Query 021175
Match_columns 316
No_of_seqs 398 out of 3497
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 13:51:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021175.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021175hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pl2_A Hypothetical conserved 99.9 3.2E-23 1.1E-27 173.4 21.2 179 116-311 17-206 (217)
2 4gyw_A UDP-N-acetylglucosamine 99.9 5.7E-23 1.9E-27 199.9 21.0 156 146-310 10-165 (723)
3 4ga2_A E3 SUMO-protein ligase 99.9 1.1E-23 3.9E-28 165.9 10.5 140 162-305 9-149 (150)
4 3vtx_A MAMA; tetratricopeptide 99.9 4.1E-22 1.4E-26 161.4 19.3 154 147-309 7-160 (184)
5 2pl2_A Hypothetical conserved 99.9 4.1E-22 1.4E-26 166.6 16.4 144 161-309 16-170 (217)
6 4gco_A Protein STI-1; structur 99.9 3.8E-22 1.3E-26 152.4 13.4 122 175-300 4-125 (126)
7 3vtx_A MAMA; tetratricopeptide 99.9 2.7E-20 9.4E-25 150.6 20.5 160 115-290 16-175 (184)
8 2h6f_A Protein farnesyltransfe 99.9 7.6E-21 2.6E-25 172.2 17.7 173 116-304 109-288 (382)
9 4i17_A Hypothetical protein; T 99.9 5.8E-20 2E-24 154.0 19.9 172 116-303 19-227 (228)
10 2h6f_A Protein farnesyltransfe 99.9 8.2E-21 2.8E-25 172.0 15.4 154 147-309 99-254 (382)
11 4i17_A Hypothetical protein; T 99.9 4.8E-20 1.6E-24 154.4 18.6 142 161-306 18-169 (228)
12 4eqf_A PEX5-related protein; a 99.8 1.8E-19 6.3E-24 161.2 21.6 148 162-309 111-300 (365)
13 1w3b_A UDP-N-acetylglucosamine 99.8 2.2E-19 7.7E-24 162.1 21.7 144 162-309 215-358 (388)
14 1w3b_A UDP-N-acetylglucosamine 99.8 2.5E-19 8.6E-24 161.8 21.3 177 117-309 148-324 (388)
15 3uq3_A Heat shock protein STI1 99.8 4.6E-19 1.6E-23 150.0 21.7 181 116-309 17-226 (258)
16 3gyz_A Chaperone protein IPGC; 99.8 1.6E-20 5.6E-25 147.8 10.7 122 165-290 17-138 (151)
17 4abn_A Tetratricopeptide repea 99.8 5.3E-20 1.8E-24 171.6 15.8 178 115-309 113-311 (474)
18 4gyw_A UDP-N-acetylglucosamine 99.8 1E-19 3.5E-24 177.0 17.6 158 115-288 20-177 (723)
19 2q7f_A YRRB protein; TPR, prot 99.8 3.5E-19 1.2E-23 149.6 17.8 144 162-309 69-212 (243)
20 2ho1_A Type 4 fimbrial biogene 99.8 2.1E-18 7.3E-23 146.0 22.6 180 116-309 49-228 (252)
21 2vgx_A Chaperone SYCD; alterna 99.8 3.1E-20 1.1E-24 145.8 9.9 132 170-305 7-138 (148)
22 3urz_A Uncharacterized protein 99.8 3.7E-19 1.3E-23 147.5 16.0 136 160-300 14-200 (208)
23 2vq2_A PILW, putative fimbrial 99.8 4.7E-18 1.6E-22 140.7 22.5 180 116-309 20-201 (225)
24 3as5_A MAMA; tetratricopeptide 99.8 6.7E-19 2.3E-23 141.2 16.5 145 161-309 19-163 (186)
25 3hym_B Cell division cycle pro 99.8 1.5E-18 5.2E-23 152.1 19.9 147 161-307 170-322 (330)
26 1fch_A Peroxisomal targeting s 99.8 3.5E-18 1.2E-22 152.5 22.2 144 162-309 193-349 (368)
27 2q7f_A YRRB protein; TPR, prot 99.8 2.8E-18 9.4E-23 144.1 20.2 173 116-304 69-241 (243)
28 2pzi_A Probable serine/threoni 99.8 1.6E-19 5.4E-24 175.6 13.9 141 161-306 444-584 (681)
29 3uq3_A Heat shock protein STI1 99.8 2.7E-18 9.2E-23 145.2 19.8 176 115-299 49-256 (258)
30 1fch_A Peroxisomal targeting s 99.8 4.2E-18 1.4E-22 152.1 21.9 182 116-309 76-304 (368)
31 3ieg_A DNAJ homolog subfamily 99.8 6.2E-18 2.1E-22 149.7 22.6 178 116-309 15-207 (359)
32 4abn_A Tetratricopeptide repea 99.8 3.3E-19 1.1E-23 166.2 14.3 153 147-309 104-277 (474)
33 4eqf_A PEX5-related protein; a 99.8 1.2E-18 4.2E-23 155.8 17.0 184 115-307 144-344 (365)
34 3hym_B Cell division cycle pro 99.8 3E-18 1E-22 150.3 18.8 178 116-309 34-212 (330)
35 2vq2_A PILW, putative fimbrial 99.8 2.8E-18 9.5E-23 142.1 17.4 145 161-309 19-166 (225)
36 3qky_A Outer membrane assembly 99.8 1.2E-18 4.3E-23 149.0 15.3 144 160-304 25-199 (261)
37 2xcb_A PCRH, regulatory protei 99.8 3.2E-19 1.1E-23 138.7 10.6 129 171-303 5-133 (142)
38 2ho1_A Type 4 fimbrial biogene 99.8 3.2E-18 1.1E-22 144.9 16.3 154 147-309 39-194 (252)
39 3upv_A Heat shock protein STI1 99.8 2.4E-18 8.1E-23 130.6 13.8 119 181-303 1-125 (126)
40 4gco_A Protein STI-1; structur 99.8 5.4E-18 1.8E-22 129.2 15.1 111 147-266 15-125 (126)
41 3cv0_A Peroxisome targeting si 99.8 1.7E-17 5.8E-22 145.2 20.3 145 161-309 149-305 (327)
42 3u4t_A TPR repeat-containing p 99.8 5.8E-18 2E-22 144.9 16.3 177 116-309 15-198 (272)
43 4ga2_A E3 SUMO-protein ligase 99.8 3.8E-18 1.3E-22 134.1 13.7 138 118-271 11-149 (150)
44 3as5_A MAMA; tetratricopeptide 99.8 2.9E-17 9.8E-22 131.5 18.9 162 116-293 20-181 (186)
45 3ieg_A DNAJ homolog subfamily 99.8 1.1E-16 3.9E-21 141.5 24.4 191 115-309 82-325 (359)
46 3fp2_A TPR repeat-containing p 99.8 1E-17 3.5E-22 157.1 18.5 181 119-309 217-397 (537)
47 3qky_A Outer membrane assembly 99.8 1.3E-17 4.5E-22 142.6 17.7 184 116-309 27-251 (261)
48 2y4t_A DNAJ homolog subfamily 99.8 2.8E-17 9.6E-22 150.8 21.0 178 116-309 38-230 (450)
49 2e2e_A Formate-dependent nitri 99.8 4.5E-18 1.5E-22 136.8 13.8 136 162-301 22-160 (177)
50 2r5s_A Uncharacterized protein 99.8 1.5E-18 5.3E-23 139.8 11.0 145 160-309 16-163 (176)
51 3qou_A Protein YBBN; thioredox 99.8 4.3E-18 1.5E-22 148.3 14.6 146 160-309 127-274 (287)
52 2yhc_A BAMD, UPF0169 lipoprote 99.8 1.5E-17 5E-22 139.5 17.4 149 160-309 14-203 (225)
53 2vsy_A XCC0866; transferase, g 99.8 3.4E-18 1.2E-22 162.7 14.7 132 162-297 35-169 (568)
54 2y4t_A DNAJ homolog subfamily 99.8 6.8E-17 2.3E-21 148.2 22.3 190 115-308 105-313 (450)
55 2xpi_A Anaphase-promoting comp 99.8 4.9E-17 1.7E-21 154.6 21.7 178 116-309 385-569 (597)
56 3u4t_A TPR repeat-containing p 99.8 1.2E-17 4.2E-22 142.8 15.5 146 160-307 13-159 (272)
57 3cv0_A Peroxisome targeting si 99.8 1.7E-16 5.7E-21 138.9 22.9 144 162-309 101-259 (327)
58 2pzi_A Probable serine/threoni 99.8 1.5E-18 5.2E-23 168.6 10.8 144 161-309 402-553 (681)
59 3sz7_A HSC70 cochaperone (SGT) 99.8 5.7E-18 1.9E-22 134.7 12.2 123 180-306 7-131 (164)
60 1xnf_A Lipoprotein NLPI; TPR, 99.8 1.6E-16 5.6E-21 135.7 21.8 163 117-291 18-250 (275)
61 2fo7_A Synthetic consensus TPR 99.8 7.2E-17 2.5E-21 122.1 17.4 125 161-289 12-136 (136)
62 3rkv_A Putative peptidylprolyl 99.8 1.2E-17 4E-22 132.6 13.4 129 183-311 10-153 (162)
63 2xpi_A Anaphase-promoting comp 99.8 1.2E-16 4.2E-21 151.9 23.0 175 115-301 418-595 (597)
64 2vsy_A XCC0866; transferase, g 99.8 3.3E-17 1.1E-21 155.9 18.4 143 163-309 2-147 (568)
65 4gcn_A Protein STI-1; structur 99.8 9.1E-18 3.1E-22 128.1 11.8 112 183-299 7-125 (127)
66 1p5q_A FKBP52, FK506-binding p 99.7 3.2E-19 1.1E-23 159.0 4.2 130 146-284 148-293 (336)
67 1hh8_A P67PHOX, NCF-2, neutrop 99.7 2.1E-16 7E-21 130.5 19.6 130 160-296 16-161 (213)
68 2lni_A Stress-induced-phosphop 99.7 4.6E-17 1.6E-21 123.5 14.1 122 180-305 12-133 (133)
69 3mkr_A Coatomer subunit epsilo 99.7 3E-16 1E-20 136.9 21.2 137 162-307 113-251 (291)
70 3edt_B KLC 2, kinesin light ch 99.7 1.9E-17 6.5E-22 141.6 13.2 164 117-285 14-198 (283)
71 2vyi_A SGTA protein; chaperone 99.7 4.7E-17 1.6E-21 122.7 13.9 125 179-307 7-131 (131)
72 2hr2_A Hypothetical protein; a 99.7 1.3E-17 4.4E-22 130.7 10.4 119 184-302 11-148 (159)
73 1qqe_A Vesicular transport pro 99.7 7.1E-17 2.4E-21 140.8 16.3 171 116-292 49-235 (292)
74 3urz_A Uncharacterized protein 99.7 6.9E-17 2.3E-21 133.8 15.1 118 183-304 3-136 (208)
75 2fbn_A 70 kDa peptidylprolyl i 99.7 4E-18 1.4E-22 139.8 7.5 145 162-310 16-176 (198)
76 2ond_A Cleavage stimulation fa 99.7 2.2E-16 7.6E-21 138.6 18.5 140 166-309 80-222 (308)
77 1xnf_A Lipoprotein NLPI; TPR, 99.7 4.5E-17 1.5E-21 139.2 12.9 133 162-298 17-153 (275)
78 3q49_B STIP1 homology and U bo 99.7 1.6E-16 5.4E-21 121.7 14.3 123 178-304 3-130 (137)
79 2gw1_A Mitochondrial precursor 99.7 1.3E-16 4.3E-21 148.5 15.7 183 117-309 202-391 (514)
80 1elw_A TPR1-domain of HOP; HOP 99.7 4.1E-16 1.4E-20 115.4 15.5 115 183-301 3-117 (118)
81 1qqe_A Vesicular transport pro 99.7 1.2E-16 4.3E-21 139.2 14.5 148 162-309 49-218 (292)
82 2dba_A Smooth muscle cell asso 99.7 5.3E-16 1.8E-20 120.0 16.6 121 179-303 23-146 (148)
83 3fp2_A TPR repeat-containing p 99.7 2.2E-16 7.4E-21 148.0 17.0 177 117-309 289-481 (537)
84 2gw1_A Mitochondrial precursor 99.7 7.1E-17 2.4E-21 150.2 13.0 144 162-309 316-468 (514)
85 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 2.9E-18 9.9E-23 159.1 3.5 140 164-307 248-402 (457)
86 1na0_A Designed protein CTPR3; 99.7 6.8E-16 2.3E-20 115.3 15.8 121 180-304 4-125 (125)
87 1hxi_A PEX5, peroxisome target 99.7 1.4E-16 4.7E-21 120.4 11.7 103 185-291 18-120 (121)
88 2ond_A Cleavage stimulation fa 99.7 1.1E-15 3.7E-20 134.2 19.2 173 121-309 81-260 (308)
89 3mkr_A Coatomer subunit epsilo 99.7 2.1E-15 7.1E-20 131.6 20.5 132 161-296 141-275 (291)
90 3gyz_A Chaperone protein IPGC; 99.7 1.6E-17 5.4E-22 130.7 6.3 101 205-309 23-123 (151)
91 3nf1_A KLC 1, kinesin light ch 99.7 3.9E-16 1.3E-20 135.6 15.7 189 116-309 39-297 (311)
92 1a17_A Serine/threonine protei 99.7 1.2E-15 4.2E-20 120.2 16.8 121 161-285 24-146 (166)
93 2yhc_A BAMD, UPF0169 lipoprote 99.7 2.6E-15 9E-20 125.6 19.1 164 116-292 16-220 (225)
94 1p5q_A FKBP52, FK506-binding p 99.7 1.6E-15 5.6E-20 134.9 17.1 143 163-309 126-283 (336)
95 2xev_A YBGF; tetratricopeptide 99.7 1.2E-15 3.9E-20 115.6 13.9 118 185-306 3-126 (129)
96 1ouv_A Conserved hypothetical 99.7 3.2E-14 1.1E-18 122.1 24.0 167 117-309 55-241 (273)
97 3upv_A Heat shock protein STI1 99.7 2.8E-15 9.6E-20 113.4 15.2 106 160-269 14-125 (126)
98 1ouv_A Conserved hypothetical 99.7 2E-14 6.9E-19 123.3 22.3 168 116-309 18-205 (273)
99 1a17_A Serine/threonine protei 99.7 8.4E-16 2.9E-20 121.2 12.4 121 183-307 12-134 (166)
100 3ulq_A Response regulator aspa 99.7 2.3E-15 7.9E-20 135.8 16.9 185 115-305 114-318 (383)
101 3ulq_A Response regulator aspa 99.7 4.8E-16 1.6E-20 140.3 12.1 151 159-309 112-283 (383)
102 3k9i_A BH0479 protein; putativ 99.7 7.2E-16 2.5E-20 115.4 10.6 109 196-308 2-113 (117)
103 1elr_A TPR2A-domain of HOP; HO 99.7 9.6E-16 3.3E-20 115.6 11.3 120 182-306 2-128 (131)
104 2kck_A TPR repeat; tetratricop 99.6 8.1E-16 2.8E-20 112.8 10.4 108 179-290 1-111 (112)
105 3nf1_A KLC 1, kinesin light ch 99.6 8.4E-16 2.9E-20 133.4 11.5 158 147-309 29-214 (311)
106 2fo7_A Synthetic consensus TPR 99.6 2.9E-15 9.9E-20 113.1 12.9 121 185-309 2-122 (136)
107 2vyi_A SGTA protein; chaperone 99.6 7.2E-15 2.5E-19 110.6 15.0 108 161-272 23-130 (131)
108 2lni_A Stress-induced-phosphop 99.6 3.6E-15 1.2E-19 112.9 13.4 106 162-271 28-133 (133)
109 3edt_B KLC 2, kinesin light ch 99.6 3.5E-16 1.2E-20 133.7 7.8 148 162-309 13-188 (283)
110 2vgx_A Chaperone SYCD; alterna 99.6 1.5E-15 5E-20 118.9 10.7 94 162-259 33-126 (148)
111 2xcb_A PCRH, regulatory protei 99.6 2.3E-15 7.7E-20 116.7 11.6 103 161-267 29-131 (142)
112 3sz7_A HSC70 cochaperone (SGT) 99.6 5.3E-15 1.8E-19 117.3 13.8 103 161-267 22-124 (164)
113 2r5s_A Uncharacterized protein 99.6 3E-15 1E-19 120.4 12.5 152 116-284 18-172 (176)
114 3q15_A PSP28, response regulat 99.6 1.2E-14 4.3E-19 130.9 17.6 168 115-288 112-293 (378)
115 2fbn_A 70 kDa peptidylprolyl i 99.6 7.3E-15 2.5E-19 120.2 14.5 119 161-283 49-184 (198)
116 4a1s_A PINS, partner of inscut 99.6 1.9E-15 6.6E-20 136.9 12.1 146 162-307 138-320 (411)
117 3rjv_A Putative SEL1 repeat pr 99.6 1.6E-14 5.4E-19 119.9 16.6 142 147-303 20-175 (212)
118 3sf4_A G-protein-signaling mod 99.6 3.9E-15 1.3E-19 134.1 13.7 188 116-309 99-326 (406)
119 3q15_A PSP28, response regulat 99.6 6.4E-15 2.2E-19 132.8 15.1 150 160-309 111-280 (378)
120 4g1t_A Interferon-induced prot 99.6 6E-15 2E-19 136.3 15.2 178 118-308 152-352 (472)
121 4g1t_A Interferon-induced prot 99.6 1.6E-14 5.4E-19 133.4 17.9 181 115-302 105-293 (472)
122 1ihg_A Cyclophilin 40; ppiase 99.6 2.5E-15 8.5E-20 135.5 11.8 125 185-309 224-360 (370)
123 1wao_1 Serine/threonine protei 99.6 6.6E-16 2.2E-20 143.9 8.2 127 162-292 18-157 (477)
124 1zu2_A Mitochondrial import re 99.6 1.2E-15 4.1E-20 119.2 8.3 110 162-299 14-134 (158)
125 3sf4_A G-protein-signaling mod 99.6 8.2E-15 2.8E-19 131.9 15.1 158 146-308 188-365 (406)
126 2qfc_A PLCR protein; TPR, HTH, 99.6 1.5E-14 5.1E-19 125.9 16.2 150 160-309 85-255 (293)
127 4gcn_A Protein STI-1; structur 99.6 1.9E-14 6.4E-19 109.5 14.8 107 147-259 10-119 (127)
128 3qou_A Protein YBBN; thioredox 99.6 9.9E-15 3.4E-19 126.9 14.9 154 115-284 128-283 (287)
129 4a1s_A PINS, partner of inscut 99.6 4.5E-15 1.5E-19 134.5 12.7 186 116-309 60-282 (411)
130 2c2l_A CHIP, carboxy terminus 99.6 4.7E-15 1.6E-19 128.6 11.9 135 161-301 15-180 (281)
131 3ro2_A PINS homolog, G-protein 99.6 1.3E-14 4.3E-19 126.7 14.4 189 115-309 94-322 (338)
132 2ifu_A Gamma-SNAP; membrane fu 99.6 4.9E-15 1.7E-19 130.0 11.6 132 160-293 86-231 (307)
133 3rkv_A Putative peptidylprolyl 99.6 8.2E-15 2.8E-19 116.0 11.6 108 161-272 22-148 (162)
134 3u3w_A Transcriptional activat 99.6 3.1E-14 1.1E-18 123.9 16.3 165 116-286 87-267 (293)
135 1na0_A Designed protein CTPR3; 99.6 7.3E-14 2.5E-18 104.0 16.2 106 161-270 20-125 (125)
136 2hr2_A Hypothetical protein; a 99.6 1.6E-14 5.5E-19 113.0 12.9 103 160-262 21-142 (159)
137 1hh8_A P67PHOX, NCF-2, neutrop 99.6 1.1E-14 3.9E-19 119.9 12.6 119 184-309 6-140 (213)
138 3ro2_A PINS homolog, G-protein 99.6 8.1E-15 2.8E-19 127.9 11.9 188 116-309 55-282 (338)
139 1zu2_A Mitochondrial import re 99.6 4.8E-15 1.6E-19 115.8 9.1 95 128-256 20-125 (158)
140 1hxi_A PEX5, peroxisome target 99.6 1E-14 3.6E-19 110.0 10.8 94 160-257 27-120 (121)
141 1wao_1 Serine/threonine protei 99.6 8.1E-16 2.8E-20 143.3 5.6 125 183-311 5-131 (477)
142 2ifu_A Gamma-SNAP; membrane fu 99.6 2.6E-14 8.9E-19 125.4 14.9 147 162-309 48-214 (307)
143 2if4_A ATFKBP42; FKBP-like, al 99.6 2.2E-15 7.4E-20 134.3 7.9 112 185-300 180-308 (338)
144 1elw_A TPR1-domain of HOP; HOP 99.6 9.6E-14 3.3E-18 102.4 15.5 103 160-266 14-116 (118)
145 2qfc_A PLCR protein; TPR, HTH, 99.6 9.6E-14 3.3E-18 120.7 17.7 165 116-286 87-267 (293)
146 1dce_A Protein (RAB geranylger 99.6 1.3E-13 4.3E-18 131.0 19.2 174 119-308 44-244 (567)
147 3u3w_A Transcriptional activat 99.6 3.2E-14 1.1E-18 123.8 13.6 150 160-309 85-256 (293)
148 2c2l_A CHIP, carboxy terminus 99.6 3E-14 1E-18 123.5 13.3 106 181-290 1-106 (281)
149 3gw4_A Uncharacterized protein 99.6 2.5E-14 8.5E-19 116.6 12.0 152 147-304 28-194 (203)
150 3q49_B STIP1 homology and U bo 99.6 4.3E-14 1.5E-18 108.0 12.5 107 161-271 20-131 (137)
151 1kt0_A FKBP51, 51 kDa FK506-bi 99.6 3.8E-14 1.3E-18 131.4 14.4 128 146-282 269-412 (457)
152 2if4_A ATFKBP42; FKBP-like, al 99.5 4.1E-15 1.4E-19 132.4 6.9 127 161-291 190-334 (338)
153 3rjv_A Putative SEL1 repeat pr 99.5 5.6E-13 1.9E-17 110.5 19.1 160 117-300 31-210 (212)
154 3k9i_A BH0479 protein; putativ 99.5 6.3E-15 2.2E-19 110.2 6.3 98 162-263 2-102 (117)
155 2xev_A YBGF; tetratricopeptide 99.5 2.7E-13 9.2E-18 102.4 15.5 108 160-271 12-125 (129)
156 3dra_A Protein farnesyltransfe 99.5 6.1E-13 2.1E-17 116.3 19.7 171 120-306 49-236 (306)
157 2ooe_A Cleavage stimulation fa 99.5 4.5E-13 1.5E-17 126.2 19.5 171 122-308 304-481 (530)
158 3ro3_A PINS homolog, G-protein 99.5 1.4E-13 4.9E-18 107.1 13.2 137 147-288 11-161 (164)
159 2ooe_A Cleavage stimulation fa 99.5 1.9E-13 6.6E-18 128.7 16.5 143 163-309 292-444 (530)
160 1ihg_A Cyclophilin 40; ppiase 99.5 1.1E-13 3.8E-18 124.7 14.0 123 147-278 225-363 (370)
161 2dba_A Smooth muscle cell asso 99.5 2.5E-13 8.5E-18 104.7 13.6 104 161-268 39-145 (148)
162 2e2e_A Formate-dependent nitri 99.5 2.1E-14 7.3E-19 115.1 7.5 112 194-309 20-134 (177)
163 1elr_A TPR2A-domain of HOP; HO 99.5 2.8E-13 9.6E-18 101.8 13.1 105 161-270 15-126 (131)
164 4f3v_A ESX-1 secretion system 99.5 1.8E-13 6.2E-18 117.4 13.3 133 161-298 113-249 (282)
165 3gw4_A Uncharacterized protein 99.5 4.3E-13 1.5E-17 109.2 14.0 149 161-309 3-166 (203)
166 3q7a_A Farnesyltransferase alp 99.5 6.5E-12 2.2E-16 111.1 20.2 171 120-306 70-258 (349)
167 2l6j_A TPR repeat-containing p 99.5 9.1E-13 3.1E-17 96.6 12.3 89 221-309 3-97 (111)
168 2kat_A Uncharacterized protein 99.4 5.8E-13 2E-17 98.9 9.8 83 202-288 3-85 (115)
169 3dss_A Geranylgeranyl transfer 99.4 1.8E-11 6.2E-16 107.7 20.8 177 120-302 46-239 (331)
170 1na3_A Designed protein CTPR2; 99.4 1.9E-12 6.5E-17 91.3 12.0 85 219-303 6-90 (91)
171 4f3v_A ESX-1 secretion system 99.4 7.3E-14 2.5E-18 119.9 5.3 183 117-309 19-227 (282)
172 1dce_A Protein (RAB geranylger 99.4 2.7E-12 9.4E-17 121.8 16.5 143 162-308 40-196 (567)
173 2l6j_A TPR repeat-containing p 99.4 6.2E-14 2.1E-18 102.9 4.0 95 183-281 3-103 (111)
174 1hz4_A MALT regulatory protein 99.4 3.1E-12 1.1E-16 114.5 15.7 148 162-309 26-193 (373)
175 3dra_A Protein farnesyltransfe 99.4 7.6E-12 2.6E-16 109.3 16.9 140 162-305 44-195 (306)
176 1klx_A Cysteine rich protein B 99.4 8.8E-12 3E-16 96.1 15.2 123 162-298 7-137 (138)
177 1hz4_A MALT regulatory protein 99.4 2.6E-11 9E-16 108.5 20.4 188 116-309 65-272 (373)
178 2xm6_A Protein corresponding t 99.4 1.6E-11 5.5E-16 114.4 19.6 134 163-308 272-421 (490)
179 2kck_A TPR repeat; tetratricop 99.4 1.5E-12 5.2E-17 95.0 10.0 90 162-255 18-110 (112)
180 2xm6_A Protein corresponding t 99.4 2.6E-11 8.9E-16 113.0 20.7 128 163-302 92-231 (490)
181 1na3_A Designed protein CTPR2; 99.4 2.6E-12 8.9E-17 90.6 10.5 85 182-270 7-91 (91)
182 2kat_A Uncharacterized protein 99.4 3.6E-12 1.2E-16 94.5 11.1 98 168-269 3-102 (115)
183 3ro3_A PINS homolog, G-protein 99.4 2E-12 6.9E-17 100.5 9.0 126 184-309 9-148 (164)
184 3q7a_A Farnesyltransferase alp 99.4 2.3E-11 7.9E-16 107.6 16.2 140 163-306 67-217 (349)
185 3ma5_A Tetratricopeptide repea 99.3 3.8E-12 1.3E-16 92.3 9.1 89 218-306 3-93 (100)
186 3e4b_A ALGK; tetratricopeptide 99.3 7.7E-11 2.6E-15 108.9 18.4 124 164-302 231-366 (452)
187 3e4b_A ALGK; tetratricopeptide 99.3 4.6E-11 1.6E-15 110.4 16.5 137 148-302 179-330 (452)
188 2kc7_A BFR218_protein; tetratr 99.3 2.8E-12 9.6E-17 92.3 6.5 91 188-290 4-95 (99)
189 3n71_A Histone lysine methyltr 99.3 1.2E-11 4E-16 115.1 12.2 127 160-286 319-465 (490)
190 3dss_A Geranylgeranyl transfer 99.3 9.1E-11 3.1E-15 103.2 16.3 140 162-305 41-194 (331)
191 3ma5_A Tetratricopeptide repea 99.2 2.7E-11 9.2E-16 87.7 8.8 86 179-268 2-89 (100)
192 3mv2_B Coatomer subunit epsilo 99.2 3.8E-10 1.3E-14 98.0 16.5 137 162-305 112-270 (310)
193 4b4t_Q 26S proteasome regulato 99.2 6.4E-11 2.2E-15 107.9 9.6 151 158-308 12-193 (434)
194 3n71_A Histone lysine methyltr 99.2 5.6E-11 1.9E-15 110.5 9.0 121 189-309 314-454 (490)
195 2kc7_A BFR218_protein; tetratr 99.2 3.5E-10 1.2E-14 81.1 10.8 78 225-302 3-83 (99)
196 4b4t_Q 26S proteasome regulato 99.1 1.5E-09 5.1E-14 98.7 14.5 189 116-309 16-235 (434)
197 3bee_A Putative YFRE protein; 99.1 1.6E-09 5.3E-14 77.3 11.2 76 218-293 2-80 (93)
198 3ly7_A Transcriptional activat 99.1 4.8E-09 1.6E-13 92.8 16.5 127 163-290 212-344 (372)
199 3qww_A SET and MYND domain-con 99.1 2.3E-09 7.8E-14 98.1 14.2 103 196-298 310-429 (433)
200 3mv2_B Coatomer subunit epsilo 99.0 1.6E-08 5.4E-13 87.8 18.5 128 160-296 146-293 (310)
201 1pc2_A Mitochondria fission pr 99.0 2.6E-09 8.9E-14 82.4 11.1 94 164-261 12-110 (152)
202 1pc2_A Mitochondria fission pr 99.0 1.2E-08 4.1E-13 78.7 13.4 100 200-303 14-118 (152)
203 2v5f_A Prolyl 4-hydroxylase su 99.0 1E-08 3.5E-13 74.7 12.0 81 183-263 4-87 (104)
204 2v5f_A Prolyl 4-hydroxylase su 99.0 8.3E-09 2.8E-13 75.1 11.3 81 222-302 5-92 (104)
205 3qwp_A SET and MYND domain-con 99.0 1.2E-08 4.2E-13 93.3 14.7 104 192-295 295-415 (429)
206 1xi4_A Clathrin heavy chain; a 98.9 4E-08 1.4E-12 99.4 19.1 129 162-302 1146-1326(1630)
207 3u64_A Protein TP_0956; tetrat 98.9 9.6E-08 3.3E-12 81.3 17.9 107 179-289 147-273 (301)
208 3qwp_A SET and MYND domain-con 98.9 4.2E-09 1.4E-13 96.4 10.4 109 160-268 297-425 (429)
209 1xi4_A Clathrin heavy chain; a 98.9 3E-08 1E-12 100.3 17.0 115 157-285 1112-1250(1630)
210 1klx_A Cysteine rich protein B 98.9 2.8E-08 9.5E-13 76.2 13.2 92 162-263 37-136 (138)
211 3qww_A SET and MYND domain-con 98.9 6.4E-09 2.2E-13 95.1 9.8 97 162-258 310-423 (433)
212 3bee_A Putative YFRE protein; 98.8 1.7E-08 5.9E-13 71.8 9.2 72 180-255 2-76 (93)
213 1b89_A Protein (clathrin heavy 98.7 6E-08 2.1E-12 88.0 11.3 130 147-302 124-253 (449)
214 4e6h_A MRNA 3'-END-processing 98.7 3.4E-07 1.2E-11 88.3 16.7 190 104-308 342-559 (679)
215 1b89_A Protein (clathrin heavy 98.6 3.5E-08 1.2E-12 89.5 7.0 135 162-309 160-301 (449)
216 4e6h_A MRNA 3'-END-processing 98.6 4.9E-07 1.7E-11 87.2 14.5 146 162-307 355-521 (679)
217 1nzn_A CGI-135 protein, fissio 98.5 5.9E-06 2E-10 61.4 14.2 100 162-265 13-117 (126)
218 3ly7_A Transcriptional activat 98.5 4.1E-06 1.4E-10 74.1 15.6 131 118-257 213-345 (372)
219 3u64_A Protein TP_0956; tetrat 98.5 4.5E-07 1.5E-11 77.2 8.5 89 163-255 176-273 (301)
220 1nzn_A CGI-135 protein, fissio 98.5 9.6E-07 3.3E-11 65.6 9.2 101 199-303 16-121 (126)
221 4h7y_A Dual specificity protei 98.3 2.5E-05 8.5E-10 59.4 12.9 116 178-294 7-132 (161)
222 2uy1_A Cleavage stimulation fa 98.1 3.5E-05 1.2E-09 71.7 12.9 140 166-307 195-371 (493)
223 3ffl_A Anaphase-promoting comp 98.0 3.5E-05 1.2E-09 59.8 9.3 130 158-301 28-166 (167)
224 3ffl_A Anaphase-promoting comp 98.0 4.2E-05 1.4E-09 59.4 9.2 98 152-266 65-165 (167)
225 3o48_A Mitochondria fission 1 98.0 9.5E-05 3.3E-09 55.1 10.7 81 222-302 40-124 (134)
226 1y8m_A FIS1; mitochondria, unk 97.9 0.00019 6.4E-09 54.2 11.5 84 220-303 37-124 (144)
227 2uy1_A Cleavage stimulation fa 97.9 0.00075 2.6E-08 62.7 17.8 135 162-306 225-400 (493)
228 4g26_A Pentatricopeptide repea 97.7 0.0038 1.3E-07 58.0 19.8 120 163-285 83-204 (501)
229 3o48_A Mitochondria fission 1 97.7 0.0012 4E-08 49.2 12.8 97 165-266 22-122 (134)
230 4g26_A Pentatricopeptide repea 97.7 0.0016 5.4E-08 60.6 16.6 145 162-309 38-194 (501)
231 1y8m_A FIS1; mitochondria, unk 97.6 0.0023 7.9E-08 48.2 13.8 81 181-265 36-120 (144)
232 4gns_B Protein CSD3, chitin bi 97.2 0.0051 1.7E-07 59.6 14.0 119 163-282 261-397 (754)
233 1ya0_A SMG-7 transcript varian 97.0 0.0058 2E-07 56.5 11.1 81 223-303 153-233 (497)
234 2ff4_A Probable regulatory pro 96.7 0.017 5.8E-07 51.7 11.8 89 196-284 127-233 (388)
235 4h7y_A Dual specificity protei 96.6 0.03 1E-06 42.6 10.7 87 167-258 36-130 (161)
236 3mkq_B Coatomer subunit alpha; 96.6 0.11 3.8E-06 40.7 14.2 48 160-212 15-62 (177)
237 4b4t_R RPN7, 26S proteasome re 96.4 0.027 9.1E-07 51.2 11.6 104 182-286 129-238 (429)
238 1ya0_A SMG-7 transcript varian 96.4 0.016 5.5E-07 53.5 9.8 79 186-268 154-232 (497)
239 1zbp_A Hypothetical protein VP 96.3 0.095 3.2E-06 43.9 13.0 121 160-291 7-135 (273)
240 3txn_A 26S proteasome regulato 96.1 0.2 6.9E-06 44.7 15.0 99 187-285 102-210 (394)
241 3kae_A CDC27, possible protein 95.8 0.14 4.9E-06 39.7 11.0 120 162-293 14-151 (242)
242 2ff4_A Probable regulatory pro 95.6 0.11 3.8E-06 46.3 11.6 85 162-250 127-233 (388)
243 4gns_B Protein CSD3, chitin bi 95.4 0.048 1.6E-06 52.9 8.7 108 197-309 261-390 (754)
244 3mkq_A Coatomer beta'-subunit; 95.4 0.19 6.5E-06 48.8 13.2 107 161-280 663-773 (814)
245 4b4t_S RPN3, 26S proteasome re 95.3 0.092 3.1E-06 48.4 9.9 128 161-290 147-304 (523)
246 1zbp_A Hypothetical protein VP 95.2 0.077 2.6E-06 44.5 8.4 57 195-255 8-64 (273)
247 3mkq_A Coatomer beta'-subunit; 95.2 0.34 1.1E-05 47.0 14.4 82 193-283 661-763 (814)
248 4b4t_P 26S proteasome regulato 94.7 0.63 2.1E-05 42.3 13.7 102 184-285 137-247 (445)
249 3kae_A CDC27, possible protein 94.1 1.6 5.5E-05 33.9 16.3 123 162-289 45-241 (242)
250 4fhn_B Nucleoporin NUP120; pro 93.7 0.68 2.3E-05 47.4 12.8 106 176-281 834-963 (1139)
251 3spa_A Mtrpol, DNA-directed RN 92.8 1 3.4E-05 45.1 11.8 86 162-250 139-229 (1134)
252 1qsa_A Protein (soluble lytic 92.7 1.2 4.1E-05 42.3 12.1 118 162-284 226-347 (618)
253 3txn_A 26S proteasome regulato 92.5 2.3 7.8E-05 37.9 13.0 111 161-271 110-235 (394)
254 4b4t_R RPN7, 26S proteasome re 92.2 1.3 4.4E-05 40.0 11.2 93 162-254 143-240 (429)
255 3spa_A Mtrpol, DNA-directed RN 91.7 5.2 0.00018 40.2 15.4 105 181-285 124-230 (1134)
256 4fhn_B Nucleoporin NUP120; pro 91.3 1.7 5.8E-05 44.5 12.2 114 188-309 816-957 (1139)
257 4b4t_P 26S proteasome regulato 89.0 4.9 0.00017 36.4 12.0 92 160-251 147-247 (445)
258 3mkq_B Coatomer subunit alpha; 88.4 1.6 5.5E-05 34.1 7.2 75 192-283 13-87 (177)
259 1qsa_A Protein (soluble lytic 88.4 16 0.00056 34.5 15.5 132 166-304 268-427 (618)
260 4b4t_S RPN3, 26S proteasome re 87.5 2.7 9.3E-05 38.7 9.2 70 184-255 231-303 (523)
261 4gq2_M Nucleoporin NUP120; bet 85.7 6.3 0.00022 39.4 11.6 94 190-291 816-933 (950)
262 3lpz_A GET4 (YOR164C homolog); 84.8 13 0.00046 32.0 11.8 16 161-176 46-61 (336)
263 2wpv_A GET4, UPF0363 protein Y 83.8 9.4 0.00032 32.7 10.3 25 221-245 133-157 (312)
264 2w2u_A Hypothetical P60 katani 82.4 2.7 9.2E-05 28.3 5.1 17 233-249 30-46 (83)
265 2v6y_A AAA family ATPase, P60 81.7 2.9 9.9E-05 28.1 5.1 18 233-250 22-39 (83)
266 3esl_A Checkpoint serine/threo 78.4 23 0.0008 28.1 14.4 82 205-287 58-146 (202)
267 1wy6_A Hypothetical protein ST 77.3 12 0.00041 28.0 7.4 54 232-285 101-154 (172)
268 4gq2_M Nucleoporin NUP120; bet 77.0 37 0.0013 33.9 13.5 94 160-257 820-933 (950)
269 3t5x_A PCI domain-containing p 77.0 6.4 0.00022 31.4 6.7 81 184-272 14-95 (203)
270 2crb_A Nuclear receptor bindin 76.9 5 0.00017 27.4 4.9 28 222-249 15-42 (97)
271 3re2_A Predicted protein; meni 76.5 6.7 0.00023 34.1 6.8 69 182-250 253-324 (472)
272 2wvi_A Mitotic checkpoint seri 76.3 21 0.00072 27.3 9.1 32 254-285 94-125 (164)
273 1wy6_A Hypothetical protein ST 73.7 13 0.00045 27.7 6.9 50 163-212 104-153 (172)
274 1wfd_A Hypothetical protein 15 73.6 6.7 0.00023 26.9 5.1 18 233-250 26-43 (93)
275 4a1g_A Mitotic checkpoint seri 73.0 17 0.00058 27.5 7.6 77 204-286 48-131 (152)
276 3ax2_A Mitochondrial import re 71.9 18 0.0006 23.6 6.9 27 228-254 23-49 (73)
277 3t5v_B Nuclear mRNA export pro 71.8 14 0.00047 33.5 8.2 92 164-255 140-254 (455)
278 3u84_A Menin; MLL, JUND, ledgf 69.8 11 0.00039 33.4 6.7 69 182-250 275-346 (550)
279 2v6x_A Vacuolar protein sortin 69.7 9.5 0.00032 25.5 5.1 18 233-250 24-41 (85)
280 4aez_C MAD3, mitotic spindle c 69.7 20 0.0007 28.9 7.8 78 204-287 97-181 (223)
281 4a5x_A MITD1, MIT domain-conta 69.3 9.2 0.00032 25.8 5.0 19 232-250 26-44 (86)
282 2cpt_A SKD1 protein, vacuolar 69.2 8.3 0.00029 27.7 5.0 18 233-250 29-46 (117)
283 3ax2_A Mitochondrial import re 69.1 16 0.00056 23.7 5.9 37 260-296 21-57 (73)
284 2v6y_A AAA family ATPase, P60 68.9 9.8 0.00034 25.4 5.0 32 239-285 9-40 (83)
285 2crb_A Nuclear receptor bindin 66.7 10 0.00036 25.8 4.6 30 184-213 15-44 (97)
286 4gq4_A Menin; tumor suppressor 66.1 17 0.00059 32.2 7.1 81 182-262 260-349 (489)
287 3esl_A Checkpoint serine/threo 64.4 30 0.001 27.5 7.7 68 184-254 80-147 (202)
288 3t5v_B Nuclear mRNA export pro 61.3 16 0.00055 33.1 6.4 91 199-289 141-254 (455)
289 1om2_A Protein (mitochondrial 61.0 34 0.0012 23.5 6.5 28 228-255 26-53 (95)
290 3t5x_A PCI domain-containing p 60.0 23 0.00079 28.1 6.5 55 220-274 12-71 (203)
291 2ijq_A Hypothetical protein; s 55.6 66 0.0022 24.4 9.0 60 226-285 36-104 (161)
292 2w2u_A Hypothetical P60 katani 54.2 22 0.00075 23.7 4.6 33 166-213 16-48 (83)
293 2rpa_A Katanin P60 ATPase-cont 53.4 17 0.00057 24.0 3.8 27 187-213 15-41 (78)
294 2cfu_A SDSA1; SDS-hydrolase, l 53.2 28 0.00096 33.1 6.9 50 223-272 450-499 (658)
295 2dl1_A Spartin; SPG20, MIT, st 53.1 26 0.00088 25.0 5.0 13 200-212 19-31 (116)
296 4b4t_O 26S proteasome regulato 52.3 1.2E+02 0.0041 26.6 10.6 89 162-250 88-197 (393)
297 3re2_A Predicted protein; meni 50.9 52 0.0018 28.7 7.4 45 241-285 276-325 (472)
298 3myv_A SUSD superfamily protei 50.4 45 0.0016 29.9 7.6 33 218-250 186-218 (454)
299 2wvi_A Mitotic checkpoint seri 50.1 32 0.0011 26.3 5.5 63 184-254 66-128 (164)
300 2ijq_A Hypothetical protein; s 49.8 82 0.0028 23.9 8.5 65 187-251 35-104 (161)
301 3mv2_A Coatomer subunit alpha; 49.6 1.2E+02 0.0042 25.8 14.6 51 265-315 216-267 (325)
302 4b4t_O 26S proteasome regulato 49.5 1.3E+02 0.0044 26.4 10.3 93 192-284 84-197 (393)
303 2rpa_A Katanin P60 ATPase-cont 48.9 18 0.0006 23.9 3.3 26 225-250 15-40 (78)
304 4gq4_A Menin; tumor suppressor 48.8 1.1E+02 0.0038 27.2 9.2 57 240-296 282-349 (489)
305 3kez_A Putative sugar binding 47.4 51 0.0017 29.6 7.5 33 218-250 192-224 (461)
306 2cfu_A SDSA1; SDS-hydrolase, l 46.2 29 0.00099 33.0 5.8 50 257-306 450-499 (658)
307 2cwy_A Hypothetical protein TT 45.8 68 0.0023 21.8 6.3 55 228-284 7-67 (94)
308 3lew_A SUSD-like carbohydrate 44.3 71 0.0024 29.0 8.0 34 219-252 200-233 (495)
309 1om2_A Protein (mitochondrial 44.2 74 0.0025 21.8 6.2 33 260-292 24-56 (95)
310 4a5x_A MITD1, MIT domain-conta 44.1 39 0.0013 22.6 4.6 22 192-213 24-45 (86)
311 2br9_A 14-3-3E, 14-3-3 protein 43.6 83 0.0029 25.5 7.3 50 201-250 147-201 (234)
312 3mcx_A SUSD superfamily protei 43.4 56 0.0019 29.5 7.1 50 202-251 178-231 (477)
313 2o8p_A 14-3-3 domain containin 41.9 1.4E+02 0.0046 24.1 9.1 53 198-250 139-196 (227)
314 2npm_A 14-3-3 domain containin 40.8 92 0.0031 25.7 7.2 50 201-250 173-226 (260)
315 2v6x_A Vacuolar protein sortin 40.1 48 0.0016 21.9 4.6 21 193-213 22-42 (85)
316 3snx_A SUSD homolog, putative 39.6 72 0.0025 28.7 7.1 33 219-251 188-220 (460)
317 2dl1_A Spartin; SPG20, MIT, st 39.4 22 0.00076 25.4 2.9 26 225-250 25-50 (116)
318 3eab_A Spastin; spastin, MIT, 38.6 26 0.00087 23.8 2.9 13 198-210 33-45 (89)
319 3myv_A SUSD superfamily protei 38.1 87 0.003 28.0 7.4 30 256-285 190-219 (454)
320 2wpv_A GET4, UPF0363 protein Y 37.3 1.9E+02 0.0065 24.5 15.4 80 183-284 133-216 (312)
321 3ubw_A 14-3-3E, 14-3-3 protein 36.7 1.2E+02 0.0042 24.9 7.3 50 201-250 173-227 (261)
322 1o9d_A 14-3-3-like protein C; 36.3 1.2E+02 0.0042 24.9 7.3 50 201-250 152-206 (260)
323 3uzd_A 14-3-3 protein gamma; s 36.1 1.3E+02 0.0044 24.6 7.3 50 201-250 148-202 (248)
324 3kez_A Putative sugar binding 34.5 97 0.0033 27.8 7.2 30 256-285 196-225 (461)
325 4a1g_A Mitotic checkpoint seri 34.5 1.4E+02 0.0049 22.3 8.1 52 201-254 82-133 (152)
326 3hdx_A SUSD homolog, SUSD supe 34.4 1.1E+02 0.0038 27.5 7.6 33 219-251 194-226 (478)
327 3qnk_A Putative lipoprotein; a 33.7 1E+02 0.0035 28.1 7.3 33 219-251 179-211 (517)
328 2cpt_A SKD1 protein, vacuolar 33.0 59 0.002 23.2 4.3 18 195-212 29-46 (117)
329 3lew_A SUSD-like carbohydrate 32.4 1.1E+02 0.0039 27.6 7.3 30 256-285 203-232 (495)
330 2wb7_A PT26-6P; extra chromoso 31.9 37 0.0013 30.8 3.7 20 217-236 469-488 (526)
331 3u84_A Menin; MLL, JUND, ledgf 31.6 2.7E+02 0.0093 24.8 8.9 59 169-227 298-363 (550)
332 3efz_A 14-3-3 protein; 14-3-3, 31.4 1.1E+02 0.0037 25.4 6.2 51 201-251 169-226 (268)
333 3mcx_A SUSD superfamily protei 30.9 1.1E+02 0.0037 27.6 6.9 48 239-286 177-232 (477)
334 3iqu_A 14-3-3 protein sigma; s 30.1 1.8E+02 0.0063 23.5 7.3 50 201-250 150-204 (236)
335 2uwj_G Type III export protein 29.0 1.5E+02 0.005 20.7 7.4 51 226-281 43-93 (115)
336 4ady_A RPN2, 26S proteasome re 28.9 2.5E+02 0.0085 28.0 9.2 156 149-310 373-544 (963)
337 2o8p_A 14-3-3 domain containin 28.7 1.7E+02 0.0057 23.6 6.7 71 235-305 138-223 (227)
338 4aez_C MAD3, mitotic spindle c 28.2 2.3E+02 0.0079 22.7 7.8 52 201-254 131-182 (223)
339 3lxu_X Tripeptidyl-peptidase 2 27.2 5.4E+02 0.019 26.8 11.5 139 164-304 1121-1331(1354)
340 1wfd_A Hypothetical protein 15 26.7 1.5E+02 0.0051 20.0 8.8 20 194-213 25-44 (93)
341 3jq1_A SUSD superfamily protei 26.6 99 0.0034 27.9 5.8 49 202-250 156-208 (481)
342 2p58_C Putative type III secre 26.2 1.7E+02 0.0058 20.4 9.6 75 197-281 20-94 (116)
343 3i4g_A SUSD-like carbohydrate 25.4 1.8E+02 0.0063 26.5 7.5 33 219-251 195-227 (528)
344 3bu8_A Telomeric repeat-bindin 25.4 66 0.0022 25.8 3.7 38 231-268 123-160 (235)
345 2cwy_A Hypothetical protein TT 24.0 1.7E+02 0.0058 19.7 6.6 56 189-250 6-67 (94)
346 2yhe_A SEC-alkyl sulfatase; hy 29.6 17 0.00057 34.8 0.0 51 225-275 464-514 (668)
347 3mkr_B Coatomer subunit alpha; 23.7 3.4E+02 0.012 23.1 13.2 27 265-291 207-233 (320)
348 3lpz_A GET4 (YOR164C homolog); 23.2 3.5E+02 0.012 23.1 17.8 123 182-304 134-296 (336)
349 2vkj_A TM1634; membrane protei 22.5 1.8E+02 0.0063 19.6 7.2 27 225-251 56-82 (106)
350 3qnk_A Putative lipoprotein; a 22.5 2.2E+02 0.0076 25.8 7.4 30 256-285 182-211 (517)
351 2ymb_A MITD1, MIT domain-conta 22.0 19 0.00065 29.8 0.0 25 188-212 27-51 (257)
352 2e2a_A Protein (enzyme IIA); h 21.9 1.4E+02 0.0048 20.7 4.5 32 219-250 17-48 (105)
353 1wcr_A PTS system, N, N'-diace 21.6 1.5E+02 0.005 20.6 4.5 32 219-250 15-46 (103)
354 3o10_A Sacsin; all-helical dom 20.1 1.3E+02 0.0045 22.0 4.4 14 199-212 5-18 (141)
355 2yhe_A SEC-alkyl sulfatase; hy 25.4 22 0.00075 33.9 0.0 49 258-306 463-511 (668)
No 1
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.92 E-value=3.2e-23 Score=173.37 Aligned_cols=179 Identities=14% Similarity=0.051 Sum_probs=156.3
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++.+.|...++.+...+|.... ++..+|..+. ..|++++|+..++++++.+|+++.++.++|.++.
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~-------a~~~lg~~~~-----~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 84 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQDPE-------ALYWLARTQL-----KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYV 84 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSCHH-------HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 456777788889877777777653 3444444454 8999999999999999999999999999999999
Q ss_pred Hc-----------CChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 021175 196 RR-----------KFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGD 264 (316)
Q Consensus 196 ~~-----------g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 264 (316)
.. |++++|++.|+++++ .+|+++.++.++|.++...|++++|++.|+++++++ +++.+++++|.
T Consensus 85 ~~~~~~~~~~~~~g~~~~A~~~~~~al~----~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~ 159 (217)
T 2pl2_A 85 ALYRQAEDRERGKGYLEQALSVLKDAER----VNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAE 159 (217)
T ss_dssp HHHHTCSSHHHHHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHH
T ss_pred HhhhhhhhhcccccCHHHHHHHHHHHHH----hCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHH
Confidence 99 999999999999999 699999999999999999999999999999999999 99999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCCCC
Q 021175 265 AYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGVPV 311 (316)
Q Consensus 265 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A~~ 311 (316)
++..+|++++|+..|+++++++|+++.++..++.++...|++++|..
T Consensus 160 ~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~ 206 (217)
T 2pl2_A 160 LYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAAR 206 (217)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC---------
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHH
Confidence 99999999999999999999999999999999999999999988754
No 2
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.91 E-value=5.7e-23 Score=199.88 Aligned_cols=156 Identities=13% Similarity=0.159 Sum_probs=149.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHH
Q 021175 146 LGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVY 225 (316)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~ 225 (316)
.++..+|..+. .+|++++|++.|+++++.+|+++.+++++|.++..+|++++|+++|+++++ ++|+++.++
T Consensus 10 ~al~nLG~~~~-----~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~----l~P~~~~a~ 80 (723)
T 4gyw_A 10 DSLNNLANIKR-----EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIR----ISPTFADAY 80 (723)
T ss_dssp HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHH
T ss_pred HHHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHH
Confidence 45666666666 999999999999999999999999999999999999999999999999999 699999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 226 NALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 226 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
+++|.++..+|++++|++.|+++++++|+++.+++++|.+|..+|++++|+++|+++++++|+++.++.+++.++..+|+
T Consensus 81 ~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~ 160 (723)
T 4gyw_A 81 SNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCD 160 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 021175 306 YKGVP 310 (316)
Q Consensus 306 ~~~A~ 310 (316)
+++|.
T Consensus 161 ~~~A~ 165 (723)
T 4gyw_A 161 WTDYD 165 (723)
T ss_dssp CTTHH
T ss_pred HHHHH
Confidence 98763
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.90 E-value=1.1e-23 Score=165.87 Aligned_cols=140 Identities=17% Similarity=0.178 Sum_probs=134.6
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
.+|++++|++.+++++..+|+.+..++.+|.+|...|++++|+++|+++++ .+|+++.+++++|.+|...|++++|
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~----~~p~~~~a~~~lg~~~~~~~~~~~A 84 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYIN----VQERDPKAHRFLGLLYELEENTDKA 84 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCchHHH
Confidence 789999999999999999999999999999999999999999999999999 6999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKA-FEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~-~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
+..|+++++++|+++.+++++|.+|...|++++|... ++++++++|+++.++...+.+....|+
T Consensus 85 ~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 85 VECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999999999887765 599999999999999999999998886
No 4
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.90 E-value=4.1e-22 Score=161.42 Aligned_cols=154 Identities=16% Similarity=0.224 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYN 226 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~ 226 (316)
.+..+|..+. ..|++++|++.|+++++.+|+++.++..+|.++...|++++|++.+++++. ..|+++.++.
T Consensus 7 iy~~lG~~~~-----~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~ 77 (184)
T 3vtx_A 7 IYMDIGDKKR-----TKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVV----LDTTSAEAYY 77 (184)
T ss_dssp HHHHHHHHHH-----HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCCHHHHH
T ss_pred HHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCchhHHHHH
Confidence 4455555555 899999999999999999999999999999999999999999999999999 6999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 227 ALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 227 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
.+|.++...+++++|++.++++++++|++..++..+|.+|..+|++++|++.|+++++++|+++.++.+++.++...|++
T Consensus 78 ~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~ 157 (184)
T 3vtx_A 78 ILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLR 157 (184)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 021175 307 KGV 309 (316)
Q Consensus 307 ~~A 309 (316)
++|
T Consensus 158 ~~A 160 (184)
T 3vtx_A 158 DEA 160 (184)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 5
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.89 E-value=4.1e-22 Score=166.60 Aligned_cols=144 Identities=14% Similarity=0.166 Sum_probs=140.4
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHc-----
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVRE----- 235 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~----- 235 (316)
...|++++|+..|+++++.+|+++.++.++|.++...|++++|+..++++++ .+|+++.++.++|.++...
T Consensus 16 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~----~~P~~~~a~~~lg~~~~~~~~~~~ 91 (217)
T 2pl2_A 16 YALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVA----RTPRYLGGYMVLSEAYVALYRQAE 91 (217)
T ss_dssp HHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHTCS
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHhhhhhh
Confidence 3899999999999999999999999999999999999999999999999999 6999999999999999999
Q ss_pred ------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 236 ------GKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 236 ------g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|++++|++.|+++++++|+++.+++++|.++..+|++++|+..|+++++++ +++.++.+++.++...|++++|
T Consensus 92 ~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A 170 (217)
T 2pl2_A 92 DRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEA 170 (217)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHH
T ss_pred hhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999998765
No 6
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.88 E-value=3.8e-22 Score=152.40 Aligned_cols=122 Identities=17% Similarity=0.283 Sum_probs=115.6
Q ss_pred HHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 021175 175 EQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG 254 (316)
Q Consensus 175 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 254 (316)
+...++|+.+.++.++|..+++.|+|++|+++|+++++ .+|.++.+++++|.++..+|++++|++.|+++++++|+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~ 79 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVK----RDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK 79 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh
Confidence 34458899999999999999999999999999999999 69999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 021175 255 YVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALK 300 (316)
Q Consensus 255 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~ 300 (316)
++.+++++|.++..+|++++|++.|+++++++|++.+++..++.+.
T Consensus 80 ~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 80 FIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998764
No 7
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.87 E-value=2.7e-20 Score=150.60 Aligned_cols=160 Identities=24% Similarity=0.286 Sum_probs=145.9
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVM 194 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 194 (316)
...|+.+.|...|+.+...+|... .++..+|..+. ..|++++|+..+++++...|+.+.++..+|.++
T Consensus 16 ~~~g~~~~A~~~~~~al~~~p~~~-------~~~~~la~~~~-----~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (184)
T 3vtx_A 16 RTKGDFDGAIRAYKKVLKADPNNV-------ETLLKLGKTYM-----DIGLPNDAIESLKKFVVLDTTSAEAYYILGSAN 83 (184)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHH-----HCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 456788888889997777777665 34444555555 899999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH
Q 021175 195 LRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKS 274 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 274 (316)
...+++++|.+.++++++ ..|.+..++..+|.++..+|++++|++.|+++++++|+++.+++++|.+|..+|++++
T Consensus 84 ~~~~~~~~a~~~~~~a~~----~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~ 159 (184)
T 3vtx_A 84 FMIDEKQAAIDALQRAIA----LNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDE 159 (184)
T ss_dssp HHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHH----hCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHH
Confidence 999999999999999999 6999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCh
Q 021175 275 ALKAFEEVLLFDPNNK 290 (316)
Q Consensus 275 A~~~~~~al~~~p~~~ 290 (316)
|+.+|+++++++|+++
T Consensus 160 A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 160 AVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHhCCccCH
Confidence 9999999999999764
No 8
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.86 E-value=7.6e-21 Score=172.17 Aligned_cols=173 Identities=6% Similarity=-0.033 Sum_probs=155.3
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRE-LDLSAKELQEQVRSGDASATEYFELGAVM 194 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 194 (316)
..++.+.|...++.+..+.+.... ++..+|..+. ..|+ +++|+..++++++.+|++..+|+++|.++
T Consensus 109 ~~g~~~~Al~~~~~al~l~P~~~~-------a~~~~g~~l~-----~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~ 176 (382)
T 2h6f_A 109 RDERSERAFKLTRDAIELNAANYT-------VWHFRRVLLK-----SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLV 176 (382)
T ss_dssp HTCCCHHHHHHHHHHHHHCTTCHH-------HHHHHHHHHH-----HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HCCChHHHHHHHHHHHHhCccCHH-------HHHHHHHHHH-----HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 456677888899877777777663 4444455554 7886 99999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-cCCHH
Q 021175 195 LRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEK-KKDLK 273 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~ 273 (316)
...|++++|+.+|+++++ ++|++..+|+++|.++..+|++++|+++|+++++++|++..+|+++|.++.. .|..+
T Consensus 177 ~~~g~~~eAl~~~~kal~----ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~ 252 (382)
T 2h6f_A 177 EWLRDPSQELEFIADILN----QDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYND 252 (382)
T ss_dssp HHHTCCTTHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCS
T ss_pred HHccCHHHHHHHHHHHHH----hCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcch
Confidence 999999999999999999 6999999999999999999999999999999999999999999999999999 56557
Q ss_pred HH-----HHHHHHHHhcCCCChhHHHHHHHHHhhCC
Q 021175 274 SA-----LKAFEEVLLFDPNNKVARPRRDALKDRVP 304 (316)
Q Consensus 274 ~A-----~~~~~~al~~~p~~~~a~~~l~~l~~~~~ 304 (316)
+| +.+|+++++++|++..+|.+++.++...|
T Consensus 253 eA~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~~~g 288 (382)
T 2h6f_A 253 RAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 (382)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHccC
Confidence 77 59999999999999999999999998877
No 9
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.85 E-value=5.8e-20 Score=153.96 Aligned_cols=172 Identities=16% Similarity=0.135 Sum_probs=146.6
Q ss_pred hccchHHHHHHHHHHhhhhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFEL-GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVM 194 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 194 (316)
..++...|...|+.+....+ ... ..+..+|..+. ..|++++|++.++++++.+|+++.++..+|.++
T Consensus 19 ~~~~~~~A~~~~~~al~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 19 NAKNYAVAFEKYSEYLKLTNNQDS-------VTAYNCGVCAD-----NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTCCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhccCCCCc-------HHHHHHHHHHH-----HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 55677778888886666654 322 12333444444 899999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhcCCCCccHH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--cHHHHHHHHHH
Q 021175 195 LRRKFYPAATKYLLQAIEKWDGDDQDLA-------QVYNALGVSYVREGKLDKGISQFETAVKLQPG--YVTAWNNLGDA 265 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~p~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~~lg~~ 265 (316)
...|++++|++.++++++ ..|+++ .++.++|.++...|++++|++.|+++++++|+ ++.+++++|.+
T Consensus 87 ~~~~~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~ 162 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIK----AVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVL 162 (228)
T ss_dssp HHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHH----HCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHH
Confidence 999999999999999999 577766 67999999999999999999999999999999 89999999999
Q ss_pred HHHcCCH---------------------------HHHHHHHHHHHhcCCCChhHHHHHHHHHhhC
Q 021175 266 YEKKKDL---------------------------KSALKAFEEVLLFDPNNKVARPRRDALKDRV 303 (316)
Q Consensus 266 ~~~~g~~---------------------------~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~ 303 (316)
|...|+. ++|+.+|+++++++|+++.+...++.+...+
T Consensus 163 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~l~p~~~~~~~~l~~i~~~~ 227 (228)
T 4i17_A 163 FYNNGADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVTLSPNRTEIKQMQDQVKAMI 227 (228)
T ss_dssp HHHHHHHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhh
Confidence 9999988 8999999999999999999999998887653
No 10
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.85 E-value=8.2e-21 Score=171.96 Aligned_cols=154 Identities=11% Similarity=0.041 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC-hHHHHHHHHHHHHhcCCCCccHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKF-YPAATKYLLQAIEKWDGDDQDLAQVY 225 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-~~~A~~~~~~al~~~~~~~p~~~~~~ 225 (316)
++..++..+. ..|++++|++.++++++.+|++..+|+++|.++...|+ +++|+++|+++++ .+|++..+|
T Consensus 99 a~~~lg~~~~-----~~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~----l~P~~~~a~ 169 (382)
T 2h6f_A 99 VYDYFRAVLQ-----RDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIE----EQPKNYQVW 169 (382)
T ss_dssp HHHHHHHHHH-----HTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH----HCTTCHHHH
T ss_pred HHHHHHHHHH-----HCCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHH----HCCCCHHHH
Confidence 3444444444 78999999999999999999999999999999999997 9999999999999 699999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhC-C
Q 021175 226 NALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRV-P 304 (316)
Q Consensus 226 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~-~ 304 (316)
+++|.++..+|++++|++.|+++++++|++..+|+++|.++..+|++++|+.+|+++++++|++..+|.+++.++..+ |
T Consensus 170 ~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~ 249 (382)
T 2h6f_A 170 HHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTG 249 (382)
T ss_dssp HHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999994 4
Q ss_pred CCCCC
Q 021175 305 LYKGV 309 (316)
Q Consensus 305 ~~~~A 309 (316)
..++|
T Consensus 250 ~~~eA 254 (382)
T 2h6f_A 250 YNDRA 254 (382)
T ss_dssp SCSHH
T ss_pred cchHH
Confidence 43544
No 11
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.85 E-value=4.8e-20 Score=154.45 Aligned_cols=142 Identities=15% Similarity=0.188 Sum_probs=136.0
Q ss_pred HHhhhHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 161 LVRRELDLSAKELQEQVRSGD-ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
...|++++|++.|+++++.+| .+..+++++|.++...|++++|+++++++++ .+|++..++.++|.++..+|+++
T Consensus 18 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~~~~~ 93 (228)
T 4i17_A 18 LNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIK----KNYNLANAYIGKSAAYRDMKNNQ 93 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCSHHHHHHHHHHHHHHTTCHH
T ss_pred HHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHH----hCcchHHHHHHHHHHHHHcccHH
Confidence 389999999999999999999 8999999999999999999999999999999 79999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--ChhHHHHHHHHHhhCCCC
Q 021175 240 KGISQFETAVKLQPGYV-------TAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN--NKVARPRRDALKDRVPLY 306 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~-------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~~a~~~l~~l~~~~~~~ 306 (316)
+|++.++++++++|+++ .+++++|.++...|++++|+..|+++++++|+ +..++.+++.++...|+.
T Consensus 94 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 94 EYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 67999999999999999999999999999999 999999999998776654
No 12
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.84 E-value=1.8e-19 Score=161.24 Aligned_cols=148 Identities=17% Similarity=0.235 Sum_probs=117.0
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC-------------------------
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG------------------------- 216 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~------------------------- 216 (316)
..|++++|++.|+++++.+|+++.++.++|.++...|++++|+++++++++..+.
T Consensus 111 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~ 190 (365)
T 4eqf_A 111 ENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDS 190 (365)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CC
T ss_pred HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhh
Confidence 5555555555555555555555555555555555555555555555555542110
Q ss_pred ---------------CCcc--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Q 021175 217 ---------------DDQD--LAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAF 279 (316)
Q Consensus 217 ---------------~~p~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 279 (316)
..|. ++.++.++|.++...|++++|++.|+++++.+|+++.++.++|.++...|++++|+.+|
T Consensus 191 g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 270 (365)
T 4eqf_A 191 SVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAY 270 (365)
T ss_dssp HHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 3455 78899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 280 EEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 280 ~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+++++++|++..++..++.++...|++++|
T Consensus 271 ~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 300 (365)
T 4eqf_A 271 TRALEIQPGFIRSRYNLGISCINLGAYREA 300 (365)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCHHH
T ss_pred HHHHhcCCCchHHHHHHHHHHHHCCCHHHH
Confidence 999999999999999999999999998765
No 13
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.84 E-value=2.2e-19 Score=162.13 Aligned_cols=144 Identities=16% Similarity=0.198 Sum_probs=94.6
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|+..++++++.+|+++.++.++|.++...|++++|++.|+++++ .+|+++.++.++|.++...|++++|
T Consensus 215 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A 290 (388)
T 1w3b_A 215 EARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIE----LQPHFPDAYCNLANALKEKGSVAEA 290 (388)
T ss_dssp TTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TCSSCHHHHHHHHHHHHHHSCHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----hCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 556666666666666666666666666666666666666666666666666 4666666666666666666666666
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++.|+++++.+|+++.++.++|.++...|++++|+..++++++.+|++..++..++.++...|++++|
T Consensus 291 ~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 358 (388)
T 1w3b_A 291 EDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEA 358 (388)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHH
Confidence 66666666666666666666666666666666666666666666666666666666666666666543
No 14
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.84 E-value=2.5e-19 Score=161.81 Aligned_cols=177 Identities=19% Similarity=0.274 Sum_probs=153.6
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 021175 117 ASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLR 196 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 196 (316)
.++.+.|...|+.+....+... .++..++..+. ..|++++|++.|+++++.+|+...++.++|.++..
T Consensus 148 ~g~~~~A~~~~~~al~~~p~~~-------~~~~~l~~~~~-----~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 215 (388)
T 1w3b_A 148 LGRLEEAKACYLKAIETQPNFA-------VAWSNLGCVFN-----AQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKE 215 (388)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 4556666666665544444433 23333444444 88999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH
Q 021175 197 RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSAL 276 (316)
Q Consensus 197 ~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~ 276 (316)
.|++++|+..++++++ .+|+++.++.++|.++...|++++|++.|+++++.+|+++.++.++|.++...|++++|+
T Consensus 216 ~~~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 291 (388)
T 1w3b_A 216 ARIFDRAVAAYLRALS----LSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAE 291 (388)
T ss_dssp TTCTTHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHH
T ss_pred cCCHHHHHHHHHHHHh----hCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 9999999999999999 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 277 KAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 277 ~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
..|+++++.+|++..++..++.++...|++++|
T Consensus 292 ~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 324 (388)
T 1w3b_A 292 DCYNTALRLCPTHADSLNNLANIKREQGNIEEA 324 (388)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999988654
No 15
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=4.6e-19 Score=149.98 Aligned_cols=181 Identities=14% Similarity=0.140 Sum_probs=132.2
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC-------HHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS-------ATEYF 188 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-------~~~~~ 188 (316)
..++...|...++.+.... ... .++..++..+. ..|++++|++.++++++.+|+. +.++.
T Consensus 17 ~~~~~~~A~~~~~~a~~~~-~~~-------~~~~~~~~~~~-----~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~ 83 (258)
T 3uq3_A 17 KARQFDEAIEHYNKAWELH-KDI-------TYLNNRAAAEY-----EKGEYETAISTLNDAVEQGREMRADYKVISKSFA 83 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHS-CCT-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhh-ccH-------HHHHHHHHHHH-----HcccHHHHHHHHHHHHHhCcccccchHHHHHHHH
Confidence 3455566666666444443 221 22333333343 6777888888888887777655 67777
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhcCC----------------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 021175 189 ELGAVMLRRKFYPAATKYLLQAIEKWDG----------------------DDQDLAQVYNALGVSYVREGKLDKGISQFE 246 (316)
Q Consensus 189 ~lg~~~~~~g~~~~A~~~~~~al~~~~~----------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 246 (316)
.+|.++...|++++|+++++++++..+. .+|.++.++..+|.++...|++++|++.++
T Consensus 84 ~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 163 (258)
T 3uq3_A 84 RIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYT 163 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 8888888888888888888777774322 467777888888888888888888888888
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 247 TAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 247 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++++.+|+++.++.++|.++...|++++|+.+++++++.+|+++.++..++.++...|++++|
T Consensus 164 ~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 164 EMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 888888888888888888888888888888888888888888888888888888888877554
No 16
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.83 E-value=1.6e-20 Score=147.82 Aligned_cols=122 Identities=14% Similarity=0.078 Sum_probs=114.6
Q ss_pred hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHH
Q 021175 165 ELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQ 244 (316)
Q Consensus 165 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 244 (316)
++-.+-..++++++.+|+++.+++++|.++...|++++|+.+|+++++ .+|+++.+|+++|.++..+|++++|++.
T Consensus 17 ~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~----~~P~~~~~~~~lg~~~~~~g~~~~Ai~~ 92 (151)
T 3gyz_A 17 DAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCI----YDFYNVDYIMGLAAIYQIKEQFQQAADL 92 (151)
T ss_dssp HHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHccHHHHHHH
Confidence 333444567778889999999999999999999999999999999999 6999999999999999999999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Q 021175 245 FETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNK 290 (316)
Q Consensus 245 ~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 290 (316)
|+++++++|+++.+++++|.+|..+|++++|+.+|++++++.|+.+
T Consensus 93 ~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 93 YAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 9999999999999999999999999999999999999999999865
No 17
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.83 E-value=5.3e-20 Score=171.56 Aligned_cols=178 Identities=11% Similarity=0.123 Sum_probs=160.1
Q ss_pred hhccch-HHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 021175 115 ANASEN-VQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAV 193 (316)
Q Consensus 115 ~~~~~~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 193 (316)
...++. +.|...|+.+....+... .++..+|..+. ..|++++|++.|+++++.+|+ ..++.++|.+
T Consensus 113 ~~~g~~~~~A~~~~~~al~~~p~~~-------~a~~~lg~~~~-----~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~ 179 (474)
T 4abn_A 113 NVTPDYSPEAEVLLSKAVKLEPELV-------EAWNQLGEVYW-----KKGDVTSAHTCFSGALTHCKN-KVSLQNLSMV 179 (474)
T ss_dssp TSSSSCCHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHH
Confidence 445677 888889987777766654 34445555555 899999999999999999999 7999999999
Q ss_pred HHHc---------CChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHHhCC---
Q 021175 194 MLRR---------KFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVRE--------GKLDKGISQFETAVKLQP--- 253 (316)
Q Consensus 194 ~~~~---------g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~--------g~~~~A~~~~~~al~~~p--- 253 (316)
+... |++++|+++|+++++ .+|+++.+++++|.+|... |++++|++.|+++++++|
T Consensus 180 ~~~~~~~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 255 (474)
T 4abn_A 180 LRQLQTDSGDEHSRHVMDSVRQAKLAVQ----MDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKAS 255 (474)
T ss_dssp HTTCCCSCHHHHHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGG
T ss_pred HHHhccCChhhhhhhHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcc
Confidence 9999 999999999999999 6999999999999999999 999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 254 GYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 254 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+++.+++++|.+|..+|++++|+.+|+++++++|+++.++..++.++..+|++++|
T Consensus 256 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 256 SNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp GCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888876544
No 18
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.83 E-value=1e-19 Score=176.99 Aligned_cols=158 Identities=15% Similarity=0.183 Sum_probs=145.0
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVM 194 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 194 (316)
...++.++|...|+.+..+.+... .++..+|..+. ..|++++|++.|+++++.+|+++.+++++|.++
T Consensus 20 ~~~G~~~eAi~~~~kAl~l~P~~~-------~a~~nLg~~l~-----~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l 87 (723)
T 4gyw_A 20 REQGNIEEAVRLYRKALEVFPEFA-------AAHSNLASVLQ-----QQGKLQEALMHYKEAIRISPTFADAYSNMGNTL 87 (723)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 466788888889998777777765 34555566665 899999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH
Q 021175 195 LRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKS 274 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 274 (316)
..+|++++|+++|+++++ ++|+++.+++++|.+|..+|++++|++.|+++++++|+++.++.++|.++..+|++++
T Consensus 88 ~~~g~~~~A~~~~~kAl~----l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~ 163 (723)
T 4gyw_A 88 KEMQDVQGALQCYTRAIQ----INPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTD 163 (723)
T ss_dssp HHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTT
T ss_pred HHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHH
Confidence 999999999999999999 6999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC
Q 021175 275 ALKAFEEVLLFDPN 288 (316)
Q Consensus 275 A~~~~~~al~~~p~ 288 (316)
|.+.+++++++.|+
T Consensus 164 A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 164 YDERMKKLVSIVAD 177 (723)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChh
Confidence 99999999987654
No 19
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.82 E-value=3.5e-19 Score=149.63 Aligned_cols=144 Identities=18% Similarity=0.216 Sum_probs=126.5
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|+..++++++.+|+...++..+|.++...|++++|+++++++++ ..|.+..++..+|.++...|++++|
T Consensus 69 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A 144 (243)
T 2q7f_A 69 SVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALR----AGMENGDLFYMLGTVLVKLEQPKLA 144 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTCCSHHHHHHHHHHHHHTSCHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHhccHHHH
Confidence 788888888888888888888888888888888888899999988888888 5777888888888888888899999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++.++++++.+|++..++..+|.++...|++++|+..++++++.+|++..++..++.++...|++++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 212 (243)
T 2q7f_A 145 LPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKA 212 (243)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHH
T ss_pred HHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHH
Confidence 99998888888888888888888888888888888888888888888888888888888888888765
No 20
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.82 E-value=2.1e-18 Score=146.04 Aligned_cols=180 Identities=15% Similarity=0.125 Sum_probs=156.7
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++.+.|...++.+....+... .++..++..+. ..|++++|++.++++++.+|++..++..+|.++.
T Consensus 49 ~~~~~~~A~~~~~~al~~~~~~~-------~~~~~la~~~~-----~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~ 116 (252)
T 2ho1_A 49 QRGNTEQAKVPLRKALEIDPSSA-------DAHAALAVVFQ-----TEMEPKLADEEYRKALASDSRNARVLNNYGGFLY 116 (252)
T ss_dssp HTTCTGGGHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCChH-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHH
Confidence 44566666668876655554443 23334444444 8999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSA 275 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 275 (316)
..|++++|+++++++++ ....|.+..++..+|.++...|++++|++.++++++.+|++..++..+|.++...|++++|
T Consensus 117 ~~g~~~~A~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 194 (252)
T 2ho1_A 117 EQKRYEEAYQRLLEASQ--DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPA 194 (252)
T ss_dssp HTTCHHHHHHHHHHHTT--CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhHHHHHHHHHHHHHh--CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999998 1137889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 276 LKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 276 ~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
...++++++.+|++...+..++.++...|++++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A 228 (252)
T 2ho1_A 195 RQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTA 228 (252)
T ss_dssp HHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHH
Confidence 9999999999999999999999999999988755
No 21
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.82 E-value=3.1e-20 Score=145.78 Aligned_cols=132 Identities=9% Similarity=0.017 Sum_probs=121.3
Q ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 021175 170 AKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAV 249 (316)
Q Consensus 170 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 249 (316)
...++++++.+|++..+++++|.++...|++++|+..|+++++ .+|+++.+++++|.++...|++++|++.|++++
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 82 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCV----LDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGA 82 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHH----cCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3467889999999999999999999999999999999999999 699999999999999999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 250 KLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 250 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
+++|+++.+++++|.+|..+|++++|+.+|+++++++|+++........+...+..
T Consensus 83 ~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~ 138 (148)
T 2vgx_A 83 VMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEA 138 (148)
T ss_dssp HHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHH
T ss_pred hcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988776655555544443
No 22
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.82 E-value=3.7e-19 Score=147.53 Aligned_cols=136 Identities=14% Similarity=0.190 Sum_probs=118.1
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHH----------------HHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFE----------------LGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQ 223 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~----------------lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~ 223 (316)
.+..|++++|+..|+++++.+|+++.+++. +|.++...|++++|+..|+++++ .+|+++.
T Consensus 14 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~ 89 (208)
T 3urz_A 14 AIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ----KAPNNVD 89 (208)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHH
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----HCCCCHH
Confidence 348999999999999999999999999999 99999999999999999999999 6999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH-----------------------------------
Q 021175 224 VYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEK----------------------------------- 268 (316)
Q Consensus 224 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----------------------------------- 268 (316)
+++++|.++...|++++|++.|+++++++|+++.+++++|.+|..
T Consensus 90 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~ 169 (208)
T 3urz_A 90 CLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLF 169 (208)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888888877643
Q ss_pred cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 021175 269 KKDLKSALKAFEEVLLFDPNNKVARPRRDALK 300 (316)
Q Consensus 269 ~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~ 300 (316)
.|++++|+.+|+++++++|+. ++...+..+.
T Consensus 170 ~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i~ 200 (208)
T 3urz_A 170 TTRYEKARNSLQKVILRFPST-EAQKTLDKIL 200 (208)
T ss_dssp HHTHHHHHHHHHHHTTTSCCH-HHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCH-HHHHHHHHHH
Confidence 356789999999999999974 3444455543
No 23
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.82 E-value=4.7e-18 Score=140.71 Aligned_cols=180 Identities=12% Similarity=0.023 Sum_probs=156.3
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++.+.|...++.+....+... .++..++..+. ..|++++|++.++++++.+|++..++..+|.++.
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~~-------~~~~~l~~~~~-----~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~ 87 (225)
T 2vq2_A 20 RGQDYRQATASIEDALKSDPKNE-------LAWLVRAEIYQ-----YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLC 87 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCccch-------HHHHHHHHHHH-----HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 45667777778876655555443 23333444444 8999999999999999999999999999999999
Q ss_pred Hc-CChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH
Q 021175 196 RR-KFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKS 274 (316)
Q Consensus 196 ~~-g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 274 (316)
.. |++++|+++++++++ .+ ..|.+..++.++|.++...|++++|++.++++++.+|++..++..+|.++...|++++
T Consensus 88 ~~~~~~~~A~~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~ 165 (225)
T 2vq2_A 88 GRLNRPAESMAYFDKALA-DP-TYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGD 165 (225)
T ss_dssp TTTCCHHHHHHHHHHHHT-ST-TCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HhcCcHHHHHHHHHHHHc-Cc-CCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHH
Confidence 99 999999999999998 22 3788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC-CChhHHHHHHHHHhhCCCCCCC
Q 021175 275 ALKAFEEVLLFDP-NNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 275 A~~~~~~al~~~p-~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|...++++++.+| ++...+..+..++...|+.+++
T Consensus 166 A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 201 (225)
T 2vq2_A 166 ADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQAA 201 (225)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHHHH
Confidence 9999999999999 9999999999998888887543
No 24
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.81 E-value=6.7e-19 Score=141.16 Aligned_cols=145 Identities=16% Similarity=0.183 Sum_probs=137.4
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..++++++.+|+++.++..+|.++...|++++|+++++++++ ..|.+..++..+|.++...|++++
T Consensus 19 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~ 94 (186)
T 3as5_A 19 AKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLA----DAPDNVKVATVLGLTYVQVQKYDL 94 (186)
T ss_dssp HHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHhcCHHH
Confidence 3889999999999999999999999999999999999999999999999999 588889999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|++.++++++.+|++..++..+|.++...|++++|+.+++++++.+|+++.++..++.++...|++++|
T Consensus 95 A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 163 (186)
T 3as5_A 95 AVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA 163 (186)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988654
No 25
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.81 E-value=1.5e-18 Score=152.14 Aligned_cols=147 Identities=14% Similarity=0.173 Sum_probs=120.8
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC-----CccHHHHHHHHHHHHHHc
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD-----DQDLAQVYNALGVSYVRE 235 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-----~p~~~~~~~~lg~~~~~~ 235 (316)
...|++++|++.++++++.+|+++.++..+|.++...|++++|+++++++++..+.. .|..+.++.++|.++...
T Consensus 170 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 249 (330)
T 3hym_B 170 GLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKL 249 (330)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHT
T ss_pred HHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHh
Confidence 378888888888888888888888888888888888888888888888888864321 155677888888888888
Q ss_pred CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHH-hhCCCCC
Q 021175 236 GKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALK-DRVPLYK 307 (316)
Q Consensus 236 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~-~~~~~~~ 307 (316)
|++++|++.++++++.+|++..++.++|.++...|++++|..+|+++++++|+++.++..++.++ ...|+.+
T Consensus 250 g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~g~~~ 322 (330)
T 3hym_B 250 KKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSE 322 (330)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCCHHHHHHHHHHHHTTTTC--
T ss_pred cCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCchHHHHHHHHHHHHHhCchh
Confidence 88888888888888888888888888888888888888888888888888888888888888877 4555543
No 26
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.81 E-value=3.5e-18 Score=152.55 Aligned_cols=144 Identities=16% Similarity=0.182 Sum_probs=139.0
Q ss_pred HhhhHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 162 VRRELDLSAKELQEQVRSGDA--SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
..|++++|+..++++++.+|+ .+.++..+|.++...|++++|+++++++++ .+|+++.++.++|.++...|+++
T Consensus 193 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~~~~~~~~~~l~~~~~~~g~~~ 268 (368)
T 1fch_A 193 SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALS----VRPNDYLLWNKLGATLANGNQSE 268 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCcCCHHHHHHHHHHHHHcCCHH
Confidence 688999999999999999999 899999999999999999999999999999 58999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----------hhHHHHHHHHHhhCCCCCC
Q 021175 240 KGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN-----------KVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----------~~a~~~l~~l~~~~~~~~~ 308 (316)
+|++.|+++++++|++..+++++|.+|...|++++|+.+|+++++++|++ ..++..++.++..+|++++
T Consensus 269 ~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 348 (368)
T 1fch_A 269 EAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDA 348 (368)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHh
Confidence 99999999999999999999999999999999999999999999999988 8999999999999999987
Q ss_pred C
Q 021175 309 V 309 (316)
Q Consensus 309 A 309 (316)
|
T Consensus 349 A 349 (368)
T 1fch_A 349 Y 349 (368)
T ss_dssp H
T ss_pred H
Confidence 6
No 27
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.81 E-value=2.8e-18 Score=144.13 Aligned_cols=173 Identities=21% Similarity=0.364 Sum_probs=148.8
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++.+.|...++.+....+... .++..++..+. ..|++++|++.++++++.+|+++.++..+|.++.
T Consensus 69 ~~~~~~~A~~~~~~~~~~~~~~~-------~~~~~la~~~~-----~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 136 (243)
T 2q7f_A 69 SVNELERALAFYDKALELDSSAA-------TAYYGAGNVYV-----VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLV 136 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCcch-------HHHHHHHHHHH-----HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 45667777778876655555443 23333344444 8999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSA 275 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 275 (316)
..|++++|+++++++++ ..|.+..++..+|.++...|++++|++.++++++.+|++..++..+|.+|...|++++|
T Consensus 137 ~~~~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 212 (243)
T 2q7f_A 137 KLEQPKLALPYLQRAVE----LNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKA 212 (243)
T ss_dssp HTSCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHH
T ss_pred HhccHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHH
Confidence 99999999999999999 58889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCChhHHHHHHHHHhhCC
Q 021175 276 LKAFEEVLLFDPNNKVARPRRDALKDRVP 304 (316)
Q Consensus 276 ~~~~~~al~~~p~~~~a~~~l~~l~~~~~ 304 (316)
..+++++++++|+++.++..++.+....+
T Consensus 213 ~~~~~~~~~~~p~~~~~~~~~~~l~~~~~ 241 (243)
T 2q7f_A 213 LEMLDKAIDIQPDHMLALHAKKLLGHHHH 241 (243)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHTC------
T ss_pred HHHHHHHHccCcchHHHHHHHHHHHhhcc
Confidence 99999999999999999999887766544
No 28
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.81 E-value=1.6e-19 Score=175.55 Aligned_cols=141 Identities=16% Similarity=0.056 Sum_probs=133.2
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|++.++++++.+|+++.+++++|.++...|++++|++.|+++++ .+|+++.+++++|.++..+|++++
T Consensus 444 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~----l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 444 LDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLD----TFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp HHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred HhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHcCChHH
Confidence 3899999999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
++.|+++++++|++..+++++|.++..+|++++|++.|+++++++|++..++.+++.++...++.
T Consensus 520 -~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~~~~~ 584 (681)
T 2pzi_A 520 -HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLSGRST 584 (681)
T ss_dssp -TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-----
T ss_pred -HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHccCCC
Confidence 99999999999999999999999999999999999999999999999999999999998666553
No 29
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.7e-18 Score=145.22 Aligned_cols=176 Identities=14% Similarity=0.132 Sum_probs=146.3
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH----------------
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVR---------------- 178 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~---------------- 178 (316)
...++.+.|...++.+....+...........++..++..+. ..|++++|+..++++++
T Consensus 49 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~ 123 (258)
T 3uq3_A 49 YEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYH-----KLGDLKKTIEYYQKSLTEHRTADILTKLRNAEK 123 (258)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHH-----HcccHHHHHHHHHHHHhcCchhHHHHHHhHHHH
Confidence 355677777778876665555442111111234444455544 77778888888877777
Q ss_pred ----------cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 021175 179 ----------SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETA 248 (316)
Q Consensus 179 ----------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 248 (316)
.+|+.+.++..+|.++...|++++|+++++++++ ..|.++.++.++|.++...|++++|++.++++
T Consensus 124 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 199 (258)
T 3uq3_A 124 ELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNKA 199 (258)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCcccHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 7788889999999999999999999999999999 58899999999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC------CCChhHHHHHHHH
Q 021175 249 VKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFD------PNNKVARPRRDAL 299 (316)
Q Consensus 249 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~l~~l 299 (316)
++.+|+++.++..+|.++...|++++|..+++++++++ |++..++..+..+
T Consensus 200 l~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 200 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999 9888888877654
No 30
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.81 E-value=4.2e-18 Score=152.06 Aligned_cols=182 Identities=16% Similarity=0.157 Sum_probs=142.0
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++...|...++.+....+... .++..+|..+. ..|++++|+..++++++.+|+++.++..+|.++.
T Consensus 76 ~~g~~~~A~~~~~~al~~~p~~~-------~~~~~l~~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~ 143 (368)
T 1fch_A 76 QEGDLPNAVLLFEAAVQQDPKHM-------EAWQYLGTTQA-----ENEQELLAISALRRCLELKPDNQTALMALAVSFT 143 (368)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHH-----HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 34455566666665554444433 12233333333 6777777777777777777777777777777777
Q ss_pred HcCChHHHHHHHHHHHHhcCC---------------------------------------------CCcc--HHHHHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDG---------------------------------------------DDQD--LAQVYNAL 228 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~---------------------------------------------~~p~--~~~~~~~l 228 (316)
..|++++|++.++++++..+. ..|. ++.++.++
T Consensus 144 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l 223 (368)
T 1fch_A 144 NESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGL 223 (368)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHH
Confidence 777777777777766663221 2444 68899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCC
Q 021175 229 GVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 229 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~ 308 (316)
|.++...|++++|++.++++++.+|+++.+++++|.++...|++++|+..|+++++++|++..++..++.++...|++++
T Consensus 224 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~ 303 (368)
T 1fch_A 224 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHRE 303 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C
Q 021175 309 V 309 (316)
Q Consensus 309 A 309 (316)
|
T Consensus 304 A 304 (368)
T 1fch_A 304 A 304 (368)
T ss_dssp H
T ss_pred H
Confidence 5
No 31
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.81 E-value=6.2e-18 Score=149.67 Aligned_cols=178 Identities=8% Similarity=0.051 Sum_probs=155.8
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++...|...++.+....+... .++...+..+. ..|++++|+..++++++.+|++..++..+|.++.
T Consensus 15 ~~g~~~~A~~~~~~~l~~~p~~~-------~~~~~~a~~~~-----~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 82 (359)
T 3ieg_A 15 AAGQLADALSQFHAAVDGDPDNY-------IAYYRRATVFL-----AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLL 82 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCcccH-------HHHHHHHHHHH-----HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHH
Confidence 45677777778886666655543 23344444444 8999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCc---cHHHHHHHH------------HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQ---DLAQVYNAL------------GVSYVREGKLDKGISQFETAVKLQPGYVTAWN 260 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p---~~~~~~~~l------------g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 260 (316)
..|++++|++.++++++ ..| ++..++..+ |.++...|++++|++.++++++.+|+++.++.
T Consensus 83 ~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 158 (359)
T 3ieg_A 83 KQGKLDEAEDDFKKVLK----SNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRE 158 (359)
T ss_dssp HHTCHHHHHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HcCChHHHHHHHHHHHh----cCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHH
Confidence 99999999999999999 688 888888877 78999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 261 NLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 261 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
.+|.++...|++++|+..++++++.+|+++.++..++.++...|++++|
T Consensus 159 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 207 (359)
T 3ieg_A 159 LRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELS 207 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999988654
No 32
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.80 E-value=3.3e-19 Score=166.22 Aligned_cols=153 Identities=18% Similarity=0.183 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRREL-DLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVY 225 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~ 225 (316)
.+...|..+. ..|++ ++|++.|+++++.+|+++.+++++|.++...|++++|+++|+++++ .+|+ ..++
T Consensus 104 ~~~~lg~~~~-----~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~-~~~~ 173 (474)
T 4abn_A 104 ALMLKGKALN-----VTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALT----HCKN-KVSL 173 (474)
T ss_dssp HHHHHHHHHT-----SSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT----TCCC-HHHH
T ss_pred HHHHHHHHHH-----hccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----hCCC-HHHH
Confidence 3444444444 89999 9999999999999999999999999999999999999999999999 6888 6999
Q ss_pred HHHHHHHHHc---------CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhcCC-
Q 021175 226 NALGVSYVRE---------GKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKK--------KDLKSALKAFEEVLLFDP- 287 (316)
Q Consensus 226 ~~lg~~~~~~---------g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~--------g~~~~A~~~~~~al~~~p- 287 (316)
.++|.++... |++++|++.|+++++++|+++.+++++|.+|... |++++|+.+|+++++++|
T Consensus 174 ~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~ 253 (474)
T 4abn_A 174 QNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRK 253 (474)
T ss_dssp HHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCC
Confidence 9999999999 9999999999999999999999999999999999 999999999999999999
Q ss_pred --CChhHHHHHHHHHhhCCCCCCC
Q 021175 288 --NNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 288 --~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+++.++.+++.++...|++++|
T Consensus 254 ~~~~~~~~~~lg~~~~~~g~~~~A 277 (474)
T 4abn_A 254 ASSNPDLHLNRATLHKYEESYGEA 277 (474)
T ss_dssp GGGCHHHHHHHHHHHHHTTCHHHH
T ss_pred cccCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999998765
No 33
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.80 E-value=1.2e-18 Score=155.85 Aligned_cols=184 Identities=11% Similarity=0.055 Sum_probs=148.4
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHH---HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCC--CHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLL---LLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDA--SATEYFE 189 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~--~~~~~~~ 189 (316)
...++.+.|...++.+....+......... ......++.. +...|++++|++.++++++.+|+ ++.++.+
T Consensus 144 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~-----~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ 218 (365)
T 4eqf_A 144 TNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKS-----PVDSSVLEGVKELYLEAAHQNGDMIDPDLQTG 218 (365)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHCC------------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHH
T ss_pred HccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHhCcCccCHHHHHH
Confidence 345566666666665544444332111110 0111112223 33789999999999999999999 8999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 021175 190 LGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKK 269 (316)
Q Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 269 (316)
+|.++...|++++|+++|+++++ ..|+++.++.++|.++...|++++|++.|+++++++|+++.+++++|.+|..+
T Consensus 219 l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 294 (365)
T 4eqf_A 219 LGVLFHLSGEFNRAIDAFNAALT----VRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINL 294 (365)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHC
Confidence 99999999999999999999999 58999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCC------------ChhHHHHHHHHHhhCCCCC
Q 021175 270 KDLKSALKAFEEVLLFDPN------------NKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 270 g~~~~A~~~~~~al~~~p~------------~~~a~~~l~~l~~~~~~~~ 307 (316)
|++++|+.+|+++++++|+ +..++..++.++...|+.+
T Consensus 295 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 344 (365)
T 4eqf_A 295 GAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPE 344 (365)
T ss_dssp TCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHH
T ss_pred CCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHH
Confidence 9999999999999999987 3678899999988888765
No 34
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.80 E-value=3e-18 Score=150.29 Aligned_cols=178 Identities=14% Similarity=0.076 Sum_probs=157.2
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++...|...++.+....+...... ...+.. +...|++++|+..++++++.+|+++.++..+|.++.
T Consensus 34 ~~g~~~~A~~~~~~~l~~~p~~~~~~-------~~~~~~-----~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 101 (330)
T 3hym_B 34 YNCDFKMCYKLTSVVMEKDPFHASCL-------PVHIGT-----LVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYL 101 (330)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTTTH-------HHHHHH-----HHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCChhhH-------HHHHHH-----HHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 34677777778876655555443221 111222 237899999999999999999999999999999999
Q ss_pred HcC-ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH
Q 021175 196 RRK-FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKS 274 (316)
Q Consensus 196 ~~g-~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 274 (316)
..| ++++|+++++++++ .+|.++.++..+|.++...|++++|++.++++++.+|++..++..+|.++...|++++
T Consensus 102 ~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~ 177 (330)
T 3hym_B 102 MVGHKNEHARRYLSKATT----LEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKL 177 (330)
T ss_dssp HSCSCHHHHHHHHHHHHT----TCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHH
T ss_pred HhhhhHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHH
Confidence 999 99999999999999 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 275 ALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 275 A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|+..++++++.+|+++.++..++.++...|++++|
T Consensus 178 A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A 212 (330)
T 3hym_B 178 AERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTA 212 (330)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHH
Confidence 99999999999999999999999999999998755
No 35
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.80 E-value=2.8e-18 Score=142.10 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=139.0
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHc-CCHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVRE-GKLD 239 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~-g~~~ 239 (316)
...|++++|++.++++++.+|+++.++..+|.++...|++++|+++++++++ ..|.+..++..+|.++... |+++
T Consensus 19 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~ 94 (225)
T 2vq2_A 19 MRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALS----IKPDSAEINNNYGWFLCGRLNRPA 94 (225)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHTTTCCHH
T ss_pred HHHhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHhcCcHH
Confidence 3899999999999999999999999999999999999999999999999999 5888999999999999999 9999
Q ss_pred HHHHHHHHHHH--hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 240 KGISQFETAVK--LQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 240 ~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+|++.++++++ .+|.+..+++.+|.++...|++++|+..++++++.+|++..++..++.++...|++++|
T Consensus 95 ~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 166 (225)
T 2vq2_A 95 ESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDA 166 (225)
T ss_dssp HHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHH
Confidence 99999999999 77788999999999999999999999999999999999999999999999999998755
No 36
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.79 E-value=1.2e-18 Score=149.01 Aligned_cols=144 Identities=16% Similarity=0.136 Sum_probs=131.7
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH--
Q 021175 160 VLVRRELDLSAKELQEQVRSGDAS---ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR-- 234 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~-- 234 (316)
++..|++++|+..|+++++.+|++ +.+++.+|.++...|++++|+..|+++++..|. +|..+.+++.+|.++..
T Consensus 25 ~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~ 103 (261)
T 3qky_A 25 FYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQI-DPRVPQAEYERAMCYYKLS 103 (261)
T ss_dssp HHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHC
T ss_pred HHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCC-CchhHHHHHHHHHHHHHhc
Confidence 348999999999999999999998 999999999999999999999999999996542 55778999999999999
Q ss_pred ------cCCHHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhcCCCC--
Q 021175 235 ------EGKLDKGISQFETAVKLQPGYVTAW-----------------NNLGDAYEKKKDLKSALKAFEEVLLFDPNN-- 289 (316)
Q Consensus 235 ------~g~~~~A~~~~~~al~~~p~~~~~~-----------------~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-- 289 (316)
.|++++|++.|+++++.+|++..+. +.+|.+|...|++++|+..|+++++..|++
T Consensus 104 ~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~ 183 (261)
T 3qky_A 104 PPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPW 183 (261)
T ss_dssp CCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT
T ss_pred ccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCch
Confidence 9999999999999999999986555 899999999999999999999999999984
Q ss_pred -hhHHHHHHHHHhhCC
Q 021175 290 -KVARPRRDALKDRVP 304 (316)
Q Consensus 290 -~~a~~~l~~l~~~~~ 304 (316)
+.++..++.++..+|
T Consensus 184 ~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 184 ADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhc
Confidence 568899999888773
No 37
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.79 E-value=3.2e-19 Score=138.66 Aligned_cols=129 Identities=11% Similarity=0.050 Sum_probs=117.7
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 171 KELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 171 ~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
..++++++.+|++...++.+|..+...|++++|+..|+++++ .+|+++.+++++|.++...|++++|++.|+++++
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCM----LDHYDARYFLGLGACRQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 467788889999999999999999999999999999999999 6999999999999999999999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhC
Q 021175 251 LQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRV 303 (316)
Q Consensus 251 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~ 303 (316)
++|+++.+++++|.++..+|++++|+.+|+++++++|+++........+...+
T Consensus 81 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l 133 (142)
T 2xcb_A 81 MDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAML 133 (142)
T ss_dssp HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988777666555443
No 38
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.79 E-value=3.2e-18 Score=144.89 Aligned_cols=154 Identities=18% Similarity=0.172 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYN 226 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~ 226 (316)
.+..++..+. ..|++++|++.++++++.+|+.+.++..+|.++...|++++|+++++++++ ..|.+..++.
T Consensus 39 ~~~~~a~~~~-----~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~ 109 (252)
T 2ho1_A 39 AYIQLGLGYL-----QRGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALA----SDSRNARVLN 109 (252)
T ss_dssp HHHHHHHHHH-----HTTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHH
T ss_pred HHHHHHHHHH-----HcCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCcHHHHH
Confidence 3444444444 899999999999999999999999999999999999999999999999999 5888999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH--hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCC
Q 021175 227 ALGVSYVREGKLDKGISQFETAVK--LQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVP 304 (316)
Q Consensus 227 ~lg~~~~~~g~~~~A~~~~~~al~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~ 304 (316)
.+|.++...|++++|++.++++++ .+|.+..++..+|.++...|++++|+.+++++++.+|++..++..++.++...|
T Consensus 110 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g 189 (252)
T 2ho1_A 110 NYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKER 189 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcC
Confidence 999999999999999999999999 889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 021175 305 LYKGV 309 (316)
Q Consensus 305 ~~~~A 309 (316)
++++|
T Consensus 190 ~~~~A 194 (252)
T 2ho1_A 190 EYVPA 194 (252)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 98755
No 39
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.4e-18 Score=130.58 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=112.6
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 021175 181 DASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWN 260 (316)
Q Consensus 181 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 260 (316)
|..+..+..+|..+...|++++|++.|+++++ .+|+++.++.++|.++...|++++|++.++++++++|+++.+++
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYI 76 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHH
Confidence 34567899999999999999999999999999 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcC------CCChhHHHHHHHHHhhC
Q 021175 261 NLGDAYEKKKDLKSALKAFEEVLLFD------PNNKVARPRRDALKDRV 303 (316)
Q Consensus 261 ~lg~~~~~~g~~~~A~~~~~~al~~~------p~~~~a~~~l~~l~~~~ 303 (316)
++|.++..+|++++|+..|+++++++ |++..++..+..+..++
T Consensus 77 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 77 RKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999 99999999998887764
No 40
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.78 E-value=5.4e-18 Score=129.22 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYN 226 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~ 226 (316)
++...|..+. ..|++++|++.|+++++.+|+++.++.++|.++...|++++|++.++++++ ++|+++.+++
T Consensus 15 ~~~~~G~~~~-----~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~~~a~~ 85 (126)
T 4gco_A 15 EEKNKGNEYF-----KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIR----LDSKFIKGYI 85 (126)
T ss_dssp HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHH
T ss_pred HHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHH----hhhhhhHHHH
Confidence 3344455554 999999999999999999999999999999999999999999999999999 6999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 021175 227 ALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAY 266 (316)
Q Consensus 227 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 266 (316)
++|.++..+|++++|++.|+++++++|++.+++.+++.++
T Consensus 86 ~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 86 RKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999998764
No 41
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.78 E-value=1.7e-17 Score=145.22 Aligned_cols=145 Identities=19% Similarity=0.228 Sum_probs=139.6
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..++++++.+|+++.++..+|.++...|++++|+++++++++ ..|+++.++..+|.++...|++++
T Consensus 149 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~ 224 (327)
T 3cv0_A 149 AAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVE----LRPDDAQLWNKLGATLANGNRPQE 224 (327)
T ss_dssp TSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHcCCHHH
Confidence 3788999999999999999999999999999999999999999999999999 589999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------------ChhHHHHHHHHHhhCCCCCC
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN------------NKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------------~~~a~~~l~~l~~~~~~~~~ 308 (316)
|++.++++++.+|++..++..+|.++...|++++|...++++++.+|+ +..++..++.++...|++++
T Consensus 225 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 304 (327)
T 3cv0_A 225 ALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDL 304 (327)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHH
Confidence 999999999999999999999999999999999999999999999999 78999999999999999875
Q ss_pred C
Q 021175 309 V 309 (316)
Q Consensus 309 A 309 (316)
|
T Consensus 305 A 305 (327)
T 3cv0_A 305 V 305 (327)
T ss_dssp H
T ss_pred H
Confidence 5
No 42
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.78 E-value=5.8e-18 Score=144.88 Aligned_cols=177 Identities=15% Similarity=0.186 Sum_probs=150.7
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC----HHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS----ATEYFELG 191 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~----~~~~~~lg 191 (316)
..++.+.|...++.+....+.... ++..++..+. ..|++++|++.++++++ .|++ ..++..+|
T Consensus 15 ~~~~~~~A~~~~~~~l~~~p~~~~-------~~~~l~~~~~-----~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 15 KNNNYAEAIEVFNKLEAKKYNSPY-------IYNRRAVCYY-----ELAKYDLAQKDIETYFS-KVNATKAKSADFEYYG 81 (272)
T ss_dssp TTTCHHHHHHHHHHHHHTTCCCST-------THHHHHHHHH-----HTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHH-------HHHHHHHHHH-----HHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHH
Confidence 556777788888866666655442 2333344444 89999999999999999 4433 55699999
Q ss_pred HHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 021175 192 AVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 271 (316)
.++...|++++|+++++++++ .+|.++.++.++|.++...|++++|++.++++++.+|+++.+++++|......++
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~ 157 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVD----RDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKE 157 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH----HSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHcccHHHHHHHHHHHHh----cCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 5899999999999999999999999999999999999999999999955555669
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC---CCCC
Q 021175 272 LKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL---YKGV 309 (316)
Q Consensus 272 ~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~---~~~A 309 (316)
+++|+..|+++++.+|++..++..++.++...++ +++|
T Consensus 158 ~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~~A 198 (272)
T 3u4t_A 158 YVKADSSFVKVLELKPNIYIGYLWRARANAAQDPDTKQGLA 198 (272)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHSTTCSSCTT
T ss_pred HHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCcchhhHHH
Confidence 9999999999999999999999999999999887 5544
No 43
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.78 E-value=3.8e-18 Score=134.08 Aligned_cols=138 Identities=12% Similarity=0.058 Sum_probs=117.5
Q ss_pred cchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc
Q 021175 118 SENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRR 197 (316)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 197 (316)
++.+.+.+.++.+....+... ..++.+|..+. ..|++++|++.|+++++.+|+++.++.++|.++...
T Consensus 11 ~~~e~ai~~~~~a~~~~p~~~-------~~~~~la~~y~-----~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 78 (150)
T 4ga2_A 11 ADVERYIASVQGSTPSPRQKS-------IKGFYFAKLYY-----EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELE 78 (150)
T ss_dssp HHHHHHHHHHHHHSCSHHHHH-------TTHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHhcccCcccH-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 455565556664444444433 23344455555 899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHH-HHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 021175 198 KFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQ-FETAVKLQPGYVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 198 g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~-~~~al~~~p~~~~~~~~lg~~~~~~g~ 271 (316)
|++++|+.+|+++++ ++|+++.+++++|.++...|++++|.+. ++++++++|+++.++..++.++..+|+
T Consensus 79 ~~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 79 ENTDKAVECYRRSVE----LNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp TCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred CchHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 999999999999999 6999999999999999999999887776 599999999999999999999988886
No 44
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.77 E-value=2.9e-17 Score=131.52 Aligned_cols=162 Identities=20% Similarity=0.178 Sum_probs=140.3
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++...+...++.+....+... ..+..++..+. ..|++++|+..++++++.+|+++.++..+|.++.
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~ 87 (186)
T 3as5_A 20 KAGRYSQAVMLLEQVYDADAFDV-------DVALHLGIAYV-----KTGAVDRGTELLERSLADAPDNVKVATVLGLTYV 87 (186)
T ss_dssp HHTCHHHHHHHHTTTCCTTSCCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCccCh-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 44566666667765544444332 23333344444 8999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSA 275 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 275 (316)
..|++++|.++++++++ ..|.+..++..+|.++...|++++|++.++++++.+|++..++..+|.++...|++++|
T Consensus 88 ~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 163 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAE----ANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEA 163 (186)
T ss_dssp HHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhcCHHHHHHHHHHHHh----cCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999 58889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCChhHH
Q 021175 276 LKAFEEVLLFDPNNKVAR 293 (316)
Q Consensus 276 ~~~~~~al~~~p~~~~a~ 293 (316)
..+++++++.+|++....
T Consensus 164 ~~~~~~~~~~~~~~~~~~ 181 (186)
T 3as5_A 164 LPHFKKANELDEGASVEL 181 (186)
T ss_dssp HHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHcCCCchhhH
Confidence 999999999999876543
No 45
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.77 E-value=1.1e-16 Score=141.51 Aligned_cols=191 Identities=12% Similarity=0.019 Sum_probs=108.9
Q ss_pred hhccchHHHHHHHHHHhhhhh---hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFEL---GIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELG 191 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 191 (316)
...++.+.|...++.+....+ .....................+..+...|++++|++.++++++.+|+++.++..+|
T Consensus 82 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~ 161 (359)
T 3ieg_A 82 LKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRA 161 (359)
T ss_dssp HHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 345667777777776665555 33322222211111111111122333566666666666666666666666666666
Q ss_pred HHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH-------------
Q 021175 192 AVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTA------------- 258 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~------------- 258 (316)
.++...|++++|++.++++++ ..|.++.++..+|.++...|++++|++.++++++.+|++..+
T Consensus 162 ~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 237 (359)
T 3ieg_A 162 ECFIKEGEPRKAISDLKAASK----LKSDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKL 237 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHT----TCSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHH
Confidence 666666666666666666666 455555666666666665565555555555555555554332
Q ss_pred -------------------------------------HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 021175 259 -------------------------------------WNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKD 301 (316)
Q Consensus 259 -------------------------------------~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~ 301 (316)
+..+|.++...|++++|+..++++++.+|+++.++..++.++.
T Consensus 238 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (359)
T 3ieg_A 238 IESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYL 317 (359)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 3445666666666666666666666666666666666666666
Q ss_pred hCCCCCCC
Q 021175 302 RVPLYKGV 309 (316)
Q Consensus 302 ~~~~~~~A 309 (316)
..|++++|
T Consensus 318 ~~g~~~~A 325 (359)
T 3ieg_A 318 IEEMYDEA 325 (359)
T ss_dssp HTTCHHHH
T ss_pred HcCCHHHH
Confidence 66665543
No 46
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.77 E-value=1e-17 Score=157.05 Aligned_cols=181 Identities=15% Similarity=0.093 Sum_probs=159.0
Q ss_pred chHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC
Q 021175 119 ENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRK 198 (316)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 198 (316)
+...+...++.+....+...........++...|..+. ..|++++|+..++++++.+|+ ..++..+|.++...|
T Consensus 217 ~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~ 290 (537)
T 3fp2_A 217 LLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHF-----LKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKE 290 (537)
T ss_dssp HHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHH-----hcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhc
Confidence 45556667765555555554444444445566666555 899999999999999999999 999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 021175 199 FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKA 278 (316)
Q Consensus 199 ~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 278 (316)
++++|+++++++++ ..|+++.++..+|.++...|++++|++.++++++.+|++..++..+|.++...|++++|+..
T Consensus 291 ~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 366 (537)
T 3fp2_A 291 NSQEFFKFFQKAVD----LNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAF 366 (537)
T ss_dssp CCHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHHHhc----cCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999999 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 279 FEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 279 ~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++++++.+|+++.++..++.++...|++++|
T Consensus 367 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 397 (537)
T 3fp2_A 367 FNETKLKFPTLPEVPTFFAEILTDRGDFDTA 397 (537)
T ss_dssp HHHHHHHCTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999999999998765
No 47
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.77 E-value=1.3e-17 Score=142.59 Aligned_cols=184 Identities=12% Similarity=0.108 Sum_probs=149.3
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCC---CHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDA---SATEYFELGA 192 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~lg~ 192 (316)
..++...|...|+.+....|..... ..+++.+|..+. ..|++++|+..|+++++.+|+ .+.+++.+|.
T Consensus 27 ~~g~~~~A~~~~~~~l~~~p~~~~~----~~a~~~lg~~~~-----~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~ 97 (261)
T 3qky_A 27 NQGKYDRAIEYFKAVFTYGRTHEWA----ADAQFYLARAYY-----QNKEYLLAASEYERFIQIYQIDPRVPQAEYERAM 97 (261)
T ss_dssp HTTCHHHHHHHHHHHGGGCSCSTTH----HHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCCCcch----HHHHHHHHHHHH-----HhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHH
Confidence 4567778888888666665554211 134445555555 899999999999999999884 4679999999
Q ss_pred HHHH--------cCChHHHHHHHHHHHHhcCCCCccHHHHH--------------HHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 193 VMLR--------RKFYPAATKYLLQAIEKWDGDDQDLAQVY--------------NALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 193 ~~~~--------~g~~~~A~~~~~~al~~~~~~~p~~~~~~--------------~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
++.. .|++++|+..|+++++..|. ++....+. +.+|.+|...|++++|+..|+++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~-~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 176 (261)
T 3qky_A 98 CYYKLSPPYELDQTDTRKAIEAFQLFIDRYPN-HELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFD 176 (261)
T ss_dssp HHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhcccccccchhHHHHHHHHHHHHHHCcC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 9999 99999999999999995331 22233333 8899999999999999999999999
Q ss_pred hCCC---cHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHhcCCCCh---hHHHHHHHHHhhCCCCCCC
Q 021175 251 LQPG---YVTAWNNLGDAYEKK----------KDLKSALKAFEEVLLFDPNNK---VARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 251 ~~p~---~~~~~~~lg~~~~~~----------g~~~~A~~~~~~al~~~p~~~---~a~~~l~~l~~~~~~~~~A 309 (316)
.+|+ .+.+++.+|.+|..+ |++++|+..|+++++..|+++ .+...++.+...+++++++
T Consensus 177 ~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~~~~~~~~~~~~ 251 (261)
T 3qky_A 177 AYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTELEGD 251 (261)
T ss_dssp HCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHhhhh
Confidence 9998 578999999999977 999999999999999999995 5566778888888877554
No 48
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.77 E-value=2.8e-17 Score=150.78 Aligned_cols=178 Identities=8% Similarity=0.062 Sum_probs=154.1
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++...|...|+.+....+... .++..++..+. ..|++++|+..++++++.+|+++.++..+|.++.
T Consensus 38 ~~g~~~~A~~~~~~~l~~~p~~~-------~~~~~l~~~~~-----~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 105 (450)
T 2y4t_A 38 AAGQLADALSQFHAAVDGDPDNY-------IAYYRRATVFL-----AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLL 105 (450)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCccH-------HHHHHHHHHHH-----HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 45677777778886655555443 23344444444 8999999999999999999999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCccHH---HHHHHH------------HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQDLA---QVYNAL------------GVSYVREGKLDKGISQFETAVKLQPGYVTAWN 260 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p~~~---~~~~~l------------g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 260 (316)
..|++++|++.|+++++ .+|++. .++..+ |.++...|++++|++.|+++++.+|++..++.
T Consensus 106 ~~g~~~~A~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 181 (450)
T 2y4t_A 106 KQGKLDEAEDDFKKVLK----SNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRE 181 (450)
T ss_dssp HTTCHHHHHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHh----cCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHH
Confidence 99999999999999999 688877 666555 67799999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 261 NLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 261 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
.+|.+|...|++++|+..|+++++.+|++..++..++.++...|++++|
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 230 (450)
T 2y4t_A 182 LRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELS 230 (450)
T ss_dssp HHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999999999999999999999999988755
No 49
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.77 E-value=4.5e-18 Score=136.78 Aligned_cols=136 Identities=15% Similarity=0.223 Sum_probs=123.8
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHH-HHHcCCH--
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVS-YVREGKL-- 238 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~-~~~~g~~-- 238 (316)
..|++++|+..++++++.+|+++.++..+|.++...|++++|+.+|+++++ .+|+++.++.++|.+ +...|++
T Consensus 22 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 22 SQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQ----LRGENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp -----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HHCSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhcCCcch
Confidence 678999999999999999999999999999999999999999999999999 588899999999999 8899999
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 021175 239 DKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKD 301 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~ 301 (316)
++|++.++++++.+|++..+++++|.+|...|++++|+..|+++++++|++......+..+..
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~~ 160 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESINM 160 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999877666655543
No 50
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.77 E-value=1.5e-18 Score=139.77 Aligned_cols=145 Identities=10% Similarity=0.058 Sum_probs=129.4
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHH-HcCCH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYV-REGKL 238 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~-~~g~~ 238 (316)
+...|++++|+..++++++.+|+++.+++++|.++...|++++|+..++++++ ..| ++..+..++.+.. ..++.
T Consensus 16 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~----~~p-~~~~~~~~~~~~~~~~~~~ 90 (176)
T 2r5s_A 16 LLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPL----EYQ-DNSYKSLIAKLELHQQAAE 90 (176)
T ss_dssp HHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCG----GGC-CHHHHHHHHHHHHHHHHTS
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhh----ccC-ChHHHHHHHHHHHHhhccc
Confidence 34899999999999999999999999999999999999999999999999998 577 6666666665533 33455
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC--hhHHHHHHHHHhhCCCCCCC
Q 021175 239 DKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN--KVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~a~~~l~~l~~~~~~~~~A 309 (316)
.+|++.++++++.+|+++.+++++|.++...|++++|+..|+++++.+|+. +.++..++.++...|+.++|
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A 163 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAI 163 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcH
Confidence 568999999999999999999999999999999999999999999999986 55999999999999998765
No 51
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.77 E-value=4.3e-18 Score=148.29 Aligned_cols=146 Identities=12% Similarity=0.029 Sum_probs=138.7
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
+...|++++|+..|+++++.+|+++.+++++|.++...|++++|+..++++++ .+|+........+..+...++.+
T Consensus 127 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~----~~p~~~~~~~~~~~~l~~~~~~~ 202 (287)
T 3qou_A 127 LMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPL----QDQDTRYQGLVAQIELLXQAADT 202 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCG----GGCSHHHHHHHHHHHHHHHHTSC
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCch----hhcchHHHHHHHHHHHHhhcccC
Confidence 34899999999999999999999999999999999999999999999999999 58888888888888899999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC--hhHHHHHHHHHhhCCCCCCC
Q 021175 240 KGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN--KVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~a~~~l~~l~~~~~~~~~A 309 (316)
+|++.++++++.+|+++.+++++|.++...|++++|+..|+++++.+|++ ..++.+++.++..+|+.+++
T Consensus 203 ~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a 274 (287)
T 3qou_A 203 PEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDAL 274 (287)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHH
T ss_pred ccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcH
Confidence 99999999999999999999999999999999999999999999999998 88999999999999987654
No 52
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.77 E-value=1.5e-17 Score=139.47 Aligned_cols=149 Identities=12% Similarity=0.089 Sum_probs=131.7
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH--
Q 021175 160 VLVRRELDLSAKELQEQVRSGDAS---ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR-- 234 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~-- 234 (316)
++..|++++|+..|+++++..|+. ..+++.+|.++...|++++|++.|+++++..|. ++..+.+++.+|.++..
T Consensus 14 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~ 92 (225)
T 2yhc_A 14 KLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALD 92 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhh
Confidence 448999999999999999998876 479999999999999999999999999996442 34445689999999986
Q ss_pred ----------------cCCHHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHH
Q 021175 235 ----------------EGKLDKGISQFETAVKLQPGYVTAW-----------------NNLGDAYEKKKDLKSALKAFEE 281 (316)
Q Consensus 235 ----------------~g~~~~A~~~~~~al~~~p~~~~~~-----------------~~lg~~~~~~g~~~~A~~~~~~ 281 (316)
.|++++|++.|+++++.+|++..+. +.+|.+|...|++++|+..|++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 172 (225)
T 2yhc_A 93 DSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEG 172 (225)
T ss_dssp C--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 5799999999999999999986443 6789999999999999999999
Q ss_pred HHhcCCCCh---hHHHHHHHHHhhCCCCCCC
Q 021175 282 VLLFDPNNK---VARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 282 al~~~p~~~---~a~~~l~~l~~~~~~~~~A 309 (316)
+++..|+++ +++..++.++.++|++++|
T Consensus 173 ~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A 203 (225)
T 2yhc_A 173 MLRDYPDTQATRDALPLMENAYRQMQMNAQA 203 (225)
T ss_dssp HHHHSTTSHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHCcCCCccHHHHHHHHHHHHHcCCcHHH
Confidence 999999986 6799999999999998765
No 53
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.77 E-value=3.4e-18 Score=162.69 Aligned_cols=132 Identities=12% Similarity=0.032 Sum_probs=81.5
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|++.++++++.+|+++.++.++|.++...|++++|+++++++++ .+|++..+++++|.++...|++++|
T Consensus 35 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~g~~~~A 110 (568)
T 2vsy_A 35 GMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASD----AAPEHPGIALWLGHALEDAGQAEAA 110 (568)
T ss_dssp HHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 556666666666666666666666666666666666666666666666666 3555566666666666666666666
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHc---CCHHHHHHHHHHHHhcCCCChhHHHHHH
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEKK---KDLKSALKAFEEVLLFDPNNKVARPRRD 297 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~~---g~~~~A~~~~~~al~~~p~~~~a~~~l~ 297 (316)
++.|+++++.+|++..++.++|.++..+ |++++|.+.++++++.+|++...+..++
T Consensus 111 ~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 169 (568)
T 2vsy_A 111 AAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEPFAFLS 169 (568)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCHHHHTT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccChHHHhC
Confidence 6666666666666666666666666666 6666666666666666666555554443
No 54
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.76 E-value=6.8e-17 Score=148.19 Aligned_cols=190 Identities=9% Similarity=-0.019 Sum_probs=115.4
Q ss_pred hhccchHHHHHHHHHHhhhhhhhh---HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQ---LSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELG 191 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg 191 (316)
...++.+.|...++.+....+... .............+....+..+...|++++|+..++++++.+|+++.++..+|
T Consensus 105 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 184 (450)
T 2y4t_A 105 LKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRA 184 (450)
T ss_dssp HHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 445677777778876655555443 22222211211112222233344677777777777777777777777777777
Q ss_pred HHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH---------
Q 021175 192 AVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNL--------- 262 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l--------- 262 (316)
.++...|++++|++.|+++++ .+|.++.++..+|.++...|++++|++.|+++++.+|++...+..+
T Consensus 185 ~~~~~~g~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 260 (450)
T 2y4t_A 185 ECFIKEGEPRKAISDLKAASK----LKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKL 260 (450)
T ss_dssp HHHHHTTCGGGGHHHHHHHHH----HHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 777777777777777777777 3566666666666666666666666666666666666665555444
Q ss_pred ---HHHHHHcCCHHHHHHHHHHHHhcCCCChh----HHHHHHHHHhhCCCCCC
Q 021175 263 ---GDAYEKKKDLKSALKAFEEVLLFDPNNKV----ARPRRDALKDRVPLYKG 308 (316)
Q Consensus 263 ---g~~~~~~g~~~~A~~~~~~al~~~p~~~~----a~~~l~~l~~~~~~~~~ 308 (316)
|.++...|++++|+..|+++++++|+++. .+..++.++...|++++
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~ 313 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVE 313 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHH
Confidence 55666666666666666666666665532 45555555555555543
No 55
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.76 E-value=4.9e-17 Score=154.63 Aligned_cols=178 Identities=19% Similarity=0.218 Sum_probs=105.7
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++.+.|...|+.+....+.... ++..++..+. ..|++++|++.|+++++.+|++..++..+|.++.
T Consensus 385 ~~g~~~~A~~~~~~~~~~~~~~~~-------~~~~l~~~~~-----~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 452 (597)
T 2xpi_A 385 CVNKISEARRYFSKSSTMDPQFGP-------AWIGFAHSFA-----IEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHM 452 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHH-------HHHHHHHHHH-----HHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 445556666666544443333221 2222233332 5666666666666666666666666666666666
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCc-HHHHHHHHHHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL------QPGY-VTAWNNLGDAYEK 268 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~-~~~~~~lg~~~~~ 268 (316)
..|++++|+++|+++++ ..|.++.++..+|.++...|++++|++.|+++++. +|++ ..++..+|.++..
T Consensus 453 ~~g~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~ 528 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYA----LFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRK 528 (597)
T ss_dssp HHTCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHH
Confidence 66666666666666666 35556666666666666666666666666666665 4443 5566666666666
Q ss_pred cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 269 KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 269 ~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
.|++++|++.++++++.+|+++.++..++.++...|++++|
T Consensus 529 ~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A 569 (597)
T 2xpi_A 529 LKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLA 569 (597)
T ss_dssp TTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHH
Confidence 66666666666666666666666666666666666665443
No 56
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.76 E-value=1.2e-17 Score=142.80 Aligned_cols=146 Identities=12% Similarity=0.113 Sum_probs=131.9
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
+...|++++|+..++++++.+|+++.++..+|.++...|++++|+++++++++. +........++.++|.++...|+++
T Consensus 13 ~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-~~~~~~~~~~~~~lg~~~~~~~~~~ 91 (272)
T 3u4t_A 13 LFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSK-VNATKAKSADFEYYGKILMKKGQDS 91 (272)
T ss_dssp HHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTT-SCTTTCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-cCchhHHHHHHHHHHHHHHHcccHH
Confidence 348999999999999999999999999999999999999999999999999992 2112233677999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHH-HHHhhCCCCC
Q 021175 240 KGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRD-ALKDRVPLYK 307 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~-~l~~~~~~~~ 307 (316)
+|++.|+++++.+|+++.++.++|.+|...|++++|+.+|+++++.+|+++.++..++ .++.. ++++
T Consensus 92 ~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-~~~~ 159 (272)
T 3u4t_A 92 LAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN-KEYV 159 (272)
T ss_dssp HHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT-TCHH
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH-HHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 55544 3444
No 57
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.76 E-value=1.7e-16 Score=138.86 Aligned_cols=144 Identities=19% Similarity=0.206 Sum_probs=110.7
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHH--------------HH-HHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFEL--------------GA-VMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYN 226 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l--------------g~-~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~ 226 (316)
..|++++|++.++++++.+|+....+..+ +. ++...|++++|+++++++++ ..|.+..++.
T Consensus 101 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~ 176 (327)
T 3cv0_A 101 NEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALE----MNPNDAQLHA 176 (327)
T ss_dssp HTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSHHHHHHHHHHHHHHHH----HSTTCHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHh----hCCCCHHHHH
Confidence 44455555555555555555444444433 33 34444555555555555555 4677788999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 227 ALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 227 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
.+|.++...|++++|++.++++++.+|+++.++..+|.++...|++++|+..++++++.+|++..++..++.++...|++
T Consensus 177 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~ 256 (327)
T 3cv0_A 177 SLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQY 256 (327)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 021175 307 KGV 309 (316)
Q Consensus 307 ~~A 309 (316)
++|
T Consensus 257 ~~A 259 (327)
T 3cv0_A 257 DLA 259 (327)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.76 E-value=1.5e-18 Score=168.65 Aligned_cols=144 Identities=14% Similarity=-0.020 Sum_probs=139.0
Q ss_pred HHhhhHHHHHHHHHHHH--------HcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHH
Q 021175 161 LVRRELDLSAKELQEQV--------RSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSY 232 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al--------~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~ 232 (316)
...|++++|++.+++++ +.+|++..+++.+|.++...|++++|++.|+++++ .+|++..+++++|.++
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~~~a~~~lg~~~ 477 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAE----RVGWRWRLVWYRAVAE 477 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhc----cCcchHHHHHHHHHHH
Confidence 47899999999999999 99999999999999999999999999999999999 6999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 233 VREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 233 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
..+|++++|++.|+++++++|+++.+++++|.++..+|++++ ++.|+++++++|++..++.+++.++...|++++|
T Consensus 478 ~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A 553 (681)
T 2pzi_A 478 LLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGA 553 (681)
T ss_dssp HHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999998765
No 59
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.76 E-value=5.7e-18 Score=134.68 Aligned_cols=123 Identities=21% Similarity=0.251 Sum_probs=110.6
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 021175 180 GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAW 259 (316)
Q Consensus 180 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 259 (316)
++..+..++.+|.++...|++++|+++|+++++ .+|+++.+++++|.+|...|++++|++.|+++++++|++..++
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 82 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALS----IAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAW 82 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHH
Confidence 345678999999999999999999999999999 6999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHH--HHHHHhhCCCC
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPR--RDALKDRVPLY 306 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~--l~~l~~~~~~~ 306 (316)
+++|.+|..+|++++|+.+|+++++++|++..++.. +..+..++++.
T Consensus 83 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 131 (164)
T 3sz7_A 83 SRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEA 131 (164)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999985544 44445444443
No 60
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.75 E-value=1.6e-16 Score=135.73 Aligned_cols=163 Identities=15% Similarity=0.030 Sum_probs=125.2
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 021175 117 ASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLR 196 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 196 (316)
.++.+.|...++.+....+... .....++..+|..+. ..|++++|+..++++++.+|+++.++..+|.++..
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~-----~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~ 89 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTD---DERAQLLYERGVLYD-----SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQ 89 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCH---HHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhcccccC---chhHHHHHHHHHHHH-----HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 3455666666664443311111 011134444455554 88999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH--------------------
Q 021175 197 RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYV-------------------- 256 (316)
Q Consensus 197 ~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-------------------- 256 (316)
.|++++|+++++++++ .+|.+..++.++|.++...|++++|++.++++++.+|++.
T Consensus 90 ~~~~~~A~~~~~~al~----~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 165 (275)
T 1xnf_A 90 AGNFDAAYEAFDSVLE----LDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQKLDEKQAKE 165 (275)
T ss_dssp TTCHHHHHHHHHHHHH----HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCHHHHHH
T ss_pred ccCHHHHHHHHHHHHh----cCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHHHHhcCHHHHHH
Confidence 9999999999999999 5888889999999999999999999999999999888764
Q ss_pred --------------------------------------------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 021175 257 --------------------------------------------------TAWNNLGDAYEKKKDLKSALKAFEEVLLFD 286 (316)
Q Consensus 257 --------------------------------------------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 286 (316)
.++..+|.+|...|++++|...|+++++.+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 245 (275)
T 1xnf_A 166 VLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVANN 245 (275)
T ss_dssp HHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC
Confidence 456677777888888888888888888887
Q ss_pred CCChh
Q 021175 287 PNNKV 291 (316)
Q Consensus 287 p~~~~ 291 (316)
|++..
T Consensus 246 p~~~~ 250 (275)
T 1xnf_A 246 VHNFV 250 (275)
T ss_dssp CTTCH
T ss_pred chhHH
Confidence 76654
No 61
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.75 E-value=7.2e-17 Score=122.10 Aligned_cols=125 Identities=28% Similarity=0.522 Sum_probs=120.2
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..++++++.+|++..++..+|.++...|++++|.++++++++ ..|.+..++..+|.++...|++++
T Consensus 12 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~ 87 (136)
T 2fo7_A 12 YKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPRSAEAWYNLGNAYYKQGDYDE 87 (136)
T ss_dssp HHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHTTTCHHH
T ss_pred HHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHH----HCCCchHHHHHHHHHHHHhcCHHH
Confidence 3889999999999999999999999999999999999999999999999999 588889999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN 289 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 289 (316)
|++.++++++.+|++..++..+|.++...|++++|...++++++.+|++
T Consensus 88 A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 88 AIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999999999999863
No 62
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.75 E-value=1.2e-17 Score=132.56 Aligned_cols=129 Identities=17% Similarity=0.143 Sum_probs=115.6
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--------------DDQDLAQVYNALGVSYVREGKLDKGISQFETA 248 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 248 (316)
.+..+...|..++..|+|++|+..|+++++..+. .+|....+++++|.+|..+|++++|+..++++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 3567899999999999999999999999994211 06778899999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh-hHHHHHHHHHhhCCCCCCCCC
Q 021175 249 VKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNK-VARPRRDALKDRVPLYKGVPV 311 (316)
Q Consensus 249 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-~a~~~l~~l~~~~~~~~~A~~ 311 (316)
++++|+++.+++++|.+|..+|++++|+..|+++++++|+++ .+...+..+...+++.++.+.
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k 153 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSR 153 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999 778888888888777665544
No 63
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.75 E-value=1.2e-16 Score=151.89 Aligned_cols=175 Identities=19% Similarity=0.160 Sum_probs=151.1
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVM 194 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 194 (316)
...++.+.|...|+.+....+... ..+..++..+. ..|++++|++.|+++++.+|+++.++..+|.++
T Consensus 418 ~~~g~~~~A~~~~~~~~~~~~~~~-------~~~~~l~~~~~-----~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 418 AIEGEHDQAISAYTTAARLFQGTH-------LPYLFLGMQHM-----QLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHTTTTCS-------HHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCccch-------HHHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 445677777778876555554433 23333444444 899999999999999999999999999999999
Q ss_pred HHcCChHHHHHHHHHHHHhcCC--CCccH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 021175 195 LRRKFYPAATKYLLQAIEKWDG--DDQDL-AQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~--~~p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 271 (316)
...|++++|++.|+++++..+. .+|+. ..++..+|.++...|++++|++.++++++.+|+++.++..+|.+|...|+
T Consensus 486 ~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 9999999999999999995331 26665 88999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 021175 272 LKSALKAFEEVLLFDPNNKVARPRRDALKD 301 (316)
Q Consensus 272 ~~~A~~~~~~al~~~p~~~~a~~~l~~l~~ 301 (316)
+++|.+.|+++++++|+++.++..++.++.
T Consensus 566 ~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~ 595 (597)
T 2xpi_A 566 PGLAITHLHESLAISPNEIMASDLLKRALE 595 (597)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHh
Confidence 999999999999999999999999998764
No 64
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.75 E-value=3.3e-17 Score=155.91 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=119.8
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHH
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGI 242 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~ 242 (316)
.|++++|++.++++++.+|+++.++.++|.++...|++++|+++|+++++ .+|++..++.++|.++..+|++++|+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~ 77 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLA----LHPGHPEAVARLGRVRWTQQRHAEAA 77 (568)
T ss_dssp -------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT----TSTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHCCCHHHHH
Confidence 47899999999999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhC---CCCCCC
Q 021175 243 SQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRV---PLYKGV 309 (316)
Q Consensus 243 ~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~---~~~~~A 309 (316)
+.|+++++++|++..+++++|.+|..+|++++|++.|+++++++|++..++.+++.++... |++++|
T Consensus 78 ~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A 147 (568)
T 2vsy_A 78 VLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVL 147 (568)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 665443
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.75 E-value=9.1e-18 Score=128.07 Aligned_cols=112 Identities=24% Similarity=0.256 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-------
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY------- 255 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------- 255 (316)
.+.++.++|..++..|+|++|+++|+++++ ++|+++.++.++|.+|..+|++++|++.++++++++|++
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~----~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIE----LDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 456788999999999999999999999999 699999999999999999999999999999999998865
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDAL 299 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l 299 (316)
..++.++|.++..+|++++|+++|+++++.+|+ ++....+..+
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~l 125 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHHh
Confidence 468999999999999999999999999999885 5555555544
No 66
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.75 E-value=3.2e-19 Score=158.97 Aligned_cols=130 Identities=13% Similarity=0.137 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHcCChHHHHHHHHHH
Q 021175 146 LGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS---------------ATEYFELGAVMLRRKFYPAATKYLLQA 210 (316)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (316)
.++...|..+. ..|++++|+..|+++++.+|++ ..++.++|.++...|++++|+++++++
T Consensus 148 ~~~~~~g~~~~-----~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 222 (336)
T 1p5q_A 148 TIVKERGTVYF-----KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 222 (336)
T ss_dssp HHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45555555555 7888888888888888888877 578888888888888888888888888
Q ss_pred HHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH-HHHHHHHHh
Q 021175 211 IEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSA-LKAFEEVLL 284 (316)
Q Consensus 211 l~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A-~~~~~~al~ 284 (316)
++ .+|+++.+++++|.+|..+|++++|++.|+++++++|++..++.++|.++..+|++++| ...|++.+.
T Consensus 223 l~----~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 223 LE----LDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH----hCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 57888888888888888888888888888888888888888888888888888888887 456666664
No 67
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.74 E-value=2.1e-16 Score=130.47 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=118.8
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
+...|++++|+..+++++ +| ++.+++++|.++...|++++|+++|+++++ .+|+++.+++++|.++...|+++
T Consensus 16 ~~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~~~~~~~~~~lg~~~~~~~~~~ 88 (213)
T 1hh8_A 16 AADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSIN----RDKHLAVAYFQRGMLYYQTEKYD 88 (213)
T ss_dssp HHHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCccchHHHHHHHHHHHHcccHH
Confidence 348999999999999985 33 789999999999999999999999999999 58999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHH
Q 021175 240 KGISQFETAVKLQPGYV----------------TAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRR 296 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~----------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 296 (316)
+|++.|+++++..|++. .+++++|.++..+|++++|+.+|+++++++|++.......
T Consensus 89 ~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 161 (213)
T 1hh8_A 89 LAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDK 161 (213)
T ss_dssp HHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHH
T ss_pred HHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHH
Confidence 99999999999888765 9999999999999999999999999999999875544333
No 68
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.74 E-value=4.6e-17 Score=123.55 Aligned_cols=122 Identities=19% Similarity=0.251 Sum_probs=115.9
Q ss_pred CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 021175 180 GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAW 259 (316)
Q Consensus 180 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 259 (316)
.|....+++.+|..+...|++++|+++++++++ ..|.+..++.++|.++...|++++|++.++++++.+|++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 87 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIK----RNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGY 87 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHT----TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHH
Confidence 456788999999999999999999999999999 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
+++|.++...|++++|+.+++++++.+|++..++..++.++...|+
T Consensus 88 ~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 88 TRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999887664
No 69
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.74 E-value=3e-16 Score=136.89 Aligned_cols=137 Identities=14% Similarity=0.035 Sum_probs=94.6
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHH--HHHHHcCCHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALG--VSYVREGKLD 239 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg--~~~~~~g~~~ 239 (316)
..|++++|++.+++ |+++.++..+|.++...|++++|++.++++++ .+|++.......+ ..+...|+++
T Consensus 113 ~~g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~----~~p~~~~~~l~~a~~~l~~~~~~~~ 183 (291)
T 3mkr_A 113 YDQNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQD----QDEDATLTQLATAWVSLAAGGEKLQ 183 (291)
T ss_dssp HTTCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHCTTHHH
T ss_pred HCCCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh----hCcCcHHHHHHHHHHHHHhCchHHH
Confidence 67777777777766 66777777777777777777777777777777 3555443322222 2222346777
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCC
Q 021175 240 KGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~ 307 (316)
+|++.|+++++.+|+++.+++++|.++..+|++++|...|+++++.+|++++++.+++.++...|++.
T Consensus 184 eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~ 251 (291)
T 3mkr_A 184 DAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPP 251 (291)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCH
Confidence 77777777777777777777777777777777777777777777777777777777777777777653
No 70
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.74 E-value=1.9e-17 Score=141.59 Aligned_cols=164 Identities=16% Similarity=0.113 Sum_probs=132.0
Q ss_pred ccchHHHHHHHHHHhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHc--------CCCCHHHH
Q 021175 117 ASENVQMDAVYEIGELFELGIQ-LSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRS--------GDASATEY 187 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~ 187 (316)
-++.++|...|+.+........ ........++..+|..+. ..|++++|+..++++++. .|....++
T Consensus 14 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 88 (283)
T 3edt_B 14 LVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYR-----DQNKYKEAAHLLNDALAIREKTLGKDHPAVAATL 88 (283)
T ss_dssp CSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH-----HcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 4456666667764433322111 111122245555566665 899999999999999987 36668899
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCc
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL--------QPGY 255 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~ 255 (316)
.++|.++...|++++|+++++++++.... .+|....++.++|.++...|++++|++++++++++ +|..
T Consensus 89 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 168 (283)
T 3edt_B 89 NNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNV 168 (283)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 99999999999999999999999995321 26888999999999999999999999999999998 7777
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..++.++|.++..+|++++|+.++++++++
T Consensus 169 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 169 AKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 899999999999999999999999999986
No 71
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.74 E-value=4.7e-17 Score=122.74 Aligned_cols=125 Identities=18% Similarity=0.272 Sum_probs=117.1
Q ss_pred cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Q 021175 179 SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTA 258 (316)
Q Consensus 179 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 258 (316)
.+|..+..+..+|..+...|++++|++.++++++ ..|+++.++..+|.++...|++++|++.++++++.+|+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 82 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIE----LNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKA 82 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHH----cCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHH
Confidence 3456678899999999999999999999999999 588889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCC
Q 021175 259 WNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 259 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~ 307 (316)
++.+|.++...|++++|+.+++++++.+|++..++..++.++...|+++
T Consensus 83 ~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~ 131 (131)
T 2vyi_A 83 YGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAP 131 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999988764
No 72
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.73 E-value=1.3e-17 Score=130.66 Aligned_cols=119 Identities=14% Similarity=0.073 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--------DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL---- 251 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 251 (316)
+..+.+.|+.+...|+|++|++.|+++++..|. ..|.++.+|.++|.++..+|++++|+..+++++++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 456888999999999999999999999995432 01124559999999999999999999999999999
Q ss_pred ---CCCcHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 252 ---QPGYVTAW----NNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 252 ---~p~~~~~~----~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
+|++..+| +++|.++..+|++++|+.+|+++++++|++......+..+.+.
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~ 148 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEV 148 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999999998877777666544
No 73
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.73 E-value=7.1e-17 Score=140.79 Aligned_cols=171 Identities=13% Similarity=0.011 Sum_probs=131.1
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC------HHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS------ATEYFE 189 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 189 (316)
..++.+.|...|..+..+.+..... .....++..+|..+. ..|++++|+..++++++..|.. +.++.+
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~-~~~a~~~~~lg~~~~-----~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~ 122 (292)
T 1qqe_A 49 LRKELNLAGDSFLKAADYQKKAGNE-DEAGNTYVEAYKCFK-----SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFE 122 (292)
T ss_dssp HTTCTHHHHHHHHHHHHHHHHTTCH-HHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4566777777887555544332211 122245566666665 8999999999999999987643 568999
Q ss_pred HHHHHHHc-CChHHHHHHHHHHHHhcCCCC-c-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-------HH
Q 021175 190 LGAVMLRR-KFYPAATKYLLQAIEKWDGDD-Q-DLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVT-------AW 259 (316)
Q Consensus 190 lg~~~~~~-g~~~~A~~~~~~al~~~~~~~-p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-------~~ 259 (316)
+|.+|... |++++|+.+|+++++..+... + ....++.++|.++..+|++++|+++|++++++.|++.. ++
T Consensus 123 lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 202 (292)
T 1qqe_A 123 LGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYF 202 (292)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHH
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHH
Confidence 99999996 999999999999999643211 1 22678999999999999999999999999999987643 68
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhH
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVA 292 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a 292 (316)
.++|.++..+|++++|+.+|+++++++|++...
T Consensus 203 ~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 235 (292)
T 1qqe_A 203 LKKGLCQLAATDAVAAARTLQEGQSEDPNFADS 235 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHGGGCC-------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCCc
Confidence 999999999999999999999999999987764
No 74
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.73 E-value=6.9e-17 Score=133.79 Aligned_cols=118 Identities=18% Similarity=0.222 Sum_probs=112.2
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHH----------------HHHHHHHcCCHHHHHHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNA----------------LGVSYVREGKLDKGISQFE 246 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~----------------lg~~~~~~g~~~~A~~~~~ 246 (316)
.++.+...|..+...|++++|+.+|+++++ .+|+++.+++. +|.++...|++++|++.|+
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 78 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIA----LNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYK 78 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 467788999999999999999999999999 69999999999 9999999999999999999
Q ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCC
Q 021175 247 TAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVP 304 (316)
Q Consensus 247 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~ 304 (316)
++++++|+++.+++++|.++...|++++|+.+|+++++++|+++.++.+++.++...|
T Consensus 79 ~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 79 ELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999998875443
No 75
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.73 E-value=4e-18 Score=139.84 Aligned_cols=145 Identities=15% Similarity=0.051 Sum_probs=121.0
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHH----------------HHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLA----------------QVY 225 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~----------------~~~ 225 (316)
..++++++.+.++......+..+..+..+|..+...|+|++|++.|+++++ ..|.++ .++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALD----FFIHTEEWDDQILLDKKKNIEISCN 91 (198)
T ss_dssp ------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TTTTCTTCCCHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHhcccccchhhHHHHHHHHHHHHH
Confidence 456666666666665555666778899999999999999999999999999 455544 889
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 226 NALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 226 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
.++|.++...|++++|++.++++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++..++.++..+++
T Consensus 92 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 92 LNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888877
Q ss_pred CCCCC
Q 021175 306 YKGVP 310 (316)
Q Consensus 306 ~~~A~ 310 (316)
.+++.
T Consensus 172 ~~~~~ 176 (198)
T 2fbn_A 172 ARKKD 176 (198)
T ss_dssp HHC--
T ss_pred HHHHH
Confidence 76554
No 76
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.72 E-value=2.2e-16 Score=138.57 Aligned_cols=140 Identities=14% Similarity=-0.032 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHH-cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHH-HHHHHHHHHHHcCCHHHHHH
Q 021175 166 LDLSAKELQEQVR-SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQ-VYNALGVSYVREGKLDKGIS 243 (316)
Q Consensus 166 ~~~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~-~~~~lg~~~~~~g~~~~A~~ 243 (316)
.++|+..|+++++ .+|++..+|.++|.++...|++++|.+.|+++++ .+|.++. +|.++|.++.+.|++++|.+
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~~A~~ 155 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLA----IEDIDPTLVYIQYMKFARRAEGIKSGRM 155 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT----SSSSCTHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHh----ccccCccHHHHHHHHHHHHhcCHHHHHH
Confidence 4888899999998 6888888899999988888999999999999988 6777765 88888888888888888888
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 244 QFETAVKLQPGYVTAWNNLGDAYEK-KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 244 ~~~~al~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
.|+++++.+|.+..++...+..... .|++++|...|+++++.+|+++.++..++.++...|++++|
T Consensus 156 ~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A 222 (308)
T 2ond_A 156 IFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNT 222 (308)
T ss_dssp HHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHH
Confidence 8888888888887777766665443 68888888888888888888888888888888888776544
No 77
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.72 E-value=4.5e-17 Score=139.24 Aligned_cols=133 Identities=21% Similarity=0.229 Sum_probs=123.9
Q ss_pred HhhhHHHHHHHHHHHHHcC----CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCC
Q 021175 162 VRRELDLSAKELQEQVRSG----DASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGK 237 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~----p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~ 237 (316)
..+++++|+..++++++.. |..+.++..+|.++...|++++|+++|+++++ .+|.++.++.++|.++...|+
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~la~~~~~~~~ 92 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALA----IRPDMPEVFNYLGIYLTQAGN 92 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHH----cCCCcHHHHHHHHHHHHHccC
Confidence 5689999999999999974 46788999999999999999999999999999 589999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 021175 238 LDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDA 298 (316)
Q Consensus 238 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~ 298 (316)
+++|++.|+++++.+|++..++.++|.+|...|++++|+.+++++++++|++.......+.
T Consensus 93 ~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 153 (275)
T 1xnf_A 93 FDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYL 153 (275)
T ss_dssp HHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999866554443
No 78
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.72 E-value=1.6e-16 Score=121.73 Aligned_cols=123 Identities=17% Similarity=0.195 Sum_probs=112.8
Q ss_pred HcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q 021175 178 RSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVT 257 (316)
Q Consensus 178 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 257 (316)
..+|..+..+..+|..+...|++++|+.+|+++++ .+|+++.+++++|.++...|++++|++.++++++++|+++.
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 78 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVK 78 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHh----hCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHH
Confidence 35678899999999999999999999999999999 58999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-----ChhHHHHHHHHHhhCC
Q 021175 258 AWNNLGDAYEKKKDLKSALKAFEEVLLFDPN-----NKVARPRRDALKDRVP 304 (316)
Q Consensus 258 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-----~~~a~~~l~~l~~~~~ 304 (316)
+++++|.++...|++++|+.+|+++++++|+ +......+..+..+..
T Consensus 79 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 79 AHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 7777777777766543
No 79
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.3e-16 Score=148.54 Aligned_cols=183 Identities=13% Similarity=0.107 Sum_probs=157.3
Q ss_pred ccchHHHHHHHHHHhh-----h--hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHH
Q 021175 117 ASENVQMDAVYEIGEL-----F--ELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFE 189 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 189 (316)
.++.+.|...++.+.. . .+...........++..++..+. ..|++++|+..++++++.+|+ ..++..
T Consensus 202 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~A~~~~~~~l~~~~~-~~~~~~ 275 (514)
T 2gw1_A 202 PESYDKADESFTKAARLFEEQLDKNNEDEKLKEKLAISLEHTGIFKF-----LKNDPLGAHEDIKKAIELFPR-VNSYIY 275 (514)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHHHHHHHH-----HSSCHHHHHHHHHHHHHHCCC-HHHHHH
T ss_pred hccHHHHHHHHHHHHHHhhhhhccCccccccChHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHhhCcc-HHHHHH
Confidence 5677777777775544 2 11111111122234455555555 899999999999999999999 999999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 021175 190 LGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKK 269 (316)
Q Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 269 (316)
+|.++...|++++|++.++++++ ..|.+..++..+|.++...|++++|++.++++++.+|++..++..+|.++...
T Consensus 276 l~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 351 (514)
T 2gw1_A 276 MALIMADRNDSTEYYNYFDKALK----LDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRE 351 (514)
T ss_dssp HHHHHHTSSCCTTGGGHHHHHHT----TCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTT
T ss_pred HHHHHHHCCCHHHHHHHHHHHhh----cCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHc
Confidence 99999999999999999999999 68999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 270 KDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 270 g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|++++|+..++++++.+|+++.++..++.++...|++++|
T Consensus 352 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 391 (514)
T 2gw1_A 352 NKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKA 391 (514)
T ss_dssp TCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHH
Confidence 9999999999999999999999999999999999998655
No 80
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.71 E-value=4.1e-16 Score=115.38 Aligned_cols=115 Identities=20% Similarity=0.247 Sum_probs=109.2
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNL 262 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 262 (316)
.+..++.+|..+...|++++|+++++++++ ..|.++.++.++|.++...|++++|++.++++++.+|+++.+++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 78 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRK 78 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHH----HCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 467789999999999999999999999999 5888999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 021175 263 GDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKD 301 (316)
Q Consensus 263 g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~ 301 (316)
|.++...|++++|...++++++.+|+++.++..++.+..
T Consensus 79 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 79 AAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999999999999999999988764
No 81
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.71 E-value=1.2e-16 Score=139.22 Aligned_cols=148 Identities=14% Similarity=0.086 Sum_probs=128.5
Q ss_pred HhhhHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC-C-ccHHHHHHHHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDA------SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD-D-QDLAQVYNALGVSYV 233 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~-p~~~~~~~~lg~~~~ 233 (316)
..|++++|++.|+++++..+. .+.++.++|.++...|++++|+.+|++++++.+.. + +..+.++.++|.+|.
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~ 128 (292)
T 1qqe_A 49 LRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE 128 (292)
T ss_dssp HTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 789999999999999987532 36799999999999999999999999999964321 1 123678999999999
Q ss_pred Hc-CCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChh-------HHHHHHHH
Q 021175 234 RE-GKLDKGISQFETAVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKV-------ARPRRDAL 299 (316)
Q Consensus 234 ~~-g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-------a~~~l~~l 299 (316)
.. |++++|+++|++++++.|++ ..++.++|.++..+|++++|+.+|++++++.|++.. .+.+++.+
T Consensus 129 ~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~ 208 (292)
T 1qqe_A 129 NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLC 208 (292)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHH
T ss_pred HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence 96 99999999999999998754 578999999999999999999999999999998765 56888999
Q ss_pred HhhCCCCCCC
Q 021175 300 KDRVPLYKGV 309 (316)
Q Consensus 300 ~~~~~~~~~A 309 (316)
+...|++++|
T Consensus 209 ~~~~g~~~~A 218 (292)
T 1qqe_A 209 QLAATDAVAA 218 (292)
T ss_dssp HHHTTCHHHH
T ss_pred HHHcCCHHHH
Confidence 9999988654
No 82
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=5.3e-16 Score=119.97 Aligned_cols=121 Identities=20% Similarity=0.201 Sum_probs=114.5
Q ss_pred cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 021175 179 SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL---AQVYNALGVSYVREGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 179 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 255 (316)
.+|.....++.+|..+...|++++|+++|+++++ ..|++ ..++.++|.++...|++++|++.++++++.+|++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALG----LDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHT----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----HcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC
Confidence 4577899999999999999999999999999999 68877 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhC
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRV 303 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~ 303 (316)
..+++++|.++...|++++|+.+|+++++++|++..++..++.+....
T Consensus 99 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 146 (148)
T 2dba_A 99 VKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNISGPS 146 (148)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999998887654
No 83
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.71 E-value=2.2e-16 Score=148.02 Aligned_cols=177 Identities=11% Similarity=0.178 Sum_probs=129.4
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 021175 117 ASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLR 196 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 196 (316)
.++...|...++.+....+... .++..++..+. ..|++++|++.++++++.+|+++.++..+|.++..
T Consensus 289 ~~~~~~A~~~~~~~~~~~~~~~-------~~~~~l~~~~~-----~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~ 356 (537)
T 3fp2_A 289 KENSQEFFKFFQKAVDLNPEYP-------PTYYHRGQMYF-----ILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYK 356 (537)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCH-------HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHhccCCCCH-------HHHHHHHHHHH-----hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 3445555555554444433332 12333333333 77888888888888888888888888888888888
Q ss_pred cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHc-
Q 021175 197 RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYV------TAWNNLGDAYEKK- 269 (316)
Q Consensus 197 ~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~- 269 (316)
.|++++|+++++++++ ..|+++.++.++|.++...|++++|++.|+++++.+|++. ..++.+|.++...
T Consensus 357 ~g~~~~A~~~~~~~~~----~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 432 (537)
T 3fp2_A 357 QGKFTESEAFFNETKL----KFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQS 432 (537)
T ss_dssp TTCHHHHHHHHHHHHH----HCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHh
Confidence 8888888888888888 4777777888888888888888888888888887776543 2355667777777
Q ss_pred ---------CCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 270 ---------KDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 270 ---------g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|++++|+..|+++++.+|++..++..++.++...|++++|
T Consensus 433 ~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g~~~~A 481 (537)
T 3fp2_A 433 SQDPTQLDEEKFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEA 481 (537)
T ss_dssp TC----CCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred hccchhhhHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHH
Confidence 8888888888888888888888888888888888887654
No 84
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.70 E-value=7.1e-17 Score=150.24 Aligned_cols=144 Identities=13% Similarity=0.190 Sum_probs=106.1
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|+..++++++.+|+++.++..+|.++...|++++|++.++++++ ..|.++.++.++|.++...|++++|
T Consensus 316 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~A 391 (514)
T 2gw1_A 316 ILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKR----KFPEAPEVPNFFAEILTDKNDFDKA 391 (514)
T ss_dssp HTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHH----HSTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HcccCHHHHHHHHHHHHHCCCHHHH
Confidence 667777777777777777777777777777777777777777777777777 4666667777777777777777777
Q ss_pred HHHHHHHHHhCCCcHH------HHHHHHHHHHH---cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 242 ISQFETAVKLQPGYVT------AWNNLGDAYEK---KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~------~~~~lg~~~~~---~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++.++++++.+|++.. +++.+|.++.. .|++++|+..++++++.+|++..++..++.++...|++++|
T Consensus 392 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 468 (514)
T 2gw1_A 392 LKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEA 468 (514)
T ss_dssp HHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHH
Confidence 7777777777776644 77777777777 77777777777777777777777777777777777776544
No 85
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.70 E-value=2.9e-18 Score=159.10 Aligned_cols=140 Identities=17% Similarity=0.186 Sum_probs=97.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH---------------HHHHHHH
Q 021175 164 RELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL---------------AQVYNAL 228 (316)
Q Consensus 164 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~---------------~~~~~~l 228 (316)
+++++|+..++++++..|+.+..+.++|..+...|+|++|+.+|+++++. .|.+ ..+++++
T Consensus 248 ~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~----~p~~~~~~~~~~~~~~~~~~~~~~nl 323 (457)
T 1kt0_A 248 KSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSW----LEMEYGLSEKESKASESFLLAAFLNL 323 (457)
T ss_dssp EEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----HTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred hhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH----hcccccCChHHHHHHHHHHHHHHHHH
Confidence 34555666666666666677777777777777777777777777777774 4433 5677777
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCC
Q 021175 229 GVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 229 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~ 307 (316)
|.+|.++|++++|++.|+++++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++..++.++..+++++
T Consensus 324 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 402 (457)
T 1kt0_A 324 AMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHN 402 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 7777777777777777777777777777777777777777777777777777777777777777777777766665543
No 86
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.70 E-value=6.8e-16 Score=115.27 Aligned_cols=121 Identities=30% Similarity=0.557 Sum_probs=111.3
Q ss_pred CCCC-HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Q 021175 180 GDAS-ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTA 258 (316)
Q Consensus 180 ~p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 258 (316)
+|.. ..+++.+|.++...|++++|++.++++++ ..|.+..++..+|.++...|++++|+..++++++.+|++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 79 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEA 79 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHH
Confidence 4544 78899999999999999999999999999 588889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCC
Q 021175 259 WNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVP 304 (316)
Q Consensus 259 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~ 304 (316)
+..+|.++...|++++|...++++++.+|+++.++..++.++...|
T Consensus 80 ~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 80 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999998887654
No 87
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.70 E-value=1.4e-16 Score=120.41 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 021175 185 TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGD 264 (316)
Q Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 264 (316)
..++.+|..+...|++++|+..++++++ .+|+++.+++.+|.++...|++++|++.|+++++++|+++.+++++|.
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~ 93 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQ----KEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 93 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 3578999999999999999999999999 699999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChh
Q 021175 265 AYEKKKDLKSALKAFEEVLLFDPNNKV 291 (316)
Q Consensus 265 ~~~~~g~~~~A~~~~~~al~~~p~~~~ 291 (316)
++...|++++|+..|+++++++|++..
T Consensus 94 ~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 94 SHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999999999998754
No 88
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.70 E-value=1.1e-15 Score=134.19 Aligned_cols=173 Identities=14% Similarity=0.053 Sum_probs=146.0
Q ss_pred HHHHHHHHHHhh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHH-HHHHHHHHHHHcC
Q 021175 121 VQMDAVYEIGEL-FELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAT-EYFELGAVMLRRK 198 (316)
Q Consensus 121 ~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~lg~~~~~~g 198 (316)
+.|...|+.+.. +.+.... .+...+.++. ..|++++|.+.|+++++.+|+++. +|.++|.++...|
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~-------~~~~~~~~~~-----~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~ 148 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNML-------LYFAYADYEE-----SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAE 148 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHH-------HHHHHHHHHH-----HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHH-------HHHHHHHHHH-----hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhc
Confidence 677778886666 5665542 3334444444 789999999999999999999887 9999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Q 021175 199 FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR-EGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALK 277 (316)
Q Consensus 199 ~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 277 (316)
++++|.+.|+++++ ..|....++...+..... .|++++|.+.|+++++.+|+++.++.++|..+...|++++|+.
T Consensus 149 ~~~~A~~~~~~a~~----~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~ 224 (308)
T 2ond_A 149 GIKSGRMIFKKARE----DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRV 224 (308)
T ss_dssp CHHHHHHHHHHHHT----STTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999 678777888777666544 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHhc---CCC-ChhHHHHHHHHHhhCCCCCCC
Q 021175 278 AFEEVLLF---DPN-NKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 278 ~~~~al~~---~p~-~~~a~~~l~~l~~~~~~~~~A 309 (316)
.|+++++. +|+ ....+..++.++...|+.++|
T Consensus 225 ~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a 260 (308)
T 2ond_A 225 LFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASI 260 (308)
T ss_dssp HHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999995 553 677888888888888876543
No 89
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.70 E-value=2.1e-15 Score=131.56 Aligned_cols=132 Identities=11% Similarity=0.086 Sum_probs=117.5
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHH--HHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELG--AVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKL 238 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg--~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~ 238 (316)
...|++++|++.++++++.+|+........+ ..+...|++++|+..|+++++ ..|+++.+++++|.++..+|++
T Consensus 141 ~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~----~~p~~~~~~~~la~~~~~~g~~ 216 (291)
T 3mkr_A 141 LKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMAD----KCSPTLLLLNGQAACHMAQGRW 216 (291)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH----HSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHcCCH
Confidence 3899999999999999999999865544433 334456899999999999999 5899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhcCCCChhHHHHH
Q 021175 239 DKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKS-ALKAFEEVLLFDPNNKVARPRR 296 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~-A~~~~~~al~~~p~~~~a~~~l 296 (316)
++|++.|+++++++|+++.+++++|.++...|+.++ +.++++++++++|+++.+....
T Consensus 217 ~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~~ 275 (291)
T 3mkr_A 217 EAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYR 275 (291)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 999999999999999999999999999999999976 5689999999999999876543
No 90
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.70 E-value=1.6e-17 Score=130.66 Aligned_cols=101 Identities=11% Similarity=0.078 Sum_probs=95.6
Q ss_pred HHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 021175 205 KYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLL 284 (316)
Q Consensus 205 ~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 284 (316)
..++++++ ++|+++.+++++|.++...|++++|++.|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++
T Consensus 23 ~~l~~al~----l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 23 ATLKDINA----IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFA 98 (151)
T ss_dssp CCTGGGCC----SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHhC----CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 33456666 79999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 285 FDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 285 ~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++|+++.++.+++.++..+|++++|
T Consensus 99 l~P~~~~~~~~lg~~~~~lg~~~eA 123 (151)
T 3gyz_A 99 LGKNDYTPVFHTGQCQLRLKAPLKA 123 (151)
T ss_dssp HSSSCCHHHHHHHHHHHHTTCHHHH
T ss_pred hCCCCcHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999998765
No 91
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.69 E-value=3.9e-16 Score=135.55 Aligned_cols=189 Identities=17% Similarity=0.150 Sum_probs=149.3
Q ss_pred hccchHHHHHHHHHHhhhhhhhh-HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHc--------CCCCHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQ-LSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRS--------GDASATE 186 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~ 186 (316)
..++.+.|...++.+........ ........++..++..+. ..|++++|+..++++++. .|....+
T Consensus 39 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 113 (311)
T 3nf1_A 39 SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYR-----DQNKYKDAANLLNDALAIREKTLGKDHPAVAAT 113 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHH
Confidence 45566677777764444322111 001111234445555555 899999999999999987 3566889
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhcC----CCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Q 021175 187 YFELGAVMLRRKFYPAATKYLLQAIEKWD----GDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL--------QPG 254 (316)
Q Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~----~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~ 254 (316)
+.++|.++...|++++|+++++++++... ...|....++.++|.++...|++++|+++++++++. +|.
T Consensus 114 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 193 (311)
T 3nf1_A 114 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN 193 (311)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH
Confidence 99999999999999999999999998641 135888999999999999999999999999999998 677
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-------------------------------------------------
Q 021175 255 YVTAWNNLGDAYEKKKDLKSALKAFEEVLLF------------------------------------------------- 285 (316)
Q Consensus 255 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------------------------------------------------- 285 (316)
...++..+|.+|...|++++|..+++++++.
T Consensus 194 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 273 (311)
T 3nf1_A 194 VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVD 273 (311)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCC
Confidence 7889999999999999999999999999974
Q ss_pred CCCChhHHHHHHHHHhhCCCCCCC
Q 021175 286 DPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 286 ~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+|....++..++.++...|++++|
T Consensus 274 ~~~~~~~~~~la~~~~~~g~~~~A 297 (311)
T 3nf1_A 274 SPTVTTTLKNLGALYRRQGKFEAA 297 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred CchHHHHHHHHHHHHHHCCCHHHH
Confidence 455667788888888888887655
No 92
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.69 E-value=1.2e-15 Score=120.22 Aligned_cols=121 Identities=21% Similarity=0.210 Sum_probs=112.9
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..++++++.+|+++.++.++|.++...|++++|+++++++++ .+|.++.+++++|.++...|++++
T Consensus 24 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~~a~~~~~~~~~~~ 99 (166)
T 1a17_A 24 FKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE----LDKKYIKGYYRRAASNMALGKFRA 99 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCcccHHHHHHHHHHHHHhccHHH
Confidence 3899999999999999999999999999999999999999999999999999 589999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHH--HHHcCCHHHHHHHHHHHHhc
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDA--YEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~~A~~~~~~al~~ 285 (316)
|++.++++++.+|++..++..++.+ +...|++++|+..++++..+
T Consensus 100 A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 100 ALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 9999999999999999888555554 88899999999999987654
No 93
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.69 E-value=2.6e-15 Score=125.64 Aligned_cols=164 Identities=12% Similarity=0.008 Sum_probs=133.0
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHH---HHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASAT---EYFELGA 192 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~---~~~~lg~ 192 (316)
..++.+.|...|+.+....|...... .+++.+|..+. ..|++++|+..|+++++.+|+++. +++.+|.
T Consensus 16 ~~g~~~~A~~~~~~~~~~~p~~~~~~----~a~~~lg~~~~-----~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~ 86 (225)
T 2yhc_A 16 QDGNWRQAITQLEALDNRYPFGPYSQ----QVQLDLIYAYY-----KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGL 86 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTTHH----HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHH----HHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHH
Confidence 45667777778886665555433211 23444444444 899999999999999999998764 8999999
Q ss_pred HHHH------------------cCChHHHHHHHHHHHHhcCCCCccHHHHH-----------------HHHHHHHHHcCC
Q 021175 193 VMLR------------------RKFYPAATKYLLQAIEKWDGDDQDLAQVY-----------------NALGVSYVREGK 237 (316)
Q Consensus 193 ~~~~------------------~g~~~~A~~~~~~al~~~~~~~p~~~~~~-----------------~~lg~~~~~~g~ 237 (316)
++.. .|++++|+..|+++++ ..|++..+. ..+|.+|...|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~----~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~ 162 (225)
T 2yhc_A 87 TNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVR----GYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGA 162 (225)
T ss_dssp HHHHHHC--------------CCHHHHHHHHHHHHHHT----TCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHH----HCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 9876 5799999999999999 456544332 678999999999
Q ss_pred HHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhH
Q 021175 238 LDKGISQFETAVKLQPGYV---TAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVA 292 (316)
Q Consensus 238 ~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a 292 (316)
+++|+..|+++++.+|+++ .+++.+|.+|.++|++++|++.++++....|++.+-
T Consensus 163 ~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~~~ 220 (225)
T 2yhc_A 163 WVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTLEH 220 (225)
T ss_dssp HHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCCCC
T ss_pred HHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCchhh
Confidence 9999999999999999985 789999999999999999999999999999987653
No 94
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.67 E-value=1.6e-15 Score=134.94 Aligned_cols=143 Identities=16% Similarity=0.148 Sum_probs=131.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH---------------HHHHHH
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL---------------AQVYNA 227 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~---------------~~~~~~ 227 (316)
.+++++|++.++++++.+|+.+.++.++|.++...|++++|+.+|+++++. .|.+ ..++++
T Consensus 126 L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~----~p~~~~~~~~~~~~~~~~~~~~~~n 201 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSW----LEYESSFSNEEAQKAQALRLASHLN 201 (336)
T ss_dssp EEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----TTTCCCCCSHHHHHHHHHHHHHHHH
T ss_pred EeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH----hhccccCChHHHHHHHHHHHHHHHH
Confidence 445666777777777888889999999999999999999999999999994 6665 799999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCC
Q 021175 228 LGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~ 307 (316)
+|.++..+|++++|++.|+++++++|+++.+++++|.+|..+|++++|+.+|+++++++|++..++..++.++..+|+++
T Consensus 202 la~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 202 LAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred CC
Q 021175 308 GV 309 (316)
Q Consensus 308 ~A 309 (316)
++
T Consensus 282 ~a 283 (336)
T 1p5q_A 282 AR 283 (336)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 95
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.67 E-value=1.2e-15 Score=115.61 Aligned_cols=118 Identities=18% Similarity=0.155 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHH
Q 021175 185 TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLA---QVYNALGVSYVREGKLDKGISQFETAVKLQPGY---VTA 258 (316)
Q Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~---~~~ 258 (316)
.+++.+|..+...|++++|++.|+++++. .|+++ .+++.+|.++...|++++|++.|+++++.+|++ +.+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 78 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLEL----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGG 78 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHH----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHH----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHH
Confidence 35788999999999999999999999995 55554 899999999999999999999999999999999 899
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 259 WNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 259 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
++.+|.++..+|++++|+..|+++++..|+++.+......+....++.
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~~ 126 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRLGQ 126 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999998888877777665543
No 96
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.67 E-value=3.2e-14 Score=122.08 Aligned_cols=167 Identities=15% Similarity=0.174 Sum_probs=141.7
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 021175 117 ASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLV----RRELDLSAKELQEQVRSGDASATEYFELGA 192 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 192 (316)
.++.+.|...|+.+.... .. .++..+|..+. . .+++++|++.++++++.+ ++.+++++|.
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~-------~a~~~lg~~~~-----~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~ 118 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YS-------NGCHLLGNLYY-----SGQGVSQNTNKALQYYSKACDLK--YAEGCASLGG 118 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CH-------HHHHHHHHHHH-----HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCC--CH-------HHHHHHHHHHh-----CCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHH
Confidence 567777777887544432 21 24444555554 6 899999999999999874 8999999999
Q ss_pred HHHH----cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 021175 193 VMLR----RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR----EGKLDKGISQFETAVKLQPGYVTAWNNLGD 264 (316)
Q Consensus 193 ~~~~----~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 264 (316)
++.. .+++++|+++|+++++ .. ++.+++++|.+|.. .+++++|+++|+++++. +++.+++++|.
T Consensus 119 ~~~~~~~~~~~~~~A~~~~~~a~~----~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~ 190 (273)
T 1ouv_A 119 IYHDGKVVTRDFKKAVEYFTKACD----LN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGN 190 (273)
T ss_dssp HHHHCSSSCCCHHHHHHHHHHHHH----TT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHH
T ss_pred HHHcCCCcccCHHHHHHHHHHHHh----cC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHH
Confidence 9999 9999999999999999 34 56789999999999 99999999999999987 46899999999
Q ss_pred HHHH----cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh----CCCCCCC
Q 021175 265 AYEK----KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR----VPLYKGV 309 (316)
Q Consensus 265 ~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~----~~~~~~A 309 (316)
+|.. .+++++|+.+|+++++.+| +.++..++.++.. .+++++|
T Consensus 191 ~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l~~~~~~g~~~~~~~~~A 241 (273)
T 1ouv_A 191 MYHHGEGATKNFKEALARYSKACELEN--GGGCFNLGAMQYNGEGVTRNEKQA 241 (273)
T ss_dssp HHHHTCSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHTTSSSSCCSTTH
T ss_pred HHHcCCCCCccHHHHHHHHHHHHhCCC--HHHHHHHHHHHHcCCCcccCHHHH
Confidence 9999 9999999999999999866 8899999999998 8887765
No 97
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.66 E-value=2.8e-15 Score=113.38 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=100.4
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
+...|++++|+..|+++++.+|+++.++.++|.++...|++++|++.++++++ .+|+++.+++++|.++...|+++
T Consensus 14 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~~~~~ 89 (126)
T 3upv_A 14 YFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE----KDPNFVRAYIRKATAQIAVKEYA 89 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHHhCHH
Confidence 34899999999999999999999999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHHHHHHHHHhC------CCcHHHHHHHHHHHHHc
Q 021175 240 KGISQFETAVKLQ------PGYVTAWNNLGDAYEKK 269 (316)
Q Consensus 240 ~A~~~~~~al~~~------p~~~~~~~~lg~~~~~~ 269 (316)
+|++.|+++++++ |++..++..++.+..+.
T Consensus 90 ~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 90 SALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999999 99999999988876553
No 98
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.66 E-value=2e-14 Score=123.31 Aligned_cols=168 Identities=18% Similarity=0.223 Sum_probs=142.5
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH----hhhHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLV----RRELDLSAKELQEQVRSGDASATEYFELG 191 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~A~~~~~~al~~~p~~~~~~~~lg 191 (316)
..++.++|...|+.+.. +... .++..+|..+. . .+++++|+..|+++++.+ ++.+++++|
T Consensus 18 ~~~~~~~A~~~~~~a~~--~~~~-------~a~~~lg~~~~-----~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 81 (273)
T 1ouv_A 18 KEKDFTQAKKYFEKACD--LKEN-------SGCFNLGVLYY-----QGQGVEKNLKKAASFYAKACDLN--YSNGCHLLG 81 (273)
T ss_dssp HTTCHHHHHHHHHHHHH--TTCH-------HHHHHHHHHHH-----HTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHH--CCCH-------HHHHHHHHHHH-----cCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHH
Confidence 34577777778874443 3332 23444555554 6 899999999999999986 799999999
Q ss_pred HHHHH----cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 021175 192 AVMLR----RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR----EGKLDKGISQFETAVKLQPGYVTAWNNLG 263 (316)
Q Consensus 192 ~~~~~----~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg 263 (316)
.++.. .+++++|+++|+++++ . +++.+++++|.+|.. .+++++|+++|+++++.+ ++.+++++|
T Consensus 82 ~~~~~g~~~~~~~~~A~~~~~~a~~----~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg 153 (273)
T 1ouv_A 82 NLYYSGQGVSQNTNKALQYYSKACD----L--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILG 153 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHH----T--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHH
T ss_pred HHHhCCCCcccCHHHHHHHHHHHHH----c--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHH
Confidence 99999 9999999999999999 3 378899999999999 999999999999999976 688999999
Q ss_pred HHHHH----cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh----CCCCCCC
Q 021175 264 DAYEK----KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR----VPLYKGV 309 (316)
Q Consensus 264 ~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~----~~~~~~A 309 (316)
.+|.. .+++++|+.+|+++++. +++.++..++.++.. .+++++|
T Consensus 154 ~~~~~~~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~g~~~~~~~~~A 205 (273)
T 1ouv_A 154 SLYDAGRGTPKDLKKALASYDKACDL--KDSPGCFNAGNMYHHGEGATKNFKEA 205 (273)
T ss_dssp HHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTCSSCCCHHHH
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 99999 99999999999999987 467999999999998 7776544
No 99
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.66 E-value=8.4e-16 Score=121.20 Aligned_cols=121 Identities=20% Similarity=0.282 Sum_probs=110.2
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNL 262 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 262 (316)
.+..+..+|..+...|++++|+..|+++++ ..|.+..++.++|.++...|++++|++.++++++.+|+++.+++++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 87 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 87 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 356789999999999999999999999999 5899999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHH--HhhCCCCC
Q 021175 263 GDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDAL--KDRVPLYK 307 (316)
Q Consensus 263 g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l--~~~~~~~~ 307 (316)
|.++...|++++|+.+|+++++++|++..++..++.. +...|+++
T Consensus 88 a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~ 134 (166)
T 1a17_A 88 AASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFE 134 (166)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888555444 44445544
No 100
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.66 E-value=2.3e-15 Score=135.82 Aligned_cols=185 Identities=10% Similarity=0.009 Sum_probs=142.6
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCC-------CHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDA-------SATEY 187 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~~~ 187 (316)
...++.+.|...++.+........... ....++..+|..+. ..|++++|+..++++++..+. .+.++
T Consensus 114 ~~~g~~~~A~~~~~~al~~~~~~~~~~-~~a~~~~~lg~~~~-----~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 187 (383)
T 3ulq_A 114 LDQREYLSAIKFFKKAESKLIFVKDRI-EKAEFFFKMSESYY-----YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCH 187 (383)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCHH-HHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHhhCCCHH-HHHHHHHHHHHHHH-----HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 355777888888875554422221111 12245556666665 899999999999999987443 35689
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hC-CCcHHHH
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGKLDKGISQFETAVK-----LQ-PGYVTAW 259 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----~~-p~~~~~~ 259 (316)
.++|.++...|++++|+++++++++..+. ..+..+.++.++|.+|..+|++++|+++++++++ .+ |..+.++
T Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 267 (383)
T 3ulq_A 188 SLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAY 267 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 99999999999999999999999986543 2344567999999999999999999999999999 56 8889999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCChhHHHHHHHHHhhCCC
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFD-----PNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~a~~~l~~l~~~~~~ 305 (316)
.++|.+|..+|++++|..++++++++. |........++.++...|+
T Consensus 268 ~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~~~ 318 (383)
T 3ulq_A 268 FLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPD 318 (383)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTSSCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCc
Confidence 999999999999999999999999984 3333334456666665554
No 101
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.66 E-value=4.8e-16 Score=140.31 Aligned_cols=151 Identities=15% Similarity=0.136 Sum_probs=133.0
Q ss_pred HHHHhhhHHHHHHHHHHHHHc---CC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC---CccHHHHHHHHH
Q 021175 159 QVLVRRELDLSAKELQEQVRS---GD---ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD---DQDLAQVYNALG 229 (316)
Q Consensus 159 ~~~~~~~~~~A~~~~~~al~~---~p---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~p~~~~~~~~lg 229 (316)
.+...|++++|+..++++++. .+ ..+.++.++|.++...|++++|+++++++++..+.. .+..+.++.++|
T Consensus 112 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg 191 (383)
T 3ulq_A 112 YELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFA 191 (383)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 344899999999999999986 22 356899999999999999999999999999976542 355678999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----cC-CCChhHHHHHH
Q 021175 230 VSYVREGKLDKGISQFETAVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLL-----FD-PNNKVARPRRD 297 (316)
Q Consensus 230 ~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----~~-p~~~~a~~~l~ 297 (316)
.+|..+|++++|++++++++++.|.. ..++.++|.+|..+|++++|+.+++++++ .+ |....++.+++
T Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 271 (383)
T 3ulq_A 192 TNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLIT 271 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Confidence 99999999999999999999886533 46899999999999999999999999999 46 77888999999
Q ss_pred HHHhhCCCCCCC
Q 021175 298 ALKDRVPLYKGV 309 (316)
Q Consensus 298 ~l~~~~~~~~~A 309 (316)
.++...|++++|
T Consensus 272 ~~~~~~g~~~~A 283 (383)
T 3ulq_A 272 QIHYKLGKIDKA 283 (383)
T ss_dssp HHHHHTTCHHHH
T ss_pred HHHHHCCCHHHH
Confidence 999999998765
No 102
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.65 E-value=7.2e-16 Score=115.44 Aligned_cols=109 Identities=15% Similarity=0.156 Sum_probs=94.2
Q ss_pred HcCChHHHHHHHHHHHHhcCCC---CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGD---DQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDL 272 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 272 (316)
..|++++|+.+|+++++ . +|+++.++.++|.++..+|++++|++.|+++++.+|+++.+++++|.++..+|++
T Consensus 2 ~~g~~~~A~~~~~~al~----~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 77 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA----SGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRY 77 (117)
T ss_dssp -----CCCHHHHHHHHS----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCH
T ss_pred CCCcHHHHHHHHHHHHH----cCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCH
Confidence 46889999999999999 5 5899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCC
Q 021175 273 KSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 273 ~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~ 308 (316)
++|+..++++++.+|+++........+....+.+++
T Consensus 78 ~~A~~~~~~al~~~p~~~~~~~~~~ai~~~~~~l~~ 113 (117)
T 3k9i_A 78 EQGVELLLKIIAETSDDETIQSYKQAILFYADKLDE 113 (117)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHTHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888777777666666554
No 103
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.65 E-value=9.6e-16 Score=115.56 Aligned_cols=120 Identities=18% Similarity=0.189 Sum_probs=107.0
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------
Q 021175 182 ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY------ 255 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------ 255 (316)
+.+..++.+|..+...|++++|+.+++++++ ..|.++.+++++|.++...|++++|++.++++++.+|++
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 77 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKE----LDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQ 77 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHH
Confidence 3467789999999999999999999999999 588889999999999999999999999999999998877
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 256 -VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 256 -~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
..+++++|.++...|++++|..+|+++++.+| ++.....++.+...+++.
T Consensus 78 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 78 IAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999999999998 588888888887766544
No 104
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.65 E-value=8.1e-16 Score=112.80 Aligned_cols=108 Identities=14% Similarity=0.168 Sum_probs=103.3
Q ss_pred cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--cH
Q 021175 179 SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG--YV 256 (316)
Q Consensus 179 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~~ 256 (316)
.+|+++.++..+|.++...|++++|+.+++++++ ..|.+..++.++|.++...|++++|++.++++++.+|+ +.
T Consensus 1 l~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 76 (112)
T 2kck_A 1 MVDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQ----LDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNK 76 (112)
T ss_dssp CCCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCH
T ss_pred CCCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHH----hCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchH
Confidence 3688889999999999999999999999999999 58889999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCCCh
Q 021175 257 TAWNNLGDAYEKK-KDLKSALKAFEEVLLFDPNNK 290 (316)
Q Consensus 257 ~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~~ 290 (316)
.+++++|.++... |++++|++++++++...|+++
T Consensus 77 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 77 DVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 9999999999999 999999999999999999864
No 105
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.64 E-value=8.4e-16 Score=133.39 Aligned_cols=158 Identities=17% Similarity=0.201 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRS--------GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG-- 216 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-- 216 (316)
++..++..+. ..|++++|+..++++++. .|....++..+|.++...|++++|+++++++++....
T Consensus 29 ~~~~l~~~~~-----~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 103 (311)
T 3nf1_A 29 TLHNLVIQYA-----SQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTL 103 (311)
T ss_dssp HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----HcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh
Confidence 3444444444 899999999999999984 6677899999999999999999999999999986421
Q ss_pred --CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-
Q 021175 217 --DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ--------PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF- 285 (316)
Q Consensus 217 --~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~- 285 (316)
..|....++.++|.++...|++++|++.+++++++. |....++.++|.++...|++++|+.++++++++
T Consensus 104 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~ 183 (311)
T 3nf1_A 104 GKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIY 183 (311)
T ss_dssp CTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 268889999999999999999999999999999884 556788999999999999999999999999998
Q ss_pred -------CCCChhHHHHHHHHHhhCCCCCCC
Q 021175 286 -------DPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 286 -------~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+|....++..++.++...|++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 214 (311)
T 3nf1_A 184 QTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 214 (311)
T ss_dssp HHTSCTTCHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHHcCCHHHH
Confidence 777788899999999999998765
No 106
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.64 E-value=2.9e-15 Score=113.12 Aligned_cols=121 Identities=27% Similarity=0.487 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 021175 185 TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGD 264 (316)
Q Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 264 (316)
.+++.+|.++...|++++|++.++++++ ..|.+..++..+|.++...|++++|++.++++++.+|++..+++.+|.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~ 77 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 77 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHH----cCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 5688999999999999999999999999 588889999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 265 AYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 265 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++...|++++|+..++++++..|++..++..++.++...|++++|
T Consensus 78 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 78 AYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH
Confidence 999999999999999999999999999999999999999988655
No 107
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.64 E-value=7.2e-15 Score=110.55 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=104.2
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..++++++.+|+++.++..+|.++...|++++|+++++++++ ..|.++.+++.+|.++...|++++
T Consensus 23 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 98 (131)
T 2vyi_A 23 MKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAIC----IDPAYSKAYGRMGLALSSLNKHVE 98 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHh----cCccCHHHHHHHHHHHHHhCCHHH
Confidence 3899999999999999999999999999999999999999999999999999 588999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYEKKKDL 272 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 272 (316)
|++.++++++.+|++..++..+|.++...|++
T Consensus 99 A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 99 AVAYYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999998875
No 108
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.64 E-value=3.6e-15 Score=112.89 Aligned_cols=106 Identities=12% Similarity=0.132 Sum_probs=102.8
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|+..++++++.+|++..++.++|.++...|++++|+++++++++ ..|.++.+++++|.++...|++++|
T Consensus 28 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~la~~~~~~~~~~~A 103 (133)
T 2lni_A 28 QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQ----LEPTFIKGYTRKAAALEAMKDYTKA 103 (133)
T ss_dssp HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCchHHHHHHHHHHHHHhhHHHH
Confidence 899999999999999999999999999999999999999999999999999 5899999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 271 (316)
++.++++++.+|++..++..++.++..+|+
T Consensus 104 ~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 104 MDVYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 999999999999999999999999998775
No 109
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.63 E-value=3.5e-16 Score=133.68 Aligned_cols=148 Identities=18% Similarity=0.171 Sum_probs=131.4
Q ss_pred HhhhHHHHHHHHHHHHHc--------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcC----CCCccHHHHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRS--------GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWD----GDDQDLAQVYNALG 229 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~----~~~p~~~~~~~~lg 229 (316)
..|++++|+..++++++. .|..+.++..+|.++...|++++|+++++++++... ..+|....++.++|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 567778888888888773 356788999999999999999999999999998641 13688899999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCChhHH
Q 021175 230 VSYVREGKLDKGISQFETAVKL--------QPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF--------DPNNKVAR 293 (316)
Q Consensus 230 ~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~a~ 293 (316)
.++...|++++|++.+++++++ +|....++.++|.++...|++++|+.++++++++ +|....++
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999998 4677899999999999999999999999999999 77778899
Q ss_pred HHHHHHHhhCCCCCCC
Q 021175 294 PRRDALKDRVPLYKGV 309 (316)
Q Consensus 294 ~~l~~l~~~~~~~~~A 309 (316)
..++.++...|++++|
T Consensus 173 ~~la~~~~~~g~~~~A 188 (283)
T 3edt_B 173 NNLASCYLKQGKYQDA 188 (283)
T ss_dssp HHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHcCCHHHH
Confidence 9999999999998755
No 110
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.63 E-value=1.5e-15 Score=118.95 Aligned_cols=94 Identities=13% Similarity=0.003 Sum_probs=90.3
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|+..|+++++.+|+++.+++++|.++...|++++|++.|+++++ .+|+++.+++++|.++...|++++|
T Consensus 33 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----l~p~~~~~~~~lg~~~~~~g~~~~A 108 (148)
T 2vgx_A 33 QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV----MDIXEPRFPFHAAECLLQXGELAEA 108 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh----cCCCCchHHHHHHHHHHHcCCHHHH
Confidence 899999999999999999999999999999999999999999999999999 6999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHH
Q 021175 242 ISQFETAVKLQPGYVTAW 259 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~ 259 (316)
++.|+++++++|+++...
T Consensus 109 ~~~~~~al~~~p~~~~~~ 126 (148)
T 2vgx_A 109 ESGLFLAQELIANXPEFX 126 (148)
T ss_dssp HHHHHHHHHHHTTCGGGH
T ss_pred HHHHHHHHHHCcCCCcch
Confidence 999999999999876543
No 111
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.63 E-value=2.3e-15 Score=116.73 Aligned_cols=103 Identities=17% Similarity=0.043 Sum_probs=95.0
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..|++++..+|+++.++.++|.++...|++++|+.+|+++++ .+|+++.+++++|.++...|++++
T Consensus 29 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~ 104 (142)
T 2xcb_A 29 YQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGAL----MDINEPRFPFHAAECHLQLGDLDG 104 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh----cCCCCcHHHHHHHHHHHHcCCHHH
Confidence 3899999999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYE 267 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~ 267 (316)
|++.|+++++++|+++........+..
T Consensus 105 A~~~~~~al~~~p~~~~~~~~~~~~~~ 131 (142)
T 2xcb_A 105 AESGFYSARALAAAQPAHEALAARAGA 131 (142)
T ss_dssp HHHHHHHHHHHHHTCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcchHHHHHHHHH
Confidence 999999999999988766555444433
No 112
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.63 E-value=5.3e-15 Score=117.34 Aligned_cols=103 Identities=11% Similarity=0.048 Sum_probs=97.5
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..|+++++.+|+++.+++++|.++...|++++|+.+|+++++ .+|++..+++++|.++..+|++++
T Consensus 22 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~ 97 (164)
T 3sz7_A 22 MARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATV----VDPKYSKAWSRLGLARFDMADYKG 97 (164)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHccCHHH
Confidence 3899999999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHH
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYE 267 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~ 267 (316)
|++.|+++++++|++..+++..+....
T Consensus 98 A~~~~~~al~~~p~~~~~~~~~~l~~~ 124 (164)
T 3sz7_A 98 AKEAYEKGIEAEGNGGSDAMKRGLETT 124 (164)
T ss_dssp HHHHHHHHHHHHSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 999999999999999988777776543
No 113
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.63 E-value=3e-15 Score=120.36 Aligned_cols=152 Identities=13% Similarity=0.053 Sum_probs=127.2
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~ 195 (316)
..++.+.|...++.+....|... .++..++..+. ..|++++|+..++++++.+| ++..+..++.+..
T Consensus 18 ~~g~~~~A~~~~~~al~~~P~~~-------~a~~~la~~~~-----~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~ 84 (176)
T 2r5s_A 18 QQGEHAQALNVIQTLSDELQSRG-------DVKLAKADCLL-----ETKQFELAQELLATIPLEYQ-DNSYKSLIAKLEL 84 (176)
T ss_dssp HTTCHHHHHHHHHTSCHHHHTSH-------HHHHHHHHHHH-----HTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCcH-------HHHHHHHHHHH-----HCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHH
Confidence 45667777778886666666655 34444455555 89999999999999999999 8877776665533
Q ss_pred -HcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCH
Q 021175 196 -RRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY--VTAWNNLGDAYEKKKDL 272 (316)
Q Consensus 196 -~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~lg~~~~~~g~~ 272 (316)
..++..+|++.++++++ .+|+++.+++++|.++...|++++|++.|+++++.+|+. ..++.++|.++..+|+.
T Consensus 85 ~~~~~~~~a~~~~~~al~----~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 160 (176)
T 2r5s_A 85 HQQAAESPELKRLEQELA----ANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQG 160 (176)
T ss_dssp HHHHTSCHHHHHHHHHHH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSS
T ss_pred HhhcccchHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCC
Confidence 33455678999999999 699999999999999999999999999999999999976 66999999999999999
Q ss_pred HHHHHHHHHHHh
Q 021175 273 KSALKAFEEVLL 284 (316)
Q Consensus 273 ~~A~~~~~~al~ 284 (316)
++|...|++++.
T Consensus 161 ~~A~~~y~~al~ 172 (176)
T 2r5s_A 161 NAIASKYRRQLY 172 (176)
T ss_dssp CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999999999875
No 114
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.62 E-value=1.2e-14 Score=130.89 Aligned_cols=168 Identities=17% Similarity=0.053 Sum_probs=135.5
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCC-------CHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDA-------SATEY 187 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-------~~~~~ 187 (316)
...++...|...++.+.......... .....++..+|..+. ..|++++|+..++++++..+. .+.++
T Consensus 112 ~~~g~~~~A~~~~~~al~~~~~~~~~-~~~a~~~~~lg~~y~-----~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 185 (378)
T 3q15_A 112 FDQKEYVEAIGYYREAEKELPFVSDD-IEKAEFHFKVAEAYY-----HMKQTHVSMYHILQALDIYQNHPLYSIRTIQSL 185 (378)
T ss_dssp HHTTCHHHHHHHHHHHHTTGGGCCCH-HHHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHhhCCCh-HHHHHHHHHHHHHHH-----HcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHH
Confidence 35677788888887655543332211 122245556666665 899999999999999986442 35689
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhcCCC--CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----hCCCcHHHHH
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIEKWDGD--DQDLAQVYNALGVSYVREGKLDKGISQFETAVK-----LQPGYVTAWN 260 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----~~p~~~~~~~ 260 (316)
.++|.++...|++++|+++++++++..+.. .+....++.++|.+|..+|++++|+++++++++ .+|..+.+++
T Consensus 186 ~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 265 (378)
T 3q15_A 186 FVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLF 265 (378)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHH
Confidence 999999999999999999999999965432 234577899999999999999999999999999 7888899999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 021175 261 NLGDAYEKKKDLKSALKAFEEVLLFDPN 288 (316)
Q Consensus 261 ~lg~~~~~~g~~~~A~~~~~~al~~~p~ 288 (316)
++|.++..+|++++|..++++++++.+.
T Consensus 266 ~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 266 GLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998543
No 115
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.62 E-value=7.3e-15 Score=120.23 Aligned_cols=119 Identities=17% Similarity=0.202 Sum_probs=105.9
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCH----------------HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASA----------------TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQV 224 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~----------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~ 224 (316)
...|++++|+..|+++++..|+++ .++.++|.++...|++++|+.+++++++ .+|++..+
T Consensus 49 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~----~~p~~~~~ 124 (198)
T 2fbn_A 49 FKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK----IDKNNVKA 124 (198)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCcccHHH
Confidence 389999999999999999999887 8999999999999999999999999999 69999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSAL-KAFEEVL 283 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~-~~~~~al 283 (316)
++++|.++..+|++++|++.|+++++++|++..++..++.++...|+.+++. ..+.+.+
T Consensus 125 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 125 LYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998888777 4444443
No 116
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.62 E-value=1.9e-15 Score=136.93 Aligned_cols=146 Identities=13% Similarity=0.168 Sum_probs=66.7
Q ss_pred HhhhHHHHHHHHHHHHHc------CCCCHHHHHHHHHHHHHcCC-----------------hHHHHHHHHHHHHhcCC--
Q 021175 162 VRRELDLSAKELQEQVRS------GDASATEYFELGAVMLRRKF-----------------YPAATKYLLQAIEKWDG-- 216 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~------~p~~~~~~~~lg~~~~~~g~-----------------~~~A~~~~~~al~~~~~-- 216 (316)
..|++++|+..++++++. .|....++.++|.++...|+ +++|+++++++++..+.
T Consensus 138 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~ 217 (411)
T 4a1s_A 138 VMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLG 217 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcC
Confidence 445555555555554444 23334445555555555555 44555554444443211
Q ss_pred CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-
Q 021175 217 DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYV------TAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN- 289 (316)
Q Consensus 217 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~- 289 (316)
..+....++.++|.++...|++++|++++++++++.|... .++.++|.+|...|++++|+.++++++++.|+.
T Consensus 218 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 297 (411)
T 4a1s_A 218 DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELG 297 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcC
Confidence 1223334444455555555555555555555544443221 244445555555555555555555544444422
Q ss_pred -----hhHHHHHHHHHhhCCCCC
Q 021175 290 -----KVARPRRDALKDRVPLYK 307 (316)
Q Consensus 290 -----~~a~~~l~~l~~~~~~~~ 307 (316)
..++..++.++...|+++
T Consensus 298 ~~~~~~~~~~~la~~~~~~g~~~ 320 (411)
T 4a1s_A 298 EREVEAQSCYSLGNTYTLLHEFN 320 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCHH
Confidence 334444444444444443
No 117
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.62 E-value=1.6e-14 Score=119.89 Aligned_cols=142 Identities=15% Similarity=0.098 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC----ChHHHHHHHHHHHHhcCCCCccHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRK----FYPAATKYLLQAIEKWDGDDQDLA 222 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g----~~~~A~~~~~~al~~~~~~~p~~~ 222 (316)
++..+|..+. ..+++++|+..|+++.+. .++.+++++|.+|.. + ++++|+++|+++++ +.++
T Consensus 20 a~~~lg~~~~-----~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~------~g~~ 85 (212)
T 3rjv_A 20 AQYYLADTWV-----SSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE------AGSK 85 (212)
T ss_dssp HHHHHHHHHH-----HHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH------TTCH
T ss_pred HHHHHHHHHh-----cCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH------CCCH
Confidence 4444455554 688999999999998875 578999999999888 6 89999999999976 4678
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCChhH
Q 021175 223 QVYNALGVSYVR----EGKLDKGISQFETAVKLQP--GYVTAWNNLGDAYEK----KKDLKSALKAFEEVLLFDPNNKVA 292 (316)
Q Consensus 223 ~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p--~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a 292 (316)
.+++++|.+|.. .+++++|+++|+++++..| +++.++++||.+|.. .+++++|+.+|+++.+. |+++.+
T Consensus 86 ~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a 164 (212)
T 3rjv_A 86 SGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYA 164 (212)
T ss_dssp HHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHH
T ss_pred HHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHH
Confidence 899999999987 8899999999999999888 458999999999998 88999999999999988 777889
Q ss_pred HHHHHHHHhhC
Q 021175 293 RPRRDALKDRV 303 (316)
Q Consensus 293 ~~~l~~l~~~~ 303 (316)
..+++.++...
T Consensus 165 ~~~Lg~~y~~g 175 (212)
T 3rjv_A 165 EYWAGMMFQQG 175 (212)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcC
Confidence 99999988664
No 118
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.62 E-value=3.9e-15 Score=134.10 Aligned_cols=188 Identities=12% Similarity=0.054 Sum_probs=120.0
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------------HHHHHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRE--------------------LDLSAKELQE 175 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~A~~~~~~ 175 (316)
..++.+.|...++.+....+...... ....++..+|..+. ..|+ +++|+..+++
T Consensus 99 ~~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~~l~~~~~-----~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~ 172 (406)
T 3sf4_A 99 VLGNFDEAIVCCQRHLDISRELNDKV-GEARALYNLGNVYH-----AKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEE 172 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHHH-----HHHHTCC-------CCCCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHH-----HcCCcccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 45566666667665544443332111 11234444444444 6666 7777777777
Q ss_pred HHHc------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--CccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 176 QVRS------GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD--DQDLAQVYNALGVSYVREGKLDKGISQFET 247 (316)
Q Consensus 176 al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 247 (316)
+++. .|....++.++|.++...|++++|+++++++++..+.. .+....++.++|.++...|++++|++++++
T Consensus 173 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 252 (406)
T 3sf4_A 173 NLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKK 252 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 7664 23345577777777777777777777777777753321 122344777777777777777777777777
Q ss_pred HHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHhhCCCCCCC
Q 021175 248 AVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN------KVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 248 al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~l~~l~~~~~~~~~A 309 (316)
++++.|.. ..++.++|.+|...|++++|..++++++++.+.. ..++..++.++...|++++|
T Consensus 253 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 326 (406)
T 3sf4_A 253 TLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQA 326 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 77766544 5677777777777777777777777777765443 44666777777777776544
No 119
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.62 E-value=6.4e-15 Score=132.81 Aligned_cols=150 Identities=13% Similarity=0.079 Sum_probs=132.3
Q ss_pred HHHhhhHHHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC---CccHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGD------ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD---DQDLAQVYNALGV 230 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~p~~~~~~~~lg~ 230 (316)
....|++++|+..++++++..+ ..+.+++++|.++...|++++|+.+++++++..+.. .+..+.++.++|.
T Consensus 111 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~ 190 (378)
T 3q15_A 111 EFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAG 190 (378)
T ss_dssp HHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHH
Confidence 4489999999999999998633 346799999999999999999999999999976542 2356889999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----cCCCChhHHHHHHHH
Q 021175 231 SYVREGKLDKGISQFETAVKLQP------GYVTAWNNLGDAYEKKKDLKSALKAFEEVLL-----FDPNNKVARPRRDAL 299 (316)
Q Consensus 231 ~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~-----~~p~~~~a~~~l~~l 299 (316)
+|...|++++|++++++++++.+ ....++.++|.+|..+|++++|+.+++++++ .+|....++..++.+
T Consensus 191 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~ 270 (378)
T 3q15_A 191 NYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWT 270 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHH
Confidence 99999999999999999998743 1257899999999999999999999999999 788888999999999
Q ss_pred HhhCCCCCCC
Q 021175 300 KDRVPLYKGV 309 (316)
Q Consensus 300 ~~~~~~~~~A 309 (316)
+...|++++|
T Consensus 271 ~~~~g~~~~A 280 (378)
T 3q15_A 271 LCKAGQTQKA 280 (378)
T ss_dssp HHHTTCHHHH
T ss_pred HHHCCCHHHH
Confidence 9999998765
No 120
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.62 E-value=6e-15 Score=136.26 Aligned_cols=178 Identities=13% Similarity=0.073 Sum_probs=90.4
Q ss_pred cchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-
Q 021175 118 SENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLR- 196 (316)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~- 196 (316)
++.+.|...|+.+...+|...........+... ....++.++|++.++++++.+|+++.++.++|..+..
T Consensus 152 ~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~---------l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 152 NQNERAKVCFEKALEKKPKNPEFTSGLAIASYR---------LDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKM 222 (472)
T ss_dssp THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH---------HHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---------hcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 356677888887777766655333222111111 1123444455555555555555555555555544333
Q ss_pred ---cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc----
Q 021175 197 ---RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKK---- 269 (316)
Q Consensus 197 ---~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~---- 269 (316)
.|++++|+++++++++ .+|....++.++|.+|...|++++|++.++++++.+|+++.++.++|.+|...
T Consensus 223 ~~~~~~~~~a~~~~~~al~----~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~ 298 (472)
T 4g1t_A 223 REEGEEEGEGEKLVEEALE----KAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQV 298 (472)
T ss_dssp C------CHHHHHHHHHHH----HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHH----hCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHh
Confidence 2344555555555555 35555555555555555555555555555555555555555555555554322
Q ss_pred ---------------CCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCC
Q 021175 270 ---------------KDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 270 ---------------g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~ 308 (316)
+.+++|+..++++++++|++..++..++.++...|++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~ 352 (472)
T 4g1t_A 299 MNLRENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEE 352 (472)
T ss_dssp HHC------CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHH
Confidence 123445555555555555555555555555555555443
No 121
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.62 E-value=1.6e-14 Score=133.42 Aligned_cols=181 Identities=13% Similarity=0.037 Sum_probs=140.8
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHH-HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSY-LLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAV 193 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 193 (316)
...++.+.|...++.+..+.+...... .....++...|..+. ....+++++|++.|+++++.+|++++++..+|.+
T Consensus 105 ~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~ 181 (472)
T 4g1t_A 105 YHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRL---KCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIA 181 (472)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHH---HHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHH---HHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 456777777778876555443321000 000012222222222 1245789999999999999999999999999988
Q ss_pred HHH---cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 021175 194 MLR---RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR----EGKLDKGISQFETAVKLQPGYVTAWNNLGDAY 266 (316)
Q Consensus 194 ~~~---~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 266 (316)
+.. .+++++|++.++++++ ++|+++.++.++|..+.. .|++++|++.++++++.+|++..++.++|.+|
T Consensus 182 ~~~l~~~~~~~~al~~~~~al~----l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~ 257 (472)
T 4g1t_A 182 SYRLDNWPPSQNAIDPLRQAIR----LNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFY 257 (472)
T ss_dssp HHHHHHSCCCCCTHHHHHHHHH----HCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHhcCchHHHHHHHHHHHHhh----cCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHH
Confidence 654 5788999999999999 699999999999877665 46788999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 267 EKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 267 ~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
...|++++|+..++++++.+|++..++..++.++..
T Consensus 258 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~ 293 (472)
T 4g1t_A 258 RRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRA 293 (472)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988754
No 122
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.61 E-value=2.5e-15 Score=135.49 Aligned_cols=125 Identities=12% Similarity=0.204 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 021175 185 TEYFELGAVMLRRKFYPAATKYLLQAIEKWDG------------DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ 252 (316)
Q Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 252 (316)
..+..+|..+...|++++|++.|+++++..+. .+|.+..+++++|.+|..+|++++|+++++++++++
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 45777888888888888888888888873221 367788899999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 253 PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 253 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
|+++.+++++|.+|..+|++++|+..|+++++++|++..++..++.++..+++++++
T Consensus 304 p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a 360 (370)
T 1ihg_A 304 PSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDK 360 (370)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888887776544
No 123
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.61 E-value=6.6e-16 Score=143.94 Aligned_cols=127 Identities=20% Similarity=0.219 Sum_probs=116.0
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|++.|+++++.+|+++.++.++|.++...|++++|++.++++++ .+|+++.+++++|.+|..+|++++|
T Consensus 18 ~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----l~p~~~~~~~~lg~~~~~~g~~~eA 93 (477)
T 1wao_1 18 KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE----LDKKYIKGYYRRAASNMALGKFRAA 93 (477)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----SCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 789999999999999999999999999999999999999999999999999 7999999999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhcCCCChhH
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDA--YEKKKDLKSALKAFE-----------EVLLFDPNNKVA 292 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~--~~~~g~~~~A~~~~~-----------~al~~~p~~~~a 292 (316)
++.|+++++++|++..++.+++.+ +..+|++++|++.++ ++++++|+...+
T Consensus 94 ~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~ 157 (477)
T 1wao_1 94 LRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGP 157 (477)
T ss_dssp HHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSC
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccccc
Confidence 999999999999999999999998 889999999999999 888888875433
No 124
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.61 E-value=1.2e-15 Score=119.23 Aligned_cols=110 Identities=16% Similarity=0.214 Sum_probs=63.5
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
+.+.+++|++.++++++.+|+++++++++|.++...++++.+.+.. +.+++|
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al----------------------------~~~~eA 65 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAK----------------------------QMIQEA 65 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHH----------------------------HHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhH----------------------------hHHHHH
Confidence 5667777777777777777777777777777777777654111100 013355
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEKK-----------KDLKSALKAFEEVLLFDPNNKVARPRRDAL 299 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~~a~~~l~~l 299 (316)
+..|++|++++|++.++++++|.+|..+ |++++|+.+|+++++++|++...+..+..+
T Consensus 66 i~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 66 ITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 5555555555555555555555555444 255556666666666666555555554433
No 125
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.61 E-value=8.2e-15 Score=131.94 Aligned_cols=158 Identities=16% Similarity=0.120 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--
Q 021175 146 LGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA------TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD-- 217 (316)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-- 217 (316)
..+..+|..+. ..|++++|+..++++++..|... .++.++|.++...|++++|+.+++++++..+..
T Consensus 188 ~~~~~la~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 262 (406)
T 3sf4_A 188 RAFGNLGNTHY-----LLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 262 (406)
T ss_dssp HHHHHHHHHHH-----HHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcC
Confidence 34555555555 89999999999999998766443 489999999999999999999999999864321
Q ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---
Q 021175 218 DQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN--- 288 (316)
Q Consensus 218 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--- 288 (316)
.+....++.++|.++...|++++|++++++++++.+.. ..++..+|.+|...|++++|..++++++++.+.
T Consensus 263 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 342 (406)
T 3sf4_A 263 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGD 342 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTC
T ss_pred chHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcC
Confidence 22337889999999999999999999999999986543 678999999999999999999999999998443
Q ss_pred ---ChhHHHHHHHHHhhCCCCCC
Q 021175 289 ---NKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 289 ---~~~a~~~l~~l~~~~~~~~~ 308 (316)
...++..++.++...|+...
T Consensus 343 ~~~~~~~~~~l~~~~~~~g~~~~ 365 (406)
T 3sf4_A 343 KSGELTARLNLSDLQMVLGLSYS 365 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CcchhHHHHHHHHHHHHhhHhHH
Confidence 36778889999999988743
No 126
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.61 E-value=1.5e-14 Score=125.92 Aligned_cols=150 Identities=13% Similarity=0.098 Sum_probs=127.7
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCH------HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--CccHHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASA------TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD--DQDLAQVYNALGVS 231 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~p~~~~~~~~lg~~ 231 (316)
+...|++++|++.++++++..+... ..++.+|..+...|++++|+++++++++..... ......+++++|.+
T Consensus 85 ~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 164 (293)
T 2qfc_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANI 164 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 4489999999999999999887654 356788999999999999999999999854321 12346799999999
Q ss_pred HHHcCCHHHHHHHHHHHH---HhCCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------ChhHHHHHHH
Q 021175 232 YVREGKLDKGISQFETAV---KLQPGY----VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN------NKVARPRRDA 298 (316)
Q Consensus 232 ~~~~g~~~~A~~~~~~al---~~~p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~l~~ 298 (316)
|..+|++++|+++|++++ +..|++ ..+++++|.+|..+|++++|+.++++++++.++ ...++.++|.
T Consensus 165 y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~ 244 (293)
T 2qfc_A 165 YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGE 244 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 999999999999999999 556664 268999999999999999999999999988643 2678899999
Q ss_pred HHhhCCCCCCC
Q 021175 299 LKDRVPLYKGV 309 (316)
Q Consensus 299 l~~~~~~~~~A 309 (316)
++..+|++++|
T Consensus 245 ~y~~~g~~~~A 255 (293)
T 2qfc_A 245 CLRKLEYEEAE 255 (293)
T ss_dssp HHHHTTCCHHH
T ss_pred HHHHcCCcHHH
Confidence 99999998765
No 127
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.61 E-value=1.9e-14 Score=109.51 Aligned_cols=107 Identities=11% Similarity=0.163 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC---ccHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDD---QDLAQ 223 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~---p~~~~ 223 (316)
++..+|..+. ..|++++|++.|+++++.+|+++.++.++|.++...|++++|++.+++++++.+... +..+.
T Consensus 10 a~~~lG~~~~-----~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~ 84 (127)
T 4gcn_A 10 AEKDLGNAAY-----KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAK 84 (127)
T ss_dssp HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHH-----HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHH
Confidence 4444555555 999999999999999999999999999999999999999999999999999533211 12357
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 021175 224 VYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAW 259 (316)
Q Consensus 224 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 259 (316)
++.++|.++..+|++++|++.|+++++.+|+ ++..
T Consensus 85 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~ 119 (127)
T 4gcn_A 85 AMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELV 119 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHH
Confidence 8999999999999999999999999999886 4433
No 128
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.61 E-value=9.9e-15 Score=126.92 Aligned_cols=154 Identities=6% Similarity=-0.022 Sum_probs=137.9
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVM 194 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 194 (316)
...++.+.|...|+.+...+|.... ++..++..+. ..|++++|+..+++++..+|+........+..+
T Consensus 128 ~~~g~~~~A~~~~~~al~~~P~~~~-------a~~~la~~~~-----~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l 195 (287)
T 3qou_A 128 MQESNYTDALPLLXDAWQLSNQNGE-------IGLLLAETLI-----ALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIEL 195 (287)
T ss_dssp HHTTCHHHHHHHHHHHHHHTTSCHH-------HHHHHHHHHH-----HTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHH
T ss_pred HhCCCHHHHHHHHHHHHHhCCcchh-------HHHHHHHHHH-----HCCCHHHHHHHHHhCchhhcchHHHHHHHHHHH
Confidence 4677888888899877777777653 3444444454 899999999999999999998888888888889
Q ss_pred HHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCH
Q 021175 195 LRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY--VTAWNNLGDAYEKKKDL 272 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~~~~~lg~~~~~~g~~ 272 (316)
...++.++|++.++++++ .+|+++.+++++|.++...|++++|++.|+++++.+|++ ..++.++|.++...|+.
T Consensus 196 ~~~~~~~~a~~~l~~al~----~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~ 271 (287)
T 3qou_A 196 LXQAADTPEIQQLQQQVA----ENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTG 271 (287)
T ss_dssp HHHHTSCHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTT
T ss_pred HhhcccCccHHHHHHHHh----cCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCC
Confidence 999999999999999999 699999999999999999999999999999999999998 89999999999999999
Q ss_pred HHHHHHHHHHHh
Q 021175 273 KSALKAFEEVLL 284 (316)
Q Consensus 273 ~~A~~~~~~al~ 284 (316)
++|...|++++.
T Consensus 272 ~~a~~~~r~al~ 283 (287)
T 3qou_A 272 DALASXYRRQLY 283 (287)
T ss_dssp CHHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 999999999875
No 129
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.60 E-value=4.5e-15 Score=134.50 Aligned_cols=186 Identities=15% Similarity=0.101 Sum_probs=152.8
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHc------CCCCHHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRS------GDASATEYFE 189 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~------~p~~~~~~~~ 189 (316)
..++...|...++.+....+.... ....++..+|..+. ..|++++|+..++++++. .|....++..
T Consensus 60 ~~g~~~~A~~~~~~al~~~~~~~~---~~~~~~~~lg~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 131 (411)
T 4a1s_A 60 NAGDCRAGVAFFQAAIQAGTEDLR---TLSAIYSQLGNAYF-----YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGN 131 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHH---HHHHHHHHHHHHHH-----HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHhcccChh---HHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHH
Confidence 556777888888866665554321 11124445555555 899999999999999987 5677889999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHH
Q 021175 190 LGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGK-----------------LDKGISQFETAVK 250 (316)
Q Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~-----------------~~~A~~~~~~al~ 250 (316)
+|.++...|++++|+++++++++..+. ..|....++.++|.+|...|+ +++|+++++++++
T Consensus 132 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~ 211 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLK 211 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999995332 256778899999999999999 9999999999998
Q ss_pred hC------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChh------HHHHHHHHHhhCCCCCCC
Q 021175 251 LQ------PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKV------ARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 251 ~~------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~------a~~~l~~l~~~~~~~~~A 309 (316)
+. +....++.++|.+|...|++++|+.++++++++.|+... ++..++.++...|++++|
T Consensus 212 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 282 (411)
T 4a1s_A 212 LMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDA 282 (411)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHH
Confidence 74 334678999999999999999999999999999887655 889999999999998755
No 130
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.60 E-value=4.7e-15 Score=128.61 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=117.1
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..|+++++.+|+++.++.++|.++...|++++|++.++++++ .+|++..+++++|.++..+|++++
T Consensus 15 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~ 90 (281)
T 2c2l_A 15 FVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE----LDGQSVKAHFFLGQCQLEMESYDE 90 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTT----SCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHH
Confidence 3899999999999999999999999999999999999999999999999999 799999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcH-----H--------------------------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 021175 241 GISQFETAVKLQPGYV-----T--------------------------AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN 289 (316)
Q Consensus 241 A~~~~~~al~~~p~~~-----~--------------------------~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 289 (316)
|++.|+++++++|++. . +...++.. ..|++++|++.++++++.+|++
T Consensus 91 A~~~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 91 AIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccch
Confidence 9999999999988651 1 11222222 3688999999999999999988
Q ss_pred hhHHHHHHHHHh
Q 021175 290 KVARPRRDALKD 301 (316)
Q Consensus 290 ~~a~~~l~~l~~ 301 (316)
......++.+..
T Consensus 169 ~~~~~~l~~~~~ 180 (281)
T 2c2l_A 169 GHIRAQQACIEA 180 (281)
T ss_dssp HHHTHHHHHHHH
T ss_pred hhhhhHHHHHHH
Confidence 766666654443
No 131
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.60 E-value=1.3e-14 Score=126.69 Aligned_cols=189 Identities=12% Similarity=0.071 Sum_probs=146.9
Q ss_pred hhccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------------HHHHHHHHH
Q 021175 115 ANASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRE--------------------LDLSAKELQ 174 (316)
Q Consensus 115 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~A~~~~~ 174 (316)
...++.+.|...++.+....+....... ...++..++..+. ..|+ +++|++.++
T Consensus 94 ~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~ 167 (338)
T 3ro2_A 94 KVLGNFDEAIVCCQRHLDISRELNDKVG-EARALYNLGNVYH-----AKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYE 167 (338)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHHH-----HHHHTSSSSSCC----CCHHHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHH-----HcCcccccchhhhhhhhhhhHHHHHHHHHHHHH
Confidence 3556777777777655444443321111 1234455555554 7788 999999999
Q ss_pred HHHHc------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCCHHHHHHHHH
Q 021175 175 EQVRS------GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGKLDKGISQFE 246 (316)
Q Consensus 175 ~al~~------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 246 (316)
++++. .+....++.++|.++...|++++|+++++++++..+. ..+....++.++|.++...|++++|++.++
T Consensus 168 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 247 (338)
T 3ro2_A 168 ENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYK 247 (338)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 98875 3344678999999999999999999999999986432 123345689999999999999999999999
Q ss_pred HHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHhhCCCCCCC
Q 021175 247 TAVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN------KVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 247 ~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~l~~l~~~~~~~~~A 309 (316)
+++++.|.. ..++..+|.++...|++++|..++++++++.|.. ..++..++.++...|++++|
T Consensus 248 ~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 322 (338)
T 3ro2_A 248 KTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 322 (338)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHH
Confidence 999987655 7789999999999999999999999999986654 44788899999999988755
No 132
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.60 E-value=4.9e-15 Score=130.02 Aligned_cols=132 Identities=12% Similarity=0.058 Sum_probs=102.2
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC--ccHHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDA------SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDD--QDLAQVYNALGVS 231 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--p~~~~~~~~lg~~ 231 (316)
+...|++++|+..|+++++..+. ...++.++|.+|.. |++++|+++|+++++..+... +....++.++|.+
T Consensus 86 ~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~ 164 (307)
T 2ifu_A 86 LKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRL 164 (307)
T ss_dssp HHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHH
Confidence 33678888888888888876432 24678888888888 888888888888888644211 1236778888888
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHH
Q 021175 232 YVREGKLDKGISQFETAVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVAR 293 (316)
Q Consensus 232 ~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 293 (316)
|..+|++++|+++|++++++.|++ ..++.++|.++..+|++++|+.+|++++ ++|+.....
T Consensus 165 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~~~ 231 (307)
T 2ifu_A 165 LVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSGSE 231 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTTSH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCCCH
Confidence 888888888888888888876543 3477788888888888888888888888 888887764
No 133
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.59 E-value=8.2e-15 Score=115.99 Aligned_cols=108 Identities=8% Similarity=0.121 Sum_probs=99.3
Q ss_pred HHhhhHHHHHHHHHHHHHc------------------CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHH
Q 021175 161 LVRRELDLSAKELQEQVRS------------------GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLA 222 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~------------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~ 222 (316)
+..|++++|+..|+++++. +|....++.++|.++...|++++|+..++++++ ++|+++
T Consensus 22 ~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~----~~p~~~ 97 (162)
T 3rkv_A 22 FVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLK----REETNE 97 (162)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HSTTCH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh----cCCcch
Confidence 3899999999999999998 777789999999999999999999999999999 699999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-HHHHHHHHHHHHcCCH
Q 021175 223 QVYNALGVSYVREGKLDKGISQFETAVKLQPGYV-TAWNNLGDAYEKKKDL 272 (316)
Q Consensus 223 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-~~~~~lg~~~~~~g~~ 272 (316)
.+++++|.++..+|++++|++.|+++++++|++. .+...++.+....++.
T Consensus 98 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~ 148 (162)
T 3rkv_A 98 KALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEK 148 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 6777888777655443
No 134
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.59 E-value=3.1e-14 Score=123.90 Aligned_cols=165 Identities=8% Similarity=0.041 Sum_probs=126.0
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC------HHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS------ATEYFE 189 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 189 (316)
..++.+.+...++.+....+..+... .....+..++..+. ..+++++|+..++++++..+.. ..++.+
T Consensus 87 ~~~~y~~a~~~~~~~l~~~~~~~~~~-~~~~~~~~l~~~~~-----~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~ 160 (293)
T 3u3w_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQ-QFLQWQYYVAAYVL-----KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENA 160 (293)
T ss_dssp HTTCHHHHHHHHHHHHTTCCCCHHHH-HHHHHHHHHHHHHT-----TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhccccCChHHH-HHHHHHHHHHHHHH-----cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Confidence 45666777777765444333222211 11112223444443 6789999999999999965432 447999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhcCC---CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHH
Q 021175 190 LGAVMLRRKFYPAATKYLLQAIEKWDG---DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY------VTAWN 260 (316)
Q Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~ 260 (316)
+|.+|...|++++|+.+|+++++.... ..+....+++++|.+|..+|++++|++++++++++.+.. +.+++
T Consensus 161 lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~ 240 (293)
T 3u3w_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYY 240 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 999999999999999999999975432 345667799999999999999999999999999886443 88999
Q ss_pred HHHHHHHHcC-CHHHHHHHHHHHHhcC
Q 021175 261 NLGDAYEKKK-DLKSALKAFEEVLLFD 286 (316)
Q Consensus 261 ~lg~~~~~~g-~~~~A~~~~~~al~~~ 286 (316)
++|.+|..+| ++++|+++|++++.+.
T Consensus 241 ~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 241 QRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 9999999999 5799999999999864
No 135
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.59 E-value=7.3e-14 Score=104.05 Aligned_cols=106 Identities=25% Similarity=0.449 Sum_probs=101.4
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|++.++++++.+|++..++..+|.++...|++++|+.+++++++ ..|.+..++.++|.++...|++++
T Consensus 20 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~la~~~~~~~~~~~ 95 (125)
T 1na0_A 20 YKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNNAEAWYNLGNAYYKQGDYDE 95 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHhcCHHH
Confidence 3899999999999999999999999999999999999999999999999999 588889999999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAYEKKK 270 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 270 (316)
|++.++++++.+|++..++..+|.++...|
T Consensus 96 A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 96 AIEYYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999999999999999987765
No 136
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.59 E-value=1.6e-14 Score=113.05 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=90.5
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCC-------CHH-----HHHHHHHHHHHcCChHHHHHHHHHHHHhcC---CCCccHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDA-------SAT-----EYFELGAVMLRRKFYPAATKYLLQAIEKWD---GDDQDLAQV 224 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~-------~~~-----~~~~lg~~~~~~g~~~~A~~~~~~al~~~~---~~~p~~~~~ 224 (316)
....|++++|+..|+++++.+|+ +.. +|.++|.++...|+|++|+.+++++++++. +++|+++.+
T Consensus 21 l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A 100 (159)
T 2hr2_A 21 QLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKL 100 (159)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHH
Confidence 33899999999999999999999 444 999999999999999999999999999210 029999999
Q ss_pred H----HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 021175 225 Y----NALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNL 262 (316)
Q Consensus 225 ~----~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 262 (316)
| +++|.++..+|++++|++.|+++++++|++..+.-.+
T Consensus 101 ~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~ 142 (159)
T 2hr2_A 101 WISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGK 142 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTH
T ss_pred HHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 9 9999999999999999999999999999885544333
No 137
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.59 E-value=1.1e-14 Score=119.89 Aligned_cols=119 Identities=13% Similarity=0.168 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLG 263 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 263 (316)
...++++|..+...|++++|++.|++++. | ++.+++++|.++...|++++|++.|+++++++|+++.+++++|
T Consensus 6 ~~~~~~~g~~~~~~~~~~~A~~~~~~a~~------~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg 78 (213)
T 1hh8_A 6 AISLWNEGVLAADKKDWKGALDAFSAVQD------P-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRG 78 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHTSSS------C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHcC------C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 34578999999999999999999999853 2 5679999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcCCCCh----------------hHHHHHHHHHhhCCCCCCC
Q 021175 264 DAYEKKKDLKSALKAFEEVLLFDPNNK----------------VARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 264 ~~~~~~g~~~~A~~~~~~al~~~p~~~----------------~a~~~l~~l~~~~~~~~~A 309 (316)
.+|...|++++|+..|+++++..|++. .++.+++.++...|++++|
T Consensus 79 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 140 (213)
T 1hh8_A 79 MLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKA 140 (213)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHH
Confidence 999999999999999999999999877 9999999999999998755
No 138
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.58 E-value=8.1e-15 Score=127.94 Aligned_cols=188 Identities=14% Similarity=0.113 Sum_probs=147.6
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC------HHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS------ATEYFE 189 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 189 (316)
..++...+...++.+........... ....++..++..+. ..|++++|+..++++++..+.. ..++..
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~~~~-~~~~~~~~l~~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 128 (338)
T 3ro2_A 55 YLHDYAKALEYHHHDLTLARTIGDQL-GEAKASGNLGNTLK-----VLGNFDEAIVCCQRHLDISRELNDKVGEARALYN 128 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHH-HHHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHhhcccccH-HHHHHHHHHHHHHH-----HccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 45666777777765444433222111 11234455555554 8999999999999999876543 458999
Q ss_pred HHHHHHHcCC--------------------hHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 190 LGAVMLRRKF--------------------YPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGKLDKGISQFET 247 (316)
Q Consensus 190 lg~~~~~~g~--------------------~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 247 (316)
+|.++...|+ +++|+++++++++..+. ..+....++.++|.++...|++++|++.+++
T Consensus 129 l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 208 (338)
T 3ro2_A 129 LGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQ 208 (338)
T ss_dssp HHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999 99999999999885332 2456678999999999999999999999999
Q ss_pred HHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHhhCCCCCCC
Q 021175 248 AVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN------KVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 248 al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~l~~l~~~~~~~~~A 309 (316)
++++.+.. ..++.++|.++...|++++|..++++++++.|+. ..++..++.++...|++++|
T Consensus 209 a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 282 (338)
T 3ro2_A 209 RLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKA 282 (338)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHH
Confidence 99886543 3489999999999999999999999999987765 67788999999999998765
No 139
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.58 E-value=4.8e-15 Score=115.79 Aligned_cols=95 Identities=17% Similarity=0.113 Sum_probs=53.3
Q ss_pred HHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHH
Q 021175 128 EIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYL 207 (316)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 207 (316)
+++..+.......+... .+++..|..+. ..++++.+.... +.+++|+..|
T Consensus 20 eA~~~~~~Ai~l~P~~a-ea~~n~G~~l~-----~l~~~~~g~~al------------------------~~~~eAi~~l 69 (158)
T 1zu2_A 20 QIRQDAENTYKSNPLDA-DNLTRWGGVLL-----ELSQFHSISDAK------------------------QMIQEAITKF 69 (158)
T ss_dssp HHHHHHHHHHHHCTTCH-HHHHHHHHHHH-----HHHHHSCHHHHH------------------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCH-HHHHHHHHHHH-----HhcccchhhhhH------------------------hHHHHHHHHH
Confidence 44455555555555444 56676777665 444443211111 1244555555
Q ss_pred HHHHHhcCCCCccHHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHHhCCCcH
Q 021175 208 LQAIEKWDGDDQDLAQVYNALGVSYVRE-----------GKLDKGISQFETAVKLQPGYV 256 (316)
Q Consensus 208 ~~al~~~~~~~p~~~~~~~~lg~~~~~~-----------g~~~~A~~~~~~al~~~p~~~ 256 (316)
+++++ ++|++..+|+++|.+|..+ |++++|+++|++|++++|++.
T Consensus 70 e~AL~----ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 70 EEALL----IDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHH----HCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHH----hCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 55555 3555555555555555444 578888888888888888864
No 140
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.58 E-value=1e-14 Score=109.99 Aligned_cols=94 Identities=19% Similarity=0.120 Sum_probs=84.6
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
+...|++++|+..++++++.+|+++.+++.+|.++...|++++|+..|+++++ .+|+++.+++++|.++...|+++
T Consensus 27 ~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~----l~P~~~~~~~~la~~~~~~g~~~ 102 (121)
T 1hxi_A 27 MLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARM----LDPKDIAVHAALAVSHTNEHNAN 102 (121)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHH
Confidence 34899999999999999999999999999999999999999999999999999 69999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHH
Q 021175 240 KGISQFETAVKLQPGYVT 257 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~ 257 (316)
+|++.++++++++|++..
T Consensus 103 ~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 103 AALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHhCcCCCC
Confidence 999999999999998754
No 141
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.58 E-value=8.1e-16 Score=143.32 Aligned_cols=125 Identities=19% Similarity=0.264 Sum_probs=115.4
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNL 262 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 262 (316)
.+.++.++|..+...|++++|+++|+++++ .+|+++.++.++|.++..+|++++|++.++++++++|+++.+++++
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 80 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIE----LNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 80 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 345577888899999999999999999999 6999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHH--HhhCCCCCCCCC
Q 021175 263 GDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDAL--KDRVPLYKGVPV 311 (316)
Q Consensus 263 g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l--~~~~~~~~~A~~ 311 (316)
|.+|..+|++++|++.|+++++++|++..++..++.+ +...|++++|..
T Consensus 81 g~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~ 131 (477)
T 1wao_1 81 AASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIA 131 (477)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC--
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999988 677788877743
No 142
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.58 E-value=2.6e-14 Score=125.35 Aligned_cols=147 Identities=10% Similarity=0.099 Sum_probs=115.9
Q ss_pred HhhhHHHHHHHHHHHHHcCCC------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC-Cc-cHHHHHHHHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDA------SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD-DQ-DLAQVYNALGVSYV 233 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~p-~~~~~~~~lg~~~~ 233 (316)
..|++++|+..|.++++..+. ...++.++|.+|...|++++|+.+|++++++.... ++ ....++.++|.+|.
T Consensus 48 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~ 127 (307)
T 2ifu_A 48 NAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLME 127 (307)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 678888888888888876542 38888899999998899999999999988865432 22 34678888898888
Q ss_pred HcCCHHHHHHHHHHHHHhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh------hHHHHHHHHHh
Q 021175 234 REGKLDKGISQFETAVKLQPGY------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNK------VARPRRDALKD 301 (316)
Q Consensus 234 ~~g~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~------~a~~~l~~l~~ 301 (316)
. |++++|+++|++++++.|.. ..++.++|.+|..+|++++|+.+|++++++.|++. .++..++.++.
T Consensus 128 ~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~ 206 (307)
T 2ifu_A 128 P-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQL 206 (307)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred c-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHH
Confidence 8 99999999999998887643 57788889999999999999999999888866543 36677777888
Q ss_pred hCCCCCCC
Q 021175 302 RVPLYKGV 309 (316)
Q Consensus 302 ~~~~~~~A 309 (316)
..|++++|
T Consensus 207 ~~g~~~~A 214 (307)
T 2ifu_A 207 HRADYVAA 214 (307)
T ss_dssp HTTCHHHH
T ss_pred HcCCHHHH
Confidence 77876544
No 143
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.58 E-value=2.2e-15 Score=134.26 Aligned_cols=112 Identities=16% Similarity=0.141 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHH-----------------HHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 185 TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLA-----------------QVYNALGVSYVREGKLDKGISQFET 247 (316)
Q Consensus 185 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~-----------------~~~~~lg~~~~~~g~~~~A~~~~~~ 247 (316)
..+..+|..+...|+|++|+.+|+++++ ..|++. .+++++|.+|..+|++++|++.|++
T Consensus 180 ~~~~~~g~~~~~~g~~~~A~~~y~~Al~----~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~ 255 (338)
T 2if4_A 180 DRRKMDGNSLFKEEKLEEAMQQYEMAIA----YMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNI 255 (338)
T ss_dssp HHHHHHHHHTCSSSCCHHHHHHHHHHHH----HSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH----HhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3455555555555555555555555555 244443 2555666666666666666666666
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 021175 248 AVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALK 300 (316)
Q Consensus 248 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~ 300 (316)
+++++|++..+++++|.+|..+|++++|+.+|+++++++|++..++..++.+.
T Consensus 256 al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~ 308 (338)
T 2if4_A 256 VLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALA 308 (338)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC----------------
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 66666666666666666666666666666666666666666665555555553
No 144
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.58 E-value=9.6e-14 Score=102.42 Aligned_cols=103 Identities=12% Similarity=0.115 Sum_probs=98.5
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
+...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++ ..|.++.++.++|.++...|+++
T Consensus 14 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~~~ 89 (118)
T 1elw_A 14 ALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD----LKPDWGKGYSRKAAALEFLNRFE 89 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHH----hCcccHHHHHHHHHHHHHHhhHH
Confidence 34899999999999999999999999999999999999999999999999999 58999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 021175 240 KGISQFETAVKLQPGYVTAWNNLGDAY 266 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~~~~~lg~~~ 266 (316)
+|++.++++++.+|++..++..++.+.
T Consensus 90 ~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 90 EAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 999999999999999999999998775
No 145
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.57 E-value=9.6e-14 Score=120.74 Aligned_cols=165 Identities=8% Similarity=0.038 Sum_probs=123.6
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC------HHHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS------ATEYFE 189 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~ 189 (316)
..++.+.+...+..+....+....... ........+..+. ..|++++|+..++++++..+.. ..++.+
T Consensus 87 ~~~~y~~A~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 160 (293)
T 2qfc_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQ-FLQWQYYVAAYVL-----KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENA 160 (293)
T ss_dssp HTTCHHHHHHHHHHHHHTCCCCHHHHH-HHHHHHHHHHHHH-----TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHhccccCChhHHH-HHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 456666766676643333332221111 1122233344443 7889999999999999865543 669999
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhcCCC--Ccc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHH
Q 021175 190 LGAVMLRRKFYPAATKYLLQAIEKWDGD--DQD-LAQVYNALGVSYVREGKLDKGISQFETAVKLQPG------YVTAWN 260 (316)
Q Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~--~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~ 260 (316)
+|.+|...|++++|+.+|+++++..... ++. ...+++++|.+|..+|++++|++++++++++.++ ...+++
T Consensus 161 lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~ 240 (293)
T 2qfc_A 161 IANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYY 240 (293)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 9999999999999999999999543221 222 3379999999999999999999999999987643 278999
Q ss_pred HHHHHHHHcCCHHHH-HHHHHHHHhcC
Q 021175 261 NLGDAYEKKKDLKSA-LKAFEEVLLFD 286 (316)
Q Consensus 261 ~lg~~~~~~g~~~~A-~~~~~~al~~~ 286 (316)
++|.+|..+|++++| ..++++++.+.
T Consensus 241 ~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 241 QRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 999999999999999 88899999764
No 146
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.57 E-value=1.3e-13 Score=130.96 Aligned_cols=174 Identities=9% Similarity=0.002 Sum_probs=151.8
Q ss_pred chHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhh----------HHHHHHHHHHHHHcCCCCHHHHH
Q 021175 119 ENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRE----------LDLSAKELQEQVRSGDASATEYF 188 (316)
Q Consensus 119 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~A~~~~~~al~~~p~~~~~~~ 188 (316)
-.+.|...++.+..+.|.....+..- +.... ..++ ++++++.++++++.+|++..+|+
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R-------~~~l~-----~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~ 111 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCR-------REVLQ-----HLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWH 111 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHH-------HHHHH-----HHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHH-------HHHHH-----hcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHH
Confidence 34566778887777777766433332 22222 2333 89999999999999999999999
Q ss_pred HHHHHHHHcC--ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 021175 189 ELGAVMLRRK--FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREG-KLDKGISQFETAVKLQPGYVTAWNNLGDA 265 (316)
Q Consensus 189 ~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 265 (316)
..+.++...+ ++++++++++++++ .+|.+..+|.+.+.+....| .+++++++++++++.+|++..+|+++|.+
T Consensus 112 hR~w~l~~l~~~~~~~el~~~~k~l~----~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 112 HRCWLLSRLPEPNWARELELCARFLE----ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp HHHHHHHTCSSCCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcccccHHHHHHHHHHHHh----hccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 9999999999 66999999999999 69999999999999999999 99999999999999999999999999999
Q ss_pred HHHc--------------CCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCC
Q 021175 266 YEKK--------------KDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 266 ~~~~--------------g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~ 308 (316)
+... +++++|++++++++.++|++..+|..++.+....+.+++
T Consensus 188 l~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~ll~~~~~~~~ 244 (567)
T 1dce_A 188 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHDV 244 (567)
T ss_dssp HHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCCSC
T ss_pred HHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHHHhcCCCccc
Confidence 9885 668999999999999999999999999999999888655
No 147
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.56 E-value=3.2e-14 Score=123.77 Aligned_cols=150 Identities=13% Similarity=0.090 Sum_probs=124.5
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC--ccHHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASAT------EYFELGAVMLRRKFYPAATKYLLQAIEKWDGDD--QDLAQVYNALGVS 231 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~------~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--p~~~~~~~~lg~~ 231 (316)
....+++++|+..++++++..+..+. .+..+|..+...+++++|+++++++++...... .....++.++|.+
T Consensus 85 ~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 164 (293)
T 3u3w_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANI 164 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHH
Confidence 44899999999999999998776654 344689999999999999999999999533211 1235689999999
Q ss_pred HHHcCCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------hhHHHHHHH
Q 021175 232 YVREGKLDKGISQFETAVKLQ-------PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN------KVARPRRDA 298 (316)
Q Consensus 232 ~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~l~~ 298 (316)
|..+|++++|+++|+++++.. +....+++++|.+|..+|++++|+.++++++++.++. +.++.++|.
T Consensus 165 y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~ 244 (293)
T 3u3w_A 165 YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGE 244 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 999999999999999999531 2235689999999999999999999999999986554 678999999
Q ss_pred HHhhCCCC-CCC
Q 021175 299 LKDRVPLY-KGV 309 (316)
Q Consensus 299 l~~~~~~~-~~A 309 (316)
++..+|+. ++|
T Consensus 245 ~~~~~g~~~~~A 256 (293)
T 3u3w_A 245 CLRKLEYEEAEI 256 (293)
T ss_dssp HHHHTTCCHHHH
T ss_pred HHHHhCCcHHHH
Confidence 99999953 544
No 148
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.56 E-value=3e-14 Score=123.51 Aligned_cols=106 Identities=19% Similarity=0.270 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHH
Q 021175 181 DASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWN 260 (316)
Q Consensus 181 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 260 (316)
|+.+..+..+|..+...|++++|+..|+++++ .+|+++.+++++|.++..+|++++|++.++++++++|++..+++
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 76 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHF 76 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 56788999999999999999999999999999 69999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Q 021175 261 NLGDAYEKKKDLKSALKAFEEVLLFDPNNK 290 (316)
Q Consensus 261 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 290 (316)
++|.+|..+|++++|+..|+++++++|+++
T Consensus 77 ~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 77 FLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 999999999999999999999999999763
No 149
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.56 E-value=2.5e-14 Score=116.61 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH------cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--C
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVR------SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD--D 218 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~ 218 (316)
++..++..+. ..|++++|+..++++++ ..|....++.++|.++...|++++|+++++++++..... +
T Consensus 28 ~~~~l~~~~~-----~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 28 ARFMLGYVYA-----FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHH-----HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4444444444 77888888888888877 344456778888888888888888888888888754321 2
Q ss_pred c-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--c----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChh
Q 021175 219 Q-DLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG--Y----VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKV 291 (316)
Q Consensus 219 p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 291 (316)
| ....++.++|.++...|++++|++.+++++++.+. + ..++.++|.++...|++++|..++++++++......
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 182 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAELED 182 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 2 45667788888888888888888888888765321 1 345677888888888888888888888887766555
Q ss_pred HHHHHHHHHhhCC
Q 021175 292 ARPRRDALKDRVP 304 (316)
Q Consensus 292 a~~~l~~l~~~~~ 304 (316)
.+ ..+.+...++
T Consensus 183 ~~-~~~~~~~~~~ 194 (203)
T 3gw4_A 183 SE-AVNELMTRLN 194 (203)
T ss_dssp HH-HHHHHHHHHH
T ss_pred HH-HHHHHHhccc
Confidence 44 3344444333
No 150
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.56 E-value=4.3e-14 Score=107.97 Aligned_cols=107 Identities=18% Similarity=0.084 Sum_probs=98.4
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~ 240 (316)
...|++++|+..|+++++.+|+++.++.++|.++...|++++|+.+++++++ .+|+++.+++++|.++...|++++
T Consensus 20 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~~~~~~ 95 (137)
T 3q49_B 20 FVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALE----LDGQSVKAHFFLGQCQLEMESYDE 95 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCchhHHHHHHHHHHHHHHhhHHH
Confidence 3899999999999999999999999999999999999999999999999999 699999999999999999999999
Q ss_pred HHHHHHHHHHhCCC-----cHHHHHHHHHHHHHcCC
Q 021175 241 GISQFETAVKLQPG-----YVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 241 A~~~~~~al~~~p~-----~~~~~~~lg~~~~~~g~ 271 (316)
|++.|+++++++|+ +..+...+..+..+...
T Consensus 96 A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 96 AIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 67777777766655433
No 151
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.56 E-value=3.8e-14 Score=131.37 Aligned_cols=128 Identities=13% Similarity=0.138 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC---------------HHHHHHHHHHHHHcCChHHHHHHHHHH
Q 021175 146 LGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS---------------ATEYFELGAVMLRRKFYPAATKYLLQA 210 (316)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~---------------~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (316)
..+...|..+. ..|++++|+..|+++++.+|++ ..++.++|.++...|++++|+.+++++
T Consensus 269 ~~~~~~G~~~~-----~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 269 AIVKEKGTVYF-----KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34445555555 8999999999999999999988 699999999999999999999999999
Q ss_pred HHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH-HHHHH
Q 021175 211 IEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALK-AFEEV 282 (316)
Q Consensus 211 l~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~-~~~~a 282 (316)
++ ++|+++.+++++|.+|..+|++++|+..|+++++++|++..++.+++.++..+|++++|.. .|++.
T Consensus 344 l~----~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 344 LG----LDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANM 412 (457)
T ss_dssp HH----HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred Hh----cCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 6999999999999999999999999999999999999999999999999999999988775 34433
No 152
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.55 E-value=4.1e-15 Score=132.44 Aligned_cols=127 Identities=11% Similarity=0.138 Sum_probs=82.5
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCH-----------------HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASA-----------------TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQ 223 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~-----------------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~ 223 (316)
...|++++|+..|+++++..|++. .+++++|.++...|++++|+.+++++++ .+|++..
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~~~ 265 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLT----EEEKNPK 265 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHH----HCTTCHH
T ss_pred HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHH
Confidence 389999999999999999999876 4999999999999999999999999999 6999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCCCChh
Q 021175 224 VYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAY-EKKKDLKSALKAFEEVLLFDPNNKV 291 (316)
Q Consensus 224 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~~~p~~~~ 291 (316)
+++++|.+|..+|++++|++.|+++++++|++..++.+++.+. ...++.+++...|++++..+|+++.
T Consensus 266 a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 266 ALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999999999999999984 4567788999999999999998764
No 153
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=5.6e-13 Score=110.48 Aligned_cols=160 Identities=14% Similarity=0.079 Sum_probs=132.2
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 021175 117 ASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRR----ELDLSAKELQEQVRSGDASATEYFELGA 192 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~A~~~~~~al~~~p~~~~~~~~lg~ 192 (316)
.++..+|...|+.+. +.+.. .++..+|..+. . + ++++|+..|+++.+ +.++.+++++|.
T Consensus 31 ~~~~~~A~~~~~~a~--~~g~~-------~a~~~lg~~y~-----~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~ 93 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAA--AQGDG-------DALALLAQLKI-----R-NPQQADYPQARQLAEKAVE--AGSKSGEIVLAR 93 (212)
T ss_dssp HTCHHHHHHHHHHHH--HTTCH-------HHHHHHHHHTT-----S-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH--HcCCH-------HHHHHHHHHHH-----c-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHH
Confidence 467778888887443 33333 34445555554 3 5 89999999999965 578999999999
Q ss_pred HHHH----cCChHHHHHHHHHHHHhcCCCCc--cHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 021175 193 VMLR----RKFYPAATKYLLQAIEKWDGDDQ--DLAQVYNALGVSYVR----EGKLDKGISQFETAVKLQPGYVTAWNNL 262 (316)
Q Consensus 193 ~~~~----~g~~~~A~~~~~~al~~~~~~~p--~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~~~~~l 262 (316)
+|.. .+++++|+++|+++++ ..| .++.++++||.+|.. .+++++|+++|+++++. |.++.+++++
T Consensus 94 ~y~~g~g~~~d~~~A~~~~~~A~~----~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~L 168 (212)
T 3rjv_A 94 VLVNRQAGATDVAHAITLLQDAAR----DSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWA 168 (212)
T ss_dssp HHTCGGGSSCCHHHHHHHHHHHTS----STTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHH----cCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHH
Confidence 9998 8999999999999999 566 569999999999999 89999999999999998 7788899999
Q ss_pred HHHHHHc-C-----CHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 021175 263 GDAYEKK-K-----DLKSALKAFEEVLLFDPNNKVARPRRDALK 300 (316)
Q Consensus 263 g~~~~~~-g-----~~~~A~~~~~~al~~~p~~~~a~~~l~~l~ 300 (316)
|.+|... | ++++|+.+|+++.+. +++.+...++.+.
T Consensus 169 g~~y~~g~gg~~~~d~~~A~~~~~~A~~~--g~~~A~~~l~~l~ 210 (212)
T 3rjv_A 169 GMMFQQGEKGFIEPNKQKALHWLNVSCLE--GFDTGCEEFDRIS 210 (212)
T ss_dssp HHHHHHCBTTTBCCCHHHHHHHHHHHHHH--TCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHhh
Confidence 9999874 3 899999999999987 4567777777664
No 154
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.54 E-value=6.3e-15 Score=110.24 Aligned_cols=98 Identities=13% Similarity=0.107 Sum_probs=87.5
Q ss_pred HhhhHHHHHHHHHHHHHc---CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCH
Q 021175 162 VRRELDLSAKELQEQVRS---GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKL 238 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~ 238 (316)
..|++++|+..|+++++. +|+++.++.++|.++...|++++|+++++++++ .+|+++.+++++|.++...|++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~ 77 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVK----QFPNHQALRVFYAMVLYNLGRY 77 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCchHHHHHHHHHHHHcCCH
Confidence 468899999999999999 588999999999999999999999999999999 6999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHH
Q 021175 239 DKGISQFETAVKLQPGYVTAWNNLG 263 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~lg 263 (316)
++|++.++++++.+|+++.......
T Consensus 78 ~~A~~~~~~al~~~p~~~~~~~~~~ 102 (117)
T 3k9i_A 78 EQGVELLLKIIAETSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHTHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 9999999999999999987765443
No 155
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.54 E-value=2.7e-13 Score=102.35 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=96.2
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCH---HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH---HHHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASA---TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL---AQVYNALGVSYV 233 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~---~~~~~~lg~~~~ 233 (316)
+...|++++|++.++++++.+|+++ .+++.+|.++...|++++|+..|+++++ ..|++ +.+++++|.++.
T Consensus 12 ~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~----~~p~~~~~~~~~~~la~~~~ 87 (129)
T 2xev_A 12 ALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVS----RYPTHDKAAGGLLKLGLSQY 87 (129)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTSTTHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHH----HCCCCcccHHHHHHHHHHHH
Confidence 4489999999999999999999988 8999999999999999999999999999 46766 899999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 021175 234 REGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 234 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 271 (316)
..|++++|++.|+++++.+|++..+......+....++
T Consensus 88 ~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 88 GEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 99999999999999999999998877766655544443
No 156
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.54 E-value=6.1e-13 Score=116.27 Aligned_cols=171 Identities=10% Similarity=-0.058 Sum_probs=150.3
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHcCCCCHHHHHHHHHHH---
Q 021175 120 NVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRR--ELDLSAKELQEQVRSGDASATEYFELGAVM--- 194 (316)
Q Consensus 120 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~A~~~~~~al~~~p~~~~~~~~lg~~~--- 194 (316)
.+.+..+++.+..++|..... +...+.... ..+ +++++++.+.+++..+|++..+|+..+.++
T Consensus 49 s~~aL~~t~~~L~~nP~~~ta-------Wn~R~~~L~-----~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~ 116 (306)
T 3dra_A 49 SERALHITELGINELASHYTI-------WIYRFNILK-----NLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQI 116 (306)
T ss_dssp SHHHHHHHHHHHHHCTTCHHH-------HHHHHHHHH-----TCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCcHHHHH-------HHHHHHHHH-----HcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHH
Confidence 455677777777777776533 333333332 455 899999999999999999999999999999
Q ss_pred -HHc---CChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 021175 195 -LRR---KFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD--KGISQFETAVKLQPGYVTAWNNLGDAYEK 268 (316)
Q Consensus 195 -~~~---g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 268 (316)
... +++++++++++++++ .+|.+..+|+..+.+....|+++ ++++.++++++.+|.+..+|.+.+.+...
T Consensus 117 ~~~l~~~~~~~~EL~~~~~~l~----~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~ 192 (306)
T 3dra_A 117 MELNNNDFDPYREFDILEAMLS----SDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFS 192 (306)
T ss_dssp HHHTTTCCCTHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHS
T ss_pred HHhccccCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 666 899999999999999 69999999999999999999999 99999999999999999999999999999
Q ss_pred cCC------HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 269 KKD------LKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 269 ~g~------~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
.|+ ++++++++++++..+|++..+|..++.+....|+.
T Consensus 193 l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~ 236 (306)
T 3dra_A 193 KKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRS 236 (306)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCC
T ss_pred ccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCC
Confidence 988 99999999999999999999999999999998875
No 157
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.53 E-value=4.5e-13 Score=126.16 Aligned_cols=171 Identities=13% Similarity=0.043 Sum_probs=141.1
Q ss_pred HHHHHHHHHhh-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHHcCC
Q 021175 122 QMDAVYEIGEL-FELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA-TEYFELGAVMLRRKF 199 (316)
Q Consensus 122 ~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~-~~~~~lg~~~~~~g~ 199 (316)
.|...++.+.. ..|.... .+...+.++. ..|++++|.+.|+++++.+|.++ .+|.++|..+.+.|+
T Consensus 304 ~A~~~~~~Al~~~~p~~~~-------l~~~~~~~~~-----~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 371 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNML-------LYFAYADYEE-----SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG 371 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHH-------HHHHHHHHHH-----HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHH-------HHHHHHHHHH-----hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcC
Confidence 67778875554 4444332 2333333443 78999999999999999999885 699999999999999
Q ss_pred hHHHHHHHHHHHHhcCCCCccHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 021175 200 YPAATKYLLQAIEKWDGDDQDLAQVYNALGVS-YVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKA 278 (316)
Q Consensus 200 ~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 278 (316)
+++|.+.|+++++ ..|.....+...+.+ +...|++++|.+.|+++++.+|+++.+|..++..+...|+.++|...
T Consensus 372 ~~~A~~~~~~Al~----~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~ 447 (530)
T 2ooe_A 372 IKSGRMIFKKARE----DARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVL 447 (530)
T ss_dssp HHHHHHHHHHHHT----CTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHH
T ss_pred HHHHHHHHHHHHh----ccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHH
Confidence 9999999999999 567666666666655 44699999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCChh----HHHHHHHHHhhCCCCCC
Q 021175 279 FEEVLLFDPNNKV----ARPRRDALKDRVPLYKG 308 (316)
Q Consensus 279 ~~~al~~~p~~~~----a~~~l~~l~~~~~~~~~ 308 (316)
|++++...|.+++ .|......+...|+.++
T Consensus 448 ~~~al~~~~~~~~~~~~lw~~~~~~e~~~G~~~~ 481 (530)
T 2ooe_A 448 FERVLTSGSLPPEKSGEIWARFLAFESNIGDLAS 481 (530)
T ss_dssp HHHHHHSCCSCGGGCHHHHHHHHHHHHHSSCHHH
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 9999999877665 77777778888887654
No 158
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.53 E-value=1.4e-13 Score=107.12 Aligned_cols=137 Identities=15% Similarity=0.126 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCC------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--C
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDAS------ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD--D 218 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~ 218 (316)
++..+|..+. ..|++++|+..++++++..+.. ..++.++|.++...|++++|+++++++++..+.. .
T Consensus 11 ~~~~l~~~~~-----~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 11 AFGNLGNTHY-----LLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHH-----HhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 3444444444 8999999999999999876532 3589999999999999999999999999965431 2
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG------YVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN 288 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 288 (316)
+....++.++|.++...|++++|++.+++++++.+. ...++.++|.++...|++++|.+++++++++...
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 234778999999999999999999999999987432 2678899999999999999999999999987554
No 159
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.53 E-value=1.9e-13 Score=128.70 Aligned_cols=143 Identities=13% Similarity=0.004 Sum_probs=130.0
Q ss_pred hhhHH-------HHHHHHHHHHH-cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHH-HHHHHHHHHHH
Q 021175 163 RRELD-------LSAKELQEQVR-SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLA-QVYNALGVSYV 233 (316)
Q Consensus 163 ~~~~~-------~A~~~~~~al~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~-~~~~~lg~~~~ 233 (316)
.|+++ +|++.++++++ ..|++...|..+|..+...|++++|.+.|+++++ .+|.++ .+|.++|.++.
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~ 367 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLA----IEDIDPTLVYIQYMKFAR 367 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----SSSSCHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhC----ccccCchHHHHHHHHHHH
Confidence 57766 99999999997 8999999999999999999999999999999999 678764 69999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 234 REGKLDKGISQFETAVKLQPGYVTAWNNLGDA-YEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 234 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~-~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+.|++++|.+.|++|++..|.....+...+.+ +...|++++|...|+++++.+|+++..+..++.++...|+.++|
T Consensus 368 ~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~A 444 (530)
T 2ooe_A 368 RAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNT 444 (530)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHH
T ss_pred HhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhH
Confidence 99999999999999999999888877776655 45699999999999999999999999999999999998887544
No 160
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.52 E-value=1.1e-13 Score=124.69 Aligned_cols=123 Identities=18% Similarity=0.224 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH----------------cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVR----------------SGDASATEYFELGAVMLRRKFYPAATKYLLQA 210 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 210 (316)
.+...|..+. ..|++++|++.|+++++ .+|....++.++|.++...|++++|+++++++
T Consensus 225 ~~~~~g~~~~-----~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~a 299 (370)
T 1ihg_A 225 DLKNIGNTFF-----KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEA 299 (370)
T ss_dssp HHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHH-----HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 3444444444 89999999999999998 77888999999999999999999999999999
Q ss_pred HHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 021175 211 IEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKA 278 (316)
Q Consensus 211 l~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 278 (316)
++ .+|+++.+++++|.+|..+|++++|++.|+++++++|++..++..++.++..+++++++.+.
T Consensus 300 l~----~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 300 LE----IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HT----TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HH----hCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 79999999999999999999999999999999999999999999999999999998887653
No 161
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=2.5e-13 Score=104.72 Aligned_cols=104 Identities=15% Similarity=0.122 Sum_probs=98.2
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCC
Q 021175 161 LVRRELDLSAKELQEQVRSGDAS---ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGK 237 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~ 237 (316)
...|++++|++.|+++++.+|++ ..++.++|.++...|++++|+++++++++ .+|+++.+++++|.++...|+
T Consensus 39 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~~~~~~~~a~~~~~~~~ 114 (148)
T 2dba_A 39 FKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIE----KDGGDVKALYRRSQALEKLGR 114 (148)
T ss_dssp HTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTSCCHHHHHHHHHHHHHHTC
T ss_pred HHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh----hCccCHHHHHHHHHHHHHcCC
Confidence 38999999999999999999987 89999999999999999999999999999 588899999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 021175 238 LDKGISQFETAVKLQPGYVTAWNNLGDAYEK 268 (316)
Q Consensus 238 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 268 (316)
+++|++.|+++++++|++..++..++.+...
T Consensus 115 ~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 115 LDQAVLDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999888877543
No 162
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.51 E-value=2.1e-14 Score=115.08 Aligned_cols=112 Identities=13% Similarity=0.159 Sum_probs=102.2
Q ss_pred HHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH-HHHcCCH
Q 021175 194 MLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDA-YEKKKDL 272 (316)
Q Consensus 194 ~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~-~~~~g~~ 272 (316)
+...|++++|++.++++++ .+|+++.+++.+|.++...|++++|++.|+++++++|+++.++.++|.+ +...|++
T Consensus 20 ~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~ 95 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIR----ANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQH 95 (177)
T ss_dssp CC-----CCCCHHHHHHHH----HCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTC
T ss_pred hhhccCHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCc
Confidence 3467899999999999999 5899999999999999999999999999999999999999999999999 8899999
Q ss_pred --HHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 273 --KSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 273 --~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
++|+.+++++++.+|++..++..++.++...|++++|
T Consensus 96 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A 134 (177)
T 2e2e_A 96 MTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQA 134 (177)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred chHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHH
Confidence 9999999999999999999999999999999998755
No 163
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.51 E-value=2.8e-13 Score=101.80 Aligned_cols=105 Identities=18% Similarity=0.230 Sum_probs=96.5
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH-------HHHHHHHHHHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL-------AQVYNALGVSYV 233 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~-------~~~~~~lg~~~~ 233 (316)
...|++++|+..++++++.+|+++.++.++|.++...|++++|+.+++++++. .|.+ ..+++++|.++.
T Consensus 15 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~~~~la~~~~ 90 (131)
T 1elr_A 15 YKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEV----GRENREDYRQIAKAYARIGNSYF 90 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH----HHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhh----ccccchhHHHHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999995 5544 889999999999
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 021175 234 REGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKK 270 (316)
Q Consensus 234 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g 270 (316)
..|++++|++.|+++++.+| +......++.+....+
T Consensus 91 ~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 91 KEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 99999999999999999999 5888888888776544
No 164
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.51 E-value=1.8e-13 Score=117.40 Aligned_cols=133 Identities=11% Similarity=-0.004 Sum_probs=119.1
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH-HHHHHHHHHHHHHcCCHH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL-AQVYNALGVSYVREGKLD 239 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~-~~~~~~lg~~~~~~g~~~ 239 (316)
...|++++|.+.|+..+..+|++. ..+.+|.++.+.++|++|+.+++++.+. .+|.. ..+++++|.++..+|+++
T Consensus 113 ~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~---~d~~~~~~a~~~LG~al~~LG~~~ 188 (282)
T 4f3v_A 113 AAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKW---PDKFLAGAAGVAHGVAAANLALFT 188 (282)
T ss_dssp HHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGC---SCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhcc---CCcccHHHHHHHHHHHHHHCCCHH
Confidence 389999999999999999999888 9999999999999999999999988772 13332 468999999999999999
Q ss_pred HHHHHHHHHHHhC--CC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 021175 240 KGISQFETAVKLQ--PG-YVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDA 298 (316)
Q Consensus 240 ~A~~~~~~al~~~--p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~ 298 (316)
+|+++|++++... |. ..++++++|.++.++|+.++|...|++++..+|+ +.++..|..
T Consensus 189 eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 189 EAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp HHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 9999999999654 66 6789999999999999999999999999999999 888887743
No 165
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.49 E-value=4.3e-13 Score=109.16 Aligned_cols=149 Identities=14% Similarity=0.123 Sum_probs=125.7
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCCH
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGKL 238 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~~ 238 (316)
+..|++++|.+.++......+..+.++..+|.++...|++++|+.+++++++.... ..|....++.++|.++...|++
T Consensus 3 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 82 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNW 82 (203)
T ss_dssp ----CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCH
T ss_pred cccccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCH
Confidence 36899999999666667788899999999999999999999999999999997654 3567889999999999999999
Q ss_pred HHHHHHHHHHHHh---CCC----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------hhHHHHHHHHHhhCCC
Q 021175 239 DKGISQFETAVKL---QPG----YVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN------KVARPRRDALKDRVPL 305 (316)
Q Consensus 239 ~~A~~~~~~al~~---~p~----~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~~l~~l~~~~~~ 305 (316)
++|++.+++++++ .++ ...++.++|.++...|++++|..++++++++.+.. ..++..++.++...|+
T Consensus 83 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 162 (203)
T 3gw4_A 83 DAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKN 162 (203)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcC
Confidence 9999999999998 442 35779999999999999999999999999764332 2335789999999999
Q ss_pred CCCC
Q 021175 306 YKGV 309 (316)
Q Consensus 306 ~~~A 309 (316)
+++|
T Consensus 163 ~~~A 166 (203)
T 3gw4_A 163 LLEA 166 (203)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8755
No 166
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.46 E-value=6.5e-12 Score=111.08 Aligned_cols=171 Identities=11% Similarity=0.003 Sum_probs=148.5
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc-
Q 021175 120 NVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRR-ELDLSAKELQEQVRSGDASATEYFELGAVMLRR- 197 (316)
Q Consensus 120 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~- 197 (316)
.+.+..+++.+..+++..... +...+.... ..+ .++++++.+.+++..+|++..+|+..+.++...
T Consensus 70 se~AL~lt~~~L~~nP~~yta-------Wn~R~~iL~-----~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~ 137 (349)
T 3q7a_A 70 SERALELTEIIVRMNPAHYTV-------WQYRFSLLT-----SLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRIS 137 (349)
T ss_dssp SHHHHHHHHHHHHHCTTCHHH-------HHHHHHHHH-----HTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHhCchhHHH-------HHHHHHHHH-----HhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhc
Confidence 445666777666677666533 333333332 455 599999999999999999999999999999998
Q ss_pred C-ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 021175 198 K-FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD--------KGISQFETAVKLQPGYVTAWNNLGDAYEK 268 (316)
Q Consensus 198 g-~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~--------~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 268 (316)
+ ++++++++++++++ .+|.+..+|...+.+....|+++ +++++++++++.+|.+..+|.+.+.+...
T Consensus 138 ~~~~~~EL~~~~k~L~----~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~ 213 (349)
T 3q7a_A 138 PQDPVSEIEYIHGSLL----PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVS 213 (349)
T ss_dssp CSCCHHHHHHHHHHTS----SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTT
T ss_pred CCChHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 8 99999999999999 79999999999999999998888 99999999999999999999999999999
Q ss_pred cCC-------HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 269 KKD-------LKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 269 ~g~-------~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
.++ ++++++++++++.++|++..+|..+..+....|+.
T Consensus 214 l~~~~~~~~~~~eELe~~~~aI~~~P~n~SaW~Ylr~Ll~~~~~~ 258 (349)
T 3q7a_A 214 RPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFSLP 258 (349)
T ss_dssp STTCCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred ccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCC
Confidence 987 79999999999999999999999998888887754
No 167
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.46 E-value=9.1e-13 Score=96.56 Aligned_cols=89 Identities=13% Similarity=0.149 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC------hhHHH
Q 021175 221 LAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN------KVARP 294 (316)
Q Consensus 221 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~a~~ 294 (316)
++..++++|.++...|++++|++.|+++++++|+++.+++++|.++..+|++++|+..++++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 355667777777777777777777777777777777777777777777777777777777777777776 66677
Q ss_pred HHHHHHhhCCCCCCC
Q 021175 295 RRDALKDRVPLYKGV 309 (316)
Q Consensus 295 ~l~~l~~~~~~~~~A 309 (316)
.++.++..+|+++.+
T Consensus 83 ~~~~~~~~~~~~~~a 97 (111)
T 2l6j_A 83 RLELAQGAVGSVQIP 97 (111)
T ss_dssp HHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhHhhh
Confidence 777777777666555
No 168
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.43 E-value=5.8e-13 Score=98.88 Aligned_cols=83 Identities=24% Similarity=0.393 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 202 AATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEE 281 (316)
Q Consensus 202 ~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 281 (316)
+|++.|+++++ .+|+++.+++++|.++...|++++|++.|+++++.+|++..+++++|.+|...|++++|+..|++
T Consensus 3 ~a~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 78 (115)
T 2kat_A 3 AITERLEAMLA----QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWES 78 (115)
T ss_dssp CHHHHHHHHHT----TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHH----hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45666666666 46666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHhcCCC
Q 021175 282 VLLFDPN 288 (316)
Q Consensus 282 al~~~p~ 288 (316)
+++++|+
T Consensus 79 al~~~~~ 85 (115)
T 2kat_A 79 GLAAAQS 85 (115)
T ss_dssp HHHHHHH
T ss_pred HHHhccc
Confidence 6666653
No 169
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.43 E-value=1.8e-11 Score=107.74 Aligned_cols=177 Identities=9% Similarity=-0.024 Sum_probs=142.6
Q ss_pred hHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC
Q 021175 120 NVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKF 199 (316)
Q Consensus 120 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 199 (316)
.+.+..++..+..++|........-...+..++... ........+++++..+.+++..+|.+..+|...+.++...++
T Consensus 46 s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~--~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~ 123 (331)
T 3dss_A 46 DESVLELTSQILGANPDFATLWNCRREVLQHLETEK--SPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE 123 (331)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHS--CHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccc--cchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCc
Confidence 445677888777777776644333322222211100 000112347899999999999999999999999999999984
Q ss_pred --hHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc-------
Q 021175 200 --YPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGK-LDKGISQFETAVKLQPGYVTAWNNLGDAYEKK------- 269 (316)
Q Consensus 200 --~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~-~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~------- 269 (316)
++++++++.++++ .+|.+..+|...+.+....|+ +++++++++++++.+|++..+|.+++.++...
T Consensus 124 ~~~~~EL~~~~k~l~----~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~ 199 (331)
T 3dss_A 124 PNWARELELCARFLE----ADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSG 199 (331)
T ss_dssp CCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSCCC---
T ss_pred ccHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhhccccc
Confidence 8999999999999 699999999999999999999 69999999999999999999999999999887
Q ss_pred -------CCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 270 -------KDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 270 -------g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
+.++++++++.+++..+|++..+|..+..+...
T Consensus 200 ~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~ll~~ 239 (331)
T 3dss_A 200 PQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGA 239 (331)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHS
T ss_pred cccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 568999999999999999999999755444433
No 170
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.43 E-value=1.9e-12 Score=91.29 Aligned_cols=85 Identities=32% Similarity=0.606 Sum_probs=64.1
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDA 298 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~ 298 (316)
|.++.+++.+|.++...|++++|++.++++++.+|++..+++++|.++...|++++|+.+++++++++|++..++.+++.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45667777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHhhC
Q 021175 299 LKDRV 303 (316)
Q Consensus 299 l~~~~ 303 (316)
++...
T Consensus 86 ~~~~~ 90 (91)
T 1na3_A 86 AKQKQ 90 (91)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 76554
No 171
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.43 E-value=7.3e-14 Score=119.85 Aligned_cols=183 Identities=10% Similarity=-0.072 Sum_probs=144.6
Q ss_pred ccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCH------------
Q 021175 117 ASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA------------ 184 (316)
Q Consensus 117 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~------------ 184 (316)
-++...|.+.|..+...+|...-.+......--.-+.... ..++..+++..+++.+++.|...
T Consensus 19 ~~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~-----~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~ 93 (282)
T 4f3v_A 19 PMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLF-----RAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGD 93 (282)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHH-----HHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCC
T ss_pred CCCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHH-----HHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccc
Confidence 4677778889998888888877444322100000022232 56667888899999999777643
Q ss_pred ---------HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 021175 185 ---------TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 185 ---------~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 255 (316)
+....++.++...|+|++|.+.|+..+. ..|++. .++.+|.++++.|++++|+..|+++.+..+..
T Consensus 94 ~~~~v~~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~----~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~ 168 (282)
T 4f3v_A 94 ITYPVTSPLAITMGFAACEAAQGNYADAMEALEAAPV----AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKF 168 (282)
T ss_dssp CEEECSSHHHHHHHHHHHHHHHTCHHHHHHHHTSSCC----TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHH
T ss_pred cccccCCHhHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcc
Confidence 3455588999999999999999999988 689888 99999999999999999999999887753222
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CC-ChhHHHHHHHHHhhCCCCCCC
Q 021175 256 --VTAWNNLGDAYEKKKDLKSALKAFEEVLLFD--PN-NKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 256 --~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~a~~~l~~l~~~~~~~~~A 309 (316)
..+++++|.++..+|++++|+.+|++++.-. |. ..+++..++.+..++|+.++|
T Consensus 169 ~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA 227 (282)
T 4f3v_A 169 LAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAA 227 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHH
T ss_pred cHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHH
Confidence 4689999999999999999999999998654 55 567999999999999998765
No 172
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.43 E-value=2.7e-12 Score=121.77 Aligned_cols=143 Identities=8% Similarity=-0.013 Sum_probs=133.7
Q ss_pred Hhhh-HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC----------hHHHHHHHHHHHHhcCCCCccHHHHHHHHHH
Q 021175 162 VRRE-LDLSAKELQEQVRSGDASATEYFELGAVMLRRKF----------YPAATKYLLQAIEKWDGDDQDLAQVYNALGV 230 (316)
Q Consensus 162 ~~~~-~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~ 230 (316)
..++ .++|++.+.+++..+|++..+|+..+.++...|+ ++++++.++++++ .+|++..+|++.+.
T Consensus 40 ~~~~~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~----~~pK~y~aW~hR~w 115 (567)
T 1dce_A 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR----VNPKSYGTWHHRCW 115 (567)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH----hCCCCHHHHHHHHH
Confidence 3444 4688999999999999999999999999999988 9999999999999 69999999999999
Q ss_pred HHHHcC--CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCC
Q 021175 231 SYVREG--KLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKK-DLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 231 ~~~~~g--~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~ 307 (316)
++...| +++++++.++++++.+|.+..+|...+.+....| .+++++++++++++.+|++..+|...+.+...++...
T Consensus 116 ~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l~~~~ 195 (567)
T 1dce_A 116 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQP 195 (567)
T ss_dssp HHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhhcccc
Confidence 999999 7799999999999999999999999999999999 9999999999999999999999999999998876554
Q ss_pred C
Q 021175 308 G 308 (316)
Q Consensus 308 ~ 308 (316)
+
T Consensus 196 ~ 196 (567)
T 1dce_A 196 D 196 (567)
T ss_dssp C
T ss_pred c
Confidence 3
No 173
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.2e-14 Score=102.92 Aligned_cols=95 Identities=13% Similarity=0.153 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------H
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY------V 256 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~ 256 (316)
.+.++..+|.++...|++++|++.|+++++ .+|+++.+++++|.++...|++++|++.++++++++|++ .
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 78 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLIT----AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRS 78 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHH
Confidence 467899999999999999999999999999 699999999999999999999999999999999999998 8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 257 TAWNNLGDAYEKKKDLKSALKAFEE 281 (316)
Q Consensus 257 ~~~~~lg~~~~~~g~~~~A~~~~~~ 281 (316)
.+++.+|.++...|++++|+..+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 79 KLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999988887766554
No 174
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.42 E-value=3.1e-12 Score=114.52 Aligned_cols=148 Identities=9% Similarity=-0.125 Sum_probs=100.9
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCH-----HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCc--cHHHHHHHHHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASA-----TEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQ--DLAQVYNALGVSYVR 234 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p--~~~~~~~~lg~~~~~ 234 (316)
..|++++|+..+++++...|... .++..+|.++...|++++|.+.++++++..+.... ....++.++|.++..
T Consensus 26 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 105 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA 105 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 67777778877777777666432 25677777777778888888888777775432111 223456677777777
Q ss_pred cCCHHHHHHHHHHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-----hhHHHHHHHHHh
Q 021175 235 EGKLDKGISQFETAVKLQ--------PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN-----KVARPRRDALKD 301 (316)
Q Consensus 235 ~g~~~~A~~~~~~al~~~--------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-----~~a~~~l~~l~~ 301 (316)
.|++++|++.+++++++. |....++.++|.++...|++++|..++++++++.|.. ..++..++.++.
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHH
Confidence 888888888877777754 3345566777777777788888888887777776643 234666777777
Q ss_pred hCCCCCCC
Q 021175 302 RVPLYKGV 309 (316)
Q Consensus 302 ~~~~~~~A 309 (316)
..|++++|
T Consensus 186 ~~g~~~~A 193 (373)
T 1hz4_A 186 ARGDLDNA 193 (373)
T ss_dssp HHTCHHHH
T ss_pred HcCCHHHH
Confidence 77776543
No 175
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.41 E-value=7.6e-12 Score=109.31 Aligned_cols=140 Identities=11% Similarity=-0.016 Sum_probs=132.2
Q ss_pred HhhhH-HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHH----HH
Q 021175 162 VRREL-DLSAKELQEQVRSGDASATEYFELGAVMLRRK--FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSY----VR 234 (316)
Q Consensus 162 ~~~~~-~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~----~~ 234 (316)
..+.+ ++|+..+.+++.++|++..+|+..+.++...| +++++++++++++. .+|.+..+|+..+.++ ..
T Consensus 44 ~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~----~nPk~y~aW~~R~~iL~~~~~~ 119 (306)
T 3dra_A 44 KAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIAL----DNEKNYQIWNYRQLIIGQIMEL 119 (306)
T ss_dssp HTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH----HCTTCCHHHHHHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH----HCcccHHHHHHHHHHHHHHHHh
Confidence 45555 68999999999999999999999999999999 99999999999999 6999999999999999 77
Q ss_pred c---CCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 235 E---GKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLK--SALKAFEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 235 ~---g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
. ++++++++.++++++.+|.+..+|+..+.+....|+++ +++++++++++.+|.|-.+|...+.+...++.
T Consensus 120 l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~ 195 (306)
T 3dra_A 120 NNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKH 195 (306)
T ss_dssp TTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGG
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 7 89999999999999999999999999999999999998 99999999999999999999999999888765
No 176
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.41 E-value=8.8e-12 Score=96.07 Aligned_cols=123 Identities=20% Similarity=0.136 Sum_probs=108.0
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH----cCC
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR----EGK 237 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~----~g~ 237 (316)
..+++++|++.|+++.+.++..+. +|.+|...+..++|+++|+++.+ . .++.+++++|.+|.. .++
T Consensus 7 ~~~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~----~--g~~~a~~~Lg~~y~~G~g~~~d 76 (138)
T 1klx_A 7 VKKDLKKAIQYYVKACELNEMFGC----LSLVSNSQINKQKLFQYLSKACE----L--NSGNGCRFLGDFYENGKYVKKD 76 (138)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTHH----HHHHTCTTSCHHHHHHHHHHHHH----T--TCHHHHHHHHHHHHHCSSSCCC
T ss_pred CccCHHHHHHHHHHHHcCCCHhhh----HHHHHHcCCCHHHHHHHHHHHHc----C--CCHHHHHHHHHHHHcCCCCCcc
Confidence 357899999999999998755544 99999999999999999999998 2 678999999999999 899
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCChhHHHHHHH
Q 021175 238 LDKGISQFETAVKLQPGYVTAWNNLGDAYEK----KKDLKSALKAFEEVLLFDPNNKVARPRRDA 298 (316)
Q Consensus 238 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~l~~ 298 (316)
+++|+++|+++.+. .++.+.+++|.+|.. .+++++|+.+|+++.+. +++.+..+++.
T Consensus 77 ~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~~ 137 (138)
T 1klx_A 77 LRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL--GSEDACGILNN 137 (138)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHC--
T ss_pred HHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHhh
Confidence 99999999999986 789999999999999 99999999999999987 45666666543
No 177
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.40 E-value=2.6e-11 Score=108.45 Aligned_cols=188 Identities=12% Similarity=-0.027 Sum_probs=136.6
Q ss_pred hccchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcC--------CCCHHHH
Q 021175 116 NASENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSG--------DASATEY 187 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~--------p~~~~~~ 187 (316)
..++.+.+...++.+....+....... ...++..++..+. ..|++++|+..++++++.. |....++
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~la~~~~-----~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 138 (373)
T 1hz4_A 65 CKGELTRSLALMQQTEQMARQHDVWHY-ALWSLIQQSEILF-----AQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLV 138 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHhcCcHHH-HHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHH
Confidence 345666777777655554444332221 1233444455554 8999999999999998864 3346678
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhcCCCC-ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC--c-HHHH----
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIEKWDGDD-QDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG--Y-VTAW---- 259 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~--~-~~~~---- 259 (316)
.++|.++...|++++|..+++++++..+... +....++.++|.++...|++++|.+.+++++++.+. . ....
T Consensus 139 ~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~ 218 (373)
T 1hz4_A 139 RIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNGKYHSDWISNAN 218 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccCcchhHHHHHH
Confidence 8999999999999999999999999755422 235678899999999999999999999999987432 2 1111
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh----hHHHHHHHHHhhCCCCCCC
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFDPNNK----VARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~----~a~~~l~~l~~~~~~~~~A 309 (316)
...+.++...|++++|...++++++..|... ..+..++.++...|++++|
T Consensus 219 ~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 272 (373)
T 1hz4_A 219 KVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPA 272 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHcCCHHHH
Confidence 1344568899999999999999998877542 2456788888888887654
No 178
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.40 E-value=1.6e-11 Score=114.39 Aligned_cols=134 Identities=19% Similarity=0.146 Sum_probs=111.9
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcC-
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLRR-----KFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREG- 236 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-----g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g- 236 (316)
.+++++|+..|+++.+. .++.+++.+|.++... +++++|+.+|+++++ . .++.+++++|.+|...|
T Consensus 272 ~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~----~--~~~~a~~~lg~~y~~~g~ 343 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQ--GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAE----Q--GDATAQANLGAIYFRLGS 343 (490)
T ss_dssp SCCHHHHHHHHHHHHTT--TCHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHH----T--TCHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHh----c--CCHHHHHHHHHHHHhCCC
Confidence 67888999999988765 5678889999998887 899999999999888 2 34578889999998866
Q ss_pred --CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh----CCCC
Q 021175 237 --KLDKGISQFETAVKLQPGYVTAWNNLGDAYEK----KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR----VPLY 306 (316)
Q Consensus 237 --~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~----~~~~ 306 (316)
++++|+++|+++++. +++.+++++|.+|.. .+++++|+.+|+++.+. +++.++.+++.++.. .+++
T Consensus 344 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~ 419 (490)
T 2xm6_A 344 EEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDY 419 (490)
T ss_dssp HHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred cccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 889999999999886 678899999999998 89999999999999875 468899999999887 5554
Q ss_pred CC
Q 021175 307 KG 308 (316)
Q Consensus 307 ~~ 308 (316)
++
T Consensus 420 ~~ 421 (490)
T 2xm6_A 420 VQ 421 (490)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 179
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.40 E-value=1.5e-12 Score=95.01 Aligned_cols=90 Identities=12% Similarity=0.008 Sum_probs=87.3
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCcc--HHHHHHHHHHHHHHc-CCH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQD--LAQVYNALGVSYVRE-GKL 238 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~--~~~~~~~lg~~~~~~-g~~ 238 (316)
..|++++|+..++++++.+|++..++.++|.++...|++++|+++++++++ ..|. +..++.++|.++... |++
T Consensus 18 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~~~l~~~~~~~~~~~ 93 (112)
T 2kck_A 18 DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVIN----VIEDEYNKDVWAAKADALRYIEGKE 93 (112)
T ss_dssp SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----TSCCTTCHHHHHHHHHHHTTCSSCS
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCcccchHHHHHHHHHHHHHHhCCH
Confidence 899999999999999999999999999999999999999999999999999 6888 999999999999999 999
Q ss_pred HHHHHHHHHHHHhCCCc
Q 021175 239 DKGISQFETAVKLQPGY 255 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~ 255 (316)
++|+++++++++..|++
T Consensus 94 ~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 94 VEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHhhcccCC
Confidence 99999999999999875
No 180
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=99.40 E-value=2.6e-11 Score=112.97 Aligned_cols=128 Identities=12% Similarity=0.117 Sum_probs=70.5
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH----
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLR----RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR---- 234 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~---- 234 (316)
.+++++|++.|+++.+. .++.+++++|.+|.. .+++++|+++|+++.+ ++++.+++++|.+|..
T Consensus 92 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~------~~~~~a~~~Lg~~y~~g~g~ 163 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE------QGRDSGQQSMGDAYFEGDGV 163 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH------TTCHHHHHHHHHHHHHTSSS
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH------CCCHHHHHHHHHHHHcCCCC
Confidence 45566666666665543 345555666666555 5566666666666554 1344555555555555
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 235 EGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEK----KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 235 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
.+++++|+++|+++++. +++.+++++|.+|.. .+++++|+.+|+++.+. +++.+...++.++..
T Consensus 164 ~~d~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~ 231 (490)
T 2xm6_A 164 TRDYVMAREWYSKAAEQ--GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATS--GDELGQLHLADMYYF 231 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 55555555555555553 345555555555555 55555555555555543 344555555555543
No 181
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.39 E-value=2.6e-12 Score=90.57 Aligned_cols=85 Identities=31% Similarity=0.543 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 021175 182 ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNN 261 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 261 (316)
..+.+++.+|.++...|++++|+++++++++ .+|+++.++.++|.++...|++++|++.++++++++|++..++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~ 82 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQN 82 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHh----cCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4578899999999999999999999999999 589999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC
Q 021175 262 LGDAYEKKK 270 (316)
Q Consensus 262 lg~~~~~~g 270 (316)
+|.++...|
T Consensus 83 l~~~~~~~g 91 (91)
T 1na3_A 83 LGNAKQKQG 91 (91)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhcC
Confidence 999998765
No 182
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.38 E-value=3.6e-12 Score=94.51 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 168 LSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFET 247 (316)
Q Consensus 168 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 247 (316)
++++.|+++++.+|+++.+++++|.++...|++++|+.+|+++++ .+|++..+++++|.++...|++++|++.|++
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 78 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALD----FDPTYSVAWKWLGKTLQGQGDRAGARQAWES 78 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHH----HCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999 6899999999999999999999999999999
Q ss_pred HHHhCCC--cHHHHHHHHHHHHHc
Q 021175 248 AVKLQPG--YVTAWNNLGDAYEKK 269 (316)
Q Consensus 248 al~~~p~--~~~~~~~lg~~~~~~ 269 (316)
+++++|+ +......+...+...
T Consensus 79 al~~~~~~~~~~~~~~l~~~l~~l 102 (115)
T 2kat_A 79 GLAAAQSRGDQQVVKELQVFLRRL 102 (115)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHhccccccHHHHHHHHHHHHHh
Confidence 9999885 344444554444433
No 183
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.36 E-value=2e-12 Score=100.49 Aligned_cols=126 Identities=14% Similarity=0.121 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY------ 255 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------ 255 (316)
..++..+|.++...|++++|+++++++++..+. ..+....++.++|.++...|++++|++++++++++.+..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 567899999999999999999999999996432 112334689999999999999999999999999876543
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC------ChhHHHHHHHHHhhCCCCCCC
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN------NKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~------~~~a~~~l~~l~~~~~~~~~A 309 (316)
..++.++|.++...|++++|..++++++++.+. ...++..++.++...|++++|
T Consensus 89 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 148 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQA 148 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHH
Confidence 678999999999999999999999999987432 245678889999999988654
No 184
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.35 E-value=2.3e-11 Score=107.58 Aligned_cols=140 Identities=16% Similarity=0.054 Sum_probs=132.2
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHc-C-CHH
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLRRK-FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVRE-G-KLD 239 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~-g-~~~ 239 (316)
.+..++|++.+.+++..+|++..+|+..+.+....| +++++++.+++++. .+|++..+|+..+.++... + +++
T Consensus 67 ~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~----~nPKny~aW~hR~wlL~~l~~~~~~ 142 (349)
T 3q7a_A 67 EEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAV----QNLKSYQVWHHRLLLLDRISPQDPV 142 (349)
T ss_dssp TCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH----TTCCCHHHHHHHHHHHHHHCCSCCH
T ss_pred CCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHhcCCChH
Confidence 344578999999999999999999999999999999 59999999999999 7999999999999999998 8 999
Q ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 240 KGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLK--------SALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 240 ~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~--------~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
++++.++++++.+|.+..+|...+.+....|+++ +++++++++++.+|.|..+|...+.+...++..
T Consensus 143 ~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~~ 217 (349)
T 3q7a_A 143 SEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPGA 217 (349)
T ss_dssp HHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTTC
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999998888 999999999999999999999999999888763
No 185
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.35 E-value=3.8e-12 Score=92.31 Aligned_cols=89 Identities=17% Similarity=0.272 Sum_probs=65.0
Q ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC--hhHHHH
Q 021175 218 DQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN--KVARPR 295 (316)
Q Consensus 218 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~a~~~ 295 (316)
+|+++.+++++|.++...|++++|++.|+++++++|+++.+++++|.+|...|++++|+..|++++++.|++ ......
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 677778888888888888888888888888888888888888888888888888888888888888776643 344445
Q ss_pred HHHHHhhCCCC
Q 021175 296 RDALKDRVPLY 306 (316)
Q Consensus 296 l~~l~~~~~~~ 306 (316)
+..+....+..
T Consensus 83 l~~~l~~~~~~ 93 (100)
T 3ma5_A 83 LQDAKLKAEGL 93 (100)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHcccc
Confidence 55555554444
No 186
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.32 E-value=7.7e-11 Score=108.89 Aligned_cols=124 Identities=20% Similarity=0.155 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCHHHHHHHHHH-H--HHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcC----
Q 021175 164 RELDLSAKELQEQVRSGDASATEYFELGAV-M--LRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREG---- 236 (316)
Q Consensus 164 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~-~--~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g---- 236 (316)
+++++|+..|+++. |.++.+++++|.+ + ...+++++|+++|+++.+ ++++.+++++|.+|. .|
T Consensus 231 ~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~------~g~~~A~~~Lg~~y~-~G~g~~ 300 (452)
T 3e4b_A 231 PDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA------ADQPRAELLLGKLYY-EGKWVP 300 (452)
T ss_dssp CCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH------TTCHHHHHHHHHHHH-HCSSSC
T ss_pred CCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH------CCCHHHHHHHHHHHH-cCCCCC
Confidence 68999999999987 8899999999998 4 468999999999999987 347889999999998 55
Q ss_pred -CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 237 -KLDKGISQFETAVKLQPGYVTAWNNLGDAYEK----KKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 237 -~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
++++|+++|+++. |+++.+++++|.+|.. ..++++|..+|+++.+ ++++.+..+++.++..
T Consensus 301 ~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~--~g~~~A~~~Lg~~y~~ 366 (452)
T 3e4b_A 301 ADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAAR--NGQNSADFAIAQLFSQ 366 (452)
T ss_dssp CCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT--TTCTTHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh--hChHHHHHHHHHHHHh
Confidence 9999999999998 9999999999999887 4499999999999886 5678999999998864
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=99.31 E-value=4.6e-11 Score=110.39 Aligned_cols=137 Identities=16% Similarity=0.151 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc----CChHHHHHHHHHHHHhcCCCCcc
Q 021175 148 LLGVGTFFVIRQVLVRR---ELDLSAKELQEQVRSGDASATEYFELGAVMLRR----KFYPAATKYLLQAIEKWDGDDQD 220 (316)
Q Consensus 148 ~~~~~~~~~~~~~~~~~---~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~----g~~~~A~~~~~~al~~~~~~~p~ 220 (316)
+..+|..+. ..| ++++|++.|+++.+.+|..+..++++|.+|... +++++|+++|+++. |+
T Consensus 179 ~~~Lg~~~~-----~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-------~g 246 (452)
T 3e4b_A 179 YVELATVYQ-----KKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-------PG 246 (452)
T ss_dssp HHHHHHHHH-----HTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-------GG
T ss_pred HHHHHHHHH-----HcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-------CC
Confidence 344444454 577 999999999999999999999999999999776 79999999999984 67
Q ss_pred HHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhcCCCChhH
Q 021175 221 LAQVYNALGVS-Y--VREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKK-----DLKSALKAFEEVLLFDPNNKVA 292 (316)
Q Consensus 221 ~~~~~~~lg~~-~--~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-----~~~~A~~~~~~al~~~p~~~~a 292 (316)
++.+++++|.+ + ...+++++|+++|+++.+. +++.+++++|.+|. .| ++++|+.+|+++. |+++.+
T Consensus 247 ~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A 320 (452)
T 3e4b_A 247 YPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAA 320 (452)
T ss_dssp STHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHH
T ss_pred CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHH
Confidence 78899999999 4 4689999999999999864 58999999999998 56 9999999999998 999999
Q ss_pred HHHHHHHHhh
Q 021175 293 RPRRDALKDR 302 (316)
Q Consensus 293 ~~~l~~l~~~ 302 (316)
..+++.++..
T Consensus 321 ~~~Lg~~y~~ 330 (452)
T 3e4b_A 321 DYYLGQIYRR 330 (452)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHC
Confidence 9999998876
No 188
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.31 E-value=2.8e-12 Score=92.30 Aligned_cols=91 Identities=13% Similarity=0.221 Sum_probs=73.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQ-VYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAY 266 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~-~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 266 (316)
++.|..+...|++++|++.++++++ .+|+++. +++++|.++...|++++|++.|+++++++|++..++.+
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~----~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~----- 74 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQ----TEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR----- 74 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH----HCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-----
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH----HCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-----
Confidence 5677888888888888888888888 5788888 88888888888888888888888888888888777654
Q ss_pred HHcCCHHHHHHHHHHHHhcCCCCh
Q 021175 267 EKKKDLKSALKAFEEVLLFDPNNK 290 (316)
Q Consensus 267 ~~~g~~~~A~~~~~~al~~~p~~~ 290 (316)
+.+.+++..|+++...+|+++
T Consensus 75 ---~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 ---KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp ---HHHHHHHHHHCCTTHHHHCCS
T ss_pred ---HHHHHHHHHHHHHhccCcccc
Confidence 556778888888877777654
No 189
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.31 E-value=1.2e-11 Score=115.06 Aligned_cols=127 Identities=10% Similarity=0.067 Sum_probs=110.4
Q ss_pred HHHhhhHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhc----CCCCccHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRS-----GDAS---ATEYFELGAVMLRRKFYPAATKYLLQAIEKW----DGDDQDLAQVYNA 227 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~----~~~~p~~~~~~~~ 227 (316)
+..+|+|++|+..+++++++ .|++ ...+.++|.+|..+|+|++|+.+++++++.. ...+|+.+..+++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 34789999999999999974 3444 5689999999999999999999999999864 3368889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 021175 228 LGVSYVREGKLDKGISQFETAVKL-----QPGY---VTAWNNLGDAYEKKKDLKSALKAFEEVLLFD 286 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 286 (316)
||.+|..+|++++|+..|++|+++ .|++ .+...+++.++..+|.+++|...|+++.+..
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999975 4555 5667899999999999999999999987643
No 190
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.29 E-value=9.1e-11 Score=103.24 Aligned_cols=140 Identities=10% Similarity=0.011 Sum_probs=130.1
Q ss_pred HhhhHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCC----------hHHHHHHHHHHHHhcCCCCccHHHHHHHHHH
Q 021175 162 VRRELD-LSAKELQEQVRSGDASATEYFELGAVMLRRKF----------YPAATKYLLQAIEKWDGDDQDLAQVYNALGV 230 (316)
Q Consensus 162 ~~~~~~-~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~----------~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~ 230 (316)
..|+++ +|+..+.+++..+|++..+|+..+.+....++ +++++.++++++. .+|.+..+|+..+.
T Consensus 41 ~~~e~s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~----~~PKny~aW~hR~w 116 (331)
T 3dss_A 41 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR----VNPKSYGTWHHRCW 116 (331)
T ss_dssp HTTCCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH----hCCCCHHHHHHHHH
Confidence 556665 89999999999999999999999999988776 6899999999999 69999999999999
Q ss_pred HHHHcCC--HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC
Q 021175 231 SYVREGK--LDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKD-LKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL 305 (316)
Q Consensus 231 ~~~~~g~--~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~-~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~ 305 (316)
++...|+ ++++++.+.++++.+|.+..+|...+.+....|+ ++++++++.++++.+|+|..+|..++.+...+..
T Consensus 117 lL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l~~ 194 (331)
T 3dss_A 117 LLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHP 194 (331)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHHSC
T ss_pred HHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhhh
Confidence 9999994 9999999999999999999999999999999999 6999999999999999999999999999887754
No 191
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.25 E-value=2.7e-11 Score=87.72 Aligned_cols=86 Identities=20% Similarity=0.261 Sum_probs=72.2
Q ss_pred cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--H
Q 021175 179 SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY--V 256 (316)
Q Consensus 179 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~ 256 (316)
.+|+++.+++++|.++...|++++|+++|+++++ .+|+++.+++++|.+|...|++++|++.|++++++.|+. .
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~ 77 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVE----TDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQ 77 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCch
Confidence 4799999999999999999999999999999999 699999999999999999999999999999999987643 3
Q ss_pred HHHHHHHHHHHH
Q 021175 257 TAWNNLGDAYEK 268 (316)
Q Consensus 257 ~~~~~lg~~~~~ 268 (316)
.....+...+..
T Consensus 78 ~~~~~l~~~l~~ 89 (100)
T 3ma5_A 78 KDLSELQDAKLK 89 (100)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 444444444433
No 192
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.23 E-value=3.8e-10 Score=97.99 Aligned_cols=137 Identities=12% Similarity=0.010 Sum_probs=116.6
Q ss_pred HhhhHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCcc----HHHHHHHH--HHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGD--ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQD----LAQVYNAL--GVSYV 233 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p--~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~----~~~~~~~l--g~~~~ 233 (316)
..|++++|++.+.+.+..+| +..++....+.++..+|+.+.|.+.+++..+ .+|+ +-....++ |.+..
T Consensus 112 ~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~----~~~d~~~~~d~~l~~Laea~v~l 187 (310)
T 3mv2_B 112 ILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN----AIEDTVSGDNEMILNLAESYIKF 187 (310)
T ss_dssp HHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCccccccchHHHHHHHHHHHHH
Confidence 78999999999999999997 8899999999999999999999999999988 5773 23344445 44466
Q ss_pred HcC--CHHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc----------CCCChhHHHHHHHH
Q 021175 234 REG--KLDKGISQFETAVKLQPG--YVTAWNNLGDAYEKKKDLKSALKAFEEVLLF----------DPNNKVARPRRDAL 299 (316)
Q Consensus 234 ~~g--~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~----------~p~~~~a~~~l~~l 299 (316)
..| ++++|...|+++.+..|+ ....+++ ++..+|++++|.+.+++.++. +|+++++..++..+
T Consensus 188 ~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l 264 (310)
T 3mv2_B 188 ATNKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITL 264 (310)
T ss_dssp HHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHH
T ss_pred HhCCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHH
Confidence 667 999999999999998887 3445555 899999999999999988876 58899999999888
Q ss_pred HhhCCC
Q 021175 300 KDRVPL 305 (316)
Q Consensus 300 ~~~~~~ 305 (316)
...+|+
T Consensus 265 ~~~lgk 270 (310)
T 3mv2_B 265 ALMQGL 270 (310)
T ss_dssp HHHTTC
T ss_pred HHHhCh
Confidence 888886
No 193
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.17 E-value=6.4e-11 Score=107.90 Aligned_cols=151 Identities=11% Similarity=0.082 Sum_probs=90.8
Q ss_pred HHHHHhhhHHHHHHHHHHHHHcCCCC-----------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCc-
Q 021175 158 RQVLVRRELDLSAKELQEQVRSGDAS-----------------ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQ- 219 (316)
Q Consensus 158 ~~~~~~~~~~~A~~~~~~al~~~p~~-----------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p- 219 (316)
+.....|++++|++.|.++++..|+. ..++.++|.+|...|++++|.+++++++...+....
T Consensus 12 ~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~ 91 (434)
T 4b4t_Q 12 RRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKS 91 (434)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccch
Confidence 33447888888888888888877753 236788888888888888888888888775432211
Q ss_pred -cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------C
Q 021175 220 -DLAQVYNALGVSYVREGKLDKGISQFETAVKLQP------GYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF------D 286 (316)
Q Consensus 220 -~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~ 286 (316)
....+...+|.++...|++++|++.+++++...+ ....++.++|.+|...|++++|...+++++.. .
T Consensus 92 ~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~ 171 (434)
T 4b4t_Q 92 KTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK 171 (434)
T ss_dssp HHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc
Confidence 1123344455555555666666666655554321 12445555666666666666666665555543 1
Q ss_pred CCChhHHHHHHHHHhhCCCCCC
Q 021175 287 PNNKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 287 p~~~~a~~~l~~l~~~~~~~~~ 308 (316)
|...+.+..++.++...|++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~ 193 (434)
T 4b4t_Q 172 PSLVDVHLLESKVYHKLRNLAK 193 (434)
T ss_dssp THHHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHHhCcHHH
Confidence 2223445555555555555543
No 194
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.17 E-value=5.6e-11 Score=110.47 Aligned_cols=121 Identities=8% Similarity=0.015 Sum_probs=98.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCc---H
Q 021175 189 ELGAVMLRRKFYPAATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ-----PGY---V 256 (316)
Q Consensus 189 ~lg~~~~~~g~~~~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~---~ 256 (316)
..+..+..+|+|++|+..++++++...+ .+|+....+.+||.+|..+|+|++|+.++++++++. |++ .
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 3444567899999999999999997543 577888999999999999999999999999999762 444 6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChhHH---HHHHHHHhhCCCCCCC
Q 021175 257 TAWNNLGDAYEKKKDLKSALKAFEEVLLF-----DPNNKVAR---PRRDALKDRVPLYKGV 309 (316)
Q Consensus 257 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~a~---~~l~~l~~~~~~~~~A 309 (316)
..+++||.+|..+|++++|...|++++++ .|+++... .+++..+..++.+++|
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~a 454 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQN 454 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999976 56665544 4566666555555433
No 195
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.15 E-value=3.5e-10 Score=81.11 Aligned_cols=78 Identities=15% Similarity=0.282 Sum_probs=70.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHH--HHHHHHHh
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVKLQPGYVT-AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVAR--PRRDALKD 301 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~--~~l~~l~~ 301 (316)
.++.|.++...|++++|++.|+++++.+|+++. +++++|.+|..+|++++|+.+|+++++++|++..++ ..++.+..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~ 82 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILN 82 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999 999999999999999999999999999999999988 55555444
Q ss_pred h
Q 021175 302 R 302 (316)
Q Consensus 302 ~ 302 (316)
.
T Consensus 83 ~ 83 (99)
T 2kc7_A 83 F 83 (99)
T ss_dssp H
T ss_pred H
Confidence 3
No 196
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=99.09 E-value=1.5e-09 Score=98.74 Aligned_cols=189 Identities=10% Similarity=-0.049 Sum_probs=138.5
Q ss_pred hccchHHHHHHHHHHhhhhhhhh----------HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCH-
Q 021175 116 NASENVQMDAVYEIGELFELGIQ----------LSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASA- 184 (316)
Q Consensus 116 ~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~- 184 (316)
..++...|.+.|..+....+... ........++..+|..+. ..|++++|++.++++++..+...
T Consensus 16 ~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~-----~~~~~~~a~~~~~~~~~~~~~~~~ 90 (434)
T 4b4t_Q 16 NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYV-----TMGAKDKLREFIPHSTEYMMQFAK 90 (434)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHH-----HHTCHHHHHHHHHHTHHHHHTSCH
T ss_pred HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHHHHHccc
Confidence 45566667777764443332211 011111124455555655 89999999999999988665432
Q ss_pred -----HHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------
Q 021175 185 -----TEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL------ 251 (316)
Q Consensus 185 -----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------ 251 (316)
.+...+|.++...|++++|++++++++..... ..+....++.++|.+|...|+|++|.+.+++++..
T Consensus 91 ~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~ 170 (434)
T 4b4t_Q 91 SKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDD 170 (434)
T ss_dssp HHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSC
T ss_pred hHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhccc
Confidence 35667888888899999999999999986432 34567889999999999999999999999999875
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh-------hHHHHHHHHHhhCCCCCCC
Q 021175 252 QPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNK-------VARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 252 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-------~a~~~l~~l~~~~~~~~~A 309 (316)
.|....++..+|.+|...|++++|...+++++...+... ..+..++.++...+++++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A 235 (434)
T 4b4t_Q 171 KPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYKTA 235 (434)
T ss_dssp STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSCHHHH
T ss_pred chhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHhHHHH
Confidence 234478999999999999999999999999998754332 3345566666666666543
No 197
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.08 E-value=1.6e-09 Score=77.31 Aligned_cols=76 Identities=16% Similarity=0.039 Sum_probs=64.1
Q ss_pred CccHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHH
Q 021175 218 DQDLAQVYNALGVSYVREGK---LDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVAR 293 (316)
Q Consensus 218 ~p~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 293 (316)
+|+++..+..+|.+++..++ .++|...++++++++|+++.+.+.+|..++..|++++|+.+|+++++.+|.++...
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~ 80 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRV 80 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Confidence 57788888888888876665 68899999999999999999999999999999999999999999998888854443
No 198
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=99.07 E-value=4.8e-09 Score=92.79 Aligned_cols=127 Identities=21% Similarity=0.234 Sum_probs=102.4
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc---C-ChHHHHHHHHHHHHhc--CCCCccHHHHHHHHHHHHHHcC
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLRR---K-FYPAATKYLLQAIEKW--DGDDQDLAQVYNALGVSYVREG 236 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~---g-~~~~A~~~~~~al~~~--~~~~p~~~~~~~~lg~~~~~~g 236 (316)
..+..+|+..|+++++.+|+.+.++..++.++... + .......-+.++++.. -...|.++.++..+|..+...|
T Consensus 212 ~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~g 291 (372)
T 3ly7_A 212 DKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKG 291 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCC
Confidence 55678999999999999999999999998888632 1 1111222222222211 0146888999999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Q 021175 237 KLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNK 290 (316)
Q Consensus 237 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 290 (316)
++++|++.+++|++++|+ ..++..+|.++...|++++|++.|++|++++|..+
T Consensus 292 d~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 292 KTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp CHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred CHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 999999999999999975 77889999999999999999999999999999875
No 199
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.05 E-value=2.3e-09 Score=98.10 Aligned_cols=103 Identities=10% Similarity=0.056 Sum_probs=84.7
Q ss_pred HcCChHHHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC---cHHHHHHHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL-----QPG---YVTAWNNLG 263 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~---~~~~~~~lg 263 (316)
..|+|++|++.++++++...+ .+|.....+.++|.+|..+|+|++|+.++++++++ .|+ .+..+++||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 458899999999999986433 56777888999999999999999999999999975 244 466789999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhc-----CCCChhHHHHHHH
Q 021175 264 DAYEKKKDLKSALKAFEEVLLF-----DPNNKVARPRRDA 298 (316)
Q Consensus 264 ~~~~~~g~~~~A~~~~~~al~~-----~p~~~~a~~~l~~ 298 (316)
.+|..+|++++|+..|++++++ .|+++........
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~ 429 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQE 429 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 9999999999999999999976 5777766554443
No 200
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=99.05 E-value=1.6e-08 Score=87.81 Aligned_cols=128 Identities=5% Similarity=-0.036 Sum_probs=105.2
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCC----CHHHHHHHHH--HHHHcC--ChHHHHHHHHHHHHhcCCCCcc--HHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDA----SATEYFELGA--VMLRRK--FYPAATKYLLQAIEKWDGDDQD--LAQVYNALG 229 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~----~~~~~~~lg~--~~~~~g--~~~~A~~~~~~al~~~~~~~p~--~~~~~~~lg 229 (316)
++..|+.+.|.+.+++..+.+|+ +.....+++. +....| ++++|...|+++.+ ..|+ ....+++
T Consensus 146 ~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~----~~p~~~~~~lLln-- 219 (310)
T 3mv2_B 146 ALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQ----TFPTWKTQLGLLN-- 219 (310)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHT----TSCSHHHHHHHHH--
T ss_pred HHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHH----hCCCcccHHHHHH--
Confidence 34899999999999999999883 2334455544 455556 99999999999988 4665 3445555
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh----------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHH
Q 021175 230 VSYVREGKLDKGISQFETAVKL----------QPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRR 296 (316)
Q Consensus 230 ~~~~~~g~~~~A~~~~~~al~~----------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 296 (316)
++..+|++++|.+.+++.++. +|+++.++.|+..+...+|+ +|.++++++.+.+|+++......
T Consensus 220 -~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp~i~d~~ 293 (310)
T 3mv2_B 220 -LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHAFIKHHQ 293 (310)
T ss_dssp -HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCHHHHHHH
T ss_pred -HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCChHHHHHH
Confidence 899999999999999988876 58999999999999999998 89999999999999998776543
No 201
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.02 E-value=2.6e-09 Score=82.44 Aligned_cols=94 Identities=18% Similarity=0.172 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcC---ChHHHHHHHHHHHHhcCCCC-c-cHHHHHHHHHHHHHHcCCH
Q 021175 164 RELDLSAKELQEQVRSGDASATEYFELGAVMLRRK---FYPAATKYLLQAIEKWDGDD-Q-DLAQVYNALGVSYVREGKL 238 (316)
Q Consensus 164 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~~~~~-p-~~~~~~~~lg~~~~~~g~~ 238 (316)
.....+.+.|.+.++.+|.+.++.+++|.++.+.+ +.++++..+++.++. + | +..+++|++|..+++.|+|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~----~~p~~~rd~lY~LAv~~~kl~~Y 87 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPK----GSKEEQRDYVFYLAVGNYRLKEY 87 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc----CCccchHHHHHHHHHHHHHccCH
Confidence 34455555666665555556666666666666655 444566666665552 3 4 3455555555555555555
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHH
Q 021175 239 DKGISQFETAVKLQPGYVTAWNN 261 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~ 261 (316)
++|.++++++++++|++.++...
T Consensus 88 ~~A~~y~~~lL~ieP~n~QA~~L 110 (152)
T 1pc2_A 88 EKALKYVRGLLQTEPQNNQAKEL 110 (152)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHH
Confidence 55555555555555555554443
No 202
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=1.2e-08 Score=78.73 Aligned_cols=100 Identities=16% Similarity=0.092 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCCHHH
Q 021175 200 YPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREG---KLDKGISQFETAVKLQ-P-GYVTAWNNLGDAYEKKKDLKS 274 (316)
Q Consensus 200 ~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g---~~~~A~~~~~~al~~~-p-~~~~~~~~lg~~~~~~g~~~~ 274 (316)
...+.+.|.+.++ .++.+.++.+++|.++.+.+ +.++++..+++.++.+ | +..+++|++|..|+++|+|++
T Consensus 14 l~~~~~~y~~e~~----~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 14 LLKFEKKFQSEKA----AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHH----TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHc----cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 4567788888888 57889999999999999988 7779999999999999 7 679999999999999999999
Q ss_pred HHHHHHHHHhcCCCChhHHHHHHHHHhhC
Q 021175 275 ALKAFEEVLLFDPNNKVARPRRDALKDRV 303 (316)
Q Consensus 275 A~~~~~~al~~~p~~~~a~~~l~~l~~~~ 303 (316)
|+++++++++++|++.++......+..+.
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999998877776554
No 203
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.97 E-value=1e-08 Score=74.66 Aligned_cols=81 Identities=27% Similarity=0.362 Sum_probs=62.1
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC---CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG---DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAW 259 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 259 (316)
.+..++.+|..++..|+|+.|+.+|++|++..+. ..+..+.++.++|.+++++|++++|+..++++++++|++..+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 3456778888888888888888888888876432 1245677788888888888888888888888888888887777
Q ss_pred HHHH
Q 021175 260 NNLG 263 (316)
Q Consensus 260 ~~lg 263 (316)
.+++
T Consensus 84 ~n~~ 87 (104)
T 2v5f_A 84 GNLK 87 (104)
T ss_dssp HHHH
T ss_pred hhHH
Confidence 7776
No 204
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.96 E-value=8.3e-09 Score=75.11 Aligned_cols=81 Identities=21% Similarity=0.143 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHH
Q 021175 222 AQVYNALGVSYVREGKLDKGISQFETAVKLQ-------PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARP 294 (316)
Q Consensus 222 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~ 294 (316)
+.-.+.+|..++..|+|++|+.+|++|++.. +....++.++|.++.++|++++|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4567889999999999999999999999863 345889999999999999999999999999999999999988
Q ss_pred HHHHHHhh
Q 021175 295 RRDALKDR 302 (316)
Q Consensus 295 ~l~~l~~~ 302 (316)
+++.+...
T Consensus 85 n~~~~~~~ 92 (104)
T 2v5f_A 85 NLKYFEYI 92 (104)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 88765554
No 205
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.95 E-value=1.2e-08 Score=93.34 Aligned_cols=104 Identities=7% Similarity=-0.043 Sum_probs=83.6
Q ss_pred HHHHHcCChHHHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCc---HHHH
Q 021175 192 AVMLRRKFYPAATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ-----PGY---VTAW 259 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~---~~~~ 259 (316)
.-+..+|+|++|++.++++++...+ .+|.....+.++|.+|..+|+|++|++++++++++. |++ ...+
T Consensus 295 e~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l 374 (429)
T 3qwp_A 295 EELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQV 374 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHH
T ss_pred HHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHH
Confidence 3455788999999999999975432 466778889999999999999999999999999752 444 5678
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChhHHHH
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLF-----DPNNKVARPR 295 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~~a~~~ 295 (316)
++||.+|..+|++++|+..|++++++ .|+++.....
T Consensus 375 ~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~ 415 (429)
T 3qwp_A 375 MKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDL 415 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHH
Confidence 89999999999999999999999976 5666655543
No 206
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.94 E-value=4e-08 Score=99.43 Aligned_cols=129 Identities=13% Similarity=0.132 Sum_probs=103.3
Q ss_pred HhhhHHHHHHHHHHHHHcCCC---------------------------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhc
Q 021175 162 VRRELDLSAKELQEQVRSGDA---------------------------SATEYFELGAVMLRRKFYPAATKYLLQAIEKW 214 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~---------------------------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 214 (316)
..|+++++++.|..+.+..++ +...+..+|..+...|+|++|..+|.++-
T Consensus 1146 ~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~--- 1222 (1630)
T 1xi4_A 1146 TSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVS--- 1222 (1630)
T ss_pred HcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhh---
Confidence 778888888888776654432 23456678888889999999998888862
Q ss_pred CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-------------------------CcHHHHHHHHHHHHHc
Q 021175 215 DGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQP-------------------------GYVTAWNNLGDAYEKK 269 (316)
Q Consensus 215 ~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-------------------------~~~~~~~~lg~~~~~~ 269 (316)
.|..+|.++.+.|++++|++.+++|...++ .+++.+..++..|...
T Consensus 1223 ---------ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~ 1293 (1630)
T 1xi4_A 1223 ---------NFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDR 1293 (1630)
T ss_pred ---------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHc
Confidence 588899999999999999999999855443 1344566788889999
Q ss_pred CCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 270 KDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 270 g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
|.+++|+..+++++.++|.+...+..++.++.+
T Consensus 1294 G~feEAI~LlE~aL~LeraH~gmftELaiLyaK 1326 (1630)
T 1xi4_A 1294 GYFEELITMLEAALGLERAHMGMFTELAILYSK 1326 (1630)
T ss_pred CCHHHHHHHHHHHhccChhHhHHHHHHHHHHHh
Confidence 999999999999999999998888888777654
No 207
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.92 E-value=9.6e-08 Score=81.30 Aligned_cols=107 Identities=18% Similarity=0.154 Sum_probs=91.3
Q ss_pred cCCCCHHHHHHHHHHHHH-----cCC------hHHHHHHHHHHHHhcCCCCcc--HHHHHHHHHHHHHHc-----CCHHH
Q 021175 179 SGDASATEYFELGAVMLR-----RKF------YPAATKYLLQAIEKWDGDDQD--LAQVYNALGVSYVRE-----GKLDK 240 (316)
Q Consensus 179 ~~p~~~~~~~~lg~~~~~-----~g~------~~~A~~~~~~al~~~~~~~p~--~~~~~~~lg~~~~~~-----g~~~~ 240 (316)
.+|++++.++=.|..... .|+ ..+|...++++++ ++|+ +..+|..+|..|... |+.++
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAle----LDP~~~~GsA~~~LG~lY~~vPp~~gGd~ek 222 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACD----LWPSYQEGAVWNVLTKFYAAAPESFGGGMEK 222 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHH----HCTTHHHHHHHHHHHHHHHHSCTTTTCCHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHH----hCCCcccCHHHHHHHHHHHhCCCccCCCHHH
Confidence 466777776666655432 233 4789999999999 6998 677999999999995 99999
Q ss_pred HHHHHHHHHHhCCCc-HHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcCCCC
Q 021175 241 GISQFETAVKLQPGY-VTAWNNLGDAYEK-KKDLKSALKAFEEVLLFDPNN 289 (316)
Q Consensus 241 A~~~~~~al~~~p~~-~~~~~~lg~~~~~-~g~~~~A~~~~~~al~~~p~~ 289 (316)
|.++|++|++++|+. ..+++.+|..+.. +|++++|.++++++++.+|..
T Consensus 223 A~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 223 AHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 999999999999975 9999999999988 599999999999999998874
No 208
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.92 E-value=4.2e-09 Score=96.38 Aligned_cols=109 Identities=10% Similarity=0.035 Sum_probs=91.4
Q ss_pred HHHhhhHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhc----CCCCccHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRS-----GDAS---ATEYFELGAVMLRRKFYPAATKYLLQAIEKW----DGDDQDLAQVYNA 227 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~----~~~~p~~~~~~~~ 227 (316)
+..+|++++|++.+++++++ .|++ ...+.++|.+|..+|+|++|+.+++++++.. +..+|..+..+++
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~n 376 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMK 376 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHH
Confidence 44789999999999999975 3444 5689999999999999999999999999864 3468889999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHH
Q 021175 228 LGVSYVREGKLDKGISQFETAVKL-----QPGYV---TAWNNLGDAYEK 268 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~ 268 (316)
||.+|..+|++++|+..|++|+++ .|+++ +.+.+++.+...
T Consensus 377 La~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 377 VGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 999999999999999999999985 46664 455667666544
No 209
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.91 E-value=3e-08 Score=100.32 Aligned_cols=115 Identities=11% Similarity=0.126 Sum_probs=93.2
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--------------------
Q 021175 157 IRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG-------------------- 216 (316)
Q Consensus 157 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-------------------- 216 (316)
++.....|++++|+..|.++ ++++.+..+|.++.+.|+|++|+++|..+.+..+.
T Consensus 1112 AKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleel 1186 (1630)
T 1xi4_A 1112 AKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAEL 1186 (1630)
T ss_pred HHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHH
Confidence 34445899999999999875 88999999999999999999999999887764210
Q ss_pred ----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 217 ----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 217 ----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..++ ...+.++|..+...|+|++|..+|+++ ..|..+|.+|.++|++++|+++++++...
T Consensus 1187 e~fI~~~n-~ad~~~iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1187 EEFINGPN-NAHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANST 1250 (1630)
T ss_pred HHHHhCCC-HHHHHHHHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCH
Confidence 1122 234567899999999999999999886 47888999999999999999999988443
No 210
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.91 E-value=2.8e-08 Score=76.21 Aligned_cols=92 Identities=18% Similarity=0.105 Sum_probs=80.5
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHH---
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLR----RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVR--- 234 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~----~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~--- 234 (316)
..+..++|++.|+++.+. .++.+++++|.+|.. .+++++|+++|+++.+ . .++.+++++|.+|..
T Consensus 37 ~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~----~--g~~~a~~~Lg~~y~~G~g 108 (138)
T 1klx_A 37 SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACG----L--NDQDGCLILGYKQYAGKG 108 (138)
T ss_dssp TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH----T--TCHHHHHHHHHHHHHTSS
T ss_pred cCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHc----C--CCHHHHHHHHHHHHCCCC
Confidence 556778899999999987 689999999999999 8999999999999998 2 678899999999999
Q ss_pred -cCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 021175 235 -EGKLDKGISQFETAVKLQPGYVTAWNNLG 263 (316)
Q Consensus 235 -~g~~~~A~~~~~~al~~~p~~~~~~~~lg 263 (316)
.+++++|+++|++|.+. .++.+..+++
T Consensus 109 ~~~d~~~A~~~~~~Aa~~--g~~~A~~~l~ 136 (138)
T 1klx_A 109 VVKNEKQAVKTFEKACRL--GSEDACGILN 136 (138)
T ss_dssp SCCCHHHHHHHHHHHHHT--TCHHHHHHC-
T ss_pred CCcCHHHHHHHHHHHHHC--CCHHHHHHHh
Confidence 99999999999999987 4556666554
No 211
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.87 E-value=6.4e-09 Score=95.13 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=84.0
Q ss_pred HhhhHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcC----CCCccHHHHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRS-----GDAS---ATEYFELGAVMLRRKFYPAATKYLLQAIEKWD----GDDQDLAQVYNALG 229 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~----~~~p~~~~~~~~lg 229 (316)
..|+|++|+..+++++++ .|++ ...+.++|.+|..+|+|++|+.+++++++... ..+|+.+..+++||
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 467899999999999984 4444 56889999999999999999999999998643 36888999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHh-----CCCcHHH
Q 021175 230 VSYVREGKLDKGISQFETAVKL-----QPGYVTA 258 (316)
Q Consensus 230 ~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~ 258 (316)
.+|..+|++++|+..|++|+++ .|+++..
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999986 4666554
No 212
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.84 E-value=1.7e-08 Score=71.84 Aligned_cols=72 Identities=8% Similarity=0.009 Sum_probs=67.7
Q ss_pred CCCCHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 021175 180 GDASATEYFELGAVMLRRKF---YPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 180 ~p~~~~~~~~lg~~~~~~g~---~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 255 (316)
+|++++.+..+|.+++..++ .++|..+++++++ .+|+++.+.+.+|..++..|+|++|+.+++++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~----~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ----LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH----HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999987666 7999999999999 699999999999999999999999999999999999984
No 213
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.74 E-value=6e-08 Score=87.98 Aligned_cols=130 Identities=11% Similarity=0.073 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHH
Q 021175 147 GLLGVGTFFVIRQVLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYN 226 (316)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~ 226 (316)
++.++|..+. ..|.|++|...|.++ ..|..+|.++.+.|+|++|++.++++. ++.+|.
T Consensus 124 a~~~IGd~~~-----~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA~---------~~~~Wk 181 (449)
T 1b89_A 124 HIQQVGDRCY-----DEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKAN---------STRTWK 181 (449)
T ss_dssp ------------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHHT---------CHHHHH
T ss_pred HHHHHHHHHH-----HcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHcC---------CchhHH
Confidence 4444555554 778888888888865 357788888888888888888888772 356777
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 227 ALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 227 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
..+.++...|+++.|..+... +..+|++ ...+..+|.+.|++++|+..+++++.+++.+...+..++.++.+
T Consensus 182 ~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~k 253 (449)
T 1b89_A 182 EVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSK 253 (449)
T ss_dssp HHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHh
Confidence 778888888888888776664 3344443 44678899999999999999999999999999999999887755
No 214
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.72 E-value=3.4e-07 Score=88.27 Aligned_cols=190 Identities=9% Similarity=-0.009 Sum_probs=139.1
Q ss_pred hhhHHHHHHHH-hhccchHHHH-HHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHc--
Q 021175 104 GSSSWLISARV-ANASENVQMD-AVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQEQVRS-- 179 (316)
Q Consensus 104 ~~~~~~~~~~~-~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-- 179 (316)
....|...++. ...++...+. .+++.+....|..... ++..+.+ ....|++++|.+.|++++..
T Consensus 342 ~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~L-------wl~~a~~-----ee~~~~~e~aR~iyek~l~~l~ 409 (679)
T 4e6h_A 342 APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVL-------AFSLSEQ-----YELNTKIPEIETTILSCIDRIH 409 (679)
T ss_dssp CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHH-------HHHHHHH-----HHHTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHH-------HHHHHHH-----HHHhCCHHHHHHHHHHHHHHHH
Confidence 34556666554 3344555564 7787665554443311 1111222 23678899999999999875
Q ss_pred ---------CCC-----------CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcC-CH
Q 021175 180 ---------GDA-----------SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREG-KL 238 (316)
Q Consensus 180 ---------~p~-----------~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g-~~ 238 (316)
.|. ...+|...+....+.|+.+.|.+.|.+|++.. .+.....|...+.+....+ ++
T Consensus 410 ~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~---~~~~~~lyi~~A~lE~~~~~d~ 486 (679)
T 4e6h_A 410 LDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRLK---KLVTPDIYLENAYIEYHISKDT 486 (679)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTG---GGSCTHHHHHHHHHHHTTTSCC
T ss_pred HHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc---CCCChHHHHHHHHHHHHhCCCH
Confidence 243 34578888888888999999999999999820 2334566777777766655 48
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHhhCCCCCC
Q 021175 239 DKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN---NKVARPRRDALKDRVPLYKG 308 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~~l~~l~~~~~~~~~ 308 (316)
+.|.+.|+++++..|+++..+...+......|+.+.|...|++++...|+ ....+......+...|+.+.
T Consensus 487 e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~fE~~~G~~~~ 559 (679)
T 4e6h_A 487 KTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFFESKVGSLNS 559 (679)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHH
T ss_pred HHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999888999999999999999998883 55677778888888887643
No 215
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.65 E-value=3.5e-08 Score=89.55 Aligned_cols=135 Identities=17% Similarity=0.157 Sum_probs=119.5
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
..|++++|++.++++ +++.+|.....++...|+++.|..+..+ +. .+|+... .+...|.+.|++++|
T Consensus 160 ~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~----~~ad~l~---~lv~~Yek~G~~eEa 226 (449)
T 1b89_A 160 HLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IV----VHADELE---ELINYYQDRGYFEEL 226 (449)
T ss_dssp TTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TT----TCHHHHH---HHHHHHHHTTCHHHH
T ss_pred HhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HH----hCHhhHH---HHHHHHHHCCCHHHH
Confidence 899999999999999 4789999999999999999999887775 33 3676644 588899999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHH--cCCHHHHHHHHHHHHhcCC-----CChhHHHHHHHHHhhCCCCCCC
Q 021175 242 ISQFETAVKLQPGYVTAWNNLGDAYEK--KKDLKSALKAFEEVLLFDP-----NNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 242 ~~~~~~al~~~p~~~~~~~~lg~~~~~--~g~~~~A~~~~~~al~~~p-----~~~~a~~~l~~l~~~~~~~~~A 309 (316)
+..+++++.+++.+..++..+|.+|.+ .|+..+.++.|...+.+.| ++...|..+..++...++++.|
T Consensus 227 i~lLe~aL~le~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k~~~~~~~~~~w~e~~~ly~~~~e~d~A 301 (449)
T 1b89_A 227 ITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNA 301 (449)
T ss_dssp HHHHHHHTTSTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHHHHHHHHTTTCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhchHHHH
Confidence 999999999999999999999999875 6788899999998888888 8899999999999998888754
No 216
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=98.62 E-value=4.9e-07 Score=87.17 Aligned_cols=146 Identities=17% Similarity=0.031 Sum_probs=120.9
Q ss_pred HhhhHHHHH-HHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC-------CCc-----------cHH
Q 021175 162 VRRELDLSA-KELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG-------DDQ-----------DLA 222 (316)
Q Consensus 162 ~~~~~~~A~-~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-------~~p-----------~~~ 222 (316)
..|+.++|. +.|++++...|.....|...+......|++++|.+.|+++++..+. ..| ...
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~ 434 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLT 434 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchH
Confidence 567778897 9999999999999999999999999999999999999999984210 013 245
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCCChhHHHHHHHHH
Q 021175 223 QVYNALGVSYVREGKLDKGISQFETAVKL-QPGYVTAWNNLGDAYEKKK-DLKSALKAFEEVLLFDPNNKVARPRRDALK 300 (316)
Q Consensus 223 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~a~~~l~~l~ 300 (316)
.+|...+....+.|+.+.|.+.|.+|++. .+.....|...+.+....| +.+.|...|+++++..|+++..+.......
T Consensus 435 ~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe 514 (679)
T 4e6h_A 435 YVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHH
Confidence 67888888888899999999999999997 4455777877787776665 589999999999999999999887777777
Q ss_pred hhCCCCC
Q 021175 301 DRVPLYK 307 (316)
Q Consensus 301 ~~~~~~~ 307 (316)
...|+.+
T Consensus 515 ~~~~~~~ 521 (679)
T 4e6h_A 515 IYVNEES 521 (679)
T ss_dssp HHHTCHH
T ss_pred HhCCCHH
Confidence 6666543
No 217
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.50 E-value=5.9e-06 Score=61.36 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=75.2
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHH---HHHHHHHHHHhcCCCC-c-cHHHHHHHHHHHHHHcC
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPA---ATKYLLQAIEKWDGDD-Q-DLAQVYNALGVSYVREG 236 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~---A~~~~~~al~~~~~~~-p-~~~~~~~~lg~~~~~~g 236 (316)
.......+.+.|.+....++...++-+++|.++.+..+..+ ++..++..++ .+ | ..-++.+.+|..+++.|
T Consensus 13 ~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~----~~~p~~~Rd~lY~LAvg~yklg 88 (126)
T 1nzn_A 13 SVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP----KGSKEEQRDYVFYLAVGNYRLK 88 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT----TSCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCCcchHHHHHHHHHHHHHHhh
Confidence 45566677778888888788888888999998888877666 8888888777 34 5 56677777888888888
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 021175 237 KLDKGISQFETAVKLQPGYVTAWNNLGDA 265 (316)
Q Consensus 237 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 265 (316)
+|++|.++++..++..|++.++......+
T Consensus 89 ~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 89 EYEKALKYVRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 88888888888888888777766544433
No 218
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.49 E-value=4.1e-06 Score=74.07 Aligned_cols=131 Identities=14% Similarity=0.034 Sum_probs=94.1
Q ss_pred cchHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH--HHHHcCCCCHHHHHHHHHHHH
Q 021175 118 SENVQMDAVYEIGELFELGIQLSYLLLLLGLLGVGTFFVIRQVLVRRELDLSAKELQ--EQVRSGDASATEYFELGAVML 195 (316)
Q Consensus 118 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~--~al~~~p~~~~~~~~lg~~~~ 195 (316)
.+..++.++++.+...+|.....+.....+++. .+. ...............++ .++..+|..+.++..++..+.
T Consensus 213 ~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~---~~~-~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l 288 (372)
T 3ly7_A 213 KSLNRASELLGEIVQSSPEFTYARAEKALVDIV---RHS-QHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSAL 288 (372)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH---HHH-HSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH---Hhc-cCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHH
Confidence 345777889998888888877655544333331 111 00000111111111222 233567999999999999999
Q ss_pred HcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVT 257 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 257 (316)
..|++++|+..+++|++ ++|. ..+|..+|.++...|++++|++.|++|++++|....
T Consensus 289 ~~gd~d~A~~~l~rAl~----Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 289 VKGKTDESYQAINTGID----LEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHTCHHHHHHHHHHHHH----HCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred hCCCHHHHHHHHHHHHh----cCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 99999999999999999 4665 678889999999999999999999999999998753
No 219
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.47 E-value=4.5e-07 Score=77.23 Aligned_cols=89 Identities=6% Similarity=-0.097 Sum_probs=80.5
Q ss_pred hhhHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHHHc-----CChHHHHHHHHHHHHhcCCCCccH-HHHHHHHHHHHHH
Q 021175 163 RRELDLSAKELQEQVRSGDA--SATEYFELGAVMLRR-----KFYPAATKYLLQAIEKWDGDDQDL-AQVYNALGVSYVR 234 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~--~~~~~~~lg~~~~~~-----g~~~~A~~~~~~al~~~~~~~p~~-~~~~~~lg~~~~~ 234 (316)
.+...+|...++++++++|+ +..+|..+|..|... |+.++|.++|++|++ ++|+. ..+++..|..+..
T Consensus 176 l~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~----LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 176 PDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTR----YCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHH----HCCTTCSHHHHHHHHHTTT
T ss_pred HHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHH----hCCCCCchHHHHHHHHHHH
Confidence 34567899999999999999 677999999999995 999999999999999 69975 9999999999988
Q ss_pred -cCCHHHHHHHHHHHHHhCCCc
Q 021175 235 -EGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 235 -~g~~~~A~~~~~~al~~~p~~ 255 (316)
+|++++|.++++++++.+|..
T Consensus 252 ~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 252 PLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TTTCHHHHHHHHHHHHHCCGGG
T ss_pred hcCCHHHHHHHHHHHHcCCCCC
Confidence 599999999999999988874
No 220
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.46 E-value=9.6e-07 Score=65.62 Aligned_cols=101 Identities=16% Similarity=0.056 Sum_probs=86.3
Q ss_pred ChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CcHHHHHHHHHHHHHcCCHH
Q 021175 199 FYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDK---GISQFETAVKLQ-P-GYVTAWNNLGDAYEKKKDLK 273 (316)
Q Consensus 199 ~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~---A~~~~~~al~~~-p-~~~~~~~~lg~~~~~~g~~~ 273 (316)
....+.+.|.+..+ .++....+.+++|.++.+.++..+ ++..+++.++.+ | ..-++.|.+|..+++.|+|+
T Consensus 16 ~l~~~~~~y~~e~~----~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 16 DLLKFEKKFQSEKA----AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHH----HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhc----cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 34556677777776 366788999999999999888777 999999999987 5 56789999999999999999
Q ss_pred HHHHHHHHHHhcCCCChhHHHHHHHHHhhC
Q 021175 274 SALKAFEEVLLFDPNNKVARPRRDALKDRV 303 (316)
Q Consensus 274 ~A~~~~~~al~~~p~~~~a~~~l~~l~~~~ 303 (316)
+|+.+.+..++.+|++.++......+..++
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i 121 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELERLIDKAM 121 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999998877776553
No 221
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=98.27 E-value=2.5e-05 Score=59.39 Aligned_cols=116 Identities=9% Similarity=-0.000 Sum_probs=96.4
Q ss_pred HcCCCCHHHHHHHHHHHHHcCCh------HHHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 178 RSGDASATEYFELGAVMLRRKFY------PAATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFET 247 (316)
Q Consensus 178 ~~~p~~~~~~~~lg~~~~~~g~~------~~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 247 (316)
-..|++++.|........+.|+. ++-.+.|++|+...|. ........|...+.. ...++.++|.+.|+.
T Consensus 7 ~~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~ 85 (161)
T 4h7y_A 7 MMMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQM 85 (161)
T ss_dssp ---CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHH
T ss_pred eeCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHH
Confidence 35789999999999999999999 9999999999997442 112345666666755 566999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHH
Q 021175 248 AVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARP 294 (316)
Q Consensus 248 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~ 294 (316)
++++....+.+|...|....++|+.+.|.+.+.+++.+.|...+...
T Consensus 86 a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~le 132 (161)
T 4h7y_A 86 ARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEMLE 132 (161)
T ss_dssp HHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHHHH
Confidence 99998889999999999999999999999999999999998665543
No 222
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=98.08 E-value=3.5e-05 Score=71.70 Aligned_cols=140 Identities=11% Similarity=-0.089 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCc--------------------------
Q 021175 166 LDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQ-------------------------- 219 (316)
Q Consensus 166 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p-------------------------- 219 (316)
.+.....|++++...|..+..|...+..+...|+.++|.+.|++|+.. |...+
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~ 273 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGE 273 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhc
Confidence 345678999999999999999999999999999999999999999985 42100
Q ss_pred ----------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcCCC
Q 021175 220 ----------DLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKK-DLKSALKAFEEVLLFDPN 288 (316)
Q Consensus 220 ----------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~ 288 (316)
.....|...+....+.++.+.|.+.|++| +..+.....|...+.+....| +.+.|...|+++++..|+
T Consensus 274 ~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~ 352 (493)
T 2uy1_A 274 AESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPD 352 (493)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTT
T ss_pred cchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCC
Confidence 01123344444445577899999999999 433345667777777766655 699999999999999999
Q ss_pred ChhHHHHHHHHHhhCCCCC
Q 021175 289 NKVARPRRDALKDRVPLYK 307 (316)
Q Consensus 289 ~~~a~~~l~~l~~~~~~~~ 307 (316)
.+..+..........|+.+
T Consensus 353 ~~~~~~~yid~e~~~~~~~ 371 (493)
T 2uy1_A 353 STLLKEEFFLFLLRIGDEE 371 (493)
T ss_dssp CHHHHHHHHHHHHHHTCHH
T ss_pred CHHHHHHHHHHHHHcCCHH
Confidence 8887776666666666543
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=98.00 E-value=3.5e-05 Score=59.79 Aligned_cols=130 Identities=11% Similarity=0.026 Sum_probs=74.4
Q ss_pred HHHHHhhhHHHHHHHHHHHHHcCCCCHH---------HHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHH
Q 021175 158 RQVLVRRELDLSAKELQEQVRSGDASAT---------EYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNAL 228 (316)
Q Consensus 158 ~~~~~~~~~~~A~~~~~~al~~~p~~~~---------~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~l 228 (316)
+..++.+.|+.|+.....++....++++ ++..+|++++..++|..|...|+++++.... -+.....+..+
T Consensus 28 k~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~-l~k~~s~~~~~ 106 (167)
T 3ffl_A 28 RDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKA-LSKTSKVRPST 106 (167)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHC-C----------
T ss_pred HHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHH-HhcCCCccccc
Confidence 4455667777777777766655444333 6667777777777777777777777764331 11111111111
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHh
Q 021175 229 GVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKD 301 (316)
Q Consensus 229 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~ 301 (316)
+. ...+. .... .+.+.+..|.++.||.++|++++|+..++.. -.....+.....|++++.
T Consensus 107 ~~----~ss~p-------~s~~-~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 107 GN----SASTP-------QSQC-LPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLYK 166 (167)
T ss_dssp ---------------------C-CCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHCC
T ss_pred cc----cCCCc-------cccc-ccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHhc
Confidence 10 00000 0011 1345688899999999999999999988653 334456677777777764
No 224
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.97 E-value=4.2e-05 Score=59.36 Aligned_cols=98 Identities=9% Similarity=0.002 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHH
Q 021175 152 GTFFVIRQVLVRRELDLSAKELQEQVRSGD---ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNAL 228 (316)
Q Consensus 152 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~l 228 (316)
...+.+...+.+++|.+|...|+++++... ........++. ........ ..+.+.+..+.+
T Consensus 65 ~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~-----------~ss~p~s~-----~~~~e~Elkyki 128 (167)
T 3ffl_A 65 LLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGN-----------SASTPQSQ-----CLPSEIEVKYKL 128 (167)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC------------------------------------CCCCHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccc-----------cCCCcccc-----cccchHHHHHHH
Confidence 345667778899999999999999987533 22221111110 00001111 235577899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 021175 229 GVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAY 266 (316)
Q Consensus 229 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 266 (316)
+.||.+.|++++|+..++.. -..-..+.+...||..|
T Consensus 129 a~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 129 AECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 99999999999999997653 22234577777777665
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.97 E-value=9.5e-05 Score=55.05 Aligned_cols=81 Identities=12% Similarity=0.098 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHH
Q 021175 222 AQVYNALGVSYVREGKL---DKGISQFETAVKLQPG-YVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRD 297 (316)
Q Consensus 222 ~~~~~~lg~~~~~~g~~---~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~ 297 (316)
+.+.+++|.++.+.++. .+++..+++.++.+|. .-++++.+|..+.++|+|++|+++.+..++.+|++..+.....
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 34555555555554433 3566666666666663 3566666777777777777777777777777777666666555
Q ss_pred HHHhh
Q 021175 298 ALKDR 302 (316)
Q Consensus 298 ~l~~~ 302 (316)
.+..+
T Consensus 120 ~Ie~k 124 (134)
T 3o48_A 120 MVEDK 124 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.91 E-value=0.00019 Score=54.19 Aligned_cols=84 Identities=12% Similarity=0.095 Sum_probs=59.1
Q ss_pred cHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHH
Q 021175 220 DLAQVYNALGVSYVREGKL---DKGISQFETAVKLQP-GYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPR 295 (316)
Q Consensus 220 ~~~~~~~~lg~~~~~~g~~---~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 295 (316)
-...+.+++|.++.+..+. .+++..+++.++..| ..-++.|.+|..++++|+|++|.++.+..++.+|+|.++...
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 3455666666666665443 357777777777777 346777888888888888888888888888888888777776
Q ss_pred HHHHHhhC
Q 021175 296 RDALKDRV 303 (316)
Q Consensus 296 l~~l~~~~ 303 (316)
...+..+.
T Consensus 117 k~~Ie~~i 124 (144)
T 1y8m_A 117 KSMVEDKI 124 (144)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 227
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=97.88 E-value=0.00075 Score=62.66 Aligned_cols=135 Identities=8% Similarity=-0.027 Sum_probs=101.3
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHH----------------------------------------HHHHcCChH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGA----------------------------------------VMLRRKFYP 201 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~----------------------------------------~~~~~g~~~ 201 (316)
..|+.++|...|++++.. |.+...+...+. ...+.++.+
T Consensus 225 ~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~ 303 (493)
T 2uy1_A 225 GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLE 303 (493)
T ss_dssp HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHH
Confidence 788999999999999999 987554443333 222456788
Q ss_pred HHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 021175 202 AATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREG-KLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFE 280 (316)
Q Consensus 202 ~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 280 (316)
.|...|++| + ..+.....|...+.+-...+ +.+.|.+.|+++++..|+++..+...+......|+.+.|...|+
T Consensus 304 ~AR~i~~~A-~----~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~e 378 (493)
T 2uy1_A 304 LFRKLFIEL-G----NEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFK 378 (493)
T ss_dssp HHHHHHHHH-T----TSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHh-h----CCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 899999999 4 23334566766676666655 69999999999999999999988888888889999999999999
Q ss_pred HHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 281 EVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 281 ~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
++. .....|......+...|+.
T Consensus 379 r~~----k~~~lw~~~~~fE~~~G~~ 400 (493)
T 2uy1_A 379 RLE----KTSRMWDSMIEYEFMVGSM 400 (493)
T ss_dssp HSC----CBHHHHHHHHHHHHHHSCH
T ss_pred HHH----HHHHHHHHHHHHHHHCCCH
Confidence 872 3455555555555555543
No 228
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.72 E-value=0.0038 Score=58.00 Aligned_cols=120 Identities=11% Similarity=0.050 Sum_probs=99.8
Q ss_pred hhhHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 163 RRELDLSAKELQEQVRSGD-ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
.++.++|.+.|++..+.+- .+...|..+-..+.+.|++++|.+.+++..+. ...| +...|..+=..|.+.|+.++|
T Consensus 83 ~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~--g~~P-d~~tyn~lI~~~~~~g~~~~A 159 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAF--GIQP-RLRSYGPALFGFCRKGDADKA 159 (501)
T ss_dssp CHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCCC-CHHHHHHHHHHHHHTTCHHHH
T ss_pred cchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCCC-ccceehHHHHHHHHCCCHHHH
Confidence 4568899999999877643 36788999999999999999999999998873 1234 466788888889999999999
Q ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 242 ISQFETAVKLQP-GYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 242 ~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
.+.|++..+..- -+...|..+-.+|.+.|+.++|.+.+++..+.
T Consensus 160 ~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 160 YEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDL 204 (501)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHh
Confidence 999999887542 25677888999999999999999999998764
No 229
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.71 E-value=0.0012 Score=49.18 Aligned_cols=97 Identities=8% Similarity=0.049 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHhcCCCCc-cHHHHHHHHHHHHHHcCCHHH
Q 021175 165 ELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFY---PAATKYLLQAIEKWDGDDQ-DLAQVYNALGVSYVREGKLDK 240 (316)
Q Consensus 165 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~---~~A~~~~~~al~~~~~~~p-~~~~~~~~lg~~~~~~g~~~~ 240 (316)
+.....+.|.+-. .+.-.+.+-+++|.++.+..+. .+++..++..++ .+| ..-++++.+|..+++.|+|++
T Consensus 22 eL~~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~----~~~~~~Rd~LYyLAvg~yklgdY~~ 96 (134)
T 3o48_A 22 QLEILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK----EAESRRRECLYYLTIGCYKLGEYSM 96 (134)
T ss_dssp HHHHHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH----HCGGGHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCcchhHHHHHHHHHHHHHhhhHHH
Confidence 3444444554433 3334688999999999988665 478999999988 467 578899999999999999999
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHH
Q 021175 241 GISQFETAVKLQPGYVTAWNNLGDAY 266 (316)
Q Consensus 241 A~~~~~~al~~~p~~~~~~~~lg~~~ 266 (316)
|.++.+..++..|++.++......+-
T Consensus 97 Ar~y~d~lL~~eP~N~QA~~Lk~~Ie 122 (134)
T 3o48_A 97 AKRYVDTLFEHERNNKQVGALKSMVE 122 (134)
T ss_dssp HHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHH
Confidence 99999999999999988876655544
No 230
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.68 E-value=0.0016 Score=60.60 Aligned_cols=145 Identities=10% Similarity=-0.036 Sum_probs=112.3
Q ss_pred HhhhHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHcCC---------hHHHHHHHHHHHHhcCCCCccHHHHHHHHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGD-ASATEYFELGAVMLRRKF---------YPAATKYLLQAIEKWDGDDQDLAQVYNALGVS 231 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~~~~~g~---------~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~ 231 (316)
+.|+.++|.+.|++..+.+- .+...|..+-.++...+. .++|.+.|++..+. ...| +...|..+-..
T Consensus 38 k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~--G~~P-d~~tyn~lI~~ 114 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD--KVVP-NEATFTNGARL 114 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT--TCCC-CHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh--CCCC-CHHHHHHHHHH
Confidence 89999999999999887642 356667777666665443 68899999988773 1233 56678889999
Q ss_pred HHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-ChhHHHHHHHHHhhCCCCCCC
Q 021175 232 YVREGKLDKGISQFETAVKLQ-PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN-NKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 232 ~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~l~~l~~~~~~~~~A 309 (316)
|.+.|+.++|.+.+++..+.. .-+...|..+-..|.+.|+.++|.+.|++..+..-. +...+..+-..+.+.|+.++|
T Consensus 115 ~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A 194 (501)
T 4g26_A 115 AVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKV 194 (501)
T ss_dssp HHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHH
Confidence 999999999999999988753 235778888889999999999999999998875322 456677777777777776554
No 231
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.65 E-value=0.0023 Score=48.21 Aligned_cols=81 Identities=9% Similarity=0.030 Sum_probs=69.7
Q ss_pred CCCHHHHHHHHHHHHHcCCh---HHHHHHHHHHHHhcCCCCc-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Q 021175 181 DASATEYFELGAVMLRRKFY---PAATKYLLQAIEKWDGDDQ-DLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYV 256 (316)
Q Consensus 181 p~~~~~~~~lg~~~~~~g~~---~~A~~~~~~al~~~~~~~p-~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 256 (316)
....++-++++.++.+..+. .+++..++..++ ..| ..-++.+.+|..+++.|+|++|.++.+..++..|++.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~----~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~ 111 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYK----EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 111 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHH----HCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcH
Confidence 56789999999999998765 478999999988 355 6788999999999999999999999999999999998
Q ss_pred HHHHHHHHH
Q 021175 257 TAWNNLGDA 265 (316)
Q Consensus 257 ~~~~~lg~~ 265 (316)
++......+
T Consensus 112 QA~~Lk~~I 120 (144)
T 1y8m_A 112 QVGALKSMV 120 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 876655444
No 232
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.0051 Score=59.58 Aligned_cols=119 Identities=13% Similarity=0.177 Sum_probs=86.6
Q ss_pred hhh-HHHHHHHHHHHHHcCCCCHHHHHHHHHHHH--Hc-CChHHHHHHHHHHHHhc----CCCC----------ccHHHH
Q 021175 163 RRE-LDLSAKELQEQVRSGDASATEYFELGAVML--RR-KFYPAATKYLLQAIEKW----DGDD----------QDLAQV 224 (316)
Q Consensus 163 ~~~-~~~A~~~~~~al~~~p~~~~~~~~lg~~~~--~~-g~~~~A~~~~~~al~~~----~~~~----------p~~~~~ 224 (316)
.++ ++.|+..+++..+.+|..... +..+.+.. .. .+--+|++...++++.. .... |.....
T Consensus 261 t~~~~~~a~~~le~L~~~~p~~~~~-~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~L 339 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTKKDPIHDIY-YKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDL 339 (754)
T ss_dssp CGGGHHHHHHHHHHHHHHCGGGHHH-HHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhhCCchhHH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHH
Confidence 344 688999999999999865432 22222222 11 23446778787777521 0011 222334
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEV 282 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 282 (316)
+...+..+..+|+++-|++..++|+...|.....|+.|+.+|..+|+++.|+-.++.+
T Consensus 340 L~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 340 LNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 5556777888999999999999999999999999999999999999999999887766
No 233
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.95 E-value=0.0058 Score=56.46 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhh
Q 021175 223 QVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDR 302 (316)
Q Consensus 223 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~ 302 (316)
.++..||.+......++.|..+|++|..++|++...++.||.+....|+.-+|+-+|-+++......+.+..++..+..+
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 46677899999999999999999999999999999999999999999999999999999998887789999999888765
Q ss_pred C
Q 021175 303 V 303 (316)
Q Consensus 303 ~ 303 (316)
.
T Consensus 233 ~ 233 (497)
T 1ya0_A 233 A 233 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 234
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.68 E-value=0.017 Score=51.75 Aligned_cols=89 Identities=21% Similarity=0.250 Sum_probs=67.1
Q ss_pred HcCChHHHHHHHHHHHHhcCC-CCc-----------------cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q 021175 196 RRKFYPAATKYLLQAIEKWDG-DDQ-----------------DLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVT 257 (316)
Q Consensus 196 ~~g~~~~A~~~~~~al~~~~~-~~p-----------------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 257 (316)
..|+.++|.+.+++|+.++.. .-+ ....+...++..+...|++++|+..+++++..+|-+-.
T Consensus 127 ~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~ 206 (388)
T 2ff4_A 127 AAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREP 206 (388)
T ss_dssp HTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH
T ss_pred hCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH
Confidence 445666666666666665432 000 11223445677788899999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 021175 258 AWNNLGDAYEKKKDLKSALKAFEEVLL 284 (316)
Q Consensus 258 ~~~~lg~~~~~~g~~~~A~~~~~~al~ 284 (316)
++..+-.++...|+..+|++.|+++.+
T Consensus 207 ~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 207 LWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999999999888755
No 235
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.61 E-value=0.03 Score=42.56 Aligned_cols=87 Identities=11% Similarity=0.046 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHcCCCC--------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCH
Q 021175 167 DLSAKELQEQVRSGDAS--------ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKL 238 (316)
Q Consensus 167 ~~A~~~~~~al~~~p~~--------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~ 238 (316)
++-.+.|++++..-|.. ...|...+.. ...+|.++|.+.|+.++.. +...+.+|...|..-.++|+.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~----hKkFAKiwi~~AqFEiRqgnl 110 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARAN----CKKFAFVHISFAQFELSQGNV 110 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHH----CTTBHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHH----hHHHHHHHHHHHHHHHHcccH
Confidence 77778888988876642 4566667655 5669999999999999994 556699999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcHHH
Q 021175 239 DKGISQFETAVKLQPGYVTA 258 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~ 258 (316)
+.|.+.+.+|+...|...+.
T Consensus 111 ~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 111 KKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHHHHHHhccCCCcHHH
Confidence 99999999999999987554
No 236
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.11 Score=40.70 Aligned_cols=48 Identities=15% Similarity=0.028 Sum_probs=41.7
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIE 212 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (316)
.+..|+++.|.+..++. ++...|..+|......|+++-|+.+|+++-.
T Consensus 15 AL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 34789999999887764 6788999999999999999999999998755
No 237
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.027 Score=51.20 Aligned_cols=104 Identities=14% Similarity=-0.011 Sum_probs=84.5
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--Cc----
Q 021175 182 ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQP--GY---- 255 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~~---- 255 (316)
....++..+|..|...|++++|.+.|.++...... .......+...-.++...+++..+...++++-.... .+
T Consensus 129 e~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~-~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~ 207 (429)
T 4b4t_R 129 EQAQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIS-TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERR 207 (429)
T ss_dssp CCSSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTC-CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHH
Confidence 35668899999999999999999999999886553 456778888889999999999999999999876532 22
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLFD 286 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 286 (316)
.......|.++...++|.+|...|..+....
T Consensus 208 ~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 208 NRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 2344566778888999999999998887653
No 238
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.38 E-value=0.016 Score=53.53 Aligned_cols=79 Identities=22% Similarity=0.197 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 021175 186 EYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDA 265 (316)
Q Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 265 (316)
++..+|++......++.|..+|.+|.. ..|++...|+.||.+....|+.-+|+-+|-+++......+.+..|+...
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~----~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~ 229 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQ----LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKA 229 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHH----hCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHH
Confidence 566788888888888888888888888 5888888888888888888888888888888887766677777777766
Q ss_pred HHH
Q 021175 266 YEK 268 (316)
Q Consensus 266 ~~~ 268 (316)
+.+
T Consensus 230 f~~ 232 (497)
T 1ya0_A 230 LSK 232 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=96.29 E-value=0.095 Score=43.93 Aligned_cols=121 Identities=11% Similarity=-0.016 Sum_probs=84.5
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHH
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLD 239 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~ 239 (316)
.++.|+.+++++..+..++.+|.+++....+...+.-.|+|+.|.+-++.+.+ ++|.....-..+-...
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~----l~p~~~~~a~~yr~lI------- 75 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIK----LFPEYLPGASQLRHLV------- 75 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCGGGHHHHHHHHHHH-------
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH----hCchhhHHHHHHHHHH-------
Confidence 45889999999999999999999999999999999999999999999999999 5776543321111110
Q ss_pred HHHHHHHHHHHh--CC---CcHH---HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChh
Q 021175 240 KGISQFETAVKL--QP---GYVT---AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKV 291 (316)
Q Consensus 240 ~A~~~~~~al~~--~p---~~~~---~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~ 291 (316)
.|+..=++.+.- .| ..+. ....-+......|+.++|.+.-.++++..|..+.
T Consensus 76 ~aE~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~~G 135 (273)
T 1zbp_A 76 KAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGF 135 (273)
T ss_dssp HHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCE
T ss_pred HHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCcccCC
Confidence 111111111111 11 1222 2333455566789999999999999998876543
No 240
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=96.09 E-value=0.2 Score=44.71 Aligned_cols=99 Identities=18% Similarity=0.060 Sum_probs=79.0
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC--ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---CCc----HH
Q 021175 187 YFELGAVMLRRKFYPAATKYLLQAIEKWDGDD--QDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ---PGY----VT 257 (316)
Q Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~---p~~----~~ 257 (316)
-..+|..|+..|+|.+|.+.+.+..+.....+ ....+++..-..+|...|++.++...+.+|.... +.+ +.
T Consensus 102 ~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~ 181 (394)
T 3txn_A 102 EARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGA 181 (394)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHH
Confidence 44899999999999999999999988765422 3456777888899999999999999999987653 122 34
Q ss_pred HHHHHHHHHH-HcCCHHHHHHHHHHHHhc
Q 021175 258 AWNNLGDAYE-KKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 258 ~~~~lg~~~~-~~g~~~~A~~~~~~al~~ 285 (316)
....-|..+. ..++|.+|...|-++.+-
T Consensus 182 i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 182 LDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 5566788888 899999999999888743
No 241
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.84 E-value=0.14 Score=39.70 Aligned_cols=120 Identities=12% Similarity=0.024 Sum_probs=82.9
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKG 241 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A 241 (316)
+-.+|+.++-.-.= .-|..++--..++..++-.|+|..|.-++. .-+.....+.-+.||.+.++|..|
T Consensus 14 kY~dYdt~~fLsa~---L~~~~~eY~lL~~I~LyyngEY~R~Lf~L~---------~lNT~Ts~YYk~LCy~klKdYkkA 81 (242)
T 3kae_A 14 RYRDYETAIFLAAC---LLPCKPEYRMLMSIVLYLNGEYTRALFHLH---------KLNTCTSKYYESLCYKKKKDYKKA 81 (242)
T ss_dssp HTTCHHHHHHHHHH---HC----CTHHHHHHHHHHTTCHHHHHHHHH---------TCCBHHHHHHHHHHHHHTTCHHHH
T ss_pred hcccccHHHHHHHH---HccCChHHHhhhhhhhhhcchHhHHHHHHH---------hcchHHHHHHHHHHHHHHHHHHHH
Confidence 34455554432222 223333556678888999999998876652 334455666678899999999999
Q ss_pred HHHHHHHHH--h---------------CCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHH
Q 021175 242 ISQFETAVK--L---------------QPGYVT-AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVAR 293 (316)
Q Consensus 242 ~~~~~~al~--~---------------~p~~~~-~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~ 293 (316)
+..++..+. . +|.+.+ .+..+|.+.-+.|+.++|+.++.......|-.+..-
T Consensus 82 ~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 82 IKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp HHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 999999993 2 233333 455678999999999999999999998887655443
No 242
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.63 E-value=0.11 Score=46.34 Aligned_cols=85 Identities=7% Similarity=0.050 Sum_probs=70.0
Q ss_pred HhhhHHHHHHHHHHHHHcCCCC----------------------HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCc
Q 021175 162 VRRELDLSAKELQEQVRSGDAS----------------------ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQ 219 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~----------------------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p 219 (316)
..++.+.+...+++++...... ..+...++..+...|++++|+..+++++. .+|
T Consensus 127 ~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~----~~P 202 (388)
T 2ff4_A 127 AAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF----EHP 202 (388)
T ss_dssp HTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HST
T ss_pred hCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCC
Confidence 4567788888888888753211 13445667788899999999999999999 699
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 220 DLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 220 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
.+..++..+-.++...|+..+|++.|++.-+
T Consensus 203 ~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 203 YREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999988765
No 243
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.39 E-value=0.048 Score=52.85 Aligned_cols=108 Identities=12% Similarity=-0.005 Sum_probs=78.9
Q ss_pred cCC-hHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHH---HcCCHHHHHHHHHHHHHh--------CCCc---------
Q 021175 197 RKF-YPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYV---REGKLDKGISQFETAVKL--------QPGY--------- 255 (316)
Q Consensus 197 ~g~-~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~---~~g~~~~A~~~~~~al~~--------~p~~--------- 255 (316)
.++ ++.|++.+++..+ .+|.....+ ..+.+.. ...+--+|++.+.++++. .+.+
T Consensus 261 t~~~~~~a~~~le~L~~----~~p~~~~~~-~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~ 335 (754)
T 4gns_B 261 TPSLVDFTIDYLKGLTK----KDPIHDIYY-KTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNC 335 (754)
T ss_dssp CGGGHHHHHHHHHHHHH----HCGGGHHHH-HHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHh----hCCchhHHH-HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCc
Confidence 445 5889999999988 477554332 2222221 123455788888887742 2232
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCCCCC
Q 021175 256 -VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 256 -~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~~~A 309 (316)
...+..-+..+...|+++-|+++.++++...|.+-..|..|+.+|..+|+|+.|
T Consensus 336 ~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~A 390 (754)
T 4gns_B 336 MSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKA 390 (754)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHH
T ss_pred chHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHH
Confidence 234445567777899999999999999999999999999999999999999865
No 244
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.37 E-value=0.19 Score=48.81 Aligned_cols=107 Identities=17% Similarity=0.122 Sum_probs=63.7
Q ss_pred HHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcC
Q 021175 161 LVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREG 236 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g 236 (316)
+..|++++|.+..+ ..++...|..+|..+.+.++++.|+++|.++-....- ....+.+....++......|
T Consensus 663 l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 663 LKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 36777777776543 3467889999999999999999999999986331000 01122233344555556666
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 021175 237 KLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFE 280 (316)
Q Consensus 237 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 280 (316)
+++.|...|.+. ++ ....-.+|.+.|++++|...-+
T Consensus 738 ~~~~A~~~~~~~-----g~---~~~a~~~~~~~~~~~~A~~lA~ 773 (814)
T 3mkq_A 738 KFNLAFNAYWIA-----GD---IQGAKDLLIKSQRFSEAAFLGS 773 (814)
T ss_dssp CHHHHHHHHHHH-----TC---HHHHHHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHHHHHc-----CC---HHHHHHHHHHcCChHHHHHHHH
Confidence 666666554332 01 1112334566666666665544
No 245
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.092 Score=48.36 Aligned_cols=128 Identities=13% Similarity=0.074 Sum_probs=63.3
Q ss_pred HHhhhHHHHHHHHHHHHH-----------cCCCCHHHHHHHHHHHHHcCChHHHH----------HHHHHHHHhcC--CC
Q 021175 161 LVRRELDLSAKELQEQVR-----------SGDASATEYFELGAVMLRRKFYPAAT----------KYLLQAIEKWD--GD 217 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~-----------~~p~~~~~~~~lg~~~~~~g~~~~A~----------~~~~~al~~~~--~~ 217 (316)
+++++++++.+.-...+. .++-.+.+|+..+.++...|+..+.. ..+..+++... ..
T Consensus 147 ~d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D 226 (523)
T 4b4t_S 147 WDSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHD 226 (523)
T ss_dssp --------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSS
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccC
Confidence 377888888776655441 23345678888888888877766532 23333333211 12
Q ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCh
Q 021175 218 DQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY-------VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNK 290 (316)
Q Consensus 218 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 290 (316)
....+..++.+=..|...+.|++|.....++. .|.. ...++.+|.++.-+++|.+|.+++..|++..|.+.
T Consensus 227 ~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 227 NETKAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp SCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred cchhHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 33557778888999999999999999999985 4432 45677899999999999999999999999888654
No 246
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.25 E-value=0.077 Score=44.48 Aligned_cols=57 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred HHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 021175 195 LRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 255 (316)
.+.|+.++|++.....++ .+|.++.....+-..+.-.|+++.|.+.++.+.+++|+.
T Consensus 8 l~~g~L~~al~~~~~~VR----~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~ 64 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIK----ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEY 64 (273)
T ss_dssp TTTTCHHHHHHHHHHHHH----TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGG
T ss_pred HhCCCHHHHHHHHHHHHH----hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchh
Confidence 344555555555555555 355555555555555555555555555555555555554
No 247
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.23 E-value=0.34 Score=47.04 Aligned_cols=82 Identities=20% Similarity=0.194 Sum_probs=54.9
Q ss_pred HHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCcHHHHHHH--
Q 021175 193 VMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL--------QPGYVTAWNNL-- 262 (316)
Q Consensus 193 ~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l-- 262 (316)
.....|++++|.+..+ ..++...|.++|..+.+.|+++.|+++|.++-+. ..++.+....+
T Consensus 661 ~~l~~~~~~~A~~~~~---------~~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~ 731 (814)
T 3mkq_A 661 LALKVGQLTLARDLLT---------DESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAK 731 (814)
T ss_dssp HHHHHTCHHHHHHHHT---------TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHH---------hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHH
Confidence 3456778887776632 3355689999999999999999999999886321 13333322222
Q ss_pred ----------H-HHHHHcCCHHHHHHHHHHHH
Q 021175 263 ----------G-DAYEKKKDLKSALKAFEEVL 283 (316)
Q Consensus 263 ----------g-~~~~~~g~~~~A~~~~~~al 283 (316)
+ .+|.+.|++++|++.|.+.-
T Consensus 732 ~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~ 763 (814)
T 3mkq_A 732 DAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQ 763 (814)
T ss_dssp HHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred HHHHcCchHHHHHHHHHcCCHHHHHHHHHHcC
Confidence 2 35566788888887775543
No 248
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=94.67 E-value=0.63 Score=42.29 Aligned_cols=102 Identities=14% Similarity=0.060 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC--ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hCCCc---
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDD--QDLAQVYNALGVSYVREGKLDKGISQFETAVK---LQPGY--- 255 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~---~~p~~--- 255 (316)
+.....|+.++...|++.+|.+.+.....-..... ....+.+.....+|...+++.+|...++++.. ..+..
T Consensus 137 arl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~l 216 (445)
T 4b4t_P 137 ARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESL 216 (445)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHH
Confidence 45667889999999999999999888765322212 23466777888889999999999999988743 22333
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 256 -VTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 256 -~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
...+...|.++...++|.+|..+|.++.+.
T Consensus 217 k~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 217 KLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 345567788888899999999998888764
No 249
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.06 E-value=1.6 Score=33.88 Aligned_cols=123 Identities=18% Similarity=0.101 Sum_probs=70.8
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh-cC----------C--CCccHHH-HHHH
Q 021175 162 VRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEK-WD----------G--DDQDLAQ-VYNA 227 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~~----------~--~~p~~~~-~~~~ 227 (316)
-.|+|..+.-.+. +-+...+.+....++...++|..|+.++++.++- .+ . .+|.+.+ .+..
T Consensus 45 yngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l 119 (242)
T 3kae_A 45 LNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESL 119 (242)
T ss_dssp HTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHH
T ss_pred hcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHH
Confidence 3555555554433 2344555555666666666666666666666621 00 0 2333333 3344
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc----------------------------------------------------
Q 021175 228 LGVSYVREGKLDKGISQFETAVKLQPGY---------------------------------------------------- 255 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~~p~~---------------------------------------------------- 255 (316)
+|.++...|+.+||+.++......+|-.
T Consensus 120 ~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vEnliyeN~vp~~~d~~~i~~~~~~~i~~~y~~d~~~lHe~~s~~~ikkY 199 (242)
T 3kae_A 120 LGDLCTLSGYREEGIGHYVRSFGKSFLFSPVENLLLENKVPQKRDKENVRQTGRRGIEEEYVSDSIEFHESLSPSLVKKY 199 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHTTCCCCCC-----------CHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHhcCHHHhhhHhhhhcCCccccchHHHHHhhcCCCcccchHHHHhhhhccchhhhhhhHHHHHHhccHHHHHHH
Confidence 5666666666666666666655544221
Q ss_pred -------HH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Q 021175 256 -------VT-AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNN 289 (316)
Q Consensus 256 -------~~-~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 289 (316)
.. .-.+.+.-|..+|-.++...+|....+.+|..
T Consensus 200 ~n~iPGiGSY~va~aa~~yf~lg~~d~s~~lf~~lR~kDP~F 241 (242)
T 3kae_A 200 MEHVPGIGSYFISNAARRYFNLGMNDKSKACFELVRRKDPMF 241 (242)
T ss_dssp HTSTTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTT
T ss_pred HHhCCCchhHHHHHHHHHHHhcccchhHHHHHHHHHhcCCCc
Confidence 11 12245566778888888888888888888853
No 250
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=93.66 E-value=0.68 Score=47.39 Aligned_cols=106 Identities=9% Similarity=-0.066 Sum_probs=80.3
Q ss_pred HHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC-------------------CCccHHHHHHHHHHHHHHcC
Q 021175 176 QVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG-------------------DDQDLAQVYNALGVSYVREG 236 (316)
Q Consensus 176 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-------------------~~p~~~~~~~~lg~~~~~~g 236 (316)
.....|.++...+.+|.++...|++++|.++|+++..-... .....+.+|......+.+.|
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~ 913 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 913 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTS
T ss_pred HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcC
Confidence 34456777778899999999999999999999987532110 01123456777888889999
Q ss_pred CHHHHHHHHHHHHHhCCC-cH----HHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 237 KLDKGISQFETAVKLQPG-YV----TAWNNLGDAYEKKKDLKSALKAFEE 281 (316)
Q Consensus 237 ~~~~A~~~~~~al~~~p~-~~----~~~~~lg~~~~~~g~~~~A~~~~~~ 281 (316)
.++.+++..+.|++..+. +. ..|.++=..+.+.|+|++|...+..
T Consensus 914 ~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 914 AYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp CCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred CHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 999999999999987653 32 2567777788899999999877754
No 251
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=92.76 E-value=1 Score=45.13 Aligned_cols=86 Identities=13% Similarity=0.004 Sum_probs=36.7
Q ss_pred HhhhHHHHHHHHHHHHHc----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCC
Q 021175 162 VRRELDLSAKELQEQVRS----GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGK 237 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~ 237 (316)
+.|+.++|.+.|++..+. -..+...|+.+-..+.+.|+.++|.+.|++..+. ...| +...|+.+=.++.+.|+
T Consensus 139 K~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~--G~~P-DvvTYntLI~glcK~G~ 215 (1134)
T 3spa_A 139 LTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDA--GLTP-DLLSYAAALQCMGRQDQ 215 (1134)
T ss_dssp HHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCCC-CHHHHHHHHHHHHHHTC
T ss_pred hCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHc--CCCC-cHHHHHHHHHHHHhCCC
Confidence 445555555555432211 1223444555555555555555555555544442 0122 23333333334444444
Q ss_pred -HHHHHHHHHHHHH
Q 021175 238 -LDKGISQFETAVK 250 (316)
Q Consensus 238 -~~~A~~~~~~al~ 250 (316)
.++|.+.+++..+
T Consensus 216 ~~e~A~~Ll~EM~~ 229 (1134)
T 3spa_A 216 DAGTIERCLEQMSQ 229 (1134)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 2444455544444
No 252
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=92.70 E-value=1.2 Score=42.26 Aligned_cols=118 Identities=7% Similarity=-0.042 Sum_probs=79.9
Q ss_pred HhhhHHHHHHHHHHHHHcCCCCHH----HHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCC
Q 021175 162 VRRELDLSAKELQEQVRSGDASAT----EYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGK 237 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p~~~~----~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~ 237 (316)
..++.+.|...+.+..+..+-+.. ....++......+...++...+.+... ...++.......+. ..+.|+
T Consensus 226 ar~d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~e~~~r~-Alr~~d 300 (618)
T 1qsa_A 226 ARQDAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIM----RSQSTSLIERRVRM-ALGTGD 300 (618)
T ss_dssp HHHCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHH----TCCCHHHHHHHHHH-HHHHTC
T ss_pred HhcCHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccc----cCCChHHHHHHHHH-HHHCCC
Confidence 455778888888876654433322 222233333334546778888888766 23333333333444 456799
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 021175 238 LDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLL 284 (316)
Q Consensus 238 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 284 (316)
++.|..++++.-...+......|.+|..+..+|+.++|...|+++.+
T Consensus 301 ~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 301 RRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 99999999776554345688899999999999999999999999875
No 253
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.52 E-value=2.3 Score=37.87 Aligned_cols=111 Identities=10% Similarity=-0.090 Sum_probs=80.0
Q ss_pred HHhhhHHHHHHHHHHHHHcCC------CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--Ccc-HHHHHHHHHHH
Q 021175 161 LVRRELDLSAKELQEQVRSGD------ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD--DQD-LAQVYNALGVS 231 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~al~~~p------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~p~-~~~~~~~lg~~ 231 (316)
+..|+|.+|.+.+.+..+.-. .-.+.+..-..+|...+++.++...+.++....... +|. .+.....-|..
T Consensus 110 ~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~Gi~ 189 (394)
T 3txn_A 110 FDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSGIL 189 (394)
T ss_dssp HHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhhHH
Confidence 389999999999988876322 124677778888999999999999999998754332 332 35556667889
Q ss_pred HH-HcCCHHHHHHHHHHHHHhCCCc-----HHHHHHHHHHHHHcCC
Q 021175 232 YV-REGKLDKGISQFETAVKLQPGY-----VTAWNNLGDAYEKKKD 271 (316)
Q Consensus 232 ~~-~~g~~~~A~~~~~~al~~~p~~-----~~~~~~lg~~~~~~g~ 271 (316)
+. ..++|.+|...|-++++..... ..+...++.|-...++
T Consensus 190 ~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 190 HAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCC
Confidence 99 8999999999999998644322 2334445555555554
No 254
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.19 E-value=1.3 Score=39.99 Aligned_cols=93 Identities=8% Similarity=-0.004 Sum_probs=74.1
Q ss_pred HhhhHHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC-Ccc-HHHHHHHHHHHHHHcC
Q 021175 162 VRRELDLSAKELQEQVRSGD---ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD-DQD-LAQVYNALGVSYVREG 236 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-~p~-~~~~~~~lg~~~~~~g 236 (316)
+.|++++|.+.|.+...... ...+.+.....++...+++..+..++.++....... +|. ........|..+...+
T Consensus 143 ~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r 222 (429)
T 4b4t_R 143 QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR 222 (429)
T ss_dssp HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTS
T ss_pred HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999877432 457888899999999999999999999998765432 222 2344556688888999
Q ss_pred CHHHHHHHHHHHHHhCCC
Q 021175 237 KLDKGISQFETAVKLQPG 254 (316)
Q Consensus 237 ~~~~A~~~~~~al~~~p~ 254 (316)
+|.+|...|-+++.-...
T Consensus 223 ~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 223 NFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp CHHHHHHHHHHHHHHSCC
T ss_pred hHHHHHHHHHHHhccCCc
Confidence 999999999998875543
No 255
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=91.73 E-value=5.2 Score=40.15 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=80.9
Q ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHH
Q 021175 181 DASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ-PGYVTAW 259 (316)
Q Consensus 181 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~ 259 (316)
...-..+..+-..|.+.|+.++|.+.+++..+.....-.-+...|+.+=..|.+.|+.++|.+.|++-.+.. .-+...|
T Consensus 124 ~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTY 203 (1134)
T 3spa_A 124 SGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSY 203 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH
T ss_pred HhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHH
Confidence 344557888999999999999999999775541000122356788888889999999999999999998753 2256677
Q ss_pred HHHHHHHHHcCC-HHHHHHHHHHHHhc
Q 021175 260 NNLGDAYEKKKD-LKSALKAFEEVLLF 285 (316)
Q Consensus 260 ~~lg~~~~~~g~-~~~A~~~~~~al~~ 285 (316)
..+-.++.+.|+ .++|.+.+++..+.
T Consensus 204 ntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 204 AAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 777788999998 47888999988774
No 256
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.34 E-value=1.7 Score=44.45 Aligned_cols=114 Identities=11% Similarity=-0.020 Sum_probs=81.3
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---------------
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ--------------- 252 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--------------- 252 (316)
..+...+...+.++-+.+. .. .-|.++...+-+|.++...|++++|.++|+++-.--
T Consensus 816 ~~l~~~l~~~~~~~~~~~l----~~----~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~ 887 (1139)
T 4fhn_B 816 TELVEKLFLFKQYNACMQL----IG----WLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQE 887 (1139)
T ss_dssp HHHHHHHHHHSCTTHHHHH----HH----HSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHH----hh----hccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccc
Confidence 3455556677777766543 23 234445556889999999999999999998874210
Q ss_pred --------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChh-----HHHHHHHHHhhCCCCCCC
Q 021175 253 --------PGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKV-----ARPRRDALKDRVPLYKGV 309 (316)
Q Consensus 253 --------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----a~~~l~~l~~~~~~~~~A 309 (316)
...+..|......+.+.|.++.+++..+.|++..+.+.+ .|.++=+....+|+|++|
T Consensus 888 ~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~A 957 (1139)
T 4fhn_B 888 IAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAGKFDAA 957 (1139)
T ss_dssp HHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGG
T ss_pred ccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHH
Confidence 112345667778899999999999999999987654332 456666677888898876
No 257
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.99 E-value=4.9 Score=36.36 Aligned_cols=92 Identities=13% Similarity=-0.029 Sum_probs=70.2
Q ss_pred HHHhhhHHHHHHHHHHHHHc-C-C----CCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC-C-Cc-cHHHHHHHHHH
Q 021175 160 VLVRRELDLSAKELQEQVRS-G-D----ASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG-D-DQ-DLAQVYNALGV 230 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~-~-p----~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~-~p-~~~~~~~~lg~ 230 (316)
+...|++.+|...++..... . . ...+.+......+...+++.+|...++++...... . .| -....+...|.
T Consensus 147 ~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~ 226 (445)
T 4b4t_P 147 KKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVK 226 (445)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHH
Confidence 34899999999999987542 1 1 12567888889999999999999999997543211 1 22 23556777899
Q ss_pred HHHHcCCHHHHHHHHHHHHHh
Q 021175 231 SYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 231 ~~~~~g~~~~A~~~~~~al~~ 251 (316)
.+...++|.+|-.+|.++.+.
T Consensus 227 ~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 227 ISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhc
Confidence 999999999999999999864
No 258
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=88.42 E-value=1.6 Score=34.07 Aligned_cols=75 Identities=13% Similarity=0.056 Sum_probs=50.2
Q ss_pred HHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Q 021175 192 AVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKD 271 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~ 271 (316)
......|+++.|.+..++. ++...|..+|......|+++-|+++|+++-+ +..+...|...|+
T Consensus 13 ~LAL~lg~l~~A~e~a~~l---------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D--------~~~L~~Ly~~tg~ 75 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL---------NDSITWERLIQEALAQGNASLAEMIYQTQHS--------FDKLSFLYLVTGD 75 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH---------CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTC--------HHHHHHHHHHHTC
T ss_pred HHHHhcCCHHHHHHHHHHh---------CCHHHHHHHHHHHHHcCChHHHHHHHHHhCC--------HHHHHHHHHHhCC
Confidence 4566778888887764322 4567888888888888888888888877633 2334455666777
Q ss_pred HHHHHHHHHHHH
Q 021175 272 LKSALKAFEEVL 283 (316)
Q Consensus 272 ~~~A~~~~~~al 283 (316)
.++-.+.-+.+.
T Consensus 76 ~e~L~kla~iA~ 87 (177)
T 3mkq_B 76 VNKLSKMQNIAQ 87 (177)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 665554444443
No 259
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=88.40 E-value=16 Score=34.47 Aligned_cols=132 Identities=6% Similarity=-0.072 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHH
Q 021175 166 LDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQF 245 (316)
Q Consensus 166 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 245 (316)
..++...+.+.....+++.......+. .+..|+++.|..++++.-. .....+...+-+|.++...|+.++|...|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~e~~~r~-Alr~~d~~~a~~~~~~l~~----~~~~~~r~~YW~~ra~~~~g~~~~a~~~~ 342 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSLIERRVRM-ALGTGDRRGLNTWLARLPM----EAKEKDEWRYWQADLLLERGREAEAKEIL 342 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHHHHHHHHH-HHHHTCHHHHHHHHHHSCT----TGGGSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChHHHHHHHHH-HHHCCCHHHHHHHHHHccc----cccccHhHHHHHHHHHHHcCCHHHHHHHH
Confidence 456666666665544444444444444 4567999999998876554 23456788899999999999999999999
Q ss_pred HHHHHhC-------------C----------Cc-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHH
Q 021175 246 ETAVKLQ-------------P----------GY-----VTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRD 297 (316)
Q Consensus 246 ~~al~~~-------------p----------~~-----~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~ 297 (316)
+++.+-. | .. ...-...+..+...|....|...+....+.. ++.....++
T Consensus 343 ~~~a~~~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~~--~~~~~~~la 420 (618)
T 1qsa_A 343 HQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSK--SKTEQAQLA 420 (618)
T ss_dssp HHHHTSCSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--CHHHHHHHH
T ss_pred HHHhcCCChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhcC--CHHHHHHHH
Confidence 9887521 0 00 0123455667788999999998888877532 233334455
Q ss_pred HHHhhCC
Q 021175 298 ALKDRVP 304 (316)
Q Consensus 298 ~l~~~~~ 304 (316)
.+....|
T Consensus 421 ~~a~~~~ 427 (618)
T 1qsa_A 421 RYAFNNQ 427 (618)
T ss_dssp HHHHHTT
T ss_pred HHHHHCC
Confidence 5444444
No 260
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.48 E-value=2.7 Score=38.69 Aligned_cols=70 Identities=10% Similarity=-0.019 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCC---CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGD---DQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~---~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 255 (316)
+..++.+-..|...+.|++|..+..++. +|.. ++.....++.+|.++..+++|.+|.+++..|++..|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 5677788889999999999999999885 2221 22346778889999999999999999999999987754
No 261
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.65 E-value=6.3 Score=39.40 Aligned_cols=94 Identities=13% Similarity=0.034 Sum_probs=56.0
Q ss_pred HHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------
Q 021175 190 LGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL------------------ 251 (316)
Q Consensus 190 lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------------------ 251 (316)
+...+...|.++-|.+ .+. .-|.++..-+-+|.++...|++++|.++|++|-.-
T Consensus 816 l~~~L~~~~~~~~a~e----L~~----~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll 887 (950)
T 4gq2_M 816 LVEKLFLFKQYNACMQ----LIG----WLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIA 887 (950)
T ss_dssp HHHHHHHTTCHHHHHH----HGG----GCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHH
T ss_pred HHHHHHHhcHHHHHHH----HHh----hcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhcc
Confidence 4455556666654432 223 23334444466777777777777777777655410
Q ss_pred ---CCC--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCChh
Q 021175 252 ---QPG--YVTAWNNLGDAYEKKKDLKSALKAFEEVLLF-DPNNKV 291 (316)
Q Consensus 252 ---~p~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~~~ 291 (316)
.++ ....|.....++.+.|-++.+++..+.|++. .++++.
T Consensus 888 ~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 888 EKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred CcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 011 1345666777888888888888888888864 344443
No 262
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=84.84 E-value=13 Score=32.04 Aligned_cols=16 Identities=6% Similarity=-0.062 Sum_probs=10.9
Q ss_pred HHhhhHHHHHHHHHHH
Q 021175 161 LVRRELDLSAKELQEQ 176 (316)
Q Consensus 161 ~~~~~~~~A~~~~~~a 176 (316)
..+++|++|++.+...
T Consensus 46 ~~~k~y~eAidLL~~G 61 (336)
T 3lpz_A 46 SKQGNWAAAVDILASV 61 (336)
T ss_dssp HHTTCHHHHHHHHHHH
T ss_pred HhhcCHHHHHHHHHHH
Confidence 3677888887765553
No 263
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=83.78 E-value=9.4 Score=32.69 Aligned_cols=25 Identities=12% Similarity=0.114 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHH
Q 021175 221 LAQVYNALGVSYVREGKLDKGISQF 245 (316)
Q Consensus 221 ~~~~~~~lg~~~~~~g~~~~A~~~~ 245 (316)
++..+..+|..|.+.|++.+|..+|
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~ 157 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYF 157 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHH
Confidence 4455555555555555555555554
No 264
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=82.44 E-value=2.7 Score=28.29 Aligned_cols=17 Identities=24% Similarity=0.630 Sum_probs=8.8
Q ss_pred HHcCCHHHHHHHHHHHH
Q 021175 233 VREGKLDKGISQFETAV 249 (316)
Q Consensus 233 ~~~g~~~~A~~~~~~al 249 (316)
-+.|+|++|+..|++++
T Consensus 30 D~~g~y~eAl~lY~~ai 46 (83)
T 2w2u_A 30 DKEGNAEEAITNYKKAI 46 (83)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHH
Confidence 34455555555554444
No 265
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=81.75 E-value=2.9 Score=28.09 Aligned_cols=18 Identities=28% Similarity=0.660 Sum_probs=9.9
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 021175 233 VREGKLDKGISQFETAVK 250 (316)
Q Consensus 233 ~~~g~~~~A~~~~~~al~ 250 (316)
-+.|+|++|+..|+++++
T Consensus 22 D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 22 DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 345666666665555543
No 266
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=78.38 E-value=23 Score=28.05 Aligned_cols=82 Identities=6% Similarity=0.003 Sum_probs=62.7
Q ss_pred HHHHHHHHhcCC-----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHHH
Q 021175 205 KYLLQAIEKWDG-----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL--QPGYVTAWNNLGDAYEKKKDLKSALK 277 (316)
Q Consensus 205 ~~~~~al~~~~~-----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~~ 277 (316)
..++++++.+.. .+|.....|...+..+ ..+...++.+.|+..... ....+..|...|..+...|++++|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 578888876542 4666777777777655 234477888888887764 45678888999999999999999999
Q ss_pred HHHHHHhcCC
Q 021175 278 AFEEVLLFDP 287 (316)
Q Consensus 278 ~~~~al~~~p 287 (316)
.|+..++.+-
T Consensus 137 Vy~~GI~~~A 146 (202)
T 3esl_A 137 LLELGAENNC 146 (202)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999998653
No 267
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=77.28 E-value=12 Score=27.99 Aligned_cols=54 Identities=19% Similarity=0.050 Sum_probs=39.6
Q ss_pred HHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 232 YVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 232 ~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
...+|+.++=.+.+...+..++-.++....+|.+|.+.|+..+|-+.+.+|-+.
T Consensus 101 lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~k 154 (172)
T 1wy6_A 101 LVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK 154 (172)
T ss_dssp HHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHh
Confidence 456777777777777766666667888888888888888888888888877653
No 268
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.97 E-value=37 Score=33.90 Aligned_cols=94 Identities=9% Similarity=-0.012 Sum_probs=67.3
Q ss_pred HHHhhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC-------------------cc
Q 021175 160 VLVRRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDD-------------------QD 220 (316)
Q Consensus 160 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-------------------p~ 220 (316)
....+.++- ..+.+..-|.++-.-+.+|.++...|++++|.++|++|-.-..... ..
T Consensus 820 L~~~~~~~~----a~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~ 895 (950)
T 4gq2_M 820 LFLFKQYNA----CMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNL 895 (950)
T ss_dssp HHHTTCHHH----HHHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSH
T ss_pred HHHhcHHHH----HHHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccch
Confidence 334454443 2345566777888889999999999999999999999864321100 01
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHH
Q 021175 221 LAQVYNALGVSYVREGKLDKGISQFETAVKLQ-PGYVT 257 (316)
Q Consensus 221 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~ 257 (316)
...+|.....++...+-++.+++..+.|++.- +++..
T Consensus 896 ~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~ 933 (950)
T 4gq2_M 896 LSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDED 933 (950)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCcc
Confidence 23477788889999999999999999999854 44443
No 269
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=76.95 E-value=6.4 Score=31.36 Aligned_cols=81 Identities=14% Similarity=0.128 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCC-ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDD-QDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNL 262 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 262 (316)
....+.+|..+...++|.+|.+++..|.+.+++.. .+.-.+...+--+-+-+|+... .+.+++ .+. ..+..+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~-~~ll~~----~~~--~~y~~L 86 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT-VELLKK----YHL--MQFAEV 86 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC-HHHHHH----TTC--GGGHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC-HHHhhh----Cch--hHHHHH
Confidence 45677888888888888888888888888644311 1222233344444556677553 222321 222 235566
Q ss_pred HHHHHHcCCH
Q 021175 263 GDAYEKKKDL 272 (316)
Q Consensus 263 g~~~~~~g~~ 272 (316)
..++ +.||.
T Consensus 87 ~~Av-r~Gdl 95 (203)
T 3t5x_A 87 TRAV-SEGNL 95 (203)
T ss_dssp HHHH-HHTCH
T ss_pred HHHH-HhCCH
Confidence 5554 45654
No 270
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=76.89 E-value=5 Score=27.38 Aligned_cols=28 Identities=21% Similarity=0.215 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 021175 222 AQVYNALGVSYVREGKLDKGISQFETAV 249 (316)
Q Consensus 222 ~~~~~~lg~~~~~~g~~~~A~~~~~~al 249 (316)
+..+-..+..+.+.|+|++||++.++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4455566777777788888777766655
No 271
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=76.46 E-value=6.7 Score=34.12 Aligned_cols=69 Identities=20% Similarity=0.156 Sum_probs=49.8
Q ss_pred CCHHHHHHHHHHHHHcCC--hHHHHHHHHHHHHhcCC-CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 182 ASATEYFELGAVMLRRKF--YPAATKYLLQAIEKWDG-DDQDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~--~~~A~~~~~~al~~~~~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
..|.++-+||++-...-. ...++..|.+|+..... .+..+...|..+|-.+++.+++.+|++.+-+|-+
T Consensus 253 rYPmALgnLgDLEe~~pt~gr~~~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 253 TYPMAIANLGDLEEISPTPGRPPAEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHHhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 457777788877665432 23488888888875332 2334556777888899999999999999988765
No 272
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=76.32 E-value=21 Score=27.30 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=16.7
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 254 GYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 254 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..+..|...|..+...|++.+|.+.|+..++.
T Consensus 94 ~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~ 125 (164)
T 2wvi_A 94 SLAQFYISWAEEYEARENFRKADAIFQEGIQQ 125 (164)
T ss_dssp TBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34445555555555555555555555555543
No 273
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=73.65 E-value=13 Score=27.75 Aligned_cols=50 Identities=18% Similarity=0.151 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Q 021175 163 RRELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIE 212 (316)
Q Consensus 163 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 212 (316)
+|.-++-.+.+...+..++-.+.....+|.+|.+.|+..+|.+.+.+|.+
T Consensus 104 ~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 104 QGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp TTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 33333333333333333333445555555555555555555555555544
No 274
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=73.63 E-value=6.7 Score=26.92 Aligned_cols=18 Identities=6% Similarity=0.303 Sum_probs=9.6
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 021175 233 VREGKLDKGISQFETAVK 250 (316)
Q Consensus 233 ~~~g~~~~A~~~~~~al~ 250 (316)
-..|+|++|+..|.++++
T Consensus 26 D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 26 DAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 344555555555555544
No 275
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=73.02 E-value=17 Score=27.45 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=50.0
Q ss_pred HHHHHHHHHhcCC-----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHH
Q 021175 204 TKYLLQAIEKWDG-----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL--QPGYVTAWNNLGDAYEKKKDLKSAL 276 (316)
Q Consensus 204 ~~~~~~al~~~~~-----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~ 276 (316)
...++++++.+.. .+|.....|...+... +++.+.|+..... ....+..|...|..+...|++++|.
T Consensus 48 ~~lLErc~~~f~~~~~YknD~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~ 121 (152)
T 4a1g_A 48 ITLLEHLMKEFLDKKKYHNDPRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHAS 121 (152)
T ss_dssp HHHHHHHHHHHTTCGGGTTCHHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3455555554421 3555566666555432 3366666666653 3456777888888888888888888
Q ss_pred HHHHHHHhcC
Q 021175 277 KAFEEVLLFD 286 (316)
Q Consensus 277 ~~~~~al~~~ 286 (316)
+.|+..++.+
T Consensus 122 ~Vy~~Gi~~~ 131 (152)
T 4a1g_A 122 AVLQRGIQNQ 131 (152)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 8888888754
No 276
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=71.91 E-value=18 Score=23.56 Aligned_cols=27 Identities=22% Similarity=0.501 Sum_probs=14.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 021175 228 LGVSYVREGKLDKGISQFETAVKLQPG 254 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~~p~ 254 (316)
+|..+...|++++|..+|-+|+...|+
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 455555555555555555555555444
No 277
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=71.84 E-value=14 Score=33.48 Aligned_cols=92 Identities=15% Similarity=0.057 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHHcC-----CC--C-----H----HHHHHHHHHHHHcCChHHHHHHHHHHHHhcC--C--CCc--cH
Q 021175 164 RELDLSAKELQEQVRSG-----DA--S-----A----TEYFELGAVMLRRKFYPAATKYLLQAIEKWD--G--DDQ--DL 221 (316)
Q Consensus 164 ~~~~~A~~~~~~al~~~-----p~--~-----~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~--~--~~p--~~ 221 (316)
...+++...+.++.... |+ . - ....++-.+|++.++..-+...++..-.... . ..| +.
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 45667777888877641 11 1 1 1233455789999999999988865433211 0 112 45
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCc
Q 021175 222 AQVYNALGVSYVREGKLDKGISQFETAVKL-QPGY 255 (316)
Q Consensus 222 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~ 255 (316)
...+|.+|..+...++|.+|.+.+.+|++. .|..
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 678889999999999999999999999998 6643
No 278
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=69.75 E-value=11 Score=33.37 Aligned_cols=69 Identities=9% Similarity=0.019 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHcCCh--HHHHHHHHHHHHhcCC-CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 182 ASATEYFELGAVMLRRKFY--PAATKYLLQAIEKWDG-DDQDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~~--~~A~~~~~~al~~~~~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
..+.++-+||++-...-.. ..++..|.+|+..... ....+...|..+|-.+++.+++.+|+..+-+|-+
T Consensus 275 rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 275 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp TCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 3566777777766543222 2478888888874332 2334556777788899999999999999987765
No 279
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=69.72 E-value=9.5 Score=25.54 Aligned_cols=18 Identities=0% Similarity=0.150 Sum_probs=9.8
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 021175 233 VREGKLDKGISQFETAVK 250 (316)
Q Consensus 233 ~~~g~~~~A~~~~~~al~ 250 (316)
-..|+|++|+..|.++++
T Consensus 24 D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 24 DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 344555555555555554
No 280
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=69.67 E-value=20 Score=28.90 Aligned_cols=78 Identities=9% Similarity=0.138 Sum_probs=53.1
Q ss_pred HHHHHHHHHhcCC-----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHcCCHHHHH
Q 021175 204 TKYLLQAIEKWDG-----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL--QPGYVTAWNNLGDAYEKKKDLKSAL 276 (316)
Q Consensus 204 ~~~~~~al~~~~~-----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~g~~~~A~ 276 (316)
...++++++.+.. .+|.....|...+.. .+++.+.|+..... .-..+..|...|..+...|++++|.
T Consensus 97 ~~lLErc~~~F~~~~rYknD~RyLklWl~Ya~~------~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~ 170 (223)
T 4aez_C 97 VTLLERCTREFVRNPLYKDDVRYLRIWMQYVNY------IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKAD 170 (223)
T ss_dssp HHHHHHHHHHTTTCGGGTTCHHHHHHHHHHHTT------CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHhcccccccCCHHHHHHHHHHHHc------cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHH
Confidence 4667777775432 355566666665542 24555666666654 4556788888888888888888888
Q ss_pred HHHHHHHhcCC
Q 021175 277 KAFEEVLLFDP 287 (316)
Q Consensus 277 ~~~~~al~~~p 287 (316)
+.|+..++.+-
T Consensus 171 ~Vy~~Gi~~~A 181 (223)
T 4aez_C 171 EVYQKGKRMKA 181 (223)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 88888887653
No 281
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=69.33 E-value=9.2 Score=25.78 Aligned_cols=19 Identities=5% Similarity=0.267 Sum_probs=11.4
Q ss_pred HHHcCCHHHHHHHHHHHHH
Q 021175 232 YVREGKLDKGISQFETAVK 250 (316)
Q Consensus 232 ~~~~g~~~~A~~~~~~al~ 250 (316)
.-..|+|++|+..|.++++
T Consensus 26 ~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 26 LDSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 4455666666666666554
No 282
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=69.19 E-value=8.3 Score=27.73 Aligned_cols=18 Identities=17% Similarity=0.497 Sum_probs=10.7
Q ss_pred HHcCCHHHHHHHHHHHHH
Q 021175 233 VREGKLDKGISQFETAVK 250 (316)
Q Consensus 233 ~~~g~~~~A~~~~~~al~ 250 (316)
-..|+|++|+.+|.++++
T Consensus 29 D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 29 DKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHH
Confidence 345666666666666554
No 283
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.07 E-value=16 Score=23.71 Aligned_cols=37 Identities=8% Similarity=0.076 Sum_probs=30.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHH
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRR 296 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 296 (316)
..+|+.+...|++++|..+|-+|+...|+-.+....+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~ 57 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL 57 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4689999999999999999999999988765554433
No 284
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=68.86 E-value=9.8 Score=25.42 Aligned_cols=32 Identities=19% Similarity=0.232 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 239 DKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 239 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
++|++..++|++. -+.|++++|+.+|.++++.
T Consensus 9 ~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie~ 40 (83)
T 2v6y_A 9 DMARKYAILAVKA---------------DKEGKVEDAITYYKKAIEV 40 (83)
T ss_dssp HHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHHH
Confidence 4677777777654 4566766666666665543
No 285
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=66.71 E-value=10 Score=25.83 Aligned_cols=30 Identities=17% Similarity=0.031 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEK 213 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 213 (316)
+..+-..+..+...|+|++|+++.+++...
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~y 44 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATTY 44 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 344556778888899999999998888863
No 286
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=66.08 E-value=17 Score=32.25 Aligned_cols=81 Identities=7% Similarity=0.021 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHcCC--hHHHHHHHHHHHHhcCC-CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------C
Q 021175 182 ASATEYFELGAVMLRRKF--YPAATKYLLQAIEKWDG-DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL------Q 252 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~--~~~A~~~~~~al~~~~~-~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~ 252 (316)
..|.++.+||.+..-... ...+++.|++|+..... ....+...|..+|-.+++.+++.+|+..+-++-+. .
T Consensus 260 ~YPmALgnLgDLEei~pt~grp~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~ 339 (489)
T 4gq4_A 260 RYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYC 339 (489)
T ss_dssp TCHHHHHHHHHHHHHSCCTTSCCHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCC
T ss_pred hcchhhhcccCHhhcCCCCCCCCHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccc
Confidence 467777888877654322 24578889998885332 23344667788899999999999999999888753 2
Q ss_pred CCcHHHHHHH
Q 021175 253 PGYVTAWNNL 262 (316)
Q Consensus 253 p~~~~~~~~l 262 (316)
.++.+.|-.+
T Consensus 340 reDeEiYke~ 349 (489)
T 4gq4_A 340 REDEEIYKEF 349 (489)
T ss_dssp TTCHHHHHHH
T ss_pred cchHHHHHHH
Confidence 3455555444
No 287
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=64.35 E-value=30 Score=27.45 Aligned_cols=68 Identities=7% Similarity=0.005 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG 254 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 254 (316)
...|...+..+ ..++..++.+.|.-.... ++.-..+..|...|..+...|++++|.+.|+.+++..-.
T Consensus 80 LklWl~Ya~~~-~~~~~~~p~~if~~L~~~--~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 80 LKIWIWYINLF-LSNNFHESENTFKYMFNK--GIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR 147 (202)
T ss_dssp HHHHHHHHHHH-STTCHHHHHHHHHHHHHH--TSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhh-cccccCCHHHHHHHHHHC--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 45666666654 233466888888877763 245677889999999999999999999999999997643
No 288
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=61.35 E-value=16 Score=33.07 Aligned_cols=91 Identities=14% Similarity=0.076 Sum_probs=62.8
Q ss_pred ChHHHHHHHHHHHHhcCC-CC-------c-cHHHH---HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--C--------cH
Q 021175 199 FYPAATKYLLQAIEKWDG-DD-------Q-DLAQV---YNALGVSYVREGKLDKGISQFETAVKLQP--G--------YV 256 (316)
Q Consensus 199 ~~~~A~~~~~~al~~~~~-~~-------p-~~~~~---~~~lg~~~~~~g~~~~A~~~~~~al~~~p--~--------~~ 256 (316)
..+++.....++...+-. .+ | ..... -+++=.+|++.|+..-+...++..-...+ . -.
T Consensus 141 ~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v 220 (455)
T 3t5v_B 141 FLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQI 220 (455)
T ss_dssp HHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceE
Confidence 356666677777765321 01 1 12222 23456789999999999888865433322 1 14
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc-CCCC
Q 021175 257 TAWNNLGDAYEKKKDLKSALKAFEEVLLF-DPNN 289 (316)
Q Consensus 257 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~-~p~~ 289 (316)
..+|.+|.++...+++.+|.+++.+|++. .|..
T Consensus 221 ~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 221 EYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 67789999999999999999999999998 7765
No 289
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=61.01 E-value=34 Score=23.47 Aligned_cols=28 Identities=21% Similarity=0.446 Sum_probs=18.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 021175 228 LGVSYVREGKLDKGISQFETAVKLQPGY 255 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~~p~~ 255 (316)
+|..+...|+++.|+.+|-+|+...|+-
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~qP 53 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQP 53 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 6666777777777777777776665543
No 290
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=60.04 E-value=23 Score=28.05 Aligned_cols=55 Identities=5% Similarity=-0.112 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-----HHHHHHHHHHHcCCHHH
Q 021175 220 DLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVT-----AWNNLGDAYEKKKDLKS 274 (316)
Q Consensus 220 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~-----~~~~lg~~~~~~g~~~~ 274 (316)
+.....+.+|.+++..++|.+|.+.+.+|++..|.... +...+--+-.-+|+...
T Consensus 12 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~ 71 (203)
T 3t5x_A 12 QRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPT 71 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 45667888999999999999999999999999887643 23334444456777543
No 291
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=55.57 E-value=66 Score=24.44 Aligned_cols=60 Identities=13% Similarity=0.040 Sum_probs=42.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHH-HH--HHHHHcCCHHHHHHHHHHHHhc
Q 021175 226 NALGVSYVREGKLDKGISQFETAVKLQPGY------VTAWNN-LG--DAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 226 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~------~~~~~~-lg--~~~~~~g~~~~A~~~~~~al~~ 285 (316)
+.-|..++..|+|=+|-+.++..-...+.. .....+ ++ ..+.+.|+...|...+.+++..
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 445677788888888888888888776543 233333 33 3445689999999999998773
No 292
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=54.19 E-value=22 Score=23.70 Aligned_cols=33 Identities=18% Similarity=0.074 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Q 021175 166 LDLSAKELQEQVRSGDASATEYFELGAVMLRRKFYPAATKYLLQAIEK 213 (316)
Q Consensus 166 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 213 (316)
.++|++...++++ .-..|+|++|+.+|.++++.
T Consensus 16 ~~~Ai~lv~~Ave---------------~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 16 EEMARKYAINAVK---------------ADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHHH---------------HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHHhccHHHHHHHHHHHHHH
Confidence 4556666665544 45778899998888888873
No 293
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=53.42 E-value=17 Score=24.03 Aligned_cols=27 Identities=15% Similarity=0.156 Sum_probs=22.3
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHh
Q 021175 187 YFELGAVMLRRKFYPAATKYLLQAIEK 213 (316)
Q Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 213 (316)
...+|.-|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 456777788889999999999988885
No 294
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=53.18 E-value=28 Score=33.13 Aligned_cols=50 Identities=14% Similarity=0.011 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH
Q 021175 223 QVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDL 272 (316)
Q Consensus 223 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~ 272 (316)
......|...+..|+|.-|.+....++..+|++.++...++.+|.++|..
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 34455677888999999999999999999999999999999999988754
No 295
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.06 E-value=26 Score=25.05 Aligned_cols=13 Identities=15% Similarity=0.373 Sum_probs=6.6
Q ss_pred hHHHHHHHHHHHH
Q 021175 200 YPAATKYLLQAIE 212 (316)
Q Consensus 200 ~~~A~~~~~~al~ 212 (316)
+++|..+..++++
T Consensus 19 h~~AF~~Is~AL~ 31 (116)
T 2dl1_A 19 YKKAFLFVNKGLN 31 (116)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 4455555555554
No 296
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=52.30 E-value=1.2e+02 Score=26.55 Aligned_cols=89 Identities=12% Similarity=-0.030 Sum_probs=61.8
Q ss_pred HhhhHHHHHHHHHHHHHcC-----------------CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC---CCc-c
Q 021175 162 VRRELDLSAKELQEQVRSG-----------------DASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG---DDQ-D 220 (316)
Q Consensus 162 ~~~~~~~A~~~~~~al~~~-----------------p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~---~~p-~ 220 (316)
...+.+++.+.+++....- .....+...++..|...|+.++|...++++-...+. .+| -
T Consensus 88 ~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v 167 (393)
T 4b4t_O 88 DSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRI 167 (393)
T ss_dssp HTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHH
Confidence 4567888888887653211 011345667788899999999999999998765332 233 3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 221 LAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 221 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
....|...+..|...+++.++....-..+.
T Consensus 168 ~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 168 TNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 455566677888889999888777666664
No 297
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=50.91 E-value=52 Score=28.70 Aligned_cols=45 Identities=18% Similarity=0.297 Sum_probs=36.0
Q ss_pred HHHHHHHHHHh-----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 241 GISQFETAVKL-----QPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 241 A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
++..|.+|+.. +..+.-.|..+|..+++.+++.+|+..+.++-..
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~V 325 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYV 325 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHH
Confidence 67777777764 3455777888999999999999999999887653
No 298
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=50.42 E-value=45 Score=29.91 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=25.5
Q ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 218 DQDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 218 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
.+....++..+|++|+.+|+|++|++..++++.
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 345566777788888888888888888888875
No 299
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=50.11 E-value=32 Score=26.30 Aligned_cols=63 Identities=16% Similarity=0.230 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 021175 184 ATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG 254 (316)
Q Consensus 184 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 254 (316)
...|...+... +++.+.|.-.... .+.-..+..|...|..+...|++.+|.++|+.+++....
T Consensus 66 LklWl~ya~~~------~~p~~if~~L~~~--~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 66 LNLWLKLGRLC------NEPLDMYSYLHNQ--GIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp HHHHHHHHHHC------SCHHHHHHHHHHT--TSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhc------CCHHHHHHHHHHC--CcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 44555555542 3466677666652 145677888899999999999999999999999987643
No 300
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=49.81 E-value=82 Score=23.88 Aligned_cols=65 Identities=8% Similarity=0.008 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCChHHHHHHHHHHHHhcCCC--CccHHHHHHH-H--HHHHHHcCCHHHHHHHHHHHHHh
Q 021175 187 YFELGAVMLRRKFYPAATKYLLQAIEKWDGD--DQDLAQVYNA-L--GVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 187 ~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~p~~~~~~~~-l--g~~~~~~g~~~~A~~~~~~al~~ 251 (316)
-+.-|..++..|+|=+|-+.++..-...+.. .........+ + |..+.+.|+...|...+++++..
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 3556677778899999999999888742211 0011223333 3 44556789999999999999873
No 301
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=49.61 E-value=1.2e+02 Score=25.84 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=32.7
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCC-CCCCCCCCCC
Q 021175 265 AYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPL-YKGVPVKSKD 315 (316)
Q Consensus 265 ~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~-~~~A~~~~~~ 315 (316)
..++.++|.-|....++.+++.|....+......+.....+ .++.++++++
T Consensus 216 ~a~K~KNy~tAa~fArrLLel~p~~~~a~qArkil~~ce~~~~Da~eidyD~ 267 (325)
T 3mv2_A 216 QHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADSMASDAIPIDFDP 267 (325)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHTSCCCSSCCSCCT
T ss_pred HHHHhhhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCCCccccCCCC
Confidence 45788999999999999999999765544433333222222 2444555554
No 302
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.54 E-value=1.3e+02 Score=26.36 Aligned_cols=93 Identities=14% Similarity=0.133 Sum_probs=64.7
Q ss_pred HHHHHcCChHHHHHHHHHHHHhcCC-------------CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-------
Q 021175 192 AVMLRRKFYPAATKYLLQAIEKWDG-------------DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL------- 251 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~~~~-------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------- 251 (316)
.+.....+.++|.+++++..+.... .......+...++..|...|+.++|...++++-..
T Consensus 84 ~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~ 163 (393)
T 4b4t_O 84 ASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSI 163 (393)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCS
T ss_pred HHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCc
Confidence 4455678899999999877543210 01123456667889999999999999999988753
Q ss_pred CCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 021175 252 QPG-YVTAWNNLGDAYEKKKDLKSALKAFEEVLL 284 (316)
Q Consensus 252 ~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 284 (316)
+|. +...+...+..|...+++.++....-..+.
T Consensus 164 ~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 164 PLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 121 244555667778889999888877666664
No 303
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=48.88 E-value=18 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.286 Sum_probs=22.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
...+|+-|...|+|+.|+.+|+.+++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 45578888899999999999998886
No 304
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=48.81 E-value=1.1e+02 Score=27.24 Aligned_cols=57 Identities=7% Similarity=0.148 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHh-----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc------CCCChhHHHHH
Q 021175 240 KGISQFETAVKL-----QPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLF------DPNNKVARPRR 296 (316)
Q Consensus 240 ~A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~------~p~~~~a~~~l 296 (316)
.+++.|++|+.. +..+.-.|..+|-.+.+.+++.+|+..+.++-+. ..++.+.+..+
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~ 349 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEF 349 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHH
Confidence 456777777764 3455778888999999999999999999888653 34556666554
No 305
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=47.42 E-value=51 Score=29.65 Aligned_cols=33 Identities=18% Similarity=0.308 Sum_probs=25.2
Q ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 218 DQDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 218 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
.+....++..+|++|+.+|+|++|++..++++.
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 345566777788888888888888888888775
No 306
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=46.20 E-value=29 Score=33.02 Aligned_cols=50 Identities=10% Similarity=0.188 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 257 TAWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 257 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
+.....|......|+|..|.+..+.++..+|++.+++..++..+.++|..
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 34455677777899999999999999999999999999999988887754
No 307
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=45.83 E-value=68 Score=21.79 Aligned_cols=55 Identities=11% Similarity=-0.025 Sum_probs=32.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc----HHHHHHHH--HHHHHcCCHHHHHHHHHHHHh
Q 021175 228 LGVSYVREGKLDKGISQFETAVKLQPGY----VTAWNNLG--DAYEKKKDLKSALKAFEEVLL 284 (316)
Q Consensus 228 lg~~~~~~g~~~~A~~~~~~al~~~p~~----~~~~~~lg--~~~~~~g~~~~A~~~~~~al~ 284 (316)
-|..++..|+|=+|-+.++..-...|+. .....+++ ..+...|+. |...+.+++.
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4555667777777777777777766542 12223333 334456666 7777777765
No 308
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=44.29 E-value=71 Score=29.04 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=26.8
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKLQ 252 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 252 (316)
+....++..+|++|+.+|+|++|++..++++...
T Consensus 200 ~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 200 IDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 4556677788888888888888888888888653
No 309
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.21 E-value=74 Score=21.76 Aligned_cols=33 Identities=9% Similarity=0.152 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhH
Q 021175 260 NNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVA 292 (316)
Q Consensus 260 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a 292 (316)
..+|+.+...|+++.|+.+|-+|+...|+-.+.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~L 56 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 56 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 458999999999999999999999988764433
No 310
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=44.12 E-value=39 Score=22.63 Aligned_cols=22 Identities=18% Similarity=0.205 Sum_probs=16.4
Q ss_pred HHHHHcCChHHHHHHHHHHHHh
Q 021175 192 AVMLRRKFYPAATKYLLQAIEK 213 (316)
Q Consensus 192 ~~~~~~g~~~~A~~~~~~al~~ 213 (316)
.-.-..|+|++|+.+|..+++.
T Consensus 24 ve~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 24 VELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHH
Confidence 3345678888888888888874
No 311
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=43.59 E-value=83 Score=25.50 Aligned_cols=50 Identities=10% Similarity=-0.083 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhcC----CCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 021175 201 PAATKYLLQAIEKWD----GDDQDLAQVYNALGVSYVR-EGKLDKGISQFETAVK 250 (316)
Q Consensus 201 ~~A~~~~~~al~~~~----~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 250 (316)
+.|.+.|++|.+... +.+|-......|.+..|+. .|+.++|.+..++|++
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467777777776542 2344444455566665555 7888888887777764
No 312
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=43.40 E-value=56 Score=29.52 Aligned_cols=50 Identities=12% Similarity=0.095 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 021175 202 AATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 202 ~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 251 (316)
.-++-++.|+...+. ..+....++..+|++|+.+|+|++|++..++++..
T Consensus 178 ~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 178 QVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 344444555554331 23456677888889999999999999999888864
No 313
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=41.91 E-value=1.4e+02 Score=24.12 Aligned_cols=53 Identities=11% Similarity=-0.021 Sum_probs=23.9
Q ss_pred CChHHHHHHHHHHHHhcCC-C---CccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 021175 198 KFYPAATKYLLQAIEKWDG-D---DQDLAQVYNALGVSYV-REGKLDKGISQFETAVK 250 (316)
Q Consensus 198 g~~~~A~~~~~~al~~~~~-~---~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 250 (316)
|+-+.|.+.|++|.+.... + +|-......|.+..|+ -+++.++|.+..++|++
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 4455555555555554321 2 2222233333433333 24555555555555544
No 314
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=40.80 E-value=92 Score=25.72 Aligned_cols=50 Identities=12% Similarity=-0.075 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhcCCCCccH---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 021175 201 PAATKYLLQAIEKWDGDDQDL---AQVYNALGVSYVR-EGKLDKGISQFETAVK 250 (316)
Q Consensus 201 ~~A~~~~~~al~~~~~~~p~~---~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 250 (316)
+.|.+.|++|.+....+.|.+ .....|.+..|+. +|+.++|.+..++|++
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567788888887652244444 3445555665555 7888888888877765
No 315
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=40.06 E-value=48 Score=21.93 Aligned_cols=21 Identities=10% Similarity=0.048 Sum_probs=15.7
Q ss_pred HHHHcCChHHHHHHHHHHHHh
Q 021175 193 VMLRRKFYPAATKYLLQAIEK 213 (316)
Q Consensus 193 ~~~~~g~~~~A~~~~~~al~~ 213 (316)
-.-..|+|++|+.+|..+++.
T Consensus 22 ~~D~~g~y~eAl~~Y~~aie~ 42 (85)
T 2v6x_A 22 DLDTATQYEEAYTAYYNGLDY 42 (85)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHH
Confidence 345678888888888888873
No 316
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=39.64 E-value=72 Score=28.70 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=25.3
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 251 (316)
+....++..+|++|+.+|+|++|.+..++++..
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 455667777888888888888888888888754
No 317
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.43 E-value=22 Score=25.37 Aligned_cols=26 Identities=8% Similarity=0.244 Sum_probs=15.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
+.+.|...-..|+.++|+++|++.++
T Consensus 25 ~Is~AL~~DE~g~k~~Al~lYk~GI~ 50 (116)
T 2dl1_A 25 FVNKGLNTDELGQKEEAKNYYKQGIG 50 (116)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhcCCHHHHHHHHHHHHH
Confidence 45555555566666666666665553
No 318
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=38.61 E-value=26 Score=23.76 Aligned_cols=13 Identities=8% Similarity=0.031 Sum_probs=5.0
Q ss_pred CChHHHHHHHHHH
Q 021175 198 KFYPAATKYLLQA 210 (316)
Q Consensus 198 g~~~~A~~~~~~a 210 (316)
|+-++|+++|++.
T Consensus 33 G~k~~A~~~YkkG 45 (89)
T 3eab_A 33 GQKEQAVEWYKKG 45 (89)
T ss_dssp SSGGGSHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 3333333333333
No 319
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=38.08 E-value=87 Score=28.03 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..++..++.+|..+|++++|.+..++++..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 668889999999999999999999999863
No 320
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=37.33 E-value=1.9e+02 Score=24.49 Aligned_cols=80 Identities=15% Similarity=0.106 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHhCCCcHHHH
Q 021175 183 SATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVRE---GKLDKGISQFETAVKLQPGYVTAW 259 (316)
Q Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~---g~~~~A~~~~~~al~~~p~~~~~~ 259 (316)
+++.|..+|..+.+.|++.+|..+|-.. +.++++.+.++=.-.... |...+ .+.+
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i~~-------~~~s~~~~a~~l~~w~~~~~~~~~~e---------------~dlf 190 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFMLG-------THDSMIKYVDLLWDWLCQVDDIEDST---------------VAEF 190 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHTS-------CHHHHHHHHHHHHHHHHHTTCCCHHH---------------HHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHHhC-------CCccHHHHHHHHHHHHHhcCCCCcch---------------HHHH
Confidence 5778888888888888888888887522 223444443332222222 33222 3333
Q ss_pred HHHHH-HHHHcCCHHHHHHHHHHHHh
Q 021175 260 NNLGD-AYEKKKDLKSALKAFEEVLL 284 (316)
Q Consensus 260 ~~lg~-~~~~~g~~~~A~~~~~~al~ 284 (316)
...+. .|...|+...|...+....+
T Consensus 191 ~~RaVL~yL~l~n~~~A~~~~~~f~~ 216 (312)
T 2wpv_A 191 FSRLVFNYLFISNISFAHESKDIFLE 216 (312)
T ss_dssp HHHHHHHHHHTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 33333 46678888888888776653
No 321
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=36.70 E-value=1.2e+02 Score=24.94 Aligned_cols=50 Identities=10% Similarity=-0.068 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhc----CCCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 021175 201 PAATKYLLQAIEKW----DGDDQDLAQVYNALGVSYVR-EGKLDKGISQFETAVK 250 (316)
Q Consensus 201 ~~A~~~~~~al~~~----~~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 250 (316)
+.|.+.|++|.+.. ++.+|-......|.+..|+. +++.++|.+..++|++
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd 227 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 227 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 55677777776643 22344444455566666555 6888888887777654
No 322
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=36.32 E-value=1.2e+02 Score=24.94 Aligned_cols=50 Identities=10% Similarity=-0.043 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHhcC----CCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 021175 201 PAATKYLLQAIEKWD----GDDQDLAQVYNALGVSYVR-EGKLDKGISQFETAVK 250 (316)
Q Consensus 201 ~~A~~~~~~al~~~~----~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 250 (316)
+.|.+.|++|.+... +.+|-......|.+..|+. +++.++|.+..++|++
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 206 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFD 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 467778888877542 2344444556666666665 7999999998888764
No 323
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=36.09 E-value=1.3e+02 Score=24.63 Aligned_cols=50 Identities=14% Similarity=0.013 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHhcC----CCCccHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 021175 201 PAATKYLLQAIEKWD----GDDQDLAQVYNALGVSYVR-EGKLDKGISQFETAVK 250 (316)
Q Consensus 201 ~~A~~~~~~al~~~~----~~~p~~~~~~~~lg~~~~~-~g~~~~A~~~~~~al~ 250 (316)
+.|.+.|++|.+... +.+|-......|.+..|+. +++.++|.+..++|++
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567777777776432 2344444455666666555 6888888888777664
No 324
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=34.47 E-value=97 Score=27.77 Aligned_cols=30 Identities=23% Similarity=0.151 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..++..+|.+|..+|++++|.+..++++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 678889999999999999999999999863
No 325
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=34.45 E-value=1.4e+02 Score=22.26 Aligned_cols=52 Identities=12% Similarity=0.151 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 021175 201 PAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG 254 (316)
Q Consensus 201 ~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 254 (316)
+++.+.|.-.... ++.-..+..|...|..+...|++++|.+.|+.+++.+..
T Consensus 82 ~dp~~if~~L~~~--~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNH--GIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTT--TTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHC--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 4477777777652 245677888999999999999999999999999997644
No 326
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.43 E-value=1.1e+02 Score=27.48 Aligned_cols=33 Identities=9% Similarity=0.079 Sum_probs=28.5
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 251 (316)
+....++..+|++|+.+|+|++|++..++++..
T Consensus 194 ~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 194 FNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 345678888999999999999999999999865
No 327
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=33.74 E-value=1e+02 Score=28.07 Aligned_cols=33 Identities=12% Similarity=0.111 Sum_probs=25.8
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 251 (316)
+....++..+|.+|+..++|++|++..++++..
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455667777888888888888888888888763
No 328
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=33.02 E-value=59 Score=23.19 Aligned_cols=18 Identities=17% Similarity=0.198 Sum_probs=12.8
Q ss_pred HHcCChHHHHHHHHHHHH
Q 021175 195 LRRKFYPAATKYLLQAIE 212 (316)
Q Consensus 195 ~~~g~~~~A~~~~~~al~ 212 (316)
-..|+|++|+.+|..+++
T Consensus 29 D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 29 DKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHH
Confidence 456777777777777766
No 329
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=32.44 E-value=1.1e+02 Score=27.62 Aligned_cols=30 Identities=13% Similarity=0.009 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..++..+|.+|..+|++++|....++++..
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 568889999999999999999999999865
No 330
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=31.93 E-value=37 Score=30.81 Aligned_cols=20 Identities=20% Similarity=0.140 Sum_probs=10.1
Q ss_pred CCccHHHHHHHHHHHHHHcC
Q 021175 217 DDQDLAQVYNALGVSYVREG 236 (316)
Q Consensus 217 ~~p~~~~~~~~lg~~~~~~g 236 (316)
.+++...-+.+++..|.-.|
T Consensus 469 dd~~~v~~~~~~ak~yE~aG 488 (526)
T 2wb7_A 469 DDYQMFLNYLNAAKKHEMAG 488 (526)
T ss_dssp CSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhhhhcc
Confidence 34555555555554443333
No 331
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=31.61 E-value=2.7e+02 Score=24.84 Aligned_cols=59 Identities=12% Similarity=0.101 Sum_probs=42.4
Q ss_pred HHHHHHHHHHc-----CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCC--CCccHHHHHHH
Q 021175 169 SAKELQEQVRS-----GDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDG--DDQDLAQVYNA 227 (316)
Q Consensus 169 A~~~~~~al~~-----~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~--~~p~~~~~~~~ 227 (316)
+++.|.+++.. +..+..-|..+|-.+++.+++.+|+..+..+-..... ...++.++|..
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKE 363 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKE 363 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 56667776652 3455677888999999999999999999988875443 23455555543
No 332
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=31.40 E-value=1.1e+02 Score=25.36 Aligned_cols=51 Identities=8% Similarity=0.020 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhcCC-C--Ccc---HHHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 021175 201 PAATKYLLQAIEKWDG-D--DQD---LAQVYNALGVSYV-REGKLDKGISQFETAVKL 251 (316)
Q Consensus 201 ~~A~~~~~~al~~~~~-~--~p~---~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~ 251 (316)
+.|.+.|++|.+.... + .|. ......|.+..|+ -+++.++|.+..++|++-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 5566777777654311 2 333 3334455555555 468888888888777764
No 333
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=30.85 E-value=1.1e+02 Score=27.57 Aligned_cols=48 Identities=19% Similarity=0.210 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhCC--------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Q 021175 239 DKGISQFETAVKLQP--------GYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFD 286 (316)
Q Consensus 239 ~~A~~~~~~al~~~p--------~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 286 (316)
+.-++.+++|+..-| +...++..++.+|..+|++++|.+..++++...
T Consensus 177 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 177 EQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 344455555555433 235688899999999999999999999998753
No 334
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=30.06 E-value=1.8e+02 Score=23.50 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhcC----CCCccHHHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 021175 201 PAATKYLLQAIEKWD----GDDQDLAQVYNALGVSYV-REGKLDKGISQFETAVK 250 (316)
Q Consensus 201 ~~A~~~~~~al~~~~----~~~p~~~~~~~~lg~~~~-~~g~~~~A~~~~~~al~ 250 (316)
+.|.+.|++|.+... +.+|-......|.+..|+ -+++.++|.+..++|++
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd 204 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFD 204 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567777877776432 234444455566666655 46888888888777764
No 335
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=29.03 E-value=1.5e+02 Score=20.69 Aligned_cols=51 Identities=4% Similarity=-0.169 Sum_probs=32.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 021175 226 NALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEE 281 (316)
Q Consensus 226 ~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 281 (316)
.-....++++|+|++|....+... .++.--.++.|-.+.|-.+++...+.+
T Consensus 43 lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL~~ 93 (115)
T 2uwj_G 43 LIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAALDRRLAG 93 (115)
T ss_dssp HHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHHHH
Confidence 334556778888888877654322 344445566677778887777777643
No 336
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=28.86 E-value=2.5e+02 Score=28.03 Aligned_cols=156 Identities=10% Similarity=-0.055 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhcCCCCcc-----
Q 021175 149 LGVGTFFVIRQVLVRRELDLSAKELQEQVR---SGDASATEYFELGAVMLRRKFYPAATKYLLQAIEKWDGDDQD----- 220 (316)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~---~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~----- 220 (316)
++.......-.....++.++++..+.+-+. .+......--.+|.-....|..+++.+++...+. +++
T Consensus 373 ~~k~sA~aSLGlIh~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~~~~~lL~~~L~-----~~~~~~~~ 447 (963)
T 4ady_A 373 WAKFTATASLGVIHKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIV-----ENSGTSGD 447 (963)
T ss_dssp HHHHHHHHHHHHHTSSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH-----HHSSCCSC
T ss_pred HHHHHHHHHhhhhccCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHc-----Cccccccc
Q ss_pred --HH----HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH--HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhH
Q 021175 221 --LA----QVYNALGVSYVREGKLDKGISQFETAVKLQPGYVT--AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVA 292 (316)
Q Consensus 221 --~~----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~--~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a 292 (316)
.. .+-..||.++.-.++ +++.+.+...+.-+..... +-+.+|.++...|+-+.....+..+.+-..++..-
T Consensus 448 ~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e~~~e~vrR 526 (963)
T 4ady_A 448 EDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQETQHGNITR 526 (963)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCSCHHHHH
T ss_pred cccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhccCcHHHHH
Q ss_pred HHHHHHHHhhCCCCCCCC
Q 021175 293 RPRRDALKDRVPLYKGVP 310 (316)
Q Consensus 293 ~~~l~~l~~~~~~~~~A~ 310 (316)
...++.-....|+.+.++
T Consensus 527 ~aalgLGll~~g~~e~~~ 544 (963)
T 4ady_A 527 GLAVGLALINYGRQELAD 544 (963)
T ss_dssp HHHHHHHHHTTTCGGGGH
T ss_pred HHHHHHHhhhCCChHHHH
No 337
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=28.71 E-value=1.7e+02 Score=23.60 Aligned_cols=71 Identities=11% Similarity=0.044 Sum_probs=45.1
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHhc------CCCChhHHHHHHHH
Q 021175 235 EGKLDKGISQFETAVKL-----QPGY---VTAWNNLGDAYE-KKKDLKSALKAFEEVLLF------DPNNKVARPRRDAL 299 (316)
Q Consensus 235 ~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~-~~g~~~~A~~~~~~al~~------~p~~~~a~~~l~~l 299 (316)
.|+.+.|.+.|++|.++ .|.+ .....|.+..|+ -+++.++|....++++.. ++++.+-....-.+
T Consensus 138 ~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~~ 217 (227)
T 2o8p_A 138 LCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITVY 217 (227)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 44478888888888764 3444 455666666655 489999999999999664 34444444444444
Q ss_pred HhhCCC
Q 021175 300 KDRVPL 305 (316)
Q Consensus 300 ~~~~~~ 305 (316)
.+.+.|
T Consensus 218 ~q~~~d 223 (227)
T 2o8p_A 218 LQGIKD 223 (227)
T ss_dssp HHHHC-
T ss_pred HHHHHH
Confidence 444433
No 338
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=28.21 E-value=2.3e+02 Score=22.68 Aligned_cols=52 Identities=8% Similarity=0.137 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 021175 201 PAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPG 254 (316)
Q Consensus 201 ~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 254 (316)
+++.+.|.-.... ++.-..+..|...|..+...|++++|.++|+.+++..-.
T Consensus 131 ~~p~~if~~L~~~--~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHH--HIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHT--TCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHC--CcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 5667777777662 245677889999999999999999999999999987643
No 339
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=27.21 E-value=5.4e+02 Score=26.78 Aligned_cols=139 Identities=10% Similarity=0.027 Sum_probs=78.2
Q ss_pred hhHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCh-----------------------HHHH------HHHHHHHHhc
Q 021175 164 RELDLSAKELQEQVRSGDASATEYFELGAVMLRRKFY-----------------------PAAT------KYLLQAIEKW 214 (316)
Q Consensus 164 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~-----------------------~~A~------~~~~~al~~~ 214 (316)
-+.+++.+.|++.++..|++..++..+-..+.....- .++. ..+++.++..
T Consensus 1121 ~~~~~~~~~~~~l~~~~P~~l~~~~~~l~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~a 1200 (1354)
T 3lxu_X 1121 CELEMAEKIYNDVVAAHPKHLQANLLLIQNIESNQLKSQLPLTFVNAQKTSPPEAGESADKQKEDQKKVRSALERIVKLA 1200 (1354)
T ss_dssp SCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHHSSCCCCHHHHHHTTSCCCSSCTTHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHCCccHHHHHHHHHhhhhhhhhcccccccccccccccccccccccccchhhhhHHHHHHHHHHHH
Confidence 3457788999999999999988888777755532210 0111 3344444422
Q ss_pred C--------------------------CCC-------ccHHHHHHHHHHHHHHc----CC----HHHHHHHHHHHHH-hC
Q 021175 215 D--------------------------GDD-------QDLAQVYNALGVSYVRE----GK----LDKGISQFETAVK-LQ 252 (316)
Q Consensus 215 ~--------------------------~~~-------p~~~~~~~~lg~~~~~~----g~----~~~A~~~~~~al~-~~ 252 (316)
+ ++. ..-.+++...|.++.+. .. .++-.+.|.+.++ .+
T Consensus 1201 d~vi~~id~~~l~~~~g~k~d~~~~a~k~k~~m~~~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d 1280 (1354)
T 3lxu_X 1201 DKVIQETDSEALLSYYGLKNDTRADAAKIKTNMDKQKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVD 1280 (1354)
T ss_dssp HHTTCHHHHTTTSTTCCSTHHHHCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSC
T ss_pred HHHHHhcCHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcc
Confidence 1 000 01244555544444332 22 2333333444443 24
Q ss_pred CCcHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCC
Q 021175 253 PGYVTAWNNLGDAY-EKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVP 304 (316)
Q Consensus 253 p~~~~~~~~lg~~~-~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~ 304 (316)
+++..+.. +...+ ...|+|..|++++.+.++-.| ..+.+..+..+...+|
T Consensus 1281 ~~d~k~~~-~~~~~~~~~~~~g~~~k~l~k~~~~k~-~~~~~~~~~~~~~~l~ 1331 (1354)
T 3lxu_X 1281 ANDSKAIQ-FALWHAYAHGHYGRMYKYVVKLIEEKR-TRDHFVELAAINGALG 1331 (1354)
T ss_dssp TTSTTTHH-HHHHHHHHHTCHHHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHS
T ss_pred cCCceeeh-hHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHcC
Confidence 44443322 33333 368999999999999998887 4566666666666554
No 340
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=26.69 E-value=1.5e+02 Score=19.95 Aligned_cols=20 Identities=15% Similarity=0.130 Sum_probs=14.1
Q ss_pred HHHcCChHHHHHHHHHHHHh
Q 021175 194 MLRRKFYPAATKYLLQAIEK 213 (316)
Q Consensus 194 ~~~~g~~~~A~~~~~~al~~ 213 (316)
.-..|+|++|+.+|..+++.
T Consensus 25 ~D~~g~y~eAl~~Y~~Aie~ 44 (93)
T 1wfd_A 25 LDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHH
Confidence 34567788887777777763
No 341
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=26.62 E-value=99 Score=27.91 Aligned_cols=49 Identities=24% Similarity=0.253 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhcCC----CCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 202 AATKYLLQAIEKWDG----DDQDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 202 ~A~~~~~~al~~~~~----~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
.-++-++.|+...+. -.+....++..+|.+|+.++++++|++..++++.
T Consensus 156 ~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 156 QAKEDLKTAASLLPITNKIGKPTQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 334444555554331 2345567788889999999999999999888874
No 342
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=26.24 E-value=1.7e+02 Score=20.44 Aligned_cols=75 Identities=9% Similarity=-0.111 Sum_probs=43.0
Q ss_pred cCChHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH
Q 021175 197 RKFYPAATKYLLQAIEKWDGDDQDLAQVYNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSAL 276 (316)
Q Consensus 197 ~g~~~~A~~~~~~al~~~~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~ 276 (316)
....+||.-..+=.-. .++...+-.-....++++|+|++|....+... .++.--.++.|-.+.|-.+++.
T Consensus 20 ~H~HqEA~tIAdwL~~-----~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le 89 (116)
T 2p58_C 20 NHYHEEANCIAEWLHL-----KGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGSALE 89 (116)
T ss_dssp TTCHHHHHHHHHHHHH-----TTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHHHHH
T ss_pred chHHHHHHHHHHHHHh-----CCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHH
Confidence 3445555544333332 33333333334556788888888887764432 3444445666677788877777
Q ss_pred HHHHH
Q 021175 277 KAFEE 281 (316)
Q Consensus 277 ~~~~~ 281 (316)
..+.+
T Consensus 90 ~rL~~ 94 (116)
T 2p58_C 90 SRLNR 94 (116)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76643
No 343
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=25.45 E-value=1.8e+02 Score=26.51 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=27.0
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 251 (316)
+....++..+|.+|+..+++++|.+..++++..
T Consensus 195 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 195 ACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 445677888889998889999999999888863
No 344
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=25.41 E-value=66 Score=25.80 Aligned_cols=38 Identities=11% Similarity=0.183 Sum_probs=19.7
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH
Q 021175 231 SYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEK 268 (316)
Q Consensus 231 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 268 (316)
++.+.|.|++|.+.+++....+|.+......|..+-.+
T Consensus 123 VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~ 160 (235)
T 3bu8_A 123 ICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIRE 160 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHH
T ss_pred HHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhc
Confidence 34555556666666665555544444444444444333
No 345
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=23.97 E-value=1.7e+02 Score=19.73 Aligned_cols=56 Identities=20% Similarity=0.067 Sum_probs=37.1
Q ss_pred HHHHHHHHcCChHHHHHHHHHHHHhcCCCCccH----HHHHHHH--HHHHHHcCCHHHHHHHHHHHHH
Q 021175 189 ELGAVMLRRKFYPAATKYLLQAIEKWDGDDQDL----AQVYNAL--GVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 189 ~lg~~~~~~g~~~~A~~~~~~al~~~~~~~p~~----~~~~~~l--g~~~~~~g~~~~A~~~~~~al~ 250 (316)
..|..++..|+|=+|-+.++..-.. .|+. .....++ |..+...|+. |...+++++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~----~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLK----ATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhh----CCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4566677788898998888888874 3322 2223333 4445567777 8888888876
No 346
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=29.56 E-value=17 Score=34.78 Aligned_cols=51 Identities=14% Similarity=-0.020 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVKLQPGYVTAWNNLGDAYEKKKDLKSA 275 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 275 (316)
....+...+..|+|.-|.+..+.++..+|++.++...++.+|.++|...+.
T Consensus 464 ~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 464 VLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 344566677889999999999999999999999999999999988865543
No 347
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=23.68 E-value=3.4e+02 Score=23.07 Aligned_cols=27 Identities=22% Similarity=0.333 Sum_probs=22.3
Q ss_pred HHHHcCCHHHHHHHHHHHHhcCCCChh
Q 021175 265 AYEKKKDLKSALKAFEEVLLFDPNNKV 291 (316)
Q Consensus 265 ~~~~~g~~~~A~~~~~~al~~~p~~~~ 291 (316)
..++.++|.-|...-++.+++.|+...
T Consensus 207 ~a~K~KNy~tAa~fArrLLel~p~~~~ 233 (320)
T 3mkr_B 207 LFFKLKNFRTAAAFARRLLELGPKPEV 233 (320)
T ss_dssp HHHHTTBHHHHHHHHHHHHHTCCCHHH
T ss_pred HHHHhhhHHHHHHHHHHHHhcCCCHHH
Confidence 457889999999999999999886443
No 348
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=23.21 E-value=3.5e+02 Score=23.12 Aligned_cols=123 Identities=12% Similarity=0.058 Sum_probs=80.5
Q ss_pred CCHHHHHHHHHHHHHcCChHHHHHHHHH-------HH-Hh----cCCCCccHHHHHHHHHH-HHHHcCCHHHHHHHHHHH
Q 021175 182 ASATEYFELGAVMLRRKFYPAATKYLLQ-------AI-EK----WDGDDQDLAQVYNALGV-SYVREGKLDKGISQFETA 248 (316)
Q Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~-------al-~~----~~~~~p~~~~~~~~lg~-~~~~~g~~~~A~~~~~~a 248 (316)
.+++.+..+|..+.+.+++.+|..+|-- .+ +. .....|.....+...+. .|...++...|.+.++.-
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~~f 213 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYRIF 213 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 6789999999999999999999988731 11 10 01134566666666665 467889999998866554
Q ss_pred HH----hCC------------------CcHHHH-HHHHHHHHHcCC---HHHHHHHHHHHHhcCC-CChhHHHHHHHHHh
Q 021175 249 VK----LQP------------------GYVTAW-NNLGDAYEKKKD---LKSALKAFEEVLLFDP-NNKVARPRRDALKD 301 (316)
Q Consensus 249 l~----~~p------------------~~~~~~-~~lg~~~~~~g~---~~~A~~~~~~al~~~p-~~~~a~~~l~~l~~ 301 (316)
.+ .+| ..+... ..+-..-.+.+. +..-.+.|+..++.+| ...+....+++++-
T Consensus 214 ~~~l~~~~p~L~~q~~~~~~~~~~~~p~~PLLNFl~lLllt~q~~~~~lF~~L~~~Y~~~l~rd~~~~~~~L~~IG~~YF 293 (336)
T 3lpz_A 214 TSALVEDNKGLTVQNIGSQSAELRIFPSLPLLNFISMLLLSVQKGSPDLFRQLKSKYEANLNELNGIWDTALELIAEMYF 293 (336)
T ss_dssp HHHHHHHCTTSCCEESCC--CCCEECTTCHHHHHHHHHHHHHHSCCHHHHHHHHHHTHHHHHTTTTTTHHHHHHHHHHHH
T ss_pred HHHHhhcCCCccccccccCCcccccCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHc
Confidence 43 233 233211 122223344553 4556678888888888 77888888888887
Q ss_pred hCC
Q 021175 302 RVP 304 (316)
Q Consensus 302 ~~~ 304 (316)
.+.
T Consensus 294 gi~ 296 (336)
T 3lpz_A 294 GIQ 296 (336)
T ss_dssp CCC
T ss_pred CCC
Confidence 664
No 349
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=22.52 E-value=1.8e+02 Score=19.56 Aligned_cols=27 Identities=22% Similarity=0.305 Sum_probs=14.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 021175 225 YNALGVSYVREGKLDKGISQFETAVKL 251 (316)
Q Consensus 225 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 251 (316)
...-|.-+++.++|.+|...|+++...
T Consensus 56 ~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 56 LIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 333444455556666666666555543
No 350
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=22.46 E-value=2.2e+02 Score=25.83 Aligned_cols=30 Identities=17% Similarity=0.107 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 021175 256 VTAWNNLGDAYEKKKDLKSALKAFEEVLLF 285 (316)
Q Consensus 256 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 285 (316)
..++..++.+|...+++++|....++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568889999999999999999999999864
No 351
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=22.00 E-value=19 Score=29.77 Aligned_cols=25 Identities=16% Similarity=0.228 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCChHHHHHHHHHHHH
Q 021175 188 FELGAVMLRRKFYPAATKYLLQAIE 212 (316)
Q Consensus 188 ~~lg~~~~~~g~~~~A~~~~~~al~ 212 (316)
...|.-+-..|+|++|..+|+.+++
T Consensus 27 v~~AVe~D~~g~y~eAl~lY~eaIe 51 (257)
T 2ymb_A 27 LKRAVELDSESRYPQALVCYQEGID 51 (257)
T ss_dssp -------------------------
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3334445555566666666655555
No 352
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=21.92 E-value=1.4e+02 Score=20.74 Aligned_cols=32 Identities=16% Similarity=-0.019 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
..++.....-+.-..+.|+|++|.+.+++|-+
T Consensus 17 aG~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~ 48 (105)
T 2e2a_A 17 AGDARSKLLEALKAAENGDFAKADSLVVEAGS 48 (105)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44555555556667788899888888887754
No 353
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=21.58 E-value=1.5e+02 Score=20.58 Aligned_cols=32 Identities=6% Similarity=0.127 Sum_probs=21.8
Q ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 021175 219 QDLAQVYNALGVSYVREGKLDKGISQFETAVK 250 (316)
Q Consensus 219 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 250 (316)
..++.....-+.-..+.|+|++|.+.++++-+
T Consensus 15 aG~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~ 46 (103)
T 1wcr_A 15 SGQARSLAYAALKQAKQGDFAAAKAMMDQSRM 46 (103)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34455555555557788888888888877754
No 354
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=20.11 E-value=1.3e+02 Score=21.98 Aligned_cols=14 Identities=29% Similarity=0.133 Sum_probs=6.6
Q ss_pred ChHHHHHHHHHHHH
Q 021175 199 FYPAATKYLLQAIE 212 (316)
Q Consensus 199 ~~~~A~~~~~~al~ 212 (316)
+.+++..++++|..
T Consensus 5 ~~ee~~~wl~~A~~ 18 (141)
T 3o10_A 5 NPVEARRWLRQARA 18 (141)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHh
Confidence 44444444444443
No 355
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=25.39 E-value=22 Score=33.93 Aligned_cols=49 Identities=22% Similarity=0.156 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhHHHHHHHHHhhCCCC
Q 021175 258 AWNNLGDAYEKKKDLKSALKAFEEVLLFDPNNKVARPRRDALKDRVPLY 306 (316)
Q Consensus 258 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l~~l~~~~~~~ 306 (316)
.....+...+..|++..|.+..+.++..+|++.+++..++..+.++|..
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 4455667777899999999999999999999999999999999988865
Done!