Your job contains 1 sequence.
>021174
MSKANVRRHILEKNRSPKEKEPKPTQSLLSKHLKKVYPIGLHRSSSSLSLSSLSLSLSQN
SNDSSVTDNSNSPLEQRISLALRLITPPERREVTVAKNAQPQQQQQQQQQQSQDSCCGEL
KRCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAF
GGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYV
NFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCF
RYSECVSLAERPWRHI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021174
(316 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1006230719 - symbol:AT1G13635 species:3702 "Ar... 988 1.5e-99 1
TAIR|locus:2174373 - symbol:AT5G57970 species:3702 "Arabi... 568 4.8e-55 1
TAIR|locus:2037268 - symbol:AT1G75090 species:3702 "Arabi... 566 7.8e-55 1
TAIR|locus:2025697 - symbol:AT1G80850 species:3702 "Arabi... 549 4.9e-53 1
TAIR|locus:2200447 - symbol:AT1G15970 species:3702 "Arabi... 544 1.7e-52 1
TAIR|locus:2156329 - symbol:AT5G44680 species:3702 "Arabi... 499 1.4e-50 2
TAIR|locus:2087710 - symbol:AT3G12710 species:3702 "Arabi... 474 4.4e-45 1
TIGR_CMR|CBU_0383 - symbol:CBU_0383 "DNA-3-methyladenine ... 410 2.6e-38 1
TIGR_CMR|GSU_0567 - symbol:GSU_0567 "DNA-3-methyladenine ... 410 2.6e-38 1
TIGR_CMR|SO_0016 - symbol:SO_0016 "DNA-3-methyladenine gl... 393 1.7e-36 1
TIGR_CMR|CPS_2351 - symbol:CPS_2351 "DNA-3-methyladenine ... 378 6.5e-35 1
UNIPROTKB|Q0C3V6 - symbol:tag "DNA-3-methyladenine glycos... 366 1.2e-33 1
UNIPROTKB|P05100 - symbol:tag "3-methyl-adenine DNA glyco... 357 1.1e-32 1
UNIPROTKB|Q9KRH0 - symbol:VC1672 "DNA-3-methyladenine gly... 330 7.9e-30 1
TIGR_CMR|VC_1672 - symbol:VC_1672 "DNA-3-methyladenine gl... 330 7.9e-30 1
TIGR_CMR|SPO_1900 - symbol:SPO_1900 "DNA-3-methyladenine ... 294 5.2e-26 1
DICTYBASE|DDB_G0271050 - symbol:magA "methyladenine glyco... 286 3.6e-25 1
UNIPROTKB|Q0C5T4 - symbol:HNE_0175 "Putative uncharacteri... 109 0.00059 1
>TAIR|locus:1006230719 [details] [associations]
symbol:AT1G13635 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 IPI:IPI00521326 RefSeq:NP_001184988.1
RefSeq:NP_973818.1 UniGene:At.19663 ProteinModelPortal:F4HSJ2
SMR:F4HSJ2 EnsemblPlants:AT1G13635.1 EnsemblPlants:AT1G13635.2
GeneID:2745751 KEGG:ath:AT1G13635 OMA:HNWTEIL Uniprot:F4HSJ2
Length = 311
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 195/318 (61%), Positives = 230/318 (72%)
Query: 1 MSKANVRR-HILEKNRSPKEKEPKPTQSLLSKHLKKVYPIGLHRXXXXXXXXXXXXXXXX 59
M KA+ +R I+EK++S +EKE K + +KHLK++YPI L R
Sbjct: 1 MYKASPKRKEIVEKSKSVREKEIKQNSNFFAKHLKRIYPITLQRSTSSSFSLSSISLSLS 60
Query: 60 XXXXXXXXXXXXXPLEQRISLALRLITPPERREVTVAKNAXXXXXXXXXXXXXXDSCCGE 119
LEQ+ISLAL LI+ P RRE+ V K+ E
Sbjct: 61 QNSTDSVSTDSNSTLEQKISLALGLISSPHRREIFVPKSIPQQLCQDFNSSD-------E 113
Query: 120 LKRCNWITK-NNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFRE 178
KRCNWITK +++VYV FHD+ WGVPVYDDN LFE LA+SGMLMDYNWTEILKRKE FRE
Sbjct: 114 PKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHFRE 173
Query: 179 AFGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWG 238
AF FDP VAKMGEKEI EI+SN AIML E RVRCIVDNAKCI K++NEFGSFSSF+WG
Sbjct: 174 AFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFVWG 233
Query: 239 YVNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVD 298
++++KP+INKF+Y RNVPLRSPKAE IS+D++KRGFR VGPVIV+SFMQAAGLTIDHLVD
Sbjct: 234 FMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDHLVD 293
Query: 299 CFRYSECVSLAERPWRHI 316
CFR+ +CVSLAERPWRHI
Sbjct: 294 CFRHGDCVSLAERPWRHI 311
>TAIR|locus:2174373 [details] [associations]
symbol:AT5G57970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB013396
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT003075 EMBL:AK227342
IPI:IPI00522860 RefSeq:NP_001032091.1 RefSeq:NP_200605.1
UniGene:At.29303 UniGene:At.66976 ProteinModelPortal:Q9FJL9
SMR:Q9FJL9 PaxDb:Q9FJL9 PRIDE:Q9FJL9 EnsemblPlants:AT5G57970.1
EnsemblPlants:AT5G57970.2 GeneID:835908 KEGG:ath:AT5G57970
TAIR:At5g57970 InParanoid:Q9FJL9 OMA:VSMLERE PhylomeDB:Q9FJL9
ProtClustDB:CLSN2716844 Genevestigator:Q9FJL9 Uniprot:Q9FJL9
Length = 347
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 96/192 (50%), Positives = 140/192 (72%)
Query: 121 KRCNWITKNNK-VYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 179
KRC W+T N+ Y+ FHDE WGVPV+DD +LFELL LSG L ++ W IL +++ FRE
Sbjct: 154 KRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREV 213
Query: 180 FGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGY 239
F FDP ++ K+ EK+I+ S + +L++ ++R +++NA+ I+K++ E+GSF ++W +
Sbjct: 214 FADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSF 273
Query: 240 VNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDC 299
V K +++KFRY R VP ++PKAE IS+DL++RGFR VGP +VYSFMQAAG+T DHL C
Sbjct: 274 VKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSC 333
Query: 300 FRYSECVSLAER 311
FR+ C+ ER
Sbjct: 334 FRFHHCIFEHER 345
>TAIR|locus:2037268 [details] [associations]
symbol:AT1G75090 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 UniGene:At.17945
EMBL:AY034999 EMBL:AY063008 IPI:IPI00546123 RefSeq:NP_565100.1
HSSP:P05100 ProteinModelPortal:Q94CA9 SMR:Q94CA9
EnsemblPlants:AT1G75090.1 GeneID:843846 KEGG:ath:AT1G75090
TAIR:At1g75090 HOGENOM:HOG000220754 InParanoid:Q94CA9 OMA:RETKSHE
PhylomeDB:Q94CA9 ProtClustDB:CLSN2722806 ArrayExpress:Q94CA9
Genevestigator:Q94CA9 Uniprot:Q94CA9
Length = 329
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 100/195 (51%), Positives = 143/195 (73%)
Query: 118 GELKRCNWITKNNK-VYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELF 176
G +KRC+WIT N+ +YV FHDE WGVPV DD +LFELL S L +++W IL+R++ F
Sbjct: 116 GPVKRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDF 175
Query: 177 REAFGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFM 236
R+ F FDP ++A+ EK ++ + N ++L+E ++R IV+NAK ++K+ EFGSFS++
Sbjct: 176 RKLFEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYC 235
Query: 237 WGYVNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHL 296
W +VN KP+ N +RY R VP++SPKAE IS+D+++RGFR VGP ++YSF+QA+G+ DHL
Sbjct: 236 WRFVNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHL 295
Query: 297 VDCFRYSECVSLAER 311
CFRY EC ER
Sbjct: 296 TACFRYQECNVETER 310
>TAIR|locus:2025697 [details] [associations]
symbol:AT1G80850 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC011713
UniGene:At.28188 HSSP:P05100 HOGENOM:HOG000220754
ProtClustDB:CLSN2679529 EMBL:BT033081 IPI:IPI00524875 PIR:B96841
RefSeq:NP_178200.1 UniGene:At.50058 ProteinModelPortal:Q9SAH6
SMR:Q9SAH6 EnsemblPlants:AT1G80850.1 GeneID:844424
KEGG:ath:AT1G80850 TAIR:At1g80850 InParanoid:Q9SAH6 OMA:ENARQIC
PhylomeDB:Q9SAH6 Genevestigator:Q9SAH6 Uniprot:Q9SAH6
Length = 327
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 104/225 (46%), Positives = 154/225 (68%)
Query: 90 RREVTVAKNAXXXXXXXXXXXXXXDSC-CGELKRCNWIT-KNNKVYVAFHDECWGVPVYD 147
RR +V+ ++ C C KRC WIT K+++ Y+AFHDE WGVPV+D
Sbjct: 102 RRSGSVSSSSSLRRNLTEERDEKASDCFCDGRKRCAWITPKSDQCYIAFHDEEWGVPVHD 161
Query: 148 DNQLFELLALSGMLMDYNWTEILKRKELFREAFGGFDPKSVAKMGEKEIL--EISSNTAI 205
D +LFELL+LSG L + +W +IL +++LFRE F FDP +++++ K+I EI++ T
Sbjct: 162 DKRLFELLSLSGALAELSWKDILSKRQLFREVFMDFDPIAISELTNKKITSPEIAATT-- 219
Query: 206 MLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVNFKPMINKFRYPRNVPLRSPKAEAI 265
+L+E ++R I++NA + KI+ FGSF ++W +VN KP ++FRYPR VP+++ KAE I
Sbjct: 220 LLSEQKLRSILENANQVCKIIGAFGSFDKYIWNFVNQKPTQSQFRYPRQVPVKTSKAELI 279
Query: 266 SRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFRYSECVSLAE 310
S+DL++RGFR V P ++YSFMQ AGLT DHL CFR+ +C++ E
Sbjct: 280 SKDLVRRGFRSVSPTVIYSFMQTAGLTNDHLTCCFRHHDCMTKDE 324
>TAIR|locus:2200447 [details] [associations]
symbol:AT1G15970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC010924
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT029471 EMBL:AK229092
IPI:IPI00536280 PIR:C86294 RefSeq:NP_173049.1 UniGene:At.43545
ProteinModelPortal:Q9S9N7 SMR:Q9S9N7 PaxDb:Q9S9N7 PRIDE:Q9S9N7
EnsemblPlants:AT1G15970.1 GeneID:838167 KEGG:ath:AT1G15970
TAIR:At1g15970 InParanoid:Q9S9N7 OMA:EREFRSV PhylomeDB:Q9S9N7
ProtClustDB:CLSN2679529 Genevestigator:Q9S9N7 Uniprot:Q9S9N7
Length = 352
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 100/191 (52%), Positives = 138/191 (72%)
Query: 121 KRCNWIT-KNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 179
KRC WIT K + YVAFHDE WGVPV+DD +LFELL LSG L + +WT+IL R+ + RE
Sbjct: 145 KRCAWITPKADPCYVAFHDEEWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREV 204
Query: 180 FGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGY 239
F FDP +VA++ +K++ + +L+E ++R I+DN++ + KI+ E GS +MW +
Sbjct: 205 FMDFDPVAVAELNDKKLTAPGTAAISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMWNF 264
Query: 240 VNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDC 299
VN KP ++FRY R VP+++ KAE IS+DL++RGFR V P ++YSFMQAAGLT DHL+ C
Sbjct: 265 VNNKPTQSQFRYQRQVPVKTSKAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLIGC 324
Query: 300 FRYSECVSLAE 310
FRY +C AE
Sbjct: 325 FRYQDCCVDAE 335
>TAIR|locus:2156329 [details] [associations]
symbol:AT5G44680 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:AB016874 HSSP:P05100 EMBL:BT003900 EMBL:BT004932
IPI:IPI00531451 RefSeq:NP_199281.1 UniGene:At.23434
ProteinModelPortal:Q9FIZ5 SMR:Q9FIZ5 EnsemblPlants:AT5G44680.1
GeneID:834497 KEGG:ath:AT5G44680 TAIR:At5g44680 InParanoid:Q9FIZ5
OMA:NTFREAF PhylomeDB:Q9FIZ5 ProtClustDB:CLSN2916729
ArrayExpress:Q9FIZ5 Genevestigator:Q9FIZ5 Uniprot:Q9FIZ5
Length = 353
Score = 499 (180.7 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 90/190 (47%), Positives = 138/190 (72%)
Query: 121 KRCNWIT-KNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 179
KRC++IT ++ +YVA+HD+ WGVPV+DDN LFELL L+G + +WT +LKR+ FREA
Sbjct: 164 KRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTFREA 223
Query: 180 FGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGY 239
F GF+ + VA EK+I I ++ I L++ V +VDNAK I+K+ + GSF+ ++WG+
Sbjct: 224 FSGFEAELVADFNEKKIQSIVNDYGINLSQ--VLAVVDNAKQILKVKRDLGSFNKYIWGF 281
Query: 240 VNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDC 299
+ KP+ K+ + +P+++ K+E IS+D+++RGFR VGP +++S MQAAGLT DHL+ C
Sbjct: 282 MKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHLITC 341
Query: 300 FRYSECVSLA 309
R+ EC ++A
Sbjct: 342 PRHLECTAMA 351
Score = 44 (20.5 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 11 LEKNRSPKEKEPKPTQSLLSKHLKKVYPIGL 41
L++ S K+ PKP + SK + PI L
Sbjct: 33 LDRRNSLKKSPPKPLNPIASK-IPSPRPISL 62
>TAIR|locus:2087710 [details] [associations]
symbol:AT3G12710 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA;ISS] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352
EMBL:CP002686 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB024033 HSSP:P05100
IPI:IPI00517252 RefSeq:NP_566433.1 UniGene:At.23022
ProteinModelPortal:Q9LTW3 SMR:Q9LTW3 EnsemblPlants:AT3G12710.1
GeneID:820453 KEGG:ath:AT3G12710 TAIR:At3g12710 InParanoid:Q9LTW3
OMA:SCPRHRV PhylomeDB:Q9LTW3 ProtClustDB:CLSN2914975
Genevestigator:Q9LTW3 Uniprot:Q9LTW3
Length = 312
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 89/193 (46%), Positives = 136/193 (70%)
Query: 121 KRCNWITK-NNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 179
+RC+++T ++ +YVA+HDE WGVPV+DD LFELL LSG + +WT L+++ +R+A
Sbjct: 122 QRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDWTSTLRKRHDYRKA 181
Query: 180 FGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGY 239
F F+ + VAK+ EKE+ IS I ++ +VR +V+NAK IV+I F S ++WG+
Sbjct: 182 FMEFEAEVVAKLTEKEMNAISIEYKIEMS--KVRGVVENAKKIVEIKKAFVSLEKYLWGF 239
Query: 240 VNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDC 299
VN KP+ ++ +P+++ K+E+IS+D+++RGFR VGP +V+SFMQAAGLT DHL+ C
Sbjct: 240 VNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITC 299
Query: 300 FRYSECVSLAERP 312
R++ C LA P
Sbjct: 300 CRHAPCTLLATNP 312
>TIGR_CMR|CBU_0383 [details] [associations]
symbol:CBU_0383 "DNA-3-methyladenine glycosidase I"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
OMA:KCGENFS GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 TIGRFAMs:TIGR00624 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_819422.2 GeneID:1208266
KEGG:cbu:CBU_0383 PATRIC:17929461 ProtClustDB:CLSK914033
BioCyc:CBUR227377:GJ7S-384-MONOMER Uniprot:Q83EE1
Length = 212
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 70/188 (37%), Positives = 120/188 (63%)
Query: 121 KRCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAF 180
+RC W++ N+ +Y+ +HD WGVP+YDD LFE L L GM +W ILK++ +R++F
Sbjct: 19 ERCAWVS-NDPLYIHYHDLEWGVPIYDDRLLFEFLILEGMQAGLSWLTILKKRNNYRDSF 77
Query: 181 GGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYV 240
FD ++K ++I + N I+ + +++ ++NAK +++ E+ +FS ++W +V
Sbjct: 78 NNFDASIISKYNPRKIDRLLENAGIIRNKLKIQATINNAKAFLEVKKEWRNFSDYIWHFV 137
Query: 241 NFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCF 300
+ P+ N+++ + +P RS ++ +S+DL KRGF+ VG I Y+FMQA G+ DH +CF
Sbjct: 138 DGHPIQNQWKNAKQIPTRSAISDVLSKDLKKRGFKFVGSTICYAFMQAVGMVNDHTTNCF 197
Query: 301 RYSECVSL 308
RY E +L
Sbjct: 198 RYEEIKNL 205
>TIGR_CMR|GSU_0567 [details] [associations]
symbol:GSU_0567 "DNA-3-methyladenine glycosylase I"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE017180 GenomeReviews:AE017180_GR
RefSeq:NP_951625.1 ProteinModelPortal:Q74FN9 SMR:Q74FN9
GeneID:2685903 KEGG:gsu:GSU0567 PATRIC:22023883 OMA:HELFEYL
ProtClustDB:CLSK746102 BioCyc:GSUL243231:GH27-592-MONOMER
Uniprot:Q74FN9
Length = 191
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 72/185 (38%), Positives = 117/185 (63%)
Query: 120 LKRCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 179
++RC W + +YVA+HD WGVP +DD LFE+L L G +W IL+++E +R A
Sbjct: 2 IQRCEWCG-TDPLYVAYHDGEWGVPAHDDRHLFEMLILEGAQAGLSWLTILRKREAYRRA 60
Query: 180 FGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGY 239
F GFD ++VA E ++ + ++ I+ ++ + NA+ ++KI EFGS +++W +
Sbjct: 61 FAGFDAETVAAWSEADVARLLADPGIVRNRLKIESTIRNARGVLKIREEFGSLDAYLWRF 120
Query: 240 VNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDC 299
V+ P N +R ++P R+ +++A+S+DL +RGF VG I Y+FMQA G+ DH+V C
Sbjct: 121 VDHAPRHNAWRSLTDIPARTEQSDAMSKDLKRRGFNFVGSTICYAFMQAVGMVNDHVVHC 180
Query: 300 FRYSE 304
FR+ E
Sbjct: 181 FRHDE 185
>TIGR_CMR|SO_0016 [details] [associations]
symbol:SO_0016 "DNA-3-methyladenine glycosidase I"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P05100 RefSeq:NP_715658.1 ProteinModelPortal:Q8EKS4 SMR:Q8EKS4
GeneID:1167914 KEGG:son:SO_0016 PATRIC:23519723 OMA:FKMLILE
ProtClustDB:CLSK905542 Uniprot:Q8EKS4
Length = 191
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 70/184 (38%), Positives = 110/184 (59%)
Query: 122 RCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFG 181
RCNW++ ++ +Y +HD WG PVYD +LF L L G +W ILK+++ + +AF
Sbjct: 5 RCNWVS-DDPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAFA 63
Query: 182 GFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVN 241
F+P +A + ++ E+ +N I+ ++ I+ NAK + + FS+F+W +V
Sbjct: 64 DFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWSFVG 123
Query: 242 FKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFR 301
KP +N+F +P ++P++EA+S+ L K GF VGP I Y+FMQA G+ DHLVDC
Sbjct: 124 GKPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVDCVA 183
Query: 302 YSEC 305
Y C
Sbjct: 184 YDAC 187
>TIGR_CMR|CPS_2351 [details] [associations]
symbol:CPS_2351 "DNA-3-methyladenine glycosylase I"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000083 GenomeReviews:CP000083_GR RefSeq:YP_269071.1
ProteinModelPortal:Q482E7 STRING:Q482E7 GeneID:3521376
KEGG:cps:CPS_2351 PATRIC:21467793 OMA:PNELVIC
ProtClustDB:CLSK742465 BioCyc:CPSY167879:GI48-2416-MONOMER
Uniprot:Q482E7
Length = 194
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 68/180 (37%), Positives = 109/180 (60%)
Query: 122 RCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFG 181
RC W+ + YV +HDE WGVPVY+D ++FE L L +W ILK++E +R+ F
Sbjct: 8 RCPWLDTSKLDYVKYHDEEWGVPVYEDKKMFESLVLESAQAGLSWYTILKKREGYRKLFA 67
Query: 182 GFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVN 241
F+ VAK + ++ + + +I+ ++ ++NA ++I NEFGSF+ F+W YVN
Sbjct: 68 DFEVTKVAKFTDDDVERLMQDASIVRYRRKIEAAINNANRFIEIQNEFGSFTKFIWSYVN 127
Query: 242 FKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFR 301
+ ++N ++ SP ++A+++DL KRGF+ +GP +YS +QA GL DH CFR
Sbjct: 128 NETIVNNLDTIKDYVATSPISDALAKDLKKRGFKFLGPTTLYSHLQATGLINDHSNSCFR 187
>UNIPROTKB|Q0C3V6 [details] [associations]
symbol:tag "DNA-3-methyladenine glycosylase I"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
RefSeq:YP_759587.1 ProteinModelPortal:Q0C3V6 SMR:Q0C3V6
STRING:Q0C3V6 GeneID:4288756 KEGG:hne:HNE_0860 PATRIC:32214528
OMA:LVECISY ProtClustDB:CLSK2531831
BioCyc:HNEP228405:GI69-902-MONOMER Uniprot:Q0C3V6
Length = 193
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 71/190 (37%), Positives = 109/190 (57%)
Query: 123 CNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFGG 182
C W + +Y A+HDE WGVP D L+E L L GM +W IL+++E RE F
Sbjct: 7 CGWAPVTDPIYRAYHDEEWGVPERDPRALWEKLQLDGMQAGLSWITILRKRESIREEFDE 66
Query: 183 FDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVNF 242
FDP+ +A+ + + +N I+ + ++ ++ NA+ + ++ FS + WGYV
Sbjct: 67 FDPEKLARWTPRRAEKALTNPGIIRSPKKIDAVIGNARSYLSMMEAGDDFSDYCWGYVGG 126
Query: 243 KPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFRY 302
KP++NK++ R P + + A+SRDL KRGF+ VGP IVY++ QA G+ DH V C R+
Sbjct: 127 KPVVNKWKNFREAPTSTDWSAAMSRDLKKRGFKFVGPTIVYAWAQAVGMVNDHEVGCPRH 186
Query: 303 SECVSLAERP 312
+ ERP
Sbjct: 187 K---GVRERP 193
>UNIPROTKB|P05100 [details] [associations]
symbol:tag "3-methyl-adenine DNA glycosylase I,
constitutive" species:83333 "Escherichia coli K-12" [GO:0006284
"base-excision repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR004597 InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 ECOGENE:EG10986 EMBL:J02606 EMBL:X03845 EMBL:U00039
EMBL:U00096 EMBL:AP009048 PIR:A24604 RefSeq:NP_418005.1
RefSeq:YP_491887.1 PDB:1LMZ PDB:1NKU PDB:1P7M PDBsum:1LMZ
PDBsum:1NKU PDBsum:1P7M ProteinModelPortal:P05100 SMR:P05100
DIP:DIP-10950N IntAct:P05100 MINT:MINT-1230071
EnsemblBacteria:EBESCT00000001171 EnsemblBacteria:EBESCT00000015713
GeneID:12932561 GeneID:947137 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR KEGG:ecj:Y75_p3628 KEGG:eco:b3549
PATRIC:32122570 EchoBASE:EB0979 eggNOG:COG2818 HOGENOM:HOG000220753
KO:K01246 OMA:KCGENFS ProtClustDB:PRK10353
BioCyc:EcoCyc:EG10986-MONOMER BioCyc:ECOL316407:JW3518-MONOMER
BioCyc:MetaCyc:EG10986-MONOMER EvolutionaryTrace:P05100
Genevestigator:P05100 GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 TIGRFAMs:TIGR00624
Uniprot:P05100
Length = 187
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 64/183 (34%), Positives = 108/183 (59%)
Query: 120 LKRCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREA 179
++RC W++++ +Y+A+HD WGVP D +LFE++ L G +W +LK++E +R
Sbjct: 1 MERCGWVSQD-PLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59
Query: 180 FGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGY 239
F FDP VA M E+++ + + I+ +++ I+ NA+ +++ F F+W +
Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSF 119
Query: 240 VNFKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDC 299
VN +P + + +P + ++A+S+ L KRGF+ VG I YSFMQA GL DH+V C
Sbjct: 120 VNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 179
Query: 300 FRY 302
Y
Sbjct: 180 CCY 182
>UNIPROTKB|Q9KRH0 [details] [associations]
symbol:VC1672 "DNA-3-methyladenine glycosidase I"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GenomeReviews:AE003852_GR GO:GO:0006281 HSSP:P05100 OMA:FKMLILE
EMBL:AE004245 PIR:E82171 RefSeq:NP_231308.1
ProteinModelPortal:Q9KRH0 DNASU:2613803 GeneID:2613803
KEGG:vch:VC1672 PATRIC:20082406 ProtClustDB:CLSK874490
Uniprot:Q9KRH0
Length = 193
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 65/186 (34%), Positives = 108/186 (58%)
Query: 123 CNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFGG 182
C W N+ + +HD+ WG V+DD +LFE L L G +W +LK++E +R+AF G
Sbjct: 9 CAW-AMNHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFLG 67
Query: 183 FDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVNF 242
+D + +A+ E + +I + ++ ++ + NA+ + + EFGS + +W +V
Sbjct: 68 YDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVGG 127
Query: 243 KPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFRY 302
+P IN++ +VP + +++A+S+ L KRGF+ VG I Y+FMQA GL DHLV C +
Sbjct: 128 QPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPNH 187
Query: 303 SECVSL 308
S L
Sbjct: 188 SNADKL 193
>TIGR_CMR|VC_1672 [details] [associations]
symbol:VC_1672 "DNA-3-methyladenine glycosidase I"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 GenomeReviews:AE003852_GR
GO:GO:0006281 HSSP:P05100 OMA:FKMLILE EMBL:AE004245 PIR:E82171
RefSeq:NP_231308.1 ProteinModelPortal:Q9KRH0 DNASU:2613803
GeneID:2613803 KEGG:vch:VC1672 PATRIC:20082406
ProtClustDB:CLSK874490 Uniprot:Q9KRH0
Length = 193
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 65/186 (34%), Positives = 108/186 (58%)
Query: 123 CNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFGG 182
C W N+ + +HD+ WG V+DD +LFE L L G +W +LK++E +R+AF G
Sbjct: 9 CAW-AMNHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFLG 67
Query: 183 FDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVNF 242
+D + +A+ E + +I + ++ ++ + NA+ + + EFGS + +W +V
Sbjct: 68 YDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVGG 127
Query: 243 KPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFRY 302
+P IN++ +VP + +++A+S+ L KRGF+ VG I Y+FMQA GL DHLV C +
Sbjct: 128 QPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPNH 187
Query: 303 SECVSL 308
S L
Sbjct: 188 SNADKL 193
>TIGR_CMR|SPO_1900 [details] [associations]
symbol:SPO_1900 "DNA-3-methyladenine glycosylase I"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 EMBL:CP000031 GenomeReviews:CP000031_GR
HOGENOM:HOG000220753 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 RefSeq:YP_167136.1
ProteinModelPortal:Q5LS69 GeneID:3195713 KEGG:sil:SPO1900
PATRIC:23377131 OMA:WRTILAK ProtClustDB:CLSK713517 Uniprot:Q5LS69
Length = 202
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 61/187 (32%), Positives = 97/187 (51%)
Query: 122 RCNWITKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFREAFG 181
RC W + + +HD WG PV DD +LFE L L +W IL ++E FR AF
Sbjct: 13 RCRWCNSAPEFF-DYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTILAKRENFRAAFD 71
Query: 182 GFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIVKILNEFGSFSSFMWGYVN 241
GFD +A ++ + + I+ ++ +++NA+ + +L E GS ++++W Y
Sbjct: 72 GFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRMGDLLAEHGSLAAYVWSY-- 129
Query: 242 FKPMINKFRYPRNVPLRSPKAEAISRDLLKRGFRLVGPVIVYSFMQAAGLTIDHLVDCFR 301
+P P+ + P + A+S+DL KRG++ VGP V++FMQA GL DH C
Sbjct: 130 -EPKPEDLPEPQTASI-IPASTAMSKDLKKRGWKFVGPTTVFAFMQAMGLVNDHARGCVM 187
Query: 302 YSECVSL 308
+ L
Sbjct: 188 RDKAADL 194
>DICTYBASE|DDB_G0271050 [details] [associations]
symbol:magA "methyladenine glycosylase" species:44689
"Dictyostelium discoideum" [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA;ISS] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 dictyBase:DDB_G0271050
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG2818
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0006281 RefSeq:XP_001134476.1
ProteinModelPortal:Q1ZXP8 SMR:Q1ZXP8 STRING:Q1ZXP8
EnsemblProtists:DDB0232992 GeneID:8617613 KEGG:ddi:DDB_G0271050
InParanoid:Q1ZXP8 ProtClustDB:CLSZ2733540 Uniprot:Q1ZXP8
Length = 290
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 65/190 (34%), Positives = 108/190 (56%)
Query: 121 KRCNWI--TKNNKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKELFRE 178
KRC WI TK+ + Y+ +HD WG D +LFE + L +W +LK+++ +R+
Sbjct: 91 KRCFWISLTKDEE-YIHYHDNEWGKENRDSQRLFEKICLEAQQAGLSWITVLKKRQNYRD 149
Query: 179 AFGGFDPKSVAKMGEKEILEIS--SNTAIMLAECRVRCIVDNAKCIVKILNEFG-SFSSF 235
+F FDPK + E++E S NT ++ +++ IVDNA+ +K+ ++ FS+F
Sbjct: 150 SFYNFDPKLIVDNITPEVIENSLMKNTGLIRNRLKLQAIVDNARAYLKMRDQDKIEFSTF 209
Query: 236 MWGYVNFKPMIN-KFRYPRNV----PL-RSPKAEAISRDLLKRGFRLVGPVIVYSFMQAA 289
+W +VN K I + +V PL R+ ++A+S L K+GF+ +G +Y+FMQ+
Sbjct: 210 IWSFVNNKSSIGQRVTGDTSVQGSRPLTRNEVSDAMSVALKKKGFKFIGTTTLYAFMQSV 269
Query: 290 GLTIDHLVDC 299
G+ DH DC
Sbjct: 270 GIINDHCKDC 279
>UNIPROTKB|Q0C5T4 [details] [associations]
symbol:HNE_0175 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 eggNOG:COG2818
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000158 GenomeReviews:CP000158_GR RefSeq:YP_758909.1
ProteinModelPortal:Q0C5T4 STRING:Q0C5T4 GeneID:4289704
KEGG:hne:HNE_0175 PATRIC:32213140 HOGENOM:HOG000002102 OMA:GKDTFIP
ProtClustDB:CLSK863096 BioCyc:HNEP228405:GI69-222-MONOMER
Uniprot:Q0C5T4
Length = 224
Score = 109 (43.4 bits), Expect = 0.00059, P = 0.00059
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 164 YNWTEILKRKELFREAFGGFDPKSVAKMGEKEILEISSNTAIMLAECRVRCIVDNAKCIV 223
+NW I + E F AF GFDP +A G++ + + ++ I+ ++R ++NAK +
Sbjct: 56 FNWKVIEAKWEGFETAFEGFDPAKLAFFGDEMMDHLVTDERIVRNGQKIRATLENAKFVA 115
Query: 224 KILNEFGSFSSFMWGY 239
+ N G F F+ G+
Sbjct: 116 EFENNQGGFGRFLAGW 131
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.138 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 316 273 0.0010 114 3 11 22 0.44 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 607 (65 KB)
Total size of DFA: 215 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.54u 0.10s 20.64t Elapsed: 00:00:01
Total cpu time: 20.54u 0.10s 20.64t Elapsed: 00:00:01
Start: Sat May 11 04:57:36 2013 End: Sat May 11 04:57:37 2013