     .+++|.+....       ...+.+.+|+.+++.++|+||+++++++.+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGT-----LMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCc-----EEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC
Confidence            47778999999999999999866554     26777665221       2356789999999999999999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +..++||||+.+++|.+++....   .+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        76 --~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil  135 (268)
T cd06630          76 --SHFNLFVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLL  135 (268)
T ss_pred             --CeEEEEEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence              88999999999999999997643   589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.83  E-value=3.1e-20  Score=175.65  Aligned_cols=132  Identities=13%  Similarity=0.153  Sum_probs=114.6

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ..+..|.+...||+|.|+.|.+++...++.     +||+|.++++   ....+.+.+|+++|..|.|||||+|+.+...+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~-----~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~  127 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGT-----EVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE  127 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCc-----eEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec
Confidence            345678888999999999999999877664     4999998753   33345588999999999999999999999884


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ..+|+||||+.+|.++++|....   .+.+..+..++.|+..|++|||++   .|||||||.+||+
T Consensus       128 --~~lylV~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNil  187 (596)
T KOG0586|consen  128 --ATLYLVMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENIL  187 (596)
T ss_pred             --ceeEEEEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcc
Confidence              89999999999999999999865   355688888999999999999994   7999999999985

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.83  E-value=7.6e-20  Score=162.82  Aligned_cols=127  Identities=17%  Similarity=0.247  Sum_probs=107.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-------chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-------SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      +|...+.||.|+||.||+|...++..      +++|.+...       ......+.+|+++++.++|+||+++++++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~------~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQL------IAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCe------EEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence            46777999999999999998765543      667766421       12235688999999999999999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +..++||||+++++|.+++....   .+++..+..++.|++.||+|||+.   +|+|+||+|+||+
T Consensus        75 --~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil  134 (265)
T cd06631          75 --NTISIFMEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVM  134 (265)
T ss_pred             --CeEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEE
Confidence              88999999999999999997653   488999999999999999999995   6999999999984

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.83  E-value=9.9e-20  Score=161.14  Aligned_cols=130  Identities=17%  Similarity=0.188  Sum_probs=110.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+.  ......+.+.+|+.+++.++|+||+++++++.+.  +.+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   73 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQ-----KYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD--GHL   73 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCc-----eEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC--CEE
Confidence            46677999999999999999876654     26777654  2334456788999999999999999999998874  899


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++.... +..+++..++.++.|++.||.|||+.   +|+|+||||+||+
T Consensus        74 ~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nil  132 (255)
T cd08219          74 YIVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIF  132 (255)
T ss_pred             EEEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEE
Confidence            99999999999999987543 33589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=7.2e-20  Score=162.33  Aligned_cols=125  Identities=20%  Similarity=0.320  Sum_probs=105.1

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ++||+|+||.||+|.+......  ...+++|.+.....  ..+++.+|+.+++.+.|+||+++++++..   +..++|||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~--~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGK--EVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPLMLVME   75 (257)
T ss_pred             CccCccCceeEEEeEeeccCCC--cceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---CceEEEEE
Confidence            4699999999999987554310  01378888774333  55679999999999999999999998764   67899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+|+|.++|....   .+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        76 ~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nil  127 (257)
T cd05060          76 LAPLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVL  127 (257)
T ss_pred             eCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEE
Confidence            999999999998754   589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.83  E-value=4.1e-20  Score=163.62  Aligned_cols=127  Identities=16%  Similarity=0.305  Sum_probs=107.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||++...+..       +++|.+.... ....|.+|+.+++.++|+||+++++++..   +..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~-------~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---~~~~   74 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQK-------VAVKNIKCDV-TAQAFLEETAVMTKLHHKNLVRLLGVILH---NGLY   74 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCc-------eEEEeecCcc-hHHHHHHHHHHHHhCCCCCcCeEEEEEcC---CCcE
Confidence            35777899999999999999765443       6777765332 34678999999999999999999999876   5579


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++.... ...+++..++.++.|++.||.|||+.   +++||||||+||+
T Consensus        75 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nil  132 (254)
T cd05083          75 IVMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNIL  132 (254)
T ss_pred             EEEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEE
Confidence            9999999999999998654 33589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.7e-20  Score=167.71  Aligned_cols=133  Identities=16%  Similarity=0.215  Sum_probs=112.9

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC---CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEc-
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR-  247 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-  247 (316)
                      .....|...+.||+|+||.|+.+.+..++.     .||+|++.   ......++..+|+.+|+.++|+||+.+++.+.. 
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~-----~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~   93 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGE-----KVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP   93 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCC-----EeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc
Confidence            344556556889999999999999988775     48999887   244556788999999999999999999998865 


Q ss_pred             --CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 --DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 --~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.-+.+|+|+|+|+ .+|...|+...   .++......+++|+++||.|+|+.   +|+||||||+||+
T Consensus        94 ~~~~f~DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll  157 (359)
T KOG0660|consen   94 SRDKFNDVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLL  157 (359)
T ss_pred             cccccceeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhhee
Confidence              22477999999994 59999998764   489999999999999999999995   7999999999985

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.83  E-value=8.1e-20  Score=164.34  Aligned_cols=128  Identities=18%  Similarity=0.284  Sum_probs=108.9

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+.. .....+.|.+|+++++.++|+||+++++++...  +..++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~~   79 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGV-----LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNLWI   79 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCe-----EEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC--CEEEE
Confidence            3445789999999999999987664     267777653 344567799999999999999999999999874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|..++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        80 v~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nil  135 (282)
T cd06643          80 LIEFCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNIL  135 (282)
T ss_pred             EEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEE
Confidence            999999999998887532  2589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.83  E-value=5.7e-20  Score=166.19  Aligned_cols=129  Identities=16%  Similarity=0.170  Sum_probs=110.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+...    ......+.+|++++++++|+||+++++++.+.  
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--   73 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGK-----YYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD--   73 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC--
Confidence            367788999999999999999976554     3777776532    23456688999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +|+|+||+|+||+
T Consensus        74 ~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nil  133 (290)
T cd05580          74 SNLYLVMEYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLL  133 (290)
T ss_pred             CeEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEE
Confidence            88999999999999999998753   589999999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.83  E-value=8.9e-20  Score=161.96  Aligned_cols=128  Identities=20%  Similarity=0.355  Sum_probs=104.5

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      +.||+|+||.||+|.+.+....  ...+++|.+..  .....+.|.+|+.+++.++|+||+++++++... .+..++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~lv~e   77 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQ--KIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSPLVVLP   77 (262)
T ss_pred             CcccccCCceEEEEEEecCCCc--eEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCcEEEEe
Confidence            4689999999999997543221  13478888753  334567889999999999999999999988653 256889999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        78 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nil  130 (262)
T cd05058          78 YMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCM  130 (262)
T ss_pred             cCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEE
Confidence            999999999998643  2467888899999999999999994   7999999999984

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.83  E-value=6.2e-20  Score=167.04  Aligned_cols=138  Identities=15%  Similarity=0.240  Sum_probs=110.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCC--ceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDA--STSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~--~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|+||.||++.+....  .......+++|.+...  ......+.+|+.+++.+ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            455777799999999999999853211  1111124788877632  34456799999999999 799999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                        +..++||||+.+|+|.++|.....             ...+++..++.++.||+.||.|||++   +|+||||||+||
T Consensus        94 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni  168 (304)
T cd05101          94 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV  168 (304)
T ss_pred             --CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence              789999999999999999986421             13478899999999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      +
T Consensus       169 l  169 (304)
T cd05101         169 L  169 (304)
T ss_pred             E
Confidence            4

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.83  E-value=3e-20  Score=164.40  Aligned_cols=127  Identities=20%  Similarity=0.305  Sum_probs=108.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhH---hHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVK---EFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~---~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|+||+||++....++.     .+++|.+........   ...+|+.++..++|+||+++++++...  +..
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~   73 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQ-----KVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDD--NYL   73 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTE-----EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEES--SEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCe-----EEEEEEeccccccccccchhhhhhhcccccccccccccccccccc--ccc
Confidence            4456899999999999999988875     388888875443322   345699999999999999999999884  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+++|.++|....   .+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~v~~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl  130 (260)
T PF00069_consen   74 YIVMEYCPGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENIL  130 (260)
T ss_dssp             EEEEEEETTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEE
T ss_pred             cccccccccccccccccccc---cccccccccccccccccccccccc---ccccccccccccc
Confidence            99999999999999998322   489999999999999999999995   7999999999984

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.83  E-value=9.1e-20  Score=164.92  Aligned_cols=130  Identities=17%  Similarity=0.236  Sum_probs=111.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +.|...+.||.|+||.||+|.+..++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++..+  +..
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   84 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGA-----LAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWD--GKL   84 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCc-----eEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC--CeE
Confidence            457777999999999999999987654     377777753 344567799999999999999999999998874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+++|..++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        85 ~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil  142 (292)
T cd06644          85 WIMIEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVL  142 (292)
T ss_pred             EEEEecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEE
Confidence            99999999999988876542  2489999999999999999999995   6999999999984

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.83  E-value=4.8e-20  Score=165.76  Aligned_cols=135  Identities=19%  Similarity=0.238  Sum_probs=108.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||+|.+.++........+++|.+....  .....|.+|+.++..++|+||+++++++...  +..+
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--~~~~   84 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--QPLS   84 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--CceE
Confidence            44558899999999999998654221122348888887432  2346688999999999999999999999874  7799


Q ss_pred             EEEecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++||+.+++|.+++....             ....+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil  156 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL  156 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence            9999999999999986321             012488999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.83  E-value=4.7e-20  Score=176.81  Aligned_cols=131  Identities=10%  Similarity=0.104  Sum_probs=104.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC----
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----  249 (316)
                      ..+|...+.||+|+||.||+|.+..++.     .+|+|.+....   ....+|+.+|+.++|+|||++++++....    
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~-----~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSE-----KVAIKKVLQDP---QYKNRELLIMKNLNHINIIFLKDYYYTECFKKN  136 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCC-----EEEEEEEecCc---chHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence            4578889999999999999999876654     37888775322   23457999999999999999998875421    


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ...+++||||+.+ +|.+++... .....+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NIL  202 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLL  202 (440)
T ss_pred             CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEE
Confidence              1347799999975 787776532 1234699999999999999999999995   6999999999984

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.82  E-value=8.8e-20  Score=161.45  Aligned_cols=128  Identities=16%  Similarity=0.316  Sum_probs=109.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +|...+.||+|+||.||++.+..+..      +++|.+.........|.+|+++++.++|+||+++++++...  ...++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~------~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~   76 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRK------VAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTER--SPICL   76 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCe------EEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccC--CceEE
Confidence            46667899999999999998875443      77887765444456799999999999999999999998774  78899


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++....  ..+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        77 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~  132 (256)
T cd05112          77 VFEFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCL  132 (256)
T ss_pred             EEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEE
Confidence            999999999999997643  2489999999999999999999995   6999999999983

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.82  E-value=7.1e-20  Score=167.57  Aligned_cols=129  Identities=14%  Similarity=0.180  Sum_probs=102.5

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      ++.||+|+||.||+|...++...   ..+++|.+.... ....+.+|+.+|+.++|+||+++++++.......+++||||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~---~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~   81 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDD---RDYALKQIEGTG-ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDY   81 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCC---ceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEec
Confidence            36899999999999997643210   137888776432 23457899999999999999999999876545678999999


Q ss_pred             CCCCCHHHHHhcCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRS------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+ +|.+++....      ....+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil  140 (317)
T cd07868          82 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANIL  140 (317)
T ss_pred             cCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEE
Confidence            864 8888876321      122489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=5.7e-20  Score=169.46  Aligned_cols=121  Identities=15%  Similarity=0.121  Sum_probs=100.4

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC---CCCCcceeeeEEEcCCCCeEEE
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL---QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ||+|+||.||+|.+..++.     .+++|.+...    ......+..|..++..+   .|+||+.+++++.+.  +..||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~--~~~~l   73 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRR-----IYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD--SDLYL   73 (330)
T ss_pred             CCCCCceEEEEEEECCCCC-----EEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC--CeEEE
Confidence            6999999999999877654     3788877531    22334456677777665   699999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++....   .+++..+..|+.||+.||.|||++   +|+||||||+||+
T Consensus        74 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nil  128 (330)
T cd05586          74 VTDYMSGGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENIL  128 (330)
T ss_pred             EEcCCCCChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeE
Confidence            999999999999987643   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.82  E-value=4.6e-22  Score=169.38  Aligned_cols=130  Identities=16%  Similarity=0.194  Sum_probs=110.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++.|+.-+.||+|.|+.||++....++.     .+++|.++.   ...+.+++.+|+.|.+.|+|||||+|...+.++  
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~-----~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~--   82 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGL-----EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE--   82 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchH-----HHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhccc--
Confidence            3456666899999999999999877765     266666652   334678899999999999999999999988775  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...|||+|+|.||+|..-|-.+.   .+++..+-.++.||+.+|.|+|.+   +|||||+||+|++
T Consensus        83 ~~~ylvFe~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nll  142 (355)
T KOG0033|consen   83 SFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLL  142 (355)
T ss_pred             ceeEEEEecccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhhee
Confidence            88999999999999977776653   588999999999999999999996   6999999999974

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.82  E-value=1.1e-19  Score=161.46  Aligned_cols=132  Identities=20%  Similarity=0.261  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..    .....+.+.+|++++++++|+||+++++++.+.  
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~--   74 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGR-----VVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN--   74 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCC-----EEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC--
Confidence            578888999999999999999985554     267776642    223356799999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++|+|..++.... ....+++..++.++.+++.||.|||+.   +|+||||||+||.
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil  138 (267)
T cd08224          75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVF  138 (267)
T ss_pred             CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEE
Confidence            78999999999999999987532 234589999999999999999999995   6999999999983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.82  E-value=7.6e-20  Score=165.00  Aligned_cols=138  Identities=22%  Similarity=0.288  Sum_probs=110.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||++.+.+.........+++|.+...  ......|.+|+.+++.++|+||+++++++...  +
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~--~   81 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVG--K   81 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--C
Confidence            4568888999999999999998753100000123788877632  33456799999999999999999999998874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS-------------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEM  312 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~-------------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp  312 (316)
                      ..++||||+.+|+|.+++....                   ....+++..++.++.|++.||.|||+.   +|+||||||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p  158 (288)
T cd05050          82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT  158 (288)
T ss_pred             ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence            8899999999999999997431                   112478899999999999999999995   699999999


Q ss_pred             CCCC
Q 021173          313 IKTE  316 (316)
Q Consensus       313 ~NI~  316 (316)
                      +||.
T Consensus       159 ~nil  162 (288)
T cd05050         159 RNCL  162 (288)
T ss_pred             hheE
Confidence            9984

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.82  E-value=6.9e-20  Score=164.69  Aligned_cols=143  Identities=18%  Similarity=0.219  Sum_probs=118.3

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeee
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG  243 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g  243 (316)
                      .++.++....+.|...+.||+|+||.||+|.+...+.     .+++|.+.........+..|+.++.++ +|+||+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~   80 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQ-----LAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYG   80 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCc-----EEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEee
Confidence            3555666667788888999999999999999976654     377787765555556788999999999 6999999999


Q ss_pred             EEEcC----CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARD----GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~----~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++...    ..+..+++|||+.+|+|.+++.... ...+++..++.++.||+.||.|||+.   +|+|+||||+||.
T Consensus        81 ~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nil  153 (282)
T cd06636          81 AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVL  153 (282)
T ss_pred             ehhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            98642    1367899999999999999997643 33588999999999999999999995   6999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.82  E-value=5.4e-20  Score=192.33  Aligned_cols=133  Identities=23%  Similarity=0.361  Sum_probs=109.5

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeE
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGF  244 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~  244 (316)
                      ++++++.   ..|...++||+|+||.||+|.+..++.     .|++|.+.....   ....|++++++++|||||+++|+
T Consensus       683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~---~~~~~~~~l~~l~HpnIv~~~~~  751 (968)
T PLN00113        683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGM-----QFVVKEINDVNS---IPSSEIADMGKLQHPNIVKLIGL  751 (968)
T ss_pred             hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCc-----EEEEEEccCCcc---ccHHHHHHHhhCCCCCcceEEEE
Confidence            3444443   457777899999999999999865553     388888763322   22356889999999999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.++  +..|+||||+++|+|.++++.      ++|..+..|+.||+.||+|||..+..+|+||||||+||.
T Consensus       752 ~~~~--~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil  815 (968)
T PLN00113        752 CRSE--KGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKII  815 (968)
T ss_pred             EEcC--CCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEE
Confidence            9874  778999999999999999953      899999999999999999999654468999999999984

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.82  E-value=1.2e-19  Score=160.57  Aligned_cols=130  Identities=15%  Similarity=0.218  Sum_probs=110.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|+..+.||+|+||.||.+....++..     +++|.+..   .......+.+|++++++++|+||+++++++.+.  +.
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~-----~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~   73 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSL-----VVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD--NT   73 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcE-----EEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC--Ce
Confidence            467779999999999999998766552     66665542   334456789999999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        74 ~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~  133 (256)
T cd08221          74 LLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIF  133 (256)
T ss_pred             EEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEE
Confidence            999999999999999998753 33589999999999999999999995   6999999999983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.4e-20  Score=174.59  Aligned_cols=129  Identities=15%  Similarity=0.191  Sum_probs=112.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .-|..++.||+|-|++|-+++..-+++     +||||.+.+.+   .....+..|+.+|+.++|||||+||.+....  .
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGe-----kVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ--T   90 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGE-----KVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ--T   90 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccc-----eeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc--c
Confidence            346666889999999999998776665     48999987543   3345688999999999999999999988774  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      .+|||+|.-.+|+|++||-....  .+.+....+++.||..|+.|+|.   .+||||||||+||
T Consensus        91 KlyLiLELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENV  149 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENV  149 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCccee
Confidence            89999999999999999988653  49999999999999999999999   6899999999998

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.82  E-value=5.6e-20  Score=169.79  Aligned_cols=137  Identities=16%  Similarity=0.253  Sum_probs=110.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      .+|...+.||+|+||.||++.+.+...  ......+++|.+..  .....+.+.+|+.++.++ +|+||++++++|..+ 
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-   90 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD-   90 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC-
Confidence            357778999999999999998643221  11223478887763  233456799999999999 799999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+.+|+|.++|....             ....+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        91 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil  166 (334)
T cd05100          91 -GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL  166 (334)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence             78999999999999999997632             123488999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.82  E-value=8.3e-20  Score=164.89  Aligned_cols=134  Identities=17%  Similarity=0.204  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||.|+||.||++.+..++.     .+++|.+...  ......+.+|+++++.++|+||++++++|.++..+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   75 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGM-----IFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSS   75 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCe-----EEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCe
Confidence            357777999999999999999976654     3777776532  234567999999999999999999999997754567


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||||+++++|.+++.... ....+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil  137 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNIL  137 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            999999999999998876421 234589999999999999999999994   6999999999984

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.82  E-value=7.2e-20  Score=166.38  Aligned_cols=129  Identities=15%  Similarity=0.208  Sum_probs=108.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..  .......+.+|+.+++.++|+||+++++++..+  +.
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~--~~   78 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDN-----LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE--KS   78 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCc-----EEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC--Ce
Confidence            457778999999999999999876654     277777652  222344678999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+. ++|.+++....  ..+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        79 ~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil  136 (301)
T cd07873          79 LTLVFEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLL  136 (301)
T ss_pred             EEEEEeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEE
Confidence            999999997 59999887653  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.82  E-value=7.9e-20  Score=166.06  Aligned_cols=128  Identities=21%  Similarity=0.239  Sum_probs=110.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .+|...+.||+|+||.||++....++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++...  +..
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~   91 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQ-----EVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG--DEL   91 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCC-----EEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CEE
Confidence            568888999999999999999865554     277777753 233446688999999999999999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++++|.+++...    .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        92 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nil  147 (297)
T cd06656          92 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNIL  147 (297)
T ss_pred             EEeecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            9999999999999998754    389999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1e-19  Score=166.38  Aligned_cols=131  Identities=17%  Similarity=0.191  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|...+++.     .+++|.+....    ...+.+..|+++++.++|+||+++++++...  
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--   73 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGK-----LFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTE--   73 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCc-----EEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecC--
Confidence            357778999999999999999987554     37778775322    2456789999999999999999999998774  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+++|.+++.... +..+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  135 (316)
T cd05574          74 TYLCLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENIL  135 (316)
T ss_pred             CEEEEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeE
Confidence            78999999999999999987643 34699999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.82  E-value=1.3e-21  Score=170.97  Aligned_cols=125  Identities=14%  Similarity=0.220  Sum_probs=111.7

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ...+||+|+||.||++..+..+.+     +|+|.+. -..+.+++..|+.+|++++.+++|++||.|...  ..+|||||
T Consensus        37 i~~KLGEGSYGSV~KAIH~EsG~v-----~AIK~VP-V~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~--sDLWIVME  108 (502)
T KOG0574|consen   37 IVGKLGEGSYGSVHKAIHRESGHV-----LAIKKVP-VDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH--SDLWIVME  108 (502)
T ss_pred             HHHHhcCCcchHHHHHHHhccCcE-----EEEEecC-ccchHHHHHHHHHHHHHcCCchhhhhhhhhccC--CceEeehh
Confidence            347899999999999999887764     8888876 345678899999999999999999999998874  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||--|++.+.++.++.  .+.+.++..++...+.||+|||.   +.-||||||..||+
T Consensus       109 YCGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNIL  161 (502)
T KOG0574|consen  109 YCGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNIL  161 (502)
T ss_pred             hcCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEE
Confidence            9999999999998753  69999999999999999999999   57899999999995

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.82  E-value=8.3e-20  Score=165.85  Aligned_cols=128  Identities=21%  Similarity=0.242  Sum_probs=109.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .+|...+.||+|+||.||+|.+..++.     .+++|.+.. .....+.+.+|+.+++.+.|+||+++++++...  +..
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~--~~~   92 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQ-----EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG--DEL   92 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCc-----EEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC--CEE
Confidence            467777899999999999999866554     277776653 233456788999999999999999999998874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++...    .+++.+++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        93 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nil  148 (296)
T cd06654          93 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL  148 (296)
T ss_pred             EEeecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            9999999999999998653    489999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.82  E-value=8e-21  Score=179.38  Aligned_cols=137  Identities=16%  Similarity=0.242  Sum_probs=120.4

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ++++....++....+||-|.||.||.|.|+.-..     .||||.++.+....++|+.|..+|+.++|||+|+|+|+|..
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkysl-----TvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~  334 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH  334 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccce-----eeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhcc
Confidence            4555545566677899999999999999987653     49999999888899999999999999999999999999998


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      +  ..+|||+|||.+|+|.+||++.. ...++.-..+.++.||+.||+||..   +++|||||-..|-
T Consensus       335 E--pPFYIiTEfM~yGNLLdYLRecn-r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNC  396 (1157)
T KOG4278|consen  335 E--PPFYIITEFMCYGNLLDYLRECN-RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNC  396 (1157)
T ss_pred             C--CCeEEEEecccCccHHHHHHHhc-hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhc
Confidence            6  78999999999999999999865 3357777888999999999999999   5799999998885

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=3.9e-20  Score=179.80  Aligned_cols=138  Identities=12%  Similarity=0.106  Sum_probs=113.1

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ....++|...+.||+|+||.||++.+..++.     .+|+|.+..   .......+.+|+.++..++|+||++++..+..
T Consensus        28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~-----~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~  102 (496)
T PTZ00283         28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGE-----PFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAK  102 (496)
T ss_pred             cccCCCEEEEEEEecCCCEEEEEEEEcCCCC-----EEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceec
Confidence            4445789999999999999999999876654     388888753   33445678899999999999999999887654


Q ss_pred             CCC------CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGS------DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~------~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.      ..+++||||+.+|+|.++|.... ....+++..+..|+.|++.||.|||+.   +|+||||||+||+
T Consensus       103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NIL  175 (496)
T PTZ00283        103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANIL  175 (496)
T ss_pred             ccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence            211      13689999999999999997642 234689999999999999999999994   7999999999984

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.3e-19  Score=161.54  Aligned_cols=131  Identities=15%  Similarity=0.211  Sum_probs=110.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      .+|...+.||+|+||.||+|.+..++.     .+++|.+..      .......|.+|++++++++|+||+++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGR-----ELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCC-----EEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC
Confidence            468888999999999999999876554     266666531      223456789999999999999999999998765


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+.+++||||+++++|.+++....   .+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~  138 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANIL  138 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence            4467899999999999999997643   488999999999999999999995   6999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.82  E-value=1.1e-19  Score=165.57  Aligned_cols=129  Identities=11%  Similarity=0.161  Sum_probs=110.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.......     .+++|.+...    ......+.+|+.+++.++|+||+++++.+..+  
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--   73 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQ-----RFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETK--   73 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCc-----EEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC--
Confidence            467888999999999999999887654     3777776532    23345688999999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIl  133 (305)
T cd05609          74 RHLCMVMEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLL  133 (305)
T ss_pred             CEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEE
Confidence            78999999999999999997653   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=4e-21  Score=180.56  Aligned_cols=127  Identities=22%  Similarity=0.272  Sum_probs=109.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||.|+||.||.+++..+..+     ||||++.-    +......++.||..|+++.|||+|.+-|+|..+  ..
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~ev-----VAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre--~T  100 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEV-----VAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE--HT  100 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccce-----eeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc--ch
Confidence            55668899999999999999877764     89999873    334567799999999999999999999999985  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .|||||||-| +-.|+|.-...  ++.+.++..|+.+++.||.|||+.   +.||||||..||+
T Consensus       101 aWLVMEYClG-SAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNIL  158 (948)
T KOG0577|consen  101 AWLVMEYCLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNIL  158 (948)
T ss_pred             HHHHHHHHhc-cHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceE
Confidence            8999999965 77787776532  588999999999999999999995   6899999999995

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.82  E-value=1.2e-19  Score=163.10  Aligned_cols=124  Identities=16%  Similarity=0.175  Sum_probs=105.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||+|.+..++.     .+++|.+..  .......|.+|+.++.+++|+||+++++++...  +..
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~~   74 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRR-----ILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVE--NRI   74 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCc-----EEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC--CEE
Confidence            56677899999999999999876654     277777653  234456799999999999999999999999884  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|..+.       .+++..+..++.|++.||.|||+.   +|+|+||||+||+
T Consensus        75 ~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  127 (279)
T cd06619          75 SICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNML  127 (279)
T ss_pred             EEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEE
Confidence            9999999999996542       378889999999999999999995   6999999999984

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.82  E-value=1e-20  Score=154.55  Aligned_cols=128  Identities=17%  Similarity=0.242  Sum_probs=108.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chh-hHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQG-VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...++||+|.||+||+++..++.++     |++|++..+  .++ -..-++|+.+|+.++|.|||+|++....+  ..
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~ei-----valkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd--kk   75 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEI-----VALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--KK   75 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccce-----EEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC--ce
Confidence            355558899999999999999988874     888877632  222 34578999999999999999999998875  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +-||+|||.. +|..+...-+  ..++.+.+..++.|+++||.|+|++   +++||||||.|.+
T Consensus        76 ltlvfe~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnll  133 (292)
T KOG0662|consen   76 LTLVFEFCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLL  133 (292)
T ss_pred             eEEeHHHhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEE
Confidence            9999999965 8988887754  2589999999999999999999995   7999999999963

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.82  E-value=6.1e-20  Score=165.38  Aligned_cols=130  Identities=15%  Similarity=0.207  Sum_probs=109.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||++.+..++..     +++|.+..  .....+.|.+|+++++.++|+||+++++++...  +.
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~-----~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~   77 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTV-----MAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE--NN   77 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcE-----EEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC--CE
Confidence            3466668999999999999998765542     56665542  234457799999999999999999999999885  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||||+++|+|.+++....   .+++..+..++.+++.||.|||+.  .+|+||||||+||+
T Consensus        78 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil  136 (284)
T cd06620          78 ICMCMEFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNIL  136 (284)
T ss_pred             EEEEEecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEE
Confidence            999999999999999987643   589999999999999999999974  26999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.82  E-value=1.1e-19  Score=164.56  Aligned_cols=127  Identities=17%  Similarity=0.283  Sum_probs=107.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc------hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS------QGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+....      .....+..|+.+++.++|+||+++++++.++  
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--   74 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGR-----IVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK--   74 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCc-----EEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC--
Confidence            6667899999999999999876554     37777775322      2234577899999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+ +|+|.+++....  ..+++..++.++.||+.||.|||++   +|+|+||||+||+
T Consensus        75 ~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil  134 (298)
T cd07841          75 SNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLL  134 (298)
T ss_pred             CEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEE
Confidence            8899999999 899999997653  2599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.82  E-value=1e-20  Score=182.56  Aligned_cols=147  Identities=16%  Similarity=0.310  Sum_probs=124.0

Q ss_pred             CccccCHHHHHHHhCCC---------CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHH
Q 021173          161 TLRNFPLDEVAAACHNF---------FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNT  229 (316)
Q Consensus       161 ~~~~~~~~ei~~~t~~f---------~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~  229 (316)
                      ....++||+-..+...|         .++++||.|.||.||+|+++-.+.  +.+.||||.++.  .......|+.|+.|
T Consensus       606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgk--re~~VAIKTLK~GytekqrrdFL~EAsI  683 (996)
T KOG0196|consen  606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGK--REITVAIKTLKAGYTEKQRRDFLSEASI  683 (996)
T ss_pred             ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCC--cceeEEEeeeccCccHHHHhhhhhhhhh
Confidence            34456777655555444         456899999999999999976553  234699999984  44556789999999


Q ss_pred             HHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 021173          230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY  309 (316)
Q Consensus       230 l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrD  309 (316)
                      |.+++||||++|.|+...  ...++||.|||+||+|+.+|+.+. + .|.+.+...++++||.||.||-+   ++.||||
T Consensus       684 MGQFdHPNIIrLEGVVTk--s~PvMIiTEyMENGsLDsFLR~~D-G-qftviQLVgMLrGIAsGMkYLsd---m~YVHRD  756 (996)
T KOG0196|consen  684 MGQFDHPNIIRLEGVVTK--SKPVMIITEYMENGSLDSFLRQND-G-QFTVIQLVGMLRGIASGMKYLSD---MNYVHRD  756 (996)
T ss_pred             cccCCCCcEEEEEEEEec--CceeEEEhhhhhCCcHHHHHhhcC-C-ceEeehHHHHHHHHHHHhHHHhh---cCchhhh
Confidence            999999999999999987  488999999999999999999875 3 49999999999999999999999   5789999


Q ss_pred             cCCCCCC
Q 021173          310 FEMIKTE  316 (316)
Q Consensus       310 lKp~NI~  316 (316)
                      |...||+
T Consensus       757 LAARNIL  763 (996)
T KOG0196|consen  757 LAARNIL  763 (996)
T ss_pred             hhhhhee
Confidence            9999996

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.82  E-value=1.5e-19  Score=162.45  Aligned_cols=129  Identities=19%  Similarity=0.229  Sum_probs=108.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|.....||+|+||.||+|.+..++.     .+++|.+...   ....+.+.+|+.+++.++|+||+++++++...  +
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~   73 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQ-----IVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK--R   73 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCc-----EEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC--C
Confidence            357778999999999999999986554     2677766422   22335688999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||++++.|..++....   .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil  132 (286)
T cd07847          74 KLHLVFEYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENIL  132 (286)
T ss_pred             EEEEEEeccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEE
Confidence            8999999999988887776533   489999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.82  E-value=1.5e-20  Score=160.32  Aligned_cols=138  Identities=18%  Similarity=0.197  Sum_probs=117.7

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC---
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD---  248 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~---  248 (316)
                      ..+.|.+.+.||+|+|+.||++..-.+..     .+|+|++.. ..++.+..++|++..++++||||++++++...+   
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~-----~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D   93 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGH-----LYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD   93 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCccc-----chhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence            34568888999999999999998655544     289998874 446778899999999999999999999987653   


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +....||++.|...|+|.+.|.... ++..+++.+.+.|+.+|++||++||+..+ +..||||||.||+
T Consensus        94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NIL  161 (302)
T KOG2345|consen   94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANIL  161 (302)
T ss_pred             CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeE
Confidence            3466899999999999999998754 35579999999999999999999999764 7999999999995

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.82  E-value=1.1e-19  Score=160.96  Aligned_cols=136  Identities=15%  Similarity=0.145  Sum_probs=111.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||.|+||.||++....++..     +++|.+..   .....+.+..|+.+++.++|+||+++++++.......
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKI-----LVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCE-----EEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCE
Confidence            466778999999999999998766542     66666642   3344567899999999999999999999887654567


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEG--PFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~--~~~IiHrDlKp~NI~  316 (316)
                      .+++|||+.+++|.+++.... ....+++..++.++.|++.||.|||..+  ..+|+|+||||+||+
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nil  142 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIF  142 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEE
Confidence            899999999999999997632 2346899999999999999999999321  157999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.82  E-value=1.2e-20  Score=165.72  Aligned_cols=137  Identities=15%  Similarity=0.208  Sum_probs=111.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--h-hHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--G-VKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ...|.....||+|.||.||++.-.+++..- ...+|+|.++....  + ...-.+|+.+++.++|+||+.|..++... .
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr-~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~-d  100 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKR-TKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH-D  100 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCccc-chhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-C
Confidence            346777899999999999999765554311 12488998874322  2 24467999999999999999999988874 3


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS--DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~--~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++|++||.++ +|.+.|+...  ....++...+..|+.||+.|+.|||++   -|+||||||+||+
T Consensus       101 ~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIl  164 (438)
T KOG0666|consen  101 KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANIL  164 (438)
T ss_pred             ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEE
Confidence            789999999998 9999888543  245689999999999999999999997   5999999999994

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.82  E-value=7.2e-20  Score=163.00  Aligned_cols=132  Identities=21%  Similarity=0.258  Sum_probs=110.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..    .......|.+|+.+++.++|+||+++++++...  
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--   74 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGV-----PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--   74 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCc-----eEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC--
Confidence            467777999999999999999865554     267776542    223446789999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++++|.+++.... ....+++..++.++.||+.||.|||+.   +|+|+||||+||.
T Consensus        75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nil  138 (267)
T cd08229          75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVF  138 (267)
T ss_pred             CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            78999999999999999987422 134589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.82  E-value=1.5e-19  Score=165.27  Aligned_cols=128  Identities=15%  Similarity=0.181  Sum_probs=102.3

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEecC
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL  260 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~  260 (316)
                      ..||+|+||.||+|...++...   ..+++|.+.... ....+.+|+.+|+.++|+||+++++++........++||||+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~---~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDE---KEYALKQIEGTG-ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA   82 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCcc---ceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence            6899999999999997653321   237888776432 234578999999999999999999998765457889999998


Q ss_pred             CCCCHHHHHhcCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          261 FHGSLDRLIYGRS------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       261 ~~GsL~~~L~~~~------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+ +|.+++....      ....+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil  140 (317)
T cd07867          83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANIL  140 (317)
T ss_pred             CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEE
Confidence            75 8888775321      123488999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.82  E-value=8.1e-20  Score=169.25  Aligned_cols=132  Identities=11%  Similarity=0.145  Sum_probs=108.9

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .+++|.+...   ....+.+.+|+.+|+.++|+||+++++++...
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQ-----KVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA   86 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCC-----EEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence            345789999999999999999999876654     3788877632   23345678999999999999999999987642


Q ss_pred             C----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 G----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .    ....|++||++ +++|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        87 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil  150 (343)
T cd07878          87 TSIENFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVA  150 (343)
T ss_pred             ccccccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEE
Confidence            1    24578999988 77998888643    499999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.82  E-value=1.7e-19  Score=160.02  Aligned_cols=123  Identities=14%  Similarity=0.249  Sum_probs=102.5

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      .||+|+||.||+|.+......   ..+++|.+...   ....+.|.+|+.+++.++|+||+++++++..   +..++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSE---KTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCc---eEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEEEEe
Confidence            589999999999986432210   13788877532   3345679999999999999999999999864   67799999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+|+|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        76 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nil  127 (257)
T cd05116          76 LAELGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVL  127 (257)
T ss_pred             cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEE
Confidence            999999999997643   489999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.9e-20  Score=169.87  Aligned_cols=129  Identities=18%  Similarity=0.283  Sum_probs=108.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC--CCCCcceeeeEEEcCC--C
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL--QHPNLCKLLGFHARDG--S  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~HpnIv~l~g~~~~~~--~  250 (316)
                      ......+.||+|.||.||+|.|++..       ||||.+..  .+.+.|.+|.+|.+.+  +|+||+.|++.-..+.  -
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrGe~-------VAVKiF~s--rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~  281 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRGED-------VAVKIFSS--RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW  281 (513)
T ss_pred             heeEEEEEecCccccceeeccccCCc-------eEEEEecc--cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence            44666799999999999999999986       88998863  3345678888888875  8999999998755432  2


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE-----GPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~-----~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||.+|.++|+|+|||...    .++.+..++++..+|.||+|||.+     |...|.|||||..||+
T Consensus       282 TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNIL  348 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  348 (513)
T ss_pred             EEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEE
Confidence            5689999999999999999985    499999999999999999999963     5468999999999995

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.82  E-value=1.4e-19  Score=163.34  Aligned_cols=129  Identities=13%  Similarity=0.169  Sum_probs=108.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|....++.     .+++|.+...  ......+.+|+++++.++|+||+++++++.++  +.
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~   77 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQ-----LVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTK--KT   77 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCc-----EEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecC--Ce
Confidence            568888999999999999999876554     3788877532  22234577899999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+ +|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        78 ~~lv~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil  135 (291)
T cd07844          78 LTLVFEYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLL  135 (291)
T ss_pred             EEEEEecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEE
Confidence            9999999985 9999887653  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.82  E-value=1.5e-19  Score=159.78  Aligned_cols=130  Identities=15%  Similarity=0.186  Sum_probs=110.6

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++....++.     .+++|.+..   .......+.+|+.+++.++|+||+++++.+...  +.
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~   73 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQK-----LVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED--KA   73 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCc-----EEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC--CE
Confidence            46777999999999999999876654     367776653   234456799999999999999999999988763  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++.... +..+++..++.++.+++.||.|||++   +|+|+||||+||.
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil  133 (256)
T cd08220          74 LMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNIL  133 (256)
T ss_pred             EEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            999999999999999998753 33589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.82  E-value=1e-19  Score=169.76  Aligned_cols=130  Identities=15%  Similarity=0.150  Sum_probs=107.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||++.+..++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++....
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   93 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGI-----NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK   93 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCc-----eeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence            45778889999999999999999876654     378887753   2344567889999999999999999999986532


Q ss_pred             ----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ...+|+||||+.+ +|.+.+..     .+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        94 ~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl  155 (359)
T cd07876          94 SLEEFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  155 (359)
T ss_pred             CccccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence                1357999999975 67776643     388899999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.82  E-value=1.7e-19  Score=162.04  Aligned_cols=130  Identities=17%  Similarity=0.262  Sum_probs=109.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||.|+||.||+|.+..++.     .+++|.+...  ......+.+|+.+++.++|+||+++++++.+.  +..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~   73 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGE-----IVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTE--NKL   73 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCe-----EEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC--CcE
Confidence            47778999999999999999976654     3778877532  22345678999999999999999999999884  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+.+ +|.+++........+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~  132 (284)
T cd07836          74 MLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLL  132 (284)
T ss_pred             EEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEE
Confidence            999999985 8988887654334589999999999999999999994   6999999999983

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.82  E-value=1.8e-19  Score=159.48  Aligned_cols=127  Identities=20%  Similarity=0.252  Sum_probs=107.2

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      +.||+|+||.||+|.+.....  ....+++|.+....  ...+.|.+|+.++++++|+||+++++++..   ...++|||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~v~e   75 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGG--KVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPLMMVTE   75 (257)
T ss_pred             CcCCccCcccEEeeeEecCCC--CceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeEEEEEE
Confidence            468999999999999865322  11247888887433  456789999999999999999999999876   78899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++..... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+
T Consensus        76 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil  129 (257)
T cd05040          76 LAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNIL  129 (257)
T ss_pred             ecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEE
Confidence            9999999999987542 4689999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.81  E-value=1.8e-19  Score=160.43  Aligned_cols=127  Identities=17%  Similarity=0.231  Sum_probs=107.2

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----------hhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----------QGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      |.....||+|+||.||+|.+..++.     .+++|.+....          ...+.+.+|+.++++++|+||+++++++.
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGE-----LMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL   76 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCc-----EEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE
Confidence            5667899999999999999866543     26777664211          12356889999999999999999999988


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++  +..++||||+++++|.+++....   .+++..+..++.|++.||+|||+.   +|+||||+|+||.
T Consensus        77 ~~--~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil  138 (267)
T cd06628          77 DA--DHLNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANIL  138 (267)
T ss_pred             eC--CccEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEE
Confidence            74  78999999999999999997653   489999999999999999999995   6999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.81  E-value=1.8e-19  Score=161.06  Aligned_cols=128  Identities=17%  Similarity=0.233  Sum_probs=107.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-----------chhhHhHHHHHHHHHhCCCCCcceeeeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----------SQGVKEFINDVNTLASLQHPNLCKLLGF  244 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~E~~~l~~l~HpnIv~l~g~  244 (316)
                      +|...+.||+|+||.||+|....++.     .+++|.+...           ....+.+..|+.+++.++|+||++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGE-----MMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCc-----eeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence            36667899999999999999876554     2677765421           1123467889999999999999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..  .+..++||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +++||||+|+||.
T Consensus        77 ~~~--~~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil  140 (272)
T cd06629          77 ETT--EEYLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLL  140 (272)
T ss_pred             ecc--CCceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEE
Confidence            887  488999999999999999998753   589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.81  E-value=2.1e-19  Score=158.68  Aligned_cols=129  Identities=19%  Similarity=0.344  Sum_probs=107.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      +.||+|+||.||+|.+.....  ....+++|.+.....  ..+.+.+|+.++..++|+||+++++++..  .+..++|||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDG--KTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCCC--CCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCceEEEEE
Confidence            468999999999999875410  012378888774333  36789999999999999999999999987  488999999


Q ss_pred             cCCCCCHHHHHhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSD------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++.....      ...+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nil  137 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCL  137 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEE
Confidence            9999999999987511      23699999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=3e-21  Score=182.54  Aligned_cols=128  Identities=16%  Similarity=0.227  Sum_probs=110.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC-CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      |.+...||.|+||+||++..+.+..     ..|-|.+. .+...++.|+.||+||..++||+||+|++.|..+  +.+||
T Consensus        34 WeIiGELGDGAFGKVyKA~nket~~-----lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e--nkLwi  106 (1187)
T KOG0579|consen   34 WEIIGELGDGAFGKVYKAVNKETKL-----LAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE--NKLWI  106 (1187)
T ss_pred             HHHHhhhcCccchhhhhhhcccchh-----hhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--CceEE
Confidence            4445678999999999999987764     25566665 4667788999999999999999999999877765  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.|||.||-....+-..  ++.|.+.++.-+++|++.||.|||++   +|||||||..||+
T Consensus       107 liEFC~GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL  162 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNIL  162 (1187)
T ss_pred             EEeecCCchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceE
Confidence            99999999998888775  34699999999999999999999994   7999999999995

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.81  E-value=4.8e-20  Score=161.11  Aligned_cols=132  Identities=11%  Similarity=0.160  Sum_probs=110.5

Q ss_pred             HHhCCCCCc-ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEc--
Q 021173          172 AACHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHAR--  247 (316)
Q Consensus       172 ~~t~~f~~~-~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~--  247 (316)
                      ..+++|.+. .+||-|-.|.|..|..+.+++     ++|+|.+.....    -.+|+++--.. .|+|||.++++|..  
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~e-----kfALKvL~Ds~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~  128 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQE-----KFALKVLLDSPK----ARREVELHWMASGHPHIVSIIDVYENSY  128 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchh-----hhHHHHHhcCHH----HHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence            356777653 789999999999999988776     489998874433    35777765555 59999999999876  


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+...+.+|||+|+||.|+..|+.++ ...|++.++..|+.||+.|+.|||+   ++|.||||||+|++
T Consensus       129 ~~rkcLLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLL  193 (400)
T KOG0604|consen  129 QGRKCLLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLL  193 (400)
T ss_pred             cCceeeEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhhee
Confidence            33567889999999999999999886 4579999999999999999999999   68999999999985

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.81  E-value=2.6e-19  Score=158.44  Aligned_cols=131  Identities=17%  Similarity=0.197  Sum_probs=109.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++....++.     .+++|.+..   .....+.+.+|+++++.++|+||+++++.+... ...
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~~   74 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGK-----QYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DGL   74 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCc-----EEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CCE
Confidence            47778999999999999999876654     377777653   233456689999999999999999999887643 256


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++||||+++++|.+++.... ...+++.+++.++.+++.||.|||+.   +|+||||||+||.
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil  134 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVF  134 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEE
Confidence            899999999999999998643 33589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.81  E-value=2.2e-19  Score=158.68  Aligned_cols=129  Identities=16%  Similarity=0.209  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..... .+++.+|+++++.++|+||+++++++.+.  ...|
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~   74 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQ-----VVAIKVVPVEED-LQEIIKEISILKQCDSPYIVKYYGSYFKN--TDLW   74 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCc-----EEEEEEeecHHH-HHHHHHHHHHHHhCCCCcEeeeeeeeecC--CcEE
Confidence            568888999999999999999987543     277787764333 67899999999999999999999999874  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||+.+++|.+++....  ..+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        75 l~~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~  131 (256)
T cd06612          75 IVMEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNIL  131 (256)
T ss_pred             EEEecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence            9999999999999997643  3589999999999999999999995   6999999999983

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.81  E-value=1.8e-19  Score=164.99  Aligned_cols=137  Identities=17%  Similarity=0.282  Sum_probs=109.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||++...+...  ......+++|.+..  .......+.+|+.+++.+ +|+||++++++|... 
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-   90 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE-   90 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC-
Confidence            456777999999999999998643211  00112377787763  233456789999999999 599999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+.+|+|.+++.....             ...+++.+++.++.|++.||.|||++   +|+||||||+||+
T Consensus        91 -~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nil  166 (314)
T cd05099          91 -GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVL  166 (314)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEE
Confidence             779999999999999999976321             23589999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.81  E-value=6.8e-20  Score=162.49  Aligned_cols=128  Identities=17%  Similarity=0.166  Sum_probs=110.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +|...+.||.|+||.||+|.+..++.     .+++|.+...    ....+.+.+|++++++++|+||+++++++.+  .+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~   73 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKK-----MFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQD--EE   73 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCc-----EEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcC--CC
Confidence            47778999999999999999876554     3777776532    2446779999999999999999999998876  48


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+++|.+++....   .+++..+..|+.|++.||.|||+.   +|+|+||+|+||.
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil  132 (258)
T cd05578          74 NMYLVVDLLLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNIL  132 (258)
T ss_pred             eEEEEEeCCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeE
Confidence            8999999999999999997652   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3.1e-19  Score=158.18  Aligned_cols=130  Identities=17%  Similarity=0.198  Sum_probs=111.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||.|+||.||++.+..+..     .+++|.+.. .....+.+.+|+++++.++|+||+++++++.+.  +.+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--~~~   75 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGE-----LVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR--DKL   75 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCC-----EEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeC--CEE
Confidence            567888999999999999999876554     266676653 233567799999999999999999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|||+.+++|.+++....  ..+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        76 ~l~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~  133 (262)
T cd06613          76 WIVMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANIL  133 (262)
T ss_pred             EEEEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEE
Confidence            99999999999999987652  2589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=1.9e-19  Score=160.42  Aligned_cols=136  Identities=22%  Similarity=0.270  Sum_probs=114.4

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC--
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG--  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~--  249 (316)
                      .+++|...+.||+|+||.||+|.+..++.     .+++|.+.........|.+|+.+++++ .|+||+++++++.+..  
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   78 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQ-----LVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP   78 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCc-----EEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC
Confidence            46788899999999999999999976554     377777765555567899999999999 6999999999997632  


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        .+.+++||||+.+++|.+++.... .+..+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~  145 (275)
T cd06608          79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNIL  145 (275)
T ss_pred             CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEE
Confidence              356899999999999999987532 133589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.81  E-value=3.2e-19  Score=160.16  Aligned_cols=126  Identities=18%  Similarity=0.240  Sum_probs=107.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+..  .......|.+|+.++..++|+||+++++++..+  +..+
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~   78 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TKLW   78 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCc-----EEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC--CeEE
Confidence            5566889999999999999876554     377777653  233456788999999999999999999999874  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++...    .+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        79 lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~  133 (277)
T cd06641          79 IIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVL  133 (277)
T ss_pred             EEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEE
Confidence            999999999999998753    489999999999999999999994   6999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.81  E-value=4e-19  Score=157.00  Aligned_cols=127  Identities=20%  Similarity=0.264  Sum_probs=107.4

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      |...+.||+|+||.||+|....++.     .+++|.+..      .....+.+.+|+.+++.++|+||+++++++.+.  
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--   74 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGD-----FFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE--   74 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCc-----EEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC--
Confidence            6667899999999999999874443     256665532      123456799999999999999999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++++|.+++....   .+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~  134 (258)
T cd06632          75 DNLYIFLELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANIL  134 (258)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            78999999999999999997643   489999999999999999999995   6999999999983

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.81  E-value=1.2e-19  Score=161.74  Aligned_cols=131  Identities=21%  Similarity=0.331  Sum_probs=105.6

Q ss_pred             ceeeecCceEEEEEEECCCCc-eeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~-~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.||+|+||.||+|.+.+... ......+++|.+....  .....|.+|+.+++.++|+||+++++++...  +..++||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN--EPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC--CCeEEEE
Confidence            368999999999999864320 0011237777765332  4466799999999999999999999999874  7899999


Q ss_pred             ecCCCCCHHHHHhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRS----DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~----~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+++|+|.++|....    ....+++..++.++.|++.||.|||+.   +|+|+||||+||+
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil  138 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCL  138 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEE
Confidence            9999999999997532    123488999999999999999999984   6999999999984

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.81  E-value=2.5e-19  Score=161.83  Aligned_cols=130  Identities=11%  Similarity=0.172  Sum_probs=107.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +++|...+.||+|+||.||+|....++.     .+++|.+...  ......+.+|+.+++.++|+||+++++++...  +
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--~   76 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQ-----LVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTK--E   76 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCc-----EEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC--C
Confidence            4678888999999999999999876554     2778877532  22234678999999999999999999998874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..|+||||+. ++|.+++....  ..+.+..+..++.|++.||.|||+.   +|+|+||||+||+
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil  135 (291)
T cd07870          77 TLTFVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLL  135 (291)
T ss_pred             eEEEEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEE
Confidence            8999999996 68877776542  2478888999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.81  E-value=1.3e-19  Score=160.15  Aligned_cols=130  Identities=15%  Similarity=0.225  Sum_probs=110.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+...   ....+.+.+|+.+++.++|+||+++++++...  +.
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~--~~   73 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSE-----HCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN--GR   73 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCc-----eEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC--Ce
Confidence            46777999999999999999987654     2677776532   23456788999999999999999999998774  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+++|.+++.... +..+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil  133 (257)
T cd08225          74 LFIVMEYCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIF  133 (257)
T ss_pred             EEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEE
Confidence            999999999999999997643 33589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=1.5e-19  Score=175.93  Aligned_cols=139  Identities=12%  Similarity=0.140  Sum_probs=102.8

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEE--------------EEEeeeecCCCchhhHhHHHHHHHHHhCCCCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKK--------------FEATVTRLNPSSQGVKEFINDVNTLASLQHPN  237 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~--------------~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn  237 (316)
                      ...++|...+.||+|+||.||+|.++........              ..+..|.+.........|.+|+.+|++++|+|
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            3457899999999999999999987543221000              00112222223334567899999999999999


Q ss_pred             cceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       238 Iv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~--~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      ||++++++...  +..|+|+|++. ++|..++.....  ........+..|+.||+.||.|||++   +||||||||+||
T Consensus       225 Iv~l~~~~~~~--~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NI  298 (501)
T PHA03210        225 ILKIEEILRSE--ANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENI  298 (501)
T ss_pred             cCcEeEEEEEC--CeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence            99999999884  78899999985 578887765321  11234556778999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      +
T Consensus       299 L  299 (501)
T PHA03210        299 F  299 (501)
T ss_pred             E
Confidence            4

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.81  E-value=2e-19  Score=165.75  Aligned_cols=125  Identities=18%  Similarity=0.156  Sum_probs=104.3

Q ss_pred             ceeeec--CceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEG--LSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G--~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ..||+|  +||+||++.+..++.     .|++|.+..   .....+.+.+|+.+++.++|+||++++++|...  +..++
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--~~~~~   76 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGT-----LVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG--SWLWV   76 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCc-----EEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC--CceEE
Confidence            346666  899999999876554     277777653   223346789999999999999999999999874  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+|+|.+++.... ...+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        77 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nil  133 (328)
T cd08226          77 ISPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHIL  133 (328)
T ss_pred             EEecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            999999999999988753 23589999999999999999999995   6999999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.81  E-value=1.7e-19  Score=168.01  Aligned_cols=130  Identities=14%  Similarity=0.157  Sum_probs=107.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||++.+...+.     .+++|.+..   .......+.+|+.+++.++|+||+++++++....
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   89 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDR-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK   89 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCc-----eEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence            45789889999999999999999876554     378887763   2334567889999999999999999999886531


Q ss_pred             ----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ....++||||+.+ +|.+.+..     .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        90 ~~~~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nil  151 (355)
T cd07874          90 SLEEFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  151 (355)
T ss_pred             cccccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEE
Confidence                2457999999975 67777753     388999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.81  E-value=3.1e-19  Score=160.23  Aligned_cols=127  Identities=17%  Similarity=0.210  Sum_probs=108.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .|...+.||.|+||.||+|.+..++.     .+++|.+..  .......+.+|+.+++.+.|+||+++++++.++  +..
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   77 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQ-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG--TKL   77 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCE-----EEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--CEE
Confidence            35566889999999999999876554     377776653  234566799999999999999999999999884  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+.+|+|.+++...    .+++..+..++.|++.||+|||+.   +|+|+||+|+||.
T Consensus        78 ~lv~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil  133 (277)
T cd06640          78 WIIMEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVL  133 (277)
T ss_pred             EEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEE
Confidence            9999999999999998753    488999999999999999999994   7999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.81  E-value=2.3e-19  Score=163.02  Aligned_cols=128  Identities=21%  Similarity=0.274  Sum_probs=109.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .+|...+.||.|+||.||+|.+..++.     .+++|.+.. .....+.+.+|+.+++.++|+||+.+++++...  +..
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~   91 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQ-----EVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVG--DEL   91 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCc-----EEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecC--ceE
Confidence            357788999999999999999866554     267776653 333456788999999999999999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+|+|..++...    .+++.+++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        92 ~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nil  147 (296)
T cd06655          92 FVVMEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVL  147 (296)
T ss_pred             EEEEEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            9999999999999998754    489999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.81  E-value=5.2e-19  Score=157.06  Aligned_cols=132  Identities=19%  Similarity=0.240  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||.|+||.||+|.+..++.     .+++|.+...  ......+.+|+.+++.++|+||+++++.+...  +.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   73 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNE-----KVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVG--DE   73 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCc-----EEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeC--CE
Confidence            468888999999999999999876554     3777777532  23567799999999999999999999988774  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++........+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~  134 (267)
T cd06610          74 LWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNIL  134 (267)
T ss_pred             EEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEE
Confidence            999999999999999998643223589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.81  E-value=5e-20  Score=169.42  Aligned_cols=126  Identities=24%  Similarity=0.305  Sum_probs=106.9

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC--CCCCcceeeeEEEcCC--CCeE
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL--QHPNLCKLLGFHARDG--SDQR  253 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~HpnIv~l~g~~~~~~--~~~~  253 (316)
                      ....+||+|.||.||+|.+.+..       ||||++.  .+..+.|.+|-+|.+..  +|+||++|+++-..-.  .-.+
T Consensus       213 ~l~eli~~Grfg~V~KaqL~~~~-------VAVKifp--~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~ey  283 (534)
T KOG3653|consen  213 QLLELIGRGRFGCVWKAQLDNRL-------VAVKIFP--EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEY  283 (534)
T ss_pred             hhHHHhhcCccceeehhhccCce-------eEEEecC--HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccce
Confidence            34478999999999999998853       8999885  45667799998887765  7999999998765421  2378


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC------CCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP------FQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~------~~IiHrDlKp~NI~  316 (316)
                      +||+||.+.|+|.++|....    ++|....+|+.-+++||+|||+.-+      ..|+|||||..||+
T Consensus       284 wLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVL  348 (534)
T KOG3653|consen  284 WLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVL  348 (534)
T ss_pred             eEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceE
Confidence            99999999999999999874    9999999999999999999997522      47999999999995

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.81  E-value=3.8e-19  Score=157.03  Aligned_cols=132  Identities=20%  Similarity=0.365  Sum_probs=109.9

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ...+.||.|+||.||++.+...... ....+++|.+.....  ..+.+..|+.++..++|+||+++++++.+.  +..++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~   78 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGE-KEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE--EPLMI   78 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCC-CCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--CeeEE
Confidence            4558899999999999999764410 012378888864332  567899999999999999999999999875  78999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||+.+++|.+++.... ...+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        79 i~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil  135 (258)
T smart00219       79 VMEYMEGGDLLDYLRKNR-PKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCL  135 (258)
T ss_pred             EEeccCCCCHHHHHHhhh-hccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEE
Confidence            999999999999998753 11289999999999999999999995   6999999999984

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.81  E-value=3.8e-19  Score=157.37  Aligned_cols=130  Identities=14%  Similarity=0.194  Sum_probs=110.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||.+....++.     .+++|.+..   .....+++.+|+.++++++|+||+++++++.+.  +.
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   73 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGK-----QYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEEN--GN   73 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCC-----EEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCC--Ce
Confidence            36777999999999999999876654     377776642   233456789999999999999999999998774  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+++|.+++.... ...+++..++.++.|++.||.|||++   +|+|+||+|+||.
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil  133 (256)
T cd08218          74 LYIVMDYCEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIF  133 (256)
T ss_pred             EEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence            999999999999999997643 23589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=1.8e-19  Score=170.26  Aligned_cols=127  Identities=11%  Similarity=0.146  Sum_probs=105.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ...|...+.||+|+||.||+|...+...   ...+++|.+...    ..+.+|+.+|+.++|+||+++++++..+  +..
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~---~~~v~vK~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~--~~~  161 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQ---RKKVIVKAVTGG----KTPGREIDILKTISHRAIINLIHAYRWK--STV  161 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCcc---ceeEEEEecccc----ccHHHHHHHHHhcCCCCccceeeeEeeC--CEE
Confidence            3468888999999999999998754332   123677776532    3456899999999999999999998874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+. ++|.+++....   .+++..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus       162 ~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nil  217 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIF  217 (392)
T ss_pred             EEEehhcC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            99999996 68999885432   599999999999999999999995   6999999999984

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.81  E-value=2.9e-19  Score=160.43  Aligned_cols=132  Identities=20%  Similarity=0.228  Sum_probs=106.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHH-HHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNT-LASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~-l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+...  ......+..|+.+ ++.++|+||+++++++..+  +
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~--~   73 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGT-----IMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFRE--G   73 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCc-----EEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC--C
Confidence            468888999999999999999986654     3788877642  2233456667665 6667899999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||++ |+|.+++.... ....+++..++.++.||+.||.|||++  .+|+||||||+||+
T Consensus        74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil  136 (283)
T cd06617          74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVL  136 (283)
T ss_pred             cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEE
Confidence            8999999997 68988876532 234689999999999999999999985  26999999999984

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.80  E-value=1.4e-19  Score=162.44  Aligned_cols=126  Identities=17%  Similarity=0.229  Sum_probs=107.2

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+..  .....+.+.+|+.+++.++|+||+++++++..+  +..+
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~   78 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKE-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG--TKLW   78 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCe-----EEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC--CceE
Confidence            4444789999999999999876654     377787653  234456789999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+++|.+++...    .+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        79 lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~  133 (277)
T cd06642          79 IIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVL  133 (277)
T ss_pred             EEEEccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEE
Confidence            999999999999998653    489999999999999999999994   6999999999983

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.80  E-value=3.5e-19  Score=158.02  Aligned_cols=128  Identities=20%  Similarity=0.286  Sum_probs=109.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .|...+.||+|+||.||+|.+..++.     .+++|.+....   ...+.+.+|+.+++.++|+||+++++++..  .+.
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~   73 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGE-----LMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVH--REK   73 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCc-----EEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEec--CCE
Confidence            36677999999999999999875543     26777665322   356789999999999999999999999876  488


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|+||+++++|.+++....   .+++..+..|+.+++.||.|||+.   +|+|+||+|+||+
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil  131 (264)
T cd06626          74 VYIFMEYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIF  131 (264)
T ss_pred             EEEEEecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            999999999999999998643   488999999999999999999995   6999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.80  E-value=1.8e-19  Score=167.59  Aligned_cols=125  Identities=14%  Similarity=0.239  Sum_probs=105.3

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      +++||.|.||+||-|..+.++.     .||||.+.+   ......++.+|+.||++++||.||.|.-.|+.  .+.+++|
T Consensus       569 devLGSGQFG~VYgg~hRktGr-----dVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET--~ervFVV  641 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGR-----DVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFET--PERVFVV  641 (888)
T ss_pred             HhhccCCcceeeecceecccCc-----eeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecC--CceEEEE
Confidence            4899999999999999988775     488888863   34455789999999999999999999877776  5999999


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||.+.| +..++|-... ...+++.....++.||+.||.|||.   ++|+|.||||+||+
T Consensus       642 MEKl~G-DMLEMILSsE-kgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVL  696 (888)
T KOG4236|consen  642 MEKLHG-DMLEMILSSE-KGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVL  696 (888)
T ss_pred             ehhhcc-hHHHHHHHhh-cccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchhee
Confidence            999966 5555555443 2359999999999999999999999   57999999999985

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.80  E-value=1.5e-19  Score=162.53  Aligned_cols=129  Identities=18%  Similarity=0.232  Sum_probs=108.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+.+++.     .+++|.+...   ....+.+.+|+++++.++|+||+++++++..+  +
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~   73 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQ-----IVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRK--K   73 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCC-----EEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccC--C
Confidence            357778999999999999999976554     2777776532   22345688999999999999999999999774  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+++|..++....   .+++..++.++.||+.||.|||+.   +|+|+||+|+||.
T Consensus        74 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~  132 (286)
T cd07846          74 RLYLVFEFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENIL  132 (286)
T ss_pred             eEEEEEecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            8999999999999988776543   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.80  E-value=3.1e-19  Score=160.41  Aligned_cols=128  Identities=13%  Similarity=0.244  Sum_probs=108.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++...  +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~   73 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGE-----TVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHG--SG   73 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCc-----eEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecC--Ce
Confidence            36677899999999999999876554     2677766532   23356789999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+ +++|.+++....  ..+++..+..++.||+.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~  131 (286)
T cd07832          74 FVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLL  131 (286)
T ss_pred             eEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEE
Confidence            99999999 999999987653  3599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.80  E-value=2.8e-19  Score=162.15  Aligned_cols=128  Identities=22%  Similarity=0.254  Sum_probs=109.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||++....++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++...  +..
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~   91 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQ-----EVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVG--DEL   91 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCC-----EEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeC--CcE
Confidence            567778999999999999998765543     267777653 333456789999999999999999999999874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+|+||+++|+|.+++...    .+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        92 ~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nil  147 (293)
T cd06647          92 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL  147 (293)
T ss_pred             EEEEecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEE
Confidence            9999999999999999764    388999999999999999999995   6999999999983

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.80  E-value=3.9e-19  Score=160.17  Aligned_cols=131  Identities=17%  Similarity=0.213  Sum_probs=103.6

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhC---CCCCcceeeeEEEcC-
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASL---QHPNLCKLLGFHARD-  248 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~~-  248 (316)
                      .|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.+++.+   +|+||+++++++... 
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~   75 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGH-----FVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR   75 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCc-----EEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc
Confidence            36677999999999999999987665     2677766532   12223466788777766   699999999988652 


Q ss_pred             --CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 --GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 --~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        .....++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        76 ~~~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nil  140 (288)
T cd07863          76 TDRETKVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENIL  140 (288)
T ss_pred             CCCCceEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence              13568999999975 8998887643 23589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.80  E-value=4.2e-19  Score=160.51  Aligned_cols=133  Identities=14%  Similarity=0.176  Sum_probs=107.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCC-
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDG-  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~-  249 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.+++.+. |+||+++++++.... 
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~   75 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGK-----LVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEK   75 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCc-----EEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCC
Confidence            467888999999999999999987664     3777766532   223456889999999995 699999999887641 


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~~~--~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ....|+||||+.+ +|.+++.....  ...+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        76 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil  142 (295)
T cd07837          76 NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLL  142 (295)
T ss_pred             CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEE
Confidence              1237999999985 89888875431  23589999999999999999999995   7999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.80  E-value=2.9e-19  Score=161.61  Aligned_cols=131  Identities=19%  Similarity=0.236  Sum_probs=108.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++..     +++|.+...   ......+.+|+.++.+++|+||+++++++.....+
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   79 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEI-----VALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLD   79 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcE-----EEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCC
Confidence            4677779999999999999999866542     666666522   22234577899999999999999999998875447


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.+ +|.+++....  ..+++..++.++.||+.||.|||+.   +|+|+||||+||.
T Consensus        80 ~~~lv~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nil  138 (293)
T cd07843          80 KIYMVMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLL  138 (293)
T ss_pred             cEEEEehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEE
Confidence            89999999974 9999887653  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.80  E-value=2.7e-19  Score=160.90  Aligned_cols=129  Identities=22%  Similarity=0.282  Sum_probs=108.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||.|+||.||+|.+..++.     .+++|.+...   ......+.+|++++++++|+||+++++++.+.  +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~   73 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE--NK   73 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCC-----EEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccC--Cc
Confidence            47778999999999999999876554     2777776532   22335688999999999999999999998774  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+. ++|..++.... ...+++..+..++.|++.||+|||+.   +|+|+||+|+||.
T Consensus        74 ~~~v~e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nil  132 (284)
T cd07860          74 LYLVFEFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL  132 (284)
T ss_pred             EEEEeeccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            999999996 68999887643 33589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=4.6e-19  Score=163.57  Aligned_cols=133  Identities=15%  Similarity=0.198  Sum_probs=114.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-----C---CCcceeeeEEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-----H---PNLCKLLGFHA  246 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----H---pnIv~l~g~~~  246 (316)
                      +.|...++||-|-|++||+|++..+..     .||+|+.+......+.-+.||.+|++++     |   .+||+|+++|.
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r-----~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk  152 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKR-----YVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK  152 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCe-----EEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence            567788999999999999999987764     3999999877777888899999999983     2   36999999998


Q ss_pred             cCC--CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDG--SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~--~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+  +.++|||+|++ |-+|..+|.... -+.++...+..|++||+.||+|||.++  +|||-||||+||+
T Consensus       153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvL  220 (590)
T KOG1290|consen  153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVL  220 (590)
T ss_pred             ecCCCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceee
Confidence            754  46899999998 568988888754 235999999999999999999999985  7999999999985

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=1.2e-20  Score=172.15  Aligned_cols=128  Identities=16%  Similarity=0.207  Sum_probs=112.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .|...++||+|.||.||+|.+..+..+     ||+|.+..  .....+.+..|+.+|.+++++||.++||.|..  +..+
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~-----vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~--g~~L   86 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKV-----VAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLK--GTKL   86 (467)
T ss_pred             ccccchhccccccceeeeeeeccccce-----EEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheee--cccH
Confidence            366668999999999999999887763     89998873  45556788999999999999999999999988  4889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |++||||.||++.++|....   .+++..+.-|+++++.||.|||.+   +.||||||+.||+
T Consensus        87 wiiMey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil  143 (467)
T KOG0201|consen   87 WIIMEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANIL  143 (467)
T ss_pred             HHHHHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceeccccccccee
Confidence            99999999999999998754   458888888999999999999995   6899999999985

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.80  E-value=1.6e-19  Score=163.82  Aligned_cols=122  Identities=17%  Similarity=0.241  Sum_probs=105.0

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      ..||+|+||.||++....++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++...  +..++||||
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~--~~~~lv~e~  100 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGK-----QVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG--DELWVVMEF  100 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCC-----EEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC--CeEEEEEeC
Confidence            679999999999999876554     277777653 334456789999999999999999999998874  889999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus       101 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil  150 (292)
T cd06658         101 LEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSIL  150 (292)
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEE
Confidence            9999999988643    389999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.80  E-value=6e-19  Score=155.65  Aligned_cols=123  Identities=18%  Similarity=0.314  Sum_probs=105.6

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ++||+|+||.||++.+.++..      +++|.+....  .....|.+|+.++++++|+||+++++++...  +..++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~------v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~~v~e   72 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTE------VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQK--QPIYIVME   72 (251)
T ss_pred             CccccCCCceEEEEEEeCCCc------EEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC--CCeEEEEE
Confidence            468999999999999876443      7788766322  3456799999999999999999999999874  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+++|.+++....  ..+++..++.++.+++.||.|||++   +|+||||||+||+
T Consensus        73 ~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nil  125 (251)
T cd05041          73 LVPGGSLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCL  125 (251)
T ss_pred             cCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEE
Confidence            999999999997643  2588999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.80  E-value=4.2e-19  Score=159.37  Aligned_cols=123  Identities=15%  Similarity=0.178  Sum_probs=103.7

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||+|+||.||+|....++.     .+++|.+..    .......+.+|+++|+.++|+||+++++++...  +..|+|||
T Consensus         1 lg~g~~g~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~lv~e   73 (277)
T cd05577           1 LGKGGFGEVCACQVKATGK-----MYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETK--DDLCLVMT   73 (277)
T ss_pred             CCCCCceeEEEEEEcCCCc-----EEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecC--CeEEEEEe
Confidence            6899999999999876654     267776642    122345678899999999999999999998774  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++++|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||+|+||.
T Consensus        74 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil  127 (277)
T cd05577          74 LMNGGDLKYHIYNVG-EPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVL  127 (277)
T ss_pred             cCCCCcHHHHHHHcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence            999999999998654 23589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.80  E-value=4.1e-19  Score=166.03  Aligned_cols=130  Identities=13%  Similarity=0.150  Sum_probs=107.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||++.+...+.     .+++|.+..   .......+.+|+.+++.++|+||+.+++++....
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~   96 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILER-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK   96 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCc-----EEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence            35678888999999999999999876654     378887763   2334567889999999999999999999876421


Q ss_pred             ----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ...+|+||||+.+ +|.+++..     .+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        97 ~~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  158 (364)
T cd07875          97 SLEEFQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  158 (364)
T ss_pred             cccccCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEE
Confidence                2457999999975 78777753     388899999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.80  E-value=8.6e-19  Score=155.41  Aligned_cols=129  Identities=19%  Similarity=0.260  Sum_probs=112.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||++....++.     .+++|.+....  .....+.+|+.++..++|+||+++++++...  +.
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~-----~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   73 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGK-----IYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKE--GE   73 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCc-----EEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccC--Ce
Confidence            467788999999999999999987554     37778776432  4467799999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~-~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++....   .+++..++.++.|++.||.|||+ .   +++|+||+|+||.
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~  132 (264)
T cd06623          74 ISIVLEYMDGGSLADLLKKVG---KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLL  132 (264)
T ss_pred             EEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEE
Confidence            999999999999999998653   58999999999999999999999 6   5999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=6.2e-19  Score=157.95  Aligned_cols=127  Identities=20%  Similarity=0.226  Sum_probs=108.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCC---CCCcceeeeEEEcCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGS  250 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~  250 (316)
                      .|...+.||+|+||.||+|.+..++.     .+++|.+..  ......++.+|+.+++.++   |+||+++++++...  
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~--   74 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGR-----VVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG--   74 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCc-----EEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC--
Confidence            46667899999999999999866554     377887653  3344567889999999997   99999999998874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++||||+++++|.+++...    .+++..++.++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~  133 (277)
T cd06917          75 PRLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANIL  133 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEE
Confidence            7899999999999999998654    489999999999999999999994   7999999999984

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.80  E-value=5.6e-19  Score=158.08  Aligned_cols=127  Identities=19%  Similarity=0.208  Sum_probs=110.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||.|+||.||+|.+..++.     .+++|.+...  ......+.+|+.+++.++|+||+++++++.++  ..+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   74 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQ-----VVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG--SKL   74 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCe-----EEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC--CeE
Confidence            57777899999999999999887654     3777776532  34456789999999999999999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|+||+.+++|.+++...    .+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        75 ~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~  130 (274)
T cd06609          75 WIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANIL  130 (274)
T ss_pred             EEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence            9999999999999999864    489999999999999999999994   6999999999973

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=3.9e-20  Score=184.54  Aligned_cols=135  Identities=11%  Similarity=0.020  Sum_probs=118.3

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGF  244 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~  244 (316)
                      ++....++|.+.++||+|+||.|..++.+.++.+     +|+|++++    ......-|..|-.+|..-+.+.|+.|+-.
T Consensus        69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~V-----YAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA  143 (1317)
T KOG0612|consen   69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKV-----YAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA  143 (1317)
T ss_pred             HHhCCHHhhHHHHHhcccccceeEEEEeeccccc-----hhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence            3444557999999999999999999999988764     99999985    23344568999999999999999999888


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.++  +++|||||||+||||..+|....   .+++..+..|+.+|..||+-||+   ++.|||||||+||+
T Consensus       144 FQD~--~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvL  207 (1317)
T KOG0612|consen  144 FQDE--RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVL  207 (1317)
T ss_pred             hcCc--cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeE
Confidence            8885  89999999999999999998764   59999999999999999999999   57899999999985

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.79  E-value=6.8e-19  Score=160.56  Aligned_cols=132  Identities=20%  Similarity=0.248  Sum_probs=108.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.++++++|+||+++++++.....
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGE-----IVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHL   80 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCc-----EEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCC
Confidence            4678888999999999999999977654     2677766422   1222346789999999999999999999876544


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+ +|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        81 ~~~~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil  140 (309)
T cd07845          81 DSIFLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLL  140 (309)
T ss_pred             CeEEEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            678999999975 8988887642  3589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.79  E-value=9.9e-19  Score=157.58  Aligned_cols=133  Identities=20%  Similarity=0.232  Sum_probs=114.2

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ..+++|...+.||+|+||.||++.+...+.     .+++|.+.........+.+|+++++.++|+||+++++++..+  +
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~   88 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGK-----EVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVG--D   88 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCc-----EEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEEC--C
Confidence            345667778999999999999999975443     277777764443567789999999999999999999999885  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++|+||+++++|.+++....  ..+++..++.++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~  148 (286)
T cd06614          89 ELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNIL  148 (286)
T ss_pred             EEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEE
Confidence            8999999999999999998753  2599999999999999999999994   7999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.79  E-value=1.2e-18  Score=157.69  Aligned_cols=130  Identities=15%  Similarity=0.170  Sum_probs=107.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|.||.||+|.+..++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++.+.  +
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~   74 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNE-----TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE--K   74 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCc-----EEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC--C
Confidence            467888999999999999999876654     2777776532   22345688999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.   +|+||||+|+||.
T Consensus        75 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nil  134 (294)
T PLN00009         75 RLYLVFEYLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLL  134 (294)
T ss_pred             eEEEEEeccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEE
Confidence            8999999996 58888886543 22468888899999999999999995   6999999999984

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.79  E-value=9.1e-19  Score=162.60  Aligned_cols=141  Identities=12%  Similarity=0.134  Sum_probs=115.0

Q ss_pred             cccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcc
Q 021173          163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLC  239 (316)
Q Consensus       163 ~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv  239 (316)
                      +....+++....++|...+.||+|+||.||++.+..++.     .+++|.+...   ....+.+.+|+.++.+++|+||+
T Consensus         5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv   79 (345)
T cd07877           5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGL-----RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI   79 (345)
T ss_pred             hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCe-----EEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccc
Confidence            345566777788999999999999999999999876554     3788877632   22345688999999999999999


Q ss_pred             eeeeEEEcCC----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          240 KLLGFHARDG----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       240 ~l~g~~~~~~----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      ++++++....    ....+++++++ +++|.+++...    .+++..+..++.|++.||.|||+.   +|+||||||+||
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NI  151 (345)
T cd07877          80 GLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNL  151 (345)
T ss_pred             ceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHE
Confidence            9999886421    24478888877 78999888654    389999999999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      .
T Consensus       152 l  152 (345)
T cd07877         152 A  152 (345)
T ss_pred             E
Confidence            4

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.79  E-value=3.8e-19  Score=161.66  Aligned_cols=123  Identities=17%  Similarity=0.195  Sum_probs=104.5

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ...||+|+||.||++....++.     .+++|.+.. .....+.+.+|+.++..++|+||+++++++..+  +..++|||
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~--~~~~iv~e   98 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGR-----QVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG--EELWVLME   98 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCC-----EEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeC--CeEEEEEe
Confidence            3679999999999999875543     377777653 233446688999999999999999999998874  88999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++++|..++...    .+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        99 ~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nil  149 (297)
T cd06659          99 FLQGGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSIL  149 (297)
T ss_pred             cCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeE
Confidence            99999999988653    489999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.79  E-value=3.8e-19  Score=159.92  Aligned_cols=127  Identities=17%  Similarity=0.209  Sum_probs=105.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++.+.  +..
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~-----~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--~~~   74 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD--KKL   74 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCc-----EEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC--Cce
Confidence            6667899999999999999976654     2677766522   22335678899999999999999999998874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|+||+. ++|.+++....  ..+++..++.++.||++||.|||+.   +|+||||||+||.
T Consensus        75 ~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil  131 (284)
T cd07839          75 TLVFEYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLL  131 (284)
T ss_pred             EEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEE
Confidence            99999997 58888877543  2489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=1.9e-19  Score=172.07  Aligned_cols=127  Identities=19%  Similarity=0.274  Sum_probs=111.2

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ++||+|.||.|++|.|.....  +.+.||||.+..+.  .....|++|+.+|.+|+|+|+|+|||...+   ...+||||
T Consensus       116 e~LG~GsFgvV~rg~Wt~psg--k~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~---qp~mMV~E  190 (1039)
T KOG0199|consen  116 ELLGEGSFGVVKRGTWTQPSG--KHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD---QPAMMVFE  190 (1039)
T ss_pred             HHhcCcceeeEeeccccCCCC--cEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc---chhhHHhh
Confidence            899999999999999976432  45679999998533  356789999999999999999999999987   77899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++.|+|.+.|+... ...|.......|+.|||.||.||..   +++|||||-..||+
T Consensus       191 LaplGSLldrLrka~-~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNll  244 (1039)
T KOG0199|consen  191 LAPLGSLLDRLRKAK-KAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLL  244 (1039)
T ss_pred             hcccchHHHHHhhcc-ccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhhe
Confidence            999999999999833 4468888899999999999999999   47999999999985

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.79  E-value=1e-18  Score=159.41  Aligned_cols=131  Identities=16%  Similarity=0.242  Sum_probs=106.9

Q ss_pred             CCCcceeeecCceEEEEEEECC--CCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~--~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      |...+.||+|+||.||+|.+..  .+.     .+++|.+...    ......+.+|+.++..++|+||+++++++.+...
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~-----~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGK-----EYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHAD   76 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCC-----eEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCC
Confidence            6667899999999999999876  333     3788877642    2234567899999999999999999999988544


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD--GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~--~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.++|||||+.+ +|.+++.....  ...+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil  140 (316)
T cd07842          77 KSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANIL  140 (316)
T ss_pred             ceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEE
Confidence            789999999975 77777654321  23589999999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.79  E-value=6.1e-19  Score=156.70  Aligned_cols=130  Identities=18%  Similarity=0.213  Sum_probs=110.8

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+...  .....++.+|+++++.++|+||+++++++..+  +..
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~   74 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGK-----IMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNN--GDI   74 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCc-----EEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecC--CEE
Confidence            56667899999999999999986554     2777776532  34556799999999999999999999999884  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||+||+.+++|.+++....  ..+++..+..++.|++.||.|||+.  .+|+|+||||+||.
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~  133 (265)
T cd06605          75 SICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNIL  133 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEE
Confidence            99999999999999998652  3589999999999999999999992  26999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=7.2e-20  Score=177.53  Aligned_cols=130  Identities=20%  Similarity=0.299  Sum_probs=111.8

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ..+++||+|+||+||+|.|-..++ ..++.|++|.+..  ..+...+|+.|+.+|.+|+|+||++|+|+|..   ..+.|
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege-~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~---s~~ql  774 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGE-NVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML---STLQL  774 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCc-eecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc---chHHH
Confidence            345899999999999999965543 3445688888763  44557889999999999999999999999997   55999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |++||++|+|.++++....  .+.....+.|..|||+||.|||.   .+++||||-..||+
T Consensus       775 vtq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVL  830 (1177)
T KOG1025|consen  775 VTQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVL  830 (1177)
T ss_pred             HHHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhhee
Confidence            9999999999999998643  58888999999999999999998   47999999999985

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.79  E-value=1.7e-18  Score=154.64  Aligned_cols=135  Identities=21%  Similarity=0.340  Sum_probs=105.0

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC---
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~---  250 (316)
                      |...+.||+|+||.||+|.+.......  ..+++|.+..   .....+++.+|+.+++.++|+||+++++++.....   
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   78 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSF--QKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGR   78 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCc--eEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCc
Confidence            455688999999999999875422100  2378887763   23445678999999999999999999998865311   


Q ss_pred             -CeEEEEEecCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 -DQRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 -~~~~lV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ...++++||+.+|+|.+++....   ....+++..++.++.|++.||+|||+.   +|+||||||+||+
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nil  145 (273)
T cd05074          79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCM  145 (273)
T ss_pred             ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEE
Confidence             13478999999999998875421   123478999999999999999999995   6999999999984

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.79  E-value=4.9e-20  Score=159.25  Aligned_cols=131  Identities=14%  Similarity=0.208  Sum_probs=109.9

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------C---chhhHhHHHHHHHHHhCC-CCCcceee
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------S---SQGVKEFINDVNTLASLQ-HPNLCKLL  242 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~---~~~~~~~~~E~~~l~~l~-HpnIv~l~  242 (316)
                      ..+.|...+.||.|..+.|-+|..+.++..     .++|++..      .   ....+.-..|+.||+++. ||+|++|.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e-----~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~   89 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKE-----FAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ   89 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccc-----eeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence            345677789999999999999988776652     55555531      1   122455778999999995 99999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|..+  ..+++|+|.|+.|.|+|+|...-   .+++.....|+.|+..|+.|||.   .+||||||||+||+
T Consensus        90 D~yes~--sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENIL  155 (411)
T KOG0599|consen   90 DVYESD--AFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENIL  155 (411)
T ss_pred             eeccCc--chhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhhee
Confidence            999884  78999999999999999999865   59999999999999999999999   47999999999995

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.79  E-value=1.9e-18  Score=152.06  Aligned_cols=130  Identities=18%  Similarity=0.248  Sum_probs=111.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|++|.||+|....++.     .+++|.+....   ...+.+.+|+.++++++|+||+++++++.....+.
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGE-----LMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNT   75 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCc-----EEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCe
Confidence            36677999999999999999986553     37777765433   45678999999999999999999999998732368


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+++|.+++....   .+++..+..++.|++.||.|||+.   +++|+||+|+||.
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~  133 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANIL  133 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            999999999999999998754   599999999999999999999994   6999999999984

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.79  E-value=1.2e-18  Score=161.73  Aligned_cols=132  Identities=14%  Similarity=0.161  Sum_probs=108.8

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ...++|...+.||+|+||.||++....++.     .+++|.+...   ......+.+|+.+|+.++|+||+++++++..+
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGA-----KVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPD   86 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCc-----EEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCC
Confidence            356779889999999999999999876654     3788877532   22345688999999999999999999988764


Q ss_pred             CC----CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GS----DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~----~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..    ...++||||+ +++|.+++...    .+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        87 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nil  150 (343)
T cd07880          87 LSLDRFHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLA  150 (343)
T ss_pred             ccccccceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            21    2468999999 77999888653    489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.79  E-value=1.1e-18  Score=155.74  Aligned_cols=132  Identities=11%  Similarity=0.213  Sum_probs=105.5

Q ss_pred             CCCCcceeeecCceEEEEEEECC-CCceeEEEEEeeeecCC-----------CchhhHhHHHHHHHHHh-CCCCCcceee
Q 021173          176 NFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNP-----------SSQGVKEFINDVNTLAS-LQHPNLCKLL  242 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~-----------~~~~~~~~~~E~~~l~~-l~HpnIv~l~  242 (316)
                      +|...+.||+|+||.||+|.+.. ++.     .+++|.+..           ......++..|+.++.+ ++|+||++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~-----~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~   75 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQN-----LLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYY   75 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCc-----eeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEE
Confidence            46677899999999999999877 332     256665431           12234567889988875 7899999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++..+  +..++||||+++++|.+++... .....+++..++.++.|++.||.|||+.  .+|+|+||+|+||.
T Consensus        76 ~~~~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil  146 (269)
T cd08528          76 KTFLEN--DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIM  146 (269)
T ss_pred             eeEccC--CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEE
Confidence            999874  8899999999999999988542 1234589999999999999999999964  36999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.79  E-value=5.8e-19  Score=157.84  Aligned_cols=129  Identities=20%  Similarity=0.197  Sum_probs=110.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..    .......+.+|+.++++++ |+||+++++++... 
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-   74 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNK-----EYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-   74 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCC-----EEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-
Confidence            467888999999999999999976554     267776653    2334467889999999998 99999999988774 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+.+++|.+++....   .+++..++.|+.|++.||.|||+.   +++|+||+|+||.
T Consensus        75 -~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~  134 (280)
T cd05581          75 -ENLYFVLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENIL  134 (280)
T ss_pred             -ceEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeE
Confidence             78999999999999999998753   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.78  E-value=1.1e-18  Score=157.05  Aligned_cols=122  Identities=16%  Similarity=0.109  Sum_probs=97.3

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHh---CCCCCcceeeeEEEcCCCCeEE
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLAS---LQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~---l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      .||+|+||.||++.+..++.     .+++|.+...    ......+.+|..++..   .+|+||+.+++++..+  +..+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~   73 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP--DKLC   73 (279)
T ss_pred             CcccCCCeEEEEEEECCCCc-----EEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC--CeEE
Confidence            48999999999999876654     2677766422    1222334555544444   4799999999988874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++....   .+++..+..|+.|++.||+|||+.   +|+||||||+||+
T Consensus        74 lv~e~~~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil  129 (279)
T cd05633          74 FILDLMNGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANIL  129 (279)
T ss_pred             EEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEE
Confidence            9999999999999987653   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.78  E-value=1.2e-18  Score=157.40  Aligned_cols=128  Identities=15%  Similarity=0.112  Sum_probs=105.9

Q ss_pred             CCCCcceeeecCceEEEEEEECC---CCceeEEEEEeeeecCCC-----chhhHhHHHHHHHHHhC-CCCCcceeeeEEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGD---DASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASL-QHPNLCKLLGFHA  246 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~---~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~  246 (316)
                      +|...+.||+|+||.||++....   ++.     .+++|.+...     ....+.+.+|+.++..+ +|+||+.+++++.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~-----~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGK-----LYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCc-----eEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee
Confidence            46677899999999999998743   222     2777776532     22346688999999999 5999999998887


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+  ...++||||+++++|.++|....   .+++..+..++.|++.||.|||+.   +|+||||+|+||+
T Consensus        76 ~~--~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil  137 (290)
T cd05613          76 TD--TKLHLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENIL  137 (290)
T ss_pred             cC--CeEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeE
Confidence            74  78899999999999999998653   488999999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=2.6e-18  Score=151.34  Aligned_cols=128  Identities=23%  Similarity=0.344  Sum_probs=110.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++.+...+.     .+++|.+....   .....+.+|++++++++|+|++++++++.+.  +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   73 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGD-----FVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS--DS   73 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCc-----EEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC--CE
Confidence            36677999999999999999876554     27777776432   4567799999999999999999999998874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+++|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~  131 (254)
T cd06627          74 LYIILEYAENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANIL  131 (254)
T ss_pred             EEEEEecCCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEE
Confidence            999999999999999998753   589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.78  E-value=9.3e-19  Score=157.42  Aligned_cols=128  Identities=14%  Similarity=0.168  Sum_probs=108.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||+|.+..++.     .+++|.+..   .....+.+.+|+++++.++|+||+++++++...  +.
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~-----~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   74 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGE-----IVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRK--GR   74 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCc-----EEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEEC--CE
Confidence            57778999999999999999987654     378887753   233456789999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.++.|..++....   .+++..+..++.||+.||.|||+.   +|+|+||+|+||.
T Consensus        75 ~~iv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~  132 (288)
T cd07833          75 LYLVFEYVERTLLELLEASPG---GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENIL  132 (288)
T ss_pred             EEEEEecCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence            999999999877766655432   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.78  E-value=1.1e-18  Score=158.18  Aligned_cols=134  Identities=16%  Similarity=0.160  Sum_probs=109.0

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+++++.++|+||+++++++.+.
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~   78 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGE-----LVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDK   78 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCc-----EEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence            456778889999999999999999987654     2667766522   22334678899999999999999999998763


Q ss_pred             C--------CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 G--------SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~--------~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .        .+.++|||||+.+ +|..++....  ..+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nil  148 (302)
T cd07864          79 QDALDFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNIL  148 (302)
T ss_pred             chhhhccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            1        2378999999986 7877776542  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.78  E-value=2.3e-18  Score=155.43  Aligned_cols=126  Identities=19%  Similarity=0.250  Sum_probs=106.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      |...+.||+|++|.||++....++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++...  +..++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~--~~~~~   93 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGR-----QVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG--DELWV   93 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCC-----EEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcC--CeEEE
Confidence            4444899999999999999876554     267776653 233455688999999999999999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+||+.+++|.+++...    .+++..+..++.|++.||.|||+.   +|+||||+|+||.
T Consensus        94 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil  147 (285)
T cd06648          94 VMEFLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSIL  147 (285)
T ss_pred             EEeccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEE
Confidence            99999999999998873    489999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.78  E-value=9.1e-19  Score=161.85  Aligned_cols=130  Identities=15%  Similarity=0.227  Sum_probs=108.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.+++++ +|+||++++++|...+
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~   80 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKE-----VVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN   80 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCe-----EEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC
Confidence            4567778999999999999999876554     267776642   233445678899999999 9999999999987654


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....+|||||+. ++|..++...    .++|..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        81 ~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nil  139 (337)
T cd07852          81 DKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNIL  139 (337)
T ss_pred             CceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            457899999997 5999988764    489999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.78  E-value=1.2e-18  Score=160.79  Aligned_cols=134  Identities=15%  Similarity=0.192  Sum_probs=110.8

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFH  245 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~  245 (316)
                      ++...+++|...+.||.|+||.||++....++.     .+++|.+..   .....+.+..|+++++.++|+||++++++|
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~   78 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQ-----NVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIF   78 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCC-----EEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeE
Confidence            344567889999999999999999999876654     277776642   223346688999999999999999999988


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ... .+..++||||+ +++|.+++...    .+++..+..++.|++.||.|||+.   +|+||||+|+||+
T Consensus        79 ~~~-~~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nil  140 (328)
T cd07856          79 ISP-LEDIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNIL  140 (328)
T ss_pred             ecC-CCcEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEe
Confidence            764 36789999998 56899888753    388888899999999999999994   6999999999984

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.78  E-value=1.2e-18  Score=161.06  Aligned_cols=130  Identities=13%  Similarity=0.212  Sum_probs=108.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC--
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--  249 (316)
                      +++|...+.||+|+||.||+|.+..++.     .|++|.+..  .......+.+|+.+++.++|+||+++++++....  
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   78 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGV-----KVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE   78 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCC-----eEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence            4678889999999999999999876654     378887753  2334566889999999999999999999876531  


Q ss_pred             -CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ....++||||+.+ +|.+++...    .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        79 ~~~~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nil  138 (336)
T cd07849          79 SFNDVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLL  138 (336)
T ss_pred             ccceEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEE
Confidence             2458999999975 898888654    499999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.78  E-value=1.6e-18  Score=154.05  Aligned_cols=121  Identities=13%  Similarity=0.163  Sum_probs=103.7

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||.|+||.||++.+..++.     .+++|.+..    .....+.+.+|+.+++.++|+||+++++++.+.  +..++|||
T Consensus         1 lg~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e   73 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNR-----TFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK--KYIYMLME   73 (262)
T ss_pred             CCCCCceEEEEEEECCCCc-----EEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC--CccEEEEe
Confidence            6899999999999986544     277776653    223446799999999999999999999998874  78999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++++|.+++....   .+++..+..++.|++.||.|||++   +++|+||+|+||.
T Consensus        74 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nil  125 (262)
T cd05572          74 YCLGGELWTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLL  125 (262)
T ss_pred             cCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEE
Confidence            999999999998753   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.78  E-value=9.6e-19  Score=154.88  Aligned_cols=121  Identities=17%  Similarity=0.192  Sum_probs=104.5

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||.|+||.||++.+..++.     .+++|.+....    ...+.+.+|++++++++|+||+++++.+..  .+..|+|||
T Consensus         1 lg~g~~~~vy~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e   73 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGD-----IYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVME   73 (265)
T ss_pred             CCCCCceEEEEEEECCCCC-----EEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEe
Confidence            6899999999999986554     37788775322    345678999999999999999999998876  488999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+++|.+++....   .+++..++.++.||+.||.|||+.   +|+|+||+|+||.
T Consensus        74 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil  125 (265)
T cd05579          74 YLPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNIL  125 (265)
T ss_pred             cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeE
Confidence            999999999998753   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.78  E-value=1.3e-18  Score=170.12  Aligned_cols=140  Identities=20%  Similarity=0.250  Sum_probs=120.6

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEE
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHA  246 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~  246 (316)
                      +.+..-++-|.+.+.||.|.+|.||+++....+..     +|+|++.......++...|.++|+.+. |||++.++|++.
T Consensus        12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~-----aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~   86 (953)
T KOG0587|consen   12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQL-----AAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFI   86 (953)
T ss_pred             hhCCCCCCccEEEEEEeeccceeEEEEeeeecCce-----eeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence            33344556678889999999999999998776652     788888877777888899999999985 999999999987


Q ss_pred             cC---CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RD---GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~---~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..   ..+.+|||||||.+|+.-|+++... +..+.|..+..|+++++.||.+||.+   .+||||||-.||+
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiL  155 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVL  155 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEE
Confidence            52   2589999999999999999998865 66799999999999999999999995   6999999999985

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.78  E-value=2.4e-18  Score=156.96  Aligned_cols=129  Identities=22%  Similarity=0.271  Sum_probs=106.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..|...+.||+|+||.||+|.+..++.     .+++|.+..    .....+.+.+|+.+++.++|+||++++++|.+.  
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~--   87 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNE-----VVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE--   87 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCc-----EEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC--
Confidence            347777999999999999999876554     267776642    223446789999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+. |+|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||+|+||.
T Consensus        88 ~~~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl  147 (307)
T cd06607          88 HTAWLVMEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNIL  147 (307)
T ss_pred             CeEEEEHHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEE
Confidence            78999999997 57877776432  2589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.78  E-value=3.2e-18  Score=156.97  Aligned_cols=127  Identities=23%  Similarity=0.286  Sum_probs=105.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||++.+..++.     .+++|.+..    .......+.+|+++++.++|+|++++++++.++  +.
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~-----~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~   99 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNE-----VVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE--HT   99 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCc-----EEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC--Ce
Confidence            5566889999999999999876654     267776642    223345788999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+. |+|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||+|+||+
T Consensus       100 ~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil  157 (317)
T cd06635         100 AWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNIL  157 (317)
T ss_pred             EEEEEeCCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEE
Confidence            999999997 48888776542  2589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.78  E-value=2.4e-18  Score=154.23  Aligned_cols=129  Identities=17%  Similarity=0.190  Sum_probs=104.3

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|+||.||+|....++.     .+++|.+...  ........+|+.++.++. |+||+++++++.+...+..
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~-----~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~   75 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGK-----YYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRL   75 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCc-----EEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcE
Confidence            4456889999999999999876554     2777776532  222234567999999996 9999999999987434789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+. |+|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        76 ~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~  132 (282)
T cd07831          76 ALVFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENIL  132 (282)
T ss_pred             EEEEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEE
Confidence            99999997 58888887643  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=7.9e-19  Score=167.81  Aligned_cols=124  Identities=19%  Similarity=0.278  Sum_probs=108.2

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecC-CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      -+||+|.||+||-|++.++..     .++||.+. ......+-+..|+.+-+.|+|.|||+++|.|.++  +++-|.||-
T Consensus       581 vVLGKGTYG~VYA~RD~~tqv-----rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~sen--Gf~kIFMEq  653 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQV-----RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSEN--GFFKIFMEQ  653 (1226)
T ss_pred             EEeecCceeEEEeecccccee-----EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCC--CeEEEEeec
Confidence            469999999999999998875     48888886 3455566688999999999999999999998875  788899999


Q ss_pred             CCCCCHHHHHhcCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPI--DWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l--~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||+|.++|+..=+  ++  .+.+.-.+..||++||.|||++   .|||||||-+||+
T Consensus       654 VPGGSLSsLLrskWG--PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVL  707 (1226)
T KOG4279|consen  654 VPGGSLSSLLRSKWG--PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVL  707 (1226)
T ss_pred             CCCCcHHHHHHhccC--CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEE
Confidence            999999999998632  45  7788888999999999999995   7999999999984

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.77  E-value=5.4e-18  Score=148.56  Aligned_cols=129  Identities=20%  Similarity=0.275  Sum_probs=111.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+.... .....+.+|+++++.++|+||+++++++..+  +..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~~   73 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGK-----EVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKK--DELW   73 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCc-----EEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--CeEE
Confidence            46677899999999999999976543     37778776433 3567899999999999999999999998874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++||+.+++|.+++....  ..+++..+..++.|++.||.|||..   +++|+||+|+||.
T Consensus        74 l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~  130 (253)
T cd05122          74 IVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANIL  130 (253)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEE
Confidence            9999999999999998752  3589999999999999999999994   7999999999984

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.77  E-value=2.6e-18  Score=159.43  Aligned_cols=121  Identities=12%  Similarity=0.023  Sum_probs=91.9

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECC-CCceeEEEEEeeeecCCC------chhhHhHHHHHHHHHhCCCCCcceeeeEE
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNPS------SQGVKEFINDVNTLASLQHPNLCKLLGFH  245 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~  245 (316)
                      ..++|...+.||+|+||+||+|.+.. ++.     .+++|.+...      ......|.+|+++|..++|+|++..+..+
T Consensus        16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~   90 (365)
T PRK09188         16 LSARFVETAVLKRDVFSTVERGYFAGDPGT-----ARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT   90 (365)
T ss_pred             ccCCceEccEEeecCcEEEEEEEEcCCCCe-----EEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence            44678889999999999999998865 333     2577765421      22345699999999999999998533221


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecc-CCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYF-EMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDl-Kp~NI~  316 (316)
                           +..||||||++|++|.. +..      ..   ...++.+++.||.|||+.   +|+|||| ||+||+
T Consensus        91 -----~~~~LVmE~~~G~~L~~-~~~------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NIL  144 (365)
T PRK09188         91 -----GKDGLVRGWTEGVPLHL-ARP------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWL  144 (365)
T ss_pred             -----CCcEEEEEccCCCCHHH-hCc------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEE
Confidence                 45799999999999973 211      11   146788999999999995   7999999 999984

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.77  E-value=2.1e-18  Score=156.48  Aligned_cols=122  Identities=18%  Similarity=0.231  Sum_probs=105.0

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      ..||+|+||.||++....++.     .+++|.+.. .......+.+|+.+++.++|+||+++++++...  +..++||||
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~-----~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~lv~e~   98 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGK-----LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DELWVVMEF   98 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCe-----EEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeC--CEEEEEEec
Confidence            679999999999999876654     377777653 334456689999999999999999999999874  899999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++|.+++...    .+++.....++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        99 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nil  148 (292)
T cd06657          99 LEGGALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSIL  148 (292)
T ss_pred             CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            9999999987643    389999999999999999999995   6999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PRK10345 hypothetical protein; Provisional

Probab=99.77  E-value=2.6e-18  Score=148.15  Aligned_cols=122  Identities=13%  Similarity=0.097  Sum_probs=92.2

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhC-----CCCCcceeeeEEEcCCC-
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASL-----QHPNLCKLLGFHARDGS-  250 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l-----~HpnIv~l~g~~~~~~~-  250 (316)
                      .....||+|+||.||.  ......      .+||.+.. .....+.+.+|+.+++.+     .|+||++++|++.++.+ 
T Consensus         5 ~~~~~LG~G~~~~Vy~--hp~~~~------k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~   76 (210)
T PRK10345          5 SEQSPLGTGRHRKCYA--HPEDAQ------RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT   76 (210)
T ss_pred             CCcceecCCCceEEEE--CCCCcC------eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence            3458999999999995  433332      23555542 233456799999999999     57999999999988532 


Q ss_pred             Ce-EEEEEec--CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQ-RMLIYER--LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL-TFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~-~~lV~Ey--~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL-~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +. +.+||||  +.+|+|.+++...    .+++.  ..++.+++.++ +|||++   +||||||||+||+
T Consensus        77 g~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NIL  137 (210)
T PRK10345         77 GYVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNIL  137 (210)
T ss_pred             eEEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEE
Confidence            33 3478999  5579999999653    26655  35678888888 999995   6999999999984

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.77  E-value=3.1e-18  Score=155.69  Aligned_cols=132  Identities=13%  Similarity=0.195  Sum_probs=106.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|....++.     .+++|.+...   ......+.+|+.++++++|+||++++++|...+ 
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~-----~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   85 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQ-----IVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT   85 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCc-----EEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence            3568888999999999999999877654     3777766421   222345678999999999999999999987632 


Q ss_pred             -----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                           ....++||||+.+ +|.+++....  ..+++.+++.++.||+.||.|||++   +|+|+||||+||+
T Consensus        86 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil  151 (310)
T cd07865          86 PYNRYKGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANIL  151 (310)
T ss_pred             cccCCCceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence                 2456999999965 8888887643  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.77  E-value=4.2e-19  Score=162.66  Aligned_cols=132  Identities=17%  Similarity=0.196  Sum_probs=114.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      -+.|..-++||+|+||.||-|..+.++..     +|.|.+.+    ...+...-++|-.+|.+++.+.||.|--.|.+  
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKM-----YAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeT--  256 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKM-----YACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFET--  256 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhh-----HHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecC--
Confidence            35688889999999999999999988863     77777763    33444557899999999999999999766666  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.++|||..|.||||.-+|...+ +..|++..++.++.+|+.||++||+.   .||+|||||+||+
T Consensus       257 kd~LClVLtlMNGGDLkfHiyn~g-~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNIL  319 (591)
T KOG0986|consen  257 KDALCLVLTLMNGGDLKFHIYNHG-NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENIL  319 (591)
T ss_pred             CCceEEEEEeecCCceeEEeeccC-CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhhee
Confidence            599999999999999999988765 45699999999999999999999994   7999999999996

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.77  E-value=6e-18  Score=149.02  Aligned_cols=131  Identities=17%  Similarity=0.232  Sum_probs=111.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||.|+||.||++.+..++.     .+++|.+...   ......+.+|+++++.++|+|++++++.+...  +.
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~   73 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGK-----LYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK--GK   73 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCc-----EEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC--CE
Confidence            46677899999999999999986554     3777777532   24566789999999999999999999998874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++.... .+..+++..+..++.+++.||.|||+.   +|+|+||+|+||.
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil  135 (258)
T cd08215          74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIF  135 (258)
T ss_pred             EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeE
Confidence            999999999999999998742 124699999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.77  E-value=3.8e-18  Score=153.08  Aligned_cols=129  Identities=16%  Similarity=0.213  Sum_probs=107.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|+||.||+|.+.+++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++.....+..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGE-----LVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCe-----EEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcE
Confidence            4556889999999999999987654     3777877643   2334568899999999999999999999987433689


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+ +|.+++....  ..+++..++.++.||+.||.|||+.   +++|+||||+||.
T Consensus        76 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil  132 (287)
T cd07840          76 YMVFEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNIL  132 (287)
T ss_pred             EEEeccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeE
Confidence            999999975 8998887652  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.77  E-value=3.1e-18  Score=153.91  Aligned_cols=128  Identities=18%  Similarity=0.222  Sum_probs=106.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||.|++|.||+|.+..++.     .+++|.+...   ......+.+|+++++.++|+||+++++++.+.  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~--~~~   73 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGE-----IVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE--NKL   73 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCC-----EEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC--CeE
Confidence            4556899999999999999876554     3677776532   22335688999999999999999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+. ++|.+++.... ...+++..++.++.|++.||.|||+.   +|+||||+|+||.
T Consensus        74 ~iv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil  131 (283)
T cd07835          74 YLVFEFLD-LDLKKYMDSSP-LTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLL  131 (283)
T ss_pred             EEEEeccC-cCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEE
Confidence            99999995 69999987654 23589999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.77  E-value=6.1e-18  Score=151.35  Aligned_cols=133  Identities=14%  Similarity=0.083  Sum_probs=103.3

Q ss_pred             HHHHHHHhCCCCCccee--eecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeee
Q 021173          167 LDEVAAACHNFFSDRCI--SEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG  243 (316)
Q Consensus       167 ~~ei~~~t~~f~~~~~I--G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g  243 (316)
                      ..++....++|...+.+  |+|+||.||++....++..     +++|.+......  .  .|+.+...+ +|+||+++++
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~-----~~~k~~~~~~~~--~--~e~~~~~~~~~h~~iv~~~~   76 (267)
T PHA03390          6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKL-----FVQKIIKAKNFN--A--IEPMVHQLMKDNPNFIKLYY   76 (267)
T ss_pred             HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcE-----EEEEEEehhhcc--h--hhHHHHHHhhcCCCEEEEEE
Confidence            34555556677776666  9999999999998776652     666665422111  1  123223223 6999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++..+  +..++||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~~~--~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil  141 (267)
T PHA03390         77 SVTTL--KGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVL  141 (267)
T ss_pred             EEecC--CeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEE
Confidence            99885  78999999999999999998753   599999999999999999999995   6999999999984

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.77  E-value=1.7e-18  Score=153.63  Aligned_cols=133  Identities=12%  Similarity=0.168  Sum_probs=104.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC---CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|+||.||++.+.........  ..+|.+.   ........+..|+.+++.++|+||+++++++.+.  +..
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~   77 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERL--KVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER--DAF   77 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceE--EEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC--Cce
Confidence            66778999999999999988765431111  1222222   1223344577899999999999999999998874  779


Q ss_pred             EEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+++|.+++.... ....+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        78 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nil  138 (260)
T cd08222          78 CIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIF  138 (260)
T ss_pred             EEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheE
Confidence            99999999999999887521 234699999999999999999999994   7999999999983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.77  E-value=2.1e-18  Score=157.55  Aligned_cols=123  Identities=15%  Similarity=0.171  Sum_probs=98.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.+|.|+++.||++..  ++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++.++  +..+++|
T Consensus         8 ~~~~~~~~v~~~~~~~--~~~-----~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~--~~~~~~~   78 (314)
T cd08216           8 KCFEDLMIVHLAKHKP--TNT-----LVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD--SELYVVS   78 (314)
T ss_pred             HhhcCCceEEEEEecC--CCC-----EEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC--CeEEEEE
Confidence            4445555555555544  332     277777653   344567799999999999999999999998874  7899999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+.+|+|.+++.... ...+++..+..++.|++.||.|||++   +|+||||||+||.
T Consensus        79 e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nil  133 (314)
T cd08216          79 PLMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHIL  133 (314)
T ss_pred             eccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEE
Confidence            9999999999998653 23588999999999999999999995   6999999999984

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.76  E-value=8.9e-19  Score=165.99  Aligned_cols=128  Identities=11%  Similarity=0.050  Sum_probs=110.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      -|...+-||-|+||.|.++...++...     +|+|.+.+.    .........|-+||...+.+.||+||-.|.+  .+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~l-----YAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQD--kd  702 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRAL-----YAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KD  702 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhH-----HHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEecc--CC
Confidence            355567899999999999998887653     888888642    2334457789999999999999999988877  49


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|+||+|++||++..+|...+   .|.+..+..++.++.+|++++|.   +++|||||||+||+
T Consensus       703 nLYFVMdYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNIL  761 (1034)
T KOG0608|consen  703 NLYFVMDYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNIL  761 (1034)
T ss_pred             ceEEEEeccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceE
Confidence            9999999999999999998865   69999999999999999999999   57999999999996

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.76  E-value=2.5e-18  Score=154.39  Aligned_cols=128  Identities=19%  Similarity=0.291  Sum_probs=106.8

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|+||.||+|.+.+++.     .+++|.+.....  ......+|+..+.+++ |+||+++++++.++  +..
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~--~~~   73 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGE-----LVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREN--DEL   73 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCc-----EEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcC--CcE
Confidence            4556899999999999999977654     377887753322  2334567999999999 99999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+ +|+|.+++.... +..+++..++.++.|++.||.|||++   +|+|+||+|+||.
T Consensus        74 ~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~  131 (283)
T cd07830          74 YFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLL  131 (283)
T ss_pred             EEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEE
Confidence            9999999 889999988754 33589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.76  E-value=4.4e-18  Score=158.41  Aligned_cols=130  Identities=14%  Similarity=0.159  Sum_probs=107.5

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..+.|...+.||+|+||.||++....++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++....
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   88 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQ-----NVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK   88 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCC-----EEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence            44678888999999999999999876654     378887753   2334456789999999999999999999886531


Q ss_pred             ----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ....||||||+. ++|.+.+...     +++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        89 ~~~~~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil  150 (353)
T cd07850          89 SLEEFQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  150 (353)
T ss_pred             CccccCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEE
Confidence                245799999996 4888887642     88899999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.76  E-value=2.4e-18  Score=155.18  Aligned_cols=131  Identities=15%  Similarity=0.125  Sum_probs=105.2

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      +|...+.||+|+||.||++.........  ..+++|.+...     ....+.+.+|+.++.++ +|+||+.+++.+... 
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~--~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~-   77 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAG--KLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD-   77 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCC--cEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC-
Confidence            3667789999999999999864322100  12667766421     22345688999999999 599999999888764 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        78 -~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil  137 (288)
T cd05583          78 -TKLHLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENIL  137 (288)
T ss_pred             -CEEEEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeE
Confidence             78999999999999999987643   489999999999999999999994   7999999999984

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.76  E-value=3.7e-18  Score=157.59  Aligned_cols=124  Identities=12%  Similarity=0.117  Sum_probs=102.2

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh---------------hHhHHHHHHHHHhCCCCCcceeee
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG---------------VKEFINDVNTLASLQHPNLCKLLG  243 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------~~~~~~E~~~l~~l~HpnIv~l~g  243 (316)
                      ..+.||.|+||.||+|.+...+.     .+++|.+......               ...+.+|+.+++.++|+||+++++
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGK-----IVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCC-----eEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            34789999999999999876554     2666665421111               124789999999999999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++..+  +..++||||+. |+|.+++....   .+++.....++.|++.||.|||+.   +|+|+||||+||+
T Consensus        88 ~~~~~--~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nil  151 (335)
T PTZ00024         88 VYVEG--DFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIF  151 (335)
T ss_pred             EEecC--CcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeE
Confidence            99874  88999999997 69999987643   489999999999999999999995   6999999999984

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.76  E-value=1.8e-18  Score=160.31  Aligned_cols=129  Identities=16%  Similarity=0.266  Sum_probs=106.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC---
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS---  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~---  250 (316)
                      .+|...+.||.|+||.||+|....++..     +++|.+.. .....+.+.+|+++++.++|+||+++++++...+.   
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~-----v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKR-----VAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLT   79 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcE-----EEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccc
Confidence            5688889999999999999999776642     67776642 33445678899999999999999999987665321   


Q ss_pred             ---------CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 ---------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ---------~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                               ...++||||+. ++|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        80 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nil  146 (342)
T cd07854          80 EDVGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVF  146 (342)
T ss_pred             cccccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence                     35789999997 5999888653    489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.76  E-value=2.3e-18  Score=159.05  Aligned_cols=130  Identities=12%  Similarity=0.175  Sum_probs=108.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--C
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD--G  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~  249 (316)
                      ++|...+.||+|+||.||+|....++.     .+++|.+...   ......+.+|+.+|+.++|+||+++++++...  .
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~-----~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   79 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGK-----KVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGAD   79 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCC-----EEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCC
Confidence            678888999999999999999887664     3777877532   23456678899999999999999999987642  1


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....++||||+. |+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        80 ~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil  139 (334)
T cd07855          80 FKDVYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLL  139 (334)
T ss_pred             CceEEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            357899999995 68999887643   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.76  E-value=1e-17  Score=153.32  Aligned_cols=127  Identities=22%  Similarity=0.301  Sum_probs=105.0

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+..    .......+.+|+++++.++|+||+++++++.+.  +.
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~-----~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~   95 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNE-----VVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKE--HT   95 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCc-----EEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CE
Confidence            4445789999999999999876654     267776642    223345688999999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .|+||||+. |+|.+++....  ..+++.+++.++.|++.||.|||+.   +|+|+||+|+||+
T Consensus        96 ~~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nil  153 (313)
T cd06633          96 AWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNIL  153 (313)
T ss_pred             EEEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEE
Confidence            999999996 58888876542  2589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.76  E-value=4.9e-18  Score=152.77  Aligned_cols=122  Identities=15%  Similarity=0.105  Sum_probs=96.9

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHH---HHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVN---TLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~---~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      .||+|+||.||++....++.     .+++|.+...    ......+..|..   +++...|+||+.+++++.+.  +..+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~   73 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--DKLS   73 (278)
T ss_pred             CcccCCCeEEEEEEEecCCC-----EEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC--CEEE
Confidence            48999999999999876554     2777766532    122223444544   34445799999999988874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++....   .+++..+..|+.|++.||.|||+.   +|+||||||+||.
T Consensus        74 ~v~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nil  129 (278)
T cd05606          74 FILDLMNGGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANIL  129 (278)
T ss_pred             EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEE
Confidence            9999999999999887543   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=7.4e-18  Score=149.56  Aligned_cols=123  Identities=18%  Similarity=0.122  Sum_probs=99.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHH-HhCCCCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTL-ASLQHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l-~~l~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.||+|+||.||+|.+...+.     .+++|.+....    .....+..|..++ ...+|+||+++++++...  +..++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~~~~l   74 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGD-----YFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSK--DYLYL   74 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCC-----eEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcC--CeEEE
Confidence            568999999999999876554     27788775321    2223455565554 445899999999999874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||+.+++|.+++....   .+++..+..++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        75 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil  129 (260)
T cd05611          75 VMEYLNGGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLL  129 (260)
T ss_pred             EEeccCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence            999999999999997653   489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.76  E-value=4.3e-18  Score=150.23  Aligned_cols=131  Identities=18%  Similarity=0.246  Sum_probs=109.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++....++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++.+.  +.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~   73 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQ-----FYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG--NK   73 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCC-----EEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC--CE
Confidence            46677899999999999998876654     266776653   233456788999999999999999999988874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++.... .+..+++..++.++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~  135 (256)
T cd08530          74 LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANIL  135 (256)
T ss_pred             EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEE
Confidence            999999999999999987632 134689999999999999999999995   6999999999983

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.76  E-value=3.9e-18  Score=153.76  Aligned_cols=130  Identities=18%  Similarity=0.228  Sum_probs=103.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+.||+|+||.||++.+..++.     .+++|.+...  ......+.+|+.++.++. |+||+++++++..+  +.
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~--~~   77 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGT-----IMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE--GD   77 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCC-----EEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC--Cc
Confidence            34445889999999999999987664     3788877532  244567899999999996 99999999998874  78


Q ss_pred             EEEEEecCCCCCHHHHH---hcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLI---YGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L---~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|||+.. +|.++.   .... ...+++..+..++.|++.||+|||+.  .+|+||||||+||+
T Consensus        78 ~~~~~e~~~~-~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil  140 (288)
T cd06616          78 CWICMELMDI-SLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNIL  140 (288)
T ss_pred             EEEEEecccC-CHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEE
Confidence            8999999864 555443   2221 23589999999999999999999974  36999999999984

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.75  E-value=4.2e-18  Score=157.53  Aligned_cols=131  Identities=12%  Similarity=0.213  Sum_probs=107.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .+.|...+.||+|+||.||++....++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++.... 
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~   78 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNE-----KVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR   78 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCC-----eEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence            3568888999999999999999876654     377777653   2333456788999999999999999999886531 


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ....+|||||+. ++|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        79 ~~~~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil  140 (337)
T cd07858          79 EAFNDVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLL  140 (337)
T ss_pred             cccCcEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence              135899999996 68998887643   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.75  E-value=1.8e-18  Score=162.42  Aligned_cols=128  Identities=20%  Similarity=0.169  Sum_probs=108.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHh---------HHHHHHHHHhCC---CCCcceee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE---------FINDVNTLASLQ---HPNLCKLL  242 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~---------~~~E~~~l~~l~---HpnIv~l~  242 (316)
                      .+|.....+|+|+||.|++|.++....     +|.+|.+.+.+--...         .-.|++||..|+   |+||++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~-----eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL  635 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNY-----EVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL  635 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccce-----EEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence            467888999999999999999987754     4788877654433333         335999999997   99999999


Q ss_pred             eEEEcCCCCeEEEEEecC-CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          243 GFHARDGSDQRMLIYERL-FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~-~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      ++|+++  +++||+||-. ++-+|+++|..+.   .+++.++..|+.||+.|+++||+   ++|||||||-+||
T Consensus       636 dfFEdd--d~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenv  701 (772)
T KOG1152|consen  636 DFFEDD--DYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENV  701 (772)
T ss_pred             heeecC--CeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccc---cCceecccccccE
Confidence            999986  8999999965 3569999998865   49999999999999999999999   5799999999997

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.75  E-value=3.9e-19  Score=179.55  Aligned_cols=131  Identities=19%  Similarity=0.231  Sum_probs=111.6

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .+-+|..+..||.|.||.||.|...++++.     .|+|.+..   .......+.+|+.+|..|.|||||++||+-..  
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGel-----lAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH-- 1305 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGEL-----LAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH-- 1305 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccch-----hhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeec--
Confidence            345677889999999999999999888874     67776652   23445678899999999999999999999887  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.++|.||||++|+|.+++...+   ..++....-+..|++.||.|||++   +||||||||+||.
T Consensus      1306 Rekv~IFMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~ 1366 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANIL 1366 (1509)
T ss_pred             HHHHHHHHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCcccee
Confidence            488999999999999999998754   467777777889999999999996   6999999999994

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.75  E-value=9.7e-18  Score=155.48  Aligned_cols=129  Identities=14%  Similarity=0.168  Sum_probs=104.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++.... 
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGE-----KVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS   88 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCc-----EEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence            3788888999999999999999876554     3777776532   223456889999999999999999999987531 


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ....++|+||+.. +|..++..     .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        89 ~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIl  149 (342)
T cd07879          89 GDEFQDFYLVMPYMQT-DLQKIMGH-----PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLA  149 (342)
T ss_pred             CCCCceEEEEeccccc-CHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence               1356999999964 78776532     489999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.75  E-value=1.2e-17  Score=152.44  Aligned_cols=127  Identities=23%  Similarity=0.300  Sum_probs=104.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||+|.+..++..     +++|.+..    ......++.+|+++++.++|+|++++++++...  +.
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   89 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEV-----VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HT   89 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcE-----EEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC--Ce
Confidence            55558899999999999998766542     66666542    223345688999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+. |+|.+++....  ..+++.++..++.|++.||.|||+.   +|+||||||+||+
T Consensus        90 ~~lv~e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil  147 (308)
T cd06634          90 AWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNIL  147 (308)
T ss_pred             eEEEEEccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEE
Confidence            999999996 58888776542  2589999999999999999999995   6999999999984

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.75  E-value=5.4e-19  Score=149.42  Aligned_cols=127  Identities=16%  Similarity=0.184  Sum_probs=106.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|++.+.+|+|.|+.||.|....+.+     ++.||.++.  ...+.+.+|+.+|..|. |+||+.|++...+..+..
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~e-----K~ViKiLKP--VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNE-----KCVIKILKP--VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCc-----eEEEeeech--HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence            4678888999999999999998765554     367777763  34467889999999998 999999999998876788


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..||+||+.+.+...+...      |+-..+..++.+++.||+|+|+   ++|+|||+||.||.
T Consensus       110 paLiFE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvm  164 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVM  164 (338)
T ss_pred             chhHhhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceee
Confidence            8999999999888766543      5666788899999999999999   57999999999973

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.75  E-value=6.2e-18  Score=163.29  Aligned_cols=141  Identities=13%  Similarity=0.142  Sum_probs=103.3

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCce-----------eEEEEEeeeecCCCch-hh--------------HhHHHH
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDAST-----------SKKFEATVTRLNPSSQ-GV--------------KEFIND  226 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~-----------~~~~~vavK~~~~~~~-~~--------------~~~~~E  226 (316)
                      ..++|...++||+|+||.||+|.+......           .....|+||++....+ ..              +.+..|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            467899999999999999999986332210           1123488898764322 11              224457


Q ss_pred             HHHHHhCCCCCc-----ceeeeEEEcC------CCCeEEEEEecCCCCCHHHHHhcCCC---------------------
Q 021173          227 VNTLASLQHPNL-----CKLLGFHARD------GSDQRMLIYERLFHGSLDRLIYGRSD---------------------  274 (316)
Q Consensus       227 ~~~l~~l~HpnI-----v~l~g~~~~~------~~~~~~lV~Ey~~~GsL~~~L~~~~~---------------------  274 (316)
                      +.++.+++|.++     +.+++||...      ..+..||||||+.+|+|.++|+....                     
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            778888876654     6778887642      12568999999999999999875321                     


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 ~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++|..+..|+.|++.||.|||+.   +|+||||||+||+
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NIL  341 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLL  341 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEE
Confidence            11356788899999999999999994   6999999999984

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.75  E-value=6.9e-18  Score=153.44  Aligned_cols=132  Identities=14%  Similarity=0.193  Sum_probs=105.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|.+..++..     +++|.+...   ......+.+|+++++.++|+||+++++++.+.. 
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~-----~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRV-----VALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD   81 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcE-----EEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc
Confidence            46788889999999999999998766542     666766421   122345789999999999999999999876532 


Q ss_pred             -----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                           ...+++||||+.+ +|...+....  ..+++..+..++.|++.||.|||+.   +|+|+||||+||.
T Consensus        82 ~~~~~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil  147 (311)
T cd07866          82 KSKRKRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANIL  147 (311)
T ss_pred             cccccCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence                 2357999999975 7877776542  2599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.74  E-value=3.7e-18  Score=145.42  Aligned_cols=120  Identities=13%  Similarity=0.139  Sum_probs=88.0

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch---h-------hHhH-----------------HHHHHHHHhC
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ---G-------VKEF-----------------INDVNTLASL  233 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~-------~~~~-----------------~~E~~~l~~l  233 (316)
                      ..||+|+||.||+|...++..      |++|.+.....   .       ...|                 .+|+.+|.++
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~------vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   76 (190)
T cd05147           3 GCISTGKEANVYHATTANGEE------RAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL   76 (190)
T ss_pred             CccccccceEEEEEECCCCCE------EEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            689999999999999874433      77777653211   1       1122                 3499999999


Q ss_pred             CCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCcEEeccCC
Q 021173          234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL-HEEGPFQVIFYYFEM  312 (316)
Q Consensus       234 ~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yL-H~~~~~~IiHrDlKp  312 (316)
                      .++++.....+..    ...+|||||+.+++|...+....   .+++..+..++.|++.+|.|| |+.   +|+||||||
T Consensus        77 ~~~~v~~p~~~~~----~~~~iVmE~i~g~~l~~~~~~~~---~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP  146 (190)
T cd05147          77 VTAGIPCPEPILL----KSHVLVMEFIGDDGWAAPRLKDA---PLSESKARELYLQVIQIMRILYQDC---RLVHADLSE  146 (190)
T ss_pred             HHCCCCCCcEEEe----cCCEEEEEEeCCCCCcchhhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCH
Confidence            8877644333322    22389999999987765533222   489999999999999999999 574   699999999


Q ss_pred             CCCC
Q 021173          313 IKTE  316 (316)
Q Consensus       313 ~NI~  316 (316)
                      +||+
T Consensus       147 ~NIl  150 (190)
T cd05147         147 YNLL  150 (190)
T ss_pred             HHEE
Confidence            9984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.74  E-value=1.4e-17  Score=146.64  Aligned_cols=121  Identities=16%  Similarity=0.140  Sum_probs=103.5

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ||+|+||.||++.+...+.     .+++|.+...    ......+..|+.+++.++|+||+++++.+..  .+..++|||
T Consensus         1 lg~G~~~~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e   73 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGK-----LYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT--EEKLYLVLE   73 (250)
T ss_pred             CCCCCceEEEEEEECCCCc-----EEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec--CCeeEEEEe
Confidence            6899999999999876544     2677766532    2245678999999999999999999998876  488999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+.+++|.+++....   .+++..+..++.|++.||.|||+.   +++|+||+|+||.
T Consensus        74 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~  125 (250)
T cd05123          74 YAPGGELFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENIL  125 (250)
T ss_pred             cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEE
Confidence            999999999998753   489999999999999999999994   7999999999983

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1e-18  Score=159.82  Aligned_cols=131  Identities=18%  Similarity=0.188  Sum_probs=108.3

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCchh------hHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQG------VKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~------~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      .|-...+||+|+|+.||++.+-.....     ||+|+-.  +++.+      .+...+|..|-+.|+||.||++|+||.-
T Consensus       464 RYLlLhLLGrGGFSEVyKAFDl~EqRY-----vAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl  538 (775)
T KOG1151|consen  464 RYLLLHLLGRGGFSEVYKAFDLTEQRY-----VAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL  538 (775)
T ss_pred             HHHHHHHhccccHHHHHHhcccchhhe-----eeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence            344567899999999999998655542     5666543  22221      2346789999999999999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      + .+.+|-|+|||+|.+|.-+|....   .+++.++..|+.||..||.||.+..+ +|||-||||.||+
T Consensus       539 D-tdsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEikp-PIIHYDLKPgNIL  602 (775)
T KOG1151|consen  539 D-TDSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIKP-PIIHYDLKPGNIL  602 (775)
T ss_pred             c-cccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccCC-CeeeeccCCccEE
Confidence            5 488999999999999999998754   59999999999999999999999774 8999999999995

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.74  E-value=1.4e-17  Score=149.24  Aligned_cols=127  Identities=20%  Similarity=0.242  Sum_probs=106.1

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|++|.||+|....++.     .+++|.+...   ......+.+|+.+++.++|+||+++++++...  +..
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~-----~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--~~~   73 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGE-----IVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK--GDL   73 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCc-----EEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC--CCE
Confidence            4455889999999999999876554     2677766532   23356788999999999999999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+.+ +|.+++....  ..+++..++.++.|++.||.|||+.   +|+|+||||+||.
T Consensus        74 ~~v~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nil  130 (283)
T cd05118          74 YLVFEFMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLL  130 (283)
T ss_pred             EEEEeccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEE
Confidence            999999975 8988887743  2589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.73  E-value=1e-17  Score=154.17  Aligned_cols=129  Identities=16%  Similarity=0.215  Sum_probs=107.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC---
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---  249 (316)
                      +|...+.||.|+||.||+|....++.     .+++|.+...   ....+.+.+|+.+++.++|+||+++++++....   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGR-----KVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCc-----EEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccc
Confidence            36677999999999999999876554     2777777632   334567999999999999999999999987741   


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....|+||||+. ++|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        76 ~~~~~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nil  135 (330)
T cd07834          76 FNDVYIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNIL  135 (330)
T ss_pred             ccceEEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            237899999998 48999887643   599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.73  E-value=2.3e-17  Score=152.18  Aligned_cols=129  Identities=12%  Similarity=0.153  Sum_probs=104.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCC--CceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC-
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD-  248 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~--~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-  248 (316)
                      +|...+.||+|+||.||++.+...  +.     .+++|.+..   .....+.+.+|+.++.++ +|+||+++++++... 
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEE-----TVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCc-----eEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc
Confidence            366778999999999999998765  43     377777653   223356688999999999 599999999875432 


Q ss_pred             -CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 -GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 -~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ....+++++||+. ++|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        76 ~~~~~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nil  137 (332)
T cd07857          76 GNFNELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLL  137 (332)
T ss_pred             ccCCcEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeE
Confidence             2356789999886 69999987543   589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.73  E-value=8.5e-18  Score=155.94  Aligned_cols=131  Identities=12%  Similarity=0.170  Sum_probs=108.4

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.+++.++|+||+++++++...+
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGR-----KVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS   87 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCc-----EEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence            45778888999999999999999987654     377887653   2233456788999999999999999998776531


Q ss_pred             ----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ....++|+||+ +++|.+++...    .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        88 ~~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil  150 (343)
T cd07851          88 SLEDFQDVYLVTHLM-GADLNNIVKCQ----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIA  150 (343)
T ss_pred             cccccccEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence                13489999998 66999998763    499999999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.73  E-value=5e-17  Score=145.95  Aligned_cols=130  Identities=16%  Similarity=0.218  Sum_probs=102.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhC---CCCCcceeeeEEEcCCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASL---QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l---~HpnIv~l~g~~~~~~~  250 (316)
                      |...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.++.++   .|+||+++++++...+.
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   75 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGR-----FVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT   75 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCC-----EEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC
Confidence            4556899999999999999986443     3777777522   22234567788877766   59999999999987411


Q ss_pred             ---CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 ---DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ---~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ...+++|||+.+ +|.+++.... ...+++..++.++.|++.||.|||+.   +|+|+||+|+||.
T Consensus        76 ~~~~~~~l~~e~~~~-~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nil  139 (287)
T cd07838          76 DRELKLTLVFEHVDQ-DLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNIL  139 (287)
T ss_pred             CCCceeEEEehhccc-CHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEE
Confidence               138999999974 8999887643 23589999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=2.1e-18  Score=152.41  Aligned_cols=129  Identities=12%  Similarity=0.111  Sum_probs=110.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...++||+|.||+|.+|+.+.++..     +|+|++++    .......-+.|-.+|+..+||.+..|--.|..  .
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~-----YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt--~  240 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKL-----YAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT--Q  240 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCce-----eehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc--C
Confidence            4566679999999999999999887753     88898874    34455667889999999999999998766666  3


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|+||||..||.|+-+|....   .|++.....+-.+|..||.|||++   +||+||||.+|.+
T Consensus       241 drlCFVMeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLl  300 (516)
T KOG0690|consen  241 DRLCFVMEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLL  300 (516)
T ss_pred             ceEEEEEEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhhhC---Ceeeeechhhhhe
Confidence            89999999999999999888754   599999999999999999999994   7999999999974

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.72  E-value=3.1e-17  Score=148.73  Aligned_cols=130  Identities=18%  Similarity=0.274  Sum_probs=105.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...  ......+..|+.++.++. |+||+++++++.+.  .
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~   87 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGH-----VMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD--S   87 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCe-----EEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC--C
Confidence            557777999999999999999987553     3777877532  234456777888777775 99999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+. ++|.+++....  ..+++..+..++.|++.||.|||+.  .+|+||||+|+||+
T Consensus        88 ~~~~v~e~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nil  147 (296)
T cd06618          88 DVFICMELMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNIL  147 (296)
T ss_pred             eEEEEeeccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEE
Confidence            8999999985 47877776543  2689999999999999999999974  26999999999984

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.72  E-value=2.1e-17  Score=148.00  Aligned_cols=127  Identities=18%  Similarity=0.265  Sum_probs=107.2

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      |...+.||+|.||.||+|....++.     .+++|.+...   ....+.+..|+.+++.++|+||+++++++.+.  +..
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--~~~   73 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGE-----IVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE--RKL   73 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCc-----EEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC--Cce
Confidence            4455889999999999999987554     3777777642   33345688999999999999999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+. ++|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||+|+||.
T Consensus        74 ~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~  130 (282)
T cd07829          74 YLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNIL  130 (282)
T ss_pred             EEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEE
Confidence            99999998 59999998752  2599999999999999999999995   6999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.72  E-value=2.5e-17  Score=144.76  Aligned_cols=114  Identities=18%  Similarity=0.103  Sum_probs=95.6

Q ss_pred             cCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCH
Q 021173          186 GLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL  265 (316)
Q Consensus       186 G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL  265 (316)
                      |.||.||++.+..++.     .+++|.+....    .+.+|...+....|+||+++++++.+.  +..+|||||+.+|+|
T Consensus         4 g~~~~v~~~~~~~~~~-----~~~~K~i~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   72 (237)
T cd05576           4 GVIDKVLLVMDTRTQQ-----TFILKGLRKSS----EYSRERLTIIPHCVPNMVCLHKYIVSE--DSVFLVLQHAEGGKL   72 (237)
T ss_pred             cccceEEEEEEccCCc-----EEEEEeecchh----hhhhHHHHHHhcCCCceeehhhheecC--CeEEEEEecCCCCCH
Confidence            7899999999987765     38888876432    234555556666799999999998874  889999999999999


Q ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          266 DRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       266 ~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++....   .+++..+..++.|++.||+|||+.   +|+||||||+||+
T Consensus        73 ~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil  117 (237)
T cd05576          73 WSHISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNIL  117 (237)
T ss_pred             HHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEE
Confidence            99997653   489999999999999999999994   6999999999984

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.71  E-value=1.3e-17  Score=167.98  Aligned_cols=132  Identities=14%  Similarity=0.155  Sum_probs=103.9

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARD--  248 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--  248 (316)
                      -..+|....+||+|+||.||+++.+-++.     .+|||++...  ......+.+|+.+|++|+|||||+++..|.+.  
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr-----~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~  551 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGR-----EYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA  551 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccch-----hhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence            34567777899999999999999875554     3999998743  44456688999999999999999988543210  


Q ss_pred             ----------------------------------------------------C----------------------C----
Q 021173          249 ----------------------------------------------------G----------------------S----  250 (316)
Q Consensus       249 ----------------------------------------------------~----------------------~----  250 (316)
                                                                          .                      +    
T Consensus       552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S  631 (1351)
T KOG1035|consen  552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS  631 (1351)
T ss_pred             ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence                                                                0                      0    


Q ss_pred             -------------------------------------CeEEEEEecCCCCCHHHHHhcCCCCCCC-CHHHHHHHHHHHHH
Q 021173          251 -------------------------------------DQRMLIYERLFHGSLDRLIYGRSDGPPI-DWNTRVKIALCAAQ  292 (316)
Q Consensus       251 -------------------------------------~~~~lV~Ey~~~GsL~~~L~~~~~~~~l-~~~~~~~ia~qia~  292 (316)
                                                           ..+||=||||+...|.++++.+.   .. .....++++.+|+.
T Consensus       632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~---~~~~~d~~wrLFreIlE  708 (1351)
T KOG1035|consen  632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH---FNSQRDEAWRLFREILE  708 (1351)
T ss_pred             cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc---cchhhHHHHHHHHHHHH
Confidence                                                 23678899999977887777653   12 36678899999999


Q ss_pred             HHHHHHhcCCCCcEEeccCCCCC
Q 021173          293 GLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       293 gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      ||.|+|+.   +||||||||.||
T Consensus       709 GLaYIH~~---giIHRDLKP~NI  728 (1351)
T KOG1035|consen  709 GLAYIHDQ---GIIHRDLKPRNI  728 (1351)
T ss_pred             HHHHHHhC---ceeeccCCccee
Confidence            99999995   699999999998

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.70  E-value=7.6e-17  Score=137.36  Aligned_cols=120  Identities=13%  Similarity=0.125  Sum_probs=89.2

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh---------------------------hHhHHHHHHHHHh
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG---------------------------VKEFINDVNTLAS  232 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~  232 (316)
                      ...||+|+||.||+|.+.++..      |++|.+......                           ...+..|...+.+
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~------vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   75 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEE------LAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKR   75 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCE------EEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            3689999999999999874433      677766532100                           1124578999999


Q ss_pred             CCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHH-HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEecc
Q 021173          233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRL-IYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQVIFYYF  310 (316)
Q Consensus       233 l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~-L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~-~~~~~IiHrDl  310 (316)
                      +.|+++.....+...    ..+|||||++|+++... +...    .++......++.|++.+|.|||+ .   +|+||||
T Consensus        76 l~~~~i~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~~----~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDl  144 (190)
T cd05145          76 LYEAGVPVPEPILLK----KNVLVMEFIGDDGSPAPRLKDV----PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDL  144 (190)
T ss_pred             HHhCCCCCceEEEec----CCEEEEEEecCCCchhhhhhhc----cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence            999987655444332    24899999998865433 4322    37888899999999999999999 5   6999999


Q ss_pred             CCCCCC
Q 021173          311 EMIKTE  316 (316)
Q Consensus       311 Kp~NI~  316 (316)
                      ||+||.
T Consensus       145 kP~NIl  150 (190)
T cd05145         145 SEYNIL  150 (190)
T ss_pred             ChhhEE
Confidence            999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.70  E-value=3.2e-18  Score=147.59  Aligned_cols=139  Identities=19%  Similarity=0.228  Sum_probs=111.2

Q ss_pred             CCccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCC
Q 021173          160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHP  236 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~Hp  236 (316)
                      .....|+-+.+...       ..||.|+||+|++-.++..+.     .+|||++..  .....++|+.|.++..+- +.|
T Consensus        56 ~~~~~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~-----~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp  123 (361)
T KOG1006|consen   56 AHLHTFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGK-----LMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCP  123 (361)
T ss_pred             ccccccccchHHHH-------HHhcCCcchhhhhhhcCccCc-----EEEEEEeeeccchHHHHHHHHHHHHHHhhcCCc
Confidence            44556777777666       789999999999999987775     389999874  345567799999876665 589


Q ss_pred             CcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHh---cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCC
Q 021173          237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY---GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMI  313 (316)
Q Consensus       237 nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~---~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~  313 (316)
                      |||++||.++.+  +..||.||.|.- +|..+..   .-. ...+++.-.-.|...+..||+||-..  ..||||||||+
T Consensus       124 ~IVkfyGa~F~E--GdcWiCMELMd~-SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPS  197 (361)
T KOG1006|consen  124 NIVKFYGALFSE--GDCWICMELMDI-SLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPS  197 (361)
T ss_pred             HHHHHhhhhhcC--CceeeeHHHHhh-hHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChh
Confidence            999999999986  789999999964 6644333   221 33588888889999999999999997  68999999999


Q ss_pred             CCC
Q 021173          314 KTE  316 (316)
Q Consensus       314 NI~  316 (316)
                      ||+
T Consensus       198 NIL  200 (361)
T KOG1006|consen  198 NIL  200 (361)
T ss_pred             heE
Confidence            995

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.70  E-value=1.1e-17  Score=144.71  Aligned_cols=129  Identities=12%  Similarity=0.142  Sum_probs=110.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~  253 (316)
                      +.|.+.+.||+|.||.+.++.++..+.     .+++|.+.......++|.+|...--.|. |.||+.-|...... .+.+
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t-----~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt-~d~Y   97 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKT-----RIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT-SDAY   97 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCce-----EEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhc-CceE
Confidence            456777999999999999999988775     4888988877788889999988766664 99999887654443 5788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++++||++.|+|..-+...+    +.+.....++.|++.||+|+|+   .++||||||.+||+
T Consensus        98 vF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiL  153 (378)
T KOG1345|consen   98 VFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENIL  153 (378)
T ss_pred             EEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEE
Confidence            99999999999998887654    8889999999999999999999   47999999999995

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.69  E-value=1e-16  Score=138.86  Aligned_cols=134  Identities=13%  Similarity=0.238  Sum_probs=109.0

Q ss_pred             ccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCC-CCCcce
Q 021173          164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQ-HPNLCK  240 (316)
Q Consensus       164 ~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~  240 (316)
                      .....|+...       ..||.|..|.|++++++.++.+     +|||.+..  ..+..++++..+.++.+.+ .|.||+
T Consensus        88 ~~dindl~~l-------~dlGsGtcG~V~k~~~rs~~~i-----iAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~  155 (391)
T KOG0983|consen   88 QADINDLENL-------GDLGSGTCGQVWKMRFRSTGHI-----IAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQ  155 (391)
T ss_pred             ccChHHhhhH-------HhhcCCCccceEEEEEcccceE-----EEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeee
Confidence            3445555544       6799999999999999987763     89998863  5566778899999888876 899999


Q ss_pred             eeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||..+  ..+++.||.|.. -+..+|..-.  .++++..+-++...+..||.||.++.  +|||||+||+||+
T Consensus       156 c~GyFi~n--~dV~IcMelMs~-C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNIL  224 (391)
T KOG0983|consen  156 CFGYFITN--TDVFICMELMST-CAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNIL  224 (391)
T ss_pred             eeeEEeeC--chHHHHHHHHHH-HHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceE
Confidence            99999986  778999998843 4555555532  35888888899999999999999974  7999999999995

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.68  E-value=2.9e-16  Score=142.51  Aligned_cols=133  Identities=14%  Similarity=0.107  Sum_probs=92.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCchh----------hHhHHHHHHHHHhCCCCCcceee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQG----------VKEFINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~----------~~~~~~E~~~l~~l~HpnIv~l~  242 (316)
                      +.|...++||+|+||.||+|.+.++......  +++|...  .....          ......+...+..+.|+||+.++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~--~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   89 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQ--AVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY   89 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccc--eEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence            5688889999999999999998776321111  3344322  11100          01123344456677899999999


Q ss_pred             eEEEcCCC--CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGS--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~--~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++.....  ...+++||++.. ++.+++....   .+++..+..|+.|++.||.|||+.   +|+||||||+||+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nil  158 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIM  158 (294)
T ss_pred             EeeeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            87665311  244788887754 6777765532   367888999999999999999994   7999999999984

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.68  E-value=4.2e-17  Score=136.07  Aligned_cols=130  Identities=20%  Similarity=0.243  Sum_probs=105.9

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ......||+|+||.|-+-++...+.+     +|+|++..  ..+..++.++|+.+..+. ..|.+|.+||.+.++  ..+
T Consensus        48 L~~i~elGrGayG~vekmrh~~sg~i-----mAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re--gdv  120 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQSGTI-----MAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE--GDV  120 (282)
T ss_pred             hhhhhhhcCCccchhhheeeccCCeE-----EEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcc--ccE
Confidence            33347899999999988888766653     88888873  456667789999876665 699999999998886  789


Q ss_pred             EEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||.||.|.. +|..+-..- ..+..+++.-+-+|+..|..||.|||++  ..|||||+||+||+
T Consensus       121 wIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiL  181 (282)
T KOG0984|consen  121 WICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNIL  181 (282)
T ss_pred             EEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEE
Confidence            999999965 786665542 1245689999999999999999999998  68999999999995

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.68  E-value=2e-16  Score=142.53  Aligned_cols=131  Identities=8%  Similarity=0.113  Sum_probs=110.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC--CC----CcceeeeEEEc
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--HP----NLCKLLGFHAR  247 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--Hp----nIv~l~g~~~~  247 (316)
                      ++.|.+...+|+|.||.|..|.+.....     .+|+|+++.-....+.-+-|+++|.++.  -|    -+|.+.+||.-
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~-----~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy  162 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKE-----HVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY  162 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCc-----eehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence            7789999999999999999999988754     4899999865566667788999999993  22    25667777766


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        .++.|||+|.+ |-+++++|..+. -.+|+...+..|+.|++.++.|||+   ..++|-||||+||+
T Consensus       163 --rghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENIL  224 (415)
T KOG0671|consen  163 --RGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENIL  224 (415)
T ss_pred             --cCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEE
Confidence              48999999977 569999999865 4469999999999999999999999   47999999999995

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.67  E-value=7.2e-16  Score=132.93  Aligned_cols=128  Identities=18%  Similarity=0.226  Sum_probs=109.1

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|++|.||++...+++.     .+++|.+.....  ..+.+.+|++.+..++|+|++++++++...  +..+
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~-----~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~--~~~~   73 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGE-----LVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDP--EPLY   73 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCc-----EEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecC--CceE
Confidence            4556889999999999999987443     378887764332  567899999999999999999999998874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++||+.+++|.+++.....  .+++..+..++.+++.+|.|||..   +++|+||++.||.
T Consensus        74 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~  130 (225)
T smart00221       74 LVMEYCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENIL  130 (225)
T ss_pred             EEEeccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            99999999999999987541  188999999999999999999995   7999999999974

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.67  E-value=7.7e-18  Score=160.50  Aligned_cols=130  Identities=18%  Similarity=0.200  Sum_probs=112.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|.....||.|.||.||++++...++.     .++|.++. ......-...|+-+++.++|+|||.++|.|...  +.
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~el-----aavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~--dk   86 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGEL-----AAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRR--DK   86 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCch-----hhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhh--cC
Confidence            35677789999999999999999877763     67777763 334456677899999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|++||||.+|+|.+.-+..+   ++++.++..++++.++||.|||+.   +-+|||||-.||+
T Consensus        87 lwicMEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanil  144 (829)
T KOG0576|consen   87 LWICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANIL  144 (829)
T ss_pred             cEEEEEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---Cccccccccccee
Confidence            999999999999999887754   699999999999999999999995   5699999999985

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=3.4e-16  Score=155.50  Aligned_cols=135  Identities=21%  Similarity=0.291  Sum_probs=112.4

Q ss_pred             CCCcceeeecCceEEEEEEECCCCce--eEEEEEeeeecCC--CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDAST--SKKFEATVTRLNP--SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSD  251 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~--~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~  251 (316)
                      ....+.||+|.||.|++|...+-...  ...+.||||.++.  .....+.+..|+.+|+.+. |+||+.++|+|..  .+
T Consensus       298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~--~~  375 (609)
T KOG0200|consen  298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ--DG  375 (609)
T ss_pred             ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc--CC
Confidence            34446999999999999987543321  2345699999874  3355678999999999995 9999999999998  48


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC-----CC--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS-----DG--------PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~-----~~--------~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|+||+..|+|..+|+...     ..        ..+.....+.++.|||.||+||++   .++|||||-..||+
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVL  450 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVL  450 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEE
Confidence            8999999999999999999865     00        238889999999999999999999   57999999999985

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=2.2e-16  Score=147.98  Aligned_cols=128  Identities=13%  Similarity=0.181  Sum_probs=106.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC---CCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~  250 (316)
                      ..|.+.+.||.|+.+.||++...+...      +++|++.   .+.+....|.+|+.+|.+|+ |.+||+||+|-..+  
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~i------yalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d--  432 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQI------YALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD--  432 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcc------hhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC--
Confidence            346777999999999999999877654      6666554   35666788999999999996 99999999999885  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||-+ .||..+|..+. ....+| .+..|-.|+++++.++|.+   +|||.||||.|.+
T Consensus       433 ~~lYmvmE~Gd-~DL~kiL~k~~-~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFL  492 (677)
T KOG0596|consen  433 GYLYMVMECGD-IDLNKILKKKK-SIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFL  492 (677)
T ss_pred             ceEEEEeeccc-ccHHHHHHhcc-CCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEE
Confidence            89999999664 59999999875 223445 6778889999999999996   6999999999963

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.66  E-value=1.3e-15  Score=128.81  Aligned_cols=122  Identities=21%  Similarity=0.344  Sum_probs=104.9

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEecC
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERL  260 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~  260 (316)
                      ||+|.+|.||++...+++.     .+++|.......  ....+.+|+.+++.+.|++|+++++++...  ...+++|||+
T Consensus         1 l~~g~~~~v~~~~~~~~~~-----~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~~~~e~~   73 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGK-----KVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDE--NHLYLVMEYC   73 (215)
T ss_pred             CCcCCceEEEEEEecCCCc-----EEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecC--CeEEEEEecC
Confidence            6899999999999986443     377787764433  356799999999999999999999999874  7899999999


Q ss_pred             CCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          261 FHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       261 ~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|.+++....  ..+++..+..++.+++.+|.|||+.   +++|+||+|.||.
T Consensus        74 ~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~  124 (215)
T cd00180          74 EGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENIL  124 (215)
T ss_pred             CCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEE
Confidence            9999999998652  2489999999999999999999995   6999999999984

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.66  E-value=2.5e-16  Score=155.04  Aligned_cols=137  Identities=14%  Similarity=0.111  Sum_probs=89.2

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEE----EcC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFH----ARD  248 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~----~~~  248 (316)
                      ..++|...+.||+|+||.||+|++.++.. .+...+++|.+..... .+.+.+|  .+....+.++..++..+    ...
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~-~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQS-KKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCcc-ccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            56789999999999999999999987611 0112378887653221 1122222  12222233333322211    112


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDG-----------------PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE  311 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~-----------------~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlK  311 (316)
                      ..+..+|||||+.+++|.+++......                 ....+..+..|+.||+.||.|||+.   +|||||||
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK  282 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK  282 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence            247899999999999999998764210                 0012234567999999999999995   79999999


Q ss_pred             CCCCC
Q 021173          312 MIKTE  316 (316)
Q Consensus       312 p~NI~  316 (316)
                      |+||+
T Consensus       283 P~NIL  287 (566)
T PLN03225        283 PQNII  287 (566)
T ss_pred             HHHEE
Confidence            99984

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.66  E-value=1.6e-16  Score=144.57  Aligned_cols=132  Identities=16%  Similarity=0.173  Sum_probs=109.7

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCC
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDG  249 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~  249 (316)
                      ....+.|...++||+|.|++||++++...  ......|++|.+... ..-.++.+|+++|..+. +.||+.+.+++..+ 
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~--~~~~~~valk~i~~t-s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn-  107 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRT-SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN-  107 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhh--ccccceEeeeecccc-cCchHHHHHHHHHHHhccchhhhcchhhhccC-
Confidence            34456788899999999999999998762  111234889988632 23356889999999996 89999999988874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+++||||+++....+++..      ++...+..+++.++.||.|+|..   +||||||||+|++
T Consensus       108 -d~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL  164 (418)
T KOG1167|consen  108 -DQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFL  164 (418)
T ss_pred             -CeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccc
Confidence             899999999999999988865      66788899999999999999995   6999999999985

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.65  E-value=4.9e-16  Score=152.54  Aligned_cols=127  Identities=7%  Similarity=0.070  Sum_probs=97.4

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      .....|...+.||+|+||.||+|.+.+...++++. + .|....    .....+.+.+|++++..++|++|+..+.++.+
T Consensus       330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~-~-~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~  407 (535)
T PRK09605        330 EVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKER-V-PKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD  407 (535)
T ss_pred             ccccccCccceeccCCcEEEEEEeecCccceeEEE-e-cccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe
Confidence            33445566799999999999999987766433321 1 111111    11223568999999999999999988777766


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +..+|||||+++++|.+++.           ....++.+++.+|.|||+.   +|+||||||+||+
T Consensus       408 ~--~~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NIL  460 (535)
T PRK09605        408 P--EEKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFI  460 (535)
T ss_pred             C--CCCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEE
Confidence            3  56789999999999998875           3467899999999999995   6999999999984

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.63  E-value=8.2e-17  Score=146.31  Aligned_cols=129  Identities=19%  Similarity=0.140  Sum_probs=109.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~  249 (316)
                      .+|....+||+|+||+|.++.-+++.+.     +|||+++++    ..+.+--+.|-.+|.... -|.+++|+.+|..  
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdEL-----yAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQT--  421 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDEL-----YAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQT--  421 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchh-----hhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhh--
Confidence            4577789999999999999998888763     888888753    234455677888888774 7889999988877  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.+|+||||+.||+|.-+|+.-+   .|.+..++.+|.+||-||-|||+.   +||+||||.+||.
T Consensus       422 mDRLyFVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvm  482 (683)
T KOG0696|consen  422 MDRLYFVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVM  482 (683)
T ss_pred             hhheeeEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceE
Confidence            589999999999999999998765   488899999999999999999994   7999999999984

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=8.4e-18  Score=144.05  Aligned_cols=130  Identities=14%  Similarity=0.246  Sum_probs=104.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCchh-hHhHHHHHHHHHhCCCCCcceeeeEEEcC----
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQG-VKEFINDVNTLASLQHPNLCKLLGFHARD----  248 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~----  248 (316)
                      .|....+||+|.||.||+++..+++.     .|++|++-  ..+.+ -..-++|+.+|..|.|+|++.|+..|...    
T Consensus        18 ~yek~~kigqGtfgeVFkAr~~n~~k-----kvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~   92 (376)
T KOG0669|consen   18 KYEKLAKIGQGTFGEVFKARSKNTGK-----KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPT   92 (376)
T ss_pred             HHHHHHhcCCchHHHHHHHhhcCccc-----hhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence            34455789999999999999988774     25666542  22222 23357999999999999999999888641    


Q ss_pred             --CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 --GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 --~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ....+||||.+|++ +|.-+|....  ..|+..++.+++.++..||.|+|..   .|+|||+|++||+
T Consensus        93 ~r~r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvL  156 (376)
T KOG0669|consen   93 NRDRATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVL  156 (376)
T ss_pred             ccccceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEE
Confidence              13458999999988 9999987753  3589999999999999999999995   7999999999984

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.63  E-value=2.1e-15  Score=130.10  Aligned_cols=117  Identities=11%  Similarity=0.120  Sum_probs=92.9

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---------hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +.||+|++|.||+|.+.+..       +++|......         .....+.+|+.++..+.|++|.....++...  +
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~-------~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~   72 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIK-------AVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP--E   72 (211)
T ss_pred             cccccCceEEEEEEeeCCCc-------eEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC--C
Confidence            57999999999999985544       4555433211         1124588999999999999988777776653  6


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||++|++|.+++....      + .+..++.+++.+|.+||+.   +|+|+|++|.||+
T Consensus        73 ~~~lv~e~~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil  127 (211)
T PRK14879         73 NFIIVMEYIEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMI  127 (211)
T ss_pred             CCEEEEEEeCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEE
Confidence            7899999999999999986532      2 7888999999999999995   6999999999984

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=1.5e-16  Score=147.81  Aligned_cols=128  Identities=11%  Similarity=0.143  Sum_probs=108.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++.....||-|+||.|-++.......     .+|+|.+++    +....+....|-.+|..++.+.||+||..|.++  .
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~-----~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~--k  493 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKA-----TFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS--K  493 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccch-----HHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc--h
Confidence            34445779999999999988876653     267777763    334445678899999999999999999999885  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|++||-|-||.|+..|+.++   .|+..+...|+.++.+|++|||.+   +||+|||||+|..
T Consensus       494 yvYmLmEaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENll  552 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLL  552 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhhee
Confidence            9999999999999999999876   599999999999999999999994   7999999999963

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=6.8e-16  Score=137.16  Aligned_cols=131  Identities=12%  Similarity=0.144  Sum_probs=111.3

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEc
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHAR  247 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~  247 (316)
                      ..++|...++||+|+|++|..+++..+..+     +|+|.+++    +.++..-...|-.+..+. +||.+|-|+.+|..
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qi-----yamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt  322 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQI-----YAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT  322 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehccccee-----eehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence            346888999999999999999999888764     77777653    344455567777777776 59999999999988


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +  ..+++|.||++||+|.-+++.+.   .++++.+..+..+|+.||.|||+.   +||+||||..||+
T Consensus       323 e--srlffvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvl  383 (593)
T KOG0695|consen  323 E--SRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVL  383 (593)
T ss_pred             c--ceEEEEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceE
Confidence            5  78999999999999988888765   499999999999999999999995   6999999999985

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.60  E-value=3.5e-15  Score=137.43  Aligned_cols=130  Identities=18%  Similarity=0.143  Sum_probs=102.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCC----CCcceeeeEEE-cCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQH----PNLCKLLGFHA-RDG  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H----pnIv~l~g~~~-~~~  249 (316)
                      .|...+.||+|+||.||.+.......    ..+++|..... ......+..|+.++..+..    .++..+++... .  
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~----~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~--   92 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKN----KEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRST--   92 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCC----eeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCC--
Confidence            78889999999999999999877641    12555554422 1112267889999999873    58888888774 3  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....||||+.+ |-+|.++..... ...|+..+.+.|+.|++.+|++||+.   ++|||||||+|++
T Consensus        93 ~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~  154 (322)
T KOG1164|consen   93 EDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFV  154 (322)
T ss_pred             CceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHee
Confidence            37889999966 779999886654 45799999999999999999999995   6999999999985

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.59  E-value=4.4e-15  Score=127.01  Aligned_cols=113  Identities=12%  Similarity=0.146  Sum_probs=85.6

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---------chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---------SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .||+|+||.||+|.+.+..       +++|.....         .....++.+|+.++..+.|.++.....++..+  +.
T Consensus         1 ~ig~G~~~~vy~~~~~~~~-------~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~--~~   71 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLK-------AVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP--DN   71 (199)
T ss_pred             CCCCCceEEEEEeecCCcc-------EEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC--CC
Confidence            4899999999999976543       455543211         11235678999999999988765544444443  56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||++|++|.+++....    .      .++.+++.+|.+||+.   +|+|+|++|.||+
T Consensus        72 ~~lv~e~~~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil  122 (199)
T TIGR03724        72 KTIVMEYIEGKPLKDVIEEGN----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNII  122 (199)
T ss_pred             CEEEEEEECCccHHHHHhhcH----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEE
Confidence            789999999999999876532    1      7889999999999994   7999999999984

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=99.59  E-value=3.3e-15  Score=131.60  Aligned_cols=125  Identities=14%  Similarity=0.072  Sum_probs=89.5

Q ss_pred             CCCCCcceeeecCceEEEEEE-ECCCCceeEEEEEeeeecCCCch-------------------------hhHhHHHHHH
Q 021173          175 HNFFSDRCISEGLSSVMYRAS-FGDDASTSKKFEATVTRLNPSSQ-------------------------GVKEFINDVN  228 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~-~~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~  228 (316)
                      ..|...+.||+|+||.||+|. ...++.     .|++|.+.....                         ....+.+|+.
T Consensus        28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~  102 (237)
T smart00090       28 ILSAIGGCISTGKEANVYHALDFDGSGK-----ERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFR  102 (237)
T ss_pred             chHHhCCeeccCcceeEEEEEecCCCCc-----EEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHH
Confidence            357788999999999999998 332332     267776652210                         0123568999


Q ss_pred             HHHhCCCCC--cceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-c
Q 021173          229 TLASLQHPN--LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ-V  305 (316)
Q Consensus       229 ~l~~l~Hpn--Iv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~-I  305 (316)
                      ++.++.+..  +..++++      ...+|||||+.+++|..++....   .+.......++.|++.+|.|||..   + |
T Consensus       103 ~L~~L~~~~i~~p~~~~~------~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~i  170 (237)
T smart00090      103 NLQRLYEAGVPVPKPIAW------RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GEL  170 (237)
T ss_pred             HHHHHHhcCCCCCeeeEe------cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence            999997533  3444432      23489999999988876543322   356666788999999999999995   5 9


Q ss_pred             EEeccCCCCCC
Q 021173          306 IFYYFEMIKTE  316 (316)
Q Consensus       306 iHrDlKp~NI~  316 (316)
                      +||||||+||.
T Consensus       171 iH~Dikp~NIl  181 (237)
T smart00090      171 VHGDLSEYNIL  181 (237)
T ss_pred             EeCCCChhhEE
Confidence            99999999984

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.59  E-value=1.8e-15  Score=147.70  Aligned_cols=125  Identities=17%  Similarity=0.184  Sum_probs=96.2

Q ss_pred             CCCcceeeecCceE-EEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSV-MYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~-Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+++|.|+-|+ ||+|.+.+..       ||||++-...  ..-..+||.+|+..+ |+|||++|+.-.+  ....|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~-------VAVKrll~e~--~~~A~rEi~lL~eSD~H~NviRyyc~E~d--~qF~Y  579 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYEGRE-------VAVKRLLEEF--FDFAQREIQLLQESDEHPNVIRYYCSEQD--RQFLY  579 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeCCce-------ehHHHHhhHh--HHHHHHHHHHHHhccCCCceEEEEeeccC--CceEE
Confidence            45567889998764 7999998874       8999886322  233468999999985 9999999765544  58999


Q ss_pred             EEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |..|.|. .+|.+++.... ......-...+.++.|++.||++||+   .+||||||||.||+
T Consensus       580 IalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNIL  638 (903)
T KOG1027|consen  580 IALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNIL  638 (903)
T ss_pred             EEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEE
Confidence            9999996 59999998741 11111113456788999999999999   57999999999995

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.59  E-value=9.8e-15  Score=126.78  Aligned_cols=117  Identities=17%  Similarity=0.221  Sum_probs=100.3

Q ss_pred             CceEEEEEEECCCCceeEEEEEeeeecCCCc-hh-hHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCC
Q 021173          187 LSSVMYRASFGDDASTSKKFEATVTRLNPSS-QG-VKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGS  264 (316)
Q Consensus       187 ~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~Gs  264 (316)
                      +||.||+|.+.+++.     .+++|.+.... .. .+.+.+|++++++++|+||+++++++...  ...+++|||+.+++
T Consensus         1 ~~g~v~~~~~~~~~~-----~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--~~~~l~~e~~~~~~   73 (244)
T smart00220        1 SFGKVYLARDKKTGK-----LVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDE--DKLYLVMEYCDGGD   73 (244)
T ss_pred             CceEEEEEEECCCCc-----EEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeC--CEEEEEEeCCCCCC
Confidence            589999999987544     37788776322 22 57899999999999999999999999874  78999999999999


Q ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          265 LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       265 L~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.+++....   .+++..+..++.+++.+|.|||..   +|+|+||+|+||.
T Consensus        74 L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~  119 (244)
T smart00220       74 LFDLLKKRG---RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENIL  119 (244)
T ss_pred             HHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeE
Confidence            999998754   289999999999999999999995   7999999999984

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=2.1e-16  Score=136.91  Aligned_cols=129  Identities=15%  Similarity=0.227  Sum_probs=103.0

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC---
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---  249 (316)
                      +...++-||-|+||.||.+++...+.     .+++|++..   .-...+++.+|+.+|.-.+|.|++.+++...-..   
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgr-----rvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~df  128 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGK-----RVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSF  128 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCcc-----chhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchH
Confidence            44556899999999999999876554     278887753   3344577899999999999999999887654321   


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      -..+|+|+|.|.. +|..+|..-.   .++.+.+.-+++||++||.|||+.   +|+||||||.|.+
T Consensus       129 FqEiYV~TELmQS-DLHKIIVSPQ---~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLL  188 (449)
T KOG0664|consen  129 FQELYVLTELMQS-DLHKIIVSPQ---ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLL  188 (449)
T ss_pred             HHHHHHHHHHHHh-hhhheeccCC---CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEE
Confidence            1346888898854 8888887643   588888888999999999999995   7999999999964

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.57  E-value=3.8e-15  Score=142.06  Aligned_cols=126  Identities=17%  Similarity=0.151  Sum_probs=103.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++.|.....+|.|+|+.|-.|....+..     ..++|++...   ..+..+|+.++... +|+||+++.+.+.+.  .+
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~-----~~~vkii~~~---~~~~~~e~~~~~~~~~h~niv~~~~v~~~~--~~  390 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQ-----EPAVKIISKR---ADDNQDEIPISLLVRDHPNIVKSHDVYEDG--KE  390 (612)
T ss_pred             chhhccccccCCCCccceeeeecccccc-----chhheecccc---ccccccccchhhhhcCCCcceeecceecCC--ce
Confidence            4567777889999999999999877664     3788888744   22345677666666 599999999999884  89


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .|+|||++.||-|.+.+....    ....++..|+.+|+.|+.|||++   +||||||||+||+
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL  447 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNIL  447 (612)
T ss_pred             eeeeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhhee
Confidence            999999999999988887754    33377888999999999999995   6999999999995

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.56  E-value=1.5e-14  Score=125.83  Aligned_cols=123  Identities=10%  Similarity=0.003  Sum_probs=94.8

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHh------HHHHHHHHHhCCCCCcceee
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKE------FINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~------~~~E~~~l~~l~HpnIv~l~  242 (316)
                      ..++|...+++|.|+||.||+.... ...      +++|.+....    .....      |.+|+..+.++.|++|..+.
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~~-~~~------~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~  101 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDTD-YGK------YILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLN  101 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEecC-CCc------EEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcce
Confidence            4678999999999999999997664 332      7788776322    11222      68999999999999999998


Q ss_pred             eEEEcCC------CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDG------SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~------~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++....      ....+|||||++|.+|.++..       ++.    ....+++.+|..||..   +|+|||+||+||.
T Consensus       102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nil  167 (232)
T PRK10359        102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFI  167 (232)
T ss_pred             EeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEE
Confidence            8866431      135799999999999988732       332    2456999999999995   6999999999984

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.55  E-value=1.7e-14  Score=130.51  Aligned_cols=146  Identities=20%  Similarity=0.228  Sum_probs=118.9

Q ss_pred             CHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeee
Q 021173          166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLG  243 (316)
Q Consensus       166 ~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g  243 (316)
                      ...|+......+....++-+|.||.||+|.|++.....+...+-+|.++.  +.-....|+.|..+|..+.|+||..+.+
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            34556666667888899999999999999887655433333466676653  4455677999999999999999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHh-----cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIY-----GRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~-----~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      .+.++ .+..+++|.++.-|+|..+|.     +....+.+...+...++.|++.|++|||.+   +|||.||...|-
T Consensus       355 V~ie~-~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNC  427 (563)
T KOG1024|consen  355 VSIED-YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNC  427 (563)
T ss_pred             EEeec-cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcc
Confidence            99886 578899999999999999998     333345688888999999999999999996   699999998883

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.54  E-value=1.7e-14  Score=123.22  Aligned_cols=135  Identities=16%  Similarity=0.123  Sum_probs=105.1

Q ss_pred             HHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC-CcceeeeEE
Q 021173          167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP-NLCKLLGFH  245 (316)
Q Consensus       167 ~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp-nIv~l~g~~  245 (316)
                      ++++.. .+.|...+.||.|+||.+|.|..-..++     +||+|.-. ......++..|..+...|++- .|..+..|.
T Consensus         8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge-----~VAiK~Es-~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~   80 (341)
T KOG1163|consen    8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGE-----EVAIKLES-SKAKHPQLLYESKVYRILQGGVGIPHIRHYG   80 (341)
T ss_pred             hhhhee-ccceEEEEeecCCchhheeeeeeccCCc-----eEEEEeec-ccCCCcchhHHHHHHHHhccCCCCchhhhhc
Confidence            344333 3678889999999999999999876665     48888644 344456788999999999854 455555444


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+  .+.-.|||+.+ |-+|.+++.-..  +.|+..+++.++-|++.-++|+|.+   ++|||||||+|.+
T Consensus        81 ~e--~~ynvlVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFL  143 (341)
T KOG1163|consen   81 TE--KDYNVLVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFL  143 (341)
T ss_pred             cc--cccceeeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCcccee
Confidence            44  47789999977 779998887542  2599999999999999999999995   6899999999974

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.54  E-value=4.6e-14  Score=120.58  Aligned_cols=112  Identities=14%  Similarity=0.016  Sum_probs=83.8

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhh-----HhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCe
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-----KEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~  252 (316)
                      .+..|++|+||+||.+...+.       .+..+.+.....-.     ..|.+|+++|++|. |++|..++++      +.
T Consensus         6 ~~~~l~~~~f~~v~~~~~~~~-------k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------~~   72 (218)
T PRK12274          6 VNEPLKSDTFGRILLVRGGER-------KFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------DG   72 (218)
T ss_pred             cceeecCCCcceEEEeecCCc-------eeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------cC
Confidence            457899999999997665333       25555555333222     25889999999995 5889999885      33


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecc-CCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYF-EMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDl-Kp~NI~  316 (316)
                      .+++|||+.|.+|.+.+..          ....++.|++.+|.|||.+   +|+|||| ||+||+
T Consensus        73 ~~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NIL  124 (218)
T PRK12274         73 RHLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWL  124 (218)
T ss_pred             EEEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEE
Confidence            6999999999999754321          1135778999999999995   6999999 799984

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.50  E-value=8.4e-14  Score=119.24  Aligned_cols=125  Identities=10%  Similarity=-0.012  Sum_probs=89.6

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch-----------------------hhHhHH
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-----------------------GVKEFI  224 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~  224 (316)
                      .++......|...+.||+|+||.||++.+.++..      +++|.+.....                       ....+.
T Consensus         8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~------vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (198)
T cd05144           8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNP------VALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQ   81 (198)
T ss_pred             HHHHHcCchhhcCCccccCcceEEEEEEcCCCCE------EEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHH
Confidence            3444444447778999999999999998865443      67776442110                       112367


Q ss_pred             HHHHHHHhCCCCC--cceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 021173          225 NDVNTLASLQHPN--LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP  302 (316)
Q Consensus       225 ~E~~~l~~l~Hpn--Iv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~  302 (316)
                      .|..++..+.|.+  +...++.      ...++||||++|++|..+...         .....++.+++.+|.+||+.  
T Consensus        82 ~E~~~l~~l~~~~i~v~~~~~~------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~--  144 (198)
T cd05144          82 KEFAALKALYEEGFPVPKPIDW------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH--  144 (198)
T ss_pred             HHHHHHHHHHHcCCCCCceeec------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC--
Confidence            7899999998774  4444431      445899999999999765431         23456889999999999994  


Q ss_pred             CCcEEeccCCCCCC
Q 021173          303 FQVIFYYFEMIKTE  316 (316)
Q Consensus       303 ~~IiHrDlKp~NI~  316 (316)
                       +|+||||||+||+
T Consensus       145 -gi~H~Dl~p~Nil  157 (198)
T cd05144         145 -GIIHGDLSEFNIL  157 (198)
T ss_pred             -CCCcCCCCcccEE
Confidence             7999999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.47  E-value=2e-13  Score=121.47  Aligned_cols=128  Identities=15%  Similarity=0.151  Sum_probs=99.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~  253 (316)
                      -+|..+++||+|.||.++.|..--+++     .||||.-. .....-++..|....+.|. .+.|...|-|-.+  +-+-
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne-----~VAIKfEP-rkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqe--G~~N   99 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNE-----PVAIKFEP-RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQE--GKYN   99 (449)
T ss_pred             ccceeccccccCcceeeecccccccCc-----eEEEEecc-ccCCcchHHHHHHHHHHHcCCCCCCceeeeccc--cchh
Confidence            368888999999999999998754443     27777543 3344556778888888885 6788777643332  4677


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .||||.+ |-+|.|++.-.  ++.|+..+++.||.|++.-++|+|++   .+|+|||||+|.+
T Consensus       100 iLVidLL-GPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFL  156 (449)
T KOG1165|consen  100 ILVIDLL-GPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFL  156 (449)
T ss_pred             hhhhhhh-CcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCcccee
Confidence            8999977 66998887654  33699999999999999999999994   7999999999974

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.45  E-value=3.6e-13  Score=108.53  Aligned_cols=117  Identities=17%  Similarity=0.094  Sum_probs=93.5

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC--CCcceeeeEEEcCCCCeEEEEE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH--PNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      .+.||+|.++.||++...+..       +++|....... ...+.+|+.++..++|  .++.++++++...  +..+++|
T Consensus         3 ~~~i~~g~~~~v~~~~~~~~~-------~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--~~~~~v~   72 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKDED-------YVLKINPSREK-GADREREVAILQLLARKGLPVPKVLASGESD--GWSYLLM   72 (155)
T ss_pred             ceecccccccceEEEEecCCe-------EEEEecCCCCc-hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--CccEEEE
Confidence            478999999999999986632       77777764333 5678999999999976  5888988877653  7799999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+.++.+..+          +......++.+++.+|.+||.....+|+|+||+|+||.
T Consensus        73 e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil  121 (155)
T cd05120          73 EWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL  121 (155)
T ss_pred             EecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEE
Confidence            99998877543          44566778999999999999853236999999999984

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.43  E-value=1.6e-13  Score=128.24  Aligned_cols=142  Identities=13%  Similarity=0.100  Sum_probs=116.9

Q ss_pred             ccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC------C
Q 021173          162 LRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ------H  235 (316)
Q Consensus       162 ~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------H  235 (316)
                      +-.+.+-|+.  -..|......|+|-|++|.+|.+...+.     .||||+|.......+.=+.|++||.+|.      -
T Consensus       421 YYrv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~-----~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk  493 (752)
T KOG0670|consen  421 YYRVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQ-----EVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDK  493 (752)
T ss_pred             eEEEehhhhh--cceeEEEeccccceeeeeeeccccCCCC-----eeEEEEeecchHHhhhhhHHHHHHHHhhccCchhh
Confidence            3344444443  3457777788999999999999876654     4999999988777777889999999994      3


Q ss_pred             CCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       236 pnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      -|+++|+..|..  .+++|||+|-+.- +|.+.|...+.+..|....+..|+.|+..||..|-.+   +|+|.||||.||
T Consensus       494 ~Hclrl~r~F~h--knHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNi  567 (752)
T KOG0670|consen  494 FHCLRLFRHFKH--KNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNI  567 (752)
T ss_pred             hHHHHHHHHhhh--cceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccce
Confidence            478888887776  4999999998754 9999999876666788899999999999999999995   699999999999


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      +
T Consensus       568 L  568 (752)
T KOG0670|consen  568 L  568 (752)
T ss_pred             E
Confidence            5

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.40  E-value=2e-13  Score=120.76  Aligned_cols=126  Identities=16%  Similarity=0.186  Sum_probs=95.9

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC---
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG---  249 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~---  249 (316)
                      .|.....+|.|.- .|..+.+.-.+.     .|++|++..   .....++-.+|..++..+.|+||++++.+|.-..   
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~-----~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGR-----PVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccC-----ceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence            3555567777776 566665543332     266666642   2334456678999999999999999999886421   


Q ss_pred             -CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       -..+|+|||||.. +|...+.-.     ++-.+...|.+|+++|+.|||+.   +|+||||||+||.
T Consensus        92 ~~~e~y~v~e~m~~-nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsniv  150 (369)
T KOG0665|consen   92 EFQEVYLVMELMDA-NLCQVILME-----LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIV  150 (369)
T ss_pred             HHHhHHHHHHhhhh-HHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccce
Confidence             2567999999965 999888832     78889999999999999999995   6999999999984

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.39  E-value=5.3e-12  Score=113.06  Aligned_cols=127  Identities=24%  Similarity=0.303  Sum_probs=103.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHHHhCCCC-CcceeeeEEEcCCCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHP-NLCKLLGFHARDGSD  251 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~Hp-nIv~l~g~~~~~~~~  251 (316)
                      |.....||.|+||.||++.+.  .      .+++|.+....    .....|.+|+.++..+.|+ +|+.++.++...  .
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~------~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~--~   71 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--K------LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDE--G   71 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--c------EEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecC--C
Confidence            455688999999999999988  1      26667665321    2467799999999999988 799999999653  5


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+++++|+.+++|.+++........+.......++.|++.+|.|+|..   +++|||+||+||+
T Consensus        72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil  133 (384)
T COG0515          72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENIL  133 (384)
T ss_pred             EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHee
Confidence            5899999999999997776542112488899999999999999999995   6999999999984

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.38  E-value=3.2e-12  Score=112.76  Aligned_cols=125  Identities=10%  Similarity=0.031  Sum_probs=85.6

Q ss_pred             ceee-ecCceEEEEEEECCCCceeEEEE---EeeeecCC----CchhhHhHHHHHHHHHhCCCCCc--ceeeeEEEcCCC
Q 021173          181 RCIS-EGLSSVMYRASFGDDASTSKKFE---ATVTRLNP----SSQGVKEFINDVNTLASLQHPNL--CKLLGFHARDGS  250 (316)
Q Consensus       181 ~~IG-~G~fg~Vy~~~~~~~~~~~~~~~---vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnI--v~l~g~~~~~~~  250 (316)
                      ..|| .|+.|+||.+...+...+++.+.   +.+|.+..    .......+.+|++++..|.|.+|  +..+++......
T Consensus        37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~  116 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG  116 (239)
T ss_pred             ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence            6787 88999999988875543222221   11111111    11233568899999999998775  677776544321


Q ss_pred             C--eEEEEEecCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 D--QRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~--~~~lV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  ..+|||||++| .+|.+++...    .++..    .+.+|+.+|.+||+.   +|+||||||+||+
T Consensus       117 ~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NIL  174 (239)
T PRK01723        117 LFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNIL  174 (239)
T ss_pred             cceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEE
Confidence            1  23599999997 6999888653    25543    356899999999995   6999999999984

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.36  E-value=9.3e-13  Score=111.36  Aligned_cols=118  Identities=13%  Similarity=0.069  Sum_probs=76.9

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch---hhHh----------------------HHHHHHHHHhCC
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ---GVKE----------------------FINDVNTLASLQ  234 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~----------------------~~~E~~~l~~l~  234 (316)
                      .+.||+|+||.||+|.+.++..      +++|.+.....   ....                      ...|...+..+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~------vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~   75 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEP------VAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLY   75 (187)
T ss_pred             CcccccccceeEEEEECCCCCE------EEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHH
Confidence            3689999999999999874443      77776553211   1111                      134556666664


Q ss_pred             CCC--cceeeeEEEcCCCCeEEEEEecCCCCCHHH-HHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccC
Q 021173          235 HPN--LCKLLGFHARDGSDQRMLIYERLFHGSLDR-LIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE  311 (316)
Q Consensus       235 Hpn--Iv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~-~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlK  311 (316)
                      +..  +.+.+++      ...+|||||++++.+.. .+....    .. .....++.+++.++.+||..  .+|+|+|||
T Consensus        76 ~~~~~~~~~~~~------~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~  142 (187)
T cd05119          76 EAGVPVPKPIDL------NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYRE--AGLVHGDLS  142 (187)
T ss_pred             HcCCCCCceEec------CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCC
Confidence            332  3444432      34589999999965422 222111    11 55678999999999999983  269999999


Q ss_pred             CCCCC
Q 021173          312 MIKTE  316 (316)
Q Consensus       312 p~NI~  316 (316)
                      |+||.
T Consensus       143 p~Nil  147 (187)
T cd05119         143 EYNIL  147 (187)
T ss_pred             hhhEE
Confidence            99984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.32  E-value=1.3e-12  Score=132.47  Aligned_cols=129  Identities=17%  Similarity=0.162  Sum_probs=94.0

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC---CCCcceeeeEEEc
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHAR  247 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~  247 (316)
                      +.....|.+.+.||+|+||.||+|...++..      +|+|.-......  +|--=.+++.+|+   -+.|+.+...+..
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~------~alK~e~P~~~W--EfYI~~q~~~RLk~~~~~~~~~~~~a~~~  765 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKL------VALKVEKPPNPW--EFYICLQVMERLKPQMLPSIMHISSAHVF  765 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCCCcE------EEEEeecCCCce--eeeehHHHHHhhchhhhcchHHHHHHHcc
Confidence            3445567888999999999999999888543      788876532111  1111123334443   1233444433333


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                        .+..+||+||.+.|+|.+++....   .++|..++.|+.|++..++.||..   +|||+||||+|.
T Consensus       766 --~~~S~lv~ey~~~Gtlld~~N~~~---~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNf  825 (974)
T KOG1166|consen  766 --QNASVLVSEYSPYGTLLDLINTNK---VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNF  825 (974)
T ss_pred             --CCcceeeeeccccccHHHhhccCC---CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCccee
Confidence              377899999999999999998543   599999999999999999999995   699999999995

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.07  E-value=3.1e-10  Score=94.13  Aligned_cols=114  Identities=14%  Similarity=0.039  Sum_probs=80.2

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcc-eeeeEEEcCCCCeEEEEEec
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC-KLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv-~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      +.|+.|.++.||++...+..       +++|...........+.+|+.++..+.+.+++ +++.+..    +..++||||
T Consensus         4 ~~l~~G~~~~vy~~~~~~~~-------~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~----~~~~lv~e~   72 (170)
T cd05151           4 SPLKGGMTNKNYRVEVANKK-------YVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDP----ETGVLITEF   72 (170)
T ss_pred             eecCCcccCceEEEEECCeE-------EEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeC----CCCeEEEEe
Confidence            56889999999999876432       77777654332334578899999998755544 4554432    335799999


Q ss_pred             CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG--PFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~--~~~IiHrDlKp~NI~  316 (316)
                      ++|.++...   .     .   ....++.+++.+|..||..+  ...++|+|++|.||.
T Consensus        73 i~G~~l~~~---~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil  120 (170)
T cd05151          73 IEGSELLTE---D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFL  120 (170)
T ss_pred             cCCCccccc---c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEE
Confidence            999887543   0     1   11235678999999999953  123699999999983

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.02  E-value=1.1e-10  Score=119.94  Aligned_cols=79  Identities=16%  Similarity=0.094  Sum_probs=62.5

Q ss_pred             hCCC-CCcceeeeEEEcCC-----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 021173          232 SLQH-PNLCKLLGFHARDG-----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQV  305 (316)
Q Consensus       232 ~l~H-pnIv~l~g~~~~~~-----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~I  305 (316)
                      .++| .||..++++|....     .+.++++|||+ +++|.++|....  ..+++.+++.|+.||+.||+|||++   +|
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI  101 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI  101 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            3445 58888888773211     24577888987 569999997542  3599999999999999999999995   69


Q ss_pred             EEeccCCCCCC
Q 021173          306 IFYYFEMIKTE  316 (316)
Q Consensus       306 iHrDlKp~NI~  316 (316)
                      |||||||+||+
T Consensus       102 vHrDlKP~NiL  112 (793)
T PLN00181        102 VVHNVRPSCFV  112 (793)
T ss_pred             eeccCCchhEE
Confidence            99999999985

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.01  E-value=9.4e-11  Score=102.08  Aligned_cols=111  Identities=23%  Similarity=0.372  Sum_probs=92.8

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecC---CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      .+|.+...|..|+|+|++...       +.|.++   ......+.|..|.-.|+-+.||||+.++|.|..  +.++.++.
T Consensus       196 tkl~e~hsgelwrgrwqgndi-------vakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns--ppnlv~is  266 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQGNDI-------VAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS--PPNLVIIS  266 (448)
T ss_pred             hhhccCCCcccccccccCcch-------hhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC--CCCceEee
Confidence            557778889999999998874       334443   233445678889888999999999999999988  48899999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG  301 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~  301 (316)
                      .||+.|+|+..|++.. +-.++..++++++.++++|+.|||+-.
T Consensus       267 q~mp~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsle  309 (448)
T KOG0195|consen  267 QYMPFGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLE  309 (448)
T ss_pred             eeccchHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcc
Confidence            9999999999999876 445788899999999999999999864

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=1.9e-10  Score=104.98  Aligned_cols=75  Identities=17%  Similarity=0.239  Sum_probs=62.7

Q ss_pred             CCCCcceeeeEEEcC-------------------------CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHH
Q 021173          234 QHPNLCKLLGFHARD-------------------------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIAL  288 (316)
Q Consensus       234 ~HpnIv~l~g~~~~~-------------------------~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~  288 (316)
                      .|||||.++++|.++                         .+..+||||..... +|..+|..+.    .+......|+.
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la  348 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA  348 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence            599999999887652                         13568999987765 9999999864    66677777899


Q ss_pred             HHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          289 CAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       289 qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+.|||.+   +|.|||||.+||+
T Consensus       349 QlLEav~hL~~h---gvAhRDlKSDNiL  373 (598)
T KOG4158|consen  349 QLLEAVTHLHKH---GVAHRDLKSDNIL  373 (598)
T ss_pred             HHHHHHHHHHHc---cchhhcccccceE
Confidence            999999999996   5999999999995

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.97  E-value=3.3e-09  Score=101.63  Aligned_cols=121  Identities=13%  Similarity=0.053  Sum_probs=78.4

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh-----------------------------------------
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-----------------------------------------  219 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------------------------------  219 (316)
                      +.||.|++|.||+|++.++..      |+||........                                         
T Consensus       123 ~plasaSigQVh~A~l~~G~~------VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~  196 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKE------VAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR  196 (437)
T ss_pred             cceeeeehhheEEEEecCCCE------EEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence            679999999999999987764      777776532100                                         


Q ss_pred             hHhHHHHHHHHHhCC----CCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHH-HH
Q 021173          220 VKEFINDVNTLASLQ----HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ-GL  294 (316)
Q Consensus       220 ~~~~~~E~~~l~~l~----HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~-gL  294 (316)
                      .-.|.+|...+.++.    |.+-+.+-..+.+. ....+|||||++|++|.+++.....  .++   +..++..++. .+
T Consensus       197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~-~~~~vLvmE~i~G~~L~~~~~~~~~--~~~---~~~ia~~~~~~~l  270 (437)
T TIGR01982       197 ELDLRREAANASELGENFKNDPGVYVPEVYWDR-TSERVLTMEWIDGIPLSDIAALDEA--GLD---RKALAENLARSFL  270 (437)
T ss_pred             HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhh-cCCceEEEEeECCcccccHHHHHhc--CCC---HHHHHHHHHHHHH
Confidence            012556666666652    33333332333221 2457999999999999887654221  122   3446666655 46


Q ss_pred             HHHHhcCCCCcEEeccCCCCCC
Q 021173          295 TFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       295 ~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|..   +++|+|++|.||.
T Consensus       271 ~ql~~~---g~~H~D~hPgNil  289 (437)
T TIGR01982       271 NQVLRD---GFFHADLHPGNIF  289 (437)
T ss_pred             HHHHhC---CceeCCCCcccEE
Confidence            788884   6999999999984

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.94  E-value=4e-10  Score=111.46  Aligned_cols=129  Identities=15%  Similarity=0.077  Sum_probs=91.9

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeee--ecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVT--RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK--~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      ...++|.|+||.|+..............++.++  ...........+..|..+-..+.|+|++..+..+.+.  ....-+
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~--~~~~~~  399 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI--DGILQS  399 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc--ccchhh
Confidence            458899999998887776544432111112232  1111111122266788888889999998877666653  444445


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||++ +|+.++....   .+....+..++.|++.||.|||+.   +|.|||||++|++
T Consensus       400 mE~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll  452 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLL  452 (601)
T ss_pred             hhcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEE
Confidence            999999 9999998763   477888889999999999999995   6999999999974

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.82  E-value=2.2e-08  Score=86.47  Aligned_cols=109  Identities=20%  Similarity=0.261  Sum_probs=80.6

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--hhHhHHHHHHHHHhCCC--CCcceeeeEEEcCC-CCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GVKEFINDVNTLASLQH--PNLCKLLGFHARDG-SDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~~-~~~~~l  255 (316)
                      +.|+.|.++.||++...++..      +++|.......  ....+.+|+.++..+.+  .++.+++.+..... .+..++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~------~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~   77 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRR------LVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFY   77 (223)
T ss_pred             eecCCCccceEEEEEecCCcc------eEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceE
Confidence            578999999999998876332      66776653322  35678999999999975  44677777765421 125689


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      ||||++|++|.+.+..    ..++......++.+++++|.+||+
T Consensus        78 v~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          78 VMERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             EEEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            9999999888775532    137788888899999999999995

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.82  E-value=3.7e-09  Score=102.95  Aligned_cols=125  Identities=8%  Similarity=0.031  Sum_probs=72.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch-----------------------------------h
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-----------------------------------G  219 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----------------------------------~  219 (316)
                      .+|.. +.||.|++|.||+|++.+++.     .|+||...+...                                   .
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~-----~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~  193 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGR-----EVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEF  193 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCC-----EEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHH
Confidence            44665 789999999999999987333     377887753210                                   0


Q ss_pred             h------HhHHHHHHHHHhCC----CCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHH--HhcCCC-CCCCCHHHHHHH
Q 021173          220 V------KEFINDVNTLASLQ----HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRL--IYGRSD-GPPIDWNTRVKI  286 (316)
Q Consensus       220 ~------~~~~~E~~~l~~l~----HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~--L~~~~~-~~~l~~~~~~~i  286 (316)
                      .      -.|.+|+..+.++.    +.+.+.+-..+.+- ....+|||||++|+.|.++  +...+. ...+....+..+
T Consensus       194 ~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~  272 (537)
T PRK04750        194 EKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVF  272 (537)
T ss_pred             HHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHH
Confidence            0      12455555555542    33333332333321 2556899999999999774  322210 001222223333


Q ss_pred             HHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          287 ALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       287 a~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.|+       ..   .+++|+|++|.||.
T Consensus       273 ~~Qi-------f~---~GffHaDpHPGNIl  292 (537)
T PRK04750        273 FTQV-------FR---DGFFHADMHPGNIF  292 (537)
T ss_pred             HHHH-------Hh---CCeeeCCCChHHeE
Confidence            3333       33   26999999999984

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.75  E-value=1.4e-09  Score=109.92  Aligned_cols=128  Identities=15%  Similarity=0.064  Sum_probs=95.1

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC-CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++...+.||.+.|=+|.+|.++.|..+ .|  |-+|... -+-....+-+.|+. ...+++||.+.+.-+...+  ..-|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vV-vK--VFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~--kAAy   97 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVV-VK--VFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTD--KAAY   97 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEE-EE--EEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhh--HHHH
Confidence            466668999999999999998887632 11  2233321 12233344445555 5566899999987765553  6678


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||-+|+.+ +|+|.|..+.   .+...+..-|+.|++.||.-+|.   .+|+|+|||.+||+
T Consensus        98 lvRqyvkh-nLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENIL  152 (1431)
T KOG1240|consen   98 LVRQYVKH-NLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENIL  152 (1431)
T ss_pred             HHHHHHhh-hhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEE
Confidence            88899977 9999998763   46677777799999999999999   57999999999995

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.64  E-value=2e-07  Score=77.49  Aligned_cols=130  Identities=15%  Similarity=0.077  Sum_probs=90.4

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ...+|-+|+=+.|+++.+.+...++|.  -..|...-    ..-...+..+|+.+|.++.--.|.--.-++.+.  ..-.
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~--Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~--~~~~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKE--RFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDT--YGGQ   86 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEee--cccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEec--CCCe
Confidence            457899999999999999887643332  12222221    122346688999999998754554433344442  5567


Q ss_pred             EEEecCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+|||++| -++.+++.........+. ....++..|-+.|.-||.+   .|||+||-.+||.
T Consensus        87 i~ME~~~g~~~vk~~i~~~~~~~~~d~-~~~~~~~~iG~~igklH~n---diiHGDLTTSNil  145 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTMEDESEDE-GLAELARRIGELIGKLHDN---DIIHGDLTTSNIL  145 (229)
T ss_pred             EEEEeccchhHHHHHHHHHccCcccch-hHHHHHHHHHHHHHHhhhC---CeecccccccceE
Confidence            99999977 478888887543322332 3367889999999999996   6999999999984

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.64  E-value=4.3e-09  Score=101.07  Aligned_cols=125  Identities=16%  Similarity=0.121  Sum_probs=95.4

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeEEEEE
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      .+|+|.||.|+++.-..+..+...  +++|.+.+..   ........|..++..++ |+.+|++.-.+..+  ...++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~--yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~--~kl~l~l   76 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHL--YAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD--GKLYLIL   76 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccch--hhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc--cchhHhh
Confidence            368999999998765443332111  4555554211   11114567888899998 99999998777764  7899999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|..||+|...+....   .+++.....+...++.+++++|.   ..|+|||+|++||.
T Consensus        77 d~~rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enil  129 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVL  129 (612)
T ss_pred             hhcccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcch---hHHHHhccccccee
Confidence            9999999998887754   47778888888999999999999   47999999999984

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.63  E-value=1.6e-07  Score=80.10  Aligned_cols=79  Identities=6%  Similarity=0.023  Sum_probs=58.4

Q ss_pred             HHHHHHHhCC--CCCcceeeeEEEcCCCCeEEEEEecCCCCCHH-HHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH-Hhc
Q 021173          225 NDVNTLASLQ--HPNLCKLLGFHARDGSDQRMLIYERLFHGSLD-RLIYGRSDGPPIDWNTRVKIALCAAQGLTFL-HEE  300 (316)
Q Consensus       225 ~E~~~l~~l~--HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~-~~L~~~~~~~~l~~~~~~~ia~qia~gL~yL-H~~  300 (316)
                      +|...|.++.  .-++..++++      ..-+|||||+.++.+. ..|...    .++......+..+++.+|.+| |..
T Consensus        75 kE~r~L~rl~~~Gv~vP~pi~~------~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~  144 (197)
T cd05146          75 KEMHNLKRMQKAGIPCPEVVVL------KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC  144 (197)
T ss_pred             HHHHHHHHHHHcCCCCCeEEEe------cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC
Confidence            7999999985  4567777754      3458999999775442 223221    255566677889999999999 674


Q ss_pred             CCCCcEEeccCCCCCC
Q 021173          301 GPFQVIFYYFEMIKTE  316 (316)
Q Consensus       301 ~~~~IiHrDlKp~NI~  316 (316)
                         +|||+||++.||+
T Consensus       145 ---glVHGDLs~~NIL  157 (197)
T cd05146         145 ---NLVHADLSEYNML  157 (197)
T ss_pred             ---CeecCCCCHHHEE
Confidence               6999999999984

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.47  E-value=6.7e-07  Score=74.55  Aligned_cols=118  Identities=12%  Similarity=0.116  Sum_probs=80.5

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV  256 (316)
                      ..|++|+=+.||.+.+.+...+ .+. -.-|.-...    .-...+..+|+.++.++.--.|..-+=|..+  .+...|+
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av-~K~-Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~~~~I~   77 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAV-VKE-RIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PDNGLIV   77 (204)
T ss_pred             chhhCCcceeEEeeeccCcceE-EEe-ecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CCCCEEE
Confidence            4678999999999988665422 111 111111111    1123457889999999864444333333344  3677899


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      |||++|-.|.+.|...          ...++..|-.-+.-||.+   +|||+||-++||
T Consensus        78 me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNi  123 (204)
T COG3642          78 MEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNI  123 (204)
T ss_pred             EEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceE
Confidence            9999998898888764          245777888888899996   699999999997

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.38  E-value=6.6e-06  Score=73.73  Aligned_cols=125  Identities=12%  Similarity=0.022  Sum_probs=83.1

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc------------hhhHhHHHHHHHHHhCC--CCCcceeeeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS------------QGVKEFINDVNTLASLQ--HPNLCKLLGFHA  246 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~  246 (316)
                      +.+-+-....|++..+.+..       +.+|+.....            .....+.+|...+.+|.  .-....++++..
T Consensus        28 e~v~~~~~rrvvr~~~~g~~-------~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e  100 (268)
T PRK15123         28 EVFRELEGRRTLRFELAGKS-------YFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGE  100 (268)
T ss_pred             cEEecCCCceEEEEEECCEE-------EEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEE
Confidence            44444444556677665442       5666443211            11124779999998884  334455555654


Q ss_pred             cC--C-CCeEEEEEecCCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RD--G-SDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~--~-~~~~~lV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..  + ...-+||||++++- +|.+++.... ....+......++.+++..+.-||..   +|+|+||++.||+
T Consensus       101 ~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiL  170 (268)
T PRK15123        101 RGSNPATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFL  170 (268)
T ss_pred             ecCCCccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEE
Confidence            31  0 13578999999986 8999886422 12356667788999999999999995   6999999999984

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.34  E-value=2.7e-07  Score=88.48  Aligned_cols=130  Identities=15%  Similarity=0.007  Sum_probs=96.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEEC-CCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCC-CCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFG-DDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQ-HPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~-~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~  248 (316)
                      ..+|.....||.|.|+.||.+..+ .++.     .+++|.+....   .+...-+.|+-+...+. |.+++.++..|...
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~-----~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~  338 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDC-----IYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL  338 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCc-----eEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence            457888899999999999998866 3332     36777665321   11222345666666664 88888876655553


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +..||-.|||+++++...+...   ..+++..++.+..|++.++.++|+   +.++|+|+||+||.
T Consensus       339 --r~~~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~  398 (524)
T KOG0601|consen  339 --RQGYIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNIL  398 (524)
T ss_pred             --ccccCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhccccccc---hhhhccccccccee
Confidence              6677999999999987666332   248888999999999999999998   57999999999984

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.33  E-value=3.2e-06  Score=76.02  Aligned_cols=130  Identities=15%  Similarity=0.223  Sum_probs=79.4

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC----CCchhhHhHHHHHHHHHhCCC----------CCcceee
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN----PSSQGVKEFINDVNTLASLQH----------PNLCKLL  242 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~----~~~~~~~~~~~E~~~l~~l~H----------pnIv~l~  242 (316)
                      +..++.||.|+|+.||.+++..+++.     +++|...    ......+++.+|......+.+          -.++--+
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~-----~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~   88 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEE-----FAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL   88 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEE-----EEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S
T ss_pred             EEEccccccCCceEEEEEEEccCCce-----EEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee
Confidence            34558999999999999999998763     5555442    233456677777655555332          1122112


Q ss_pred             eEEEcC----------CCC-----eEEEEEecCCCCCHHHHHhc---CCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 021173          243 GFHARD----------GSD-----QRMLIYERLFHGSLDRLIYG---RSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPF  303 (316)
Q Consensus       243 g~~~~~----------~~~-----~~~lV~Ey~~~GsL~~~L~~---~~~-~~~l~~~~~~~ia~qia~gL~yLH~~~~~  303 (316)
                      +.....          +..     +.+++|+-+ -+||.+++..   ... ...+....++.+..|+++.+++||..   
T Consensus        89 d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---  164 (288)
T PF14531_consen   89 DLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---  164 (288)
T ss_dssp             EEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             EEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---
Confidence            211110          011     246788877 4588777553   221 11233445667779999999999995   


Q ss_pred             CcEEeccCCCCC
Q 021173          304 QVIFYYFEMIKT  315 (316)
Q Consensus       304 ~IiHrDlKp~NI  315 (316)
                      +|||+||||+|+
T Consensus       165 GlVHgdi~~~nf  176 (288)
T PF14531_consen  165 GLVHGDIKPENF  176 (288)
T ss_dssp             TEEEST-SGGGE
T ss_pred             ceEecccceeeE
Confidence            699999999997

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=98.21  E-value=2.7e-06  Score=81.52  Aligned_cols=80  Identities=21%  Similarity=0.296  Sum_probs=69.5

Q ss_pred             HHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 021173          230 LASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY  309 (316)
Q Consensus       230 l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrD  309 (316)
                      |+.+.|.|+.+++|.+.+.  ...++|.+||..|+|.+.+...  ...++|.-...++++|+.||.|||+.. . ..|+.
T Consensus         1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i-~~hg~   74 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHNSP-I-GYHGA   74 (484)
T ss_pred             CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhcCc-c-eeeee
Confidence            4568899999999999985  8899999999999999999874  335899999999999999999999952 1 29999


Q ss_pred             cCCCCC
Q 021173          310 FEMIKT  315 (316)
Q Consensus       310 lKp~NI  315 (316)
                      |+..|-
T Consensus        75 l~s~nC   80 (484)
T KOG1023|consen   75 LKSSNC   80 (484)
T ss_pred             eccccc
Confidence            999884

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.14  E-value=1.2e-06  Score=78.66  Aligned_cols=85  Identities=20%  Similarity=0.260  Sum_probs=67.9

Q ss_pred             HHHhCCCCCcceeeeEEEcC---CCCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 021173          229 TLASLQHPNLCKLLGFHARD---GSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQ  304 (316)
Q Consensus       229 ~l~~l~HpnIv~l~g~~~~~---~~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~  304 (316)
                      .|-.+.|-|||+++.||.+.   +.....++.|||..|+|..+|++.. ....+....-.+|+.||+.||.|||+..+ .
T Consensus       120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P-p  198 (458)
T KOG1266|consen  120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP-P  198 (458)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC-c
Confidence            45556799999999998763   2356789999999999999999743 23346666777899999999999999875 8


Q ss_pred             cEEeccCCCC
Q 021173          305 VIFYYFEMIK  314 (316)
Q Consensus       305 IiHrDlKp~N  314 (316)
                      |+|+++-..-
T Consensus       199 iihgnlTc~t  208 (458)
T KOG1266|consen  199 IIHGNLTCDT  208 (458)
T ss_pred             cccCCcchhh
Confidence            9999986543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.08  E-value=6.6e-05  Score=64.65  Aligned_cols=91  Identities=15%  Similarity=0.096  Sum_probs=69.4

Q ss_pred             hHhHHHHHHHHHhCC--CCCcceeeeEEEcCC--CCeEEEEEecCCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH
Q 021173          220 VKEFINDVNTLASLQ--HPNLCKLLGFHARDG--SDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGL  294 (316)
Q Consensus       220 ~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~--~~~~~lV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~ia~qia~gL  294 (316)
                      .....+|...+..|.  .-.+...+++.....  ....+||+|++++. +|.+++....   .++......++.+++..+
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i  131 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLI  131 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHH
Confidence            345788888888885  444566676665421  13458999999984 7999988743   156667788999999999


Q ss_pred             HHHHhcCCCCcEEeccCCCCCC
Q 021173          295 TFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       295 ~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .-||.+   +|+|+|+++.||+
T Consensus       132 ~~lH~~---gi~H~Dl~~~NIL  150 (206)
T PF06293_consen  132 AKLHDA---GIYHGDLNPSNIL  150 (206)
T ss_pred             HHHHHC---cCCCCCCCcccEE
Confidence            999995   6999999999985

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.07  E-value=6.5e-07  Score=88.86  Aligned_cols=129  Identities=17%  Similarity=0.134  Sum_probs=96.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+|+.|-.........    ..+++|.+...   .........|..+-..+. |.|++.+++....  .+.
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~----~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~--~~~   95 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPE----SSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS--PRS   95 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCc----ceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCC--Ccc
Confidence            4444669999999998887755443    23566655532   223334445777777776 9999999998877  488


Q ss_pred             EEEEEecCCCCCHHHHH-hcCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLI-YGRSDGPPIDWNTRVKIALCAAQGLTFLH-EEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L-~~~~~~~~l~~~~~~~ia~qia~gL~yLH-~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++++|..+|++++.+ ....  ..++....-.+..|+..+|.|+| ..   ++.||||||+|..
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~  156 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSL  156 (601)
T ss_pred             cccccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccch
Confidence            99999999999999988 4332  13566667789999999999999 63   6999999999863

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.94  E-value=2.5e-05  Score=66.21  Aligned_cols=81  Identities=10%  Similarity=0.040  Sum_probs=51.3

Q ss_pred             hHHHHHHHHHhCCCC--CcceeeeEEEcCCCCeEEEEEecCC--CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 021173          222 EFINDVNTLASLQHP--NLCKLLGFHARDGSDQRMLIYERLF--HGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL  297 (316)
Q Consensus       222 ~~~~E~~~l~~l~Hp--nIv~l~g~~~~~~~~~~~lV~Ey~~--~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yL  297 (316)
                      ...+|...|.++..-  ++.+++.+.      .-+|||||+.  |..+..+....     ++......++.+++..+..+
T Consensus        54 ~~~~E~~~L~~l~~~Gv~vP~p~~~~------~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~  122 (188)
T PF01163_consen   54 WAKKEFRNLKRLYEAGVPVPKPYDYN------RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKM  122 (188)
T ss_dssp             HHHHHHHHHHHCCCTT-SS--EEEEE------TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCccCCcEEEEe------CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHH
Confidence            367899999999754  566776542      2379999998  54554433322     22334556777888866665


Q ss_pred             -HhcCCCCcEEeccCCCCCC
Q 021173          298 -HEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       298 -H~~~~~~IiHrDlKp~NI~  316 (316)
                       |.   .+|||+||.+.||+
T Consensus       123 ~~~---~givHGDLs~~NIl  139 (188)
T PF01163_consen  123 LHK---AGIVHGDLSEYNIL  139 (188)
T ss_dssp             HHC---TTEEESS-STTSEE
T ss_pred             HHh---cCceecCCChhhEE
Confidence             56   47999999999984

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=97.91  E-value=7.2e-05  Score=71.35  Aligned_cols=119  Identities=15%  Similarity=0.150  Sum_probs=83.8

Q ss_pred             eEEEEEEECCCCceeEEEEEeeeecCCCchh-hHhHHHHHHHHHhCCCCCcceeeeEEEcC--CCCeEEEEEecCCC-CC
Q 021173          189 SVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLCKLLGFHARD--GSDQRMLIYERLFH-GS  264 (316)
Q Consensus       189 g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~~~lV~Ey~~~-Gs  264 (316)
                      .+.|+++..-++.     .+.+|+++..... ......-++.++++.|.|||.|..++...  +...++|||+|.++ ++
T Consensus       290 ~Ttyk~~s~~DG~-----~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T  364 (655)
T KOG3741|consen  290 ITTYKATSNVDGN-----AYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT  364 (655)
T ss_pred             ceeEeeeeccCCc-----eeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence            5678888754444     2888888543222 12234457889999999999999887632  12568999999986 57


Q ss_pred             HHHHHhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          265 LDRLIYGRS------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       265 L~~~L~~~~------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      |.++.....            .+...++..++.|+.|++.||.++|+.|   ..-+-|-+.+|
T Consensus       365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kI  424 (655)
T KOG3741|consen  365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKI  424 (655)
T ss_pred             HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHe
Confidence            887765432            1234678899999999999999999975   44465655555

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.90  E-value=3.6e-05  Score=75.24  Aligned_cols=81  Identities=17%  Similarity=0.196  Sum_probs=65.3

Q ss_pred             HhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 021173          221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE  300 (316)
Q Consensus       221 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~  300 (316)
                      ....+-+.-|+.++||||++++..+..+  +.+|||+|.+.  -|..+|....      .......+.||+.||.|||+.
T Consensus        54 ~~~~~A~k~lKtlRHP~Il~yL~t~e~~--~~~ylvTErV~--Pl~~~lk~l~------~~~v~~Gl~qIl~AL~FL~~d  123 (690)
T KOG1243|consen   54 ELAKRAVKRLKTLRHPNILSYLDTTEEE--GTLYLVTERVR--PLETVLKELG------KEEVCLGLFQILAALSFLNDD  123 (690)
T ss_pred             HHHHHHHHHhhhccCchhhhhhhhhccc--CceEEEeeccc--cHHHHHHHhH------HHHHHHHHHHHHHHHHHHhcc
Confidence            3456677889999999999999988875  78999999884  5777777642      345555789999999999987


Q ss_pred             CCCCcEEeccCCC
Q 021173          301 GPFQVIFYYFEMI  313 (316)
Q Consensus       301 ~~~~IiHrDlKp~  313 (316)
                      +  +++|++|.-+
T Consensus       124 ~--~lvHgNv~~~  134 (690)
T KOG1243|consen  124 C--NLVHGNVCKD  134 (690)
T ss_pred             C--CeeeccEeee
Confidence            4  7999998755

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.79  E-value=9.7e-05  Score=71.21  Aligned_cols=127  Identities=11%  Similarity=0.021  Sum_probs=94.2

Q ss_pred             CCCcceeee--cCceEEEEEEE--CCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcC
Q 021173          177 FFSDRCISE--GLSSVMYRASF--GDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARD  248 (316)
Q Consensus       177 f~~~~~IG~--G~fg~Vy~~~~--~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~  248 (316)
                      |.....+|.  |.+|.||.+..  .....     .+++|.-+.   .......=.+|+....+++ |.|.++.+..+.. 
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~-----~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~-  189 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPH-----KFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG-  189 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCc-----ccccccccCCCCCccccccccchhhcccccCccccccccCccccc-
Confidence            455588999  99999999987  33332     256665331   2223334457777777775 9999997777766 


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ----GLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~----gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       .+..++-+|+|. .+|..+.+...  ..++......+..+..+    ||.++|..   .|+|-|+||.||.
T Consensus       190 -~~~lfiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~  254 (524)
T KOG0601|consen  190 -SGILFIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIF  254 (524)
T ss_pred             -CCcceeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhhee
Confidence             588899999885 68888887753  24677777788888888    99999995   7999999999983

>PRK09902 hypothetical protein; Provisional

Probab=97.71  E-value=0.00064  Score=58.45  Aligned_cols=122  Identities=14%  Similarity=0.088  Sum_probs=85.9

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCC----C---chhhHhHHHHHHHHHhCC--CCCcceeeeEEEc---CCC
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----S---SQGVKEFINDVNTLASLQ--HPNLCKLLGFHAR---DGS  250 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~---~~~  250 (316)
                      -|+|+-+-|++-.+.+..       +-+|+-..    +   ..+...|.+|...|..|.  .-.+...+ ++..   ...
T Consensus        26 ~~rgG~SgV~r~~~~g~~-------~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~   97 (216)
T PRK09902         26 YRRNGMSGVQCVERNGKK-------LYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGE   97 (216)
T ss_pred             cCCCCcceEEEEEeCCcE-------EEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCc
Confidence            456888889987776652       45554431    1   335678999999999995  33455554 3321   112


Q ss_pred             CeEEEEEecCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      -.-+||+|-+.| -+|.+++.... -...+......+..+|+..|.-||+.   ++.|+|+-+.||+
T Consensus        98 ~rA~LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIl  160 (216)
T PRK09902         98 WRALLVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIY  160 (216)
T ss_pred             eEEEEEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhhee
Confidence            345799997764 48988886643 12457777788999999999999995   6999999999984

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.70  E-value=0.0005  Score=58.78  Aligned_cols=117  Identities=10%  Similarity=0.151  Sum_probs=78.0

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-----------------hhhHhHHHHHHHHHhCC------C
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-----------------QGVKEFINDVNTLASLQ------H  235 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------------~~~~~~~~E~~~l~~l~------H  235 (316)
                      ....||+|+.-.||.--...+        ..||.+....                 ...+++.+|+.....+.      +
T Consensus         5 ~~~~i~~G~~R~cy~HP~dp~--------~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~   76 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPDDPN--------LCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDW   76 (199)
T ss_pred             CCcccccCCCceEEECCCCCC--------eEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcc
Confidence            347899999999996443333        3444443222                 23466777877666665      8


Q ss_pred             CCcceeeeEEEcCCCCeEEEEEecCCC--C----CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 021173          236 PNLCKLLGFHARDGSDQRMLIYERLFH--G----SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY  309 (316)
Q Consensus       236 pnIv~l~g~~~~~~~~~~~lV~Ey~~~--G----sL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrD  309 (316)
                      .+|.+++|+..++  ...-+|+|.+.+  |    +|.+++....    ++. .....   +-+-.+||-.+   +|+.+|
T Consensus        77 ~~i~r~~G~veT~--~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~~~~~---L~~f~~~l~~~---~Iv~~d  143 (199)
T PF10707_consen   77 SHIPRFYGFVETN--LGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-ELRQA---LDEFKRYLLDH---HIVIRD  143 (199)
T ss_pred             cccccEeEEEecC--CceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-HHHHH---HHHHHHHHHHc---CCeecC
Confidence            8899999999885  667888887643  2    6888886543    555 33333   33344566664   699999


Q ss_pred             cCCCCCC
Q 021173          310 FEMIKTE  316 (316)
Q Consensus       310 lKp~NI~  316 (316)
                      |+|.||.
T Consensus       144 l~~~NIv  150 (199)
T PF10707_consen  144 LNPHNIV  150 (199)
T ss_pred             CCcccEE
Confidence            9999984

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.68  E-value=0.00011  Score=62.30  Aligned_cols=87  Identities=25%  Similarity=0.113  Sum_probs=65.4

Q ss_pred             HHHHHHHHhCCC-CCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 021173          224 INDVNTLASLQH-PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP  302 (316)
Q Consensus       224 ~~E~~~l~~l~H-pnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~  302 (316)
                      .+|..+|+.+++ +++.+++|+|-.      ++|.||...+++......-..-..-+|..+.+||.++++.+++|++.-.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~------~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~   80 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR------FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPL   80 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC------EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence            468888999975 699999999943      6789999887765321000001136899999999999999999998544


Q ss_pred             CCcEEeccCCCCCC
Q 021173          303 FQVIFYYFEMIKTE  316 (316)
Q Consensus       303 ~~IiHrDlKp~NI~  316 (316)
                      ..+.-.|++++|+.
T Consensus        81 ~~~~lcDv~~~nfg   94 (188)
T PF12260_consen   81 GFFYLCDVSPDNFG   94 (188)
T ss_pred             CcEEEeecchHHeE
Confidence            35677999999974

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.60  E-value=2.2e-05  Score=74.55  Aligned_cols=59  Identities=10%  Similarity=0.048  Sum_probs=52.5

Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      ..+||.|++|.-.+|.+||.++.....-++...+.++.|++.|++|   +   +.||||+||.||
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~ni  387 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNI  387 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhcccccc
Confidence            3588999999999999999876656678899999999999999999   3   479999999998

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.55  E-value=0.00027  Score=62.57  Aligned_cols=116  Identities=14%  Similarity=0.003  Sum_probs=74.6

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---------------------Cc--hhhHhHHHHHHHHHhCC
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---------------------SS--QGVKEFINDVNTLASLQ  234 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---------------------~~--~~~~~~~~E~~~l~~l~  234 (316)
                      ..+..||-|.=+.||.|....+..      +++|.-..                     +.  .......+|.++|.+|.
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~------~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~  167 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRK------VAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLY  167 (304)
T ss_pred             hhccccccCccceEEEEECCCCCE------EEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhh
Confidence            445899999999999999987765      45553221                     00  11233578999999997


Q ss_pred             CC--CcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCC
Q 021173          235 HP--NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEM  312 (316)
Q Consensus       235 Hp--nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp  312 (316)
                      -.  .+.+.+++      +..++||||++|-.|...--        +-...-.|+..|++-+.-+-.   .+|||+|+..
T Consensus       168 ~~G~~VP~P~~~------nRHaVvMe~ieG~eL~~~r~--------~~en~~~il~~il~~~~~~~~---~GiVHGDlSe  230 (304)
T COG0478         168 PEGVKVPKPIAW------NRHAVVMEYIEGVELYRLRL--------DVENPDEILDKILEEVRKAYR---RGIVHGDLSE  230 (304)
T ss_pred             hcCCCCCCcccc------ccceeeeehcccceeecccC--------cccCHHHHHHHHHHHHHHHHH---cCccccCCch
Confidence            44  77777664      56789999999866654321        112222333344444433334   3799999999


Q ss_pred             CCCC
Q 021173          313 IKTE  316 (316)
Q Consensus       313 ~NI~  316 (316)
                      =||.
T Consensus       231 fNIl  234 (304)
T COG0478         231 FNIL  234 (304)
T ss_pred             heEE
Confidence            9984

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.49  E-value=9.7e-05  Score=75.56  Aligned_cols=93  Identities=15%  Similarity=0.291  Sum_probs=58.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      .+|...+.|..|+||.||..+++.+..     .+++| +++...          ||+     ||..+    .    +..+
T Consensus        83 ~df~~IklisngAygavylvrh~~trq-----rfa~k-iNkq~l----------ilR-----nilt~----a----~npf  133 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQ-----RFAMK-INKQNL----------ILR-----NILTF----A----GNPF  133 (1205)
T ss_pred             cccceeEeeccCCCCceeeeecccccc-----chhhc-ccccch----------hhh-----ccccc----c----CCcc
Confidence            467777999999999999998876553     25553 221111          111     22222    1    3333


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .|      ||-...+..-+   .++-.        .+.+++|||+   .+|+|||+||+|.+
T Consensus       134 vv------gDc~tllk~~g---~lPvd--------mvla~Eylh~---ygivhrdlkpdnll  175 (1205)
T KOG0606|consen  134 VV------GDCATLLKNIG---PLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLL  175 (1205)
T ss_pred             ee------chhhhhcccCC---CCcch--------hhHHhHhhcc---CCeecCCCCCCcce
Confidence            44      56666665432   23322        2788999999   47999999999974

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.23  E-value=0.0049  Score=53.83  Aligned_cols=72  Identities=13%  Similarity=0.099  Sum_probs=48.6

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC--cceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ..||+|..+.||+..  ++ .      +.+|..... .......+|.++++.+..-.  +.+.+++...  .+...+|||
T Consensus         7 ~~i~~G~t~~~y~~~--~~-~------~VlR~~~~~-~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~--~~~~glv~e   74 (226)
T TIGR02172         7 TQTGEGGNGESYTHK--TG-K------WMLKLYNPG-FDKETIKREFDASRKVFSLGIPTPHPFDLVED--GGRLGLIYE   74 (226)
T ss_pred             eeecCCCCcceeEec--CC-C------EEEEeCCCC-CCHHHHHHHHHHHHHHHHcCCCCCceEEEEec--CCeeeeeee
Confidence            678999999999842  22 2      445554432 23345688999999886433  4566776655  366789999


Q ss_pred             cCCCCC
Q 021173          259 RLFHGS  264 (316)
Q Consensus       259 y~~~Gs  264 (316)
                      |++|.+
T Consensus        75 ~i~G~~   80 (226)
T TIGR02172        75 LIVGKR   80 (226)
T ss_pred             ecCCcc
Confidence            999863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.13  E-value=0.0032  Score=61.42  Aligned_cols=117  Identities=14%  Similarity=0.041  Sum_probs=72.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh--------------------------------------hHh
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG--------------------------------------VKE  222 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--------------------------------------~~~  222 (316)
                      +-||.-+.|.||+++++++..      |+||.-++.-..                                      .-.
T Consensus       167 ~piaaASlaQVhrA~L~~G~~------VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELD  240 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGED------VAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELD  240 (538)
T ss_pred             chhhhcchhheEEEEecCCCE------EEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcc
Confidence            678999999999999999764      677755432110                                      012


Q ss_pred             HHHHHHHHHhC----CCCC------cceeeeEEEcCCCCeEEEEEecCCCCCHHH--HHhcCCCCCCCCHHHHHHHHHHH
Q 021173          223 FINDVNTLASL----QHPN------LCKLLGFHARDGSDQRMLIYERLFHGSLDR--LIYGRSDGPPIDWNTRVKIALCA  290 (316)
Q Consensus       223 ~~~E~~~l~~l----~Hpn------Iv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~--~L~~~~~~~~l~~~~~~~ia~qi  290 (316)
                      |.+|.+...++    .|-+      |.++|..+    .....|+||||+|.-+.+  .|...+    ++...+...+.++
T Consensus       241 F~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~----st~RVLtME~~~G~~i~Dl~~i~~~g----i~~~~i~~~l~~~  312 (538)
T KOG1235|consen  241 FTKEAKNAERFRENFKDFSLLTYVLVPKVYWDL----STKRVLTMEYVDGIKINDLDAIDKRG----ISPHDILNKLVEA  312 (538)
T ss_pred             hHHHHHhHHHHHHHHHhcccccceeCCeehhhc----CcceEEEEEecCCccCCCHHHHHHcC----CCHHHHHHHHHHH
Confidence            45565543333    3444      44444333    256799999999986644  444443    6666555554444


Q ss_pred             HHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          291 AQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       291 a~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..-+-+.|     +++|.|--|.||+
T Consensus       313 ~~~qIf~~-----GffHaDPHPGNil  333 (538)
T KOG1235|consen  313 YLEQIFKT-----GFFHADPHPGNIL  333 (538)
T ss_pred             HHHHHHhc-----CCccCCCCCCcEE
Confidence            33333333     5899999999985

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.07  E-value=0.0034  Score=61.25  Aligned_cols=121  Identities=12%  Similarity=0.051  Sum_probs=71.6

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh-------------------------------h---------
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-------------------------------V---------  220 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------------~---------  220 (316)
                      .-|+.++.|.||+|++.++..      ||||...+.-..                               .         
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~------VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~  204 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEE------VAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE  204 (517)
T ss_pred             CchhhhhHhhheeEEecCCCE------EEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence            678999999999999998764      888877642110                               0         


Q ss_pred             -HhHHHHHHHHHhCC-----CCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH
Q 021173          221 -KEFINDVNTLASLQ-----HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL  294 (316)
Q Consensus       221 -~~~~~E~~~l~~l~-----HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL  294 (316)
                       -.|.+|...+.++.     .++|.-- ..|++- .....|+|||++|-.+.+...-...  .++...+.....++.--.
T Consensus       205 ElDy~~EA~n~~~~~~nf~~~~~v~VP-~V~we~-t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~ia~~~~~~f~~q  280 (517)
T COG0661         205 ELDYRREAANAERFRENFKDDPDVYVP-KVYWEY-TTRRVLTMEWIDGIKISDIAALKSA--GIDRKELAELLVRAFLRQ  280 (517)
T ss_pred             HhCHHHHHHHHHHHHHHcCCCCCeEec-eeehhc-cCCcEEEEEeeCCEecccHHHHHhc--CCCHHHHHHHHHHHHHHH
Confidence             01445665555552     3333211 122221 2567899999999888777432211  266444433333322222


Q ss_pred             HHHHhcCCCCcEEeccCCCCCC
Q 021173          295 TFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       295 ~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      -+-|     +++|.|.-|.||+
T Consensus       281 ~~~d-----gffHaDpHpGNi~  297 (517)
T COG0661         281 LLRD-----GFFHADPHPGNIL  297 (517)
T ss_pred             HHhc-----CccccCCCccceE
Confidence            2222     5899999999985

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.05  E-value=0.0024  Score=53.21  Aligned_cols=77  Identities=12%  Similarity=0.198  Sum_probs=56.8

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcce-eeeEEEcCCCCeEEEEEe
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK-LLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~-l~g~~~~~~~~~~~lV~E  258 (316)
                      .+.|++|.+|.||+|.|.+..       +++|.-. .......+..|+++|..+.-.++-. +|.|-.      -++.||
T Consensus        27 ~~~L~KG~~s~Vyl~~~~~~~-------~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~------~~i~me   92 (201)
T COG2112          27 EKELAKGTTSVVYLGEWRGGE-------VALKVRR-RDSPRRNLEKEAKILEILAGEGVTPEVYFYGE------DFIRME   92 (201)
T ss_pred             hhhhhcccccEEEEeeccCce-------EEEEEec-CCcchhhHHHHHHHHHHhhhcCCCceEEEech------hhhhhh
Confidence            378999999999999999874       5555443 3344567899999999998766654 554432      345699


Q ss_pred             cCCCCCHHHHHh
Q 021173          259 RLFHGSLDRLIY  270 (316)
Q Consensus       259 y~~~GsL~~~L~  270 (316)
                      |+.|-.|.++-.
T Consensus        93 ~i~G~~L~~~~~  104 (201)
T COG2112          93 YIDGRPLGKLEI  104 (201)
T ss_pred             hhcCcchhhhhh
Confidence            999988877654

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.02  E-value=0.014  Score=49.87  Aligned_cols=125  Identities=10%  Similarity=0.130  Sum_probs=84.6

Q ss_pred             CCccccCHHHHHHHhCCCCCcceeeecCc-eEEEEEEECCCCceeEEEEEeeeecCC-----C----------c------
Q 021173          160 GTLRNFPLDEVAAACHNFFSDRCISEGLS-SVMYRASFGDDASTSKKFEATVTRLNP-----S----------S------  217 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~~~IG~G~f-g~Vy~~~~~~~~~~~~~~~vavK~~~~-----~----------~------  217 (316)
                      +....|+..     +.+|+..+.||.|.- |.||++...+..       +|+|....     .          .      
T Consensus        27 PKL~~F~~h-----~~~I~flefLg~g~~~~~V~kv~I~g~~-------YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~   94 (207)
T PF13095_consen   27 PKLEPFTHH-----GDDIEFLEFLGHGSHDGYVFKVEIDGRI-------YALKLFRFWDYTEPDYTRERFAGHETSLSTP   94 (207)
T ss_pred             CCcCCcCCC-----CCcEeeeeecCCCCceeEEEEEEECCeE-------EEEEEeeccccCCCccccccccccccccchh
Confidence            455556651     267778899999999 999999988764       67776210     0          0      


Q ss_pred             -hhhHhHHHHHHHHHhCC---CCCc--ceeeeEEEcCC----------------CCeEEEEEecCCCCCHHHHHhcCCCC
Q 021173          218 -QGVKEFINDVNTLASLQ---HPNL--CKLLGFHARDG----------------SDQRMLIYERLFHGSLDRLIYGRSDG  275 (316)
Q Consensus       218 -~~~~~~~~E~~~l~~l~---HpnI--v~l~g~~~~~~----------------~~~~~lV~Ey~~~GsL~~~L~~~~~~  275 (316)
                       ....-|..|.+...+|+   +.++  |+.+||..-..                .....||.||+....           
T Consensus        95 ~~y~~PF~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------  163 (207)
T PF13095_consen   95 AHYADPFNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------  163 (207)
T ss_pred             hhhcChHHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------
Confidence             11234888999888885   4456  89999984320                112467888776643           


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          276 PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       276 ~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                       .+.    ..-+.++.+-|..+|..   +|+=+|+++.|.
T Consensus       164 -~~~----~~~~~~~~~dl~~~~k~---gI~~~Dv~~~ny  195 (207)
T PF13095_consen  164 -PLQ----IRDIPQMLRDLKILHKL---GIVPRDVKPRNY  195 (207)
T ss_pred             -ccc----hhHHHHHHHHHHHHHHC---CeeeccCccccc
Confidence             011    22345677788889994   699999999985

>PRK10593 hypothetical protein; Provisional

Probab=96.95  E-value=0.01  Score=54.06  Aligned_cols=106  Identities=15%  Similarity=0.087  Sum_probs=69.5

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC---CCcceeeeEEEcCC-CCeE
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH---PNLCKLLGFHARDG-SDQR  253 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~~~~-~~~~  253 (316)
                      ...+.||.|..+.||.....++.       +.+|..+ .......|.+|.+.|+.|.-   ..+.+++++|..+. .+..
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~~-------~~~k~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~   88 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQGN-------PMPLMAR-SFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPD   88 (297)
T ss_pred             heeeecCCccceeEEEEEcCCCC-------EEEEEec-ccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCe
Confidence            34478999999999998766553       3334422 21123578899999999853   46788888876421 2558


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      +||||+++++++.+. .       ........+..+++++|.-||.
T Consensus        89 ~LVmE~i~G~~~~~~-~-------~~~~~~~~l~~~l~~~La~LH~  126 (297)
T PRK10593         89 VLLLERLRGVSVEAP-A-------RTPERWEQLKDQIVEGLLAWHR  126 (297)
T ss_pred             EEEEeccCCEecCCC-C-------CCHHHHHHHHHHHHHHHHHHhC
Confidence            999999999877541 0       1222333455566667776775

>PLN02876 acyl-CoA dehydrogenase

Probab=96.93  E-value=0.0055  Score=63.67  Aligned_cols=112  Identities=19%  Similarity=0.195  Sum_probs=74.2

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCC-CCCc--ceeeeEEEcCC-CCeE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQ-HPNL--CKLLGFHARDG-SDQR  253 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-HpnI--v~l~g~~~~~~-~~~~  253 (316)
                      ...++.|.+..+|+..+.++... .  .+++|+.....  .....+.+|..+|+.+. |.+|  .+++++|.+.. -+..
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~-~--~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~  119 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSV-K--RYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA  119 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcc-e--eEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence            46788999999999887654311 1  14455443211  22346889999999996 6665  77888876531 1457


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      |+||||++|..+.+.   .  -..++...+..++.+++++|..||.
T Consensus       120 flVME~v~G~~~~~~---~--~~~~~~~~r~~l~~~l~~~La~LH~  160 (822)
T PLN02876        120 FYIMEYLEGRIFVDP---K--LPGVAPERRRAIYRATAKVLAALHS  160 (822)
T ss_pred             eEEEEecCCcccCCc---c--CCCCCHHHHHHHHHHHHHHHHHHhC
Confidence            899999998544321   0  1125566777788888888888886

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=96.76  E-value=0.019  Score=49.28  Aligned_cols=103  Identities=20%  Similarity=0.303  Sum_probs=73.1

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC--CcceeeeEEEcCC-CCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP--NLCKLLGFHARDG-SDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp--nIv~l~g~~~~~~-~~~~~lV~  257 (316)
                      +.|+.|..+.||+....++ .      +++|..... .....+.+|..++..+...  .+..++.++.... ....+++|
T Consensus         3 ~~l~~G~~n~~~~v~~~~~-~------~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~   74 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDDG-R------YVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM   74 (239)
T ss_dssp             EEEEESSSSEEEEEEETTS-E------EEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred             ccCCCCCeeeEEEEEECCc-E------EEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence            5789999999999998884 2      677776543 4566788999998888533  3556776543321 24579999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE  300 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~  300 (316)
                      +|++|..+..         ..+......++.++++.|.-||..
T Consensus        75 ~~i~g~~~~~---------~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   75 EYIPGRPLDD---------ELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             EEESSEEHHH---------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEeccccccc---------cccccccccccccchhhhhhcccc
Confidence            9999988877         145566677777788888888764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.56  E-value=0.022  Score=49.32  Aligned_cols=122  Identities=8%  Similarity=-0.003  Sum_probs=68.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch-hhHh---------HHHHHHHHHhCC---CCCcce
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-GVKE---------FINDVNTLASLQ---HPNLCK  240 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~---------~~~E~~~l~~l~---HpnIv~  240 (316)
                      .++|...+++-......|.+-...++.       +.+|....... ..+.         ..+++..+..+.   --.+..
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei~~~k-------yIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~  102 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEIDGKK-------YILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPAD  102 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEECCcE-------EEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccc
Confidence            455666666666666666666555543       55555442111 1111         223334344442   222223


Q ss_pred             eeeEEEcC---CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 LLGFHARD---GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 l~g~~~~~---~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++.....-   -....+|||||++|-.|.++..       ++.    .++..+.++|.-||..   ++.|+|..|.|+.
T Consensus       103 ~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFl  167 (229)
T PF06176_consen  103 PYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFL  167 (229)
T ss_pred             ceeeeeeeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEE
Confidence            22222210   0145679999999988876532       222    2445677889999995   6899999999973

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.24  E-value=0.021  Score=50.24  Aligned_cols=134  Identities=13%  Similarity=0.089  Sum_probs=80.4

Q ss_pred             cCHHHHHHHhCCCCCcc---eeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh----------hH----------
Q 021173          165 FPLDEVAAACHNFFSDR---CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG----------VK----------  221 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~---~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~----------~~----------  221 (316)
                      .+++.+....+...+..   +|.+|.-+.||+|...++..      +|+|+.......          ..          
T Consensus        35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~------~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr  108 (268)
T COG1718          35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRY------VAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRR  108 (268)
T ss_pred             HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCce------EEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHH
Confidence            45556665555555444   45567778899998755543      666655421111          01          


Q ss_pred             -----hHHHHHHHHHhCC--CCCcceeeeEEEcCCCCeEEEEEecCCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 021173          222 -----EFINDVNTLASLQ--HPNLCKLLGFHARDGSDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQG  293 (316)
Q Consensus       222 -----~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~~~~lV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~ia~qia~g  293 (316)
                           -..+|..-|.++.  +-.+.+-+++.      .-.|||||+... .-.=.|..-    .+.......+..++++.
T Consensus       109 ~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~~------~nVLvMEfIg~~g~pAP~LkDv----~~e~~e~~~~~~~~v~~  178 (268)
T COG1718         109 KLVFAWARKEFRNLKRAYEAGVRVPEPIAFR------NNVLVMEFIGDDGLPAPRLKDV----PLELEEAEGLYEDVVEY  178 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCCceeec------CCeEEEEeccCCCCCCCCcccC----CcCchhHHHHHHHHHHH
Confidence                 1245777777773  55666666553      347999999653 111122221    13333566677788888


Q ss_pred             HHHHHhcCCCCcEEeccCCCCCC
Q 021173          294 LTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       294 L~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.-|-..  .++||+||..=||+
T Consensus       179 ~~~l~~~--a~LVHgDLSEyNiL  199 (268)
T COG1718         179 MRRLYKE--AGLVHGDLSEYNIL  199 (268)
T ss_pred             HHHHHHh--cCcccccchhhheE
Confidence            8877774  26999999988874

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.75  E-value=0.081  Score=46.36  Aligned_cols=76  Identities=14%  Similarity=0.176  Sum_probs=50.8

Q ss_pred             eeeecCc-eEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeEEEEEec
Q 021173          182 CISEGLS-SVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       182 ~IG~G~f-g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      .|-.|.. ..||+....+ ..      +.+|......  ...+.+|+.++..+. +--+.+++++....  +..+|||||
T Consensus         5 ~~~~g~~~~~v~~~~~~~-~~------~~vk~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~--~~~~lv~e~   73 (244)
T cd05150           5 RVTEGQSGATVYRLDGKN-PG------LYLKIAPSGP--TYELEREAERLRWLAGKLPVPEVIDYGSDD--GRAWLLTSA   73 (244)
T ss_pred             ecCCCCCcCeEEEEcCCC-Cc------EEEEecCCCc--ccchHHHHHHHHHHHhcCCCCeEEEEEecC--CccEEEEEe
Confidence            3445555 7889887654 22      5666655332  345778999988885 44455777766553  567899999


Q ss_pred             CCCCCHHHH
Q 021173          260 LFHGSLDRL  268 (316)
Q Consensus       260 ~~~GsL~~~  268 (316)
                      ++|.+|...
T Consensus        74 i~G~~l~~~   82 (244)
T cd05150          74 VPGVPAAAL   82 (244)
T ss_pred             eCCccHhHh
Confidence            999877643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=95.70  E-value=0.0017  Score=66.86  Aligned_cols=77  Identities=13%  Similarity=0.008  Sum_probs=57.1

Q ss_pred             hCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccC
Q 021173          232 SLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE  311 (316)
Q Consensus       232 ~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlK  311 (316)
                      ..++|-++...--+..  ....+||++|+.+++|...|+...   ..+.+-...+...+.++++|||..   .++|||++
T Consensus       860 ~p~~P~v~~~~~s~~~--rsP~~L~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~  931 (1205)
T KOG0606|consen  860 TPRSPAVVRSFPSFPC--RSPLPLVGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSS---LRKHRDLK  931 (1205)
T ss_pred             cCCCCceecccCCCCC--CCCcchhhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccc---hhhccccc
Confidence            3445555554333222  477899999999999999999764   355555556677889999999993   58999999


Q ss_pred             CCCCC
Q 021173          312 MIKTE  316 (316)
Q Consensus       312 p~NI~  316 (316)
                      |.|++
T Consensus       932 p~~~l  936 (1205)
T KOG0606|consen  932 PDSLL  936 (1205)
T ss_pred             ccchh
Confidence            99864

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.66  E-value=0.057  Score=47.19  Aligned_cols=74  Identities=14%  Similarity=0.081  Sum_probs=43.0

Q ss_pred             ceeeecCce-EEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC---CcceeeeEEEcCC-CCeEEE
Q 021173          181 RCISEGLSS-VMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP---NLCKLLGFHARDG-SDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg-~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~g~~~~~~-~~~~~l  255 (316)
                      +.|+.|+.. .||+..   ..       +.+|.... ......+.+|.++|..+...   -+..+++.....+ ....++
T Consensus         3 ~~~~~gG~~n~vy~~~---~~-------~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~   71 (235)
T cd05155           3 EPVDSGGTDNATFRLG---DD-------MSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS   71 (235)
T ss_pred             eeccCCCcccceEEcC---Cc-------eEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence            456766665 588751   21       44554432 22345788999999888532   3444444333211 124588


Q ss_pred             EEecCCCCCH
Q 021173          256 IYERLFHGSL  265 (316)
Q Consensus       256 V~Ey~~~GsL  265 (316)
                      +|++++|.++
T Consensus        72 l~~~i~G~~l   81 (235)
T cd05155          72 VYRWLEGETA   81 (235)
T ss_pred             EEEeecCCCC
Confidence            9999998665

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.54  E-value=0.16  Score=44.91  Aligned_cols=70  Identities=17%  Similarity=0.165  Sum_probs=41.5

Q ss_pred             eeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhh-HhHHHHHHHHHhCCCCCc-ceeeeEEEcCCCCeEEEEEecC
Q 021173          183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNL-CKLLGFHARDGSDQRMLIYERL  260 (316)
Q Consensus       183 IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~~~lV~Ey~  260 (316)
                      +..|-.+.+|+....+..       +.+|......... -...+|..+++.+....+ .++++++.      -++||||+
T Consensus         4 ~~~G~tn~~y~~~~~~~~-------~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~------~~~v~e~i   70 (256)
T TIGR02721         4 LSGGLTNRSWRIEHPGIS-------FVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE------HWLLVEWL   70 (256)
T ss_pred             CCCcCcCCeEEEEeCCcc-------EEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC------CEEEEEec
Confidence            455777889988743322       5555543222211 235789999998864333 34444321      26899999


Q ss_pred             CCCCH
Q 021173          261 FHGSL  265 (316)
Q Consensus       261 ~~GsL  265 (316)
                      +|..+
T Consensus        71 ~G~~~   75 (256)
T TIGR02721        71 EGEVI   75 (256)
T ss_pred             cCccc
Confidence            98654

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=94.32  E-value=0.004  Score=61.24  Aligned_cols=112  Identities=10%  Similarity=-0.039  Sum_probs=71.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC-cceeeeEEEcCCCCeEEEEEec
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-LCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      +-.++|+++++|+.+...+..      ...+.+...    ....-++++|.+++||| .+..++-+..  .+..++++++
T Consensus       248 h~fvK~altknpKkRptaekl------L~h~fvs~~----l~~rl~~eLLdK~n~P~~~v~~~~d~~~--E~~~~i~~~i  315 (829)
T KOG0576|consen  248 HNFVKGALTKNPKKRPTAEKL------LQHPFVSQT----LSRRLAIELLDKVNNPNPVVRYLEDYDG--EDYLWIPMRI  315 (829)
T ss_pred             HHHHHHHhcCCCccCCChhhh------eeceeeccc----hhhHHHHHHHHHccCCCCcccccccCCc--ccccchhhhh
Confidence            446789999999988766553      224443322    34556889999999999 4444444333  3788999999


Q ss_pred             CCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 021173          260 LFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY  309 (316)
Q Consensus       260 ~~~G-sL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrD  309 (316)
                      +.+| +-...+...  ...+..-+...+.+.-+++|+|||+.   .-+|||
T Consensus       316 ~s~~rs~~~~~~~s--e~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d  361 (829)
T KOG0576|consen  316 CSTGRSSALEMTVS--EIALEQYQFAYPLRKETRPLAELHSS---YKVHRD  361 (829)
T ss_pred             hcCCccccccCChh--hHhhhhhhhhhhhhhhcccccccccc---cccCcc
Confidence            9887 222111111  11233344455677788999999984   248897

>PRK05231 homoserine kinase; Provisional

Probab=94.23  E-value=0.7  Score=42.20  Aligned_cols=91  Identities=12%  Similarity=0.002  Sum_probs=48.1

Q ss_pred             cCHHHHHHHhCCCCC-----cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC--CC
Q 021173          165 FPLDEVAAACHNFFS-----DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH--PN  237 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~-----~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H--pn  237 (316)
                      .+.+++......|..     .+.|+.|....+|+....++.       +.+|....  ........|+.++..|..  -.
T Consensus         7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~-------~vLK~~~~--~~~~~l~~~~~~l~~L~~~glp   77 (319)
T PRK05231          7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGE-------YVLTLFER--LTAEDLPFFLGLMQHLAARGVP   77 (319)
T ss_pred             CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCc-------EEEEEecc--CChHHhHHHHHHHHHHHHCCCC
Confidence            445555554455543     244666777789988766553       55565541  112333445555555531  12


Q ss_pred             cceeeeE----EEcCCCCeEEEEEecCCCCC
Q 021173          238 LCKLLGF----HARDGSDQRMLIYERLFHGS  264 (316)
Q Consensus       238 Iv~l~g~----~~~~~~~~~~lV~Ey~~~Gs  264 (316)
                      +.+.+..    ......+..++++||++|..
T Consensus        78 vP~~i~~~~G~~~~~~~g~~~~l~~~l~G~~  108 (319)
T PRK05231         78 VPAPVARRDGAALGELAGKPAAIVTFLEGKW  108 (319)
T ss_pred             CCcceeCCCCCEeeeeCCEEEEEEEecCCCC
Confidence            3333321    11111256789999999863

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.02  E-value=0.66  Score=40.21  Aligned_cols=73  Identities=15%  Similarity=0.158  Sum_probs=44.4

Q ss_pred             ceeeecCceEEEEEEECC--CCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC-CcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGD--DASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP-NLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~--~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp-nIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.|..|-...+|+....+  ...      +.+|.........-...+|+.++..+... -..++++.+.    +  .+||
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~------~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~--~~l~   71 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDA------VLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----N--GLIY   71 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCe------EEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----C--cEEE
Confidence            456778888999987664  332      55565443222222335788888888533 3445554332    1  3799


Q ss_pred             ecCCCCCH
Q 021173          258 ERLFHGSL  265 (316)
Q Consensus       258 Ey~~~GsL  265 (316)
                      ||++|.++
T Consensus        72 e~i~G~~l   79 (235)
T cd05157          72 EFIPGRTL   79 (235)
T ss_pred             EeeCCCcC
Confidence            99998665

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=92.67  E-value=1.3  Score=42.09  Aligned_cols=82  Identities=15%  Similarity=0.158  Sum_probs=54.4

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecC-------CC-chhhHhHHHHHHHHHhCC---CCCcceeeeEEEcCC
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-------PS-SQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDG  249 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-------~~-~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~  249 (316)
                      +.||.|.+..||++...++..     .+.||.-.       .. ....+++..|.+.|..+.   -.++.+++.+..   
T Consensus        32 ~elggGn~N~VyrV~~~~g~~-----svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~---  103 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGK-----SVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE---  103 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCe-----EEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC---
Confidence            578999999999999877631     15555432       11 124456788888888863   345677776632   


Q ss_pred             CCeEEEEEecCCCCC-HHHHHhc
Q 021173          250 SDQRMLIYERLFHGS-LDRLIYG  271 (316)
Q Consensus       250 ~~~~~lV~Ey~~~Gs-L~~~L~~  271 (316)
                       +..++||||+++.. +.+.|..
T Consensus       104 -~~~~lVME~L~~~~~lr~~Ll~  125 (401)
T PRK09550        104 -ELAVTVMEDLSDHKILRKGLID  125 (401)
T ss_pred             -CCCEEEEecCCCccHHHHHHhc
Confidence             55789999998754 4444443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=91.72  E-value=0.05  Score=52.27  Aligned_cols=73  Identities=18%  Similarity=0.381  Sum_probs=57.0

Q ss_pred             HHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          170 VAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       170 i~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      +....++|....++|.|+||+|+.+....+..     .++||+|.  .......+.++|+.-+..+.|++++.++..|..
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~-----~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~  118 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADEN-----KYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYE  118 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccch-----hhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceec
Confidence            34556789999999999999999998876553     27888876  233445668889999999999999998766654

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=90.93  E-value=1  Score=42.29  Aligned_cols=127  Identities=13%  Similarity=0.152  Sum_probs=77.0

Q ss_pred             cceeeecCceEEEEEEECCCCc-eeEEEEEeeeecCCC---chh----------------hH-hHHHHHHHHHhCCCCCc
Q 021173          180 DRCISEGLSSVMYRASFGDDAS-TSKKFEATVTRLNPS---SQG----------------VK-EFINDVNTLASLQHPNL  238 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~-~~~~~~vavK~~~~~---~~~----------------~~-~~~~E~~~l~~l~HpnI  238 (316)
                      ..+|..|.=+.||.++..++.. +++.++..|-.++..   -.+                .+ .-..|+.-|.+|+...|
T Consensus       149 nGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGI  228 (520)
T KOG2270|consen  149 NGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGI  228 (520)
T ss_pred             ccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4778889999999999888876 333333333333210   000                11 12457777888765444


Q ss_pred             ceeeeEEEcCCCCeEEEEEecCCCCC-HHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          239 CKLLGFHARDGSDQRMLIYERLFHGS-LDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       239 v~l~g~~~~~~~~~~~lV~Ey~~~Gs-L~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .----+..    ....|||+|+-... -.-.|..    ..++...+..+-.+++.-|.-|...+  +.||-||.-=|++
T Consensus       229 P~PePIlL----k~hVLVM~FlGrdgw~aPkLKd----~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~L  297 (520)
T KOG2270|consen  229 PCPEPILL----KNHVLVMEFLGRDGWAAPKLKD----ASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLL  297 (520)
T ss_pred             CCCCceee----ecceEeeeeccCCCCcCccccc----ccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhhe
Confidence            32222222    34579999995322 1223332    24777777777788888888888764  6999999876663

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=90.93  E-value=3.6  Score=37.36  Aligned_cols=91  Identities=13%  Similarity=0.000  Sum_probs=49.0

Q ss_pred             CHHHHHHHhCCCCC-----cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC--CCc
Q 021173          166 PLDEVAAACHNFFS-----DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH--PNL  238 (316)
Q Consensus       166 ~~~ei~~~t~~f~~-----~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H--pnI  238 (316)
                      +.+++......|..     ...++.|....+|+....++.       +.+|..... ........|++++..|..  -.+
T Consensus         8 ~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~~-------~vLK~~~~~-~~~~~i~~e~~~l~~L~~~g~pv   79 (307)
T TIGR00938         8 SDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVGR-------YILTLYEKR-VKAEELPFFLALTTHLAARGLPV   79 (307)
T ss_pred             CHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCCc-------EEEEEecCC-CCHHHHHHHHHHHHHHHHCCCCC
Confidence            33445444444433     345667767889988755443       445554321 112345566777777742  224


Q ss_pred             ceeeeEEE----cCCCCeEEEEEecCCCCC
Q 021173          239 CKLLGFHA----RDGSDQRMLIYERLFHGS  264 (316)
Q Consensus       239 v~l~g~~~----~~~~~~~~lV~Ey~~~Gs  264 (316)
                      .+++....    ....+..+++|||++|..
T Consensus        80 p~~i~t~~g~~~~~~~g~~~~l~e~i~G~~  109 (307)
T TIGR00938        80 PKPVKSRDGRQLSTLAGKPACLVEFLQGLS  109 (307)
T ss_pred             CccccCCCCCeehhcCCeEEEEEEeCCCCC
Confidence            44443211    111256789999998854

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PLN02756 S-methyl-5-thioribose kinase

Probab=89.89  E-value=3.3  Score=39.51  Aligned_cols=99  Identities=8%  Similarity=-0.041  Sum_probs=58.2

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecC-----CCc---hhhHhHHHHHHHHHhCC---CCCcceeeeEEEcC
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-----PSS---QGVKEFINDVNTLASLQ---HPNLCKLLGFHARD  248 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-----~~~---~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~  248 (316)
                      .+.||.|....||+....++ .      +.||.-.     ...   ....+-..|...|..+.   -.++.+++.++.  
T Consensus        37 ~~eiggGn~N~VyrV~~~~~-s------vVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--  107 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSSSG-S------FVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--  107 (418)
T ss_pred             EEEcCCCceeeEEEEEcCCc-c------EEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--
Confidence            36789999999999887543 2      4444433     111   13344445666666653   357888888876  


Q ss_pred             CCCeEEEEEecCCC--CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 021173          249 GSDQRMLIYERLFH--GSLDRLIYGRSDGPPIDWNTRVKIALCAAQG  293 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~--GsL~~~L~~~~~~~~l~~~~~~~ia~qia~g  293 (316)
                        +..+|+|||+++  ..|.+.|-...    .....+..+...++..
T Consensus       108 --d~~vlvME~L~~~~~ilr~~Ll~G~----~~p~~a~~ig~~la~t  148 (418)
T PLN02756        108 --TMALIGMRYLEPPHIILRKGLIAGI----EYPLLAEHMSDYMAKT  148 (418)
T ss_pred             --CCCEEEEeecCCcceehhhhhccCC----CCHHHHHHHHHHHHHH
Confidence              446789999977  34555554322    2233444444444444

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=87.56  E-value=3.6  Score=37.34  Aligned_cols=94  Identities=26%  Similarity=0.224  Sum_probs=53.9

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC---CCCcceeeeEEEcCCCCeEE
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ...+.|+.|....+|+.. .+++.      +-+|...  ......|..|.+-|+.|.   --.+.+.+++....  +.-+
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~------~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~--~~~f   88 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGS------YFVKVNS--ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYD--DDAF   88 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-E------EEEEEEE--GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-S--SCCE
T ss_pred             eeeEecCCCChhheEEEE-CCCcc------EEEEecC--hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeec--CCce
Confidence            334678889999999887 33332      5555543  344566889999888884   34567788877664  5569


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      |||||++.+..      .    .-       -...+.++|+-||.
T Consensus        89 Llle~l~~~~~------~----~~-------~~~~lg~~LA~LH~  116 (288)
T PF03881_consen   89 LLLEFLEMGSP------S----PP-------DWEELGRQLAALHQ  116 (288)
T ss_dssp             EEEE------------------CC-------HHHHHHHHHHHHHH
T ss_pred             EEEEeecCCCC------C----ch-------hHHHHHHHHHHHhh
Confidence            99999976511      0    11       12456777888998

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=86.34  E-value=4.5  Score=36.28  Aligned_cols=77  Identities=14%  Similarity=0.076  Sum_probs=46.6

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC--CcceeeeEE----EcCCCCeE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP--NLCKLLGFH----ARDGSDQR  253 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp--nIv~l~g~~----~~~~~~~~  253 (316)
                      .+.|..|....+|+....++.       +.+|....  ........|+.++..+.+.  .+.+++...    .....+..
T Consensus        19 i~~i~~G~~n~~y~v~~~~~~-------~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~   89 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSGR-------YVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP   89 (296)
T ss_pred             eecccCccccceEEEEeCCCc-------EEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence            356677777889988765543       55665543  2334566788888887533  344444321    00112556


Q ss_pred             EEEEecCCCCCH
Q 021173          254 MLIYERLFHGSL  265 (316)
Q Consensus       254 ~lV~Ey~~~GsL  265 (316)
                      ++||+|++|..+
T Consensus        90 ~~l~~~i~G~~~  101 (296)
T cd05153          90 AALVEFLAGEHL  101 (296)
T ss_pred             EEEEEeCCCCCC
Confidence            899999998664

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=85.30  E-value=3.1  Score=37.56  Aligned_cols=97  Identities=23%  Similarity=0.233  Sum_probs=55.3

Q ss_pred             ceeeecCceEEEEEEECCC------CceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCc-ceeeeEEEcCCCCeE
Q 021173          181 RCISEGLSSVMYRASFGDD------ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL-CKLLGFHARDGSDQR  253 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~~  253 (316)
                      +.|..|-...+|+....++      +.     .+.+|.............+|..++..+....+ .++++++..      
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~-----~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~------   72 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPR-----KVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN------   72 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCC-----eEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC------
Confidence            3455666678998876542      11     15555544333333456788888888853333 345555431      


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      .+|+||++|..+.......           ..++.++++.|..||+
T Consensus        73 ~~v~e~i~G~~l~~~~~~~-----------~~~~~~ia~~L~~lH~  107 (302)
T cd05156          73 GRIEEFIPSRTLTTEELRD-----------PDISAEIARRMAKLHS  107 (302)
T ss_pred             CchhheeCCCcCCHhHcCC-----------cHHHHHHHHHHHHhhC
Confidence            3589999987664321110           1245566777777776

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=83.79  E-value=1.1  Score=34.92  Aligned_cols=44  Identities=16%  Similarity=0.173  Sum_probs=31.6

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHh
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS  232 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~  232 (316)
                      +-||.|+.|.||+|++.++..      |+||.....  -.+.+...+.+|..
T Consensus        17 ~PlasASiaQVh~a~l~~g~~------VaVKV~rP~--i~~~i~~Dl~~l~~   60 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEE------VAVKVQRPG--IEEQIEADLRILRR   60 (119)
T ss_pred             chhhheehhhheeeeecccch------hhhhhcchH--HHHHHHHHHHHHHH
Confidence            689999999999999988664      888877632  22345555555554

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=82.92  E-value=30  Score=31.06  Aligned_cols=64  Identities=11%  Similarity=0.152  Sum_probs=36.2

Q ss_pred             EEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC--CcceeeeE-----EEcCCCCeEEEEEecCCC
Q 021173          190 VMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP--NLCKLLGF-----HARDGSDQRMLIYERLFH  262 (316)
Q Consensus       190 ~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp--nIv~l~g~-----~~~~~~~~~~lV~Ey~~~  262 (316)
                      .||+....++.       +.+|+....   ...+..|+.++..|...  .+..++..     +... .+..++|+||++|
T Consensus        11 ~v~~v~t~~g~-------~~LK~~~~~---~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~-~~~~~~l~~~i~G   79 (313)
T TIGR02906        11 NVYKVETDSGN-------KCLKKINYP---PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKY-NGDLYVLTEWIEG   79 (313)
T ss_pred             cEEEEEeCCCC-------eEEEEcCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEE-CCEEEEEehhccC
Confidence            48887755443       667766422   23345566666666322  34444422     1111 3568999999998


Q ss_pred             CC
Q 021173          263 GS  264 (316)
Q Consensus       263 Gs  264 (316)
                      ..
T Consensus        80 ~~   81 (313)
T TIGR02906        80 RE   81 (313)
T ss_pred             cC
Confidence            54

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK12396 5-methylribose kinase; Reviewed

Probab=82.28  E-value=3.8  Score=38.91  Aligned_cols=81  Identities=16%  Similarity=0.137  Sum_probs=50.9

Q ss_pred             ceeeecCceEEEEEEECC-CCceeEEEEEeeeecC-------CCchhhHhHHHHHHHHHhCC--CC-CcceeeeEEEcCC
Q 021173          181 RCISEGLSSVMYRASFGD-DASTSKKFEATVTRLN-------PSSQGVKEFINDVNTLASLQ--HP-NLCKLLGFHARDG  249 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~-------~~~~~~~~~~~E~~~l~~l~--Hp-nIv~l~g~~~~~~  249 (316)
                      +.||-|....||++.+.. ++.      +.||.-.       ...-..++...|.++|+.+.  -| .+.++|.|-    
T Consensus        35 ~eigdGnlN~VfrV~~~~~~~s------vIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~D----  104 (409)
T PRK12396         35 KEIGDGNLNYVFRVWDEQKNIS------VIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLFD----  104 (409)
T ss_pred             eEcCCCceEEEEEEeeCCCCce------EEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEEC----
Confidence            578999999999999853 322      4444322       11334566677888888764  34 455565432    


Q ss_pred             CCeEEEEEecCCC-CCHHHHHhc
Q 021173          250 SDQRMLIYERLFH-GSLDRLIYG  271 (316)
Q Consensus       250 ~~~~~lV~Ey~~~-GsL~~~L~~  271 (316)
                      .+...+|||+++. ..|.+.|..
T Consensus       105 ~e~~~~vMEdL~~~~ilR~~Li~  127 (409)
T PRK12396        105 SVMNCCVMEDLSDHTILRTALIN  127 (409)
T ss_pred             cHHhhHHHHhCcccHHHHHHHHc
Confidence            2667899999964 345555554

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=81.94  E-value=7.6  Score=36.44  Aligned_cols=81  Identities=11%  Similarity=0.133  Sum_probs=49.1

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecC--------CCchhhHhHHHHHHHHHhCC--CC-CcceeeeEEEcCCC
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLN--------PSSQGVKEFINDVNTLASLQ--HP-NLCKLLGFHARDGS  250 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--------~~~~~~~~~~~E~~~l~~l~--Hp-nIv~l~g~~~~~~~  250 (316)
                      .||.|....||++...+++.     .+.||.-.        ...-...+...|.+.|....  -| .+.++|.|-    .
T Consensus         2 EigdGnlN~VfrV~~~~g~~-----svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D----~   72 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDR-----AAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFD----T   72 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCe-----eEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEc----c
Confidence            57999999999999865421     14444332        11233455567788887764  34 345555432    2


Q ss_pred             CeEEEEEecCCCC-CHHHHHhc
Q 021173          251 DQRMLIYERLFHG-SLDRLIYG  271 (316)
Q Consensus       251 ~~~~lV~Ey~~~G-sL~~~L~~  271 (316)
                      +...+|||++... .|.+.|..
T Consensus        73 e~~~~vMEdL~~~~ilR~~Li~   94 (370)
T TIGR01767        73 EMAVTVMEDLSHHKIARKGLIE   94 (370)
T ss_pred             ccceehHhhCccchHHHHHHHc
Confidence            5667999999653 45555544

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=81.19  E-value=2.4  Score=45.21  Aligned_cols=77  Identities=17%  Similarity=0.149  Sum_probs=59.7

Q ss_pred             HhHHHHHHHHHhCCCCCcceeeeEEEcCC-CC-eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 021173          221 KEFINDVNTLASLQHPNLCKLLGFHARDG-SD-QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH  298 (316)
Q Consensus       221 ~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~-~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH  298 (316)
                      .....|...+.++.|.|++.+++|-...- .+ ...+..|+|..-++...+....   .++..+.+.+..++..||.|+|
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---~i~~~~~r~~~~~~~~GL~~~h  303 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---SIPLETLRILHQKLLEGLAYLH  303 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---ccCHHHHHHHHHHHhhhHHHHH
Confidence            34556778888999999999998877631 12 1223447888888988888754   5888899999999999999999


Q ss_pred             hc
Q 021173          299 EE  300 (316)
Q Consensus       299 ~~  300 (316)
                      +.
T Consensus       304 ~~  305 (1351)
T KOG1035|consen  304 SL  305 (1351)
T ss_pred             Hh
Confidence            85

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=81.15  E-value=11  Score=34.83  Aligned_cols=44  Identities=9%  Similarity=0.092  Sum_probs=28.6

Q ss_pred             hHhHHHHHHHHHhCCC--CCcceeeeEEEcCCCCeEEEEEecCCCC
Q 021173          220 VKEFINDVNTLASLQH--PNLCKLLGFHARDGSDQRMLIYERLFHG  263 (316)
Q Consensus       220 ~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~~~~~~~lV~Ey~~~G  263 (316)
                      .....+|..+++.+.-  .-+...+++|.++.-+..|.||+|++|.
T Consensus        65 ~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe  110 (321)
T COG3173          65 AHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGE  110 (321)
T ss_pred             hhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecce
Confidence            3445677777777753  2234456777664224679999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	316
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-11
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-11
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-11
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-10
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-10
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-10
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		9e-09
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-08
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		1e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-04

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
           N F +R IS       EG   V+Y+    +     KK  A V   + +++ +K+ F  ++
Sbjct: 25  NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 81
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
             +A  QH NL +LLGF + DG D   L+Y  + +GSL DRL     DG PP+ W+ R K
Sbjct: 82  KVMAKCQHENLVELLGF-SSDGDD-LCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 137
Query: 286 IALCAAQGLTFLHE 299
           IA  AA G+ FLHE
Sbjct: 138 IAQGAANGINFLHE 151

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
           N F +R IS       EG   V+Y+    +     KK  A V   + +++ +K+ F  ++
Sbjct: 25  NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 81
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
             +A  QH NL +LLGF + DG D   L+Y  + +GSL DRL     DG PP+ W+ R K
Sbjct: 82  KVMAKCQHENLVELLGF-SSDGDD-LCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 137
Query: 286 IALCAAQGLTFLHE 299
           IA  AA G+ FLHE
Sbjct: 138 IAQGAANGINFLHE 151

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
           N F +R IS       EG   V+Y+    +     KK  A V   + +++ +K+ F  ++
Sbjct: 19  NNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 75
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
             +A  QH NL +LLGF + DG D   L+Y  + +GSL DRL     DG PP+ W+ R K
Sbjct: 76  KVMAKCQHENLVELLGF-SSDGDD-LCLVYVYMPNGSLLDRL--SCLDGTPPLSWHMRCK 131
Query: 286 IALCAAQGLTFLHE 299
           IA  AA G+ FLHE
Sbjct: 132 IAQGAANGINFLHE 145

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN 225
           PL ++  A +NF     I  G+   +Y+    D A  + K      R   SSQG++EF  
Sbjct: 30  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFET 84
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTR 283
           ++ TL+  +HP+L  L+GF   D  ++ +LIY+ + +G+L R +YG SD P   + W  R
Sbjct: 85  EIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQR 141
Query: 284 VKIALCAAQGLTFLH 298
           ++I + AA+GL +LH
Sbjct: 142 LEICIGAARGLHYLH 156

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN 225
           PL ++  A +NF     I  G+   +Y+    D A  + K      R   SSQG++EF  
Sbjct: 30  PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFET 84
Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP--PIDWNTR 283
           ++ TL+  +HP+L  L+GF   D  ++ +LIY+ + +G+L R +YG SD P   + W  R
Sbjct: 85  EIETLSFCRHPHLVSLIGFC--DERNEMILIYKYMENGNLKRHLYG-SDLPTMSMSWEQR 141
Query: 284 VKIALCAAQGLTFLH 298
           ++I + AA+GL +LH
Sbjct: 142 LEICIGAARGLHYLH 156

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 17/134 (12%)
Query: 176 NFFSDRCIS-------EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDV 227
           N F +R IS       EG   V+Y+    +     KK  A V   + +++ +K+ F  ++
Sbjct: 16  NNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMV---DITTEELKQQFDQEI 72
Query: 228 NTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSL-DRLIYGRSDG-PPIDWNTRVK 285
              A  QH NL +LLGF + DG D   L+Y    +GSL DRL     DG PP+ W+ R K
Sbjct: 73  KVXAKCQHENLVELLGF-SSDGDD-LCLVYVYXPNGSLLDRL--SCLDGTPPLSWHXRCK 128
Query: 286 IALCAAQGLTFLHE 299
           IA  AA G+ FLHE
Sbjct: 129 IAQGAANGINFLHE 142

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGV 220
           + F L E+  A  NF +   +  G    +Y+    D    +      V RL    +  G 
Sbjct: 18  KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVA------VKRLKEERTQGGE 71
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-PPID 279
            +F  +V  ++   H NL +L GF       +R+L+Y  + +GS+   +  R +  PP+D
Sbjct: 72  LQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 280 WNTRVKIALCAAQGLTFLHE 299
           W  R +IAL +A+GL +LH+
Sbjct: 130 WPKRQRIALGSARGLAYLHD 149

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--GV 220
           + F L E+  A  NF +   +  G    +Y+    D    +      V RL       G 
Sbjct: 26  KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVA------VKRLKEERXQGGE 79
Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-PPID 279
            +F  +V  ++   H NL +L GF       +R+L+Y  + +GS+   +  R +  PP+D
Sbjct: 80  LQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 280 WNTRVKIALCAAQGLTFLHE 299
           W  R +IAL +A+GL +LH+
Sbjct: 138 WPKRQRIALGSARGLAYLHD 157

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 183 ISEGLSSVMYRASF-GDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241
           I  G    ++RA + G D +     E         ++ V EF+ +V  +  L+HPN+   
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           +G  A        ++ E L  GSL RL++       +D   R+ +A   A+G+ +LH   
Sbjct: 100 MG--AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 302 P 302
           P
Sbjct: 158 P 158

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 183 ISEGLSSVMYRASF-GDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKL 241
           I  G    ++RA + G D +     E         ++ V EF+ +V  +  L+HPN+   
Sbjct: 45  IGAGSFGTVHRAEWHGSDVAVKILMEQDF-----HAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           +G  A        ++ E L  GSL RL++       +D   R+ +A   A+G+ +LH   
Sbjct: 100 MG--AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 302 P 302
           P
Sbjct: 158 P 158

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	316
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-33
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-33
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-30
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-19
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-14
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	4e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-11
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-11
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	9e-11
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-10
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-10
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-08
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	7e-08
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-07
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-07
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	7e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	9e-06
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-05
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	6e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-05
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	8e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	9e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-04
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-04
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	6e-04
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-04

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  124 bits (314), Expect = 1e-33
 Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 25/161 (15%)

Query: 159 TGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFG-------DDASTSKKFEATVT 211
                +F   E+    +NF  D        + M    FG       ++          V 
Sbjct: 9   DTRFHSFSFYELKNVTNNF--DERPISVGGNKMGEGGFGVVYKGYVNNT------TVAVK 60

Query: 212 RLNP-----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLD 266
           +L       + +  ++F  ++  +A  QH NL +LLGF +    D   L+Y  + +GSL 
Sbjct: 61  KLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG--DDLCLVYVYMPNGSLL 118

Query: 267 RLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIF 307
             +      PP+ W+ R KIA  AA G+ FLHE      I 
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIH 156

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  123 bits (310), Expect = 5e-33
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 14/167 (8%)

Query: 136 SFKSGTASGPLFASGPLPLPPTGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRAS 195
            +   T S     S    +P          PL ++  A +NF     I  G+   +Y+  
Sbjct: 4   KYSKATNSINDALSSSYLVPFES----YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGV 59

Query: 196 FGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM 254
             D A      +  + R  P S QG++EF  ++ TL+  +HP+L  L+GF      ++ +
Sbjct: 60  LRDGA------KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER--NEMI 111

Query: 255 LIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEE 300
           LIY+ + +G+L R +YG       + W  R++I + AA+GL +LH  
Sbjct: 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR 158

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  116 bits (293), Expect = 2e-30
 Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 11/151 (7%)

Query: 153 PLPPTGTGTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTR 212
             P    G L+ F L E+  A  NF +   +  G    +Y+    D           V R
Sbjct: 8   EDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGT------LVAVKR 61

Query: 213 LNP-SSQGVK-EFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIY 270
           L    +QG + +F  +V  ++   H NL +L GF       +R+L+Y  + +GS+   + 
Sbjct: 62  LKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLVYPYMANGSVASCLR 119

Query: 271 GRSDG-PPIDWNTRVKIALCAAQGLTFLHEE 300
            R +  PP+DW  R +IAL +A+GL +LH+ 
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDH 150

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 85.9 bits (213), Expect = 2e-19
 Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 13/142 (9%)

Query: 163 RNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE 222
            +   + +             + G    +++A   ++          V       +   +
Sbjct: 12  VDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLLNE-------YVAVKIFPIQDKQSWQ 64

Query: 223 FINDVNTLASLQHPNLCKLLGF--HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDW 280
              +V +L  ++H N+ + +G             LI      GSL   +        + W
Sbjct: 65  NEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN----VVSW 120

Query: 281 NTRVKIALCAAQGLTFLHEEGP 302
           N    IA   A+GL +LHE+ P
Sbjct: 121 NELCHIAETMARGLAYLHEDIP 142

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 74.7 bits (184), Expect = 1e-15
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLL 242
           +  G   V+ +A +       K+ E        S    K FI ++  L+ + HPN+ KL 
Sbjct: 16  VGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKAFIVELRQLSRVNHPNIVKLY 67

Query: 243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP 302
           G       +   L+ E    GSL  +++G    P       +   L  +QG+ +LH   P
Sbjct: 68  GA----CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123

Query: 303 FQVI 306
             +I
Sbjct: 124 KALI 127

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 73.0 bits (179), Expect = 8e-15
 Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 18/144 (12%)

Query: 165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFI 224
               E +    N      I  G    +Y+ S  +     K F         S    + FI
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVF---------SFANRQNFI 53

Query: 225 N--DVNTLASLQHPNLCKLLGFHAR---DGSDQRMLIYERLFHGSLDRLIYGRSDGPPID 279
           N  ++  +  ++H N+ + +    R   DG  + +L+ E   +GSL + +   +     D
Sbjct: 54  NEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT----SD 109

Query: 280 WNTRVKIALCAAQGLTFLHEEGPF 303
           W +  ++A    +GL +LH E P 
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPR 133

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
           +  ++ V EF+ +V  +  L+HPN+   +G  A        ++ E L  GSL RL++   
Sbjct: 72  DFHAERVNEFLREVAIMKRLRHPNIVLFMG--AVTQPPNLSIVTEYLSRGSLYRLLHKSG 129

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEGP 302
               +D   R+ +A   A+G+ +LH   P
Sbjct: 130 AREQLDERRRLSMAYDVAKGMNYLHNRNP 158

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 70.3 bits (173), Expect = 4e-14
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLL 242
           ++E  S  +++  +  +    K  +      + S++  ++F  +   L    HPN+  +L
Sbjct: 18  LNENHSGELWKGRWQGNDIVVKVLKVR----DWSTRKSRDFNEECPRLRIFSHPNVLPVL 73

Query: 243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGP 302
           G      +    LI   + +GSL  +++       +D +  VK AL  A+G+ FLH   P
Sbjct: 74  GACQSPPAPHPTLITHWMPYGSLYNVLH-EGTNFVVDQSQAVKFALDMARGMAFLHTLEP 132

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 69.3 bits (170), Expect = 9e-14
 Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 9/123 (7%)

Query: 183 ISEGLSSVMYRASFGDDAST--SKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLC 239
           I +G   ++++     D S    K      +          +EF  +V  +++L HPN+ 
Sbjct: 27  IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           KL G       +   ++ E +  G L   +  ++   PI W+ ++++ L  A G+ ++  
Sbjct: 87  KLYGL----MHNPPRMVMEFVPCGDLYHRLLDKAH--PIKWSVKLRLMLDIALGIEYMQN 140

Query: 300 EGP 302
           + P
Sbjct: 141 QNP 143

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             I  G    +YRA +  D    K            SQ ++    +    A L+HPN+  
Sbjct: 13  EIIGIGGFGKVYRAFWIGDEVAVKAARHD--PDEDISQTIENVRQEAKLFAMLKHPNIIA 70

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L G           L+ E    G L+R++ G+     I  +  V  A+  A+G+ +LH+E
Sbjct: 71  LRG--VCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDE 124

Query: 301 GPFQVI 306
               +I
Sbjct: 125 AIVPII 130

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 64.7 bits (158), Expect = 4e-12
 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           +    +  + F+ +V  +  L+HPN+ K +G   +D   +   I E +  G+L  +I  +
Sbjct: 44  IRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--RLNFITEYIKGGTLRGII--K 99

Query: 273 SDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           S      W+ RV  A   A G+ +LH   
Sbjct: 100 SMDSQYPWSQRVSFAKDIASGMAYLHSMN 128

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 17/126 (13%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN--DVNTLASLQHPNL 238
            C+ +G    ++R S+  +    K F         SS+  K +    ++     L+H N+
Sbjct: 14  ECVGKGRYGEVWRGSWQGENVAVKIF---------SSRDEKSWFRETELYNTVMLRHENI 64

Query: 239 CKLLG--FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
              +     +R  S Q  LI      GSL   +        +D  + ++I L  A GL  
Sbjct: 65  LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAH 120

Query: 297 LHEEGP 302
           LH E  
Sbjct: 121 LHIEIF 126

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 17/128 (13%)

Query: 182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN--DVNTLASLQHPNLC 239
            I +G    ++R  +  +    K F         SS+  + +    ++     L+H N+ 
Sbjct: 49  SIGKGRFGEVWRGKWRGEEVAVKIF---------SSREERSWFREAEIYQTVMLRHENIL 99

Query: 240 KLLG--FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
             +           Q  L+ +   HGSL   +        +     +K+AL  A GL  L
Sbjct: 100 GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHL 155

Query: 298 HEEGPFQV 305
           H E     
Sbjct: 156 HMEIVGTQ 163

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 17/129 (13%)

Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFIN--DVNTLASLQHPN 237
            + I +G    ++   +  +    K F          +     +    ++     ++H N
Sbjct: 42  VKQIGKGRYGEVWMGKWRGEKVAVKVF---------FTTEEASWFRETEIYQTVLMRHEN 92

Query: 238 LCKLLG--FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295
           +   +           Q  LI +   +GSL   +        +D  + +K+A  +  GL 
Sbjct: 93  ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLC 148

Query: 296 FLHEEGPFQ 304
            LH E    
Sbjct: 149 HLHTEIFST 157

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 60.8 bits (148), Expect = 9e-11
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
             +   +K F  +V      +H N+   +G  A        +I       +L  ++  R 
Sbjct: 67  RDNEDQLKAFKREVMAYRQTRHENVVLFMG--ACMSPPHLAIITSLCKGRTLYSVV--RD 122

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEG 301
               +D N   +IA    +G+ +LH +G
Sbjct: 123 AKIVLDVNKTRQIAQEIVKGMGYLHAKG 150

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
            P+ Q ++ F N+V  L   +H N+   +G+       Q  ++ +     SL   +   +
Sbjct: 58  APTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---PQLAIVTQWCEGSSLYHHL--HA 112

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEG 301
                +    + IA   A+G+ +LH + 
Sbjct: 113 SETKFEMKKLIDIARQTARGMDYLHAKS 140

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.0 bits (128), Expect = 4e-08
 Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
                 +F+ +   L    HPN+ +L+G   +       ++ E +  G      + R++G
Sbjct: 152 PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPIYIVMELVQGGDFLT--FLRTEG 207

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             +   T +++   AA G+ +L  
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLES 231

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
                 + +   ++  L +L H N+ K  G    DG +   LI E L  GSL    Y   
Sbjct: 61  ESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE--YLPK 118

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHE 299
           +   I+   ++K A+   +G+ +L  
Sbjct: 119 NKNKINLKQQLKYAVQICKGMDYLGS 144

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           + + +++F  ++  L SLQH N+ K  G     G     LI E L +GSL    Y +   
Sbjct: 51  TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHK 108

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             ID    ++      +G+ +L  
Sbjct: 109 ERIDHIKLLQYTSQICKGMEYLGT 132

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
                ++F  ++  L +L    + K  G     G     L+ E L  G L    + +   
Sbjct: 64  GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHR 121

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             +D +  +  +    +G+ +L  
Sbjct: 122 ARLDASRLLLYSSQICKGMEYLGS 145

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 2/84 (2%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           + + +++F  ++  L SLQH N+ K  G     G     LI E L +GSL    Y +   
Sbjct: 82  TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD--YLQKHK 139

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             ID    ++      +G+ +L  
Sbjct: 140 ERIDHIKLLQYTSQICKGMEYLGT 163

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 45.7 bits (109), Expect = 7e-06
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
                + F    + ++ L H +L    G       D+ +L+ E +  GSLD   Y + + 
Sbjct: 52  HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC--GDENILVQEFVKFGSLDT--YLKKNK 107

Query: 276 PPIDWNTRVKIALCAAQGLTFL 297
             I+   ++++A   A  + FL
Sbjct: 108 NCINILWKLEVAKQLAAAMHFL 129

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
                 V +F+ +   +    HPN+  LLG          +++   + HG L    + R+
Sbjct: 64  ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-CLRSEGSPLVVLPYMKHGDLRN--FIRN 120

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHE 299
           +         +   L  A+G+ +L  
Sbjct: 121 ETHNPTVKDLIGFGLQVAKGMKYLAS 146

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 45.7 bits (109), Expect = 9e-06
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           S +  KE +++   +AS+ +P++C+LLG           LI + +  G L    Y R   
Sbjct: 57  SPKANKEILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLD--YVREHK 111

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             I     +   +  A+G+ +L +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLED 135

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 212 RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG 271
                 Q  +   + +  + SL H ++ +LLG           L+ + L  GSL    + 
Sbjct: 51  EDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP---GSSLQLVTQYLPLGSLLD--HV 105

Query: 272 RSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           R     +     +   +  A+G+ +L E
Sbjct: 106 RQHRGALGPQLLLNWGVQIAKGMYYLEE 133

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           +   S    EF  +  T+  L HP L K  G  +++      ++ E + +G L    Y R
Sbjct: 40  IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE--YPIYIVTEYISNGCLLN--YLR 95

Query: 273 SDGPPIDWNTRVKIALCAAQGLTFL 297
           S G  ++ +  +++     +G+ FL
Sbjct: 96  SHGKGLEPSQLLEMCYDVCEGMAFL 120

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
                 V +F+ +   +    HPN+  LLG          +++   + HG L    + R+
Sbjct: 128 ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI-CLRSEGSPLVVLPYMKHGDLRN--FIRN 184

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHE 299
           +         +   L  A+G+ FL  
Sbjct: 185 ETHNPTVKDLIGFGLQVAKGMKFLAS 210

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 5/84 (5%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           S    ++F+ +  T+    HP++ KL+G       +   +I E    G L    + +   
Sbjct: 56  SDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRS--FLQVRK 110

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             +D  + +  A   +  L +L  
Sbjct: 111 YSLDLASLILYAYQLSTALAYLES 134

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
           +   Q    +  +++ L +L H ++ K  G     G+    L+ E +  GSL   +   S
Sbjct: 71  DAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS 130

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHE 299
               I     +  A    +G+ +LH 
Sbjct: 131 ----IGLAQLLLFAQQICEGMAYLHA 152

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
             + +   +F+ +   +    H N+ +L G  ++      M+I E + +G+LD+  + R 
Sbjct: 84  GYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK--YKPMMIITEYMENGALDK--FLRE 139

Query: 274 DGPPIDWNTRVKIALCAAQGLTFLHEEG 301
                     V +    A G+ +L    
Sbjct: 140 KDGEFSVLQLVGMLRGIAAGMKYLANMN 167

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           +   +   ++FI +   +  L HP L +L G           L+ E + HG L    Y R
Sbjct: 40  IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE--QAPICLVTEFMEHGCLSD--YLR 95

Query: 273 SDGPPIDWNTRVKIALCAAQGLTFL 297
           +        T + + L   +G+ +L
Sbjct: 96  TQRGLFAAETLLGMCLDVCEGMAYL 120

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 43.4 bits (102), Expect = 6e-05
 Identities = 13/82 (15%), Positives = 31/82 (37%), Gaps = 5/82 (6%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
                +E + +   +  L +P + +L+G       +  ML+ E    G L +  +     
Sbjct: 376 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEMAGGGPLHK--FLVGKR 430

Query: 276 PPIDWNTRVKIALCAAQGLTFL 297
             I  +   ++    + G+ +L
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYL 452

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           S +  KE +++   +AS+ +P++C+LLG           LI + +  G L    Y R   
Sbjct: 57  SPKANKEILDEAYVMASVDNPHVCRLLGICLT---STVQLITQLMPFGCLLD--YVREHK 111

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             I     +   +  A+G+ +L +
Sbjct: 112 DNIGSQYLLNWCVQIAKGMNYLED 135

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 13/82 (15%), Positives = 32/82 (39%), Gaps = 5/82 (6%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
                +E + +   +  L +P + +L+G      ++  ML+ E    G L +  +     
Sbjct: 50  EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ---AEALMLVMEMAGGGPLHK--FLVGKR 104

Query: 276 PPIDWNTRVKIALCAAQGLTFL 297
             I  +   ++    + G+ +L
Sbjct: 105 EEIPVSNVAELLHQVSMGMKYL 126

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           +   S    EFI +   + +L H  L +L G   +       +I E + +G L    Y R
Sbjct: 56  IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK--QRPIFIITEYMANGCLLN--YLR 111

Query: 273 SDGPPIDWNTRVKIALCAAQGLTFL 297
                      +++     + + +L
Sbjct: 112 EMRHRFQTQQLLEMCKDVCEAMEYL 136

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           + +  ++F+ + + +    HPN+ +L G   +  S   M++ E + +GSLD   + R   
Sbjct: 86  TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDS--FLRKHD 141

Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEG 301
                   V +    A G+ +L + G
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMG 167

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 42.3 bits (100), Expect = 9e-05
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS 273
               Q V+ F+ +   +  L HPN+  L+G           ++   + HG L +  + RS
Sbjct: 60  ITEMQQVEAFLREGLLMRGLNHPNVLALIGI-MLPPEGLPHVLLPYMCHGDLLQ--FIRS 116

Query: 274 DGPPIDWNTRVKIALCAAQGLTFL 297
                     +   L  A+G+ +L
Sbjct: 117 PQRNPTVKDLISFGLQVARGMEYL 140

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           +    ++F+++   + +L HP++ KL+G       +   +I E   +G L    Y   + 
Sbjct: 53  TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE---EPTWIIMELYPYGELGH--YLERNK 107

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
             +   T V  +L   + + +L  
Sbjct: 108 NSLKVLTLVLYSLQICKAMAYLES 131

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 5/88 (5%)

Query: 212 RLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYG 271
           +   S    ++F+ +  T+    HP++ KL+G       +   +I E    G L    + 
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NPVWIIMELCTLGELRS--FL 481

Query: 272 RSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           +     +D  + +  A   +  L +L  
Sbjct: 482 QVRKFSLDLASLILYAYQLSTALAYLES 509

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           + P S  V+ F+ + N + +LQH  L KL     ++      +I E +  GSL  L + +
Sbjct: 220 MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI---YIITEFMAKGSL--LDFLK 274

Query: 273 S-DGPPIDWNTRVKIALCAAQGLTFLHEEG 301
           S +G        +  +   A+G+ F+ +  
Sbjct: 275 SDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 209 TVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR---MLIYERLFHGSL 265
           T+   N S + ++EF+++   +    HPN+ +LLG      S      M+I   + +G L
Sbjct: 69  TMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDL 128

Query: 266 D---RLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
                     +    I   T +K  +  A G+ +L
Sbjct: 129 HTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYL 163

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           + +  ++F+++ + +    HPN+ +L G   R      M++ E + +GSLD   + R+  
Sbjct: 90  TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--GRLAMIVTEYMENGSLDT--FLRTHD 145

Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEG 301
                   V +      G+ +L + G
Sbjct: 146 GQFTIMQLVGMLRGVGAGMRYLSDLG 171

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
             + + +FI +VN + SL H NL +L G      +    ++ E    GSL  L   R   
Sbjct: 61  QPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---TPPMKMVTELAPLGSL--LDRLRKHQ 115

Query: 276 PPIDWNTRVKIALCAAQGLTFLHE 299
                 T  + A+  A+G+ +L  
Sbjct: 116 GHFLLGTLSRYAVQVAEGMGYLES 139

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           L P +   + F+ +   +  L+H  L +L    +    +   ++ E +  GSL    + +
Sbjct: 216 LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIYIVTEYMSKGSLLD--FLK 270

Query: 273 S-DGPPIDWNTRVKIALCAAQGLTFLHEEG 301
              G  +     V +A   A G+ ++    
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMN 300

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           L   +  V+EF+ +   +  ++HPNL +LLG   R+      +I E + +G+L    Y R
Sbjct: 253 LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--PFYIITEFMTYGNLLD--YLR 308

Query: 273 S-DGPPIDWNTRVKIALCAAQGLTFLHE 299
             +   +     + +A   +  + +L +
Sbjct: 309 ECNRQEVSAVVLLYMATQISSAMEYLEK 336

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR-LIYGR 272
             S Q   +F+ +   ++   H N+ + +G   +     R ++ E +  G L   L   R
Sbjct: 71  VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--RFILMELMAGGDLKSFLRETR 128

Query: 273 ---SDGPPIDWNTRVKIALCAAQGLTFL 297
              S    +     + +A   A G  +L
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYL 156

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 4/78 (5%)

Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPID 279
           + F+ + + +  L+H NL +LLG    +      ++ E +  GSL    Y RS     + 
Sbjct: 59  QAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLYIVTEYMAKGSLVD--YLRSRGRSVLG 115

Query: 280 WNTRVKIALCAAQGLTFL 297
            +  +K +L   + + +L
Sbjct: 116 GDCLLKFSLDVCEAMEYL 133

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 39.9 bits (94), Expect = 5e-04
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 6/86 (6%)

Query: 213 LNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR 272
           L   S     F+ + N +  LQH  L +L     ++      +I E + +GSL    + +
Sbjct: 45  LKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEP---IYIITEYMENGSLVD--FLK 99

Query: 273 S-DGPPIDWNTRVKIALCAAQGLTFL 297
           +  G  +  N  + +A   A+G+ F+
Sbjct: 100 TPSGIKLTINKLLDMAAQIAEGMAFI 125

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 7/96 (7%)

Query: 209 TVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR----MLIYERLFHGS 264
            +     +S  ++EF+ +   +    HP++ KL+G   R  +  R    M+I   + HG 
Sbjct: 58  MLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGD 117

Query: 265 LD---RLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
           L           +   +   T V+  +  A G+ +L
Sbjct: 118 LHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL 153

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 221 KEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS-DGPPID 279
           + F+ + + +  L+H NL +LLG    +      ++ E +  GSL  + Y RS     + 
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEK-GGLYIVTEYMAKGSL--VDYLRSRGRSVLG 287

Query: 280 WNTRVKIALCAAQGLTFLHE 299
            +  +K +L   + + +L  
Sbjct: 288 GDCLLKFSLDVCEAMEYLEG 307

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 39.7 bits (93), Expect = 9e-04
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 6/88 (6%)

Query: 214 NPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDR-LIYGR 272
             S Q   +F+ +   ++   H N+ + +G   +     R ++ E +  G L   L   R
Sbjct: 112 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP--RFILLELMAGGDLKSFLRETR 169

Query: 273 ---SDGPPIDWNTRVKIALCAAQGLTFL 297
              S    +     + +A   A G  +L
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYL 197

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	316
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.97
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.97
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.97
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.96
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.96
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.95
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.94
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.94
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.94
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.92
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.91
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.91
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.91
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.91
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.91
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.91
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.91
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.91
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.91
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.91
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.91
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.91
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.91
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.9
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.9
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.9
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.9
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.9
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.9
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.9
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.9
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.9
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.9
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.9
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.9
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.9
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.9
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.9
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.9
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.9
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.9
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.9
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.9
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.9
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.9
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.9
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.9
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.9
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.9
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.9
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.89
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.89
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.89
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.89
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.89
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.89
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.89
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.89
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.89
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.89
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.89
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.89
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.89
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.89
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.89
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.89
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.89
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.89
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.89
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.89
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.89
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.89
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.89
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.89
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.89
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.89
3niz_A	311	Rhodanese family protein; structural genomics, str	99.89
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.89
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.89
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.89
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.89
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.89
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.89
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.89
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.88
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.88
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.88
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.88
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.88
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.88
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.88
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.88
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.88
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.88
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.88
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.88
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.88
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.88
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.88
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.88
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.88
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.88
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.88
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.88
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.88
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.88
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.88
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.88
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.88
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.88
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.88
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.88
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.88
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.88
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.88
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.88
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.88
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.88
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
3bhy_A	283	Death-associated protein kinase 3; death associate	99.88
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.88
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.88
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.88
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.88
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.88
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.88
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.88
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.88
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.88
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.88
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.88
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.88
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.87
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.87
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.87
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.87
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.87
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.87
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.87
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.87
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.87
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.87
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.87
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.87
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.87
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.87
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.87
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.87
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.87
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.87
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.87
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.87
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.87
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.87
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.87
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.87
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.87
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.87
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.87
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.87
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.87
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.87
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.87
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.87
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.87
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.87
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.87
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.87
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.87
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.86
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.86
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.86
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.86
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.86
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.86
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.86
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.86
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.86
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.86
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.86
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.86
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.86
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.86
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.86
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.86
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.86
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.86
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.86
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.86
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.86
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.86
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.86
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.86
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.85
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.85
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.85
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.85
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.85
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.85
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.85
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.85
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.85
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.85
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.85
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.85
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.85
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.85
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.85
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.85
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.84
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.84
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.84
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.84
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.84
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.84
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.84
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.84
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.84
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.84
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.83
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.83
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.83
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.83
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.83
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.82
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.81
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.8
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.8
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.79
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.77
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.71
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.68
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.53
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.05
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.79
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.77
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.16
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.99
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.89
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	97.66
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.52
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.46
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.04
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.57
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.44
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	95.83
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	95.28
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	94.52
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	88.05
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	86.15
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	85.53
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	83.29
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	82.9
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	82.17
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	81.18
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	80.91
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	80.62

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.97  E-value=3e-31  Score=240.32  Aligned_cols=137  Identities=20%  Similarity=0.344  Sum_probs=112.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+.+.........||||.++. .....++|.+|+.+|++++|||||+++|+|.+.  +.+
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~--~~~   90 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG--DPL   90 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SSE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC--CEE
Confidence            45677799999999999999986532211123489999874 345567899999999999999999999999884  789


Q ss_pred             EEEEecCCCCCHHHHHhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRS----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~----------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||++|+|.++|+...          ....++|..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NIL  160 (299)
T 4asz_A           91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCL  160 (299)
T ss_dssp             EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEE
Confidence            99999999999999997642          134699999999999999999999995   7999999999984

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.97  E-value=7.6e-31  Score=238.15  Aligned_cols=126  Identities=20%  Similarity=0.319  Sum_probs=109.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC---CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN---PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||+||+|++.++        +|||.++   ......+.|.+|+.+|++++|||||+++|+|.+   +
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~~--------vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---~  104 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHGD--------VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---D  104 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSSE--------EEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---S
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCc--------EEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC---C
Confidence            4567779999999999999987653        6777765   344556789999999999999999999999865   6


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||||+||+|.++|+...  ..++|..++.|+.|||.||+|||++   +||||||||+||+
T Consensus       105 ~~~iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NIL  164 (307)
T 3omv_A          105 NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIF  164 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEE
T ss_pred             eEEEEEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEE
Confidence            6899999999999999998653  2599999999999999999999994   7999999999985

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.97  E-value=1e-30  Score=239.88  Aligned_cols=137  Identities=17%  Similarity=0.305  Sum_probs=113.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+.+.........||||.++. .....++|.+|+++|++++|||||+|+|+|.+.  +.+
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~--~~~  118 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG--RPL  118 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SSE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CEE
Confidence            35666789999999999999986422111123489999874 445567899999999999999999999999874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSD------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||++|+|.++|+....            ...++|.+++.|+.|||.||.|||+.   +||||||||+||+
T Consensus       119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NIL  190 (329)
T 4aoj_A          119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCL  190 (329)
T ss_dssp             EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEE
Confidence            999999999999999986431            23599999999999999999999994   7999999999984

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.97  E-value=1.4e-30  Score=240.05  Aligned_cols=131  Identities=15%  Similarity=0.190  Sum_probs=109.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||+||+|++..++.     .||||.+..   .....+.|.+|+.+|++|+|||||++++++.++  +
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~--~   96 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGR-----QYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN--G   96 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCC-----EEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--T
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCC-----EEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC--C
Confidence            678889999999999999999987665     388888863   334567799999999999999999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||+||+|.++|.... +..+++..++.|+.||+.||+|||++   +||||||||+||+
T Consensus        97 ~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NIL  157 (350)
T 4b9d_A           97 SLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIF  157 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEE
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEE
Confidence            8999999999999999998654 34589999999999999999999995   6999999999984

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.97  E-value=2.1e-30  Score=235.69  Aligned_cols=135  Identities=20%  Similarity=0.250  Sum_probs=109.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      +...+.||+|+||.||+|.+.+.........||||.++.  .....++|.+|+.+|++++|||||+|+|+|.++  +.++
T Consensus        28 ~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~--~~~~  105 (308)
T 4gt4_A           28 VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD--QPLS  105 (308)
T ss_dssp             EEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSCE
T ss_pred             CeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC--CEEE
Confidence            445588999999999999985422111113489999874  334457899999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||||++|+|.++|..+..             ...++|..++.|+.|||.||.|||++   +||||||||+||+
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL  177 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL  177 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence            99999999999999975421             13589999999999999999999995   6999999999984

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=4.9e-30  Score=241.73  Aligned_cols=128  Identities=18%  Similarity=0.203  Sum_probs=114.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +.|...+.||+|+||.||+|.+..++.     .||||.+.. .....+.+.+|+.+|+.++|||||+++++|.++  +.+
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~-----~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~  223 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DEL  223 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET--TEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCC-----EEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC--CEE
Confidence            458888999999999999999987765     388888863 334456799999999999999999999999985  899


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||+||+|.+++...    .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus       224 ~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NIL  279 (423)
T 4fie_A          224 WVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSIL  279 (423)
T ss_dssp             EEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEE
T ss_pred             EEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEE
Confidence            9999999999999999764    399999999999999999999995   6999999999985

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.96  E-value=3.7e-30  Score=231.95  Aligned_cols=130  Identities=19%  Similarity=0.246  Sum_probs=110.8

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--CCCe
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSDQ  252 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~  252 (316)
                      ...+.||+|+||+||+|.+..++.     .||+|.+..   .....+.|.+|+.+|++|+|||||+++++|.+.  +.+.
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTV-----EVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCe-----EEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence            445789999999999999988775     378887752   344567799999999999999999999998652  2356


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||||+||+|.++|....   .+++..+..|+.||+.||+|||++++ +||||||||+||+
T Consensus       104 ~~lvmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NIL  163 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIF  163 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEE
T ss_pred             EEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhhee
Confidence            899999999999999998754   59999999999999999999999752 5999999999984

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=3.1e-30  Score=237.34  Aligned_cols=128  Identities=18%  Similarity=0.203  Sum_probs=113.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ..|...+.||+|+||+||+|.+..++.     .||||.+.. .....+.+.+|+.+|+.++|||||+++++|.++  +.+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~-----~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--~~~  146 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--DEL  146 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET--TEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCC-----EEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CEE
Confidence            357778999999999999999987765     388888863 233456789999999999999999999999985  899


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||+||+|.+++...    .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus       147 ~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NIL  202 (346)
T 4fih_A          147 WVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSIL  202 (346)
T ss_dssp             EEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEE
Confidence            9999999999999999864    399999999999999999999995   6999999999984

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.96  E-value=2e-30  Score=235.26  Aligned_cols=129  Identities=17%  Similarity=0.143  Sum_probs=114.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||+||+|+...++.     .||+|.+...    ....+.+.+|+.+|++|+|||||++++++.++  
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~-----~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--  104 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSR-----EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD--  104 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCC-----EEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC--
Confidence            468888999999999999999987765     3889988632    23456799999999999999999999999885  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||+||+|.++|....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus       105 ~~~yivmEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNIL  164 (311)
T 4aw0_A          105 EKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENIL  164 (311)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CEEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeE
Confidence            89999999999999999998754   599999999999999999999995   7999999999984

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.96  E-value=2.4e-29  Score=227.85  Aligned_cols=134  Identities=16%  Similarity=0.249  Sum_probs=110.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC--
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS--  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~--  250 (316)
                      ++|...+.||+|+||+||+|++..++.     .||+|.+..  .....+.+.+|+.+|++|+|||||+++++|.+.+.  
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDC-----NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCC-----EEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCC-----EEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence            358888999999999999999987665     388888752  33445679999999999999999999999876321  


Q ss_pred             --------CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 --------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 --------~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                              ..+|||||||.+|+|.++|.........++..++.|+.||+.||+|||++   +||||||||+||+
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NIL  150 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIF  150 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeE
Confidence                    24799999999999999998765333467788899999999999999995   6999999999984

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=1.4e-29  Score=232.27  Aligned_cols=125  Identities=17%  Similarity=0.148  Sum_probs=110.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|++..++.     .||||.++...    .+.+|+.+|+.|+|||||++++++.++  +.+|
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~-----~vAiK~i~~~~----~~~~E~~il~~l~HpnIV~l~~~~~~~--~~~~  126 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGF-----QCAVKKVRLEV----FRVEELVACAGLSSPRIVPLYGAVREG--PWVN  126 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEETTT----CCTHHHHTTTTCCCTTBCCEEEEEEET--TEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCC-----EEEEEEECHHH----hHHHHHHHHHhCCCCCCCcEEEEEEEC--CEEE
Confidence            457777899999999999999987765     38899886422    235799999999999999999999884  8899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||||+||+|.++|....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus       127 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NIL  182 (336)
T 4g3f_A          127 IFMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVL  182 (336)
T ss_dssp             EEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEE
T ss_pred             EEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEE
Confidence            9999999999999998754   599999999999999999999995   7999999999985

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=2.4e-29  Score=232.72  Aligned_cols=147  Identities=14%  Similarity=0.159  Sum_probs=119.8

Q ss_pred             CHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCC-CCcceee
Q 021173          166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQH-PNLCKLL  242 (316)
Q Consensus       166 ~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~H-pnIv~l~  242 (316)
                      ...+++...++|...+.||+|+||.||+|.+.+.........||||.+..  .....+.|.+|+.+|.++.| ||||+|+
T Consensus        55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            33455555678888999999999999999987654322223489999874  33446779999999999965 8999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY  309 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrD  309 (316)
                      |+|.++ .+.+|||||||++|+|.++|+....             ...++|..++.|+.|||.||.|||++   +|||||
T Consensus       135 g~~~~~-~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD  210 (353)
T 4ase_A          135 GACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD  210 (353)
T ss_dssp             EEECCT-TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred             EEEEec-CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence            999764 3678999999999999999986421             23589999999999999999999995   799999


Q ss_pred             cCCCCCC
Q 021173          310 FEMIKTE  316 (316)
Q Consensus       310 lKp~NI~  316 (316)
                      |||+||+
T Consensus       211 LK~~NIL  217 (353)
T 4ase_A          211 LAARNIL  217 (353)
T ss_dssp             CSGGGEE
T ss_pred             cCcccee
Confidence            9999984

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.96  E-value=4.9e-29  Score=222.83  Aligned_cols=128  Identities=14%  Similarity=0.168  Sum_probs=108.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||+||+|.+..++.     .||+|.+...    ......+.+|+.+|+.++|||||++++++.++  
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--   85 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQ-----KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK--   85 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCC-----EEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCC-----EEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC--
Confidence            679999999999999999999877665     3888887532    23356799999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||| +|+|.++|....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        86 ~~~~ivmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NIL  144 (275)
T 3hyh_A           86 DEIIMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLL  144 (275)
T ss_dssp             SEEEEEEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEE
T ss_pred             CEEEEEEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeE
Confidence            8999999999 689999998754   599999999999999999999995   6999999999984

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.96  E-value=3.1e-29  Score=227.65  Aligned_cols=131  Identities=18%  Similarity=0.217  Sum_probs=107.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC--Ce
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS--DQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~--~~  252 (316)
                      ++|...+.||+|+||.||+|++.+.       .||||.+.........+..|+..+.+++|||||+++|+|.+++.  ..
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~-------~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGE-------EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTE-------EEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCE-------EEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceE
Confidence            3466779999999999999998643       38999987544333334556666778899999999999987532  36


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-----PFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~-----~~~IiHrDlKp~NI~  316 (316)
                      +|||||||++|+|.++|+..    .++|..++.|+.|++.||+|||+++     ..+||||||||+||+
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NIL  140 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEE
T ss_pred             EEEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEE
Confidence            89999999999999999875    3999999999999999999999851     137999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.95  E-value=1.8e-29  Score=228.72  Aligned_cols=129  Identities=14%  Similarity=0.060  Sum_probs=105.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECC---CCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGD---DASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~---~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      ++|...+.||+|+||+||+|+...   ++.     .||+|.+...   ......+.+|+.+|++++|||||++++++.++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQ-----LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTC-----EEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCE-----EEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            468888999999999999998743   222     2788877532   22345688999999999999999999999885


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.+|||||||+||+|.++|....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        99 --~~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NIL  158 (304)
T 3ubd_A           99 --GKLYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENIL  158 (304)
T ss_dssp             --TEEEEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEE
T ss_pred             --CEEEEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeE
Confidence              89999999999999999998754   599999999999999999999995   6999999999984

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.94  E-value=2.3e-27  Score=222.92  Aligned_cols=130  Identities=13%  Similarity=0.197  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC---
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARD---  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~---  248 (316)
                      ++|...+.||+|+||+||+|.+..++.     .||||.+...   ....+.+++|+.+|+.|+|||||++++++...   
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~-----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~  128 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQ-----QVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPY  128 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCT
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCC-----EEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccc
Confidence            568889999999999999999987765     3899998642   33456789999999999999999999987642   


Q ss_pred             -CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 -GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 -~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ..+.+|||||||. |+|.++|....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus       129 ~~~~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl  190 (398)
T 4b99_A          129 GEFKSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLL  190 (398)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             ccCCEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccc
Confidence             2367999999996 68999998754   599999999999999999999995   6999999999984

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.94  E-value=7.4e-27  Score=216.89  Aligned_cols=135  Identities=15%  Similarity=0.150  Sum_probs=112.5

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEE
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHA  246 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~  246 (316)
                      +.+....+.|...+.||+|+||+||+|+.+.....  ...||+|.+.... ...++.+|+.+|..+ +|+|||++++++.
T Consensus        14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~--~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~   90 (361)
T 4f9c_A           14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGP--EEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFR   90 (361)
T ss_dssp             HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSC--EEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred             HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCC--CCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence            33445668899999999999999999987422111  1248899886433 345688999999998 5999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++  +.+|||||||++|+|.+++.      .+++.++..|+.||+.||+|||++   +||||||||+||+
T Consensus        91 ~~--~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiL  149 (361)
T 4f9c_A           91 KN--DHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFL  149 (361)
T ss_dssp             ET--TEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EC--CEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeE
Confidence            84  89999999999999999984      389999999999999999999995   7999999999984

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.94  E-value=1.6e-26  Score=226.81  Aligned_cols=131  Identities=15%  Similarity=0.217  Sum_probs=115.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|.+.+.||+|+||.||+|.+..++.     .+|+|.+.. .....+.+.+|+.+|+.|+|||||+|+++|.++  +.
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~-----~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--~~  228 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGN-----NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--NE  228 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS--SE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCC-----EEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--CE
Confidence            3678899999999999999999987775     388888764 334456789999999999999999999999884  89


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||||+||+|.++|....  ..|++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nil  287 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIM  287 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhcc
Confidence            999999999999999997653  2599999999999999999999995   7999999999984

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.93  E-value=5.1e-26  Score=224.24  Aligned_cols=130  Identities=15%  Similarity=0.113  Sum_probs=109.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHH---HHHHHHHhCCCCCcceeeeEEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFI---NDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~---~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      .++|...++||+|+||.||+|+...++.     .||+|.+.+..    .....+.   .++.+++.++|||||+|+++|.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~-----~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~  262 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH  262 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCC-----EEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence            3679999999999999999999988776     38888875311    1122233   3466777889999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++  +.+|||||||.||+|.++|....   .|++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus       263 ~~--~~lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNIL  324 (689)
T 3v5w_A          263 TP--DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANIL  324 (689)
T ss_dssp             CS--SEEEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEE
T ss_pred             EC--CEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeE
Confidence            85  89999999999999999998754   599999999999999999999995   7999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.92  E-value=5.4e-25  Score=200.52  Aligned_cols=149  Identities=29%  Similarity=0.526  Sum_probs=127.2

Q ss_pred             CCccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCC
Q 021173          160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPN  237 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~Hpn  237 (316)
                      .....|++.++....++|...+.||+|+||.||+|.+.++..      |++|.+....  .....|.+|+.+++.++|+|
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~------vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~   88 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL------VAVKRLKEERTQGGELQFQTEVEMISMAVHRN   88 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCC------EEEEECCC-----CCCHHHHHHHGGGTCCCTT
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCE------EEEEEeccccCchHHHHHHHHHHHHHhccCCC
Confidence            456789999999999999999999999999999998765543      8888886432  23346899999999999999


Q ss_pred             cceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       238 Iv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~-~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++++++.+.  +..+|||||+.+|+|.+++..... ...+++..+..|+.|++.||.|||+....+|+||||||+||+
T Consensus        89 iv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil  166 (326)
T 3uim_A           89 LLRLRGFCMTP--TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL  166 (326)
T ss_dssp             BCCCCEEECCS--SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred             ccceEEEEecC--CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence            99999999874  788999999999999999987542 345999999999999999999999952227999999999984

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.91  E-value=2.8e-24  Score=194.06  Aligned_cols=145  Identities=28%  Similarity=0.461  Sum_probs=124.4

Q ss_pred             CCccccCHHHHHHHhCCCCCc------ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-----CchhhHhHHHHHH
Q 021173          160 GTLRNFPLDEVAAACHNFFSD------RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-----SSQGVKEFINDVN  228 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~------~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-----~~~~~~~~~~E~~  228 (316)
                      .....|+++++..++++|...      +.||+|+||.||+|.+.+..       +++|.+..     .....+.|.+|+.
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-------vavK~~~~~~~~~~~~~~~~~~~E~~   82 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-------VAVKKLAAMVDITTEELKQQFDQEIK   82 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCE-------EEEEEECCCTTSCTTTHHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCce-------EEEEEEecccCcchHHHHHHHHHHHH
Confidence            346789999999999999887      89999999999999975432       67776653     2334567999999


Q ss_pred             HHHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEe
Q 021173          229 TLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFY  308 (316)
Q Consensus       229 ~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHr  308 (316)
                      +++.++|+||+++++++.+.  +..++||||+++|+|.+++........+++..++.|+.|++.||.|||+.   +|+||
T Consensus        83 ~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~  157 (307)
T 2nru_A           83 VMAKCQHENLVELLGFSSDG--DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHR  157 (307)
T ss_dssp             HHHHCCCTTBCCEEEEECSS--SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred             HHHhcCCCCeEEEEEEEecC--CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecC
Confidence            99999999999999999874  78999999999999999998644344699999999999999999999995   69999


Q ss_pred             ccCCCCCC
Q 021173          309 YFEMIKTE  316 (316)
Q Consensus       309 DlKp~NI~  316 (316)
                      ||||+||.
T Consensus       158 dlkp~Nil  165 (307)
T 2nru_A          158 DIKSANIL  165 (307)
T ss_dssp             CCCGGGEE
T ss_pred             CCCHHHEE
Confidence            99999984

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=2.5e-24  Score=196.63  Aligned_cols=131  Identities=11%  Similarity=0.091  Sum_probs=116.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+.........+.+|+.+|+.++||||+++++++.+.  +..
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~~   76 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKK-----TYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM--EEL   76 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--TEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCc-----EEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC--CEE
Confidence            4678888999999999999999987765     378888876666667799999999999999999999999884  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||||++|+|.+++....  ..+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl  134 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENII  134 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEE
Confidence            99999999999999997653  2599999999999999999999995   7999999999984

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.91  E-value=2.4e-24  Score=194.97  Aligned_cols=130  Identities=19%  Similarity=0.363  Sum_probs=114.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+.. .....+.|.+|+.++++++|+||+++++++.++  +..
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~-----~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~~   82 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGE-----VMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD--KRL   82 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCC-----EEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TEE
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCc-----EEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC--Cee
Confidence            467778999999999999999987665     377887653 455677899999999999999999999999884  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil  140 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCL  140 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred             EEEEEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEE
Confidence            99999999999999998753  2599999999999999999999995   6999999999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.91  E-value=1.2e-24  Score=206.96  Aligned_cols=139  Identities=10%  Similarity=0.020  Sum_probs=118.5

Q ss_pred             CHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCccee
Q 021173          166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       166 ~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      .+.++....++|...++||+|+||.||+|.+..++.     .+|+|.+...    ......+.+|+.++..++|+||+++
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~-----~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l  139 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADK-----VFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL  139 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCc-----EEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            344555567899999999999999999999988765     3788887531    1223458999999999999999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++|.+.  +.+|||||||++|+|.++|....  ..+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       140 ~~~~~~~--~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NIL  207 (437)
T 4aw2_A          140 HYAFQDD--NNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNIL  207 (437)
T ss_dssp             EEEEECS--SEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEeeC--CEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHee
Confidence            9999884  88999999999999999998742  2599999999999999999999994   7999999999984

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.91  E-value=3e-24  Score=195.30  Aligned_cols=134  Identities=16%  Similarity=0.216  Sum_probs=115.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +.|...++||+|+||.||+|.+..++.     .|++|.+...  ....+.+.+|+.+|++++|+||+++++++.......
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGD-----LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH   83 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCc-----EEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce
Confidence            457788999999999999999987654     3888888632  233567889999999999999999999998764558


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++........+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  144 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIM  144 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEE
Confidence            899999999999999998764344599999999999999999999995   6999999999983

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.91  E-value=7.2e-25  Score=199.55  Aligned_cols=142  Identities=32%  Similarity=0.583  Sum_probs=120.6

Q ss_pred             ccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceee
Q 021173          164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       164 ~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~  242 (316)
                      .+.+.++...+++|...+.||+|+||.||+|.+.++..      +++|.+.. .....+.|.+|+.+++.++|+||++++
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~  101 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK------VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLI  101 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCE------EEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEE
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCE------EEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence            35555667788999999999999999999999765543      78887763 344567899999999999999999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~-~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++.+.  +..++||||+++|+|.+++..... ...++|..++.++.||+.||.|||++   +|+||||||+||.
T Consensus       102 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil  171 (321)
T 2qkw_B          102 GFCDER--NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINIL  171 (321)
T ss_dssp             EECCCT--TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEE
T ss_pred             EEEcCC--CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEE
Confidence            999874  789999999999999999976532 23599999999999999999999995   7999999999984

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.91  E-value=5.3e-24  Score=194.27  Aligned_cols=140  Identities=17%  Similarity=0.165  Sum_probs=119.6

Q ss_pred             cccCHHHHHHHhCC----------CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHH
Q 021173          163 RNFPLDEVAAACHN----------FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLA  231 (316)
Q Consensus       163 ~~~~~~ei~~~t~~----------f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~  231 (316)
                      ..++++++..+++.          |...+.||+|+||.||+|.+..++.     .|++|.+.. .....+.+.+|+.+++
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~-----~vavK~~~~~~~~~~~~~~~E~~~l~   97 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGR-----QVAVKMMDLRKQQRRELLFNEVVIMR   97 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEETTTCCSHHHHHHHHHHHT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCc-----EEEEEEEeccchhHHHHHHHHHHHHH
Confidence            45888998888764          5566789999999999999986554     388888763 3344567899999999


Q ss_pred             hCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccC
Q 021173          232 SLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE  311 (316)
Q Consensus       232 ~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlK  311 (316)
                      .++|+||+++++++...  +..+|||||+++|+|.+++...    .+++..+..++.|++.||.|||+.   +|+|||||
T Consensus        98 ~l~h~niv~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlk  168 (321)
T 2c30_A           98 DYQHFNVVEMYKSYLVG--EELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIK  168 (321)
T ss_dssp             TCCCTTBCCEEEEEEET--TEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred             hCCCCCcceEEEEEEEC--CEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCC
Confidence            99999999999999884  8899999999999999998754    499999999999999999999995   69999999


Q ss_pred             CCCCC
Q 021173          312 MIKTE  316 (316)
Q Consensus       312 p~NI~  316 (316)
                      |+||+
T Consensus       169 p~NIl  173 (321)
T 2c30_A          169 SDSIL  173 (321)
T ss_dssp             GGGEE
T ss_pred             HHHEE
Confidence            99984

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=2.7e-24  Score=193.28  Aligned_cols=127  Identities=11%  Similarity=0.069  Sum_probs=109.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      +.|...+.||+|+||.||+|.+..++.     .|++|.+...    ....+.|.+|+.++.+++|+||+++++++.++  
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~--  103 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDR-----QVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR--  103 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTE-----EEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCc-----eEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC--
Confidence            467888999999999999999987654     3899988743    23347799999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..||||||++|++|.+++...     ....+++.|+.||+.||.|||++   +|+||||||+||+
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIl  161 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVR  161 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred             CcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEE
Confidence            8899999999999999999542     45567889999999999999995   6999999999984

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.91  E-value=3.6e-24  Score=189.84  Aligned_cols=129  Identities=17%  Similarity=0.279  Sum_probs=114.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.++..      +++|.+.......+.|.+|+.++++++|+||+++++++.+.  +..+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~------vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~   81 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--APIC   81 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEE------EEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSEE
T ss_pred             hhceeeheecCCCccEEEEEEecCCCe------EEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecC--CceE
Confidence            467778999999999999999976543      88998886666667899999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil  138 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCL  138 (269)
T ss_dssp             EEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             EEEEeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEE
Confidence            9999999999999997653  2599999999999999999999995   6999999999984

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.91  E-value=5.2e-24  Score=192.18  Aligned_cols=129  Identities=21%  Similarity=0.233  Sum_probs=112.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+.. .....+.+.+|+.+++.++||||+++++++...  +.
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~   91 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQ-----EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG--DE   91 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCC-----EEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCc-----EEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC--CE
Confidence            3578899999999999999999876654     378887752 223356689999999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++...    .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil  148 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL  148 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEE
Confidence            99999999999999999875    399999999999999999999995   6999999999984

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.91  E-value=1.2e-24  Score=205.34  Aligned_cols=135  Identities=11%  Similarity=0.044  Sum_probs=115.8

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeee
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLG  243 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g  243 (316)
                      .++....++|...+.||+|+||.||+|.+..++.     .+|+|.+...    ......+.+|+.++..++|||||++++
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~-----~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~  136 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK-----VYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY  136 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCc-----EEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3444456789999999999999999999987765     3788877531    122345889999999999999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|.+.  +.+|||||||+||+|.+++...    .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       137 ~~~~~--~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NIL  200 (410)
T 3v8s_A          137 AFQDD--RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNML  200 (410)
T ss_dssp             EEECS--SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEC--CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHee
Confidence            99874  8899999999999999999864    389999999999999999999995   6999999999984

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.91  E-value=4.5e-24  Score=195.07  Aligned_cols=133  Identities=15%  Similarity=0.273  Sum_probs=113.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++...  ..|++|.+..  .....+.|.+|+.+|+.++|+||+++++++.+.  +.
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~  124 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRD--VPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG--RL  124 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCC--EEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG--GC
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCC--ceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--Cc
Confidence            45777899999999999999997544311  2378888874  344567799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       125 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  183 (325)
T 3kul_A          125 AMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVL  183 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             cEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEE
Confidence            999999999999999997653  2599999999999999999999995   6999999999984

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.91  E-value=2.5e-24  Score=198.58  Aligned_cols=149  Identities=14%  Similarity=0.171  Sum_probs=120.8

Q ss_pred             ccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcce
Q 021173          164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCK  240 (316)
Q Consensus       164 ~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~  240 (316)
                      .+...++....++|...+.||+|+||.||+|.+.+.........|++|.+..  .....+.|.+|+.++.++ +|+||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            3555666677788999999999999999999965422111123489998874  334456799999999999 7999999


Q ss_pred             eeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC----------------------------------------------
Q 021173          241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD----------------------------------------------  274 (316)
Q Consensus       241 l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~----------------------------------------------  274 (316)
                      ++++|.+. ....++|||||.+|+|.+++.....                                              
T Consensus        91 ~~~~~~~~-~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (359)
T 3vhe_A           91 LLGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE  169 (359)
T ss_dssp             EEEEECST-TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred             eeeeeecC-CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence            99999875 3568999999999999999987532                                              


Q ss_pred             -----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          275 -----------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       275 -----------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                                       ...+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIl  225 (359)
T 3vhe_A          170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL  225 (359)
T ss_dssp             --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEE
Confidence                             11289999999999999999999995   6999999999984

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.91  E-value=3.1e-24  Score=195.17  Aligned_cols=135  Identities=15%  Similarity=0.214  Sum_probs=112.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~-  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+..  .....+.+.+|+.+|++++||||++++++|.+... 
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~   79 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDC-----NYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPE   79 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCC-----EEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSC
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCc-----EEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccc
Confidence            3568888999999999999999986654     388888753  33455779999999999999999999999865321 


Q ss_pred             ------------------------------------------------------CeEEEEEecCCCCCHHHHHhcCCCCC
Q 021173          251 ------------------------------------------------------DQRMLIYERLFHGSLDRLIYGRSDGP  276 (316)
Q Consensus       251 ------------------------------------------------------~~~~lV~Ey~~~GsL~~~L~~~~~~~  276 (316)
                                                                            ...+||||||++|+|.+++.......
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~  159 (332)
T 3qd2_B           80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE  159 (332)
T ss_dssp             HHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG
T ss_pred             hhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc
Confidence                                                                  13899999999999999999865444


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          277 PIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       277 ~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...+..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus       160 ~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  196 (332)
T 3qd2_B          160 DREHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIF  196 (332)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEE
Confidence            577888999999999999999995   6999999999984

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.91  E-value=2.5e-24  Score=198.88  Aligned_cols=145  Identities=14%  Similarity=0.115  Sum_probs=126.2

Q ss_pred             CCccccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-----
Q 021173          160 GTLRNFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-----  234 (316)
Q Consensus       160 ~~~~~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----  234 (316)
                      .....+++++.....++|...+.||+|+||.||+|.+..++.     .||+|.+.........+..|+.++..+.     
T Consensus        20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~   94 (360)
T 3llt_A           20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKK-----YYAVKVVRNIKKYTRSAKIEADILKKIQNDDIN   94 (360)
T ss_dssp             CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTT
T ss_pred             ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCe-----EEEEEEeccchhhhhhhHHHHHHHHHhcccCCC
Confidence            445567777777778899999999999999999999976664     3899998866666778889999999997     


Q ss_pred             CCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCC
Q 021173          235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIK  314 (316)
Q Consensus       235 HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~N  314 (316)
                      |+||+++++++...  +..+|||||+ +++|.+++.... ...+++..+..|+.||+.||.|||+.   +||||||||+|
T Consensus        95 h~~iv~~~~~~~~~--~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N  167 (360)
T 3llt_A           95 NNNIVKYHGKFMYY--DHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPEN  167 (360)
T ss_dssp             GGGBCCEEEEEEET--TEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred             CCCeecccceeeEC--CeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCccc
Confidence            99999999999884  8899999999 899999998764 23599999999999999999999995   69999999999


Q ss_pred             CC
Q 021173          315 TE  316 (316)
Q Consensus       315 I~  316 (316)
                      |+
T Consensus       168 Il  169 (360)
T 3llt_A          168 IL  169 (360)
T ss_dssp             EE
T ss_pred             EE
Confidence            84

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.91  E-value=2.8e-24  Score=197.00  Aligned_cols=131  Identities=13%  Similarity=0.167  Sum_probs=114.7

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .||+|.+..   .....+.+.+|+.+|+.++|+||+++++++.++ 
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-   86 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGR-----EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-   86 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-
Confidence            35678889999999999999999976654     388888753   334566789999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..||||||+++|+|.+++....   .+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        87 -~~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIl  146 (328)
T 3fe3_A           87 -KTLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLL  146 (328)
T ss_dssp             -SEEEEEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             -CEEEEEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEE
Confidence             88999999999999999998754   499999999999999999999995   6999999999984

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.90  E-value=5.7e-24  Score=197.51  Aligned_cols=130  Identities=13%  Similarity=0.171  Sum_probs=112.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      .+.|...+.||+|+||.||+|....++.     .+|+|.+....       ...+.+.+|+.+|+.++||||+++++++.
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~   85 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGL-----EYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE   85 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCC-----EEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE
Confidence            4678888999999999999999987665     37777765321       13467899999999999999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.  +.++|||||+.+|+|.++|....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        86 ~~--~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIl  147 (361)
T 2yab_A           86 NR--TDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIM  147 (361)
T ss_dssp             CS--SEEEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             eC--CEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            74  88999999999999999997653   599999999999999999999995   6999999999984

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.90  E-value=1.8e-24  Score=204.33  Aligned_cols=139  Identities=14%  Similarity=0.035  Sum_probs=119.1

Q ss_pred             CHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCccee
Q 021173          166 PLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       166 ~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      .++++....++|...+.||+|+||.||++....++.     .+|+|.+...    ......+.+|+.+|..++|+||+++
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~-----~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l  126 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQ-----VYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL  126 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            455556667899999999999999999999987665     3888887632    2234568999999999999999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++++.+.  +.+||||||+++|+|.++|....  ..+++..+..|+.||+.||+|||+.   +||||||||+||+
T Consensus       127 ~~~~~~~--~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NIL  194 (412)
T 2vd5_A          127 HFAFQDE--NYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNIL  194 (412)
T ss_dssp             EEEEECS--SEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEeeC--CEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHee
Confidence            9999884  88999999999999999998642  2599999999999999999999995   7999999999984

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.90  E-value=4.2e-24  Score=191.08  Aligned_cols=135  Identities=16%  Similarity=0.225  Sum_probs=115.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.  ..+...+++|.+.. .....+.|.+|+.++++++|+||+++++++.+.  +
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   85 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG--D   85 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT--T
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC--C
Confidence            567788999999999999999876542  33445688998864 334457799999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.+|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        86 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  145 (289)
T 4fvq_A           86 ENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNIL  145 (289)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             CCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEE
Confidence            8899999999999999998753  2489999999999999999999995   6999999999984

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.90  E-value=5.6e-24  Score=188.35  Aligned_cols=130  Identities=16%  Similarity=0.259  Sum_probs=114.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.++..      +++|.+.......+++.+|+.++.+++|+||+++++++.++  +..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~------vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~   78 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYD------VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE--YPI   78 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEE------EEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSE
T ss_pred             hhheeeeeeeccCCCceEEEEEecCcee------EEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccC--Cce
Confidence            3567888999999999999999887643      88888876555667899999999999999999999999774  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||.
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil  136 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCL  136 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEE
T ss_pred             EEEEEccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEE
Confidence            99999999999999998753  2499999999999999999999995   6999999999984

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.90  E-value=2.9e-24  Score=189.86  Aligned_cols=133  Identities=20%  Similarity=0.237  Sum_probs=113.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+.+..       +++|.+..   .....+.|.+|+.+++.++|+||+++++++.+...+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~-------~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   82 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQGND-------IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP   82 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEETTEE-------EEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS
T ss_pred             HHhHHHHHhcCCCcceEEEEEECCee-------EEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC
Confidence            46778899999999999999987432       77777763   334556799999999999999999999999875457


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+++|+|.+++.... ...+++..++.|+.|++.||.|||+.+ ..|+||||||+||.
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil  145 (271)
T 3kmu_A           83 HPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVM  145 (271)
T ss_dssp             SCEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEE
T ss_pred             CeEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEE
Confidence            8899999999999999998754 335899999999999999999999964 24999999999984

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.90  E-value=8.8e-24  Score=196.21  Aligned_cols=131  Identities=15%  Similarity=0.187  Sum_probs=114.5

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+++|.+..   .....+.+.+|+.+++.++||||+++++++.++ 
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-  100 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGL-----EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE-  100 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCC-----EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-
Confidence            34678889999999999999999987664     378887753   234456799999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..||||||+.+|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus       101 -~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIl  160 (362)
T 2bdw_A          101 -SFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLL  160 (362)
T ss_dssp             -SEEEEEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEE
T ss_pred             -CEEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEE
Confidence             88999999999999999998654   599999999999999999999995   6999999999984

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.90  E-value=1.2e-23  Score=196.74  Aligned_cols=132  Identities=15%  Similarity=0.111  Sum_probs=114.5

Q ss_pred             hCCCCCcceeeec--CceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEG--LSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G--~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|  +||.||+|.+..++.     .|++|.+..   .....+.+.+|+.+++.++|+|||++++++.+.
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   98 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGE-----YVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD   98 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCC-----EEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCC-----EEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC
Confidence            3568888999999  999999999987665     378887753   234456788999999999999999999999884


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.++||||||++|+|.+++.... ...+++..+..|+.||+.||.|||++   +|+||||||+||+
T Consensus        99 --~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIl  160 (389)
T 3gni_B           99 --NELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL  160 (389)
T ss_dssp             --TEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             --CEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence              88999999999999999998753 23599999999999999999999995   6999999999984

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.90  E-value=3.6e-24  Score=206.81  Aligned_cols=133  Identities=17%  Similarity=0.259  Sum_probs=117.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .|++|.+.......+.|.+|+.+|++++|+||++++++|.+.  +.
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~  290 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PP  290 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTE-----EEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SS
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCe-----EEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecC--Cc
Confidence            34567778999999999999999987553     489999886666678899999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||||.+|+|.++|.... ...+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       291 ~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIl  350 (495)
T 1opk_A          291 FYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCL  350 (495)
T ss_dssp             CEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEE
Confidence            999999999999999998743 33589999999999999999999995   6999999999984

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.90  E-value=1e-23  Score=189.90  Aligned_cols=130  Identities=15%  Similarity=0.209  Sum_probs=113.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC----CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN----PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+.    ......+.|.+|+.++..++|+||+++++++.+. 
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-   83 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNI-----KVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED-   83 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCS-----EEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS-
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCC-----eEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC-
Confidence            3568888999999999999999876664     37778763    2334457799999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+++|+|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||+
T Consensus        84 -~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil  143 (294)
T 4eqm_A           84 -DCYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNIL  143 (294)
T ss_dssp             -SEEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             -CeEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence             88999999999999999998754   599999999999999999999995   6999999999984

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.90  E-value=7.2e-24  Score=197.57  Aligned_cols=133  Identities=15%  Similarity=0.278  Sum_probs=111.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+......  ...|++|.+..  .....+.|.+|+.+|++++|+||+++++++.+.  +.
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~--~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~  120 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKK--EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS--KP  120 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSC--BCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--SS
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCC--ceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--Cc
Confidence            5788889999999999999987621110  01388888874  334566799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       121 ~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  179 (373)
T 2qol_A          121 VMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNIL  179 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             eEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEE
Confidence            999999999999999998653  3599999999999999999999995   6999999999984

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.90  E-value=5.1e-24  Score=197.71  Aligned_cols=130  Identities=14%  Similarity=0.079  Sum_probs=115.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||++....++.     .||+|.+.......+.+.+|+.+++.++|+||+++++++.+.  +..
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~   91 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKE-----LVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTP--THL   91 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCC-----EEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECS--SEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCc-----EEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeC--CEE
Confidence            3568888999999999999999987665     388888875555567789999999999999999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+.+|+|.+++....   .+++..+..|+.|++.||.|||++   +|+||||||+||+
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nil  148 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTL  148 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEE
T ss_pred             EEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            99999999999999997643   499999999999999999999995   6999999999984

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.90  E-value=5.6e-24  Score=195.76  Aligned_cols=129  Identities=13%  Similarity=0.101  Sum_probs=112.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|....++.     .+|+|.+...    ......+.+|+.+|+.++||||+++++++.+.  
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~--   77 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGR-----YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--   77 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS--
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC--
Confidence            568888999999999999999987665     3888887532    23456688999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        78 ~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIl  137 (337)
T 1o6l_A           78 DRLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLM  137 (337)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEE
Confidence            88999999999999999998643   599999999999999999999995   6999999999984

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.90  E-value=1.8e-24  Score=196.46  Aligned_cols=136  Identities=22%  Similarity=0.347  Sum_probs=114.0

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ....++|...+.||+|+||.||+|.+.+..       +++|.+..   .....+.|.+|+.+|++++|+||+++++++.+
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~-------vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  105 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ  105 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTEE-------EEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEECCCc-------EEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            334567888899999999999999885432       77787753   23445679999999999999999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +..+|||||+++|+|.+++........+++..++.++.||+.||.|||+.++ +|+||||||+||+
T Consensus       106 ~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~-~ivH~Dikp~NIl  171 (309)
T 3p86_A          106 P--PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLL  171 (309)
T ss_dssp             T--TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSS-CCCCTTCCGGGEE
T ss_pred             C--CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CEECCCCChhhEE
Confidence            4  7799999999999999999875422348999999999999999999999641 3999999999984

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.90  E-value=2.7e-24  Score=196.16  Aligned_cols=132  Identities=18%  Similarity=0.219  Sum_probs=112.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC--CC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--SD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--~~  251 (316)
                      .++|...+.||+|+||.||+|.+.+.       .||+|.+.........+.+|+.+|++++|+||+++++++....  ..
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLLNE-------YVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEETTE-------EEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             hhhchhhheecccCceEEEEEEECCC-------EEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence            45788889999999999999998742       3889988765555666778999999999999999999998742  23


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-------PFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~-------~~~IiHrDlKp~NI~  316 (316)
                      .++|||||+++|+|.+++...    .+++..++.|+.|++.||.|||+..       ..+|+||||||+||+
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nil  163 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVL  163 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEE
T ss_pred             eEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEE
Confidence            479999999999999999875    3999999999999999999999840       016999999999984

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.90  E-value=4e-24  Score=192.06  Aligned_cols=132  Identities=19%  Similarity=0.252  Sum_probs=112.2

Q ss_pred             CCCCCcceeeecCceEEEEEEEC----CCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFG----DDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~----~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|.+.    .++.     .|++|.+.. .....+.|.+|+.+|++++|+||+++++++...+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   84 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-----VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   84 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCE-----EEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCc-----EEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            56777899999999999999863    2322     388898874 3445678999999999999999999999987643


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++|||||+++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        85 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil  146 (295)
T 3ugc_A           85 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL  146 (295)
T ss_dssp             HTSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEE
Confidence            466899999999999999998753  2499999999999999999999995   6999999999984

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.90  E-value=7.5e-24  Score=189.01  Aligned_cols=130  Identities=13%  Similarity=0.210  Sum_probs=111.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.++..      +++|.+.......+++.+|+.++..++|+||+++++++.+.  +..
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~------vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~   94 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--RPI   94 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEE------EEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCe------EEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecC--CCe
Confidence            3567778999999999999999886643      88898886655667899999999999999999999999874  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil  152 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCL  152 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEE
T ss_pred             EEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEE
Confidence            99999999999999998742  2499999999999999999999995   6999999999984

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.90  E-value=4.8e-24  Score=198.24  Aligned_cols=137  Identities=16%  Similarity=0.241  Sum_probs=112.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+.+.........|++|.+..  .......+.+|+.++++++|+||+++++++.+.  +.
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~  148 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--LP  148 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SS
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC--CC
Confidence            46778899999999999999976432211123489998863  345566799999999999999999999999874  77


Q ss_pred             EEEEEecCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++.....    ...+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl  213 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL  213 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEE
Confidence            8999999999999999986431    23589999999999999999999995   6999999999984

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.90  E-value=6.2e-24  Score=194.08  Aligned_cols=130  Identities=13%  Similarity=0.080  Sum_probs=110.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+..  .....+.+.+|+.+++.++|+||+++++++.+.  +
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~   78 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--N   78 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS--S
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCc-----EEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC--C
Confidence            3678888999999999999999986665     377887753  223346789999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+++|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIl  137 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL  137 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             eEEEEEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEE
Confidence            8999999999999999997653   499999999999999999999995   6999999999984

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.90  E-value=8.2e-24  Score=198.56  Aligned_cols=134  Identities=16%  Similarity=0.216  Sum_probs=115.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +.|...+.||+|+||.||+|.+..++.     .||+|.+...  ....+.+.+|+++|++++|+||+++++++...+...
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~   83 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGD-----LFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH   83 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCc-----EEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCe
Confidence            457788999999999999999987664     3888888632  233567889999999999999999999998764558


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+||||||++|+|.+++........+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  144 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIM  144 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEE
Confidence            899999999999999998754334499999999999999999999995   6999999999983

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.90  E-value=1.3e-23  Score=192.06  Aligned_cols=133  Identities=17%  Similarity=0.324  Sum_probs=109.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++..+ .+.+++|.+..  .....+.|.+|+.++++++|+||++++++|.+   +.
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~   90 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---ST   90 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----C-CEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---SS
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceE-EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---CC
Confidence            45788899999999999999987655422 12368888753  33455789999999999999999999999987   55


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl  149 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVL  149 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             eEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEE
Confidence            889999999999999998753  2599999999999999999999995   6999999999984

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.90  E-value=3.5e-24  Score=204.68  Aligned_cols=132  Identities=18%  Similarity=0.321  Sum_probs=115.0

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ...++|...+.||+|+||.||+|.+.++.      .||||.+.......+.|.+|+.+|++++|+||+++++++..   +
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~------~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~---~  255 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYNKHT------KVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK---E  255 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEETTTE------EEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECS---S
T ss_pred             echHHeEEEEEcccCCceEEEEEEECCcc------EEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeC---C
Confidence            34566888899999999999999997654      38999988666667889999999999999999999999864   6


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+||||||.+|+|.++|.... ...+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil  316 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANIL  316 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEE
T ss_pred             ccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence            7899999999999999998642 22489999999999999999999995   6999999999984

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.90  E-value=8.5e-24  Score=195.74  Aligned_cols=130  Identities=19%  Similarity=0.190  Sum_probs=112.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|+||.||+|++..++.     .+|+|.+...    ....+.+.+|..+|..+ +|+||+++++++.+.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGD-----LYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCC-----EEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC
Confidence            4678889999999999999999987665     3888887632    23345688999999998 699999999999884


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.+|||||||.+|+|.+++....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        97 --~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIL  156 (353)
T 3txo_A           97 --DRLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVL  156 (353)
T ss_dssp             --SEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             --CEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEE
Confidence              88999999999999999998754   499999999999999999999995   6999999999984

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.90  E-value=1.3e-23  Score=195.47  Aligned_cols=138  Identities=15%  Similarity=0.237  Sum_probs=113.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|+||.||+|.+.+...  ......|++|.+...  ....+.|.+|+.+|+.+ +|+||++++++|.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            3567888999999999999998743211  111234889988743  34456799999999999 899999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                        +.+||||||+++|+|.++|.....             ...+++..++.|+.||+.||.|||++   +||||||||+||
T Consensus       160 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI  234 (370)
T 2psq_A          160 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV  234 (370)
T ss_dssp             --SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred             --CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhE
Confidence              789999999999999999986531             13489999999999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      +
T Consensus       235 l  235 (370)
T 2psq_A          235 L  235 (370)
T ss_dssp             E
T ss_pred             E
Confidence            4

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.90  E-value=1.5e-23  Score=191.67  Aligned_cols=129  Identities=14%  Similarity=0.194  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      +.|...+.||+|+||.||+|.+..++.     .+++|.+....       ...+.+.+|+.+|+.++||||+++++++.+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   85 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGL-----QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN   85 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCC-----EEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCc-----EEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            458888999999999999999987664     26777664211       135679999999999999999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +..+|||||+++|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        86 ~--~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl  146 (326)
T 2y0a_A           86 K--TDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIM  146 (326)
T ss_dssp             S--SEEEEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             C--CEEEEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEE
Confidence            4  88999999999999999997643   599999999999999999999995   6999999999984

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.90  E-value=6.2e-24  Score=198.10  Aligned_cols=131  Identities=15%  Similarity=0.246  Sum_probs=113.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+...  ....+.|.+|+.+|++++|+||+++++++...  +
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~  185 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNT-----LVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--Q  185 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS--S
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCe-----EEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC--C
Confidence            3567778999999999999999986554     3889988643  34456799999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+++|+|.+++....  ..+++..++.++.||+.||+|||+.   +|+||||||+||+
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil  245 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCL  245 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEE
Confidence            8999999999999999998642  2489999999999999999999995   6999999999984

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.90  E-value=2e-23  Score=195.58  Aligned_cols=131  Identities=17%  Similarity=0.153  Sum_probs=113.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+... ......+.+|+.+|+.++|+||+++++++.+.  +.
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~-----~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--~~  122 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGR-----VFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--YE  122 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--SE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCC-----EEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC--CE
Confidence            4578888999999999999999987665     3777877643 33456789999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||||+.+|+|.+++....  ..+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIl  181 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIM  181 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeE
Confidence            999999999999999997653  2599999999999999999999995   6999999999984

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.90  E-value=5.5e-24  Score=196.60  Aligned_cols=132  Identities=15%  Similarity=0.147  Sum_probs=112.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      +.|...+.||+|+||.||+|.+..++.     .+++|.+..      .....+.+.+|+.+++.++|+||+++++++.++
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   98 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQ-----QFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD   98 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCC-----EEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            468888999999999999999987665     378887642      122356799999999999999999999999884


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.+|||||||++|+|.+++.... .+..+++..+..|+.||+.||.|||++   +|+||||||+||+
T Consensus        99 --~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl  162 (351)
T 3c0i_A           99 --GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVL  162 (351)
T ss_dssp             --TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             --CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeE
Confidence              88999999999999988886532 233589999999999999999999995   6999999999984

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.90  E-value=1.2e-23  Score=192.56  Aligned_cols=143  Identities=22%  Similarity=0.280  Sum_probs=117.2

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      .+....++|...+.||+|+||.||+|.+.+.........|++|.+..  .....+.|.+|+.+++.++|+||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            33445678999999999999999999986532111112488998874  3344577999999999999999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCc
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSD---------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQV  305 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~I  305 (316)
                      +.  +..+|||||+++|+|.++|.....                     ...+++..++.|+.||+.||.|||++   +|
T Consensus       121 ~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i  195 (343)
T 1luf_A          121 VG--KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF  195 (343)
T ss_dssp             SS--SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             cC--CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence            74  789999999999999999987421                     14699999999999999999999995   69


Q ss_pred             EEeccCCCCCC
Q 021173          306 IFYYFEMIKTE  316 (316)
Q Consensus       306 iHrDlKp~NI~  316 (316)
                      +||||||+||+
T Consensus       196 vH~Dlkp~NIl  206 (343)
T 1luf_A          196 VHRDLATRNCL  206 (343)
T ss_dssp             CCSCCSGGGEE
T ss_pred             ecCCCCcceEE
Confidence            99999999984

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.89  E-value=9.3e-24  Score=197.64  Aligned_cols=129  Identities=15%  Similarity=0.186  Sum_probs=113.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++.     .+|+|.+...    ....+.+.+|+.+|+.++|||||+++++|.+.  
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~-----~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--   87 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKK-----MYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE--   87 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC--
Confidence            568888999999999999999987765     3788877532    23346788999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+.+|+|.+++....   .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIl  147 (384)
T 4fr4_A           88 EDMFMVVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNIL  147 (384)
T ss_dssp             SEEEEEECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeE
Confidence            88999999999999999998754   599999999999999999999995   6999999999984

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.89  E-value=3e-24  Score=191.91  Aligned_cols=134  Identities=16%  Similarity=0.252  Sum_probs=118.5

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .+++|.+.......+.|.+|+.+++.++|+||+++++++.++  +
T Consensus        10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~   82 (288)
T 3kfa_A           10 MERTDITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--P   82 (288)
T ss_dssp             CCGGGEEEEEESGGGTTCSEEEEEEGGGTE-----EEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred             ccccceeEEeecCCCCceeEEEeEecCCCE-----EEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--C
Confidence            345678888999999999999999987654     388998887767778899999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+|+|.+++.... ...+++..++.|+.|++.||.|||+.   +|+||||||+||.
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil  143 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCL  143 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEE
T ss_pred             CEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEE
Confidence            8999999999999999998754 34599999999999999999999995   6999999999984

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.89  E-value=6.4e-24  Score=202.78  Aligned_cols=130  Identities=14%  Similarity=0.287  Sum_probs=113.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.++..      ||+|.+.......+.|.+|+.+|++++|+||+++++++.+   +..
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~------vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~~~  253 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTR------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPI  253 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEE------EEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCce------EEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---Cce
Confidence            4567778999999999999999987643      8999988655556789999999999999999999999875   678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+.+|+|.++|.... +..+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nil  312 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANIL  312 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEE
Confidence            99999999999999997532 23589999999999999999999995   6999999999984

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.89  E-value=9.3e-24  Score=190.08  Aligned_cols=131  Identities=16%  Similarity=0.227  Sum_probs=107.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---------------------------hhhHhHHHH
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------------------------QGVKEFIND  226 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~~E  226 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+....                           ...+.+.+|
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E   86 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNT-----YYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE   86 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTE-----EEEEEEEECC-------------------------------CHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCc-----EEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence            4678888999999999999999987664     37777764321                           123568999


Q ss_pred             HHHHHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcE
Q 021173          227 VNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVI  306 (316)
Q Consensus       227 ~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~Ii  306 (316)
                      +.+|+.++|+||+++++++.+...+..+|||||+++|+|.+++...    .+++..+..++.||+.||.|||++   +|+
T Consensus        87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~iv  159 (298)
T 2zv2_A           87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK----PLSEDQARFYFQDLIKGIEYLHYQ---KII  159 (298)
T ss_dssp             HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred             HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence            9999999999999999999874457899999999999998765432    599999999999999999999995   699


Q ss_pred             EeccCCCCCC
Q 021173          307 FYYFEMIKTE  316 (316)
Q Consensus       307 HrDlKp~NI~  316 (316)
                      ||||||+||+
T Consensus       160 H~Dlkp~Nil  169 (298)
T 2zv2_A          160 HRDIKPSNLL  169 (298)
T ss_dssp             CCCCCGGGEE
T ss_pred             ccCCCHHHEE
Confidence            9999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.89  E-value=1.3e-23  Score=191.64  Aligned_cols=129  Identities=15%  Similarity=0.147  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++....++.     .+|+|.+...    ....+.+.+|+.+++.++||||+++++++.+.  
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~--   78 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGR-----YYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA--   78 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS--
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC--
Confidence            568888999999999999999987665     3788877532    12345688999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        79 ~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIl  138 (318)
T 1fot_A           79 QQIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENIL  138 (318)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             CEEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEE
Confidence            88999999999999999998754   499999999999999999999995   6999999999984

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.89  E-value=2e-23  Score=199.03  Aligned_cols=131  Identities=15%  Similarity=0.121  Sum_probs=112.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|....++.     .+++|.+...   ....+.+.+|+.+|+.++||||+++++++.++ 
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~-----~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-   82 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQ-----EYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE-   82 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTE-----EEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS-
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCc-----EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC-
Confidence            34668888999999999999999987765     3777776532   23456789999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+||||||.+|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        83 -~~~~lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIl  142 (444)
T 3soa_A           83 -GHHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLL  142 (444)
T ss_dssp             -SEEEEEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEE
T ss_pred             -CEEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence             88999999999999999998764   599999999999999999999995   6999999999984

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.89  E-value=1.3e-23  Score=197.69  Aligned_cols=129  Identities=12%  Similarity=0.144  Sum_probs=105.8

Q ss_pred             CCCCCc-ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHH-hCCCCCcceeeeEEEc--CCC
Q 021173          175 HNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLA-SLQHPNLCKLLGFHAR--DGS  250 (316)
Q Consensus       175 ~~f~~~-~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~-~l~HpnIv~l~g~~~~--~~~  250 (316)
                      ++|... ++||+|+||.||+|.+..++.     .||+|.+..    ...+.+|+.++. .++|+||+++++++..  .+.
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~-----~vAiK~~~~----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~  131 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQE-----KFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGR  131 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCC-----EEEEEEeCc----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence            456554 689999999999999987665     388888753    245678888874 4589999999998864  223


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||.+|+|.++|.... ...+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus       132 ~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nil  193 (400)
T 1nxk_A          132 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLL  193 (400)
T ss_dssp             EEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             cEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEE
Confidence            67899999999999999998754 33599999999999999999999995   6999999999984

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.89  E-value=2e-23  Score=192.60  Aligned_cols=129  Identities=12%  Similarity=0.151  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+|+|.+..    .....+.+.+|+.++.++ +||||+++++++.++ 
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~-   82 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDR-----IYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-   82 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCC-----EEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC-
Confidence            467888999999999999999987765     377887753    334456688999999988 899999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+||||||+++|+|.+++....   .+++..+..++.||+.||+|||+.   +|+||||||+||+
T Consensus        83 -~~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIl  142 (345)
T 3a8x_A           83 -SRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVL  142 (345)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             -CEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEE
Confidence             88999999999999999998643   499999999999999999999995   6999999999984

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.89  E-value=4.3e-24  Score=190.24  Aligned_cols=131  Identities=19%  Similarity=0.278  Sum_probs=113.4

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..++|...+.||+|+||.||+|.+.++..      +++|.+.......+.|.+|+.+++.++|+||+++++++.+   +.
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~   81 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTK------VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EP   81 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEE------EEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SS
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcE------EEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC---CC
Confidence            34568888999999999999999876543      8888887655566789999999999999999999999875   56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++.... +..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil  141 (279)
T 1qpc_A           82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANIL  141 (279)
T ss_dssp             CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEE
Confidence            899999999999999997542 12489999999999999999999995   6999999999984

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.89  E-value=1.9e-23  Score=199.36  Aligned_cols=130  Identities=15%  Similarity=0.262  Sum_probs=112.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.+.       .||||.++... ..+.|.+|+.+|++++|+||+++++++... .+.+
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~~~-------~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~  262 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYRGN-------KVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGL  262 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTE-------EEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-TSCE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEecCC-------eEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-CCce
Confidence            45677889999999999999998743       38889887443 567899999999999999999999998874 2479


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||||++|+|.++|.... ...+++..++.++.||+.||.|||++   +|+||||||+||+
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil  321 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVL  321 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             EEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEE
Confidence            99999999999999998753 23479999999999999999999995   6999999999984

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.89  E-value=5.8e-24  Score=207.27  Aligned_cols=130  Identities=14%  Similarity=0.287  Sum_probs=113.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.++..      |+||.+.......+.|.+|+.+|++++|+||+++++++.+   +..
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~------vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~  336 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTR------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPI  336 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEE------EEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCce------EEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee---ccc
Confidence            3456677899999999999999987643      8899888655556789999999999999999999999875   678


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||||.+|+|.++|.... +..+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIl  395 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANIL  395 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             eEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEE
Confidence            99999999999999997532 22589999999999999999999995   6999999999984

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.89  E-value=1.4e-23  Score=197.26  Aligned_cols=130  Identities=12%  Similarity=0.145  Sum_probs=110.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~  248 (316)
                      .++|...++||+|+||.||+|++..++.     .+|+|.+..    .......+.+|..+|.++ +||||+++++++.+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~-----~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDR-----IYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            3568888999999999999999988765     377777653    233445688999999887 799999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +.+|||||||.+|+|.+++....   .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       126 --~~~~lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NIL  185 (396)
T 4dc2_A          126 --SRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVL  185 (396)
T ss_dssp             --SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             --CEEEEEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEE
Confidence              88999999999999999998754   499999999999999999999995   6999999999984

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.89  E-value=1.1e-23  Score=194.32  Aligned_cols=132  Identities=17%  Similarity=0.236  Sum_probs=113.2

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEE
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHA  246 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~  246 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .+|+|.+...    ......+..|..+|..+ +||||+++++++.
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~   88 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ   88 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTE-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence            445789999999999999999999987765     3888887632    23345688899999887 8999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.  +.+||||||+++|+|.+++....   .+++..+..++.||+.||+|||++   +|+||||||+||+
T Consensus        89 ~~--~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIl  150 (345)
T 1xjd_A           89 TK--ENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNIL  150 (345)
T ss_dssp             CS--SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             eC--CEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEE
Confidence            84  88999999999999999998743   499999999999999999999995   6999999999984

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.89  E-value=2.1e-23  Score=192.63  Aligned_cols=130  Identities=17%  Similarity=0.204  Sum_probs=107.5

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..+.|...+.||+|+||.||+|.+..++.     .|++|.+... ...+.+.+|+.+|++++|+||+++++++.+.  +.
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~vavK~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~  122 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQK-----PYALKVLKKT-VDKKIVRTEIGVLLRLSHPNIIKLKEIFETP--TE  122 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCc-----EEEEEEeccc-hhHHHHHHHHHHHHhCCCCCCcceeeeEecC--Ce
Confidence            45678888999999999999999987664     3788887643 2346788999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl  180 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLL  180 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             EEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEE
Confidence            999999999999999998754   599999999999999999999995   6999999999984

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.89  E-value=1.6e-23  Score=193.67  Aligned_cols=129  Identities=12%  Similarity=0.103  Sum_probs=112.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ....+.+.+|+.+|+.++||||+++++++.+.  
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--  113 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGN-----HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN--  113 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCC-----EEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC--
Confidence            568888999999999999999987664     3888887532    23346788999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||+++|+|.+++....   .+++..+..|+.||+.||.|||++   +|+||||||+||+
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIl  173 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLL  173 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEE
Confidence            88999999999999999998753   499999999999999999999995   6999999999984

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.89  E-value=2.1e-23  Score=184.84  Aligned_cols=129  Identities=25%  Similarity=0.344  Sum_probs=107.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|.+.+.       .+++|.+...     ....+.+.+|+.+++.++|+||+++++++.+. 
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   78 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFWIGD-------EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-   78 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEETTE-------EEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred             hheeeeeeeccCCCeEEEEEEEcCC-------eEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-
Confidence            5678889999999999999998743       2777776532     23346789999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+++|+|.+++...    .+++..++.++.|++.||.|||+++..+|+||||||+||.
T Consensus        79 -~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil  140 (271)
T 3dtc_A           79 -PNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL  140 (271)
T ss_dssp             ---CEEEEECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEE
T ss_pred             -CceEEEEEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEE
Confidence             7899999999999999999654    4999999999999999999999975334999999999984

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.89  E-value=3.5e-23  Score=184.24  Aligned_cols=133  Identities=17%  Similarity=0.178  Sum_probs=113.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.++..+ +|+||+++++++.+. 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~-   83 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGC-----IYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED-   83 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCc-----eEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-
Confidence            4568888999999999999999986554     378887753   344567789999999999 899999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~-~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+++|+|.+++..... ...+++..++.|+.||+.||.|||++   +|+||||||+||.
T Consensus        84 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl  147 (289)
T 1x8b_A           84 -DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIF  147 (289)
T ss_dssp             -TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             -CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEE
Confidence             889999999999999999986421 13589999999999999999999995   6999999999984

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.89  E-value=1.2e-23  Score=190.52  Aligned_cols=130  Identities=21%  Similarity=0.322  Sum_probs=110.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.+.       .+++|.+.. ....+.|.+|+.+|++++|+||+++++++.    +..+
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~-------~vavK~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----~~~~   75 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAK-------DVAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGACL----NPVC   75 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTE-------EEEEEECSS-TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT----TTTE
T ss_pred             hHeeeeeEeecCCCceEEEEEECCe-------eEEEEEecC-hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc----CCcE
Confidence            4577779999999999999998643       388888863 344578999999999999999999999876    3479


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||+++|+|.+++........+++..++.++.|++.||.|||+.+..+|+||||||+||+
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIl  137 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL  137 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEE
T ss_pred             EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEE
Confidence            99999999999999987643335889999999999999999999954346999999999984

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.89  E-value=3.9e-23  Score=182.51  Aligned_cols=129  Identities=17%  Similarity=0.263  Sum_probs=114.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.++.      .+++|.+.......+.+.+|+.+++.++|+||+++++++.+.  +..+
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~------~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~   79 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWLNKD------KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--APIC   79 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTE------EEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SSCE
T ss_pred             hheeeeeEecCCCceeEEEEEecCCC------eEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccC--CCeE
Confidence            46777899999999999999997654      388898886555567899999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil  136 (267)
T 3t9t_A           80 LVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCL  136 (267)
T ss_dssp             EEECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEE
T ss_pred             EEEeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEE
Confidence            9999999999999998753  2589999999999999999999995   6999999999984

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=3.6e-23  Score=189.81  Aligned_cols=139  Identities=17%  Similarity=0.230  Sum_probs=112.0

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+...........+++|.+..  .....+.+.+|+.+|.++ +||||+++++++... 
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-  121 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS-  121 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC-
Confidence            3467888899999999999999974322111123488888863  234457799999999999 899999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEec
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDG--------------------PPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYY  309 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~--------------------~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrD  309 (316)
                       +..+|||||+++|+|.+++......                    ..+++..++.|+.||+.||.|||++   +|+|||
T Consensus       122 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D  197 (344)
T 1rjb_A          122 -GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD  197 (344)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred             -CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence             7899999999999999999875321                    2389999999999999999999995   699999


Q ss_pred             cCCCCCC
Q 021173          310 FEMIKTE  316 (316)
Q Consensus       310 lKp~NI~  316 (316)
                      |||+||+
T Consensus       198 ikp~NIl  204 (344)
T 1rjb_A          198 LAARNVL  204 (344)
T ss_dssp             CSGGGEE
T ss_pred             CChhhEE
Confidence            9999984

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.89  E-value=3.3e-23  Score=189.49  Aligned_cols=129  Identities=16%  Similarity=0.126  Sum_probs=105.2

Q ss_pred             CCCCCcceeeecCceEEEEEEEC---CCCceeEEEEEeeeecCCC-----chhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFG---DDASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~---~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      ++|...+.||+|+||.||++...   .++.     .+++|.+...     ......+.+|+.+|+.++|+||+++++++.
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   91 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGK-----IFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ   91 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTC-----EEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCc-----EEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence            56888899999999999999984   2332     3788877642     233456889999999999999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..  +.+||||||+++|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        92 ~~--~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nil  153 (327)
T 3a62_A           92 TG--GKLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIM  153 (327)
T ss_dssp             CS--SCEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEE
T ss_pred             cC--CEEEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeE
Confidence            74  88999999999999999998653   489999999999999999999995   6999999999984

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.89  E-value=3.2e-23  Score=184.39  Aligned_cols=130  Identities=14%  Similarity=0.151  Sum_probs=112.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+.. .....+.+.+|+.+++.++|+||+++++++.+.  +.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~   80 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRI-----RRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN--TD   80 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--SE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCc-----EEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--Ce
Confidence            4568888999999999999999988765     267776653 233457799999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++++|.+++....   .+++..+..|+.|++.||.|||+.   +|+||||||+||+
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil  138 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFL  138 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEE
Confidence            999999999999999988754   499999999999999999999995   6999999999984

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.89  E-value=1.5e-23  Score=191.29  Aligned_cols=133  Identities=14%  Similarity=0.219  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++... .+.+++|.+..  .......+.+|+.+++.++|+||+++++++..   +.
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~   88 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESI-KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG---SS   88 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSC-CEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB---SS
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceE-EEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---Cc
Confidence            46777899999999999999987655422 12367777653  23445678899999999999999999999865   67


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        89 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil  147 (325)
T 3kex_A           89 LQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVL  147 (325)
T ss_dssp             EEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEE
T ss_pred             cEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEE
Confidence            999999999999999998752  2589999999999999999999995   6999999999984

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.89  E-value=3.8e-23  Score=184.51  Aligned_cols=133  Identities=17%  Similarity=0.271  Sum_probs=111.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+..+....  ..+++|.+..  .....+.|.+|+.++++++|+||+++++++.+   +
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~   88 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---N   88 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CC--EEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---S
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCc--eEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc---C
Confidence            456888899999999999999986543211  2378887763  33445679999999999999999999999854   6


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+|+|.+++....  ..+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  148 (281)
T 1mp8_A           89 PVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVL  148 (281)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             ccEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEE
Confidence            7899999999999999998653  2599999999999999999999995   6999999999984

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.89  E-value=2.8e-23  Score=192.57  Aligned_cols=137  Identities=15%  Similarity=0.130  Sum_probs=109.2

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC---CCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+.+.........||+|.+...  ...++..|+.++..++   |+||+.+++++... 
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~-  139 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ-  139 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS-
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC-
Confidence            35678888999999999999995322111111123889988643  3456888999998887   99999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRS--DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~--~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+||||||++|+|.++|....  ....+++..++.|+.||+.||+|||++   +||||||||+||+
T Consensus       140 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIl  204 (365)
T 3e7e_A          140 -NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFI  204 (365)
T ss_dssp             -SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEE
T ss_pred             -CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEE
Confidence             88999999999999999997521  133599999999999999999999995   6999999999984

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.89  E-value=3e-23  Score=191.17  Aligned_cols=128  Identities=16%  Similarity=0.170  Sum_probs=111.2

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+|+|.+....   ..+.+|+++|.++ +||||+++++++.+.  +
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~avK~~~~~~---~~~~~E~~~l~~~~~hp~iv~~~~~~~~~--~   89 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNM-----EFAVKIIDKSK---RDPTEEIEILLRYGQHPNIITLKDVYDDG--K   89 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEETTT---CCCHHHHHHHHHHTTSTTBCCEEEEEECS--S
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEccc---CChHHHHHHHHHhcCCCCcCeEEEEEEcC--C
Confidence            45678888999999999999999987764     38888886432   2456789999888 799999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||.+|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl  148 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNIL  148 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEE
Confidence            8999999999999999998754   599999999999999999999995   6999999999984

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.89  E-value=1.1e-22  Score=185.83  Aligned_cols=122  Identities=16%  Similarity=0.165  Sum_probs=107.9

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeEEEEEe
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ++.||+|+||.||+|.+..++.     .+++|.+..  .....+.+|+.++..+. |+||+++++++.+.  +..|||||
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~--~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--~~~~lv~e   86 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQ-----AFAVKIISK--RMEANTQKEITALKLCEGHPNIVKLHEVFHDQ--LHTFLVME   86 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCC-----EEEEEEEEG--GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--SEEEEEEC
T ss_pred             CCccccCCCeEEEEEEECCCCC-----EEEEEEECh--hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC--CEEEEEEE
Confidence            4789999999999999987665     388888753  34466889999999997 99999999999874  88999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        87 ~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl  138 (325)
T 3kn6_A           87 LLNGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLL  138 (325)
T ss_dssp             CCCSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             ccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEE
Confidence            999999999998754   599999999999999999999995   6999999999984

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.89  E-value=5e-23  Score=186.92  Aligned_cols=129  Identities=14%  Similarity=0.210  Sum_probs=109.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+.++..      +++|.+...   ......+.+|+.++++++|+||+++++++.++  
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~------vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--   91 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDSQGRI------VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE--   91 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEETTSCE------EEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS--
T ss_pred             HhhhHhhhhccCCCCeEEEEEEECCCCE------EEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC--
Confidence            4678888999999999999999976543      788877632   22346789999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+.+ +|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        92 ~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl  151 (311)
T 3niz_A           92 RCLTLVFEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLL  151 (311)
T ss_dssp             SCEEEEEECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CEEEEEEcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEE
Confidence            789999999985 8888887653  2599999999999999999999995   7999999999984

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.89  E-value=3.3e-23  Score=187.29  Aligned_cols=138  Identities=19%  Similarity=0.264  Sum_probs=113.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+...........+++|.+..  .....+.+.+|+.+++.++|+||+++++++.+.  +
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~   99 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--G   99 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--S
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC--C
Confidence            456888899999999999999874322111112488888864  334567799999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEecc
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD---------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYF  310 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDl  310 (316)
                      ..++||||+.+|+|.+++.....                     ...+++..++.++.||+.||.|||++   +|+||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di  176 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL  176 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence            89999999999999999987532                     12389999999999999999999995   6999999


Q ss_pred             CCCCCC
Q 021173          311 EMIKTE  316 (316)
Q Consensus       311 Kp~NI~  316 (316)
                      ||+||.
T Consensus       177 kp~NIl  182 (314)
T 2ivs_A          177 AARNIL  182 (314)
T ss_dssp             SGGGEE
T ss_pred             chheEE
Confidence            999984

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.89  E-value=2.4e-23  Score=190.14  Aligned_cols=139  Identities=17%  Similarity=0.219  Sum_probs=115.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+...+.......+++|.+...  ....+.+.+|+.+++.+ +|+||+++++++.+. 
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-  122 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG-  122 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC-
Confidence            34678888999999999999999876543222234788888643  34567799999999999 899999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRS-----------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~-----------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+++|+|.+++....           ....+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus       123 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  196 (333)
T 2i1m_A          123 -GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL  196 (333)
T ss_dssp             -SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred             -CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence             78999999999999999997531           023589999999999999999999995   6999999999984

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.89  E-value=2.4e-23  Score=196.90  Aligned_cols=131  Identities=14%  Similarity=0.188  Sum_probs=111.0

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---------chhhHhHHHHHHHHHhCCCCCcceee
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---------SQGVKEFINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~HpnIv~l~  242 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .+|+|.+...         ......+.+|+.+|++++||||++++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~  206 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCK-----KVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK  206 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCC
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCc-----EEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEE
Confidence            346789999999999999999999987765     3777776421         12234689999999999999999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++..   +..+|||||+++|+|.+++....   .+++..+..|+.|++.||.|||++   +|+||||||+||+
T Consensus       207 ~~~~~---~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIl  271 (419)
T 3i6u_A          207 NFFDA---EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVL  271 (419)
T ss_dssp             EEEES---SEEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             EEEec---CceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEE
Confidence            99865   66899999999999999887653   599999999999999999999995   6999999999984

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.89  E-value=5.3e-23  Score=198.93  Aligned_cols=131  Identities=21%  Similarity=0.255  Sum_probs=111.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--------------hhhHhHHHHHHHHHhCCCCCc
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--------------QGVKEFINDVNTLASLQHPNL  238 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~HpnI  238 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+|+|.+....              ...+.+.+|+.+|+.++||||
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni  108 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHS-----EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNI  108 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCC-----EEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTB
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCc-----EEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCC
Confidence            35678889999999999999999987665     26777765321              234678999999999999999


Q ss_pred             ceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       239 v~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++++.+.  +.++||||||.+|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       109 v~~~~~~~~~--~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  178 (504)
T 3q5i_A          109 IKLFDVFEDK--KYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENIL  178 (504)
T ss_dssp             CCEEEEEECS--SEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CeEEEEEEcC--CEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEE
Confidence            9999999874  88999999999999999997754   499999999999999999999995   6999999999984

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.89  E-value=1.2e-22  Score=184.88  Aligned_cols=132  Identities=18%  Similarity=0.212  Sum_probs=110.9

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||++.+........ ..|++|.+...  ....+.|.+|+.+|+.++|+||+++++++.+.+...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  111 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTG-EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ  111 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CC-EEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCC-cEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence            4677999999999999997643221111 23888888743  34467799999999999999999999999886557899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||+++|+|.+++....    +++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       112 lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil  166 (318)
T 3lxp_A          112 LVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVL  166 (318)
T ss_dssp             EEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEE
Confidence            9999999999999998753    99999999999999999999995   6999999999984

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.89  E-value=5.7e-23  Score=184.84  Aligned_cols=135  Identities=20%  Similarity=0.293  Sum_probs=108.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .|...+.||+|+||.||+|.+........ ..+++|.+...  ....+.+.+|+.+++.++|+||+++++++.+++.+.+
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNTG-EQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSCS-EEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCccC-eEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            46777999999999999999532111101 13888888632  2345779999999999999999999999988655778


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||.
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil  158 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVL  158 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEE
Confidence            99999999999999996543  2599999999999999999999995   6999999999984

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.89  E-value=2.9e-23  Score=185.87  Aligned_cols=132  Identities=16%  Similarity=0.210  Sum_probs=112.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||++.+..++.     .+++|.+..  .....+.+.+|+.+|+.++|+||+++++++.+.  +.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~   94 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGL-----ERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY--HN   94 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--SE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCc-----eEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC--Ce
Confidence            457788999999999999999977664     367777653  233457799999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++.... .+..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl  156 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENIL  156 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEE
Confidence            999999999999999886531 123599999999999999999999995   6999999999984

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.88  E-value=6.8e-23  Score=183.86  Aligned_cols=129  Identities=16%  Similarity=0.199  Sum_probs=109.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.++++++|+||+++++++.++  +
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   74 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--K   74 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--T
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCc-----eEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC--C
Confidence            468888999999999999999987665     378887753   233446789999999999999999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.+ +|.+++....  ..+++..+..|+.|++.||.|||+.   +|+||||||+||+
T Consensus        75 ~~~lv~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil  133 (292)
T 3o0g_A           75 KLTLVFEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLL  133 (292)
T ss_dssp             EEEEEEECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEEEecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            89999999986 6666665532  2599999999999999999999995   6999999999984

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.88  E-value=2.4e-23  Score=188.69  Aligned_cols=132  Identities=15%  Similarity=0.157  Sum_probs=112.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+...    ......|.+|+.++..++|+||+++++++....
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   85 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHR-----DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   85 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCc-----eEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence            4678888999999999999999876664     3888888642    233467899999999999999999999987642


Q ss_pred             C--CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 S--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~--~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  ...||||||+++|+|.+++....   .+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus        86 ~~~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil  148 (311)
T 3ork_A           86 PAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIM  148 (311)
T ss_dssp             TTEEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             CCCcccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEE
Confidence            2  24599999999999999998653   599999999999999999999995   6999999999984

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.88  E-value=1e-22  Score=181.54  Aligned_cols=130  Identities=15%  Similarity=0.194  Sum_probs=113.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+..   .....+.+.+|+.++++++|+||+++++++.+.  
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--   77 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGL-----EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE--   77 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCc-----eEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC--
Confidence            4678889999999999999999987664     377777652   334457789999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        78 ~~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil  137 (284)
T 3kk8_A           78 SFHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLL  137 (284)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEE
Confidence            88999999999999999888754   599999999999999999999995   6999999999984

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.88  E-value=3.2e-23  Score=193.18  Aligned_cols=125  Identities=13%  Similarity=0.153  Sum_probs=104.1

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEe
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      .+.||+|+||.||+|.+..++.     .+++|.+... ....+.|.+|+.+|++++|+||+++++++.+.  +.++||||
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~-----~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--~~~~lv~E  166 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGL-----KLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK--NDIVLVME  166 (373)
T ss_dssp             EEECC-----CEEEEEETTTCC-----EEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--SEEEEEEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCc-----EEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--CEEEEEEe
Confidence            4789999999999999977654     3788887643 34567899999999999999999999999874  88999999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |+++|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       167 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  219 (373)
T 2x4f_A          167 YVDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENIL  219 (373)
T ss_dssp             CCTTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEE
Confidence            999999999987642  2489999999999999999999995   6999999999984

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.88  E-value=3.3e-23  Score=191.83  Aligned_cols=131  Identities=18%  Similarity=0.113  Sum_probs=112.9

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC-CCCCcceeeeEEEc
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL-QHPNLCKLLGFHAR  247 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~  247 (316)
                      ..++|...+.||+|+||.||+|....++.     .+|+|.+...    ....+.+.+|..+|..+ +|+||+++++++.+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDE-----LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEE-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEEC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEc
Confidence            34678889999999999999999987654     3888887632    23346688999999988 79999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +.+||||||+++|+|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus        93 ~--~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIl  153 (353)
T 2i0e_A           93 M--DRLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVM  153 (353)
T ss_dssp             S--SEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             C--CEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEE
Confidence            4  88999999999999999998743   499999999999999999999995   6999999999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.88  E-value=7.8e-23  Score=187.01  Aligned_cols=134  Identities=17%  Similarity=0.314  Sum_probs=113.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+..++..+ .+.+++|.+..  .....+.+.+|+.+++.++|+||+++++++..   +
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~-~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---~   89 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKV-KIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---S   89 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSC-CEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES---S
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceE-EEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec---C
Confidence            356888899999999999999987655422 12367777753  33456789999999999999999999999987   5


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+|+|.+++....  ..+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus        90 ~~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl  149 (327)
T 3lzb_A           90 TVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVL  149 (327)
T ss_dssp             SEEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEE
Confidence            5899999999999999998753  2599999999999999999999995   6999999999984

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.88  E-value=7.6e-23  Score=185.35  Aligned_cols=129  Identities=17%  Similarity=0.195  Sum_probs=110.1

Q ss_pred             CCCCC-cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFS-DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~-~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      +.|.. .+.||+|+||.||+|.+..++.     .|++|.+... ......+.+|+.+|.++ +|+||+++++++.++  +
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~--~   84 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQ-----EYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE--D   84 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCC-----EEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--T
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCc-----EEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC--C
Confidence            44655 3789999999999999876554     3788887533 33456789999999995 699999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+++|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil  143 (316)
T 2ac3_A           85 RFYLVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENIL  143 (316)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             EEEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEE
Confidence            8999999999999999998753   499999999999999999999995   6999999999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.88  E-value=6.6e-23  Score=200.50  Aligned_cols=132  Identities=16%  Similarity=0.130  Sum_probs=113.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|....++.     .+|+|.+...    ......+.+|+.+|..++|+||+++++++.+. 
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~-----~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~-  256 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-  256 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCC-----EEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC-
Confidence            4578888999999999999999987665     3788887532    22345688999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+||||||++||+|.+++.... ...+++..++.|+.||+.||+|||++   +||||||||+||+
T Consensus       257 -~~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNIL  318 (576)
T 2acx_A          257 -DALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENIL  318 (576)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             -CEEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEE
Confidence             88999999999999999998754 33599999999999999999999995   6999999999984

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.88  E-value=7.4e-23  Score=186.67  Aligned_cols=136  Identities=13%  Similarity=0.163  Sum_probs=112.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+........ ..|++|.+.. .....+.|.+|+.++++++|+||+++++++..++.+..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  101 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTG-ALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL  101 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCS-EEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcc-eEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence            567788999999999999999632111000 1388888874 34455679999999999999999999999886545789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl  159 (327)
T 3lxl_A          102 RLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNIL  159 (327)
T ss_dssp             EEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEE
Confidence            99999999999999998642  1499999999999999999999995   7999999999984

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.88  E-value=7.1e-23  Score=191.18  Aligned_cols=138  Identities=17%  Similarity=0.236  Sum_probs=114.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|+||.||+|.+.....  ......+++|.+..  .......+.+|+++++.+ +|+||++++++|.+.
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            3567888999999999999999754221  11123488888864  334457799999999999 899999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                        +..+|||||+.+|+|.+++.....             ...+++..++.|+.||+.||.|||+.   +|+||||||+||
T Consensus       148 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI  222 (382)
T 3tt0_A          148 --GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV  222 (382)
T ss_dssp             --SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred             --CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence              789999999999999999987531             13599999999999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      +
T Consensus       223 l  223 (382)
T 3tt0_A          223 L  223 (382)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.88  E-value=2e-23  Score=189.85  Aligned_cols=143  Identities=19%  Similarity=0.324  Sum_probs=108.2

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFH  245 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~  245 (316)
                      ++....++|...+.||+|+||.||+|.+..++...  ..+++|.+..   .....+.|.+|+.+++.++|+||+++++++
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   94 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSF--VKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVS   94 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC---------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcc--eeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence            33444567999999999999999999987654311  1378888763   345567899999999999999999999999


Q ss_pred             EcCCC----CeEEEEEecCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGS----DQRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~----~~~~lV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .....    ...++||||+.+|+|.+++....   ....+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIl  169 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCM  169 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEE
Confidence            87421    12399999999999999997532   122589999999999999999999995   6999999999984

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.88  E-value=4.5e-23  Score=186.56  Aligned_cols=148  Identities=14%  Similarity=0.172  Sum_probs=118.3

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCccee
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKL  241 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l  241 (316)
                      +...++....++|...+.||+|+||.||+|.+.+.........+++|.+...  ....+.+.+|+.++.++ +|+||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            4445555567789999999999999999998643211111124888988743  33456799999999999 69999999


Q ss_pred             eeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEe
Q 021173          242 LGFHARDGSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFY  308 (316)
Q Consensus       242 ~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHr  308 (316)
                      ++++... ....++||||+++|+|.+++.....             ...+++..++.++.|++.||.|||+.   +|+||
T Consensus        97 ~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~  172 (316)
T 2xir_A           97 LGACTKP-GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR  172 (316)
T ss_dssp             EEEECCT-TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred             EEEEecC-CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence            9998764 3568999999999999999987542             12288999999999999999999995   69999


Q ss_pred             ccCCCCCC
Q 021173          309 YFEMIKTE  316 (316)
Q Consensus       309 DlKp~NI~  316 (316)
                      ||||+||.
T Consensus       173 dikp~Nil  180 (316)
T 2xir_A          173 DLAARNIL  180 (316)
T ss_dssp             CCSGGGEE
T ss_pred             cCccceEE
Confidence            99999984

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.88  E-value=1.3e-22  Score=182.33  Aligned_cols=134  Identities=19%  Similarity=0.323  Sum_probs=110.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..|...+.||+|+||.||+|.+.++...  ...+++|.+..  .....+.|.+|+.++++++|+||+++++++... .+.
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~  101 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGK--KIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGS  101 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-------CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCc--eeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-CCc
Confidence            3577779999999999999997654321  12377887763  334567799999999999999999999997664 367


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus       102 ~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil  160 (298)
T 3f66_A          102 PLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCM  160 (298)
T ss_dssp             CEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             eEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEE
Confidence            899999999999999998643  3589999999999999999999995   6999999999984

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=4.3e-23  Score=192.36  Aligned_cols=132  Identities=20%  Similarity=0.353  Sum_probs=110.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...+.||+|+||.||+|.+.+...  ....+++|.+..  .....+.|.+|+.++++++|+||++++++|... .+..+
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~-~~~~~  167 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPL  167 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTT--EEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-SSCCE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCC--cEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-CCCeE
Confidence            5556899999999999999854332  123478888763  345567899999999999999999999998654 36789


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       168 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl  224 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCM  224 (373)
T ss_dssp             EEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             EEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEE
Confidence            9999999999999998653  3589999999999999999999995   6999999999984

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.88  E-value=3.5e-23  Score=187.89  Aligned_cols=129  Identities=13%  Similarity=0.077  Sum_probs=107.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||+||+|.+..++.     .||+|.+..   .......+..|+..+.++ +|+||++++++|.+.  
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~--  129 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGR-----LYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG--  129 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSC-----EEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCe-----EEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC--
Confidence            568888999999999999999986654     388887753   233344566677666665 899999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.++|||||+ +|+|.+++....  ..++|..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       130 ~~~~lv~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl  189 (311)
T 3p1a_A          130 GILYLQTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIF  189 (311)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CEEEEEEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEE
Confidence            8899999999 679999888753  2599999999999999999999995   6999999999984

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.88  E-value=1.1e-22  Score=182.18  Aligned_cols=128  Identities=18%  Similarity=0.265  Sum_probs=109.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..+..      +++|.+....   .....+.+|+.+++.++|+||+++++++.+.  +
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~------~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   73 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGET------FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--K   73 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCE------EEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS--S
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCE------EEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC--C
Confidence            467888999999999999999855443      7888776332   2246788999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.+ +|.+++....  ..+++..+..++.||+.||.|||++   +|+||||||+||.
T Consensus        74 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  132 (288)
T 1ob3_A           74 RLVLVFEHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLL  132 (288)
T ss_dssp             CEEEEEECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             eEEEEEEecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence            89999999985 9999998653  2599999999999999999999995   6999999999984

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.88  E-value=7.7e-23  Score=186.21  Aligned_cols=130  Identities=12%  Similarity=0.152  Sum_probs=111.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+....       ...+.+.+|+.+++.++|+||+++++++.
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   85 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGL-----EYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE   85 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCe-----EEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            3558888999999999999999987654     26777664211       13567999999999999999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.  +..++||||+++|+|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        86 ~~--~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl  147 (321)
T 2a2a_A           86 NR--TDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIM  147 (321)
T ss_dssp             CS--SEEEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             cC--CEEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEE
Confidence            74  88999999999999999998653   589999999999999999999995   6999999999984

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.88  E-value=5.4e-23  Score=187.93  Aligned_cols=129  Identities=12%  Similarity=0.057  Sum_probs=110.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||+|....++.     .||+|.+... .....+.+|+.+++.+ +|+||+++++++...  +.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~-~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--~~   79 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNE-----YVAIKLEPMK-SRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCG--KY   79 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTE-----EEEEEEEETT-CSSCCHHHHHHHHHHHCSCTTSCCEEEEEEET--TE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCc-----EEEEEEeccc-cchHHHHHHHHHHHHhhCCCCCCEEEEEEecC--Cc
Confidence            3678888999999999999999876664     3888877533 2345789999999999 899999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+ +|+|.+++....  ..+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nil  137 (330)
T 2izr_A           80 NAMVLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFL  137 (330)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             cEEEEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHee
Confidence            99999999 999999998752  2599999999999999999999995   6999999999984

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.88  E-value=6.5e-23  Score=195.86  Aligned_cols=130  Identities=11%  Similarity=0.133  Sum_probs=103.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC--
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--  249 (316)
                      ++|...+.||+|+||.||+|.+..++.     .||+|.+..   .....+.+.+|+.+|+.++|+|||++++++....  
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  127 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKR-----VVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE  127 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--C-----EEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCc-----EEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc
Confidence            578888999999999999999887664     388888763   3345577999999999999999999999986532  


Q ss_pred             -CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       .+.+||||||+ +|+|.+++....   .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       128 ~~~~~~lv~e~~-~~~L~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NIL  188 (458)
T 3rp9_A          128 KFDELYVVLEIA-DSDFKKLFRTPV---YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCL  188 (458)
T ss_dssp             TCCCEEEEECCC-SEEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             cCceEEEEEecc-ccchhhhcccCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEE
Confidence             36799999998 569999998753   599999999999999999999995   6999999999984

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.88  E-value=2.7e-23  Score=189.16  Aligned_cols=143  Identities=19%  Similarity=0.233  Sum_probs=119.6

Q ss_pred             cCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeee
Q 021173          165 FPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLG  243 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g  243 (316)
                      +++.++....++|...+.||+|+||.||+|.+..++.     .+++|.+.........+.+|+.++.++ +|+||+++++
T Consensus        14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   88 (326)
T 2x7f_A           14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ-----LAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYG   88 (326)
T ss_dssp             --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEE
T ss_pred             ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCC-----eEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeee
Confidence            4444455567789999999999999999999976554     378888765555667899999999999 7999999999


Q ss_pred             EEEcCC----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDG----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++....    .+..+|||||+.+|+|.+++.... ...+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        89 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl  161 (326)
T 2x7f_A           89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVL  161 (326)
T ss_dssp             EEEECC--CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred             EEeeccCccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEE
Confidence            998632    367899999999999999998753 23599999999999999999999995   6999999999984

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.88  E-value=1.4e-22  Score=183.12  Aligned_cols=129  Identities=20%  Similarity=0.218  Sum_probs=112.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...   ....+.+.+|+.++++++|+||+++++++.+.  +
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~   75 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQ-----IVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK--R   75 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--T
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCc-----EEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC--C
Confidence            568888999999999999999987654     3788877532   23356788999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.+++|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil  134 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENIL  134 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             eEEEEEEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEE
Confidence            8999999999999999887653   499999999999999999999995   6999999999984

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.88  E-value=2.3e-22  Score=180.16  Aligned_cols=131  Identities=15%  Similarity=0.165  Sum_probs=110.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      +|....+||+|+||.||+|.+..++.     .|++|.+.. .....+.+.+|+.+++.++|+||+++++++...  +..+
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~   95 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQV-----RIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN--GFIK   95 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCC-----EEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET--TEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCe-----EEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC--CcEE
Confidence            45555799999999999999977664     378887753 334457799999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++........+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  154 (295)
T 2clq_A           96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVL  154 (295)
T ss_dssp             EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEE
Confidence            9999999999999998764344578999999999999999999995   6999999999984

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.88  E-value=8.4e-23  Score=183.52  Aligned_cols=127  Identities=19%  Similarity=0.269  Sum_probs=106.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHh--CCCCCcceeeeEEEcC--C
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS--LQHPNLCKLLGFHARD--G  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~--~  249 (316)
                      .++|...+.||+|+||.||+|.+.+.       .||+|.+..  .....+..|.+++..  ++|+||+++++++...  .
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~vavK~~~~--~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~   77 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGE-------NVAVKIFSS--RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHS   77 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTE-------EEEEEEECG--GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETT
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCE-------EEEEEEecc--ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCC
Confidence            46788889999999999999998533       388888763  334556677777777  7899999999987652  1


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH--------EEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH--------~~~~~~IiHrDlKp~NI~  316 (316)
                      ....+|||||+++|+|.+++...    .+++..++.|+.|++.||.|||        +   .+|+||||||+||+
T Consensus        78 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil  145 (301)
T 3q4u_A           78 STQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNIL  145 (301)
T ss_dssp             EEEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEE
T ss_pred             CceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEE
Confidence            35689999999999999999654    4999999999999999999999        6   47999999999984

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.88  E-value=6.3e-23  Score=183.94  Aligned_cols=127  Identities=20%  Similarity=0.295  Sum_probs=107.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+.+.        +++|.+..   .....+.|.+|+.+|+.++|+||+.+++++..   
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~~--------vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---   91 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---   91 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSSE--------EEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcCc--------eEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC---
Confidence            45688889999999999999987653        67776652   34456779999999999999999999997754   


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+++|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil  152 (289)
T 3og7_A           92 PQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIF  152 (289)
T ss_dssp             SSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CccEEEEEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEE
Confidence            67899999999999999997653  3599999999999999999999995   6999999999984

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.88  E-value=4.9e-23  Score=189.39  Aligned_cols=129  Identities=12%  Similarity=0.139  Sum_probs=111.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+...    ......+.+|+.+|+.++||||+++++++.+. 
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~-   81 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQ-----KVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP-   81 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-
Confidence            3578888999999999999999976664     3788877532    22245689999999999999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+ +|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        82 -~~~~lv~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIl  140 (336)
T 3h4j_B           82 -TDIVMVIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLL  140 (336)
T ss_dssp             -SEEEEEECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEE
T ss_pred             -CEEEEEEECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEE
Confidence             8899999999 789999987654   499999999999999999999995   6999999999984

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=1.3e-22  Score=182.00  Aligned_cols=132  Identities=21%  Similarity=0.349  Sum_probs=109.7

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      |...++||+|+||.||+|.+.++....  ..+++|.+..  .....+.|.+|+.+++.++|+||+++++++.+. ....+
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~   99 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNR--IQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP-EGLPH   99 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCE--EEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-SSCCE
T ss_pred             EccCceeccCCCceEEEEEEecCCCce--eeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-CCCcE
Confidence            445588999999999999976544321  2378888763  334567899999999999999999999999864 24459


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+.+|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus       100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil  156 (298)
T 3pls_A          100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCM  156 (298)
T ss_dssp             EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEE
Confidence            9999999999999998743  3589999999999999999999995   6999999999984

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.88  E-value=8.3e-23  Score=184.56  Aligned_cols=138  Identities=17%  Similarity=0.238  Sum_probs=112.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+...........+++|.+...  ....+.+.+|+.++.++ +|+||+++++++.+.  
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--   99 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG--   99 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC--
Confidence            4568888999999999999998632111011124888988743  24457799999999999 899999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD---------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~---------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                      +..+|||||+++|+|.+++.....               ...+++..++.++.||+.||.|||++   +|+||||||+||
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni  176 (313)
T 1t46_A          100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI  176 (313)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence            788999999999999999987532               12489999999999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      .
T Consensus       177 l  177 (313)
T 1t46_A          177 L  177 (313)
T ss_dssp             E
T ss_pred             E
Confidence            4

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=1.2e-22  Score=186.20  Aligned_cols=134  Identities=15%  Similarity=0.269  Sum_probs=111.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..+... ....|++|.+..  .......|.+|+.+++.++|+||+++++++.+.  +.
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~  120 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGK-KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY--KP  120 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---C-CEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SS
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCC-ccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC--CC
Confidence            3566679999999999999998654321 123478888864  334456799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++....  ..+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus       121 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl  179 (333)
T 1mqb_A          121 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNIL  179 (333)
T ss_dssp             EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             cEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEE
Confidence            999999999999999998753  2599999999999999999999995   6999999999984

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.88  E-value=1.2e-22  Score=186.19  Aligned_cols=129  Identities=16%  Similarity=0.158  Sum_probs=112.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++..     +++|.+..    .....+.+.+|+.+++.++|+||+++++++.+.  
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--  113 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEV-----FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN--  113 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCE-----EEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCE-----EEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC--
Confidence            5677889999999999999999877652     66676542    334567799999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+.+++|.+++....   .+++..++.|+.||+.||.|||++   +|+||||||+||.
T Consensus       114 ~~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl  173 (335)
T 2owb_A          114 DFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLF  173 (335)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CeEEEEEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEE
Confidence            88999999999999999988643   499999999999999999999995   6999999999984

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.88  E-value=3e-23  Score=197.68  Aligned_cols=131  Identities=14%  Similarity=0.099  Sum_probs=104.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|....++.     .||+|.+..    .......+.+|+.+|+.++|+||++++++|.+. 
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~-  220 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGR-----YYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-  220 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET-
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCC-----EEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC-
Confidence            3568888999999999999999987665     388887752    334456788999999999999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.++||||||++|+|.+++....   .+++..+..|+.||+.||+|||+.  .+||||||||+||+
T Consensus       221 -~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIl  281 (446)
T 4ejn_A          221 -DRLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLM  281 (446)
T ss_dssp             -TEEEEEECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEE
T ss_pred             -CEEEEEEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEE
Confidence             88999999999999999998653   599999999999999999999972  26999999999984

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.88  E-value=1.2e-22  Score=184.94  Aligned_cols=129  Identities=13%  Similarity=0.186  Sum_probs=109.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---------hhhHhHHHHHHHHHhCCCCCcceeeeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------QGVKEFINDVNTLASLQHPNLCKLLGF  244 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~HpnIv~l~g~  244 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+....         .....+.+|+.+|+.++|+||++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   83 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCK-----KVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF   83 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCc-----EEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeE
Confidence            4568888999999999999999987664     37888775321         223468999999999999999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..   +..++||||+++|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        84 ~~~---~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl  146 (322)
T 2ycf_A           84 FDA---EDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVL  146 (322)
T ss_dssp             EES---SSEEEEEECCTTEETHHHHSTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EcC---CceEEEEecCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence            876   45899999999999999997643   599999999999999999999995   6999999999984

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.88  E-value=2e-23  Score=189.64  Aligned_cols=143  Identities=15%  Similarity=0.246  Sum_probs=115.6

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      ++....++|...+.||+|+||.||+|.+.+.........+++|.+...  ......|.+|+.+++.++|+||+++++++.
T Consensus        19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   98 (322)
T 1p4o_A           19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   98 (322)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence            334456778889999999999999998764211111234889988743  334567999999999999999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRS-------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~-------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.  +..+|||||+.+|+|.+++....       ....+++..++.++.||+.||.|||++   +|+||||||+||.
T Consensus        99 ~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl  170 (322)
T 1p4o_A           99 QG--QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM  170 (322)
T ss_dssp             SS--SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred             cC--CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence            74  78999999999999999997531       013479999999999999999999995   6999999999984

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.88  E-value=7.8e-23  Score=186.99  Aligned_cols=130  Identities=15%  Similarity=0.180  Sum_probs=110.3

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .|++|.+....   .....+.+|+.+|+.++|+||+++++++.++ 
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-  105 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNE-----TVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN-  105 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTE-----EEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET-
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCc-----eEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC-
Confidence            34578888999999999999999887765     38888886322   2345688999999999999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+.+ +|.+++....   .+++..+..|+.||+.||.|||++   +|+||||||+||+
T Consensus       106 -~~~~lv~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIl  164 (329)
T 3gbz_A          106 -HRLHLIFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLL  164 (329)
T ss_dssp             -TEEEEEEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             -CEEEEEEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEE
Confidence             889999999985 9999998764   499999999999999999999995   6999999999984

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.88  E-value=6.2e-23  Score=184.03  Aligned_cols=133  Identities=14%  Similarity=0.183  Sum_probs=113.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC-----
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD-----  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----  248 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+.......+.+.+|+.+++.++|+||+++++++.+.     
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSR-----YYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK   79 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCe-----EEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence            4568888999999999999999876554     378888765556667899999999999999999999988652     


Q ss_pred             ------CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 ------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ------~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                            ..+..++||||+++|+|.+++....  ..+++..++.++.|++.||.|||++   +|+||||||+||.
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil  148 (303)
T 1zy4_A           80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIF  148 (303)
T ss_dssp             ------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             hhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEE
Confidence                  1367899999999999999998643  2478899999999999999999995   6999999999984

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.88  E-value=1.6e-22  Score=181.50  Aligned_cols=129  Identities=16%  Similarity=0.158  Sum_probs=111.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||++.+..++..     +++|.+..    .....+.+.+|+.+++.++|+||+++++++.+.  
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~-----~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--   87 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEV-----FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN--   87 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCE-----EEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCce-----EEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC--
Confidence            4677889999999999999999876652     66666542    334567789999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+++|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        88 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil  147 (294)
T 2rku_A           88 DFVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLF  147 (294)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEE
Confidence            88999999999999999987643   499999999999999999999995   6999999999984

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=2.9e-23  Score=190.36  Aligned_cols=136  Identities=15%  Similarity=0.135  Sum_probs=111.6

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------CchhhHhHHHHHHHHHhCCCCCcceeeeE
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQHPNLCKLLGF  244 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~  244 (316)
                      ....++|...+.||+|+||.||+|.+..++.     .+++|.+..      .....+.+.+|+.+++.++|+||++++++
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~   96 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRA-----IRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV   96 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCc-----eEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehh
Confidence            4455679999999999999999999977765     277776642      23445779999999999999999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCC-------------------------------------CCCCCHHHHHHHH
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSD-------------------------------------GPPIDWNTRVKIA  287 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------------------------------~~~l~~~~~~~ia  287 (316)
                      +.+.  +..+||||||++|+|.+++.....                                     ...+++..+..|+
T Consensus        97 ~~~~--~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  174 (345)
T 3hko_A           97 YEDE--QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM  174 (345)
T ss_dssp             EECS--SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred             hccC--CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence            9874  889999999999999999862100                                     1123577788999


Q ss_pred             HHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          288 LCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       288 ~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .||+.||.|||+.   +|+||||||+||+
T Consensus       175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIl  200 (345)
T 3hko_A          175 RQIFSALHYLHNQ---GICHRDIKPENFL  200 (345)
T ss_dssp             HHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             HHHHHHHHHHHHC---CccccCCChhhEE
Confidence            9999999999995   6999999999984

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.88  E-value=1.3e-22  Score=180.79  Aligned_cols=129  Identities=14%  Similarity=0.241  Sum_probs=110.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-------chhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-------SQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...       ....+.|.+|+.++++++|+||+++++++.+
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   79 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGK-----EYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN   79 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCC-----eeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC
Confidence            457888999999999999999986554     2666665421       1235679999999999999999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +..++||||+++++|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        80 ~--~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil  140 (283)
T 3bhy_A           80 K--TDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIM  140 (283)
T ss_dssp             S--SEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             C--CeEEEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEE
Confidence            4  88999999999999999997643   599999999999999999999995   7999999999984

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.88  E-value=1.2e-22  Score=181.24  Aligned_cols=133  Identities=16%  Similarity=0.291  Sum_probs=112.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+......  ...+++|.+...  ....+.|.+|+.+++.++|+||+++++++.+   +
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~   85 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGE--KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE---E   85 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCC--EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS---S
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCC--cceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC---C
Confidence            45688889999999999999997654321  124788888743  3456779999999999999999999999875   5


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+.+|+|.+++....  ..+++..++.++.|++.||.|||++   +|+||||||+||+
T Consensus        86 ~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil  145 (281)
T 3cc6_A           86 PTWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNIL  145 (281)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred             CCEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEE
Confidence            6799999999999999998643  2589999999999999999999995   6999999999984

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.88  E-value=9e-23  Score=181.78  Aligned_cols=130  Identities=19%  Similarity=0.198  Sum_probs=112.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+...    ......+.+|+.+++.++|+||+++++++.+. 
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   81 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA-   81 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCc-----EEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-
Confidence            4678888999999999999999987765     3777876421    12245688999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+++|+|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        82 -~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nil  141 (279)
T 3fdn_A           82 -TRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLL  141 (279)
T ss_dssp             -SEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEE
T ss_pred             -CEEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEE
Confidence             88999999999999999998753   499999999999999999999995   6999999999984

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.88  E-value=7.9e-23  Score=197.24  Aligned_cols=129  Identities=17%  Similarity=0.209  Sum_probs=108.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      +.|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.+|+.++||||++++++|.+.  +
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~  109 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHV-----ERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK--R  109 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCC-----EEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS--S
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCc-----EEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC--C
Confidence            458888999999999999999987664     3777776532   23356789999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..|||||||.+|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  168 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLL  168 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEE
Confidence            8999999999999999887754   499999999999999999999995   6999999999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.88  E-value=1.2e-22  Score=195.43  Aligned_cols=130  Identities=18%  Similarity=0.240  Sum_probs=113.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .+.|...+.||+|+||.||+|....++.     .+|+|.+..    .......+.+|+.+|++++||||+++++++.+. 
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-   98 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQ-----ECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK-   98 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCC-----EEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-
Confidence            3468888999999999999999986664     378887742    234467799999999999999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+||||||.+|+|.+++....   .+++..+..|+.||+.||.|||++   +|+||||||+||+
T Consensus        99 -~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  158 (484)
T 3nyv_A           99 -GYFYLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLL  158 (484)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             -CEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEE
Confidence             88999999999999999998754   599999999999999999999995   6999999999984

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.88  E-value=4.3e-23  Score=192.45  Aligned_cols=129  Identities=16%  Similarity=0.132  Sum_probs=102.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHH-HHhCCCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNT-LASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~-l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|++..++.     .+|+|.+...    ......+.+|..+ ++.++|+||+++++++.+. 
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~-----~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~-  111 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEV-----FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-  111 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCC-----EEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS-
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCC-----EEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC-
Confidence            568888999999999999999987765     3778877532    2334556777776 5678999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+||||||+.+|+|.+++....   .+++..+..++.||+.||+|||++   +|+||||||+||+
T Consensus       112 -~~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIl  171 (373)
T 2r5t_A          112 -DKLYFVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENIL  171 (373)
T ss_dssp             -SEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             -CEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEE
Confidence             89999999999999999998743   489999999999999999999995   6999999999984

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.88  E-value=8.2e-23  Score=196.27  Aligned_cols=130  Identities=14%  Similarity=0.175  Sum_probs=113.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+...    ......+.+|+.+|+.++||||+++++++.+. 
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~-----~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~-   88 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGH-----KVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP-   88 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCC-----EEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS-
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-
Confidence            3568888999999999999999986654     3888887532    12345789999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+++|+|.+++....   .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        89 -~~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIl  148 (476)
T 2y94_A           89 -SDIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVL  148 (476)
T ss_dssp             -SEEEEEEECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEE
T ss_pred             -CEEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEE
Confidence             88999999999999999998653   599999999999999999999995   6999999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.88  E-value=2.2e-22  Score=191.03  Aligned_cols=131  Identities=16%  Similarity=0.200  Sum_probs=113.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+..   .....+.+.+|+.+|+.++|+||+++++++.....
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~   99 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEK-----NVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDL   99 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTE-----EEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCT
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCc-----EEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCC
Confidence            4678889999999999999999988765     388888863   33445779999999999999999999999876421


Q ss_pred             ---CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 ---DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ---~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         +.+||||||+. |+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       100 ~~~~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NIL  161 (432)
T 3n9x_A          100 LKFDELYIVLEIAD-SDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCL  161 (432)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHHSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CcCCeEEEEEecCC-cCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeE
Confidence               57899999986 59999998753   599999999999999999999995   6999999999984

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=2e-22  Score=188.37  Aligned_cols=131  Identities=11%  Similarity=0.197  Sum_probs=106.3

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARD  248 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~  248 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .||+|.+..   .......+.+|+.+|..+. |+||+++++++..+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~   81 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGE-----VVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD   81 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCC-----EEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCC-----EEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC
Confidence            45789999999999999999999987665     388888753   3445667889999999997 99999999999875


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +...+|||||||. |+|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        82 ~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIl  141 (388)
T 3oz6_A           82 NDRDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNIL  141 (388)
T ss_dssp             TSSCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CCCEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeE
Confidence            4568999999997 5999999864    499999999999999999999995   6999999999984

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.88  E-value=9.3e-23  Score=186.02  Aligned_cols=138  Identities=16%  Similarity=0.233  Sum_probs=109.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+.+.........|++|.+..  .......|.+|+.++++++|+||+++++++.+.  +
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~  106 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--L  106 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC--C
Confidence            356888899999999999999854321111112488898863  345566799999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+++|+|.+++.....    ...+++..++.++.||+.||.|||+.   +|+||||||+||+
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIl  172 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCL  172 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEE
Confidence            78999999999999999987531    13489999999999999999999995   6999999999984

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.88  E-value=1.1e-22  Score=184.98  Aligned_cols=132  Identities=14%  Similarity=0.232  Sum_probs=98.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+...  ......+.+|+.+|+.++|+||+++++++.++  +
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~   76 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGV-----YVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE--N   76 (317)
T ss_dssp             ---------------CEEEEEECSSSCC-----EEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT--T
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCc-----EEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC--C
Confidence            4578888999999999999999876654     3778877532  23346788999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+. |+|.+++....   ....+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl  140 (317)
T 2pmi_A           77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLL  140 (317)
T ss_dssp             EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeE
Confidence            8999999998 59999987532   123589999999999999999999995   6999999999984

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.88  E-value=1.7e-22  Score=184.33  Aligned_cols=134  Identities=21%  Similarity=0.322  Sum_probs=110.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++..   +.+++|.+..  .....+.+.+|+.++.++ +|+||+++++++.+.  +
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~---~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~--~   99 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--G   99 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEE---EEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET--T
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcc---cceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC--C
Confidence            4677789999999999999998766532   2246776653  334456799999999999 899999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+++|+|.+++....             ....+++..++.|+.||+.||.|||+.   +|+||||||+||.
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl  174 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL  174 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEE
Confidence            8999999999999999998652             123599999999999999999999995   6999999999984

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.88  E-value=2.7e-22  Score=180.71  Aligned_cols=133  Identities=12%  Similarity=0.166  Sum_probs=110.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASLQHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|+||.||++.+..++.     .+++|.+...     ......+.+|+.+++.++|+||+++++++..+
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~-----~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLC-----RRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE   78 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCC-----EEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCc-----EEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            4689999999999999999999876654     3788877632     23456799999999999999999999998654


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+..+|||||+.+| |.+++.... ...+++..+..++.||+.||.|||++   +|+||||||+||.
T Consensus        79 ~~~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl  141 (305)
T 2wtk_C           79 EKQKMYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLL  141 (305)
T ss_dssp             ---CEEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CCCeEEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEE
Confidence            457899999999876 777777643 33599999999999999999999995   6999999999984

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.87  E-value=2.1e-22  Score=184.30  Aligned_cols=138  Identities=15%  Similarity=0.240  Sum_probs=112.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~  248 (316)
                      .++|...+.||+|+||.||+|.+.+...  ......|++|.+..  .....+.+.+|+.+++.+ +|+||+++++++.+.
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            3568888999999999999999863211  11122488898874  334567799999999999 899999999999874


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKT  315 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI  315 (316)
                        +..+|||||+.+|+|.+++.....             ...+++..++.++.||+.||.|||+.   +|+||||||+||
T Consensus       114 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI  188 (334)
T 2pvf_A          114 --GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV  188 (334)
T ss_dssp             --SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred             --CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence              789999999999999999987531             12489999999999999999999995   699999999998


Q ss_pred             C
Q 021173          316 E  316 (316)
Q Consensus       316 ~  316 (316)
                      .
T Consensus       189 l  189 (334)
T 2pvf_A          189 L  189 (334)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.87  E-value=2.1e-22  Score=179.15  Aligned_cols=131  Identities=18%  Similarity=0.304  Sum_probs=112.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+....    ...+.+.+|+.+++.++|+||+++++++.+. 
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   83 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGL-----EVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS-   83 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS-
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCc-----eEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC-
Confidence            4578888999999999999999866554     37888775321    2246789999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+++|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        84 -~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  144 (278)
T 3cok_A           84 -NYVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLL  144 (278)
T ss_dssp             -SEEEEEEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEE
T ss_pred             -CeEEEEEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence             88999999999999999998753  3599999999999999999999995   6999999999984

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.87  E-value=2.6e-22  Score=198.65  Aligned_cols=124  Identities=14%  Similarity=0.287  Sum_probs=106.9

Q ss_pred             eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEEec
Q 021173          182 CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYER  259 (316)
Q Consensus       182 ~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey  259 (316)
                      .||+|+||.||+|.+.....   ...||||.++..  ....+.|.+|+.+|++++|+|||+++++|..   +.++|||||
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---~~~~lv~E~  416 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKK---QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EALMLVMEM  416 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSC---EEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---SSEEEEEEC
T ss_pred             EEecCCCcEEEEEEEecCCC---cEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---CCeEEEEEe
Confidence            79999999999998864322   134889988742  3456789999999999999999999999976   569999999


Q ss_pred             CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          260 LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       260 ~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.+|+|.++|....  ..+++..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus       417 ~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NIL  468 (613)
T 2ozo_A          417 AGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVL  468 (613)
T ss_dssp             CTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEE
Confidence            99999999997653  3599999999999999999999995   7999999999984

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.87  E-value=2e-22  Score=180.09  Aligned_cols=130  Identities=18%  Similarity=0.349  Sum_probs=108.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch--------hhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ--------GVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+.....        ..+.|.+|+.++++++|+||+++++++.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKS-----VVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH   93 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCC-----EEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred             ccceehhccccCCceeEEEEEEcCCce-----EEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence            567778999999999999999976654     388888753211        1267899999999999999999999986


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.    .+|||||+++|+|.+++....  ..+++..++.++.|++.||.|||+++ .+|+||||||+||+
T Consensus        94 ~~----~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil  156 (287)
T 4f0f_A           94 NP----PRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIF  156 (287)
T ss_dssp             TT----TEEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEE
T ss_pred             CC----CeEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEE
Confidence            53    379999999999999987653  35999999999999999999999963 13999999999984

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.87  E-value=1.1e-22  Score=181.02  Aligned_cols=138  Identities=14%  Similarity=0.132  Sum_probs=113.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||++.+..++.     .+++|.+..   .....+.+.+|+.++++++|+||+++++++.+...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   79 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGK-----ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN   79 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCc-----EEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC
Confidence            3578888999999999999999986664     377777753   33456679999999999999999999998875435


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCC--CCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGP--FQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~--~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++|+|.+++.... ....+++..++.|+.|++.||.|||+.+.  .+|+||||||+||.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl  148 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF  148 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEE
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEE
Confidence            78999999999999999998632 13359999999999999999999999631  12999999999984

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.87  E-value=1.7e-22  Score=196.69  Aligned_cols=132  Identities=14%  Similarity=0.198  Sum_probs=113.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+|+|.+...    ......+.+|+.+|..++|+||+++++++.+.  
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~-----~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~--  257 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK--  257 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCc-----EEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC--
Confidence            578888999999999999999987665     3788887532    22345688999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD-GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~-~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+||||||++||+|.++|..... ...+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NIL  321 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVL  321 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEE
Confidence            889999999999999999986432 34599999999999999999999995   6999999999984

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.87  E-value=1.7e-22  Score=181.81  Aligned_cols=132  Identities=17%  Similarity=0.247  Sum_probs=112.1

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ..+.|...+.||+|+||.||+|.+..++.     .+++|.+.. .....+.|.+|+.++..++|+||+++++++..+  +
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~   89 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGA-----LAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD--G   89 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCC-----EEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCc-----EEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC--C
Confidence            34678888999999999999999987654     377887763 334567899999999999999999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+++|+|.+++....  ..+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil  149 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVL  149 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred             eEEEEEEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEE
Confidence            8999999999999999987632  2499999999999999999999995   6999999999984

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.87  E-value=2.4e-22  Score=183.33  Aligned_cols=132  Identities=19%  Similarity=0.252  Sum_probs=110.2

Q ss_pred             CCCCCcceeeecCceEEEEEEEC----CCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFG----DDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~----~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|.+.    .++.     .|++|.+.. .....+.|.+|+.+++.++|+||+++++++...+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  115 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGE-----VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG  115 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCE-----EEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCce-----EEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence            45777899999999999999863    2222     388888864 4455678999999999999999999999987754


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ....+|||||+++|+|.+++....  ..+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus       116 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIl  177 (326)
T 2w1i_A          116 RRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNIL  177 (326)
T ss_dssp             --CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CCceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEE
Confidence            457899999999999999998753  2599999999999999999999995   6999999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.87  E-value=1e-22  Score=196.02  Aligned_cols=129  Identities=16%  Similarity=0.212  Sum_probs=112.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .||+|.+..   .......+.+|+.+|++++||||+++++++.+.  +
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~   94 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQ-----EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS--S   94 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCC-----EEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS--S
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCC-----EEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC--C
Confidence            558888999999999999999986654     378887752   223456789999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||||.+|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil  153 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENIL  153 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEE
Confidence            8999999999999999987654   499999999999999999999995   6999999999984

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.87  E-value=2.2e-22  Score=181.57  Aligned_cols=130  Identities=13%  Similarity=0.130  Sum_probs=110.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||++.+..++.     .+++|.+... ....+.+.+|+.+++.++|+||+++++++.+.  +.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   80 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGK-----LFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST--TH   80 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS--SE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCC-----EEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC--CE
Confidence            3568888999999999999999976554     3788877643 23345688999999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl  138 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLL  138 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCE
T ss_pred             EEEEEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEE
Confidence            999999999999999997653   489999999999999999999995   6999999999984

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.87  E-value=2.1e-22  Score=182.54  Aligned_cols=135  Identities=16%  Similarity=0.149  Sum_probs=111.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC-CCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--CC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~  250 (316)
                      .++|...+.||+|+||.||++....++.     .+++|.+. ......+.+.+|+.+++.++|+||+++++++..+  ..
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  102 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGH-----FYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK  102 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCC-----EEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCc-----EEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence            4578888999999999999999866554     37888765 3445567799999999999999999999998742  13


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++||||+.+|+|.+++.... .+..+++..++.|+.||+.||.|||++   +|+||||||+||.
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl  166 (317)
T 2buj_A          103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNIL  166 (317)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence            57899999999999999998621 134699999999999999999999995   6999999999984

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.87  E-value=9.6e-23  Score=187.15  Aligned_cols=131  Identities=14%  Similarity=0.148  Sum_probs=112.9

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---------hhhHhHHHHHHHHHhCCCCCcceeee
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------QGVKEFINDVNTLASLQHPNLCKLLG  243 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~HpnIv~l~g  243 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .|++|.+....         .....+.+|+.+|++++|+||+++++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~   96 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNK-----EVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLD   96 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTE-----EEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEE
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCc-----EEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            34678889999999999999999887765     37888775322         23456889999999999999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCC-CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHG-SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~G-sL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++.+.  +..+|||||+.+| +|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        97 ~~~~~--~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  162 (335)
T 3dls_A           97 IFENQ--GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIV  162 (335)
T ss_dssp             EEECS--SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEeeC--CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEE
Confidence            99874  8899999999777 9999998754   499999999999999999999995   6999999999984

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.87  E-value=3e-22  Score=185.00  Aligned_cols=141  Identities=18%  Similarity=0.163  Sum_probs=117.4

Q ss_pred             ccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC------------chhhHhHHHHHHHHH
Q 021173          164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS------------SQGVKEFINDVNTLA  231 (316)
Q Consensus       164 ~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~------------~~~~~~~~~E~~~l~  231 (316)
                      ...+.++....++|...+.||+|+||.||+|.+..+..      |++|.+...            ....+.+.+|+.+++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~------vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   84 (362)
T 3pg1_A           11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIP------VAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLN   84 (362)
T ss_dssp             HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCE------EEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCe------EEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHH
Confidence            34567888889999999999999999999999877543      777776421            112367999999999


Q ss_pred             hCCCCCcceeeeEEEcC---CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEe
Q 021173          232 SLQHPNLCKLLGFHARD---GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFY  308 (316)
Q Consensus       232 ~l~HpnIv~l~g~~~~~---~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHr  308 (316)
                      .++|+||+++++++...   ....++|||||+. |+|.+++....  ..+++..+..|+.||+.||.|||++   +|+||
T Consensus        85 ~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~  158 (362)
T 3pg1_A           85 HFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHR  158 (362)
T ss_dssp             HCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCC
T ss_pred             hCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEec
Confidence            99999999999998652   2347899999998 68988888653  3599999999999999999999995   69999


Q ss_pred             ccCCCCCC
Q 021173          309 YFEMIKTE  316 (316)
Q Consensus       309 DlKp~NI~  316 (316)
                      ||||+||+
T Consensus       159 Dlkp~NIl  166 (362)
T 3pg1_A          159 DLHPGNIL  166 (362)
T ss_dssp             CCCGGGEE
T ss_pred             CCChHHEE
Confidence            99999984

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.87  E-value=2.7e-22  Score=179.66  Aligned_cols=131  Identities=18%  Similarity=0.211  Sum_probs=110.2

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--CCC
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSD  251 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~  251 (316)
                      |...+.||+|+||.||+|.+..++..     +++|.+..   .....+.|.+|+.+++.++|+||+++++++...  +..
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~-----va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVE-----VAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCE-----EEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceE-----EEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence            55668899999999999999877653     66666642   344567799999999999999999999998652  236


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||||+++|+|.+++....   .+++..++.|+.||+.||.|||+.+ .+|+||||||+||+
T Consensus       103 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil  163 (290)
T 1t4h_A          103 CIVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIF  163 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEE
T ss_pred             eEEEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEE
Confidence            6899999999999999998743   4899999999999999999999964 24999999999984

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.87  E-value=4e-24  Score=195.97  Aligned_cols=128  Identities=12%  Similarity=0.081  Sum_probs=101.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---------chhhHhHHHHHHHHHhCC---------CC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---------SQGVKEFINDVNTLASLQ---------HP  236 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~---------Hp  236 (316)
                      ++|...+.||+|+||.||+|++.+ .      .||+|.+...         ....+.+.+|+.+|+.++         |+
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~~~-~------~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~   92 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIADH-T------PVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTE   92 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEETT-E------EEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCC
T ss_pred             ccchheeeecccCceEEEEEEeCC-c------eEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCC
Confidence            457778999999999999999843 2      3778877532         122367899999999886         77


Q ss_pred             CcceeeeEEEcC----------------------------CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHH
Q 021173          237 NLCKLLGFHARD----------------------------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIAL  288 (316)
Q Consensus       237 nIv~l~g~~~~~----------------------------~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~  288 (316)
                      |||.+++.+...                            +.+.+|||||||++|+|.+.+...    .+++..+..|+.
T Consensus        93 niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~----~~~~~~~~~i~~  168 (336)
T 2vuw_A           93 GFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK----LSSLATAKSILH  168 (336)
T ss_dssp             CBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT----CCCHHHHHHHHH
T ss_pred             chhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc----CCCHHHHHHHHH
Confidence            777776654311                            137899999999999776666442    489999999999


Q ss_pred             HHHHHHHHHH-hcCCCCcEEeccCCCCCC
Q 021173          289 CAAQGLTFLH-EEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       289 qia~gL~yLH-~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+.||.||| +.   +||||||||+||+
T Consensus       169 qi~~aL~~lH~~~---~ivHrDlKp~NIL  194 (336)
T 2vuw_A          169 QLTASLAVAEASL---RFEHRDLHWGNVL  194 (336)
T ss_dssp             HHHHHHHHHHHHH---CCBCSCCCGGGEE
T ss_pred             HHHHHHHHHHHhC---CEeECCCCHHHEE
Confidence            9999999999 74   6999999999984

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.87  E-value=1.3e-22  Score=187.38  Aligned_cols=130  Identities=16%  Similarity=0.227  Sum_probs=113.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..  .....+.+.+|+.+++.++|+||+++++++.+.  +.
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~  105 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGL-----VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--GE  105 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET--TE
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCc-----EEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC--CE
Confidence            568888999999999999999986664     377777753  344457799999999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++|+|.+++....   .+++..+..|+.|++.||.|||+..  +|+||||||+||+
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil  164 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNIL  164 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEE
T ss_pred             EEEEEECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEE
Confidence            999999999999999998754   4999999999999999999999841  5999999999984

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.87  E-value=3.9e-22  Score=198.01  Aligned_cols=124  Identities=13%  Similarity=0.241  Sum_probs=105.7

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.||+|+||.||+|.+.....   ...||||.+...   ....++|.+|+.+|.+++|+|||+++++|..   +..+|||
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---~~~~lv~  448 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKV---VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVM  448 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSC---EEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---SSEEEEE
T ss_pred             CEeccCCCEEEEEEEEcCCCc---ceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCEEEEE
Confidence            579999999999997754321   124888888642   2345789999999999999999999999975   5689999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||++|+|.++|....   .+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       449 E~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NIL  501 (635)
T 4fl3_A          449 EMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVL  501 (635)
T ss_dssp             ECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EccCCCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEE
Confidence            9999999999998653   599999999999999999999995   6999999999984

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.87  E-value=4.8e-22  Score=181.12  Aligned_cols=126  Identities=15%  Similarity=0.167  Sum_probs=110.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...  ..+.+.+|+.+|+.+. |+||+++++++.+......
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNE-----KVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCc-----EEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence            568888999999999999999876664     3888888633  3467899999999997 9999999999987545789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+.+++|.+++..      +++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       109 ~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil  162 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVM  162 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEE
Confidence            999999999999999853      88999999999999999999995   6999999999984

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=4.7e-22  Score=177.94  Aligned_cols=130  Identities=14%  Similarity=0.283  Sum_probs=107.5

Q ss_pred             CCCCcc-eeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFSDR-CISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~~~-~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +|...+ .||+|+||.||+|.+.....   ...+++|.+..  .....+.+.+|+.+++.++|+||+++++++..   +.
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~   83 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKK---QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---EA   83 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---C---CEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES---SS
T ss_pred             HhhhhhccccccCceeEEEeEeccCCC---cceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC---CC
Confidence            344444 89999999999998753221   02378888874  34556789999999999999999999999954   67


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||+.+|+|.+++....  ..+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  142 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVL  142 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             cEEEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEE
Confidence            999999999999999997643  3599999999999999999999995   6999999999984

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.87  E-value=6.7e-23  Score=190.00  Aligned_cols=137  Identities=15%  Similarity=0.157  Sum_probs=106.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchh------------hHhHHHHHHHHHhCCCCCccee
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG------------VKEFINDVNTLASLQHPNLCKL  241 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~E~~~l~~l~HpnIv~l  241 (316)
                      .++|...+.||+|+||.||+|.+..+........|++|.+......            ...+..|+..+..++|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            4578888999999999999999977542211123788877543211            1224556667788899999999


Q ss_pred             eeEEEcCC--CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          242 LGFHARDG--SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       242 ~g~~~~~~--~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++++....  ....+|||||+ +|+|.+++....  ..+++..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nil  184 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLL  184 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEE
Confidence            99987632  24589999999 999999998752  3599999999999999999999995   7999999999984

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.87  E-value=2.5e-22  Score=181.89  Aligned_cols=130  Identities=13%  Similarity=0.080  Sum_probs=113.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+...    ....+.+.+|+.++..++|+||+++++++..+ 
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~-  106 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRER-----IVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID-  106 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTE-----EEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET-
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCe-----EEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC-
Confidence            4678889999999999999999986664     3888887632    22346789999999999999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+++++|.+++....   .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus       107 -~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl  166 (309)
T 2h34_A          107 -GQLYVDMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENIL  166 (309)
T ss_dssp             -TEEEEEEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             -CeEEEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEE
Confidence             88999999999999999998753   499999999999999999999995   6999999999984

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.87  E-value=4.8e-22  Score=179.12  Aligned_cols=128  Identities=18%  Similarity=0.230  Sum_probs=111.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +.|...+.||+|+||.||+|.+..++.     .+++|.+..  .....+.+.+|+.+++.++|+||+++++++.++  +.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   94 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD--TK   94 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCc-----EEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--Ce
Confidence            457778999999999999999876654     378887753  234567899999999999999999999999884  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+++++|.+++...    .+++..++.++.|++.||.|||+.   +|+||||||+||.
T Consensus        95 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  151 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVL  151 (303)
T ss_dssp             EEEEEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEE
Confidence            99999999999999999753    499999999999999999999995   6999999999984

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.87  E-value=1.7e-22  Score=179.85  Aligned_cols=131  Identities=18%  Similarity=0.210  Sum_probs=110.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC-----
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD-----  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-----  248 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+....   ..+.+|+.+++.++|+||+++++++...     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAKHRIDGK-----TYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE   81 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEEETTTCC-----EEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred             ccccceeeeeccCCceEEEEEEEcCCCe-----EEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence            4568888999999999999999985554     37888776432   4678999999999999999999988541     


Q ss_pred             ---------CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 ---------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ---------~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                               .....++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil  154 (284)
T 2a19_B           82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIF  154 (284)
T ss_dssp             -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEE
Confidence                     1255899999999999999997643 23599999999999999999999995   6999999999984

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.87  E-value=3e-22  Score=184.85  Aligned_cols=129  Identities=22%  Similarity=0.284  Sum_probs=109.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      +.|...+.||+|+||.||+|....++.     .|++|.+...    ....+.|.+|+.+|++++|+||+++++++.++  
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--  126 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSE-----VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--  126 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCe-----EEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC--
Confidence            347778999999999999999876664     3788877532    23346799999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+. |+|.+++....  ..+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus       127 ~~~~lv~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  186 (348)
T 1u5q_A          127 HTAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNIL  186 (348)
T ss_dssp             TEEEEEEECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEE
T ss_pred             CeEEEEEecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEE
Confidence            88999999997 68888886532  2599999999999999999999995   6999999999984

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=2.1e-22  Score=183.78  Aligned_cols=132  Identities=14%  Similarity=0.201  Sum_probs=107.3

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC--CCCCcceeeeEEEcCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL--QHPNLCKLLGFHARDG  249 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l--~HpnIv~l~g~~~~~~  249 (316)
                      ...++|...+.||+|+||.||+|.+.+.       .|++|.+...  ....+..|.+++..+  +|+||+++++++....
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~  104 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWRGE-------KVAVKVFFTT--EEASWFRETEIYQTVLMRHENILGFIAADIKGT  104 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEETTE-------EEEEEEEEGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred             ccccceEEEeEeecCCCeEEEEEEECCc-------eEEEEEEecc--ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence            3456799999999999999999998743       3788877533  234455666666655  8999999999998742


Q ss_pred             C--CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEEeccCCCCCC
Q 021173          250 S--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-----PFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~--~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~-----~~~IiHrDlKp~NI~  316 (316)
                      .  ..++|||||+++|+|.+++...    .+++..++.++.|++.||.|||+.+     ..+|+||||||+||+
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nil  174 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL  174 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEE
T ss_pred             CCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEE
Confidence            2  6789999999999999999765    3999999999999999999999851     127999999999984

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.87  E-value=1.6e-22  Score=184.44  Aligned_cols=129  Identities=15%  Similarity=0.204  Sum_probs=108.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc--hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+....  .....+.+|+.+|+.++|+||+++++++.+.  +.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDN-----LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE--KS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS--SC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCc-----EEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC--CE
Confidence            468888999999999999999986654     37888776322  2233567899999999999999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+. |+|.+++....  ..+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        75 ~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl  132 (324)
T 3mtl_A           75 LTLVFEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLL  132 (324)
T ss_dssp             EEEEEECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEE
T ss_pred             EEEEecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEE
Confidence            999999997 59999988753  3599999999999999999999995   6999999999984

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.87  E-value=2.4e-22  Score=179.49  Aligned_cols=129  Identities=17%  Similarity=0.190  Sum_probs=111.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...    ......+.+|+.+++.++|+||+++++++.+.  
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--   86 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKF-----IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR--   86 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCc-----EEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC--
Confidence            568888999999999999999987664     3788877522    12245689999999999999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  146 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLL  146 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEE
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEE
Confidence            88999999999999999998753   499999999999999999999995   6999999999984

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.87  E-value=6.1e-22  Score=177.77  Aligned_cols=130  Identities=16%  Similarity=0.225  Sum_probs=112.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----------hhhHhHHHHHHHHHhCC-CCCcceee
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----------QGVKEFINDVNTLASLQ-HPNLCKLL  242 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-HpnIv~l~  242 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+....          ...+.+.+|+.+++++. |+||++++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~   90 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCK-----EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLK   90 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCc-----eEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeee
Confidence            4678888999999999999999987664     37888775321          22456889999999996 99999999


Q ss_pred             eEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++...  +..+|||||+++|+|.+++....   .+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        91 ~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  156 (298)
T 1phk_A           91 DTYETN--TFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENIL  156 (298)
T ss_dssp             EEEECS--SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             eeeccC--CeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEE
Confidence            999874  88999999999999999998753   499999999999999999999995   6999999999984

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.87  E-value=2.4e-22  Score=184.82  Aligned_cols=128  Identities=14%  Similarity=0.152  Sum_probs=110.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCC--CCcceeeeEEEcC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQH--PNLCKLLGFHARD  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~H--pnIv~l~g~~~~~  248 (316)
                      .+.|...+.||+|+||.||++.+.++..      +|+|.+..   .....+.|.+|+.+|..++|  +||+++++++.+.
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~------vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQI------YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD   81 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCE------EEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCE------EEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC
Confidence            3568888999999999999999866543      77887652   33445779999999999976  9999999999884


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        +..+|||| +.+|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        82 --~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIl  140 (343)
T 3dbq_A           82 --QYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFL  140 (343)
T ss_dssp             --SEEEEEEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             --CEEEEEEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEE
Confidence              88999999 56889999998754   599999999999999999999995   6999999999984

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.87  E-value=2.3e-22  Score=180.32  Aligned_cols=131  Identities=12%  Similarity=0.210  Sum_probs=108.7

Q ss_pred             hCCCCCcc-eeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDR-CISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~-~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+ .||+|+||.||+|.+.....   ...+++|.+...   ....+.|.+|+.+++.++|+||+++++++..  
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--   89 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKV---VKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA--   89 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSS---EEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES--
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCc---eeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC--
Confidence            34566666 99999999999997643221   123788887632   3346779999999999999999999999954  


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+++|+|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        90 -~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil  149 (291)
T 1xbb_A           90 -ESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVL  149 (291)
T ss_dssp             -SSEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             -CCcEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEE
Confidence             77899999999999999998754   499999999999999999999995   6999999999984

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.87  E-value=2.3e-22  Score=182.07  Aligned_cols=143  Identities=18%  Similarity=0.298  Sum_probs=111.4

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFH  245 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~  245 (316)
                      ++....++|...+.||+|+||.||+|.+.......  ..+++|.+..   .....+.|.+|+.++++++|+||+++++++
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~  105 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTS--LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC  105 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCE--EEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCce--eEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence            33444567888899999999999999876533211  2378888763   334457799999999999999999999999


Q ss_pred             EcCCC---CeEEEEEecCCCCCHHHHHhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGS---DQRMLIYERLFHGSLDRLIYGRS---DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~---~~~~lV~Ey~~~GsL~~~L~~~~---~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.+.   ...++||||+++|+|.+++....   ....+++..++.|+.||+.||.|||+.   +|+||||||+||.
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIl  179 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCM  179 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEE
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEE
Confidence            87422   24699999999999999985421   234699999999999999999999995   6999999999984

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.87  E-value=2e-22  Score=178.87  Aligned_cols=130  Identities=13%  Similarity=0.080  Sum_probs=112.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+..  .....+.+.+|+.+++.++|+||+++++++.+.  +
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~   78 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--N   78 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--T
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCc-----EEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC--C
Confidence            3568888999999999999999986654     377787652  234457789999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++||||+++|+|.+++....   .+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil  137 (276)
T 2yex_A           79 IQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL  137 (276)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEEEEecCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEE
Confidence            8999999999999999987643   599999999999999999999995   6999999999984

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=1.6e-22  Score=187.12  Aligned_cols=129  Identities=14%  Similarity=0.100  Sum_probs=109.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECC---CCceeEEEEEeeeecCCC-----chhhHhHHHHHHHHHhC-CCCCcceeeeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGD---DASTSKKFEATVTRLNPS-----SQGVKEFINDVNTLASL-QHPNLCKLLGFH  245 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~---~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~  245 (316)
                      ++|...+.||+|+||.||++....   ++.     .+++|.+...     ....+.+.+|+.+|..+ +|+||+++++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  128 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGK-----LYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF  128 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTC-----EEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCe-----EEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE
Confidence            568888999999999999999842   232     3777877532     23346688999999999 699999999999


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+  +..+|||||+++|+|.++|....   .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus       129 ~~~--~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  191 (355)
T 1vzo_A          129 QTE--TKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENIL  191 (355)
T ss_dssp             EET--TEEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             eeC--ceEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            874  78999999999999999998753   499999999999999999999995   6999999999984

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.87  E-value=4.1e-22  Score=185.70  Aligned_cols=134  Identities=14%  Similarity=0.122  Sum_probs=112.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC--------CCCcceeeeEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--------HPNLCKLLGFH  245 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--------HpnIv~l~g~~  245 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+.......+.+.+|+.+|+.++        |+||+++++++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~  110 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKK-----FVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF  110 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCe-----EEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence            3678888999999999999999887764     3899999876666788999999999995        78899999998


Q ss_pred             EcC--CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARD--GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~--~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...  .....+|||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+++  +|+||||||+||+
T Consensus       111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIl  179 (397)
T 1wak_A          111 KISGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENIL  179 (397)
T ss_dssp             EEEETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEE
T ss_pred             eecCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHee
Confidence            732  136899999999 567777766543 235999999999999999999999951  6999999999984

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.87  E-value=2.6e-22  Score=183.30  Aligned_cols=130  Identities=22%  Similarity=0.347  Sum_probs=102.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHH--HHhCCCCCcceeeeEEEc---C
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNT--LASLQHPNLCKLLGFHAR---D  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~--l~~l~HpnIv~l~g~~~~---~  248 (316)
                      .++|...+.||+|+||.||+|.+.+.       .|++|.+....  ...+..|.++  +..++|+||+++++++..   +
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDER-------PVAVKVFSFAN--RQNFINEKNIYRVPLMEHDNIARFIVGDERVTAD   82 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTE-------EEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT
T ss_pred             hHHhheeeecccCCCeEEEEEEECCe-------EEEEEEeeccc--hhhHHHHHHHHHHHhccCcchhhheecccccccC
Confidence            35688889999999999999987543       38888875332  3345555555  445899999999986543   2


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG------PFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~------~~~IiHrDlKp~NI~  316 (316)
                      +...++|||||+++|+|.+++....    +++..++.|+.||+.||.|||+..      ..+|+||||||+||+
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nil  152 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVL  152 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEE
T ss_pred             CCceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEE
Confidence            2346799999999999999998754    689999999999999999999951      016999999999984

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.86  E-value=4.4e-22  Score=190.71  Aligned_cols=129  Identities=14%  Similarity=0.158  Sum_probs=109.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+..   .....+++.+|+.+|+.++|+||+++++++...+ 
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~  135 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDR-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT  135 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTE-----EEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCC-----EEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCc
Confidence            4678889999999999999999987765     388888763   3345677899999999999999999999997532 


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ...+||||||+.+ +|.+.+..     .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       136 ~~~~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIl  196 (464)
T 3ttj_A          136 LEEFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  196 (464)
T ss_dssp             TTTCCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             cccCCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEE
Confidence               2568999999976 57777754     289999999999999999999995   6999999999984

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.86  E-value=4.3e-22  Score=176.82  Aligned_cols=130  Identities=12%  Similarity=0.141  Sum_probs=112.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+...    ....+.+.+|+.+++.++|+||+++++++... 
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   83 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGH-----KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP-   83 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCc-----eEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC-
Confidence            3578888999999999999999986554     3788877532    22345789999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..+|||||+.+++|.+++....   .+++..+..++.|++.||.|||++   +|+||||||+||.
T Consensus        84 -~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil  143 (276)
T 2h6d_A           84 -TDFFMVMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVL  143 (276)
T ss_dssp             -SEEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEE
T ss_pred             -CeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEE
Confidence             88999999999999999998653   489999999999999999999995   6999999999984

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.86  E-value=8.8e-22  Score=177.43  Aligned_cols=129  Identities=12%  Similarity=0.152  Sum_probs=107.8

Q ss_pred             CCCCCc-ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHH-HhCCCCCcceeeeEEEc--CCC
Q 021173          175 HNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTL-ASLQHPNLCKLLGFHAR--DGS  250 (316)
Q Consensus       175 ~~f~~~-~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l-~~l~HpnIv~l~g~~~~--~~~  250 (316)
                      ++|... +.||+|+||.||++.+..++.     .|++|.+..    ...+.+|+.++ +.++|+||+++++++..  .+.
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~   87 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQE-----KFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAGR   87 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCc-----EEEEEEecc----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence            456555 789999999999999976654     388888753    24577889888 56689999999999875  223


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...+|||||+++|+|.+++.... ...+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil  149 (299)
T 3m2w_A           88 KCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLL  149 (299)
T ss_dssp             EEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             ceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEE
Confidence            67899999999999999998764 33699999999999999999999995   6999999999984

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.86  E-value=4.5e-22  Score=186.45  Aligned_cols=127  Identities=14%  Similarity=0.155  Sum_probs=109.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCC--CCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQ--HPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|.+..+..      +|+|.+..   .....+.|.+|+.+|.+++  |+||+++++++..+ 
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~------vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~-  128 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQI------YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD-  128 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCE------EEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCE------EEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-
Confidence            458888999999999999999876443      78887752   3445678999999999996  59999999999885 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+||||| +.+|+|.++|....   .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       129 -~~~~lv~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIl  187 (390)
T 2zmd_A          129 -QYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFL  187 (390)
T ss_dssp             -SEEEEEEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEE
T ss_pred             -CEEEEEEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEE
Confidence             78999999 66889999998754   589999999999999999999995   6999999999984

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.86  E-value=7.8e-22  Score=178.29  Aligned_cols=134  Identities=18%  Similarity=0.223  Sum_probs=106.5

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC------CchhhHhHHHHHHHHHhCC---CCCcceeee
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP------SSQGVKEFINDVNTLASLQ---HPNLCKLLG  243 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~E~~~l~~l~---HpnIv~l~g  243 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .||+|.+..      .......+.+|+.+++.+.   |+||+++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~   81 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGH-----FVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMD   81 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCC-----EEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCc-----EEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeee
Confidence            35789999999999999999999876654     277776641      1122345778888877775   999999999


Q ss_pred             EEEcCCCC---eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSD---QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~---~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|.....+   .+++||||+. |+|.+++.... ...+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil  152 (308)
T 3g33_A           82 VCATSRTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENIL  152 (308)
T ss_dssp             EEEECCSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEE
T ss_pred             eeeccCCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            99874211   5899999997 59999998764 33499999999999999999999995   6999999999984

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.86  E-value=4.5e-22  Score=181.88  Aligned_cols=129  Identities=18%  Similarity=0.240  Sum_probs=111.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .|++|.+..   .....+.+.+|+.+++.++|+||+++++++.+.  +
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--~   97 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGR-----IVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK--K   97 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCC-----EEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--T
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCc-----eEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC--C
Confidence            567888999999999999999987665     378887642   233456688999999999999999999999874  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+.+++|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        98 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil  156 (331)
T 4aaa_A           98 RWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENIL  156 (331)
T ss_dssp             EEEEEEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             EEEEEEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEE
Confidence            8999999999999988876543   499999999999999999999995   6999999999984

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=4.1e-22  Score=185.22  Aligned_cols=130  Identities=15%  Similarity=0.172  Sum_probs=104.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .+.|...+.||+|+||.||+|.+..++.     .||+|.+..   .....+.+.+|+.+|+.++|+||+++++++...+ 
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~   98 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGA-----KVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET   98 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCC-----EEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCC-----EEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc
Confidence            3568888999999999999999977665     388998853   2334567899999999999999999999987642 


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ...+||||||+ +++|.+++...    .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  160 (367)
T 1cm8_A           99 LDDFTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLA  160 (367)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             cccCceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEE
Confidence               14569999999 88999999864    499999999999999999999995   6999999999984

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.86  E-value=1e-21  Score=176.18  Aligned_cols=129  Identities=13%  Similarity=0.102  Sum_probs=111.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+... .....+.+|+.++..+ +|+||+.+++++.+.  ..
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~-~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~--~~   80 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQ-----QVAIKFEPRR-SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG--LH   80 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTE-----EEEEEEEECC-TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEET--TE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCc-----EEEEEEeccC-CccHHHHHHHHHHHHHhcCCCCCeEEeecCCC--ce
Confidence            3568888999999999999999876654     3788877532 3445789999999999 799999999999874  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+ +|+|.+++....  ..+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus        81 ~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl  138 (298)
T 1csn_A           81 NVLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFL  138 (298)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             eEEEEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence            99999999 999999998753  2599999999999999999999995   6999999999984

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.86  E-value=7.5e-22  Score=183.28  Aligned_cols=137  Identities=14%  Similarity=0.213  Sum_probs=115.1

Q ss_pred             HHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---------hhhHhHHHHHHHHHhC-CCC
Q 021173          167 LDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---------QGVKEFINDVNTLASL-QHP  236 (316)
Q Consensus       167 ~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l-~Hp  236 (316)
                      +.......++|...+.||+|+||.||+|.+..++.     .|+||.+....         ...+.+.+|+.++..+ +|+
T Consensus        86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp  160 (365)
T 2y7j_A           86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGH-----EFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP  160 (365)
T ss_dssp             HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCT
T ss_pred             chhhhhhhhhcccceEEecCCCEEEEEEEECCCCc-----EEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            33444556779999999999999999999975544     37888765322         1245688999999999 799


Q ss_pred             CcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       237 nIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||+++++++...  +..+|||||+++|+|.+++....   .+++..+..|+.||+.||.|||+.   +|+||||||+||.
T Consensus       161 ~iv~~~~~~~~~--~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl  232 (365)
T 2y7j_A          161 HIITLIDSYESS--SFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENIL  232 (365)
T ss_dssp             TBCCEEEEEEBS--SEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CEeEEEEEEeeC--CEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            999999999874  88999999999999999998643   499999999999999999999995   6999999999984

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.86  E-value=3.9e-22  Score=182.21  Aligned_cols=140  Identities=12%  Similarity=0.164  Sum_probs=115.1

Q ss_pred             CHHHHHHHhCCCCCc-ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCC-CCCcce
Q 021173          166 PLDEVAAACHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQ-HPNLCK  240 (316)
Q Consensus       166 ~~~ei~~~t~~f~~~-~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~-HpnIv~  240 (316)
                      .+.......+.|... +.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.++..+. |+||++
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~   93 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQ-----EYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN   93 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCC
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCC-----EEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEE
Confidence            333444555567665 889999999999999987654     377777653   2334567999999999995 799999


Q ss_pred             eeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++.+.  +..+|||||+.+|+|.+++.... ...+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus        94 ~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl  163 (327)
T 3lm5_A           94 LHEVYENT--SEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNIL  163 (327)
T ss_dssp             EEEEEECS--SEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             EEEEEEeC--CeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEE
Confidence            99999874  88999999999999999987643 34699999999999999999999995   6999999999984

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.86  E-value=7.8e-22  Score=178.32  Aligned_cols=132  Identities=21%  Similarity=0.255  Sum_probs=110.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+..    .......+.+|+.+++.++|+||+++++++...  
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--  104 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGV-----PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED--  104 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCC-----EEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCc-----eEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC--
Confidence            457888999999999999999876554     378887763    334567799999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++.... ....+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl  168 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVF  168 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEE
Confidence            88999999999999999987521 133589999999999999999999995   6999999999984

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.86  E-value=3.4e-22  Score=199.79  Aligned_cols=131  Identities=18%  Similarity=0.113  Sum_probs=113.2

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEc
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASL-QHPNLCKLLGFHAR  247 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~  247 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+|+|.+..    .....+.+..|..+|..+ +|+||+.+++++.+
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~-----~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDE-----LYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCC-----EEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCc-----EEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEe
Confidence            45678899999999999999999987765     378888763    223456688999999988 69999999999887


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +.+||||||+++|+|.++|....   .+++..++.|+.||+.||+|||+.   +||||||||+||+
T Consensus       414 ~--~~~~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NIL  474 (674)
T 3pfq_A          414 M--DRLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVM  474 (674)
T ss_dssp             S--SEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEE
T ss_pred             C--CEEEEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEE
Confidence            4  88999999999999999998754   499999999999999999999995   7999999999984

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.86  E-value=1.1e-22  Score=180.98  Aligned_cols=130  Identities=15%  Similarity=0.259  Sum_probs=108.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||++.+.+.       .+++|.+... ...+.|.+|+.+++.++|+||+++++++.++ .+..
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~-------~vavK~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   90 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYRGN-------KVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGL   90 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTE-------EEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CC
T ss_pred             hhhceEEeEEecCCCceEEEEEEcCC-------EEEEEEecch-hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-CCce
Confidence            45688889999999999999998643       3888888743 3456799999999999999999999998664 3578


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+++|+|.+++.... ...+++..++.++.|++.||.|||++   +|+||||||+||.
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil  149 (278)
T 1byg_A           91 YIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVL  149 (278)
T ss_dssp             EEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEE
Confidence            99999999999999998643 12388999999999999999999995   6999999999984

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.86  E-value=5.7e-22  Score=179.39  Aligned_cols=131  Identities=16%  Similarity=0.214  Sum_probs=107.7

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+++|.+... ...+.+.+|+.++..++|+||+++++++...  +.
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~   98 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQ-----IVAIKQVPVE-SDLQEIIKEISIMQQCDSPHVVKYYGSYFKN--TD   98 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCC-----EEEEEEEETT-SCCHHHHHHHHHHHTCCCTTBCCEEEEEEET--TE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCC-----EEEEEecCch-HHHHHHHHHHHHHHhCCCCCCccEEEEEEeC--CE
Confidence            34568888999999999999999987654     3788877643 3456789999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+.+|+|.+++....  ..+++..++.++.||+.||.|||+.   +|+|+||||+||.
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil  157 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNIL  157 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEE
Confidence            999999999999999997432  2599999999999999999999995   6999999999984

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.86  E-value=2.7e-22  Score=180.17  Aligned_cols=134  Identities=18%  Similarity=0.254  Sum_probs=98.8

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .|++|.+...  ....+.+.+|+.++..++|+||+++++++...  
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--   85 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKE-----KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK--   85 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----C-----EEEEECCC----------------CCCCCCCTTBCCEEEEEESS--
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCc-----EEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec--
Confidence            35678889999999999999999865544     3888887632  34456789999999999999999999999885  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGR-----SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~-----~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+++|+|.+++...     .....+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil  153 (303)
T 2vwi_A           86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNIL  153 (303)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEE
T ss_pred             CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEE
Confidence            7899999999999999998741     1123589999999999999999999995   6999999999984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=5.2e-22  Score=182.73  Aligned_cols=133  Identities=16%  Similarity=0.235  Sum_probs=106.1

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc------hhhHhHHHHHHHHHhCCCCCcceeeeE
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS------QGVKEFINDVNTLASLQHPNLCKLLGF  244 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~g~  244 (316)
                      ....++|...+.||+|+||.||+|.+..++.     .+++|.+....      ...+.+.+|+.+++.++|+||++++++
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQ-----IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA   80 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCS-----EEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCc-----EEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEE
Confidence            3345779999999999999999999976654     37888876321      123468899999999999999999999


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+.  +..+|||||+.+ +|.+++....  ..+++..+..++.|++.||.|||+.   +|+||||||+||+
T Consensus        81 ~~~~--~~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  144 (346)
T 1ua2_A           81 FGHK--SNISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLL  144 (346)
T ss_dssp             ECCT--TCCEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             EeeC--CceEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEE
Confidence            9874  789999999986 8999887653  3588999999999999999999995   6999999999984

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.86  E-value=1.2e-21  Score=175.89  Aligned_cols=130  Identities=22%  Similarity=0.282  Sum_probs=109.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .+++|.+...   ......+.+|+.++++++|+||+++++++..+  +
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~   75 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE--N   75 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET--T
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCc-----eEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC--C
Confidence            568888999999999999999986654     3788887632   22346788999999999999999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+|||||+. |+|.+++.... ...+++..+..++.|++.||.|||+.   +|+||||||+||.
T Consensus        76 ~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil  135 (299)
T 2r3i_A           76 KLYLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL  135 (299)
T ss_dssp             EEEEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             ceEEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeE
Confidence            8999999997 59999998754 23589999999999999999999995   6999999999984

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.86  E-value=7.8e-22  Score=176.50  Aligned_cols=131  Identities=16%  Similarity=0.204  Sum_probs=113.0

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+++|.+..   .......+.+|+.++++++|+||+++++++.+. 
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~-----~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-   93 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQ-----EYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS-   93 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCc-----EEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-
Confidence            34678899999999999999999976554     377777642   233456799999999999999999999999874 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..++||||+.+++|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus        94 -~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl  153 (287)
T 2wei_A           94 -SSFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENIL  153 (287)
T ss_dssp             -SEEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             -CeEEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEE
Confidence             88999999999999999887643   499999999999999999999995   6999999999984

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.86  E-value=8e-22  Score=178.31  Aligned_cols=130  Identities=13%  Similarity=0.212  Sum_probs=105.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC----
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD----  248 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~----  248 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+.. .....+.+.+|+.+++.++|+||+++++++...    
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDK-----RVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQL   84 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTE-----EEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBC
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCe-----EEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccc
Confidence            3568888999999999999999987664     378887753 345567899999999999999999999987432    


Q ss_pred             --------CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 --------GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 --------~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                              ..+..++||||+. |+|.+++...    .+++..+..++.|++.||.|||++   +|+||||||+||.
T Consensus        85 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  152 (320)
T 2i6l_A           85 TDDVGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLF  152 (320)
T ss_dssp             CC----CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEE
T ss_pred             ccccccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEE
Confidence                    1367899999998 6999999753    489999999999999999999995   6999999999984

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.86  E-value=2e-21  Score=177.80  Aligned_cols=130  Identities=18%  Similarity=0.289  Sum_probs=110.3

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHh--CCCCCcceeeeEEEcC
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS--LQHPNLCKLLGFHARD  248 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~g~~~~~  248 (316)
                      ....++|...+.||+|+||.||+|.+.+.       .|++|.+..  .....+.+|++++..  ++|+||+++++++...
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~-------~vavK~~~~--~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKWRGE-------EVAVKIFSS--REERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEETTE-------EEEEEEECG--GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEEcCc-------cEEEEEeCc--hhHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            34456799999999999999999998532       388888863  334668889999988  6899999999999875


Q ss_pred             CC--CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEEeccCCCCCC
Q 021173          249 GS--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH--------EEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~--~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH--------~~~~~~IiHrDlKp~NI~  316 (316)
                      ..  ...++||||+++|+|.+++...    .+++..++.++.|++.||.|||        +   .+|+||||||+||+
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIl  179 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNIL  179 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEE
T ss_pred             CCccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEE
Confidence            22  2789999999999999999865    3999999999999999999999        5   47999999999984

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.86  E-value=6.4e-22  Score=183.38  Aligned_cols=132  Identities=11%  Similarity=0.163  Sum_probs=112.3

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .|++|.+..  .....+.+.+|+.+|.+++|+||+++++++....
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   98 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKV-----RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT   98 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCe-----EEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC
Confidence            345678889999999999999999887664     388888863  3344577999999999999999999999987531


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ....++||||+. |+|.+++...    .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        99 ~~~~~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl  160 (364)
T 3qyz_A           99 IEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLL  160 (364)
T ss_dssp             TTTCCCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             ccccceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEE
Confidence               246899999997 5999999765    399999999999999999999995   6999999999984

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.86  E-value=1.5e-21  Score=185.13  Aligned_cols=131  Identities=15%  Similarity=0.088  Sum_probs=113.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC------CCCCcceeeeEEEc
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL------QHPNLCKLLGFHAR  247 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~g~~~~  247 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+.........+.+|+.++..+      .|+||+.+++++..
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~-----~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~  170 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQ-----HVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF  170 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTE-----EEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCc-----EEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence            3568888999999999999999987765     389999987666667888999988887      57799999999988


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +.++|||||+. |+|.+++.... ...+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus       171 ~--~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIL  232 (429)
T 3kvw_A          171 R--NHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENIL  232 (429)
T ss_dssp             T--TEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEE
T ss_pred             C--CeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence            4  88999999996 69999998754 33599999999999999999999995   6999999999984

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.86  E-value=2.3e-22  Score=182.27  Aligned_cols=131  Identities=14%  Similarity=0.197  Sum_probs=111.9

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ....++|...+.||+|+||.||+|.+.+.        +++|.+..   .....+.|.+|+.++++++|+||+++++++.+
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~--------~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  100 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHGE--------VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS  100 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESSS--------EEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcCe--------EEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence            33456788889999999999999998753        66676653   23345678899999999999999999999987


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +..++||||+++++|.+++....  ..+++..++.|+.||+.||.|||++   +|+||||||+||.
T Consensus       101 ~--~~~~iv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl  162 (319)
T 2y4i_B          101 P--PHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVF  162 (319)
T ss_dssp             S--SCEEEECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEE
T ss_pred             C--CceEEEeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEE
Confidence            4  78999999999999999998653  3589999999999999999999995   6999999999984

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.86  E-value=1.3e-21  Score=178.23  Aligned_cols=131  Identities=12%  Similarity=0.134  Sum_probs=112.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEEC-CCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC------cceeeeEEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFG-DDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN------LCKLLGFHA  246 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~-~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~g~~~  246 (316)
                      .++|...+.||+|+||.||+|.+. .++.     .|++|.+.......+.+.+|+.++..++|+|      |+++++++.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~   87 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGR-----HVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE   87 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTE-----EEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCc-----EEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence            357888899999999999999984 3433     3899988866666778999999999987654      999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..  +..+|||||+ +++|.+++.... ...+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        88 ~~--~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  150 (339)
T 1z57_A           88 HH--GHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENIL  150 (339)
T ss_dssp             ET--TEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             cC--CcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEE
Confidence            74  8999999999 889999998764 33589999999999999999999995   6999999999984

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.86  E-value=6e-22  Score=177.05  Aligned_cols=132  Identities=20%  Similarity=0.273  Sum_probs=104.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+......  ...+++|.+..    .....+.|.+|+.+++.++|+||+++++++..   
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---   92 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGK--TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---   92 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSC--EEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCc--eeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc---
Confidence            5688889999999999999987432211  12378887763    23456789999999999999999999999987   


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..++||||+.+|+|.+++....  ..+++..+..++.|++.||.|||++   +|+||||||+||.
T Consensus        93 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil  153 (291)
T 1u46_A           93 PPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL  153 (291)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             CCceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEE
Confidence            45899999999999999998642  2489999999999999999999995   6999999999984

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.85  E-value=1.4e-21  Score=194.84  Aligned_cols=134  Identities=16%  Similarity=0.266  Sum_probs=112.7

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..++|...+.||+|+||.||+|.+..+....  ..+++|.+..  .....+.|.+|+.+|++++||||+++++++.+   
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~--~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---  462 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPA--MAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---  462 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCC--EEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCcc--EEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence            3466888899999999999999986543211  2378887763  33445779999999999999999999999854   


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+++|+|.+++....  ..+++..++.|+.|++.||.|||++   +|+||||||+||+
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NIL  523 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVL  523 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             CceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEE
Confidence            66899999999999999998653  2589999999999999999999995   6999999999984

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.85  E-value=1.1e-21  Score=183.14  Aligned_cols=134  Identities=11%  Similarity=0.149  Sum_probs=105.7

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      ....++|...+.||+|+||.||+|.+..++.     .||+|.+....   ..+.+|+.+|+.++|+||+++++++...+ 
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~-----~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   74 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGK-----RFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGD   74 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCC-----EEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCC-----EEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCc
Confidence            4456789999999999999999999977665     38888775332   23457999999999999999999985421 


Q ss_pred             -----------------------------------CCeEEEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHH
Q 021173          250 -----------------------------------SDQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQG  293 (316)
Q Consensus       250 -----------------------------------~~~~~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~g  293 (316)
                                                         ...++|||||++ |+|.+.+... ..+..+++..+..|+.||+.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a  153 (383)
T 3eb0_A           75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA  153 (383)
T ss_dssp             -----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                                               234889999998 5887777641 113369999999999999999


Q ss_pred             HHHHHhcCCCCcEEeccCCCCCC
Q 021173          294 LTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       294 L~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |.|||+.   +|+||||||+||+
T Consensus       154 L~~LH~~---gi~H~Dikp~Nil  173 (383)
T 3eb0_A          154 VGFIHSL---GICHRDIKPQNLL  173 (383)
T ss_dssp             HHHHHTT---TEECSCCCGGGEE
T ss_pred             HHHHHHC---cCccCccCHHHEE
Confidence            9999995   6999999999984

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.85  E-value=1.4e-21  Score=179.92  Aligned_cols=132  Identities=11%  Similarity=0.189  Sum_probs=109.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+...   ......+.+|+.+|+.++|+||+++++++.... 
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQ-----KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCC-----EEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCC-----EEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccc
Confidence            3568888999999999999999976654     3888877532   233456889999999999999999999998642 


Q ss_pred             -----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                           .+.++|||||+.+ +|.+.+....  ..+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        91 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl  156 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVL  156 (351)
T ss_dssp             ------CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             ccccCCceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEE
Confidence                 2568999999985 8888887653  2599999999999999999999995   6999999999984

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.85  E-value=7.8e-22  Score=179.67  Aligned_cols=136  Identities=18%  Similarity=0.243  Sum_probs=111.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC-CCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEc----
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN-PSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHAR----  247 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~----  247 (316)
                      ..+|...+.||+|+||.||+|.+..++.     .|++|.+. ......+.+.+|+.++.++. |+||+++++++..    
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGR-----EYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCC-----EEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCc-----EEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            4568888999999999999999976654     37888764 34455677999999999996 9999999999852    


Q ss_pred             --CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 --DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 --~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        .....+++||||+. |+|.+++........+++..++.|+.||+.||.|||+.+ .+|+||||||+||+
T Consensus       102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl  170 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLL  170 (337)
T ss_dssp             STTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCE
T ss_pred             cccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEE
Confidence              22356899999996 699998876322335999999999999999999999963 13999999999994

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=3.2e-22  Score=183.60  Aligned_cols=130  Identities=12%  Similarity=0.138  Sum_probs=109.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch------------------hhHhHHHHHHHHHhCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ------------------GVKEFINDVNTLASLQH  235 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~E~~~l~~l~H  235 (316)
                      .++|...+.||+|+||.||+|.+ ++.      .|++|.+.....                  ..+.|.+|+.+++.++|
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~------~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  102 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNK------FYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN  102 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTE------EEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCc------eEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence            46788889999999999999999 333      377887652111                  11789999999999999


Q ss_pred             CCcceeeeEEEcCCCCeEEEEEecCCCCCHHHH------HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEEe
Q 021173          236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRL------IYGRSDGPPIDWNTRVKIALCAAQGLTFLHE-EGPFQVIFY  308 (316)
Q Consensus       236 pnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~------L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~-~~~~~IiHr  308 (316)
                      +||+++++++.+.  +..++||||+++|+|.++      +.... ...+++..++.++.|++.||.|||+ .   +|+||
T Consensus       103 ~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~  176 (348)
T 2pml_X          103 EYCLTCEGIITNY--DEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHR  176 (348)
T ss_dssp             TTBCCCSEEEESS--SEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECC
T ss_pred             CCcceEEEEEeeC--CeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeec
Confidence            9999999999884  889999999999999998      55422 3469999999999999999999998 5   69999


Q ss_pred             ccCCCCCC
Q 021173          309 YFEMIKTE  316 (316)
Q Consensus       309 DlKp~NI~  316 (316)
                      ||||+||.
T Consensus       177 dl~p~Nil  184 (348)
T 2pml_X          177 DVKPSNIL  184 (348)
T ss_dssp             CCCGGGEE
T ss_pred             CCChHhEE
Confidence            99999984

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.85  E-value=7.4e-22  Score=197.63  Aligned_cols=130  Identities=15%  Similarity=0.197  Sum_probs=107.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECC-CCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGD-DASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+.. ++.     .|++|.+..  .......|.+|+.+|.+++||||+++++++...+.
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  153 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGR-----PVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR  153 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTE-----EEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCc-----EEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC
Confidence            3678889999999999999999864 332     388888753  33445678999999999999999999999987421


Q ss_pred             ---CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 ---DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ---~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ...||||||+++++|.+++..     .+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       154 ~~~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIl  214 (681)
T 2pzi_A          154 HGDPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIM  214 (681)
T ss_dssp             TSCEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCCceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeE
Confidence               116999999999999987754     499999999999999999999995   6999999999984

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.85  E-value=2.6e-21  Score=177.91  Aligned_cols=130  Identities=15%  Similarity=0.217  Sum_probs=111.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC--
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+..  .......+.+|+.+++.++|+||+++++++....  
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   84 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGE-----IVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE   84 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCc-----EEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC
Confidence            4678888999999999999999987664     388888863  2334567889999999999999999999886531  


Q ss_pred             -CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ....++||||+. |+|.+++...    .+++..+..++.|++.||.|||++   +|+||||||+||+
T Consensus        85 ~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil  144 (353)
T 2b9h_A           85 NFNEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLL  144 (353)
T ss_dssp             TCCCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             ccceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeE
Confidence             367899999997 5999999864    499999999999999999999995   6999999999984

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.85  E-value=2.2e-21  Score=173.62  Aligned_cols=131  Identities=13%  Similarity=0.069  Sum_probs=106.6

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ..++|...+.||+|+||.||+|.+..++.     .+++|.+... .....+.+|+.++..++|++++..++++..+ .+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~-~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~   79 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGE-----EVAIKLECVK-TKHPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDY   79 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTE-----EEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEE-TTE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCc-----eEEEEeeccc-ccchHHHHHHHHHHHhcCCCCCCeeeeecCC-CCc
Confidence            45779999999999999999999876664     3778865422 2335688999999999999888887777554 478


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+ +|+|.+++....  ..+++..++.++.||+.||.|||++   +|+||||||+||+
T Consensus        80 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl  137 (296)
T 4hgt_A           80 NVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFL  137 (296)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             eEEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHee
Confidence            89999999 999999998543  2599999999999999999999995   6999999999984

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.85  E-value=1.4e-21  Score=180.18  Aligned_cols=142  Identities=12%  Similarity=0.070  Sum_probs=101.8

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ++.....++|...+.||+|+||.||+|.+..++.     .|++|.+.........+.+|+..+..++|+||+++++++..
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~   90 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGM-----SVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYT   90 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCC-----EEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence            4456677899999999999999999999986654     37888776555555667888999999999999999999876


Q ss_pred             CC-----CCeEEEEEecCCCCCHHHHHhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DG-----SDQRMLIYERLFHGSLDRLIYG-RSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~-----~~~~~lV~Ey~~~GsL~~~L~~-~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+     ...++|||||+.+ +|.+.+.. ......+++..+..++.|++.||.|||.+. .+|+||||||+||+
T Consensus        91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~-~~ivH~Dlkp~NIl  163 (360)
T 3e3p_A           91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS-VNVCHRDIKPHNVL  163 (360)
T ss_dssp             ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT-TCCBCSCCCGGGEE
T ss_pred             cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC-CCeecCcCCHHHEE
Confidence            31     1237899999986 55544432 111336899999999999999999999221 47999999999984

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.85  E-value=2.8e-21  Score=181.67  Aligned_cols=131  Identities=15%  Similarity=0.177  Sum_probs=99.8

Q ss_pred             CCCC-cceeeecCceEEEEEEECCC--CceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          176 NFFS-DRCISEGLSSVMYRASFGDD--ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       176 ~f~~-~~~IG~G~fg~Vy~~~~~~~--~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .|.. +++||+|+||.||+|.+.++  +.     .+|+|.+... .....+.+|+.+|+.++|+||+++++++.......
T Consensus        21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~-----~vaiK~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   94 (405)
T 3rgf_A           21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDK-----DYALKQIEGT-GISMSACREIALLRELKHPNVISLQKVFLSHADRK   94 (405)
T ss_dssp             HEECSSCCCC-----EEEEEEESSSSCCC-----CEEEEECSSS-SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred             hhhhcCcEeeecCCeEEEEEEEccCCCCe-----EEEEEEECCC-CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence            3444 46899999999999997632  22     3888988743 23356889999999999999999999997654588


Q ss_pred             EEEEEecCCCCCHHHHHhcCC------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||||+.+ +|.+++....      ....+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIl  160 (405)
T 3rgf_A           95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANIL  160 (405)
T ss_dssp             EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeE
Confidence            9999999975 8888876321      122489999999999999999999995   6999999999984

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.85  E-value=7.2e-22  Score=182.12  Aligned_cols=132  Identities=14%  Similarity=0.174  Sum_probs=107.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCcee---EEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcce-----------
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTS---KKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK-----------  240 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~-----------  240 (316)
                      ++|...+.||+|+||.||+|.+..+....   ....+++|.+...    ..+.+|+.++++++|+||++           
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  117 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL  117 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence            56888899999999999999987631100   0123888887633    46889999999999999988           


Q ss_pred             ----eeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 ----LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 ----l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          +++++..+ .+..+|||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       118 ~i~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl  191 (352)
T 2jii_A          118 AIPTCMGFGVHQ-DKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF  191 (352)
T ss_dssp             SCCCCCEEEEET-TTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred             CccchhhccccC-CcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence                56777653 37899999999 999999998752 23599999999999999999999995   6999999999984

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.85  E-value=3.3e-21  Score=172.68  Aligned_cols=130  Identities=13%  Similarity=0.073  Sum_probs=109.3

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+.... ....+.+|+.++..++|++++..++++..+ .+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-~~~~   80 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGE-----EVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDYN   80 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTE-----EEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEE-TTEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCc-----EEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCC-CCce
Confidence            4678889999999999999999876654     37888765322 335689999999999999888877777554 4788


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||+ +|+|.+++....  ..+++..++.++.||+.||.|||++   +|+||||||+||.
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl  137 (296)
T 3uzp_A           81 VMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFL  137 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             EEEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeE
Confidence            9999999 899999998543  2599999999999999999999995   6999999999984

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.85  E-value=3.5e-21  Score=179.00  Aligned_cols=129  Identities=13%  Similarity=0.151  Sum_probs=109.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+..   .....+.+.+|+.+++.++|+||+++++++...+ 
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   98 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILER-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS   98 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCS
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCc-----eEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccc
Confidence            4678888999999999999999887664     378887753   2344567899999999999999999999997642 


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ....+|||||+.+ +|.+++..     .+++..+..++.||+.||.|||++   +|+||||||+||+
T Consensus        99 ~~~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl  159 (371)
T 2xrw_A           99 LEEFQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  159 (371)
T ss_dssp             TTTCCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             cccccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEE
Confidence               1378999999975 79888863     389999999999999999999995   6999999999984

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.85  E-value=2.7e-22  Score=186.91  Aligned_cols=134  Identities=13%  Similarity=0.201  Sum_probs=102.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecC----CCchhhHhHHHHH---HHHHhCCCCCcceee----
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN----PSSQGVKEFINDV---NTLASLQHPNLCKLL----  242 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~----~~~~~~~~~~~E~---~~l~~l~HpnIv~l~----  242 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+.    ......+.|.+|+   .+|+.++|||||+++    
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~  146 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGE-----SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI  146 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCC-----EEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCc-----EEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhh
Confidence            3567778999999999999999865544     37888774    2334567799999   555566899999998    


Q ss_pred             ---eEEEcCCC----------C-----eEEEEEecCCCCCHHHHHhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhc
Q 021173          243 ---GFHARDGS----------D-----QRMLIYERLFHGSLDRLIYGRSD----GPPIDWNTRVKIALCAAQGLTFLHEE  300 (316)
Q Consensus       243 ---g~~~~~~~----------~-----~~~lV~Ey~~~GsL~~~L~~~~~----~~~l~~~~~~~ia~qia~gL~yLH~~  300 (316)
                         +++.+.+.          +     ..||||||+ +|+|.+++.....    ...+++..++.|+.||+.||.|||++
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  225 (377)
T 3byv_A          147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY  225 (377)
T ss_dssp             CCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence               55554310          0     378999999 6899999986421    11244688889999999999999995


Q ss_pred             CCCCcEEeccCCCCCC
Q 021173          301 GPFQVIFYYFEMIKTE  316 (316)
Q Consensus       301 ~~~~IiHrDlKp~NI~  316 (316)
                         +|+||||||+||+
T Consensus       226 ---~ivHrDikp~NIl  238 (377)
T 3byv_A          226 ---GLVHTYLRPVDIV  238 (377)
T ss_dssp             ---TEECSCCCGGGEE
T ss_pred             ---CeecCCCCHHHEE
Confidence               6999999999984

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.85  E-value=3.7e-21  Score=176.47  Aligned_cols=132  Identities=13%  Similarity=0.137  Sum_probs=105.0

Q ss_pred             HhCCCCCc-ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--C
Q 021173          173 ACHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--G  249 (316)
Q Consensus       173 ~t~~f~~~-~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~  249 (316)
                      ..++|... ++||+|+||.||+|.+..++.     .||+|.+........+   ....+..+.|+||+++++++...  +
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~e---~~~~~~~~~h~~i~~~~~~~~~~~~~   97 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQ-----KCALKLLYDSPKARQE---VDHHWQASGGPHIVCILDVYENMHHG   97 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEESSHHHHHH---HHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCC-----EEEEEEecCcHHHHHH---HHHHHHhcCCCChHHHHHHHhhccCC
Confidence            34567774 579999999999999986654     3888888644332222   22346677899999999998752  1


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...++|||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus        98 ~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIl  160 (336)
T 3fhr_A           98 KRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLL  160 (336)
T ss_dssp             EEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEE
Confidence            255899999999999999998764 34699999999999999999999995   6999999999984

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.85  E-value=2.5e-21  Score=172.96  Aligned_cols=133  Identities=18%  Similarity=0.177  Sum_probs=105.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhH-hHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVK-EFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~-~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .+++|.+...  ..... .+..+...++.++|+||+++++++.++  
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~--   78 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQ-----IMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE--   78 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCe-----EEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc--
Confidence            4578888999999999999999976664     3888888642  22223 344455568888999999999999874  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||++ |+|.+++... .....+++..++.|+.|++.||.|||++  .+|+||||||+||.
T Consensus        79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil  142 (290)
T 3fme_A           79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVL  142 (290)
T ss_dssp             SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCE
T ss_pred             CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEE
Confidence            78999999997 4888877641 1133699999999999999999999995  16999999999984

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.85  E-value=9e-22  Score=178.06  Aligned_cols=132  Identities=14%  Similarity=0.126  Sum_probs=105.2

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhC----CCCCcce
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASL----QHPNLCK  240 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l----~HpnIv~  240 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .+++|.+....       .....+.+|+.++.++    +|+||++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~  102 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRL-----QVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIR  102 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCC-----EEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCe-----EEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence            345679999999999999999999876654     38888886322       2345577899999999    8999999


Q ss_pred             eeeEEEcCCCCeEEEEEec-CCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          241 LLGFHARDGSDQRMLIYER-LFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       241 l~g~~~~~~~~~~~lV~Ey-~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++...  +..++|||| +.+++|.+++....   .+++..++.++.||+.||.|||+.   +|+||||||+||.
T Consensus       103 ~~~~~~~~--~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil  171 (312)
T 2iwi_A          103 LLDWFETQ--EGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENIL  171 (312)
T ss_dssp             EEEEC-------CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEE
T ss_pred             EEEEEecC--CeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEE
Confidence            99999874  788999999 78999999998754   499999999999999999999995   6999999999984

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.84  E-value=7.7e-22  Score=178.71  Aligned_cols=138  Identities=14%  Similarity=0.158  Sum_probs=114.3

Q ss_pred             ccCHHHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCC--CCCc
Q 021173          164 NFPLDEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQ--HPNL  238 (316)
Q Consensus       164 ~~~~~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~--HpnI  238 (316)
                      .+.++.+....++|...+.||+|+||.||++.+.++..      +++|.+..   .....+.+.+|+.++.+++  |+||
T Consensus        17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~------vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i   90 (313)
T 3cek_A           17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQI------YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI   90 (313)
T ss_dssp             ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCE------EEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTB
T ss_pred             CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcE------EEEEEeccccccccchHHHHHHHHHHHhccccCCce
Confidence            34444455556779999999999999999999876543      77787742   3445678999999999997  5999


Q ss_pred             ceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       239 v~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++++++...  +..+|||| +.+|+|.+++....   .+++..++.|+.|++.||.|||+.   +|+||||||+||.
T Consensus        91 v~~~~~~~~~--~~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl  159 (313)
T 3cek_A           91 IRLYDYEITD--QYIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFL  159 (313)
T ss_dssp             CCEEEEEECS--SEEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             EEEEEEeecC--CEEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEE
Confidence            9999999884  78999999 66889999998754   589999999999999999999995   6999999999984

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.84  E-value=8.8e-22  Score=181.14  Aligned_cols=133  Identities=14%  Similarity=0.161  Sum_probs=101.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch------------hhHhHHHHHHHHHhCCCCCcceee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ------------GVKEFINDVNTLASLQHPNLCKLL  242 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~HpnIv~l~  242 (316)
                      ++|...+.||+|+||.||+|.+..+....  ..+++|.+.....            ....+.+|+.++..++|+||++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~--~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~  114 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKD--ARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY  114 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGG--CCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCcc--ceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence            56888899999999999999997521110  1266776653221            123477889999999999999999


Q ss_pred             eEEEcC--CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          243 GFHARD--GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       243 g~~~~~--~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++..+  +....+|||||+ +++|.+++....   .+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl  183 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLL  183 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             cccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEE
Confidence            998872  237899999999 999999998754   599999999999999999999995   7999999999984

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.84  E-value=1.6e-21  Score=184.41  Aligned_cols=129  Identities=12%  Similarity=0.139  Sum_probs=102.8

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC----CC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----SD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~~  251 (316)
                      .|...+.||+|+||.||+|.+..++.     .||+|.+....   ..+.+|+++|+.++|+|||+++++|...+    ..
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~-----~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~  126 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV  126 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCc-----EEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence            47778999999999999999987654     37888775332   23457999999999999999999986421    13


Q ss_pred             eEEEEEecCCCCCHHHHHhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGR-SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~-~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||||+.+ +|.+++... .....+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIL  188 (420)
T 1j1b_A          127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLL  188 (420)
T ss_dssp             EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEE
T ss_pred             eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEE
Confidence            46799999986 676665531 1133699999999999999999999995   7999999999984

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.84  E-value=2.7e-21  Score=178.94  Aligned_cols=133  Identities=15%  Similarity=0.139  Sum_probs=113.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-----------CCCcceeee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-----------HPNLCKLLG  243 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------HpnIv~l~g  243 (316)
                      ++|...+.||+|+||.||+|.+..++.     .|++|.+.........+.+|+.++.++.           |+||+++++
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNT-----HVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCc-----EEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            568888999999999999999876664     3899998876666778999999999886           889999999


Q ss_pred             EEEcCC--CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDG--SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~--~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++...+  ...++|||||+ +++|.+++.... ...+++..++.|+.||+.||.|||++  .+|+||||||+||+
T Consensus        94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIl  164 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVL  164 (373)
T ss_dssp             EEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEE
T ss_pred             HhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeE
Confidence            988632  23789999999 889999998754 23599999999999999999999994  16999999999984

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.84  E-value=5.7e-21  Score=175.17  Aligned_cols=132  Identities=11%  Similarity=0.069  Sum_probs=111.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC------cceeeeEEEc
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN------LCKLLGFHAR  247 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~g~~~~  247 (316)
                      .++|...+.||+|+||.||+|.+..++.    ..|++|.+.......+.+.+|+.+++.++|++      ++.+++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~   93 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGK----SQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF   93 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTT----EEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCc----eEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence            4678888999999999999999876542    13889988866666778999999999997665      8899998887


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  +..+|||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus        94 ~--~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIl  155 (355)
T 2eu9_A           94 H--GHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENIL  155 (355)
T ss_dssp             T--TEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             C--CeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEE
Confidence            4  8899999999 667877777653 23599999999999999999999995   7999999999984

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.84  E-value=5.5e-21  Score=183.88  Aligned_cols=129  Identities=16%  Similarity=0.120  Sum_probs=105.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcce-eeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK-LLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~-l~g~~~~~~~~~  252 (316)
                      .++|...++||+|+||.||+|.+..++.     .|+||.+... ....++.+|+.++..|+|.+++. +..++..  .+.
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~-----~vAvK~~~~~-~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~--~~~   77 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNE-----EVAIKLENVK-TKHPQLLYESKIYRILQGGTGIPNVRWFGVE--GDY   77 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCC-----EEEEEEEETT-CSSCCHHHHHHHHHHTTTSTTCCCEEEEEEE--TTE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCc-----EEEEEEeccc-cccHHHHHHHHHHHHhcCCCCCCeEEEEEee--CCE
Confidence            4678899999999999999999876654     3788876532 23356899999999998755544 4444444  488


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||+ +++|.+++....  ..+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        78 ~~lvme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NIL  135 (483)
T 3sv0_A           78 NVLVMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFL  135 (483)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEE
Confidence            89999999 999999998643  2599999999999999999999995   6999999999984

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.84  E-value=1.7e-21  Score=181.07  Aligned_cols=130  Identities=13%  Similarity=0.159  Sum_probs=103.1

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+..   .....+.+.+|+.+|+.++|+||+++++++.... 
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  102 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGL-----RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS  102 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTE-----EEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCC-----EEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCc
Confidence            4678888999999999999999887764     388998863   2344567899999999999999999999986531 


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ....+|||||+ +++|.+++...    .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus       103 ~~~~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIl  164 (367)
T 2fst_X          103 LEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLA  164 (367)
T ss_dssp             GGGCCCCEEEEECC-CEECC-----C----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             cccCCeEEEEeccc-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEE
Confidence               25689999999 68999988753    499999999999999999999995   6999999999984

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.84  E-value=1.8e-21  Score=182.50  Aligned_cols=130  Identities=11%  Similarity=0.099  Sum_probs=100.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC----C
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG----S  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~----~  250 (316)
                      .+|...+.||+|+||.||+|.+..++.      +++|++....   ....+|+.+|+.++|+||++++++|...+    .
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~------~aikk~~~~~---~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~  110 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE------VAIKKVLQDK---RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE  110 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE------EEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe------EEEEEEecCc---chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence            457888999999999999999987764      5566554222   22347999999999999999999987532    1


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++|||||+.++.+..+.........+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nil  173 (394)
T 4e7w_A          111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLL  173 (394)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEE
Confidence            23789999998754433332111133599999999999999999999995   6999999999984

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.84  E-value=7.1e-21  Score=177.53  Aligned_cols=135  Identities=15%  Similarity=0.100  Sum_probs=114.3

Q ss_pred             HHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CC-----CcceeeeEE
Q 021173          172 AACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HP-----NLCKLLGFH  245 (316)
Q Consensus       172 ~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-Hp-----nIv~l~g~~  245 (316)
                      ...++|...+.||+|+||.||+|.+..++.     .||+|.+........++.+|+.++..+. |+     +|+.+++++
T Consensus        51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQE-----WVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTE-----EEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             EeeeeEEEEEEEeecCCEEEEEEEEcCCCc-----EEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            345789899999999999999999987664     3899998866666778889999999885 55     499999999


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...  +..+|||||+. |+|.+++.... ...+++..+..|+.|++.||.|||.+. .+||||||||+||+
T Consensus       126 ~~~--~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIl  191 (382)
T 2vx3_A          126 MFR--NHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENIL  191 (382)
T ss_dssp             EET--TEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEE
T ss_pred             ccC--CceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEE
Confidence            884  89999999996 59999998754 235999999999999999999999632 47999999999984

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.84  E-value=5.5e-21  Score=177.66  Aligned_cols=129  Identities=15%  Similarity=0.154  Sum_probs=108.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+..   .....+.+.+|+.+++.++|+||+++++++...+.
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  115 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGE-----KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS  115 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCC-----EEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC
Confidence            4678888999999999999999987765     388888864   23345778999999999999999999999987421


Q ss_pred             ----CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 ----DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ----~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ...+|||||+. |+|.+++..     .+++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus       116 ~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl  176 (371)
T 4exu_A          116 LRNFYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLA  176 (371)
T ss_dssp             STTCCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             cccceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeE
Confidence                12499999997 589888743     389999999999999999999995   6999999999984

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.83  E-value=1e-20  Score=171.92  Aligned_cols=134  Identities=19%  Similarity=0.247  Sum_probs=107.4

Q ss_pred             HhCCCCCcceeeecCceEEEEEEEC-CCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhC---CCCCcceeeeEE
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFG-DDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL---QHPNLCKLLGFH  245 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~-~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l---~HpnIv~l~g~~  245 (316)
                      ..++|...+.||+|+||.||+|.+. .++.     .|++|.+..   .......+.+|+.+++.+   .|+||+++++++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~   83 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGR-----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVC   83 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTE-----EEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCE-----EEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeee
Confidence            4577889999999999999999985 4433     267776642   222234677888887776   899999999998


Q ss_pred             Ec---CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 AR---DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~---~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..   +.....+|||||+. |+|.+++.... ...+++..+..++.||+.||.|||+.   +|+||||||+||.
T Consensus        84 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nil  152 (326)
T 1blx_A           84 TVSRTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNIL  152 (326)
T ss_dssp             EEEECSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             eecccCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeE
Confidence            72   11367899999998 69999998754 23599999999999999999999995   6999999999984

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.83  E-value=2e-21  Score=192.45  Aligned_cols=134  Identities=13%  Similarity=0.155  Sum_probs=112.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc----C
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR----D  248 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----~  248 (316)
                      ++|...+.||+|+||.||+|.+..++.     .|++|.+..  .....+.|.+|+.++++++||||+++++++..    .
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~-----~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~   88 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGE-----QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLA   88 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTC-----CEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCc-----EEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccccc
Confidence            679999999999999999999876554     388998764  34456779999999999999999999998755    1


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+..+||||||++|+|.+++........+++..++.|+.|++.||.|||+.   +|+||||||+||.
T Consensus        89 ~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NIL  153 (676)
T 3qa8_A           89 PNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIV  153 (676)
T ss_dssp             TTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEE
T ss_pred             CCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeE
Confidence            1467899999999999999998765444699999999999999999999995   6999999999984

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.83  E-value=3.4e-21  Score=175.40  Aligned_cols=135  Identities=14%  Similarity=0.107  Sum_probs=112.2

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhCC--CCCcc
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASLQ--HPNLC  239 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~--HpnIv  239 (316)
                      +.....++|...+.||+|+||.||+|.+..++.     .|++|.+....       .....+.+|+.+++++.  |+||+
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~  111 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNL-----PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVI  111 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEEETTTTE-----EEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBC
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEEECCCCc-----EEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCce
Confidence            334456778899999999999999999877664     37888775321       12356889999999996  59999


Q ss_pred             eeeeEEEcCCCCeEEEEEecCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          240 KLLGFHARDGSDQRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       240 ~l~g~~~~~~~~~~~lV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++++++...  +..++||||+.+ ++|.+++....   .+++..++.|+.||+.||.|||+.   +|+||||||+||+
T Consensus       112 ~~~~~~~~~--~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl  181 (320)
T 3a99_A          112 RLLDWFERP--DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENIL  181 (320)
T ss_dssp             CEEEEEECS--SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEEEecC--CcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEE
Confidence            999999874  889999999986 89999998753   599999999999999999999995   6999999999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.83  E-value=8.1e-21  Score=175.05  Aligned_cols=129  Identities=15%  Similarity=0.152  Sum_probs=108.2

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+..   .....+.+.+|+.+++.++|+||+++++++...+.
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   97 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGE-----KVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS   97 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCC-----EEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc
Confidence            3678888999999999999999987664     388888763   23345678999999999999999999999986421


Q ss_pred             ----CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 ----DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ----~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                          ...++||||+. |+|.+++..     .+++..+..++.||+.||.|||++   +|+||||||+||.
T Consensus        98 ~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl  158 (353)
T 3coi_A           98 LRNFYDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLA  158 (353)
T ss_dssp             GGGCCCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEE
T ss_pred             cccceeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEe
Confidence                23599999997 588877643     389999999999999999999995   6999999999984

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.83  E-value=3.4e-21  Score=178.94  Aligned_cols=131  Identities=9%  Similarity=-0.015  Sum_probs=91.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhC--CCCCcceee------
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASL--QHPNLCKLL------  242 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l--~HpnIv~l~------  242 (316)
                      .+|...+.||+|+||.||+|.+..++.     .+|+|.+...    ....+.+.+|+.++..|  +||||++++      
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLE-----DFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCc-----eeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEee
Confidence            347777999999999999999987664     3888888742    23455677885544444  699988755      


Q ss_pred             -eEEEcCCC---------------CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHH------HHHHHHHHHHHHHHHhc
Q 021173          243 -GFHARDGS---------------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTR------VKIALCAAQGLTFLHEE  300 (316)
Q Consensus       243 -g~~~~~~~---------------~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~------~~ia~qia~gL~yLH~~  300 (316)
                       +++..++.               ..+|||||||+ |+|.+++.....  .+.+..+      +.++.||+.||.|||++
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~  213 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK  213 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC
Confidence             44433221               34899999999 899999987421  3555566      77889999999999995


Q ss_pred             CCCCcEEeccCCCCCC
Q 021173          301 GPFQVIFYYFEMIKTE  316 (316)
Q Consensus       301 ~~~~IiHrDlKp~NI~  316 (316)
                         +||||||||+||+
T Consensus       214 ---~ivHrDikp~NIl  226 (371)
T 3q60_A          214 ---GLVHGHFTPDNLF  226 (371)
T ss_dssp             ---TEEETTCSGGGEE
T ss_pred             ---CCccCcCCHHHEE
Confidence               6999999999984

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.82  E-value=3.5e-20  Score=168.80  Aligned_cols=133  Identities=16%  Similarity=0.179  Sum_probs=106.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHH-HHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVN-TLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~-~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+..  ......++..|+. +++.++|+||+++++++.++  
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~-----~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~--   93 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQ-----IMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE--   93 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTE-----EEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS--
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCC-----EEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC--
Confidence            3567788999999999999999986654     388888763  2334456667776 67778999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGR--SDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~--~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+.+ +|.+++...  .....+++..+..++.|++.||.|||+.  .+|+||||||+||.
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIl  158 (327)
T 3aln_A           94 GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNIL  158 (327)
T ss_dssp             SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEE
T ss_pred             CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEE
Confidence            889999999985 888777631  1123599999999999999999999995  16999999999984

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.81  E-value=1.7e-20  Score=178.11  Aligned_cols=126  Identities=13%  Similarity=0.156  Sum_probs=101.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .+|...++||+|+||+||.....++..      ||||.+...  ....+.+|+.+|+.+ +|||||++++++.+.  +..
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~------vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~--~~~   93 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRD------VAVKRILPE--CFSFADREVQLLRESDEHPNVIRYFCTEKDR--QFQ   93 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSE------EEEEEECTT--TEEECHHHHHHHHHSCCCTTBCCEEEEEEET--TEE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeE------EEEEEECHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecC--CEE
Confidence            457788999999999965444444432      889988642  234577999999999 799999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||. |+|.+++.....  .+.+..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus        94 ~lv~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIl  150 (432)
T 3p23_A           94 YIAIELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNIL  150 (432)
T ss_dssp             EEEEECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEE
T ss_pred             EEEEECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEE
Confidence            99999996 599999987542  355556778999999999999995   6999999999984

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.81  E-value=2.9e-20  Score=176.49  Aligned_cols=126  Identities=14%  Similarity=0.112  Sum_probs=97.6

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEE
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      |...+.||+|+||+||.+...++..      ||||.+..  ...+.+.+|+.+|..+ +|||||++++++.+.  +.++|
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~------vAvK~~~~--~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~--~~~~l   86 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRP------VAVKRMLI--DFCDIALMEIKLLTESDDHPNVIRYYCSETTD--RFLYI   86 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSE------EEEEEEEG--GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECS--SEEEE
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeE------EEEEEEcH--HHHHHHHHHHHHHHhccCCCCcCeEEEEEecC--CeEEE
Confidence            4456889999999998765555443      88887753  2345678999999886 899999999998874  88999


Q ss_pred             EEecCCCCCHHHHHhcCCCC-C---CCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          256 IYERLFHGSLDRLIYGRSDG-P---PIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~-~---~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||. |+|.+++...... .   ...+..++.|+.||+.||.|||+.   +||||||||+||+
T Consensus        87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NIL  147 (434)
T 2rio_A           87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNIL  147 (434)
T ss_dssp             EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEE
Confidence            999995 6999999875421 1   113334678999999999999995   6999999999984

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.80  E-value=4e-20  Score=181.26  Aligned_cols=87  Identities=16%  Similarity=0.109  Sum_probs=77.6

Q ss_pred             hhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 021173          219 GVKEFINDVNTLASL-QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL  297 (316)
Q Consensus       219 ~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yL  297 (316)
                      ..++|.+|+++|+++ .|+||+++++++.++  +..|||||||+||+|.++|....   .++..   .|+.||+.||+||
T Consensus       284 ~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~--~~~yLVMEyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~yl  355 (569)
T 4azs_A          284 NKYELHNEIKFLTQPPAGFDAPAVLAHGENA--QSGWLVMEKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAAL  355 (569)
T ss_dssp             HHHHHHHHHHHHHSCCTTCCCCCEEEEEECS--SEEEEEEECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC--CEEEEEEecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHH
Confidence            346799999999999 699999999999885  89999999999999999998754   47664   4889999999999


Q ss_pred             HhcCCCCcEEeccCCCCCC
Q 021173          298 HEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       298 H~~~~~~IiHrDlKp~NI~  316 (316)
                      |++   +||||||||+||+
T Consensus       356 H~~---GIIHRDIKPeNIL  371 (569)
T 4azs_A          356 EKQ---GFWHDDVRPWNVM  371 (569)
T ss_dssp             HHT---TCEESCCCGGGEE
T ss_pred             HHC---CceeccCchHhEE
Confidence            995   6999999999984

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.80  E-value=6.2e-20  Score=165.98  Aligned_cols=131  Identities=14%  Similarity=0.170  Sum_probs=97.6

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhh-HhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGV-KEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~-~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|.+..++.     .|++|.+...  .... +.+..+..+++.++|+||+++++++.++  
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~--   96 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGH-----VIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN--   96 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCC-----EEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred             hccccccceeeecCCeeEEEEEEecCCe-----EEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC--
Confidence            4668888999999999999999976554     3788887632  2222 3344455578888999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+|||||+ ++.+..++....  ..+++..+..++.|++.||.|||+.  .+|+||||||+||.
T Consensus        97 ~~~~lv~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil  157 (318)
T 2dyl_A           97 TDVFIAMELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNIL  157 (318)
T ss_dssp             SEEEEEECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEE
T ss_pred             CcEEEEEecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEE
Confidence            8899999999 556666655422  2589999999999999999999983  15999999999984

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.79  E-value=5e-20  Score=179.56  Aligned_cols=115  Identities=14%  Similarity=0.096  Sum_probs=84.9

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-----C----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-----S----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-----~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      ..+.||+|+||.||+|.+.+..       +++|....     .    ....++|.+|+.+|++++|+||+.+..++... 
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~~~-------~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-  411 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLDFD-------VIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL-  411 (540)
T ss_dssp             --------CCEEEEEEECSSCE-------EEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET-
T ss_pred             CCCEEeeCCCEEEEEEEECCCe-------EEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC-
Confidence            3578999999999999666544       33443221     1    11235589999999999999999666665553 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +..|||||||++|+|.+++..           ++.|+.|++.||.|||++   +|+||||||+||+
T Consensus       412 -~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NIL  463 (540)
T 3en9_A          412 -DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFI  463 (540)
T ss_dssp             -TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEE
T ss_pred             -CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEE
Confidence             667999999999999999875           457999999999999995   6999999999984

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.77  E-value=5.2e-19  Score=158.62  Aligned_cols=124  Identities=10%  Similarity=0.068  Sum_probs=95.1

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------------------hhhHhHHHHHH
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------------------QGVKEFINDVN  228 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------------------~~~~~~~~E~~  228 (316)
                      ..+......|...+.||+|+||.||+|.+ .++.     .+++|.+....                   .....+.+|+.
T Consensus        83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~-----~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~  156 (282)
T 1zar_A           83 HRLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFG-----ECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR  156 (282)
T ss_dssp             HHHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTE-----EEEEEEECC------CCCC-------CHHHHHHHHHHHHHH
T ss_pred             HHHHhCCeEEEecCEeccCCCceEEEEEe-CCCC-----EEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHH
Confidence            34444455667779999999999999999 4332     37888875321                   13456899999


Q ss_pred             HHHhCCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEe
Q 021173          229 TLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFY  308 (316)
Q Consensus       229 ~l~~l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHr  308 (316)
                      +|++++  | +.+++++..   +..||||||++||+|.+ +..         .....++.|++.||.|||+.   +||||
T Consensus       157 ~l~~l~--~-~~v~~~~~~---~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHr  217 (282)
T 1zar_A          157 ALQKLQ--G-LAVPKVYAW---EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHG  217 (282)
T ss_dssp             HHHHTT--T-SSSCCEEEE---ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred             HHHhcc--C-CCcCeEEec---cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeC
Confidence            999999  5 677776654   56799999999999988 422         12346999999999999995   69999


Q ss_pred             ccCCCCCC
Q 021173          309 YFEMIKTE  316 (316)
Q Consensus       309 DlKp~NI~  316 (316)
                      ||||+||+
T Consensus       218 Dlkp~NIL  225 (282)
T 1zar_A          218 DLSQYNVL  225 (282)
T ss_dssp             CCSTTSEE
T ss_pred             CCCHHHEE
Confidence            99999984

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.71  E-value=5.4e-18  Score=159.86  Aligned_cols=133  Identities=14%  Similarity=0.160  Sum_probs=94.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCC-CCcceee-------
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQH-PNLCKLL-------  242 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~H-pnIv~l~-------  242 (316)
                      .+|...++||+|+||.||+|.+..++.     .||||.+..    .....+.|.+|+.++..+.| .|...+.       
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~-----~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~  152 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGE-----SFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF  152 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCC
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCC-----ceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhccccc
Confidence            446677899999999999999886665     388888762    22335779999999999987 3221111       


Q ss_pred             --------------eEEEcCC---CCeEEEEEecCCCCCHHHHHhc----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 021173          243 --------------GFHARDG---SDQRMLIYERLFHGSLDRLIYG----RSDGPPIDWNTRVKIALCAAQGLTFLHEEG  301 (316)
Q Consensus       243 --------------g~~~~~~---~~~~~lV~Ey~~~GsL~~~L~~----~~~~~~l~~~~~~~ia~qia~gL~yLH~~~  301 (316)
                                    .++....   ....+++|+++ +|+|.+++..    ......+++..++.|+.||+.||.|||+. 
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-  230 (413)
T 3dzo_A          153 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-  230 (413)
T ss_dssp             CCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             chhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence                          1111110   13457777755 6799998851    11123588899999999999999999995 


Q ss_pred             CCCcEEeccCCCCCC
Q 021173          302 PFQVIFYYFEMIKTE  316 (316)
Q Consensus       302 ~~~IiHrDlKp~NI~  316 (316)
                        +||||||||+||+
T Consensus       231 --~iiHrDiKp~NIL  243 (413)
T 3dzo_A          231 --GLVHTYLRPVDIV  243 (413)
T ss_dssp             --TEECSCCCGGGEE
T ss_pred             --CcccCCcccceEE
Confidence              7999999999984

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.68  E-value=3.1e-17  Score=145.01  Aligned_cols=122  Identities=11%  Similarity=-0.006  Sum_probs=86.5

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch-------------------------hhHhHHHHHHHHH
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ-------------------------GVKEFINDVNTLA  231 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~~l~  231 (316)
                      |...+.||+|+||.||+|.+..++.   ...+|+|.+.....                         ....+.+|+.+|.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~  125 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGK---PVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE  125 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTE---EEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCc---EeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence            4567899999999999999833322   01167776542110                         1135789999999


Q ss_pred             hCCCCCc--ceeeeEEEcCCCCeEEEEEecCCC-C----CHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCC
Q 021173          232 SLQHPNL--CKLLGFHARDGSDQRMLIYERLFH-G----SLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH-EEGPF  303 (316)
Q Consensus       232 ~l~HpnI--v~l~g~~~~~~~~~~~lV~Ey~~~-G----sL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH-~~~~~  303 (316)
                      .+.|++|  ..++.+      +..+|||||+.+ |    +|.+++..      +++..+..++.|++.||.||| +.   
T Consensus       126 ~l~~~~i~~p~~~~~------~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---  190 (258)
T 1zth_A          126 RAKEAGVSVPQPYTY------MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---  190 (258)
T ss_dssp             HHHHTTCCCCCEEEE------ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---
T ss_pred             HHHhCCCCCCeEEEc------CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---
Confidence            9988764  333332      346899999942 4    77776543      234456789999999999999 74   


Q ss_pred             CcEEeccCCCCCC
Q 021173          304 QVIFYYFEMIKTE  316 (316)
Q Consensus       304 ~IiHrDlKp~NI~  316 (316)
                      +||||||||+||+
T Consensus       191 givHrDlkp~NIL  203 (258)
T 1zth_A          191 ELVHADLSEYNIM  203 (258)
T ss_dssp             CEECSSCSTTSEE
T ss_pred             CEEeCCCCHHHEE
Confidence            7999999999984

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.53  E-value=3.4e-15  Score=138.69  Aligned_cols=119  Identities=7%  Similarity=-0.031  Sum_probs=79.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCch---------------hhHhH--------HHHHHHHHh
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQ---------------GVKEF--------INDVNTLAS  232 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---------------~~~~~--------~~E~~~l~~  232 (316)
                      -|.+...||+|+||.||+|...++..      +|||.+.....               ....+        .+|...|.+
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~------vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r  169 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQ------KVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA  169 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCE------EEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCE------EEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence            47888999999999999999877654      67776542110               01112        245556666


Q ss_pred             CCCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCC
Q 021173          233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEM  312 (316)
Q Consensus       233 l~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp  312 (316)
                      +.+.++.-..-+..    ...+|||||+.|+.|.+++..         .....++.||+.+|.|||.+   +||||||||
T Consensus       170 L~~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp  233 (397)
T 4gyi_A          170 LYEEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNE  233 (397)
T ss_dssp             HHHTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCST
T ss_pred             HHhcCCCCCeeeec----cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCH
Confidence            64433322111111    223799999999888654321         12356789999999999995   699999999


Q ss_pred             CCCC
Q 021173          313 IKTE  316 (316)
Q Consensus       313 ~NI~  316 (316)
                      .||+
T Consensus       234 ~NIL  237 (397)
T 4gyi_A          234 FNIL  237 (397)
T ss_dssp             TSEE
T ss_pred             HHEE
Confidence            9985

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.05  E-value=4.5e-10  Score=98.54  Aligned_cols=112  Identities=10%  Similarity=0.038  Sum_probs=83.5

Q ss_pred             HHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-hhhHhHHHHHHHHHhCC-CCCcceeeeEEEcC
Q 021173          171 AAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-QGVKEFINDVNTLASLQ-HPNLCKLLGFHARD  248 (316)
Q Consensus       171 ~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~  248 (316)
                      .....+|.....++.|+++.||++...++ .      +++|...... .....+.+|+.+|+.+. +..+.++++++...
T Consensus        10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~~~-~------~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~   82 (263)
T 3tm0_A           10 KKLIEKYRCVKDTEGMSPAKVYKLVGENE-N------LYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD   82 (263)
T ss_dssp             HHHHTTSEEEECCSCCSSSEEEEEECSSC-E------EEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred             HHHhccceeEeeccCCCCCeEEEEECCCC-c------EEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC
Confidence            34456787778888888999999975543 2      6777765311 23346899999999995 67788899888763


Q ss_pred             CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          249 GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                        +..|+||||++|.+|.+.+...        .....++.+++.+|..||+
T Consensus        83 --~~~~lv~e~i~G~~l~~~~~~~--------~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           83 --GWSNLLMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             --TEEEEEEECCSSEEHHHHCCTT--------TCHHHHHHHHHHHHHHHHH
T ss_pred             --CceEEEEEecCCeehhhccCCc--------ccHHHHHHHHHHHHHHHhC
Confidence              7889999999999998764211        1234678899999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.79  E-value=5.8e-09  Score=90.68  Aligned_cols=96  Identities=13%  Similarity=0.080  Sum_probs=66.7

Q ss_pred             eecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC--cceeeeEEEcCCCCeEEEEEecCC
Q 021173          184 SEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN--LCKLLGFHARDGSDQRMLIYERLF  261 (316)
Q Consensus       184 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~g~~~~~~~~~~~lV~Ey~~  261 (316)
                      +.|..+.||++...++..      +++|.....  ....+.+|+.+++.+.+.+  +.+++++....  +..++||||++
T Consensus        29 ~gg~~~~v~~~~~~~g~~------~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~--~~~~~v~e~i~   98 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPV------LFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEA--GRDWLLLGEVP   98 (264)
T ss_dssp             CTTSSCEEEEEECTTSCC------EEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--SCEEEEEECCS
T ss_pred             cCCCCceEEEEecCCCCe------EEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC--CCCEEEEEecC
Confidence            456669999997655443      666665432  3356889999999986444  45688877653  67899999999


Q ss_pred             CCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 021173          262 HGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE  300 (316)
Q Consensus       262 ~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~  300 (316)
                      |.+|.  ...      .+   ...++.+++..|..||..
T Consensus        99 G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~  126 (264)
T 1nd4_A           99 GQDLL--SSH------LA---PAEKVSIMADAMRRLHTL  126 (264)
T ss_dssp             SEETT--TSC------CC---HHHHHHHHHHHHHHHTTS
T ss_pred             CcccC--cCc------CC---HhHHHHHHHHHHHHHhCC
Confidence            98884  211      22   125677888888888874

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.77  E-value=9.7e-09  Score=94.34  Aligned_cols=109  Identities=12%  Similarity=0.078  Sum_probs=77.2

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecC--CCc--hhhHhHHHHHHHHHhCC--CCCcceeeeEEEcCCC-C
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLN--PSS--QGVKEFINDVNTLASLQ--HPNLCKLLGFHARDGS-D  251 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~~--~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~-~  251 (316)
                      ..+.|+.|.++.||+....++.       +++|+..  ...  .....+.+|+.+++.|.  +..+.++++++.+... +
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~-------~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g  114 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQT-------YVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIG  114 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCE-------EEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTS
T ss_pred             eEEEcCCcccceEEEEEECCce-------EEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccC
Confidence            3467899999999998876542       5566554  221  22457889999999997  4567888888865311 4


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      ..|+||||++|..|.+..     ...++...+..++.+++..|..||.
T Consensus       115 ~~~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             SCEEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            579999999998774321     1137788888999999999999997

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.99  E-value=1.3e-05  Score=71.60  Aligned_cols=104  Identities=15%  Similarity=0.141  Sum_probs=71.1

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCC--cceeeeEEEcCC-CCeEEE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPN--LCKLLGFHARDG-SDQRML  255 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-Hpn--Iv~l~g~~~~~~-~~~~~l  255 (316)
                      .+.++.|.+..||+..   . .      +++|... .......+.+|..+|+.+. +..  +..++.+....+ ....|+
T Consensus        25 i~~~~~G~~n~v~~v~---~-~------~vlR~~~-~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~   93 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---R-D------FIFKFPK-HSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFA   93 (304)
T ss_dssp             CCEEEECSSEEEEEST---T-S------EEEEEES-SHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCE
T ss_pred             eEecCCCCcceEEEEC---C-E------EEEEecC-CcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceE
Confidence            4678999999999863   2 2      5566543 2234567899999998884 333  344544433221 123589


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      ||||++|..|.+....     .++..++..++.+++..|..||.
T Consensus        94 vm~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~  132 (304)
T 3sg8_A           94 GFTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHS  132 (304)
T ss_dssp             EEECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHc
Confidence            9999999888654432     26778888889999999999996

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.89  E-value=8e-05  Score=66.68  Aligned_cols=103  Identities=16%  Similarity=0.137  Sum_probs=68.1

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCC---CcceeeeEEEcCCCCeEEEE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHP---NLCKLLGFHARDGSDQRMLI  256 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~g~~~~~~~~~~~lV  256 (316)
                      ...++.|....||+.   ++ .      +.+|.-. .......+.+|..+|..|.+.   .+.+.+.++... .+..++|
T Consensus        24 v~~l~~G~~n~v~~v---g~-~------~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~-~g~~~~v   91 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NG-D------WVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS-DGNPFVG   91 (306)
T ss_dssp             EEEEEECSSEEEEEE---TT-T------EEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT-TSCEEEE
T ss_pred             eeecCCCcceeEEEE---CC-E------EEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC-CCceEEE
Confidence            366888888999987   32 2      5555532 233456789999999999742   355667666532 3567899


Q ss_pred             EecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          257 YERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       257 ~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      |||++|..|.+....     .++......++.+++..|..||.
T Consensus        92 ~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           92 YRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             EECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhc
Confidence            999999888664322     14555556666666666666664

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=97.66  E-value=0.00022  Score=62.01  Aligned_cols=103  Identities=17%  Similarity=0.091  Sum_probs=68.1

Q ss_pred             ceeeecCce-EEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeEEEEEe
Q 021173          181 RCISEGLSS-VMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       181 ~~IG~G~fg-~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      ..+..|..+ .||+.....++.     .+.+|.-.  ......+.+|..+|+.+. +--+.++++++.+.  +..+||||
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~-----~~~lk~~~--~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--~~~~lvme  100 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAP-----ELFLKHGK--GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--DDAWLLTT  100 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCC-----CEEEEEEE--THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--TEEEEEEE
T ss_pred             EEccCCCcCCeEEEEEecCCCe-----EEEEEECC--CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--CeEEEEEE
Confidence            345556554 689877655433     15555543  223456888999998885 44467788888774  78899999


Q ss_pred             cCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          259 RLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       259 y~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      +++|.++.+......       .....++.+++..|.-||.
T Consensus       101 ~l~G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A          101 AIPGKTAFQVLEEYP-------DSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             CCCSEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHT
T ss_pred             eeCCccccccccCCH-------HHHHHHHHHHHHHHHHhcC
Confidence            999988877654321       2233466677777777774

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.04  E-value=0.0005  Score=62.46  Aligned_cols=84  Identities=7%  Similarity=-0.020  Sum_probs=51.3

Q ss_pred             cee-eecCceEEEEEEEC---CCCceeEEEEEeeeecCCCc---h-hhHhHHHHHHHHHhCC-C--CCcceeeeEEEcCC
Q 021173          181 RCI-SEGLSSVMYRASFG---DDASTSKKFEATVTRLNPSS---Q-GVKEFINDVNTLASLQ-H--PNLCKLLGFHARDG  249 (316)
Q Consensus       181 ~~I-G~G~fg~Vy~~~~~---~~~~~~~~~~vavK~~~~~~---~-~~~~~~~E~~~l~~l~-H--pnIv~l~g~~~~~~  249 (316)
                      +.| +.|....+|+....   ++....  ..+.+|......   . ....+.+|+.+|+.|. +  ..+.++++++.+..
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~--~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQ--QKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEE--EEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EECCCCCccceEEEEEEecccCCCCCC--ceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            556 77888999988754   110000  125555543222   0 1356889999998885 3  35677887775531


Q ss_pred             -CCeEEEEEecCCCCCHH
Q 021173          250 -SDQRMLIYERLFHGSLD  266 (316)
Q Consensus       250 -~~~~~lV~Ey~~~GsL~  266 (316)
                       .+..++||||++|..|.
T Consensus       104 ~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTSSCEEEEECCCCBCCC
T ss_pred             ccCCceEEEEecCCCChh
Confidence             13568999999986543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.57  E-value=0.011  Score=51.96  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=52.5

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCC---CCcceeeeEEEcCCCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQH---PNLCKLLGFHARDGSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~H---pnIv~l~g~~~~~~~~  251 (316)
                      .+.....+|.|..+.||+.++.++..      +.+|..... ......|..|...|+.|.-   --+.+++++.      
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~------~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------   83 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTP------LFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------   83 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCE------EEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCE------EEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc------
Confidence            34455788999999999999988764      666765422 2223457899999998842   2344555432      


Q ss_pred             eEEEEEecCCCCC
Q 021173          252 QRMLIYERLFHGS  264 (316)
Q Consensus       252 ~~~lV~Ey~~~Gs  264 (316)
                      .-++||||++++.
T Consensus        84 ~~~lv~e~l~~~~   96 (288)
T 3f7w_A           84 DRTLAMEWVDERP   96 (288)
T ss_dssp             TTEEEEECCCCCC
T ss_pred             CceEEEEeecccC
Confidence            2378999998764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.44  E-value=0.0099  Score=53.01  Aligned_cols=72  Identities=11%  Similarity=0.148  Sum_probs=38.9

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC--CCCcceeeeE-----E-EcCCCCe
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--HPNLCKLLGF-----H-ARDGSDQ  252 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~g~-----~-~~~~~~~  252 (316)
                      ..|+.|..+.||+....++.       +++|......   ..+..|+.++..|.  .-.+..++..     + ..  .+.
T Consensus        38 ~~l~gG~~n~~~~v~~~~~~-------~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~--~~~  105 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTDSGA-------VCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKH--GSF  105 (346)
T ss_dssp             EECC----CEEEEEEETTEE-------EEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEE--TTE
T ss_pred             eeccccccCcEEEEEeCCCC-------EEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEE--CCE
Confidence            44555778899998865542       5667665432   23344555555553  1233344321     1 12  267


Q ss_pred             EEEEEecCCCCC
Q 021173          253 RMLIYERLFHGS  264 (316)
Q Consensus       253 ~~lV~Ey~~~Gs  264 (316)
                      .++||||++|..
T Consensus       106 ~~~l~~~i~G~~  117 (346)
T 2q83_A          106 LFVVYDWIEGRP  117 (346)
T ss_dssp             EEEEEECCCCBC
T ss_pred             EEEEEEeecCcc
Confidence            899999999864

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=95.83  E-value=0.02  Score=51.19  Aligned_cols=94  Identities=15%  Similarity=0.103  Sum_probs=67.8

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC---CCCcceeeeEEEcCCCCeEEE
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ---HPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      ..+.|+.|.+..+|+....++ .      +.+|....  .....|..|...|+.|.   ...+.++++++...  +..++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~-~------~vlK~~~~--~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--g~~~l  108 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQ-T------VFVKINER--SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--GHSFL  108 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSC-E------EEEEEEEG--GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--SEEEE
T ss_pred             eeEEeCCccceeeeEEEECCC-e------EEEEeCCc--ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--CceEE
Confidence            346789999999999876433 2      55565432  23456889999988884   35678888887763  77999


Q ss_pred             EEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 021173          256 IYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE  300 (316)
Q Consensus       256 V~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~  300 (316)
                      ||||+++..+..                 ..+.++...|+-||..
T Consensus       109 vme~l~G~~~~~-----------------~~~~~lG~~LA~LH~~  136 (312)
T 3jr1_A          109 LLEALNKSKNKQ-----------------SSFTIFAEKIAQLHQI  136 (312)
T ss_dssp             EEECCCCCCCCT-----------------THHHHHHHHHHHHHHC
T ss_pred             EEEeccCCCCCc-----------------hhHHHHHHHHHHHHcC
Confidence            999999875410                 2456788999999985

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=95.28  E-value=0.045  Score=50.18  Aligned_cols=82  Identities=10%  Similarity=0.106  Sum_probs=48.8

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--------chhhHhHHHHHHHHHhCCC--CC-cceeeeEEEcC
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--------SQGVKEFINDVNTLASLQH--PN-LCKLLGFHARD  248 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~H--pn-Iv~l~g~~~~~  248 (316)
                      .+.||.|.++.||++....++.     .+++|.....        .....++..|.++|..+..  +. +.+++.+. . 
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~-----~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-~-  107 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDR-----ALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-T-  107 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----C-----EEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-T-
T ss_pred             EEECCCCceEEEEEEEECCCCc-----EEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-C-
Confidence            3678999999999997653322     2556654321        1123457789999888742  33 34555432 2 


Q ss_pred             CCCeEEEEEecCCCCC-HHHHHh
Q 021173          249 GSDQRMLIYERLFHGS-LDRLIY  270 (316)
Q Consensus       249 ~~~~~~lV~Ey~~~Gs-L~~~L~  270 (316)
                        +..+|||||+.+.. +...+.
T Consensus       108 --~~~~lvmE~l~g~~~~~~~l~  128 (397)
T 2olc_A          108 --EMAVTVMEDLSHLKIARKGLI  128 (397)
T ss_dssp             --TTTEEEECCCTTSEEHHHHHH
T ss_pred             --CccEEEEEeCCCcchHHHHHh
Confidence              45689999998743 444443

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=94.52  E-value=0.11  Score=45.56  Aligned_cols=71  Identities=8%  Similarity=0.085  Sum_probs=42.1

Q ss_pred             CcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCc-ceeeeEEEcCCCCeEEEEE
Q 021173          179 SDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL-CKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       179 ~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~~~lV~  257 (316)
                      ..+.|+.|....+|+.    ..       +.+|.-...........+|+.+++.+....+ .++++++.    +.-++|+
T Consensus        22 ~i~~l~gG~tN~~~~~----~~-------~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~~~----~~~~~v~   86 (301)
T 3dxq_A           22 GPLERLGGLTNLVFRA----GD-------LCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHVDP----ATGVMVT   86 (301)
T ss_dssp             SCEEEESCSSEEEEEE----TT-------EEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEECT----TTCCEEE
T ss_pred             ceeEcCCcccccccee----ee-------EEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEEEC----CCCEEEE
Confidence            3578888999999998    22       5555544322222234578888877753233 45665432    3347899


Q ss_pred             ecC-CCCC
Q 021173          258 ERL-FHGS  264 (316)
Q Consensus       258 Ey~-~~Gs  264 (316)
                      ||+ ++.+
T Consensus        87 e~i~~g~~   94 (301)
T 3dxq_A           87 RYIAGAQT   94 (301)
T ss_dssp             ECCTTCEE
T ss_pred             eecCCCcc
Confidence            999 5543

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=88.05  E-value=0.073  Score=50.27  Aligned_cols=60  Identities=10%  Similarity=0.101  Sum_probs=16.4

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEee------eecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATV------TRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vav------K~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      .+.||   ||.||+|.+.....     .||+      |....   ..+....|.+|..++..++|+|+++.+++...
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~-----~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHM-----PVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             TTTSS---BCCC---------C-----CBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccCC---chhhhcccccccCC-----chhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            46666   99999999875422     3666      55442   23334568899999999999999999887654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=86.15  E-value=4  Score=35.69  Aligned_cols=91  Identities=9%  Similarity=0.059  Sum_probs=52.7

Q ss_pred             cCHHHHHHHhCCCCC-----cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC--CC
Q 021173          165 FPLDEVAAACHNFFS-----DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH--PN  237 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~-----~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H--pn  237 (316)
                      ++.+++......|..     ...++ |....||+....++..      +.+|...........+..|..++..|..  -.
T Consensus        11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~------~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~   83 (328)
T 1zyl_A           11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRR------FVVKFYRPERWTADQILEEHQFALQLVNDEVP   83 (328)
T ss_dssp             CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCC------EEEEEECTTTSCHHHHHHHHHHHHHHHHTTCS
T ss_pred             CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCE------EEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCe
Confidence            444555544443422     23466 7778999887655433      6677665332234566778888887742  22


Q ss_pred             cceeeeE-----EEcCCCCeEEEEEecCCCCC
Q 021173          238 LCKLLGF-----HARDGSDQRMLIYERLFHGS  264 (316)
Q Consensus       238 Iv~l~g~-----~~~~~~~~~~lV~Ey~~~Gs  264 (316)
                      +..++..     ...  .+..++||||++|..
T Consensus        84 vp~~~~~~g~~~~~~--~g~~~~l~~~i~G~~  113 (328)
T 1zyl_A           84 VAAPVAFNGQTLLNH--QGFYFAVFPSVGGRQ  113 (328)
T ss_dssp             BCCCCCBTTBSCEEE--TTEEEEEEECCCCEE
T ss_pred             ecceeecCCcEEEEE--CCEEEEEEEecCCCC
Confidence            4444443     111  256688999998753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=85.53  E-value=2.6  Score=36.83  Aligned_cols=91  Identities=12%  Similarity=0.009  Sum_probs=51.7

Q ss_pred             ccCHHHHHHHhCCCCCc-----ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC-
Q 021173          164 NFPLDEVAAACHNFFSD-----RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-  237 (316)
Q Consensus       164 ~~~~~ei~~~t~~f~~~-----~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn-  237 (316)
                      .++.+++......|...     +.|+.|....+|+....++.       +.+|..... .....+..|+.++..|.... 
T Consensus         6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~-------~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~   77 (322)
T 2ppq_A            6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-------LILTLYEKR-VEKNDLPFFLGLMQHLAAKGL   77 (322)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-------EEEEEECC----CCHHHHHHHHHHHHHHTTC
T ss_pred             cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCcc-------EEEEEeCCC-CCHHHHHHHHHHHHHHHHCCC
Confidence            35667777776667653     34556777899998876553       556665531 12334567777777764212 


Q ss_pred             -cceeeeE------EEcCCCCeEEEEEecCCCCC
Q 021173          238 -LCKLLGF------HARDGSDQRMLIYERLFHGS  264 (316)
Q Consensus       238 -Iv~l~g~------~~~~~~~~~~lV~Ey~~~Gs  264 (316)
                       +.+++..      ...  .+..+++|+|++|..
T Consensus        78 ~vP~~~~~~~g~~~~~~--~g~~~~l~~~l~G~~  109 (322)
T 2ppq_A           78 SCPLPLPRKDGELLGEL--SGRPAALISFLEGMW  109 (322)
T ss_dssp             CCCCBCCBTTCCSCEEE--TTEEEEEEECCCCBC
T ss_pred             CCCcccCCCCCCEEEEE--CCEEEEEEEeCCCcC
Confidence             3333321      111  256789999999864

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=83.29  E-value=1.6  Score=39.80  Aligned_cols=77  Identities=21%  Similarity=0.259  Sum_probs=40.9

Q ss_pred             ceeeecCceEEEEEEECCCC----ceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeEEE
Q 021173          181 RCISEGLSSVMYRASFGDDA----STSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQRML  255 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~~l  255 (316)
                      +.|..|....+|++...++.    ....  .+.+++-.........+.+|..+++.|. +.-..++++++.    +  .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~--~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~----~--g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPR--EVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP----E--GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCS--EEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET----T--EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCC--eEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC----C--cc
Confidence            45666777889998875310    0000  1445543222223455678999998885 322356666553    2  29


Q ss_pred             EEecCCCCCH
Q 021173          256 IYERLFHGSL  265 (316)
Q Consensus       256 V~Ey~~~GsL  265 (316)
                      ||||++|..|
T Consensus       128 v~e~i~G~~l  137 (379)
T 3feg_A          128 LEQYIPSRPL  137 (379)
T ss_dssp             EEECCSEEEC
T ss_pred             EEEEecCccC
Confidence            9999998554

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=82.90  E-value=4.2  Score=37.25  Aligned_cols=80  Identities=11%  Similarity=0.081  Sum_probs=44.5

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeec-------CCC-c--hhhHhHHHHHHHHHh-CCCCCcceeeeEEEcC
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRL-------NPS-S--QGVKEFINDVNTLAS-LQHPNLCKLLGFHARD  248 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~-------~~~-~--~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~~  248 (316)
                      .+.||.|..+.||++...+ ..      +.+|..       ... .  .....+..|+..+.. .....+.+++.+. . 
T Consensus        39 i~~l~~G~~n~vyrv~~~~-~~------~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~-~-  109 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVGSS-GS------LVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD-R-  109 (420)
T ss_dssp             EEECCCSSSCEEEEEECSS-CE------EEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE-T-
T ss_pred             EEEccCCCcEEEEEEEcCC-ce------EEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC-C-
Confidence            4678999999999996432 22      566621       111 1  022234444433321 2234566677664 2 


Q ss_pred             CCCeEEEEEecC-CCC-CHHHHHh
Q 021173          249 GSDQRMLIYERL-FHG-SLDRLIY  270 (316)
Q Consensus       249 ~~~~~~lV~Ey~-~~G-sL~~~L~  270 (316)
                        +..++||||+ ++. .+.+.+.
T Consensus       110 --~~~~lv~e~l~~g~~~l~~~l~  131 (420)
T 2pyw_A          110 --TMALIGMRYLEPPHIILRKGLI  131 (420)
T ss_dssp             --TTTEEEECCCCTTCEEHHHHHH
T ss_pred             --CccEEEEeecCCcchhHHHHHh
Confidence              5679999999 773 4544443

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=82.17  E-value=0.077  Score=50.26  Aligned_cols=31  Identities=10%  Similarity=-0.027  Sum_probs=25.1

Q ss_pred             chhhHhHHHHHHHHHhCCCCCcceeeeEEEc
Q 021173          217 SQGVKEFINDVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       217 ~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ..+.++|..|++++.+++|+|||+++|||..
T Consensus       320 ~~g~~eF~~Eve~L~~i~HrNLV~L~gyC~s  350 (487)
T 3oja_A          320 GQGSETERLECERENQARQREIDALKEQYRT  350 (487)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             cccHHHHHHHHHHHhcccccchhhHHHHhcC
Confidence            3456789999999999999999999999976

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=81.18  E-value=2.4  Score=38.09  Aligned_cols=73  Identities=14%  Similarity=0.226  Sum_probs=41.6

Q ss_pred             ceeeecCceEEEEEEECCC---------CceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCC-cceeeeEEEcCCC
Q 021173          181 RCISEGLSSVMYRASFGDD---------ASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPN-LCKLLGFHARDGS  250 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~---------~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~Hpn-Iv~l~g~~~~~~~  250 (316)
                      ..|+.|....+|+....++         ..      +.+|..............|..++..+...+ ..++++..  +  
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~------~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--  108 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTR------VLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--  108 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCE------EEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCce------EEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--
Confidence            4567787889999987641         21      455554432222223467888888885333 34666543  1  


Q ss_pred             CeEEEEEecCCCCCH
Q 021173          251 DQRMLIYERLFHGSL  265 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL  265 (316)
                      +  ++||||++|..|
T Consensus       109 ~--~~v~e~i~G~~l  121 (369)
T 3c5i_A          109 G--GRIEEWLYGDPL  121 (369)
T ss_dssp             T--EEEEECCCSEEC
T ss_pred             C--cEEEEEecCCcC
Confidence            2  689999987543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=80.91  E-value=9.5  Score=33.37  Aligned_cols=79  Identities=15%  Similarity=0.075  Sum_probs=40.4

Q ss_pred             ceeeecCceE-EEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC--CCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSV-MYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--HPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~-Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.|+.|.... +|+....++..      +.+|......  ...+..|+.++..+.  .-.+.+++.+...   +. ++||
T Consensus        24 ~~l~gg~s~~~~~r~~~~~~~~------~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~---~g-~ll~   91 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRSPTGAK------AVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAPEIYAEEHA---RG-LLLI   91 (333)
T ss_dssp             CC--------CCEEEECTTCCE------EEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCCCEEEEETT---TT-EEEE
T ss_pred             eECCCCCCCceEEEEEcCCCCe------EEEEECCCCC--CccccHHHHHHHHHHhCCCCCCceeeecCC---CC-EEEE
Confidence            4455554444 66765432332      4445433221  134556777777764  2345567766433   22 7899


Q ss_pred             ecCCCCCHHHHHhc
Q 021173          258 ERLFHGSLDRLIYG  271 (316)
Q Consensus       258 Ey~~~GsL~~~L~~  271 (316)
                      |++.+..+.+++..
T Consensus        92 e~l~~~~l~~~l~~  105 (333)
T 3csv_A           92 EDLGDALFTEVINN  105 (333)
T ss_dssp             CCCCSCBHHHHHHH
T ss_pred             eeCCCcchHHHhcC
Confidence            99988788777654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=80.62  E-value=2.9  Score=38.64  Aligned_cols=78  Identities=13%  Similarity=0.159  Sum_probs=45.4

Q ss_pred             ceeeecCceEEEEEEECCCCcee--EEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCc-ceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTS--KKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL-CKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~~~lV~  257 (316)
                      +.|+.|....||++...++....  ....+.+|..... .....+.+|..++..|...++ .++++.+.    +  .+||
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~----~--g~v~  151 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS----G--GRLE  151 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET----T--EEEE
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC----C--CEEE
Confidence            56777888999999876420000  0001445544321 111456689999988853333 56776543    2  2899


Q ss_pred             ecCCCCCH
Q 021173          258 ERLFHGSL  265 (316)
Q Consensus       258 Ey~~~GsL  265 (316)
                      ||++|.+|
T Consensus       152 e~l~G~~l  159 (429)
T 1nw1_A          152 EYIPSRPL  159 (429)
T ss_dssp             CCCCEEEC
T ss_pred             EEeCCccc
Confidence            99986443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	316
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-15
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	7e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-14
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-14
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	8e-14
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-13
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-13
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-13
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	6e-13
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-13
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-12
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-12
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-11
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-11
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	8e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-10
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-10
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-09
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	5e-09
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-09
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-08
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	7e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-07
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-07
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	5e-07
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-06
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-06
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-05
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-04

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 1e-15
 Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 10/121 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             +  G    ++   +          +  V  L   S     F+ + N +  LQH  L +
Sbjct: 19  ERLGAGQFGEVWMGYYNGHT------KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVR 72

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L         +   +I E + +GSL   +   S G  +  N  + +A   A+G+ F+ E 
Sbjct: 73  LYAVVT---QEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER 128

Query: 301 G 301
            
Sbjct: 129 N 129

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.2 bits (174), Expect = 7e-15
 Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 10/121 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           + I +G    +            +  +  V  +   +   + F+ + + +  L+H NL +
Sbjct: 13  QTIGKGEFGDVMLG-------DYRGNKVAVKCIKNDAT-AQAFLAEASVMTQLRHSNLVQ 64

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           LLG    +      ++ E +  GSL   +  R     +  +  +K +L   + + +L   
Sbjct: 65  LLGVIVEE-KGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN 122

Query: 301 G 301
            
Sbjct: 123 N 123

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.5 bits (172), Expect = 1e-14
 Identities = 19/126 (15%), Positives = 48/126 (38%), Gaps = 10/126 (7%)

Query: 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQH 235
            +D  +  G    + +          K+ +  +  L   +     +E + +   +  L +
Sbjct: 12  IADIELGCGNFGSVRQGV---YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 68

Query: 236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295
           P + +L+G      ++  ML+ E    G L + + G+     I  +   ++    + G+ 
Sbjct: 69  PYIVRLIGVCQ---AEALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMK 123

Query: 296 FLHEEG 301
           +L E+ 
Sbjct: 124 YLEEKN 129

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 2e-14
 Identities = 16/121 (13%), Positives = 41/121 (33%), Gaps = 10/121 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           + +  G   V+    +        +++  +  +   S    EFI +   + +L H  L +
Sbjct: 10  KELGTGQFGVVKYGKWRG------QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L G   +       +I E + +G L   +              +++     + + +L  +
Sbjct: 64  LYGVCTKQ--RPIFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK 119

Query: 301 G 301
            
Sbjct: 120 Q 120

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 4e-14
 Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 8/125 (6%)

Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH 235
           +F     +  G   V+++ S      +       +  L        + I ++  L     
Sbjct: 7   DFEKISELGAGNGGVVFKVS---HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295
           P +    G    DG  +  +  E +  GSLD+++        I      K+++   +GLT
Sbjct: 64  PYIVGFYGAFYSDG--EISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLT 118

Query: 296 FLHEE 300
           +L E+
Sbjct: 119 YLREK 123

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (168), Expect = 5e-14
 Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 10/121 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           + I  G    +Y+  +  D +        +    P+ Q ++ F N+V  L   +H N+  
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAV-----KMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
            +G+     + Q  ++ +     SL   ++        +    + IA   AQG+ +LH +
Sbjct: 69  FMGYST---APQLAIVTQWCEGSSLYHHLHII--ETKFEMIKLIDIARQTAQGMDYLHAK 123

Query: 301 G 301
            
Sbjct: 124 S 124

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 8e-14
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 10/121 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           + I  G   +++   + +        +  +  +   +   ++FI +   +  L HP L +
Sbjct: 11  QEIGSGQFGLVHLGYWLNKD------KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L G           L++E + HG L    Y R+        T + + L   +G+ +L E 
Sbjct: 65  LYGVCLEQ--APICLVFEFMEHGCLSD--YLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120

Query: 301 G 301
            
Sbjct: 121 C 121

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 1e-13
 Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 20/139 (14%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASL-QHPN 237
           + +  G    +  A+      +       V  L PS+     +  ++++  L+ L  H N
Sbjct: 29  KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88

Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR---------------SDGPPIDWNT 282
           +  LLG          ++I E   +G L   +  +                D   +D   
Sbjct: 89  IVNLLGACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146

Query: 283 RVKIALCAAQGLTFLHEEG 301
            +  +   A+G+ FL  + 
Sbjct: 147 LLSFSYQVAKGMAFLASKN 165

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 1e-13
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 11/125 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHP 236
             + +G   V+ R  +  DA + K     V  L P      + + +FI +VN + SL H 
Sbjct: 14  EKLGDGSFGVVRRGEW--DAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71

Query: 237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
           NL +L G      +    ++ E    GSL   +            T  + A+  A+G+ +
Sbjct: 72  NLIRLYGVVL---TPPMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGY 126

Query: 297 LHEEG 301
           L  + 
Sbjct: 127 LESKR 131

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.4 bits (164), Expect = 1e-13
 Identities = 16/125 (12%), Positives = 44/125 (35%), Gaps = 8/125 (6%)

Query: 178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHP 236
             D+ +  G    + +  +       K     + +   +      E + + N +  L +P
Sbjct: 10  LEDKELGSGNFGTVKKGYYQMK-KVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP 68

Query: 237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
            + +++G    +     ML+ E    G L++ +        +     +++    + G+ +
Sbjct: 69  YIVRMIGICEAES---WMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKY 122

Query: 297 LHEEG 301
           L E  
Sbjct: 123 LEESN 127

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 2e-13
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 5/121 (4%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           RCI EG    +++  +    + +        +   S    ++F+ +  T+    HP++ K
Sbjct: 13  RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L+G       +   +I E    G L   +  R     +D  + +  A   +  L +L  +
Sbjct: 73  LIGVITE---NPVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK 127

Query: 301 G 301
            
Sbjct: 128 R 128

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 5e-13
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             I +G    ++R          +  E  V   +   +       ++     L+H N+  
Sbjct: 9   ESIGKGRFGEVWRG-------KWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61

Query: 241 LLGFHARDGSD--QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
            +    +D     Q  L+ +   HGSL   +        +     +K+AL  A GL  LH
Sbjct: 62  FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLH 117

Query: 299 EEG 301
            E 
Sbjct: 118 MEI 120

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.9 bits (160), Expect = 6e-13
 Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 13/146 (8%)

Query: 165 FPLDEVAAACHNFFS---------DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP 215
           F  ++   A   F           ++ I  G    +                    +   
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 216 SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG 275
           + +  ++F+++ + +    HPN+  L G   +      M+I E + +GSLD   + R + 
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKS--TPVMIITEFMENGSLDS--FLRQND 122

Query: 276 PPIDWNTRVKIALCAAQGLTFLHEEG 301
                   V +    A G+ +L +  
Sbjct: 123 GQFTVIQLVGMLRGIAAGMKYLADMN 148

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 8e-13
 Identities = 24/121 (19%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             + +G    +Y+A    +  TS    A V     S + +++++ +++ LAS  HPN+ K
Sbjct: 18  GELGDGAFGKVYKAQ---NKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVK 73

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           LL     +  +   ++ E    G++D ++       P+  +    +       L +LH+ 
Sbjct: 74  LLDAFYYE--NNLWILIEFCAGGAVDAVMLEL--ERPLTESQIQVVCKQTLDALNYLHDN 129

Query: 301 G 301
            
Sbjct: 130 K 130

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 1e-12
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASL 233
           +F  +  I  G    +Y  +  D+    KK    V  LN  +    V +F+ +   +   
Sbjct: 30  HF--NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF 85

Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
            HPN+  LLG   R      +++   + HG L   I   +  P       +   L  A+G
Sbjct: 86  SHPNVLSLLGICLRS-EGSPLVVLPYMKHGDLRNFIRNETHNPT--VKDLIGFGLQVAKG 142

Query: 294 LTFLHEEG 301
           + FL  + 
Sbjct: 143 MKFLASKK 150

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.6 bits (154), Expect = 3e-12
 Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ 234
            +      +  G    +Y          S      V  L   +  V+EF+ +   +  ++
Sbjct: 17  TDITMKHKLGGGQYGEVYEGV---WKKYSLTV--AVKTLKEDTMEVEEFLKEAAVMKEIK 71

Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL 294
           HPNL +LLG   R+      +I E + +G+L   +    +   +     + +A   +  +
Sbjct: 72  HPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLR-ECNRQEVSAVVLLYMATQISSAM 128

Query: 295 TFLHEEG 301
            +L ++ 
Sbjct: 129 EYLEKKN 135

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.1 bits (153), Expect = 5e-12
 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 15/130 (11%)

Query: 177 FFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFINDVNTLA 231
            FSD R I  G    +Y A    D   S+     + +++ S     +  ++ I +V  L 
Sbjct: 16  LFSDLREIGHGSFGAVYFAR---DVRNSEVV--AIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 232 SLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAA 291
            L+HPN  +  G + R+      L+ E     + D L   +    P+       +   A 
Sbjct: 71  KLRHPNTIQYRGCYLRE--HTAWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGAL 125

Query: 292 QGLTFLHEEG 301
           QGL +LH   
Sbjct: 126 QGLAYLHSHN 135

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 1e-11
 Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 5/124 (4%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
             I  G      +       S  K            ++  K+  +++VN L  L+HPN+ 
Sbjct: 10  YTIGTGSYGRCQKI---RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 66

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIY-GRSDGPPIDWNTRVKIALCAAQGLTFLH 298
           +         +    ++ E    G L  +I  G  +   +D    +++       L   H
Sbjct: 67  RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126

Query: 299 EEGP 302
               
Sbjct: 127 RRSD 130

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.0 bits (150), Expect = 1e-11
 Identities = 18/129 (13%), Positives = 45/129 (34%), Gaps = 10/129 (7%)

Query: 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ 234
            +   +  + +G    ++  ++             +  L P +   + F+ +   +  L+
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTT------RVAIKTLKPGTMSPEAFLQEAQVMKKLR 70

Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL 294
           H  L +L    +    +   ++ E +  GSL   + G   G  +     V +A   A G+
Sbjct: 71  HEKLVQLYAVVSE---EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGM 126

Query: 295 TFLHEEGPF 303
            ++      
Sbjct: 127 AYVERMNYV 135

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 2e-11
 Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 25/144 (17%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASL-QHPN 237
           + +  G    +  A+    + T    +  V  L   +     +  ++++  +  L  H N
Sbjct: 43  KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 102

Query: 238 LCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR--------------------SDGPP 277
           +  LLG           LI+E   +G L   +  +                     D   
Sbjct: 103 IVNLLGACTLS--GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 160

Query: 278 IDWNTRVKIALCAAQGLTFLHEEG 301
           + +   +  A   A+G+ FL  + 
Sbjct: 161 LTFEDLLCFAYQVAKGMEFLEFKS 184

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 61.4 bits (148), Expect = 2e-11
 Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 25/152 (16%)

Query: 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLAS 232
           +N    R I EG    +++A               V  L    S+    +F  +   +A 
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 72

Query: 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRS------------------- 273
             +PN+ KLLG  A        L++E + +G L+  +   S                   
Sbjct: 73  FDNPNIVKLLGVCAVG--KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 130

Query: 274 --DGPPIDWNTRVKIALCAAQGLTFLHEEGPF 303
               PP+    ++ IA   A G+ +L E    
Sbjct: 131 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFV 162

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (147), Expect = 3e-11
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 12/122 (9%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
             I +G S  +Y A    D +T ++    + ++N   Q  KE  IN++  +   ++PN+ 
Sbjct: 26  EKIGQGASGTVYTAM---DVATGQEV--AIRQMNLQQQPKKELIINEILVMRENKNPNIV 80

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
             L  +     D+  ++ E L  GSL  ++        +D      +     Q L FLH 
Sbjct: 81  NYLDSYLVG--DELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS 134

Query: 300 EG 301
             
Sbjct: 135 NQ 136

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 59.7 bits (144), Expect = 8e-11
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 8/121 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             +  G   V++R     + +T + F A      P         N+++ +  L HP L  
Sbjct: 35  EELGSGAFGVVHRCV---EKATGRVFVAKFIN-TPYPLDKYTVKNEISIMNQLHHPKLIN 90

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L          + +LI E L  G L   I   ++   +     +     A +GL  +HE 
Sbjct: 91  LHDAFEDK--YEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHEH 146

Query: 301 G 301
            
Sbjct: 147 S 147

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 1e-10
 Identities = 18/121 (14%), Positives = 36/121 (29%), Gaps = 8/121 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
           + + EG    +  A    +  T +     +  +  +    +    ++     L H N+ K
Sbjct: 11  QTLGEGAYGEVQLAV---NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
             G       + + L  E    G L   I        +      +       G+ +LH  
Sbjct: 68  FYGHRREG--NIQYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI 122

Query: 301 G 301
           G
Sbjct: 123 G 123

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 1e-10
 Identities = 16/121 (13%), Positives = 40/121 (33%), Gaps = 9/121 (7%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             +  G   +++R     + S+ K +      +            +++ L   +H N+  
Sbjct: 11  EDLGRGEFGIVHRCV---ETSSKKTY--MAKFVKVKGTDQVLVKKEISILNIARHRNILH 65

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L         ++ ++I+E +    +   I   +    ++    V       + L FLH  
Sbjct: 66  LHESFESM--EELVMIFEFISGLDIFERI--NTSAFELNEREIVSYVHQVCEALQFLHSH 121

Query: 301 G 301
            
Sbjct: 122 N 122

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 2e-10
 Identities = 20/136 (14%), Positives = 48/136 (35%), Gaps = 11/136 (8%)

Query: 175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLAS 232
                 R + +G   ++Y            +    +  +N   S +   EF+N+ + +  
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDG-------PPIDWNTRVK 285
               ++ +LLG  ++      ++I E +  G L   +              P   +  ++
Sbjct: 80  FNCHHVVRLLGVVSQG--QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 137

Query: 286 IALCAAQGLTFLHEEG 301
           +A   A G+ +L+   
Sbjct: 138 MAGEIADGMAYLNANK 153

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-10
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 181 RCISEGLSSVMYRASF-GDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
           + +  G    +Y+  +  +             R   S +  KE +++   +AS+ +P++C
Sbjct: 15  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           +LLG      +    LI + +  G L  L Y R     I     +   +  A+G+ +L +
Sbjct: 75  RLLGICL---TSTVQLITQLMPFGCL--LDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129

Query: 300 EGP 302
              
Sbjct: 130 RRL 132

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 58.5 bits (141), Expect = 2e-10
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             +  G   V++R +   + +T   F A    + P     +    ++ T++ L+HP L  
Sbjct: 32  EELGTGAFGVVHRVT---ERATGNNF-AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 87

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEE 300
           L      D   + ++IYE +  G L   +        +  +  V+      +GL  +HE 
Sbjct: 88  LHDAFEDDN--EMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN 143

Query: 301 G 301
            
Sbjct: 144 N 144

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 5e-10
 Identities = 16/123 (13%), Positives = 36/123 (29%), Gaps = 9/123 (7%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             I EG   ++  A    D     +               +  + ++  L   +H N+  
Sbjct: 14  SYIGEGAYGMVCSAY---DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 70

Query: 241 LLGFHARDGSDQRMLIY--ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
           +         +Q   +Y    L    L +L+  +     +  +          +GL ++H
Sbjct: 71  INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIH 126

Query: 299 EEG 301
              
Sbjct: 127 SAN 129

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 55.5 bits (133), Expect = 1e-09
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 10/125 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS--QGVKEFINDVNTLASLQHPNL 238
             +  G  S ++ A    D    +     V R + +        F  +    A+L HP +
Sbjct: 13  EILGFGGMSEVHLAR---DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 69

Query: 239 CKLLGFHARDGS--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
             +      +        ++ E +   +L  +++      P+     +++   A Q L F
Sbjct: 70  VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIADACQALNF 126

Query: 297 LHEEG 301
            H+ G
Sbjct: 127 SHQNG 131

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 3e-09
 Identities = 16/139 (11%), Positives = 40/139 (28%), Gaps = 15/139 (10%)

Query: 181 RCISEGLSSVMYRASF--GDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL 238
           + +  G    +  A     D  +T +     + +   +    +  ++++  L  + H   
Sbjct: 19  KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 78

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGP-------------PIDWNTRVK 285
              L           M+I E    G+L   +  + +                +     + 
Sbjct: 79  VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 138

Query: 286 IALCAAQGLTFLHEEGPFQ 304
            +   A+G+ FL       
Sbjct: 139 YSFQVAKGMEFLASRKCIH 157

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (130), Expect = 4e-09
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 14/125 (11%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHP 236
           R + +G    +Y A    +  +       +  L  +    +    +   +V   + L+HP
Sbjct: 12  RPLGKGKFGNVYLAR---EKQSKFIL--ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 237 NLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
           N+ +L G+       +  LI E    G++ R +   S     D           A  L++
Sbjct: 67  NILRLYGYFHDA--TRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSY 121

Query: 297 LHEEG 301
            H + 
Sbjct: 122 CHSKR 126

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.3 bits (130), Expect = 4e-09
 Identities = 19/119 (15%), Positives = 35/119 (29%), Gaps = 8/119 (6%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCK 240
             +  G  S +  A    D  T K                    N++  L  ++HPN+  
Sbjct: 15  DVLGTGAFSEVILAE---DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 71

Query: 241 LLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           L   +         LI + +  G L   I  +            ++       + +LH+
Sbjct: 72  LDDIYESG--GHLYLIMQLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHD 125

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 5e-09
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 20/139 (14%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVT----RLNPSSQGVKEFINDVNTLASL-QH 235
           + + EG    +  A               V     + + + + + + I+++  +  + +H
Sbjct: 19  KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78

Query: 236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGR-------------SDGPPIDWNT 282
            N+  LLG   +D      +I E    G+L   +  R             +    +    
Sbjct: 79  KNIINLLGACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 283 RVKIALCAAQGLTFLHEEG 301
            V  A   A+G+ +L  + 
Sbjct: 137 LVSCAYQVARGMEYLASKK 155

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 9e-09
 Identities = 11/89 (12%), Positives = 26/89 (29%), Gaps = 4/89 (4%)

Query: 217 SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR----MLIYERLFHGSLDRLIYGR 272
            Q  +    ++  +  L H N+ +L  F    G  +      L+ + +         +  
Sbjct: 54  LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113

Query: 273 SDGPPIDWNTRVKIALCAAQGLTFLHEEG 301
                +             + L ++H  G
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFG 142

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.3 bits (125), Expect = 2e-08
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 10/126 (7%)

Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL 233
           +F   + + EG  S +  A    + +TS+++   +           V     + + ++ L
Sbjct: 9   DFKFGKILGEGSFSTVVLAR---ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 65

Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
            HP   KL      D  ++         +G L + I         D              
Sbjct: 66  DHPFFVKLYFTFQDD--EKLYFGLSYAKNGELLKYIR---KIGSFDETCTRFYTAEIVSA 120

Query: 294 LTFLHE 299
           L +LH 
Sbjct: 121 LEYLHG 126

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 6e-08
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 9/136 (6%)

Query: 168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFIN 225
            E+  +C      + I  G    +Y+      +   +   A +  L    + +   +F+ 
Sbjct: 2   TEIHPSC--VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVA-IKTLKAGYTEKQRVDFLG 58

Query: 226 DVNTLASLQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVK 285
           +   +    H N+ +L G  ++      M+I E + +G+LD+  + R           V 
Sbjct: 59  EAGIMGQFSHHNIIRLEGVISKY--KPMMIITEYMENGALDK--FLREKDGEFSVLQLVG 114

Query: 286 IALCAAQGLTFLHEEG 301
           +    A G+ +L    
Sbjct: 115 MLRGIAAGMKYLANMN 130

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 7e-08
 Identities = 24/130 (18%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS------QGVKEFINDVNTLASLQ 234
             I EG    +++A    D     +F A + R+   +            +  +  L + +
Sbjct: 13  AEIGEGAYGKVFKAR---DLKNGGRFVA-LKRVRVQTGEEGMPLSTIREVAVLRHLETFE 68

Query: 235 HPNLCKLLGFHARDGSDQR---MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAA 291
           HPN+ +L        +D+     L++E +       L   +   P +   T   +     
Sbjct: 69  HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD--KVPEPGVPTETIKDMMFQLL 126

Query: 292 QGLTFLHEEG 301
           +GL FLH   
Sbjct: 127 RGLDFLHSHR 136

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.7 bits (118), Expect = 2e-07
 Identities = 17/128 (13%), Positives = 34/128 (26%), Gaps = 7/128 (5%)

Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTS--KKFEATVTRLNPSSQGVKEFINDVNTLASL 233
           +F   R I  G    +Y     D       K  +    ++             ++ +++ 
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
             P +  +         D+   I + +  G L   +   S             A     G
Sbjct: 65  DCPFIVCMSYAFHTP--DKLSFILDLMNGGDLHYHL---SQHGVFSEADMRFYAAEIILG 119

Query: 294 LTFLHEEG 301
           L  +H   
Sbjct: 120 LEHMHNRF 127

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 3e-07
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 14/125 (11%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLC 239
           R +  G  S ++ A    + + ++K    V  L P  +  K+   ++  L +L+  PN+ 
Sbjct: 41  RKLGRGKYSEVFEAI---NITNNEKV--VVKILKPVKK--KKIKREIKILENLRGGPNII 93

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
            L        S    L++E + +    +L         +             + L + H 
Sbjct: 94  TLADIVKDPVSRTPALVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHS 147

Query: 300 EGPFQ 304
            G   
Sbjct: 148 MGIMH 152

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 3e-07
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
            + +  G++  + +     +  T +KF   +  L    +  +E         + Q P++ 
Sbjct: 17  SQVLGLGINGKVLQIF---NKRTQEKF--ALKMLQDCPKARREV---ELHWRASQCPHIV 68

Query: 240 KLLGF--HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFL 297
           +++    +   G    +++ E L  G L   I  R D          +I     + + +L
Sbjct: 69  RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQA-FTEREASEIMKSIGEAIQYL 127

Query: 298 HEEG 301
           H   
Sbjct: 128 HSIN 131

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 4e-07
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 7/125 (5%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLC 239
           + +  G    +  A    D  T  K           S+   K    ++  L  ++H N+ 
Sbjct: 24  QPVGSGAYGAVCSAV---DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 80

Query: 240 KLLG-FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
            LL  F   +  D     Y  L    +   +        +  +    +     +GL ++H
Sbjct: 81  GLLDVFTPDETLDDFTDFY--LVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 138

Query: 299 EEGPF 303
             G  
Sbjct: 139 AAGII 143

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 4e-07
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 8/125 (6%)

Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQ 234
           NF     I EG   V+Y+A    +  T +       RL+  ++GV    I +++ L  L 
Sbjct: 3   NFQKVEKIGEGTYGVVYKAR---NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 59

Query: 235 HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGL 294
           HPN+ KLL       ++ ++ +     H  L + +   +    I             QGL
Sbjct: 60  HPNIVKLLDVIH---TENKLYLVFEFLHQDLKKFMDASALT-GIPLPLIKSYLFQLLQGL 115

Query: 295 TFLHE 299
            F H 
Sbjct: 116 AFCHS 120

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 48.0 bits (113), Expect = 5e-07
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 10/122 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGV-KEFINDVNTLASLQHPNLC 239
             I EG   V+Y+A      +  + F     RL    +G+    I +++ L  L+H N+ 
Sbjct: 8   EKIGEGTYGVVYKAQN----NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           KL          + +L++E L       L         ++  T     L    G+ + H+
Sbjct: 64  KLYDVIHTK--KRLVLVFEHLDQDLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHD 118

Query: 300 EG 301
             
Sbjct: 119 RR 120

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 2e-06
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 12/121 (9%)

Query: 183 ISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG----VKEFINDVNTLASLQHPNL 238
           + EG  + +Y+A    D +T++       +L   S+      +  + ++  L  L HPN+
Sbjct: 6   LGEGQFATVYKAR---DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 62

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
             LL            L+++ +       +   + +   +  +      L   QGL +LH
Sbjct: 63  IGLLDAFGHK--SNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQGLEYLH 117

Query: 299 E 299
           +
Sbjct: 118 Q 118

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (109), Expect = 2e-06
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLA-S 232
           +F   + + +G    ++ A       T++ F     + +       V+  + +   L+ +
Sbjct: 3   DFILHKMLGKGSFGKVFLAE---FKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 59

Query: 233 LQHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQ 292
            +HP L  +         +    + E L  G L   I         D +     A     
Sbjct: 60  WEHPFLTHMFCTFQTK--ENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIIL 114

Query: 293 GLTFLHEEG 301
           GL FLH +G
Sbjct: 115 GLQFLHSKG 123

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 2e-06
 Identities = 21/124 (16%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 181 RCISEGLSSVMYRASFGDDASTS-----KKFEATVTRLNPSSQGVKEFINDVNTLASLQH 235
             +  G  +V+ +     + ST      K  +   T+ +      ++   +V+ L  +QH
Sbjct: 16  EELGSGQFAVVKKCR---EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72

Query: 236 PNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLT 295
           PN+  L   +  +     +LI E +  G L   +    +   +      +       G+ 
Sbjct: 73  PNVITLHEVY--ENKTDVILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVY 127

Query: 296 FLHE 299
           +LH 
Sbjct: 128 YLHS 131

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 21/138 (15%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 177 FFSD----RCISEGLSSVMYRASFGDDASTSKKF--------EATVTRLNPSSQGVKEFI 224
           F+ +      +  G+SSV+ R        T K++                   +  +  +
Sbjct: 1   FYENYEPKEILGRGVSSVVRRCI---HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 57

Query: 225 NDVNTLASLQ-HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTR 283
            +V+ L  +  HPN+ +L   +  + +    L+++ +  G L   +  +     +     
Sbjct: 58  KEVDILRKVSGHPNIIQLKDTY--ETNTFFFLVFDLMKKGELFDYLTEK---VTLSEKET 112

Query: 284 VKIALCAAQGLTFLHEEG 301
            KI     + +  LH+  
Sbjct: 113 RKIMRALLEVICALHKLN 130

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 11/125 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEA-TVTRLNPSSQGVKEFINDVNTLASLQHPNLC 239
             +  G    +  A    D  T  +     ++R   S    K    ++  L  ++H N+ 
Sbjct: 24  SPVGSGAYGSVCAAF---DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80

Query: 240 KLLGFHARDGS---DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTF 296
            LL       S      + +   L    L+ ++  +     +  +    +     +GL +
Sbjct: 81  GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKY 136

Query: 297 LHEEG 301
           +H   
Sbjct: 137 IHSAD 141

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 9/122 (7%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKE-FINDVNTLASLQHPNLC 239
             I EG    +++A    +  T +       RL+   +GV    + ++  L  L+H N+ 
Sbjct: 8   EKIGEGTYGTVFKAK---NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64

Query: 240 KLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE 299
           +L      D   +  L++E       D   Y  S    +D            +GL F H 
Sbjct: 65  RLHDVLHSD--KKLTLVFEFCDQ---DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119

Query: 300 EG 301
             
Sbjct: 120 RN 121

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.1 bits (98), Expect = 5e-05
 Identities = 12/123 (9%), Positives = 32/123 (26%), Gaps = 10/123 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNL 238
           + +  G    +          +   +   +         + ++  +N+   L ++  P L
Sbjct: 47  KTLGTGSFGRVMLVK---HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
            KL      +      ++ E +  G +   +                 A        +LH
Sbjct: 104 VKLEFSFKDN--SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLH 158

Query: 299 EEG 301
              
Sbjct: 159 SLD 161

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 10/123 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNL 238
           R +  G    ++           + +   V +       + V+   ++   L+ + HP +
Sbjct: 10  RTLGTGSFGRVHLIR---SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 66

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
            ++ G        Q  +I + +  G L  L+                 A      L +LH
Sbjct: 67  IRMWGTFQDA--QQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLH 121

Query: 299 EEG 301
            + 
Sbjct: 122 SKD 124

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 17/123 (13%), Positives = 35/123 (28%), Gaps = 10/123 (8%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNL 238
           + + +G    +       + +T + +   + R     +   V   + +   L + +HP L
Sbjct: 11  KLLGKGTFGKVILVR---EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67

Query: 239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLH 298
             L         D+   + E    G L   +   S                    L +LH
Sbjct: 68  TALKYAFQTH--DRLCFVMEYANGGELFFHL---SRERVFTEERARFYGAEIVSALEYLH 122

Query: 299 EEG 301
              
Sbjct: 123 SRD 125

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 13/128 (10%)

Query: 181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQG-VKEFINDVNTLASLQHPNLC 239
             I +G    +++A       T +K       +    +G     + ++  L  L+H N+ 
Sbjct: 16  AKIGQGTFGEVFKAR---HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVV 72

Query: 240 KLLGFHARDGS------DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
            L+       S          L+++   H     L            +   ++      G
Sbjct: 73  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQMLLNG 129

Query: 294 LTFLHEEG 301
           L ++H   
Sbjct: 130 LYYIHRNK 137

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 17/128 (13%), Positives = 31/128 (24%), Gaps = 14/128 (10%)

Query: 181 RCISEGLSSVMYRASFGDDASTS-----KKFEATVTRLNPSSQGVKEFINDVNTLASLQ- 234
             +  G    +Y        S +     K  E                  +V  L  +  
Sbjct: 10  PLLGSGGFGSVYSGI---RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66

Query: 235 -HPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQG 293
               + +LL +  R   D  +LI ER             ++   +             + 
Sbjct: 67  GFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFI--TERGALQEELARSFFWQVLEA 122

Query: 294 LTFLHEEG 301
           +   H  G
Sbjct: 123 VRHCHNCG 130

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	316
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.96
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.96
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.96
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.95
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.95
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.95
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.95
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.95
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.95
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.95
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.95
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.95
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.95
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.95
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.95
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.95
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.95
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.94
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.94
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.94
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.94
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.94
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.94
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.94
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.94
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.93
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.93
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.93
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.93
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.93
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.93
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.93
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.93
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.93
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.93
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.93
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.93
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.92
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.92
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.92
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.91
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.91
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.9
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.9
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.9
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.9
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.89
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.89
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.83
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.76
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.82
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.55
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	94.91
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	90.04
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	90.0
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	85.36

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=6.5e-31  Score=234.80  Aligned_cols=132  Identities=17%  Similarity=0.257  Sum_probs=117.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||||.+..+....++|.+|+.+|++++|||||+++|+|.++  +.+
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~-----~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~   88 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSL-----TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--PPF   88 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTE-----EEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCe-----EEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeC--Cee
Confidence            4567778999999999999999987664     389999987666778899999999999999999999999874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||||++|+|.++|.... ...+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        89 ~iv~E~~~~g~l~~~l~~~~-~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NIL  147 (287)
T d1opja_          89 YIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCL  147 (287)
T ss_dssp             EEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEeecccCcchHHHhhhcc-ccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEE
Confidence            99999999999999998654 34699999999999999999999995   6999999999984

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=4.8e-30  Score=230.38  Aligned_cols=143  Identities=16%  Similarity=0.275  Sum_probs=116.8

Q ss_pred             cCHHHHHHHhCCC---------CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC
Q 021173          165 FPLDEVAAACHNF---------FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL  233 (316)
Q Consensus       165 ~~~~ei~~~t~~f---------~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l  233 (316)
                      ++++++..++.+|         ...++||+|+||+||+|.+..++...  ..|+||.+..  .....+.|.+|+.+|+++
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l   84 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE--IFVAIKTLKSGYTEKQRRDFLSEASIMGQF   84 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CC--EEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEE--EEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence            5666666655444         44579999999999999987554311  2378888763  345567899999999999


Q ss_pred             CCCCcceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCC
Q 021173          234 QHPNLCKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMI  313 (316)
Q Consensus       234 ~HpnIv~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~  313 (316)
                      +|||||+++|+|.++  +.++||||||++|+|.+++....  ..++|.+++.|+.||+.||.|||++   +||||||||+
T Consensus        85 ~HpnIv~l~g~~~~~--~~~~iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~  157 (299)
T d1jpaa_          85 DHPNVIHLEGVVTKS--TPVMIITEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAAR  157 (299)
T ss_dssp             CCTTBCCEEEEECSS--SSCEEEEECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred             CCCCCccEEEEEeeC--CEEEEEEEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccc
Confidence            999999999999874  78999999999999999988753  2599999999999999999999995   7999999999


Q ss_pred             CCC
Q 021173          314 KTE  316 (316)
Q Consensus       314 NI~  316 (316)
                      ||+
T Consensus       158 NIL  160 (299)
T d1jpaa_         158 NIL  160 (299)
T ss_dssp             GEE
T ss_pred             eEE
Confidence            984

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.7e-30  Score=224.30  Aligned_cols=129  Identities=17%  Similarity=0.279  Sum_probs=115.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.++..      ||||.+.......++|.+|+.++++++|||||+++|+|.++  +..+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~------vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~--~~~~   76 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDK------VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--APIC   76 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEE------EEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--SSCE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCE------EEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccC--CceE
Confidence            467778999999999999999987643      89999987666678899999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||||++|+|.+++....  ..++|..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus        77 lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nil  133 (263)
T d1sm2a_          77 LVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCL  133 (263)
T ss_dssp             EEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEE
T ss_pred             EEEEecCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhhee
Confidence            9999999999999988753  3589999999999999999999995   6999999999984

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6e-30  Score=226.60  Aligned_cols=129  Identities=13%  Similarity=0.078  Sum_probs=111.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||+||+|++..++.     .||+|.+...  ....+.|.+|+.+|++++|||||++++++.++  +.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~--~~   77 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEE-----AVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG--NI   77 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET--TE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCC-----EEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC--ce
Confidence            578888999999999999999987665     3888887532  33456799999999999999999999999985  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||||++|+|.++|....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        78 ~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NIL  135 (271)
T d1nvra_          78 QYLFLEYCSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLL  135 (271)
T ss_dssp             EEEEEECCTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             eEEEEeccCCCcHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEE
Confidence            999999999999999997643   599999999999999999999995   6999999999984

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-29  Score=224.66  Aligned_cols=127  Identities=20%  Similarity=0.270  Sum_probs=110.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      .++|...+.||+|+||.||+|++.++        ||||.++.   .....+.|.+|+.+|++++|||||+++|++.+   
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~~~--------vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~---   75 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWHGD--------VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA---   75 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESSSE--------EEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred             cccEEEEEEEeeCCCcEEEEEEECCE--------EEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec---
Confidence            45788889999999999999986542        78888753   34556789999999999999999999999865   


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.++||||||++|+|.++|....  ..+++..++.|+.||+.||+|||++   +||||||||+||+
T Consensus        76 ~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiL  136 (276)
T d1uwha_          76 PQLAIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIF  136 (276)
T ss_dssp             SSCEEEEECCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             cEEEEEEecCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEE
Confidence            66899999999999999998653  2599999999999999999999995   7999999999984

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.1e-30  Score=226.68  Aligned_cols=130  Identities=19%  Similarity=0.282  Sum_probs=113.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||.||+|.+.++.      .||||.+.......+.|.+|+.+|++++|||||+++|++.+   +.+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~------~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~---~~~   82 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHT------KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---EPI   82 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTE------EEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCC------EEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeecc---CCe
Confidence            356777899999999999999998654      38999988666667789999999999999999999998865   667


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||||++|+|.+++.... ...++|..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        83 ~iv~Ey~~~g~L~~~~~~~~-~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIl  141 (272)
T d1qpca_          83 YIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANIL  141 (272)
T ss_dssp             EEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EEEEEeCCCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhhee
Confidence            99999999999999887643 23599999999999999999999995   7999999999984

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.7e-29  Score=226.04  Aligned_cols=131  Identities=11%  Similarity=0.091  Sum_probs=117.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++|...+.||+|+||+||+|.+..++.     .+|+|.+.........+.+|+.+|+.++|||||++++++.++  +.+
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~-----~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~~~   76 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKK-----TYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESM--EEL   76 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--TEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCc-----EEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--CEE
Confidence            4678888999999999999999987765     389999887666667799999999999999999999999885  899


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||.||+|.++|....  ..+++.++..|+.||+.||.|||+.   +||||||||+||+
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIl  134 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENII  134 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCCccccccccee
Confidence            99999999999999998653  2599999999999999999999994   7999999999984

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-29  Score=224.62  Aligned_cols=130  Identities=17%  Similarity=0.275  Sum_probs=114.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      +.|...+.||+|+||.||+|.+..++.     .+|+|.+.. .....+.|.+|+++|++++|||||++++++.++  +.+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--~~~   84 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE--NNL   84 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEET--TEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCe-----EEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC--CeE
Confidence            457778999999999999999987765     388888763 455667899999999999999999999999885  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||||++|+|.+++....  ..+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        85 ~lvmEy~~~g~L~~~~~~~~--~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIl  142 (288)
T d2jfla1          85 WILIEFCAGGAVDAVMLELE--RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNIL  142 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhhee
Confidence            99999999999999987642  2599999999999999999999995   6999999999984

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.7e-29  Score=223.19  Aligned_cols=128  Identities=21%  Similarity=0.242  Sum_probs=112.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||+||+|.+..++.     .||+|.+.. .....+.+.+|+.+|++++|||||++++++.++  +.+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~-----~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~~   92 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQ-----EVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG--DEL   92 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCC-----EEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--TEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCC-----EEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEEC--CEE
Confidence            368999999999999999999877665     388888753 223456799999999999999999999999885  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||++|+|.+++...    .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        93 ~ivmEy~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NIL  148 (293)
T d1yhwa1          93 WVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNIL  148 (293)
T ss_dssp             EEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EEEEEecCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeE
Confidence            9999999999999988764    399999999999999999999995   7999999999984

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-29  Score=220.83  Aligned_cols=129  Identities=19%  Similarity=0.201  Sum_probs=113.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||+||+|++..++.     .||+|.+..    .....+.+.+|+.+|++++|||||++++++.++  
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--   78 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKF-----ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA--   78 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCc-----EEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEEC--
Confidence            468888999999999999999987765     388887752    223356789999999999999999999999984  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||++|+|.++|....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        79 ~~~~ivmEy~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nil  138 (263)
T d2j4za1          79 TRVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLL  138 (263)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             CEEEEEEeecCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---Ceeeeeeccccce
Confidence            88999999999999999998754   499999999999999999999995   7999999999984

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-29  Score=222.69  Aligned_cols=137  Identities=14%  Similarity=0.131  Sum_probs=107.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|.+..++.     .||+|.+..   .....+.|.+|+.+|++++|||||++++++.++..+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGK-----ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCC-----EEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCC
Confidence            578888999999999999999987765     388898763   334456799999999999999999999999765446


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCC--CCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS-DGPPIDWNTRVKIALCAAQGLTFLHEEGP--FQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~-~~~~l~~~~~~~ia~qia~gL~yLH~~~~--~~IiHrDlKp~NI~  316 (316)
                      .+|||||||++|+|.+++.... ....+++..++.|+.||+.||.|||+.+.  .+||||||||+||+
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIl  146 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF  146 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEE
T ss_pred             EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcC
Confidence            7899999999999999987531 13469999999999999999999998541  25999999999984

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=6.8e-29  Score=219.68  Aligned_cols=130  Identities=18%  Similarity=0.217  Sum_probs=110.1

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC--CCCe
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARD--GSDQ  252 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~--~~~~  252 (316)
                      ...+.||+|+||+||+|.+..++.     .||+|.+..   .....+.|.+|+++|++++|||||+++++|.+.  +...
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~-----~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~   86 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTV-----EVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC   86 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCe-----EEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCE
Confidence            445789999999999999987765     377777652   344566799999999999999999999998752  2356


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||||++|+|.++|....   .+++..+..|+.||+.||+|||+++ .+||||||||+||+
T Consensus        87 ~~ivmE~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NIL  146 (270)
T d1t4ha_          87 IVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIF  146 (270)
T ss_dssp             EEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEE
T ss_pred             EEEEEeCCCCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhce
Confidence            899999999999999998753   5999999999999999999999965 25999999999984

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.5e-29  Score=220.38  Aligned_cols=131  Identities=14%  Similarity=0.283  Sum_probs=108.7

Q ss_pred             CCCCCcce-eeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRC-ISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~-IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+. ||+|+||.||+|.+......   ..||||.++.  .....++|.+|+.+|++++|||||+++|+|.+   +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~---~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~---~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQ---IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CC---EEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES---S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCc---EEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc---C
Confidence            34555564 99999999999988644321   2488898863  34456789999999999999999999999975   5


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||++|+|.+++....  ..+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nil  141 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVL  141 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             eEEEEEEeCCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhhee
Confidence            6899999999999999987643  2599999999999999999999995   7999999999984

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.95  E-value=1.5e-28  Score=225.15  Aligned_cols=131  Identities=15%  Similarity=0.219  Sum_probs=115.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+... ....+.+.+|+.+|++++|||||++++++.++  +.
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~-----~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--~~   97 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGN-----NFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--NE   97 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTE-----EEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET--TE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCC-----EEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CE
Confidence            3578889999999999999999987765     3889988743 34456799999999999999999999999884  89


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||||+||+|.++|....  ..+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIl  156 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIM  156 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTT--SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEEEcCCCCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHee
Confidence            999999999999999997643  2599999999999999999999995   7999999999984

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9e-29  Score=217.46  Aligned_cols=129  Identities=13%  Similarity=0.219  Sum_probs=115.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|+++++..      ||||.++......++|++|+.++++++|||||+++|+|.++  +.++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~------vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~--~~~~   75 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--RPIF   75 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEE------EEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCS--SSEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCE------EEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeC--CceE
Confidence            578889999999999999999976543      88898876666678899999999999999999999999874  7899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+++|+|.+++....  ..+++..++.|+.|+++||.|||+.   +|+||||||+||+
T Consensus        76 iv~Ey~~~g~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nil  132 (258)
T d1k2pa_          76 IITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCL  132 (258)
T ss_dssp             EEEECCTTEEHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEE
T ss_pred             EEEEccCCCcHHHhhhccc--cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEE
Confidence            9999999999999987753  2589999999999999999999995   7999999999984

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.6e-29  Score=227.81  Aligned_cols=131  Identities=16%  Similarity=0.220  Sum_probs=114.8

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      .++|...+.||+|+||+||+|.+..++.     .||+|.++.  ......++.+|+.+|+.++|||||+++++|.++  +
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~   77 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGL-----VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD--G   77 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTE-----EEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS--S
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCc-----EEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--C
Confidence            5678889999999999999999987765     378887753  334456799999999999999999999999985  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+|||||||++|+|.++|....   .+++..+..++.|++.||.|||+.  .+||||||||+||+
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NIL  137 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNIL  137 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEE
T ss_pred             EEEEEEEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHee
Confidence            8999999999999999998754   499999999999999999999973  15999999999984

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.3e-28  Score=217.08  Aligned_cols=124  Identities=13%  Similarity=0.246  Sum_probs=105.9

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      +.||+|+||.||+|.+.+....   ..||||.+..   +....++|.+|+.+|++++|||||+++|+|..   +..+|||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~---~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVV---KTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---ESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSE---EEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES---SSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcC---eEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc---CCEEEEE
Confidence            5799999999999998654321   2388888863   23345679999999999999999999999975   5679999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||++|+|.+++....   .++|..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        87 E~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nil  139 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVL  139 (277)
T ss_dssp             ECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             EcCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhc
Confidence            9999999999998754   599999999999999999999995   6999999999984

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=219.21  Aligned_cols=130  Identities=14%  Similarity=0.186  Sum_probs=113.4

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC-------CchhhHhHHHHHHHHHhCCCCCcceeeeEEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP-------SSQGVKEFINDVNTLASLQHPNLCKLLGFHA  246 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-------~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~  246 (316)
                      .+.|...+.||+|+||+||+|.+..++.     .||+|.+..       .....+.|.+|+.+|++++|||||++++++.
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~-----~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~   83 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGL-----QYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE   83 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCC-----EEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            3568889999999999999999987665     378887642       1123567999999999999999999999998


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++  +.+|||||||++|+|.++|....   .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus        84 ~~--~~~~iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nil  145 (293)
T d1jksa_          84 NK--TDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIM  145 (293)
T ss_dssp             CS--SEEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             EC--CEEEEEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEE
Confidence            85  89999999999999999998754   599999999999999999999995   7999999999984

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-28  Score=223.65  Aligned_cols=137  Identities=17%  Similarity=0.230  Sum_probs=112.8

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||+||+|++...........||+|.+..  .......|.+|+.+|.++ +|||||+++++|.++  +
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~--~  114 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS--G  114 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC--C
Confidence            56788899999999999999987655433334588888763  334456799999999998 899999999999885  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD--------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFE  311 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~--------------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlK  311 (316)
                      .++||||||++|+|.++|+....                    ...++|..++.|+.||+.||.|||++   +|||||||
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlK  191 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA  191 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCc
Confidence            89999999999999999986531                    13489999999999999999999995   79999999


Q ss_pred             CCCCC
Q 021173          312 MIKTE  316 (316)
Q Consensus       312 p~NI~  316 (316)
                      |+||+
T Consensus       192 p~Nil  196 (325)
T d1rjba_         192 ARNVL  196 (325)
T ss_dssp             GGGEE
T ss_pred             hhccc
Confidence            99984

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.95  E-value=2e-28  Score=224.45  Aligned_cols=130  Identities=17%  Similarity=0.155  Sum_probs=114.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||.||+|.+..++.     .||+|.+... ....+.+.+|+.+|++|+|||||++++++.++  +.+
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~~~  101 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGR-----VFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--YEM  101 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--SEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--CEE
Confidence            568888999999999999999977665     3888887643 34456788999999999999999999999874  899


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||+||+|.+++....  ..+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       102 ~ivmE~~~gg~L~~~~~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NIL  159 (352)
T d1koba_         102 VLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIM  159 (352)
T ss_dssp             EEEEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             EEEEEcCCCChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccccccc
Confidence            99999999999999887653  3599999999999999999999995   7999999999984

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=5.8e-29  Score=221.77  Aligned_cols=129  Identities=14%  Similarity=0.295  Sum_probs=114.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|++.++..      ||||.+.......+.|.+|+.+|++++|+|||+++|+|.+   +.++
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~------vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~---~~~~   87 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGTTR------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---EPIY   87 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTEE------EEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS---SSCE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCCCE------EEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEec---CCeE
Confidence            468888999999999999999987753      8999998766667889999999999999999999999865   5689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ||||||++|+|..++.... ...++|..++.|+.||+.||.|||++   +|+||||||+||+
T Consensus        88 lv~Ey~~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIl  145 (285)
T d1fmka3          88 IVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANIL  145 (285)
T ss_dssp             EEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEecCCCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEE
Confidence            9999999999999988643 23599999999999999999999995   6999999999984

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.9e-29  Score=220.58  Aligned_cols=129  Identities=17%  Similarity=0.144  Sum_probs=113.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||+||+|.+..++.     .||||.+..    .....+.+.+|+++|++++|||||++++++.++  
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~--   80 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSR-----EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD--   80 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS--
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC--
Confidence            568889999999999999999987664     388888753    223346799999999999999999999999885  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||++|+|.+++....   .+++..+..++.|++.||+|||++   +||||||||+||+
T Consensus        81 ~~~~ivmEy~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIl  140 (288)
T d1uu3a_          81 EKLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENIL  140 (288)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             CEEEEEEEccCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccc
Confidence            88999999999999999988754   599999999999999999999995   7999999999984

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=3.8e-29  Score=225.26  Aligned_cols=131  Identities=12%  Similarity=0.112  Sum_probs=110.6

Q ss_pred             HhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC--chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          173 ACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS--SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       173 ~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ..+.|...+.||+|+||+||+|.+..++.     .||+|.+...  ......+.+|+.+|++++|||||++++++.++  
T Consensus         7 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--   79 (307)
T d1a06a_           7 IRDIYDFRDVLGTGAFSEVILAEDKRTQK-----LVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG--   79 (307)
T ss_dssp             GGGTEEEEEESBSGGGGGEEEEEETTTCC-----EEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred             CccceEEEEEEeeccCeEEEEEEECCCCC-----EEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--
Confidence            34568888999999999999999987665     3888887532  23345688999999999999999999999885  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||+||+|.++|....   .+++..+..|+.||+.||.|||+.   +||||||||+||+
T Consensus        80 ~~~~lvmE~~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil  139 (307)
T d1a06a_          80 GHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLL  139 (307)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CEEEEEEeccCCCcHHHhhhccc---CCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEeccccee
Confidence            88999999999999999998754   599999999999999999999995   7999999999984

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2.2e-28  Score=220.46  Aligned_cols=127  Identities=22%  Similarity=0.277  Sum_probs=111.0

Q ss_pred             CCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          177 FFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       177 f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      |...+.||+|+||.||+|++..++.     .||||.+...    ....+.|.+|+.+|++++|||||++++++.++  +.
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~--~~   89 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSE-----VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE--HT   89 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTE-----EEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--TE
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCc-----EEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEEC--CE
Confidence            7778999999999999999987765     3888887532    23456799999999999999999999999884  88


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +|||||||.+|+|..++....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        90 ~~iv~E~~~~g~l~~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NIL  147 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNIL  147 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEE
T ss_pred             EEEEEEecCCCchHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEE
Confidence            999999999999987776543   599999999999999999999995   6999999999984

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=7.1e-28  Score=213.68  Aligned_cols=132  Identities=14%  Similarity=0.136  Sum_probs=113.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  249 (316)
                      .++|...+.||+|+||.||+|.+..++.     .||+|.+..    +......|.+|+.+|+.++|||||++++++..++
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~   80 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHR-----DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET   80 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCC-----EEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc
Confidence            3668888999999999999999987664     389998863    2344567999999999999999999999988643


Q ss_pred             C--CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 S--DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~--~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .  ..+|||||||+||+|.+++....   .+++.+++.|+.||+.||+|||++   +||||||||+||+
T Consensus        81 ~~~~~~~lvmE~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIl  143 (277)
T d1o6ya_          81 PAGPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIM  143 (277)
T ss_dssp             SSSEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCCceEEEEEECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccc
Confidence            2  35899999999999999988754   599999999999999999999995   7999999999984

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.95  E-value=7.8e-28  Score=213.57  Aligned_cols=129  Identities=16%  Similarity=0.228  Sum_probs=112.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----------hhhHhHHHHHHHHHhCC-CCCcceeee
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----------QGVKEFINDVNTLASLQ-HPNLCKLLG  243 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~-HpnIv~l~g  243 (316)
                      ++|...+.||+|+||+||+|+...++.     .+|+|.+....          ...+.+.+|+.+|++++ |||||++++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~-----~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~   77 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCK-----EYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD   77 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCC-----EEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEe
Confidence            578888999999999999999977664     38888875321          12346889999999997 999999999


Q ss_pred             EEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          244 FHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       244 ~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++.++  +.+|||||||++|+|.++|....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        78 ~~~~~--~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nil  142 (277)
T d1phka_          78 TYETN--TFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENIL  142 (277)
T ss_dssp             EEECS--SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             ecccC--cceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEE
Confidence            99884  89999999999999999998754   599999999999999999999995   7999999999984

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=8.6e-28  Score=213.90  Aligned_cols=134  Identities=15%  Similarity=0.269  Sum_probs=112.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      +.|...++||+|+||.||+|.+..++.. ....||||.+..  ......+|++|+.+|++++|||||+++|+|.+.  +.
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~--~~   83 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGK-KEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY--KP   83 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---C-CEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--SS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCE-EEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecC--Cc
Confidence            3567779999999999999998765431 123488998863  334456799999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||||.+|+|.+++....  ..++|..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        84 ~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NIL  142 (283)
T d1mqba_          84 MMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNIL  142 (283)
T ss_dssp             EEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             eEEEEEecccCcchhhhhccc--ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEE
Confidence            999999999999999887653  2599999999999999999999995   7999999999984

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.5e-28  Score=219.34  Aligned_cols=129  Identities=13%  Similarity=0.101  Sum_probs=114.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|+...++.     .||+|.+...    ....+.+.+|+.+|++++|||||++++++.++  
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~-----~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~--   77 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGR-----YYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH--   77 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS--
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCC-----EEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccc--
Confidence            568888999999999999999987665     3888887632    23456789999999999999999999999984  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|||||||+||+|.+++....   .+++..+..++.||+.||+|||++   +||||||||+||+
T Consensus        78 ~~~~iv~ey~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIL  137 (337)
T d1o6la_          78 DRLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLM  137 (337)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             cccccceeccCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeE
Confidence            89999999999999999998754   599999999999999999999995   7999999999984

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-27  Score=215.82  Aligned_cols=134  Identities=21%  Similarity=0.322  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...++||+|+||.||+|.+.+++..   ..|+||.+..  .....+.|.+|+.+|+++ +|||||+++|+|.++  +
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~---~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~--~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR--G   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEE---EEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET--T
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeE---EEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecC--C
Confidence            5677789999999999999999776542   2367777642  334566799999999999 699999999999984  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRS-------------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~-------------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++|||||+++|+|.++|+...             ....++|..++.++.||+.||.|||+.   +||||||||+||+
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL  159 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNIL  159 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEE
Confidence            8999999999999999997641             234699999999999999999999994   7999999999984

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.2e-27  Score=214.59  Aligned_cols=133  Identities=17%  Similarity=0.324  Sum_probs=111.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      .+|...++||+|+||+||+|.+..++.... +.||+|.+..  .....++|.+|+.+|++++|||||+++|+|.+   +.
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~---~~   84 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVK-IPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT---ST   84 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CC-EEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES---SS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEE-EEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence            468888999999999999999876654222 2478888763  33456789999999999999999999999987   56


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+++|||+.+|+|.+++....  ..+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        85 ~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIl  143 (317)
T d1xkka_          85 VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVL  143 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             eeEEEEeccCCcccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcce
Confidence            789999999999999888753  3599999999999999999999995   6999999999984

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.8e-27  Score=210.72  Aligned_cols=132  Identities=17%  Similarity=0.278  Sum_probs=111.1

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+..++...  ..|++|.+..  .....+.|.+|+.+|++++|||||+++|++.+   +.
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~--~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---~~   81 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPA--LAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE---NP   81 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CC--EEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---SS
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCcee--EEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---Ce
Confidence            46788899999999999999987554321  2377888763  34445779999999999999999999999965   67


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||||++|+|.+++....  ..+++..++.++.||+.||.|||++   +||||||||+||.
T Consensus        82 ~~iv~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIl  140 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVL  140 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEEEeccCCcHHhhhhccC--CCCCHHHHHHHHHHHHHHhhhhccc---Ceeccccchhhee
Confidence            899999999999999887653  2589999999999999999999995   6999999999984

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.5e-28  Score=215.05  Aligned_cols=129  Identities=15%  Similarity=0.263  Sum_probs=108.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      ++|...+.||+|+||.||+|.+.+.       .||||.++.+ ...+.|.+|+.+|++++|||||+++|+|.++ .+.++
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~-------~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-~~~~~   77 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYRGN-------KVAVKCIKND-ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE-KGGLY   77 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTE-------EEEEEECCCC-C--HHHHHTHHHHTTCCCTTBCCEEEEECCC---CCE
T ss_pred             HHeEEeEEEecCCCeEEEEEEECCe-------EEEEEEECcH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEEec-CCcEE
Confidence            3566679999999999999999653       2899998743 3457799999999999999999999998753 35689


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||+++|+|.++|..+. ...++|..++.|+.||+.||.|||+.   +||||||||+||.
T Consensus        78 lv~ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil  135 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVL  135 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhhe
Confidence            9999999999999997643 22489999999999999999999994   7999999999984

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=1.7e-27  Score=215.16  Aligned_cols=129  Identities=15%  Similarity=0.146  Sum_probs=113.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||+||+|++..++.     .||+|.+..    .....+.+.+|+.+|+.++|||||++++++.++  
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~-----~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~--   76 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGR-----YYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA--   76 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS--
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCC-----EEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeC--
Confidence            468888999999999999999987665     388888753    223356789999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+|+|||||.||+|..++....   .+++..+..++.||+.||.|||++   +||||||||+||+
T Consensus        77 ~~~~ivmE~~~gg~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIL  136 (316)
T d1fota_          77 QQIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENIL  136 (316)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             CeeeeEeeecCCccccccccccc---cccccHHHHHHHHHHHhhhhhccC---cEEccccCchhee
Confidence            89999999999999999998765   489999999999999999999995   7999999999984

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.94  E-value=2.8e-27  Score=212.30  Aligned_cols=144  Identities=22%  Similarity=0.269  Sum_probs=117.9

Q ss_pred             HHHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEE
Q 021173          168 DEVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFH  245 (316)
Q Consensus       168 ~ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~  245 (316)
                      .+++...++|...+.||+|+||+||+|++.+.........||||+++.  .....++|.+|+.+|++++|+||++++++|
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            344445678999999999999999999986532211122489999874  334467799999999999999999999999


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSD---------------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQ  304 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~---------------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~  304 (316)
                      .+.  +..++||||+.+|+|.++|.....                     ...+++..++.|+.||+.||+|||+.   +
T Consensus        86 ~~~--~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~  160 (301)
T d1lufa_          86 AVG--KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---K  160 (301)
T ss_dssp             CSS--SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             ccC--CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---C
Confidence            874  889999999999999999975321                     22489999999999999999999994   7


Q ss_pred             cEEeccCCCCCC
Q 021173          305 VIFYYFEMIKTE  316 (316)
Q Consensus       305 IiHrDlKp~NI~  316 (316)
                      ||||||||+||+
T Consensus       161 ivHrDlKp~NIL  172 (301)
T d1lufa_         161 FVHRDLATRNCL  172 (301)
T ss_dssp             CCCSCCSGGGEE
T ss_pred             eEeeEEcccceE
Confidence            999999999984

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.7e-27  Score=210.50  Aligned_cols=130  Identities=22%  Similarity=0.287  Sum_probs=108.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||+||+|.+..++.     .||+|.+...   ....+++.+|+.+|++++|||||++++++.+.  +
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~--~   74 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE--N   74 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET--T
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCC-----EEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc--c
Confidence            578889999999999999999977664     3888888632   23356799999999999999999999999984  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+||||||+.+ ++.+++.... ...+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        75 ~~~iv~e~~~~-~~~~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl  134 (298)
T d1gz8a_          75 KLYLVFEFLHQ-DLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLL  134 (298)
T ss_dssp             EEEEEEECCSE-EHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             ceeEEEeecCC-chhhhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchhee
Confidence            99999999976 4555554432 33599999999999999999999995   6999999999984

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.2e-26  Score=209.05  Aligned_cols=129  Identities=21%  Similarity=0.368  Sum_probs=108.4

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEEEEE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~lV~  257 (316)
                      .++||+|+||+||+|++.+++.  ....||||.++.  .....++|.+|+++|++++|||||+++|+|.+. .+..++||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~-~~~~~lv~  108 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDG--KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-EGSPLVVL  108 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC------CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET-TTEEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCC--EEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec-CCceEEEE
Confidence            4789999999999999876532  123478888863  445567899999999999999999999998764 36799999


Q ss_pred             ecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          258 ERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       258 Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||++|+|.+++....  ..+++..++.|+.|++.||.|||+.   +|+||||||+||+
T Consensus       109 E~~~~g~l~~~~~~~~--~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NIL  162 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCM  162 (311)
T ss_dssp             ECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEeecCchhhhhcccc--ccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEe
Confidence            9999999999998764  3588999999999999999999994   7999999999984

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.4e-27  Score=208.97  Aligned_cols=132  Identities=21%  Similarity=0.281  Sum_probs=105.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|++.....  ....||||.+..    .....++|.+|+.+|++++|||||+++|+|.+   
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~--~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~---   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSG--KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTS--CEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCC--cEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee---
Confidence            457788999999999999998754332  123478888763    33445789999999999999999999999975   


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+||||||++|+|.+++....  ..+++..++.++.||+.||.|||++   +|+||||||+||+
T Consensus        83 ~~~~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIl  143 (273)
T d1u46a_          83 PPMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLL  143 (273)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             cchheeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhc
Confidence            56789999999999999887653  2599999999999999999999995   7999999999984

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7e-27  Score=211.50  Aligned_cols=129  Identities=17%  Similarity=0.257  Sum_probs=111.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC----chhhHhHHHHHHHHH-hCCCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS----SQGVKEFINDVNTLA-SLQHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~-~l~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||+||+|....++.     .||+|.+...    ....+.+..|+.++. .++|||||++++++.+. 
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~-----~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~-   75 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK-   75 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTE-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS-
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCC-----EEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccC-
Confidence            578889999999999999999988775     3889988632    233456777877765 68999999999999884 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+|||||||++|+|.++|....   .+++..+..++.||+.||+|||++   +||||||||+||+
T Consensus        76 -~~~yivmEy~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL  135 (320)
T d1xjda_          76 -ENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNIL  135 (320)
T ss_dssp             -SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEE
T ss_pred             -CceeEEEeecCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCccccee
Confidence             88999999999999999998754   489999999999999999999995   6999999999984

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.1e-27  Score=210.63  Aligned_cols=137  Identities=17%  Similarity=0.239  Sum_probs=112.9

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||.||+|++...........||||.++.  .......|.+|+.+++++ +|||||+++|+|.+.  +
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~--~  100 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG--G  100 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--S
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC--C
Confidence            56777899999999999999975422111123489999874  334556799999999999 699999999999874  7


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSD---------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~---------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .++||||||++|+|.++|+....               ...+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus       101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl  177 (311)
T d1t46a_         101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL  177 (311)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccc
Confidence            89999999999999999986431               22589999999999999999999995   6999999999984

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=7.8e-27  Score=213.71  Aligned_cols=129  Identities=12%  Similarity=0.103  Sum_probs=113.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC----CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP----SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS  250 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~  250 (316)
                      ++|...+.||+|+||.||+|.+..++.     .||+|.+..    .....+.+.+|+.+|+.++|||||++++++.+.  
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~-----~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--  113 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGN-----HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN--  113 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS--
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCC-----EEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccc--
Confidence            468888999999999999999987665     388888753    223346789999999999999999999999884  


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+++||||+.+|+|.+++....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus       114 ~~~~~v~e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NIL  173 (350)
T d1rdqe_         114 SNLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLL  173 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             cccccccccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcc
Confidence            88999999999999999998754   499999999999999999999995   7999999999984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=1.7e-26  Score=212.51  Aligned_cols=129  Identities=16%  Similarity=0.133  Sum_probs=108.5

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc----hhhHhHHH---HHHHHHhCCCCCcceeeeEEEc
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS----QGVKEFIN---DVNTLASLQHPNLCKLLGFHAR  247 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~---E~~~l~~l~HpnIv~l~g~~~~  247 (316)
                      ++|...++||+|+||.||+|++..++.     .||+|.+....    .....+.+   |+.+++.++|||||++++++.+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~-----~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~   78 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGK-----MYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT   78 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCC-----EEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE
Confidence            678889999999999999999987665     38888875211    12223444   4677778889999999999988


Q ss_pred             CCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          248 DGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       248 ~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +  +.+|||||||++|+|.++|....   .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        79 ~--~~~~ivmE~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NIL  139 (364)
T d1omwa3          79 P--DKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANIL  139 (364)
T ss_dssp             S--SEEEEEECCCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             C--CEEEEEEEecCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeE
Confidence            5  88999999999999999998754   589999999999999999999995   7999999999984

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.1e-26  Score=208.13  Aligned_cols=139  Identities=15%  Similarity=0.185  Sum_probs=112.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCCC
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASL-QHPNLCKLLGFHARDGS  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  250 (316)
                      -++|...+.||+|+||.||+|.+...........||||.+..  .....+.|.+|+.++.++ +|+|||.+++++..+ .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~-~   90 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-G   90 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-T
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC-C
Confidence            467888899999999999999986544322223489998863  334566788898888887 689999999998764 3


Q ss_pred             CeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 DQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 ~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +.+++|||||++|+|.++|+....             ...+++..++.|+.||+.||.|||++   +||||||||+||+
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NIL  166 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL  166 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCcccee
Confidence            678999999999999999976421             23489999999999999999999995   7999999999984

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.3e-26  Score=211.06  Aligned_cols=130  Identities=12%  Similarity=0.137  Sum_probs=108.5

Q ss_pred             hCCCCCc-ceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHh-CCCCCcceeeeEEEc--CC
Q 021173          174 CHNFFSD-RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLAS-LQHPNLCKLLGFHAR--DG  249 (316)
Q Consensus       174 t~~f~~~-~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~-l~HpnIv~l~g~~~~--~~  249 (316)
                      .++|... ++||+|+||+||+|.+..++.     .||+|.++.    ...+.+|+.++.+ ++|||||+++++|.+  ..
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~-----~vAiK~i~~----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~   80 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQE-----KFALKMLQD----CPKARREVELHWRASQCPHIVRIVDVYENLYAG   80 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCC-----EEEEEEEEC----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCC-----EEEEEEECC----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccC
Confidence            4578765 569999999999999977665     388998863    2457789998765 489999999999865  22


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ...+|||||||+||+|.++|..+. ...|++..+..|+.||+.||.|||+.   +|+||||||+||+
T Consensus        81 ~~~~~ivmEy~~gg~L~~~i~~~~-~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIl  143 (335)
T d2ozaa1          81 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLL  143 (335)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHSCS-CCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             CCEEEEEEECCCCCcHHHHHHhcC-CCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccc
Confidence            367899999999999999998754 34699999999999999999999995   7999999999984

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-26  Score=207.44  Aligned_cols=137  Identities=17%  Similarity=0.241  Sum_probs=108.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCc--eeEEEEEeeeecCCC--chhhHhHHHHHHHHHhC-CCCCcceeeeEEEcCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDAS--TSKKFEATVTRLNPS--SQGVKEFINDVNTLASL-QHPNLCKLLGFHARDG  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~--~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~  249 (316)
                      ++|...+.||+|+||.||+|+......  ......||||.++..  .....++.+|+..+.++ +|||||+++++|.++ 
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~-   91 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD-   91 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC-
Confidence            467777999999999999999765432  122345899998743  34557799999999888 799999999999885 


Q ss_pred             CCeEEEEEecCCCCCHHHHHhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 SDQRMLIYERLFHGSLDRLIYGRSD-------------GPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ~~~~~lV~Ey~~~GsL~~~L~~~~~-------------~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       +.+++|||||++|+|.++|..+..             ...+++.+++.|+.||+.||.|||++   +||||||||+||+
T Consensus        92 -~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL  167 (299)
T d1fgka_          92 -GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL  167 (299)
T ss_dssp             -SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             -CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence             789999999999999999986531             23589999999999999999999995   7999999999984

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=2.3e-26  Score=204.64  Aligned_cols=128  Identities=17%  Similarity=0.232  Sum_probs=110.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc---hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS---QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||+||+|++.++..      ||+|.+....   ...+.|.+|+.+|++++|||||++++++..+  +
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~------vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--~   73 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGET------FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--K   73 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCE------EEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS--S
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCE------EEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccC--C
Confidence            568888999999999999999976543      8999886432   2356799999999999999999999999985  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..+++|||+.++.+..+.....   .+++..+..|+.||+.||+|||+.   +||||||||+||+
T Consensus        74 ~~~i~~e~~~~~~~~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIl  132 (286)
T d1ob3a_          74 RLVLVFEHLDQDLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLL  132 (286)
T ss_dssp             CEEEEEECCSEEHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             ceeEEEEeehhhhHHHHHhhcC---CcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceee
Confidence            8999999998877776665543   599999999999999999999995   7999999999984

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-26  Score=207.69  Aligned_cols=131  Identities=18%  Similarity=0.217  Sum_probs=105.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC--Ce
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS--DQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~--~~  252 (316)
                      ++|...+.||+|+||.||+|++.+.       .||||.+.........+..|+..+..++|||||+++|+|.+++.  ..
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~-------~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~   75 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGE-------EVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTE-------EEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCE-------EEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceE
Confidence            4566778999999999999998643       38899886443332223445555567899999999999987532  36


Q ss_pred             EEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEG-----PFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~-----~~~IiHrDlKp~NI~  316 (316)
                      +|||||||.+|+|.++|+..    .++|..++.++.|++.||.|||+.+     ..+||||||||+||+
T Consensus        76 ~~lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NIL  140 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  140 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEE
T ss_pred             EEEEEecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceE
Confidence            89999999999999999875    3999999999999999999999731     147999999999984

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-26  Score=206.99  Aligned_cols=124  Identities=15%  Similarity=0.180  Sum_probs=103.2

Q ss_pred             cceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc------hhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeE
Q 021173          180 DRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS------QGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       180 ~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~  253 (316)
                      .++||+|+||+||+|.+..++.     .||||.+....      ...+.+.+|+.+|++++|||||++++++.++  +.+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~--~~~   75 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQ-----IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK--SNI   75 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCS-----EEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT--TCC
T ss_pred             ceEeccCcCeEEEEEEECCCCc-----EEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccC--Cce
Confidence            3789999999999999987665     38889886322      1235689999999999999999999999885  789


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      |||||||.++++..++....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        76 ~ivmE~~~~~~~~~~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIl  132 (299)
T d1ua2a_          76 SLVFDFMETDLEVIIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLL  132 (299)
T ss_dssp             EEEEECCSEEHHHHHTTCCS---SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             eehhhhhcchHHhhhhhccc---CCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEE
Confidence            99999999887776655432   589999999999999999999995   6999999999984

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3e-26  Score=206.28  Aligned_cols=137  Identities=15%  Similarity=0.257  Sum_probs=113.3

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCe
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQ  252 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  252 (316)
                      ++|...+.||+|+||.||+|.+...........||||+++.  .......|.+|+.++++++|+|||+++|+|..+  +.
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~   97 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG--QP   97 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS--SS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC--Cc
Confidence            56777799999999999999986432222234589999874  334455699999999999999999999999874  78


Q ss_pred             EEEEEecCCCCCHHHHHhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          253 RMLIYERLFHGSLDRLIYGRS-------DGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       253 ~~lV~Ey~~~GsL~~~L~~~~-------~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+||||||.+|+|.+++....       ....+++..++.|+.|++.||.|||++   +||||||||+||+
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiL  165 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM  165 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCcee
Confidence            999999999999999887431       113479999999999999999999995   7999999999984

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.92  E-value=5.2e-26  Score=206.20  Aligned_cols=126  Identities=15%  Similarity=0.170  Sum_probs=109.6

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-CCCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-HPNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||+||+|++..++.     .||+|.++..  ..+++.+|+.+|..+. |+||+++++++.......+
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~-----~vAiK~i~~~--~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNE-----KVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECSS--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCC-----EEEEEEECHH--HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence            578888999999999999999987665     3899988643  3467899999999995 9999999999986545779


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++|||||.+|+|..+..      .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus       108 ~~v~e~~~~~~L~~~~~------~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NIL  161 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVM  161 (328)
T ss_dssp             EEEEECCCSCBGGGTTT------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             eEEEeecCCCcHHHHhc------CCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceE
Confidence            99999999999976532      489999999999999999999995   6999999999984

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-25  Score=200.19  Aligned_cols=129  Identities=15%  Similarity=0.163  Sum_probs=112.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCC
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSD  251 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  251 (316)
                      ++|...+.||+|+||+||+|++..++.     .||||.++.   ......++.+|+.+|+.++|+||++++++|.+.  +
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~--~   74 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHE-----IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--K   74 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--S
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCc-----EEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc--c
Confidence            468888999999999999999987665     378888752   234467899999999999999999999999884  8


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..++|||++.+++|..++....   .+++..+..++.|++.||+|||++   +||||||||+||+
T Consensus        75 ~~~iv~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIl  133 (292)
T d1unla_          75 KLTLVFEFCDQDLKKYFDSCNG---DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLL  133 (292)
T ss_dssp             EEEEEEECCSEEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred             ceeEEeeecccccccccccccc---ccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccc
Confidence            8999999999999988887654   589999999999999999999995   7999999999984

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.4e-26  Score=208.09  Aligned_cols=130  Identities=11%  Similarity=0.081  Sum_probs=103.7

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcC----CCC
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARD----GSD  251 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~----~~~  251 (316)
                      +|...++||+|+||+||+|++..++.     .||||.+....   ..+.+|+.+|++++|+|||+++++|...    +..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~-----~vAiK~i~~~~---~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEECCS---SSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCC-----EEEEEEECccc---hHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCce
Confidence            46667899999999999999987665     38888886433   2345899999999999999999998652    134


Q ss_pred             eEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          252 QRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       252 ~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +++||||||.+|.+..+.........+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NIL  154 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLL  154 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEE
Confidence            6899999998764444433222234699999999999999999999995   7999999999984

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.8e-26  Score=200.93  Aligned_cols=129  Identities=14%  Similarity=0.117  Sum_probs=109.4

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------hhhHhHHHHHHHHHhCC--CCCcceeeeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------QGVKEFINDVNTLASLQ--HPNLCKLLGFH  245 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~--HpnIv~l~g~~  245 (316)
                      ++|...++||+|+||.||+|++..++.     .||+|.+....       ....++.+|+.+|++++  |+|||++++++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~   78 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNL-----PVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF   78 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCC-----EEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCC-----EEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEE
Confidence            568888999999999999999987665     37888775211       12345789999999996  89999999999


Q ss_pred             EcCCCCeEEEEEecCCC-CCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFH-GSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~-GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.  +..++||||+.+ +++.+++....   .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        79 ~~~--~~~~lv~e~~~~~~~l~~~~~~~~---~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIl  142 (273)
T d1xwsa_          79 ERP--DSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENIL  142 (273)
T ss_dssp             ECS--SEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred             eeC--CeEEEEEEeccCcchHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceE
Confidence            884  899999999986 68888887654   599999999999999999999995   7999999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-25  Score=205.06  Aligned_cols=131  Identities=11%  Similarity=0.180  Sum_probs=106.0

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGS-  250 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~-  250 (316)
                      +..|...+.||+|+||+||+|.+..++.     .||||.+..  .....+.+++|+++|+.++|+||+++++++..+.. 
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~   81 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKV-----RVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE   81 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCS-----EEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCc-----EEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecccc
Confidence            3568888999999999999999876665     389998864  33445679999999999999999999999876321 


Q ss_pred             -CeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          251 -DQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       251 -~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                       ...+++++|+.+|+|.+++...    .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        82 ~~~~~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NIL  141 (345)
T d1pmea_          82 QMKDVYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLL  141 (345)
T ss_dssp             TCCCEEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             ccceEEEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEE
Confidence             2234455667799999999765    399999999999999999999995   7999999999984

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.8e-25  Score=202.87  Aligned_cols=130  Identities=15%  Similarity=0.172  Sum_probs=104.7

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .+.|...+.||+|+||+||+|.+..++.     .||||.+..   .....+.+.+|+.+|+.++|+|||+++++|...+ 
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~   91 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGA-----KVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET   91 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCC-----EEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcc
Confidence            4678888999999999999999987665     389998863   3344567899999999999999999999997642 


Q ss_pred             ---CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 ---SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 ---~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                         ...+||||||| +++|..++...    .+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        92 ~~~~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL  153 (346)
T d1cm8a_          92 LDDFTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLA  153 (346)
T ss_dssp             TTTCCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             ccccceEEEEEecc-cccHHHHHHhc----cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhh
Confidence               23579999999 66888887654    499999999999999999999995   6999999999984

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-25  Score=202.67  Aligned_cols=131  Identities=12%  Similarity=0.156  Sum_probs=110.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC---chhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS---SQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||+||+|++..++.     .||||.+...   ....+++.+|+.+|+.++|+|||++++++.... 
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~   91 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGL-----RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARS   91 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTE-----EEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccc
Confidence            5678889999999999999999987664     3899998743   334567899999999999999999999986421 


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ....++||||+.+|+|.+++...    .+++..+..|+.||+.||+|||++   +||||||||+||+
T Consensus        92 ~~~~~~~~i~~~~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NIL  153 (348)
T d2gfsa1          92 LEEFNDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLA  153 (348)
T ss_dssp             TTTCCCCEEEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             cccCceEEEEEeecCCchhhhcccc----cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCcccc
Confidence              13456667788899999999754    499999999999999999999995   6999999999984

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2e-24  Score=194.76  Aligned_cols=132  Identities=11%  Similarity=0.152  Sum_probs=106.5

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC-
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG-  249 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-  249 (316)
                      .++|...+.||+|+||+||+|++..++.     .||||.+..   ......++.+|+.+|++++|+||+++++++.... 
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~-----~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~   83 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQ-----KVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKAS   83 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCC-----EEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCC-----EEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccc
Confidence            3678888999999999999999976654     388998753   2234567899999999999999999999986521 


Q ss_pred             -----CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 -----SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 -----~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                           .+.+|+|||||.++.+..+....   ..+++..+..|+.||+.||.|||++   +||||||||+||+
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~~---~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NIL  149 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVL  149 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             cccccCceEEEEEeccCCCccchhhhcc---cccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchhee
Confidence                 25689999999887666554433   2589999999999999999999995   7999999999984

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.3e-24  Score=193.10  Aligned_cols=133  Identities=18%  Similarity=0.207  Sum_probs=104.9

Q ss_pred             hCCCCCcceeeecCceEEEEEEECCC-CceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhC---CCCCcceeeeEEE
Q 021173          174 CHNFFSDRCISEGLSSVMYRASFGDD-ASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASL---QHPNLCKLLGFHA  246 (316)
Q Consensus       174 t~~f~~~~~IG~G~fg~Vy~~~~~~~-~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l---~HpnIv~l~g~~~  246 (316)
                      .++|...+.||+|+||+||+|.+..+ +.     .||||.+..   .......+.+|+.+|+.|   +||||++++++|.
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~-----~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~   80 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGR-----FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCT   80 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTE-----EEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCE-----EEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeec
Confidence            46798999999999999999998644 33     267777642   222344577888887766   7999999999986


Q ss_pred             cC---CCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          247 RD---GSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       247 ~~---~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ..   ....++++||||.+|++.......  ...+++..+..|+.|++.||+|||++   +||||||||+||+
T Consensus        81 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NIL  148 (305)
T d1blxa_          81 VSRTDRETKLTLVFEHVDQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNIL  148 (305)
T ss_dssp             EEECSSEEEEEEEEECCSCBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             ccccccCceEEEEEEeccCCchhhhhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEE
Confidence            42   135789999999987776555443  23589999999999999999999995   6999999999984

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2.1e-24  Score=197.73  Aligned_cols=128  Identities=14%  Similarity=0.163  Sum_probs=106.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCC---CchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCC--
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP---SSQGVKEFINDVNTLASLQHPNLCKLLGFHARDG--  249 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~--  249 (316)
                      +.|...+.||+|+||+||+|.+..++.     .||||++..   ......++.+|+.+|++++|||||+++++|...+  
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~-----~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~   91 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDR-----NVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTL   91 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTE-----EEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCST
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCC-----EEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccc
Confidence            568888999999999999999987665     389998863   2344567899999999999999999999997532  


Q ss_pred             --CCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          250 --SDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       250 --~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                        ...+|+|||||.+ +|.+.+..     .+++..+..++.||+.||.|||+.   +|+||||||+||+
T Consensus        92 ~~~~~~~iv~Ey~~~-~l~~~~~~-----~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil  151 (355)
T d2b1pa1          92 EEFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIV  151 (355)
T ss_dssp             TTCCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred             ccCceeEEEEeccch-HHHHhhhc-----CCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccc
Confidence              3789999999976 45555543     389999999999999999999995   6999999999984

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=6e-24  Score=190.00  Aligned_cols=129  Identities=13%  Similarity=0.075  Sum_probs=105.0

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCcceeeeEEEcCCCCeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNLCKLLGFHARDGSDQRM  254 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~~~  254 (316)
                      +.|...+.||+|+||.||+|++..++.     .||||.+... ....++..|+++++.++|+|+|.+++++..+ .+..+
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~-----~vAvK~~~~~-~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~-~~~~~   79 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGE-----EVAIKLECVK-TKHPQLHIESKIYKMMQGGVGIPTIRWCGAE-GDYNV   79 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTE-----EEEEEEEESC-TTSCCHHHHHHHHHHSTTSTTCCCEEEEEEE-TTEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCC-----EEEEEEEchh-ccCHHHHHHHHHHHHccCCCcccEEEEEEec-CCEEE
Confidence            468889999999999999999987664     3888876532 3345688999999999988777666665544 47899


Q ss_pred             EEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          255 LIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       255 lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +||||+ +|+|.+.+....  ..+++..++.++.|++.||+|||++   +||||||||+||+
T Consensus        80 ivme~~-~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl  135 (299)
T d1ckia_          80 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFL  135 (299)
T ss_dssp             EEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred             EEEEEc-CCchhhhhhhcc--CCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhcc
Confidence            999999 557766666543  2599999999999999999999995   6999999999983

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.89  E-value=1e-23  Score=188.16  Aligned_cols=128  Identities=13%  Similarity=0.110  Sum_probs=109.2

Q ss_pred             CCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCC-CCcceeeeEEEcCCCCeE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQH-PNLCKLLGFHARDGSDQR  253 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~~~~~~  253 (316)
                      ++|...+.||+|+||+||+|++..++.     .||+|.+... .....+.+|++++..|.| +|++.+++++.+.  ...
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~-----~vAvK~~~~~-~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~--~~~   76 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQ-----QVAIKFEPRR-SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG--LHN   76 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTE-----EEEEEEEECC-TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEET--TEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCC-----EEEEEEEccc-cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecC--Ccc
Confidence            578889999999999999999987664     3888877532 334568899999999975 8999999998874  889


Q ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          254 MLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       254 ~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      ++||||+ +|+|.+++....  ..+++.+++.|+.|++.||+|||+.   +||||||||+||+
T Consensus        77 ~~vme~~-~~~l~~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nil  133 (293)
T d1csna_          77 VLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFL  133 (293)
T ss_dssp             EEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEE
T ss_pred             EEEEEec-CCCHHHHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCcccee
Confidence            9999999 689999987753  3599999999999999999999995   7999999999984

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.8e-24  Score=192.88  Aligned_cols=129  Identities=13%  Similarity=0.098  Sum_probs=109.7

Q ss_pred             CCCCCcceeeecCceEEEEEEECC---CCceeEEEEEeeeecCC-----CchhhHhHHHHHHHHHhCCC-CCcceeeeEE
Q 021173          175 HNFFSDRCISEGLSSVMYRASFGD---DASTSKKFEATVTRLNP-----SSQGVKEFINDVNTLASLQH-PNLCKLLGFH  245 (316)
Q Consensus       175 ~~f~~~~~IG~G~fg~Vy~~~~~~---~~~~~~~~~vavK~~~~-----~~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~  245 (316)
                      ++|...+.||+|+||+||+|....   ++.     .||+|.++.     .....+.+.+|+.+|++++| +||+++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~-----~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~   98 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGK-----LYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF   98 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTC-----EEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCc-----EEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeee
Confidence            568888999999999999998743   333     278887753     22345678999999999966 8999999999


Q ss_pred             EcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          246 ARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       246 ~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      .+.  +.+++||||+.+|+|.+++....   .+.+..+..++.||+.||.|||+.   +||||||||+||+
T Consensus        99 ~~~--~~~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nil  161 (322)
T d1vzoa_          99 QTE--TKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENIL  161 (322)
T ss_dssp             EET--TEEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred             ccC--CceeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCcccee
Confidence            884  89999999999999999998754   478899999999999999999994   7999999999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=2.5e-21  Score=176.91  Aligned_cols=134  Identities=12%  Similarity=0.085  Sum_probs=106.4

Q ss_pred             CCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC-----------CCCcceeeeE
Q 021173          176 NFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ-----------HPNLCKLLGF  244 (316)
Q Consensus       176 ~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-----------HpnIv~l~g~  244 (316)
                      .|...+.||+|+||+||+|++..++.     .||||.++......+.+.+|+.+++.++           |+||++++++
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~-----~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~   88 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNT-----HVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   88 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTE-----EEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCC-----EEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence            37888999999999999999987664     3899999876666678889999998875           4789999998


Q ss_pred             EEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          245 HARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       245 ~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +...+....+++|+++..+..............+++..+..++.||+.||+|||+.  .+|+||||||+||+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIl  158 (362)
T d1q8ya_          89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVL  158 (362)
T ss_dssp             EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEE
T ss_pred             eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHee
Confidence            87654567777777776554333322222244689999999999999999999984  36999999999984

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.76  E-value=4.7e-19  Score=147.64  Aligned_cols=114  Identities=11%  Similarity=0.085  Sum_probs=86.2

Q ss_pred             CCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCCc-------------------hhhHhHHHHHHHHHhCCCCCc
Q 021173          178 FSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPSS-------------------QGVKEFINDVNTLASLQHPNL  238 (316)
Q Consensus       178 ~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------------------~~~~~~~~E~~~l~~l~HpnI  238 (316)
                      ..++.||+|+||.||+|.+.++..      ||||.+....                   .....+.+|...+.++.|.++
T Consensus         3 ~vg~~IG~G~~g~Vy~a~~~~g~~------vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v   76 (191)
T d1zara2           3 AIGKLMGEGKESAVFNCYSEKFGE------CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAV   76 (191)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTEE------EEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred             hhCCEeeeCcceEEEEEECCCCCE------EEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCc
Confidence            346899999999999999876543      7777654210                   011234578889999999999


Q ss_pred             ceeeeEEEcCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEeccCCCCCC
Q 021173          239 CKLLGFHARDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHEEGPFQVIFYYFEMIKTE  316 (316)
Q Consensus       239 v~l~g~~~~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~~~~~~IiHrDlKp~NI~  316 (316)
                      +..+++.      ..+|+|||+.++.+.+          +++.....++.|++.||.|||++   +|+||||||+||+
T Consensus        77 ~~~~~~~------~~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NIL  135 (191)
T d1zara2          77 PKVYAWE------GNAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL  135 (191)
T ss_dssp             CCEEEEE------TTEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred             ceEEEec------CCEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhhee
Confidence            9887653      1379999998865532          33444567899999999999995   6999999999984

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.82  E-value=2.4e-05  Score=65.80  Aligned_cols=114  Identities=11%  Similarity=0.045  Sum_probs=71.3

Q ss_pred             HHHHHhCCCCCcceeeecCceEEEEEEECCCCceeEEEEEeeeecCCC-chhhHhHHHHHHHHHhCC-CCCcceeeeEEE
Q 021173          169 EVAAACHNFFSDRCISEGLSSVMYRASFGDDASTSKKFEATVTRLNPS-SQGVKEFINDVNTLASLQ-HPNLCKLLGFHA  246 (316)
Q Consensus       169 ei~~~t~~f~~~~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~-HpnIv~l~g~~~  246 (316)
                      |+......|...+..+-++.+.||+....++.       +.+|+.... ......+.+|..++..+. +--+.+++.++.
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~-------~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~   80 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENEN-------LYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER   80 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECSSCE-------EEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeCCCe-------EEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEe
Confidence            45555566655544444445789988754443       556665422 223445788999888775 444667777776


Q ss_pred             cCCCCeEEEEEecCCCCCHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 021173          247 RDGSDQRMLIYERLFHGSLDRLIYGRSDGPPIDWNTRVKIALCAAQGLTFLHE  299 (316)
Q Consensus       247 ~~~~~~~~lV~Ey~~~GsL~~~L~~~~~~~~l~~~~~~~ia~qia~gL~yLH~  299 (316)
                      ++  +..++||++++|..+.+.....     ..   ...++.+++..|..||+
T Consensus        81 ~~--~~~~lv~~~l~G~~~~~~~~~~-----~~---~~~~~~~l~~~l~~lH~  123 (263)
T d1j7la_          81 HD--GWSNLLMSEADGVLCSEEYEDE-----QS---PEKIIELYAECIRLFHS  123 (263)
T ss_dssp             ET--TEEEEEEECCSSEEHHHHTTTC-----SC---HHHHHHHHHHHHHHHHT
T ss_pred             cC--CceEEEEEeccccccccccccc-----cc---HHHHHHHHHHHHHHHhc
Confidence            63  7889999999998886654322     11   22345566666777774

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.55  E-value=0.0011  Score=54.89  Aligned_cols=74  Identities=15%  Similarity=0.127  Sum_probs=48.7

Q ss_pred             eeeecCc-eEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC--CCCcceeeeEEEcCCCCeEEEEEe
Q 021173          182 CISEGLS-SVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ--HPNLCKLLGFHARDGSDQRMLIYE  258 (316)
Q Consensus       182 ~IG~G~f-g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~--HpnIv~l~g~~~~~~~~~~~lV~E  258 (316)
                      .+..|.. +.||+....++..      +.+|.....  ....+..|+.+|+.+.  .-.+.+++++..+.  +..++||+
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~------~vlK~~~~~--~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~--~~~~~v~~   86 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPV------LFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEA--GRDWLLLG   86 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCC------EEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--SCEEEEEE
T ss_pred             EcCCcccCCeEEEEEeCCCCE------EEEEeCCcc--CHhHHHHHHHHHHHHHhcCCCCCceeeecccc--cceEEEEE
Confidence            4445543 6789988766654      555654422  2345778888888774  33356677776663  77899999


Q ss_pred             cCCCCCH
Q 021173          259 RLFHGSL  265 (316)
Q Consensus       259 y~~~GsL  265 (316)
                      |++|.++
T Consensus        87 ~i~G~~~   93 (255)
T d1nd4a_          87 EVPGQDL   93 (255)
T ss_dssp             CCSSEET
T ss_pred             eeecccc
Confidence            9987654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=94.91  E-value=0.021  Score=50.42  Aligned_cols=75  Identities=11%  Similarity=0.103  Sum_probs=44.4

Q ss_pred             ceeeecCceEEEEEEECCCCceeEEEEEeeeecCC--------CchhhHhHHHHHHHHHhCC-C--CCcceeeeEEEcCC
Q 021173          181 RCISEGLSSVMYRASFGDDASTSKKFEATVTRLNP--------SSQGVKEFINDVNTLASLQ-H--PNLCKLLGFHARDG  249 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~--------~~~~~~~~~~E~~~l~~l~-H--pnIv~l~g~~~~~~  249 (316)
                      +.||.|....||+....+++..     +.+|.-..        ......+...|.+.|..+. +  ..+.+++.+..   
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~s-----vivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d~---  103 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRA-----LIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT---  103 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CE-----EEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET---
T ss_pred             EEeCCCceEeEEEEEeCCCCeE-----EEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEcC---
Confidence            5789999999999987665431     44453221        1112334556888887663 2  34556665532   


Q ss_pred             CCeEEEEEecCCCCC
Q 021173          250 SDQRMLIYERLFHGS  264 (316)
Q Consensus       250 ~~~~~lV~Ey~~~Gs  264 (316)
                       +..++||||+.+..
T Consensus       104 -~~~~lvmE~L~~~~  117 (392)
T d2pula1         104 -EMAVTVMEDLSHLK  117 (392)
T ss_dssp             -TTTEEEECCCTTSE
T ss_pred             -CCCEEEEeccCCcc
Confidence             45679999997643

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=90.04  E-value=0.14  Score=44.84  Aligned_cols=77  Identities=12%  Similarity=0.153  Sum_probs=45.3

Q ss_pred             ceeeecCceEEEEEEECCCCceeE--EEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCc-ceeeeEEEcCCCCeEEEEE
Q 021173          181 RCISEGLSSVMYRASFGDDASTSK--KFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL-CKLLGFHARDGSDQRMLIY  257 (316)
Q Consensus       181 ~~IG~G~fg~Vy~~~~~~~~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~g~~~~~~~~~~~lV~  257 (316)
                      +.|+.|-.-.+|++...++....+  ...+.++... .........+|..+++.+.-.+| .++++++..      .+||
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~------g~I~  120 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETESHLVAESVIFTLLSERHLGPKLYGIFSG------GRLE  120 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT------EEEE
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-CcchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC------ceEE
Confidence            567778888999998765432100  0012233222 22223345688888888853344 467776632      5899


Q ss_pred             ecCCCCC
Q 021173          258 ERLFHGS  264 (316)
Q Consensus       258 Ey~~~Gs  264 (316)
                      ||++|..
T Consensus       121 efi~g~~  127 (395)
T d1nw1a_         121 EYIPSRP  127 (395)
T ss_dssp             CCCCEEE
T ss_pred             EEecccc
Confidence            9998743

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=90.00  E-value=0.33  Score=41.03  Aligned_cols=67  Identities=7%  Similarity=0.083  Sum_probs=42.4

Q ss_pred             eEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCCCCCc--ceeee-----EEEcCCCCeEEEEEecCC
Q 021173          189 SVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQHPNL--CKLLG-----FHARDGSDQRMLIYERLF  261 (316)
Q Consensus       189 g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~HpnI--v~l~g-----~~~~~~~~~~~lV~Ey~~  261 (316)
                      -.||++...++..      +++|.-.......+++..|...+..|....|  +..+.     .+..  .+..+.+++|+.
T Consensus        36 N~vy~v~~~dg~~------~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~--~~~~~~l~~~~~  107 (325)
T d1zyla1          36 NRVYQFQDEDRRR------FVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNH--QGFYFAVFPSVG  107 (325)
T ss_dssp             SEEEEECCTTCCC------EEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEE--TTEEEEEEECCC
T ss_pred             ceeEEEEcCCCCE------EEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeee--eeEEEEEEeecC
Confidence            5799999887764      6677766544456678888888887742222  11111     1111  366788999997


Q ss_pred             CC
Q 021173          262 HG  263 (316)
Q Consensus       262 ~G  263 (316)
                      |.
T Consensus       108 G~  109 (325)
T d1zyla1         108 GR  109 (325)
T ss_dssp             CE
T ss_pred             Cc
Confidence            63

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=85.36  E-value=1  Score=37.33  Aligned_cols=62  Identities=13%  Similarity=0.089  Sum_probs=37.4

Q ss_pred             cCHHHHHHHhCCCCCcceee-----ecCceEEEEEEECCCCceeEEEEEeeeecCCCchhhHhHHHHHHHHHhCC
Q 021173          165 FPLDEVAAACHNFFSDRCIS-----EGLSSVMYRASFGDDASTSKKFEATVTRLNPSSQGVKEFINDVNTLASLQ  234 (316)
Q Consensus       165 ~~~~ei~~~t~~f~~~~~IG-----~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~  234 (316)
                      ++.+|+.....+|..++...     .|---+.|+....++.       +.+|..... ....++..|+.++..|.
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-------yVLri~~~~-~~~~~l~~~~~~l~~L~   69 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-------LILTLYEKR-VEKNDLPFFLGLMQHLA   69 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-------EEEEEECC----CCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-------EEEEEcCCC-CCHHHHHHHHHHHHhhh
Confidence            56788888888898765543     4445678998877664       566665432 22334455666666663