Query 021176
Match_columns 316
No_of_seqs 210 out of 1459
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 08:11:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021176.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021176hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02693 IAA-amino acid hydrol 100.0 8.3E-50 1.8E-54 379.5 36.2 280 34-315 26-305 (437)
2 PLN02280 IAA-amino acid hydrol 100.0 3.5E-49 7.6E-54 377.7 36.6 264 53-316 95-358 (478)
3 TIGR01891 amidohydrolases amid 100.0 2.5E-45 5.4E-50 342.5 30.7 258 58-315 2-261 (363)
4 PRK06915 acetylornithine deace 100.0 1.3E-44 2.8E-49 344.2 31.4 265 39-315 3-305 (422)
5 PRK08588 succinyl-diaminopimel 100.0 3.8E-44 8.2E-49 336.1 29.2 252 55-315 2-267 (377)
6 COG1473 AbgB Metal-dependent a 100.0 1.1E-43 2.4E-48 328.6 30.9 262 55-316 12-276 (392)
7 PRK13013 succinyl-diaminopimel 100.0 7.8E-43 1.7E-47 332.4 29.8 262 43-315 4-312 (427)
8 PRK06837 acetylornithine deace 100.0 2.6E-42 5.7E-47 328.6 31.1 264 40-315 7-310 (427)
9 PRK13004 peptidase; Reviewed 100.0 3.8E-42 8.1E-47 324.9 31.5 262 42-315 4-277 (399)
10 PRK06133 glutamate carboxypept 100.0 8.1E-42 1.8E-46 323.5 31.7 260 41-315 25-298 (410)
11 PRK07338 hypothetical protein; 100.0 6.2E-42 1.3E-46 323.8 30.9 260 40-315 4-291 (402)
12 TIGR03526 selenium_YgeY putati 100.0 6.5E-42 1.4E-46 322.9 30.4 261 43-315 3-275 (395)
13 PRK08596 acetylornithine deace 100.0 8E-42 1.7E-46 324.7 30.5 260 43-315 3-296 (421)
14 TIGR03320 ygeY M20/DapE family 100.0 1.2E-41 2.5E-46 321.1 29.8 261 43-315 3-275 (395)
15 TIGR01910 DapE-ArgE acetylorni 100.0 3.6E-42 7.8E-47 322.6 24.8 250 59-315 2-276 (375)
16 PRK08201 hypothetical protein; 100.0 1.4E-41 2.9E-46 326.3 29.0 269 42-315 3-345 (456)
17 TIGR01892 AcOrn-deacetyl acety 100.0 1.6E-41 3.5E-46 316.7 28.1 245 59-315 1-266 (364)
18 PRK05111 acetylornithine deace 100.0 2.8E-41 6E-46 317.4 28.4 248 55-315 5-279 (383)
19 PRK06446 hypothetical protein; 100.0 1.1E-41 2.5E-46 324.9 25.8 257 55-315 2-326 (436)
20 PRK13009 succinyl-diaminopimel 100.0 4.1E-41 8.8E-46 315.4 29.0 256 56-315 3-273 (375)
21 PRK07522 acetylornithine deace 100.0 2.7E-41 5.8E-46 317.7 27.6 250 55-315 4-276 (385)
22 TIGR01880 Ac-peptdase-euk N-ac 100.0 5.4E-41 1.2E-45 317.2 28.6 257 55-315 9-291 (400)
23 PRK13983 diaminopimelate amino 100.0 4.4E-41 9.5E-46 317.6 27.9 256 55-315 5-294 (400)
24 TIGR01900 dapE-gram_pos succin 100.0 4.9E-41 1.1E-45 314.3 27.5 247 60-314 1-274 (373)
25 TIGR01246 dapE_proteo succinyl 100.0 5.7E-41 1.2E-45 313.9 27.5 254 58-315 2-270 (370)
26 PRK07907 hypothetical protein; 100.0 1.6E-40 3.5E-45 318.2 30.4 266 41-315 6-337 (449)
27 PRK09133 hypothetical protein; 100.0 1.2E-40 2.6E-45 321.0 28.0 255 55-315 37-362 (472)
28 PRK09104 hypothetical protein; 100.0 2.8E-40 6E-45 317.8 29.8 270 41-315 5-353 (464)
29 PRK13007 succinyl-diaminopimel 100.0 1.8E-39 3.9E-44 301.7 28.8 244 55-315 7-261 (352)
30 PRK08262 hypothetical protein; 100.0 8.1E-40 1.7E-44 316.3 26.1 256 55-315 44-375 (486)
31 PRK07473 carboxypeptidase; Pro 100.0 6E-39 1.3E-43 300.5 29.9 247 55-315 11-272 (376)
32 PRK07906 hypothetical protein; 100.0 1.3E-39 2.8E-44 310.1 25.5 255 58-315 2-319 (426)
33 PRK08651 succinyl-diaminopimel 100.0 4.9E-39 1.1E-43 303.2 27.9 248 55-315 6-284 (394)
34 PRK04443 acetyl-lysine deacety 100.0 1.3E-38 2.9E-43 295.5 27.4 238 55-315 6-250 (348)
35 PRK08737 acetylornithine deace 100.0 1.4E-38 3E-43 296.6 27.3 237 55-315 6-263 (364)
36 PRK00466 acetyl-lysine deacety 100.0 1.7E-38 3.6E-43 294.7 26.9 232 55-315 10-245 (346)
37 PRK08652 acetylornithine deace 100.0 1.8E-38 4E-43 294.3 25.8 238 55-315 2-245 (347)
38 PRK07079 hypothetical protein; 100.0 3.7E-38 8.1E-43 303.4 28.7 266 41-315 7-348 (469)
39 TIGR01886 dipeptidase dipeptid 100.0 1.5E-37 3.2E-42 298.4 29.3 257 44-315 4-365 (466)
40 PRK07205 hypothetical protein; 100.0 2.4E-37 5.2E-42 295.9 27.9 254 55-315 11-342 (444)
41 KOG2276 Metalloexopeptidases [ 100.0 7.7E-38 1.7E-42 279.5 20.9 270 41-315 4-359 (473)
42 COG0624 ArgE Acetylornithine d 100.0 1.1E-36 2.3E-41 288.7 29.4 258 55-315 13-300 (409)
43 TIGR01883 PepT-like peptidase 100.0 1.5E-36 3.3E-41 283.0 25.8 242 57-315 2-259 (361)
44 PRK07318 dipeptidase PepV; Rev 100.0 2.1E-36 4.6E-41 290.9 27.0 260 44-315 5-365 (466)
45 PRK06156 hypothetical protein; 100.0 1.4E-35 3E-40 288.3 29.7 291 7-315 5-410 (520)
46 TIGR01902 dapE-lys-deAc N-acet 100.0 1.8E-35 3.9E-40 273.3 25.7 231 60-315 2-236 (336)
47 PRK13381 peptidase T; Provisio 100.0 3.4E-35 7.3E-40 277.9 27.2 243 57-315 3-295 (404)
48 KOG2275 Aminoacylase ACY1 and 100.0 5.4E-35 1.2E-39 263.7 26.4 255 55-313 25-306 (420)
49 PRK05469 peptidase T; Provisio 100.0 1.8E-34 4E-39 273.3 26.1 245 55-315 2-297 (408)
50 TIGR01887 dipeptidaselike dipe 100.0 1.1E-33 2.4E-38 269.9 28.6 251 55-314 2-351 (447)
51 PRK12892 allantoate amidohydro 100.0 5.8E-34 1.3E-38 270.2 26.4 241 55-315 10-306 (412)
52 PRK12893 allantoate amidohydro 100.0 1.2E-33 2.7E-38 268.0 26.0 241 55-315 10-305 (412)
53 PRK15026 aminoacyl-histidine d 100.0 1.9E-33 4.1E-38 270.0 27.4 240 55-314 10-284 (485)
54 PRK09290 allantoate amidohydro 100.0 2.9E-33 6.4E-38 265.4 25.0 241 55-315 7-306 (413)
55 TIGR01882 peptidase-T peptidas 100.0 1.5E-33 3.2E-38 267.0 22.9 246 55-315 3-299 (410)
56 TIGR01893 aa-his-dipept aminoa 100.0 6.1E-32 1.3E-36 260.6 27.5 243 55-314 4-278 (477)
57 PRK12891 allantoate amidohydro 100.0 7.4E-32 1.6E-36 255.8 26.8 226 70-315 35-305 (414)
58 PRK12890 allantoate amidohydro 100.0 1.6E-31 3.5E-36 253.7 28.0 232 64-315 27-307 (414)
59 TIGR01879 hydantase amidase, h 100.0 1.9E-30 4E-35 245.3 26.3 227 69-315 25-298 (401)
60 PRK08554 peptidase; Reviewed 100.0 1.8E-29 3.9E-34 240.6 24.8 253 56-315 2-334 (438)
61 TIGR03176 AllC allantoate amid 100.0 5.4E-29 1.2E-33 235.3 26.9 241 55-315 3-299 (406)
62 PRK13799 unknown domain/N-carb 100.0 5.3E-28 1.1E-32 237.7 28.4 242 55-314 181-483 (591)
63 PRK13590 putative bifunctional 100.0 2.3E-28 5E-33 240.4 24.6 240 55-315 181-482 (591)
64 COG4187 RocB Arginine degradat 99.8 1.4E-18 3.1E-23 157.6 16.6 256 55-314 8-319 (553)
65 PF07687 M20_dimer: Peptidase 99.7 3.6E-17 7.8E-22 126.6 10.8 96 220-315 2-102 (111)
66 PRK10199 alkaline phosphatase 99.7 5.5E-16 1.2E-20 141.0 17.5 130 57-191 37-189 (346)
67 PF01546 Peptidase_M20: Peptid 99.6 4.3E-15 9.2E-20 125.6 9.3 76 114-191 1-85 (189)
68 TIGR03106 trio_M42_hydro hydro 99.5 1.3E-13 2.9E-18 126.9 15.4 129 55-184 3-223 (343)
69 COG2195 PepD Di- and tripeptid 99.5 5.4E-14 1.2E-18 131.1 11.4 246 55-314 5-303 (414)
70 PRK09961 exoaminopeptidase; Pr 99.4 1.1E-11 2.5E-16 114.4 16.7 141 59-205 4-223 (344)
71 COG1363 FrvX Cellulase M and r 99.4 2.2E-11 4.7E-16 111.3 15.3 145 55-205 2-237 (355)
72 TIGR03107 glu_aminopep glutamy 99.3 5.3E-11 1.1E-15 109.8 16.4 142 59-206 2-236 (350)
73 PRK09864 putative peptidase; P 99.3 9.2E-11 2E-15 108.1 16.5 140 58-206 3-231 (356)
74 KOG2194 Aminopeptidases of the 98.5 1.6E-06 3.4E-11 86.5 11.7 133 56-203 58-224 (834)
75 PF04389 Peptidase_M28: Peptid 98.4 1.1E-06 2.3E-11 73.7 7.7 82 112-204 2-89 (179)
76 PF05343 Peptidase_M42: M42 gl 98.1 2.6E-05 5.5E-10 70.6 10.6 63 137-204 125-190 (292)
77 KOG3946 Glutaminyl cyclase [Po 97.4 0.0054 1.2E-07 54.0 13.9 108 72-190 69-200 (338)
78 KOG2526 Predicted aminopeptida 97.1 0.0073 1.6E-07 56.1 11.1 115 79-204 165-305 (555)
79 COG2234 Iap Predicted aminopep 96.9 0.0038 8.2E-08 59.8 8.5 44 147-192 231-275 (435)
80 KOG2195 Transferrin receptor a 96.2 0.015 3.2E-07 58.5 7.7 78 98-191 338-421 (702)
81 PRK00913 multifunctional amino 95.8 0.24 5.3E-06 47.9 13.6 129 47-179 163-309 (483)
82 cd00433 Peptidase_M17 Cytosol 95.2 0.74 1.6E-05 44.6 14.6 123 53-179 152-295 (468)
83 PF05450 Nicastrin: Nicastrin; 94.8 0.13 2.7E-06 45.1 7.4 66 111-189 1-73 (234)
84 PF00883 Peptidase_M17: Cytoso 94.5 0.53 1.2E-05 42.8 11.0 110 58-179 1-140 (311)
85 PTZ00412 leucyl aminopeptidase 94.0 1.7 3.6E-05 42.6 13.8 129 48-179 205-354 (569)
86 PRK05015 aminopeptidase B; Pro 93.0 3.9 8.4E-05 38.8 14.1 126 45-179 93-246 (424)
87 KOG2597 Predicted aminopeptida 92.8 1.9 4E-05 41.7 11.9 123 55-179 189-330 (513)
88 TIGR01893 aa-his-dipept aminoa 90.0 0.53 1.1E-05 45.8 5.3 41 269-315 335-375 (477)
89 COG0260 PepB Leucyl aminopepti 87.4 23 0.0005 34.5 14.3 121 54-179 166-308 (485)
90 PRK02256 putative aminopeptida 73.6 6.5 0.00014 38.1 5.3 44 138-185 252-298 (462)
91 PF07436 Curto_V3: Curtovirus 72.8 13 0.00027 26.1 5.1 60 4-70 1-60 (87)
92 PF08139 LPAM_1: Prokaryotic m 68.9 4.4 9.5E-05 22.1 1.7 18 7-24 7-24 (25)
93 PRK10866 outer membrane biogen 62.1 28 0.00061 30.5 6.6 65 4-71 1-65 (243)
94 PF03032 Brevenin: Brevenin/es 60.4 6.8 0.00015 24.9 1.7 18 7-24 3-20 (46)
95 KOG3566 Glycosylphosphatidylin 59.4 1.6E+02 0.0034 29.4 11.4 90 79-190 92-193 (617)
96 PRK15026 aminoacyl-histidine d 55.3 20 0.00044 35.0 4.9 38 272-315 344-381 (485)
97 COG4882 Predicted aminopeptida 53.9 29 0.00063 32.3 5.3 72 99-191 179-260 (486)
98 PF04114 Gaa1: Gaa1-like, GPI 52.4 2.3E+02 0.005 27.9 11.6 73 98-191 3-78 (504)
99 PHA02291 hypothetical protein 50.9 3.9 8.5E-05 30.6 -0.6 27 5-33 1-27 (132)
100 PF07172 GRP: Glycine rich pro 48.8 6.3 0.00014 29.3 0.2 15 5-19 1-15 (95)
101 PRK14864 putative biofilm stre 47.8 37 0.00081 25.7 4.2 22 72-93 60-81 (104)
102 PRK13883 conjugal transfer pro 43.2 1.3E+02 0.0028 24.4 6.9 19 76-94 64-82 (151)
103 PRK02813 putative aminopeptida 40.3 37 0.00081 32.6 4.1 43 139-186 227-275 (428)
104 PF09940 DUF2172: Domain of un 39.5 1.1E+02 0.0024 28.8 6.7 67 102-190 119-187 (386)
105 PTZ00371 aspartyl aminopeptida 34.0 72 0.0016 31.0 4.9 47 139-185 244-294 (465)
106 PF06675 DUF1177: Protein of u 33.2 62 0.0013 28.5 3.8 84 110-204 31-130 (276)
107 COG4635 HemG Flavodoxin [Energ 32.9 38 0.00081 27.8 2.3 33 64-96 4-36 (175)
108 PF13956 Ibs_toxin: Toxin Ibs, 31.7 29 0.00063 17.3 0.9 9 13-21 7-15 (19)
109 COG2195 PepD Di- and tripeptid 30.7 72 0.0016 30.5 4.3 68 111-185 62-139 (414)
110 PF03668 ATP_bind_2: P-loop AT 26.7 1E+02 0.0022 27.9 4.2 31 272-303 160-190 (284)
111 COG1333 ResB ResB protein requ 25.5 1.5E+02 0.0032 28.8 5.2 34 73-107 110-143 (478)
112 PRK13835 conjugal transfer pro 23.6 3.9E+02 0.0085 21.5 7.0 20 75-94 68-87 (145)
113 COG1698 Uncharacterized protei 22.9 1.6E+02 0.0035 21.5 3.9 39 54-92 15-53 (93)
114 PF09716 ETRAMP: Malarial earl 21.8 1.3E+02 0.0027 21.7 3.2 13 5-17 1-13 (84)
115 PRK06156 hypothetical protein; 20.6 93 0.002 30.6 3.1 25 272-296 239-263 (520)
116 PRK04330 hypothetical protein; 20.5 2.4E+02 0.0052 20.6 4.4 38 54-91 11-48 (88)
117 PRK05416 glmZ(sRNA)-inactivati 20.3 1.3E+02 0.0029 27.1 3.9 30 273-303 164-193 (288)
No 1
>PLN02693 IAA-amino acid hydrolase
Probab=100.00 E-value=8.3e-50 Score=379.48 Aligned_cols=280 Identities=70% Similarity=1.147 Sum_probs=246.1
Q ss_pred CCCCCchhHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEE
Q 021176 34 SNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFV 113 (316)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i 113 (316)
+.+-++.+..+.+...+.+..+++++++++|+++|++|++|.++++||+++|+++|++++...+++|++|.++++++|+|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lh~~PE~s~~E~~ta~~i~~~L~~~G~~~~~~~~~~~via~~g~~~g~~i 105 (437)
T PLN02693 26 AGDVSQIQINLLELAKSPEVFDWMVRIRRKIHENPELGYEEFETSKLIRSELDLIGIKYRYPVAITGIIGYIGTGEPPFV 105 (437)
T ss_pred ccchhhhHHHHHHHhhhhhhHHHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHCCCeeEecCCCcEEEEEECCCCCCEE
Confidence 34444677777777666223378999999999999999999999999999999999998754467899999965556899
Q ss_pred EEEeecCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHHcccc
Q 021176 114 ALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVL 193 (316)
Q Consensus 114 ~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~ 193 (316)
+|.||+||||+++..+|++++..+|++||||+|+++|++++|+++|++.+..++++|+|+|++|||++.|++.+++++.+
T Consensus 106 ~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~~~Ga~~~i~~g~~ 185 (437)
T PLN02693 106 ALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGAL 185 (437)
T ss_pred EEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccchhhHHHHHHCCCC
Confidence 99999999999888889999988999999999999999999999999887778899999999999976899999999987
Q ss_pred ccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCce
Q 021176 194 EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQV 273 (316)
Q Consensus 194 ~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t 273 (316)
++.|+++++|.++..+.|.+..+.|..++|..+++|+++|+++|++.|+.|.||+..+++++..|+++..+..++....+
T Consensus 186 ~~~~~iig~h~~p~~~~g~~~~~~g~~~~G~~~~~i~v~Gk~aHaa~P~~G~nAI~~aa~~i~~l~~~~~~~~~~~~~~t 265 (437)
T PLN02693 186 KNVEAIFGIHLSPRTPFGKAASRAGSFMAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKV 265 (437)
T ss_pred CCCCEEEEEecCCCCCCeeEEeccCcccccceEEEEEEEcccccCCCCCCCcCHHHHHHHHHHHHHHHhcccCCCCCCcE
Confidence 77889999998887778877777777788999999999999999999999999999999999999998655545566789
Q ss_pred EEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 274 VTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 274 ~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|++.|+||.+.|+||++|++.+|+|+.|.. +.+.++|++
T Consensus 266 i~vg~i~GG~~~NvVPd~a~~~~diR~~~~~--~~i~~~i~~ 305 (437)
T PLN02693 266 VTVSKVNGGNAFNVIPDSITIGGTLRAFTGF--TQLQQRIKE 305 (437)
T ss_pred EEEEEEEcCCCCceECCeEEEEEEEecCCHH--HHHHHHHHH
Confidence 9999999999999999999999999999974 577777765
No 2
>PLN02280 IAA-amino acid hydrolase
Probab=100.00 E-value=3.5e-49 Score=377.67 Aligned_cols=264 Identities=62% Similarity=1.051 Sum_probs=239.2
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcc
Q 021176 53 LVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEY 132 (316)
Q Consensus 53 ~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~ 132 (316)
+.+.+.++.++++++|+++++|.++++|++++|+++|+++++...+.|++++++++++|+|+|+||+||||+++..+|++
T Consensus 95 ~~~~l~~l~r~lh~~PEls~~E~~t~~~i~~~L~~~G~~~~~~~~~~~vva~~g~~~~~~I~l~gh~DaVP~~e~~~w~~ 174 (478)
T PLN02280 95 TVAWLKSVRRKIHENPELAFEEYKTSELVRSELDRMGIMYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEAVEWEH 174 (478)
T ss_pred HHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCeEEecCCCCEEEEEECCCCCCEEEEEEecCCCcccCCCCCCC
Confidence 34788889999999999999999999999999999999988766678999999544458999999999999988888999
Q ss_pred cCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHHccccccccEEEEeccCCCCCcce
Q 021176 133 KSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGE 212 (316)
Q Consensus 133 ~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~ 212 (316)
+++++|++||||+|++++++++++++|++.+.+++++|.|+|++|||.+.|++++++++.++++|+++++|+.+..|++.
T Consensus 175 ~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g~Ga~~li~~g~~~~~d~~~~~h~~~~~p~g~ 254 (478)
T PLN02280 175 KSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAGNGAKRMIGDGALDDVEAIFAVHVSHEHPTAV 254 (478)
T ss_pred CCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEecccccccchHHHHHHCCCCcCCCEEEEEecCCCCCCce
Confidence 99999999999999999999999999998887889999999999999657999999999888889999999876678887
Q ss_pred eEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeE
Q 021176 213 VASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSV 292 (316)
Q Consensus 213 ~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a 292 (316)
+..+.+...+|..+++|+++|+++|++.|+.|.||+..+++++..++++..+..++....++|++.|+||.+.|+||++|
T Consensus 255 ig~~~~~~~~G~~~~~I~v~Gk~aHas~P~~G~NAI~~aa~li~~l~~l~~r~~~~~~~~tvnvg~I~GG~~~NvIPd~~ 334 (478)
T PLN02280 255 IGSRPGPLLAGCGFFRAVISGKKGRAGSPHHSVDLILAASAAVISLQGIVSREANPLDSQVVSVTTMDGGNNLDMIPDTV 334 (478)
T ss_pred eEecccccccceeEEEEEEECcchhcCCcccCcCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEEEccCCCCEeCCEE
Confidence 77777777789999999999999999999999999999999999999886554455566899999999999999999999
Q ss_pred EEEEEEeccChhcHHHHHHHHhhC
Q 021176 293 LIGGTFRAFSKESFTQLKQRIEEV 316 (316)
Q Consensus 293 ~~~~d~R~~p~~~~~~v~~~l~~~ 316 (316)
++.+|+|++|..+.+++.++|+++
T Consensus 335 ~l~~diR~~~~e~~e~l~~~I~~~ 358 (478)
T PLN02280 335 VLGGTFRAFSNTSFYQLLKRIQEV 358 (478)
T ss_pred EEEEEEecCCHHHHHHHHHHHHHH
Confidence 999999999999999999998763
No 3
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=100.00 E-value=2.5e-45 Score=342.50 Aligned_cols=258 Identities=51% Similarity=0.836 Sum_probs=224.6
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEe-ccCCceEEEEEcCC-CCcEEEEEeecCCCCCcccCCCcccCC
Q 021176 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKH-PVAVTGVVGFIGTG-EPPFVALRADMDSLPLQEMVEWEYKSK 135 (316)
Q Consensus 58 ~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~-~~~~~~via~~~~~-~~~~i~l~~H~Dvvp~~~~~~w~~~~~ 135 (316)
.+++++|++|||+|++|.++++||+++|+++|+++++ .....|++++++++ ++|+|+|+||+||||+++...+||...
T Consensus 2 ~~~~~~L~~ips~s~~E~~~a~~l~~~l~~~g~~~~~~~~~~~~vva~~~~~~~~~~i~l~gH~DtVp~~~~~~~pf~~~ 81 (363)
T TIGR01891 2 TDIRRHLHEHPELSFEEFKTSSLIAEALESLGIEVRRGVGGATGVVATIGGGKPGPVVALRADMDALPIQEQTDLPYKST 81 (363)
T ss_pred hHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEecCCCCcEEEEEEeCCCCCCEEEEEeccCCCCcccccCCCcccC
Confidence 4689999999999999999999999999999999876 34568899999654 458999999999999876555678766
Q ss_pred CCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHHccccccccEEEEeccCCCCCcceeEe
Q 021176 136 IPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVAS 215 (316)
Q Consensus 136 ~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~ 215 (316)
+||++||||+|++++++++|++.|++.+..++++|.|+|++|||.+.|++++++++.++++|++++.++++..+.+.+..
T Consensus 82 ~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~~~ 161 (363)
T TIGR01891 82 NPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGGGGATKMIEDGVLDDVDAILGLHPDPSIPAGTVGL 161 (363)
T ss_pred CCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCcchHHHHHHCCCCCCcCEEEEECCCCCCCCeEEEE
Confidence 78999999999999999999999998777788999999999999668999999888777788888877766666666655
Q ss_pred ecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEE
Q 021176 216 RPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIG 295 (316)
Q Consensus 216 ~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~ 295 (316)
..+..++|..+++++++|+++|++.|+.|.||+..|++++.+++++..+..+....+++|++.|+||.+.|+||++|++.
T Consensus 162 ~~~~~~~g~~~~~i~~~G~~~Has~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~i~~i~gG~~~nvvP~~~~~~ 241 (363)
T TIGR01891 162 RPGTIMAAADKFEVTIHGKGAHAARPHLGRDALDAAAQLVVALQQIVSRNVDPSRPAVVTVGIIEAGGAPNVIPDKASMS 241 (363)
T ss_pred CCCcceeecceEEEEEEeecccccCcccccCHHHHHHHHHHHHHHHhhccCCCCCCcEEEEEEEEcCCCCcEECCeeEEE
Confidence 66677889999999999999999999999999999999999998864332233345789999999999999999999999
Q ss_pred EEEeccChhcHHHHHHHHhh
Q 021176 296 GTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 296 ~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|+|++|..+.+++.++|++
T Consensus 242 ~diR~~~~~~~e~~~~~i~~ 261 (363)
T TIGR01891 242 GTVRSLDPEVRDQIIDRIER 261 (363)
T ss_pred EEEEeCCHHHHHHHHHHHHH
Confidence 99999999999999998875
No 4
>PRK06915 acetylornithine deacetylase; Validated
Probab=100.00 E-value=1.3e-44 Score=344.17 Aligned_cols=265 Identities=23% Similarity=0.360 Sum_probs=225.2
Q ss_pred chhHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec--------------------cCC
Q 021176 39 DIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--------------------VAV 98 (316)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~ 98 (316)
+..+++++++++++ +++++++++|++|||+|++|.++++||+++|+++|+++++. +++
T Consensus 3 ~~~~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (422)
T PRK06915 3 QLKKQICDYIESHE--EEAVKLLKRLIQEKSVSGDESGAQAIVIEKLRELGLDLDIWEPSFKKLKDHPYFVSPRTSFSDS 80 (422)
T ss_pred HHHHHHHHHHHhhH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHhcCCeeEEeecchhhhhcccccCCcccccCCC
Confidence 45788999999988 89999999999999999999999999999999999997631 246
Q ss_pred ceEEEEEcC-CCCcEEEEEeecCCCCCcccCCCc---ccC-CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceE
Q 021176 99 TGVVGFIGT-GEPPFVALRADMDSLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTV 170 (316)
Q Consensus 99 ~~via~~~~-~~~~~i~l~~H~Dvvp~~~~~~w~---~~~-~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i 170 (316)
+|+++++++ +++|+|+|+|||||||+++.+.|+ |.. ++||++||||+ ||+++++|.|+++|++.+.+++++|
T Consensus 81 ~nlia~~~g~~~~~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v 160 (422)
T PRK06915 81 PNIVATLKGSGGGKSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDV 160 (422)
T ss_pred ceEEEEEcCCCCCCeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 899999954 346899999999999999888895 443 46899999997 8999999999999999888889999
Q ss_pred EEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHH
Q 021176 171 VLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPIL 249 (316)
Q Consensus 171 ~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~ 249 (316)
.|+|++||| |+.|+..++.++. ..|+++. . +|++. ....+++|..+++++++|+++|+|.|+.|.||+.
T Consensus 161 ~~~~~~dEE~g~~G~~~~~~~~~--~~d~~i~--~---ep~~~---~i~~~~~G~~~~~i~v~G~~~H~s~p~~g~nAi~ 230 (422)
T PRK06915 161 IFQSVIEEESGGAGTLAAILRGY--KADGAII--P---EPTNM---KFFPKQQGSMWFRLHVKGKAAHGGTRYEGVSAIE 230 (422)
T ss_pred EEEEecccccCCcchHHHHhcCc--CCCEEEE--C---CCCCc---cceeecccEEEEEEEEEeeccccCCCCcCcCHHH
Confidence 999999999 7789888888764 4677775 2 23332 1234578999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc----cCCCC-----CCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 250 AASNVIVSLQHLVSR----EADPL-----DSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 250 ~~~~~i~~l~~~~~~----~~~~~-----~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.+++++..|+++..+ ...+. ...++|++.|+||...|+||++|++.+|+|+.|+++.+++.++|++
T Consensus 231 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~a~~~~d~R~~p~~~~~~v~~~i~~ 305 (422)
T PRK06915 231 KSMFVIDHLRKLEEKRNDRITDPLYKGIPIPIPINIGKIEGGSWPSSVPDSVILEGRCGIAPNETIEAAKEEFEN 305 (422)
T ss_pred HHHHHHHHHHHHHHHhccccCCCcccCCCCCceEeEEEeeCCCCCCccCcEEEEEEEEEECCCCCHHHHHHHHHH
Confidence 999999999887532 11121 1358999999999999999999999999999999999999888764
No 5
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=3.8e-44 Score=336.15 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=217.0
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec---cCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCc
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE 131 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~ 131 (316)
++.++++++|++|||+|++|.++++||+++|+++|++++.. ++++|+++++++++ |+|+|++|+||||+++.+.|.
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~g~~~-~~il~~~H~DtVp~~~~~~w~ 80 (377)
T PRK08588 2 EEKIQILADIVKINSVNDNEIEVANYLQDLFAKHGIESKIVKVNDGRANLVAEIGSGS-PVLALSGHMDVVAAGDVDKWT 80 (377)
T ss_pred hHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHCCCceEEEecCCCCceEEEEeCCCC-ceEEEEeeecccCCCCcccCc
Confidence 57889999999999999999999999999999999998752 35689999996544 899999999999998878895
Q ss_pred cc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEec
Q 021176 132 YK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLH 203 (316)
Q Consensus 132 ~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~ 203 (316)
++ ..+||++||||+ |++++++|.|+++|++.+..++++|.|+|++||| |+.|++++++++.++++|++++.+
T Consensus 81 ~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~~dEE~g~~G~~~~~~~~~~~~~d~~i~~e 160 (377)
T PRK08588 81 YDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLATAGEEVGELGAKQLTEKGYADDLDALIIGE 160 (377)
T ss_pred CCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEEcccccCchhHHHHHhcCccCCCCEEEEec
Confidence 43 357899999997 8999999999999999888889999999999999 678999999998777788777532
Q ss_pred cCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc---CCCCCCceEEEEEEE
Q 021176 204 VDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE---ADPLDSQVVTVAKFQ 280 (316)
Q Consensus 204 ~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~---~~~~~~~t~~i~~i~ 280 (316)
+.. ..+. .+++|..+++|+++|+++|+|.|+.|.||+..+++++..++++..+. .+.+..+++|++.|+
T Consensus 161 --p~~--~~i~----~~~~G~~~~~i~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~t~~v~~i~ 232 (377)
T PRK08588 161 --PSG--HGIV----YAHKGSMDYKVTSTGKAAHSSMPELGVNAIDPLLEFYNEQKEYFDSIKKHNPYLGGLTHVVTIIN 232 (377)
T ss_pred --CCC--ceeE----EEEEEEEEEEEEEEeechhccCCccccCHHHHHHHHHHHHHHHhhhhcccCccCCCCceeeeEEe
Confidence 221 1111 24579999999999999999999999999999999999998764332 123456899999999
Q ss_pred cCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 281 gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
||...|+||++|++++|+|+.|+++.+++.+++++
T Consensus 233 gG~~~nvip~~~~~~~d~R~~p~~~~~~v~~~i~~ 267 (377)
T PRK08588 233 GGEQVNSVPDEAELEFNIRTIPEYDNDQVISLLQE 267 (377)
T ss_pred CCCcCCcCCCeEEEEEEeccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999998875
No 6
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=100.00 E-value=1.1e-43 Score=328.65 Aligned_cols=262 Identities=51% Similarity=0.856 Sum_probs=245.5
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccC-CceEEEEEcCC-CCcEEEEEeecCCCCCcccCCCcc
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVA-VTGVVGFIGTG-EPPFVALRADMDSLPLQEMVEWEY 132 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~-~~~via~~~~~-~~~~i~l~~H~Dvvp~~~~~~w~~ 132 (316)
++++++.|+|+++|+.+++|.++++|++++|+++|+++....+ +++++|.++++ ++|+|+|.+.||.+|..+..++||
T Consensus 12 ~~l~~~rr~lH~~PEL~f~E~~Ta~~i~~~L~~~g~~~~~~~~~~TGvva~~~~g~~g~tIalRAD~DALPi~E~t~~~~ 91 (392)
T COG1473 12 DELIEWRRDLHEHPELGFEEYRTAAYIAEKLEELGFEVVEVGGGKTGVVATLKGGKPGPTIALRADMDALPIQEETGLPF 91 (392)
T ss_pred HHHHHHHHHHhhCCccchhHHHHHHHHHHHHHHcCCeeEeccCCceEEEEEEcCCCCCCEEEEEeecccCccccccCCCc
Confidence 8899999999999999999999999999999999999443333 68999999754 568999999999999999999999
Q ss_pred cCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHHcccccc-ccEEEEeccCCCCCcc
Q 021176 133 KSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEK-VNAIFGLHVDPNLPIG 211 (316)
Q Consensus 133 ~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~-~d~~~~~~~~~~~~~g 211 (316)
.++.+|++|+||++++.+++|.++++|++...+++++|+|+|++.||++.|++.|+++|.+++ +|+++++|+.++.|.|
T Consensus 92 ~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~Ga~~mi~~G~~~~~vD~v~g~H~~p~~~~g 171 (392)
T COG1473 92 ASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGGGAKAMIEDGVFDDFVDAVFGLHPGPGLPVG 171 (392)
T ss_pred ccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccccHHHHHhcCCccccccEEEEecCCCCCCCc
Confidence 999999999999999999999999999998778999999999999997768999999998898 9999999998877899
Q ss_pred eeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCe
Q 021176 212 EVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDS 291 (316)
Q Consensus 212 ~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~ 291 (316)
++..+.|....+...++++++|+++|++.|+.++||+.+++.++..|+.+.+|..++....+++++.++||.+.|+||+.
T Consensus 172 ~v~~~~G~~~aa~d~~~i~~~GkggH~a~Ph~~~d~i~aa~~~v~~lq~ivsr~~~p~~~~vv~vg~~~aG~a~NVIpd~ 251 (392)
T COG1473 172 TVALRPGALMAAADEFEITFKGKGGHAAAPHLGIDALVAAAQLVTALQTIVSRNVDPLDSAVVTVGKIEAGTAANVIPDS 251 (392)
T ss_pred eEEeecccceeecceEEEEEEeCCcccCCcccccCHHHHHHHHHHHHHHHHhcccCCccCeEEEEEEecCCCcCCcCCCe
Confidence 99989988888899999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred EEEEEEEeccChhcHHHHHHHHhhC
Q 021176 292 VLIGGTFRAFSKESFTQLKQRIEEV 316 (316)
Q Consensus 292 a~~~~d~R~~p~~~~~~v~~~l~~~ 316 (316)
+++..++|.......+.+.++++++
T Consensus 252 A~l~gtvR~~~~~~~~~~~~~i~~i 276 (392)
T COG1473 252 AELEGTIRTFSDEVREKLEARIERI 276 (392)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHH
Confidence 9999999999999999999998864
No 7
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=7.8e-43 Score=332.41 Aligned_cols=262 Identities=16% Similarity=0.232 Sum_probs=214.6
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhcCCCCC---cchHHHHHHHHHHHHhcCCceEecc-----C------CceEEEEEcC-
Q 021176 43 KLLNFAKRQELVGWMIGIRRKIHQNPELG---YQEFETSQLIRSELDKMGIKYKHPV-----A------VTGVVGFIGT- 107 (316)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~-----~------~~~via~~~~- 107 (316)
++.+++++++ +++++++++|++|||++ .+|.++++||+++|+++|++++... + ++|+++++++
T Consensus 4 ~~~~~~~~~~--~~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~nlia~~~g~ 81 (427)
T PRK13013 4 RLFAAIEARR--DDLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGAPGDSETYPRWNLVARRQGA 81 (427)
T ss_pred HHHHHHHHhH--HHHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCCCcccccCCcceEEEEecCC
Confidence 5778888888 89999999999999987 3568999999999999999987532 1 4699999954
Q ss_pred CCCcEEEEEeecCCCCCcccCCCc---cc-CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-
Q 021176 108 GEPPFVALRADMDSLPLQEMVEWE---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE- 179 (316)
Q Consensus 108 ~~~~~i~l~~H~Dvvp~~~~~~w~---~~-~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE- 179 (316)
+++|+|+|+||+||||+++ .|. |. ..+||++||||+ |++++++|+|+++|++.+.+++++|.|+|++|||
T Consensus 82 ~~~~~i~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~ 159 (427)
T PRK13013 82 RDGDCVHFNSHHDVVEVGH--GWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISGTADEES 159 (427)
T ss_pred CCCCEEEEEeccccCCCCC--CCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEEEecccc
Confidence 3458999999999999874 574 54 356899999997 8999999999999999887889999999999999
Q ss_pred Cc-ccHHHHHHccccc--cccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHH
Q 021176 180 GG-GGAHKVLEAGVLE--KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIV 256 (316)
Q Consensus 180 g~-~G~~~~~~~~~~~--~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~ 256 (316)
|+ .|..++++++.++ .+|+++.. + |++... ...+++|..+++++++|+++|++.|+.|.||+..++++|.
T Consensus 160 g~~~g~~~l~~~~~~~~~~~d~~i~~--e---p~~~~~--i~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~l~ 232 (427)
T PRK13013 160 GGFGGVAYLAEQGRFSPDRVQHVIIP--E---PLNKDR--ICLGHRGVWWAEVETRGRIAHGSMPFLGDSAIRHMGAVLA 232 (427)
T ss_pred CChhHHHHHHhcCCccccCCCEEEEe--c---CCCCCc--eEEeeeeEEEEEEEEEccccccCCCCcCcCHHHHHHHHHH
Confidence 55 4777888877655 45777753 2 222111 1234679999999999999999999999999999999999
Q ss_pred HHHHhhhc-----cC------CCCCCceEEEEEEEcCCcC----------ceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 257 SLQHLVSR-----EA------DPLDSQVVTVAKFQGGGAF----------NVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 257 ~l~~~~~~-----~~------~~~~~~t~~i~~i~gg~~~----------nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.|++...+ .. +....+++|++.|+||... |+||++|++++|+|++|+++.+++.++|++
T Consensus 233 ~l~~~~~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~~~~~~~~~~~n~IPd~a~~~idiR~~p~~~~~~v~~~i~~ 312 (427)
T PRK13013 233 EIEERLFPLLATRRTAMPVVPEGARQSTLNINSIHGGEPEQDPDYTGLPAPCVADRCRIVIDRRFLIEEDLDEVKAEITA 312 (427)
T ss_pred HHHHHhhhhhhcccccCCCCCcccCCCceeeeEEeCCCccccccccccccccCCceEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 99765311 00 0123579999999999766 999999999999999999999999998875
No 8
>PRK06837 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.6e-42 Score=328.59 Aligned_cols=264 Identities=18% Similarity=0.211 Sum_probs=222.8
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec--------------------cCCc
Q 021176 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--------------------VAVT 99 (316)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--------------------~~~~ 99 (316)
..+++.+++++.. +++++++++|++|||+|++|.++++||+++|+++|+++++. ++++
T Consensus 7 ~~~~~~~~i~~~~--~~~~~~l~~li~ipS~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
T PRK06837 7 LTQRILAAVDAGF--DAQVAFTQDLVRFPSTRGAEAPCQDFLARAFRERGYEVDRWSIDPDDLKSHPGAGPVEIDYSGAP 84 (427)
T ss_pred HHHHHHHHHHhhh--HHHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHCCCceEEecCCHHHhhhcccccccccccCCCc
Confidence 5677899999988 99999999999999999999999999999999999987641 2468
Q ss_pred eEEEEEcC-CC-CcEEEEEeecCCCCCcccCCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceE
Q 021176 100 GVVGFIGT-GE-PPFVALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTV 170 (316)
Q Consensus 100 ~via~~~~-~~-~~~i~l~~H~Dvvp~~~~~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i 170 (316)
||++++++ ++ +|+|+|+||+||||+++.+.|..+ ..+||++||||+ ||+++++|.|++++++.+..++++|
T Consensus 85 nl~a~~~g~~~~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i 164 (427)
T PRK06837 85 NVVGTYRPAGKTGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARV 164 (427)
T ss_pred eEEEEecCCCCCCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcE
Confidence 99999954 33 589999999999999887788544 247899999998 8999999999999999888889999
Q ss_pred EEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHH
Q 021176 171 VLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPIL 249 (316)
Q Consensus 171 ~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~ 249 (316)
.|+|+++|| ++.|+..++..++ ..|++++. + |++. ....+++|..+++++++|+++|+|.|+.|.||+.
T Consensus 165 ~~~~~~dEE~~g~g~~~~~~~~~--~~d~~iv~--e---p~~~---~i~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~ 234 (427)
T PRK06837 165 HFQSVIEEESTGNGALSTLQRGY--RADACLIP--E---PTGE---KLVRAQVGVIWFRLRVRGAPVHVREAGTGANAID 234 (427)
T ss_pred EEEEEeccccCCHhHHHHHhcCc--CCCEEEEc--C---CCCC---ccccccceeEEEEEEEEeeccccCCcccCcCHHH
Confidence 999999999 7788888887764 46777652 2 2322 1223467999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcc-----CC-----CCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 250 AASNVIVSLQHLVSRE-----AD-----PLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 250 ~~~~~i~~l~~~~~~~-----~~-----~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.+++++..|+++.... .. .....++|++.|+||...|+||++|++.+++|+.|+++++++.++|++
T Consensus 235 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~t~ni~~i~gG~~~nvVP~~~~~~~~ir~~p~~~~~~v~~~i~~ 310 (427)
T PRK06837 235 AAYHLIQALRELEAEWNARKASDPHFEDVPHPINFNVGIIKGGDWASSVPAWCDLDCRIAIYPGVTAADAQAEIEA 310 (427)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcccCCCCceeEeeeeEeCCCCCCccCCEEEEEEEEeECCCCCHHHHHHHHHH
Confidence 9999999998764211 00 112458999999999999999999999999999999999999988875
No 9
>PRK13004 peptidase; Reviewed
Probab=100.00 E-value=3.8e-42 Score=324.90 Aligned_cols=262 Identities=20% Similarity=0.268 Sum_probs=220.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCC
Q 021176 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDS 121 (316)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dv 121 (316)
+++.+++++++ +++++++++|++|||+|++|.++++||.++|+++||++...+..+|+++.+++++ |+|+|++|+||
T Consensus 4 ~~~~~~~~~~~--~~~~~~l~~lv~ips~s~~e~~~a~~l~~~l~~~G~~~~~~~~~~n~~a~~~~~~-~~i~~~~H~Dt 80 (399)
T PRK13004 4 KLILMLAEKYK--ADMTRFLRDLIRIPSESGDEKRVVKRIKEEMEKVGFDKVEIDPMGNVLGYIGHGK-KLIAFDAHIDT 80 (399)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCcEEEEcCCCeEEEEECCCC-cEEEEEeccCc
Confidence 56788899888 9999999999999999999999999999999999998654455679999986654 89999999999
Q ss_pred CCCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHHHHHHccc
Q 021176 122 LPLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGV 192 (316)
Q Consensus 122 vp~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~G~~~~~~~~~ 192 (316)
||+++.++|.+++ .+||++||||+ |++++++|+|+++|++.+..++++|.|+|++||| + +.|++.++++..
T Consensus 81 Vp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~g~~~~~~~~~~~ 160 (399)
T PRK13004 81 VGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGTVQEEDCDGLCWRYIIEEDK 160 (399)
T ss_pred cCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEEcccccCcchhHHHHHHhcC
Confidence 9998777897653 46899999998 8999999999999999888889999999999999 3 467788887643
Q ss_pred cccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc--cCCCCC
Q 021176 193 LEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR--EADPLD 270 (316)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~--~~~~~~ 270 (316)
+ .+|++++.+ +.. ..+ ..+++|..+++++++|+++|++.|+.|.||+..+++++..|+.+... ......
T Consensus 161 ~-~~d~~i~~e--~~~--~~i----~~~~~G~~~~~v~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 231 (399)
T PRK13004 161 I-KPDFVVITE--PTD--LNI----YRGQRGRMEIRVETKGVSCHGSAPERGDNAIYKMAPILNELEELNPNLKEDPFLG 231 (399)
T ss_pred C-CCCEEEEcc--CCC--Cce----EEecceEEEEEEEEeccccccCCCCCCCCHHHHHHHHHHHHHhhccccccCCcCC
Confidence 3 467777643 221 122 23467999999999999999999999999999999999999887533 222234
Q ss_pred CceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 271 SQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 271 ~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
..+++++.|.+| .+.|+||++|++.+|+|++|.++++++.+++++
T Consensus 232 ~~~~~v~~i~~g~~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~ 277 (399)
T PRK13004 232 KGTLTVSDIFSTSPSRCAVPDSCAISIDRRLTVGETWESVLAEIRA 277 (399)
T ss_pred CceEEEeeeecCCCCCCccCCEEEEEEEEcCCCCCCHHHHHHHHHH
Confidence 568999999876 489999999999999999999999999998875
No 10
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=100.00 E-value=8.1e-42 Score=323.53 Aligned_cols=260 Identities=20% Similarity=0.264 Sum_probs=220.1
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcch---HHHHHHHHHHHHhcCCceEecc----CCceEEEEEcCCCCcEE
Q 021176 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE---FETSQLIRSELDKMGIKYKHPV----AVTGVVGFIGTGEPPFV 113 (316)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~----~~~~via~~~~~~~~~i 113 (316)
.+++.+++++++ +++++++++|++|||+++++ .++++||+++|+++|+++++.. .++|+++++++.++|+|
T Consensus 25 ~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~~~~~~~lia~~~g~~~~~i 102 (410)
T PRK06133 25 DAELLAAAQQEQ--PAYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTPPSAGDMVVATFKGTGKRRI 102 (410)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccCCCCCCeEEEEECCCCCceE
Confidence 466899999998 99999999999999999765 4899999999999999987532 35799999965445899
Q ss_pred EEEeecCCCCCcccCCCcccC--CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHH
Q 021176 114 ALRADMDSLPLQEMVEWEYKS--KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKV 187 (316)
Q Consensus 114 ~l~~H~Dvvp~~~~~~w~~~~--~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~ 187 (316)
+|+||+||||++. .|.+++ .++|++||||+ |++++++|+|++.|++.+..++++|.|+|+++|| ++.|++.+
T Consensus 103 ll~~H~D~Vp~~~--~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~ 180 (410)
T PRK06133 103 MLIAHMDTVYLPG--MLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNPDEETGSPGSREL 180 (410)
T ss_pred EEEeecCccCCCC--ccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCcccCCccHHHH
Confidence 9999999999853 475432 56899999996 8999999999999999887788999999999999 66899999
Q ss_pred HHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccC
Q 021176 188 LEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREA 266 (316)
Q Consensus 188 ~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~g~Nai~~~~~~i~~l~~~~~~~~ 266 (316)
+++.. .+.|++++.+ ++.+.+.+.. +++|..+++++++|+++|+| .|+.|.||+..+++++..|+++..
T Consensus 181 ~~~~~-~~~d~~i~~e--p~~~~~~v~~----~~~G~~~~~v~v~G~~~Hsg~~p~~g~nAi~~~~~~i~~l~~~~~--- 250 (410)
T PRK06133 181 IAELA-AQHDVVFSCE--PGRAKDALTL----ATSGIATALLEVKGKASHAGAAPELGRNALYELAHQLLQLRDLGD--- 250 (410)
T ss_pred HHHHh-ccCCEEEEeC--CCCCCCCEEE----eccceEEEEEEEEeeccccCCCcccCcCHHHHHHHHHHHHHhccC---
Confidence 97643 3578888754 3333233332 35799999999999999986 899999999999999999988642
Q ss_pred CCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 267 DPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 267 ~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.....+++++.|+||.+.|+||++|++.+|+|++|.++++++.+++++
T Consensus 251 -~~~~~t~~~~~i~gG~~~nvIP~~~~~~~diR~~~~~~~~~v~~~i~~ 298 (410)
T PRK06133 251 -PAKGTTLNWTVAKAGTNRNVIPASASAQADVRYLDPAEFDRLEADLQE 298 (410)
T ss_pred -CCCCeEEEeeEEECCCCCceeCCccEEEEEEEECCHHHHHHHHHHHHH
Confidence 233468999999999999999999999999999999999999999875
No 11
>PRK07338 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-42 Score=323.77 Aligned_cols=260 Identities=20% Similarity=0.268 Sum_probs=216.7
Q ss_pred hhHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcch---HHHHHHHHHHHHhcCCceEecc-----------------CCc
Q 021176 40 IPKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE---FETSQLIRSELDKMGIKYKHPV-----------------AVT 99 (316)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----------------~~~ 99 (316)
..+++++++++++ ++++++|++|++|||++.++ .++++||+++|+++|++++..+ ..+
T Consensus 4 ~~~~~~~~~~~~~--~~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (402)
T PRK07338 4 EERAVLDLIDDRQ--APMLEQLIAWAAINSGSRNLDGLARMAELLADAFAALPGEIELIPLPPVEVIDADGRTLEQAHGP 81 (402)
T ss_pred HHHHHHHHHhhhH--HHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHhCCCcEEEecCCccccccccccccccCcCC
Confidence 4556788888887 99999999999999998764 5799999999999999887421 125
Q ss_pred eEEEEEcCCCCcEEEEEeecCCCCCcccCCCcccC---CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 021176 100 GVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKS---KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLV 173 (316)
Q Consensus 100 ~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~---~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~ 173 (316)
|++++++++.+++|+|+||+||||++. .||.. ++||++||||+ ||+++++|+|+++|++.+..++++|.|+
T Consensus 82 nl~a~~~~~~~~~lll~gH~DvVp~~~---~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~ 158 (402)
T PRK07338 82 ALHVSVRPEAPRQVLLTGHMDTVFPAD---HPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVL 158 (402)
T ss_pred eEEEEECCCCCccEEEEeecCccCCCC---CcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEE
Confidence 899999654346899999999999853 56753 57899999997 8999999999999998887788999999
Q ss_pred EecCCC-CcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CCCCCCCHHHHH
Q 021176 174 FQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAA 251 (316)
Q Consensus 174 ~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~g~Nai~~~ 251 (316)
|++||| |+.|++.+++++. .+.++++.. +++.+.+.+. .+++|..+++++++|+++|++ .|+.|.||+..+
T Consensus 159 ~~~dEE~g~~g~~~~~~~~~-~~~~~~i~~--ep~~~~~~v~----~~~kG~~~~~v~v~G~~aHs~~~p~~g~nAi~~~ 231 (402)
T PRK07338 159 INPDEEIGSPASAPLLAELA-RGKHAALTY--EPALPDGTLA----GARKGSGNFTIVVTGRAAHAGRAFDEGRNAIVAA 231 (402)
T ss_pred EECCcccCChhhHHHHHHHh-ccCcEEEEe--cCCCCCCcEE----eecceeEEEEEEEEeEcccCCCCcccCccHHHHH
Confidence 999999 6789999988754 345666654 3333334432 235799999999999999999 499999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 252 SNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 252 ~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
++++..|+++..+ ....++|++.|+||.+.|+||++|++.+|+|+.|.++++++.++|++
T Consensus 232 ~~~i~~l~~l~~~----~~~~t~~vg~i~gG~~~nvVP~~a~~~~d~R~~~~~~~~~v~~~i~~ 291 (402)
T PRK07338 232 AELALALHALNGQ----RDGVTVNVAKIDGGGPLNVVPDNAVLRFNIRPPTPEDAAWAEAELKK 291 (402)
T ss_pred HHHHHHHHhhhcc----CCCcEEEEEEEecCCCCceeccccEEEEEeccCCHHHHHHHHHHHHH
Confidence 9999999887432 23469999999999999999999999999999999999999999875
No 12
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=100.00 E-value=6.5e-42 Score=322.87 Aligned_cols=261 Identities=20% Similarity=0.269 Sum_probs=217.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCC
Q 021176 43 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSL 122 (316)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvv 122 (316)
++.+++++++ +++++++++|++|||++++|.++++||+++|+++|+++...+...|+++.++.+ +|+|+|+||+|||
T Consensus 3 ~~~~~~~~~~--~~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~v~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03526 3 QIKSEAEKYR--GDMIRFLRDLVAIPSESGDEGRVALRIKQEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCceEEEcCCCcEEEEeCCC-CCEEEEEeecccc
Confidence 5678888887 899999999999999999999999999999999999853333457899998543 3899999999999
Q ss_pred CCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC--cccHHHHHHcccc
Q 021176 123 PLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG--GGGAHKVLEAGVL 193 (316)
Q Consensus 123 p~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg--~~G~~~~~~~~~~ 193 (316)
|+++.+.|.+++ .+||++||||+ |++++++|+|++.|++.+..++.++.|+++++||+ +.|+..++++..+
T Consensus 80 p~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03526 80 GIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDKI 159 (395)
T ss_pred CCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEecccccCCcHhHHHHHhccCC
Confidence 998888897654 46899999996 99999999999999998877788999999999993 4566777765543
Q ss_pred ccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-CCC-CCC
Q 021176 194 EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADP-LDS 271 (316)
Q Consensus 194 ~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~-~~~-~~~ 271 (316)
.+|++++. ++.. ..+ ..+++|..+++++++|+++|++.|+.|.||+..+++++..|+++.... .++ ...
T Consensus 160 -~~d~~i~~--ep~~--~~i----~~g~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03526 160 -KPEFVVIT--EPTD--MNI----YRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEec--CCCC--ceE----EEEcceEEEEEEEEecCCCccCCCCCCCCHHHHHHHHHHHHHHhhhhhcCCcccCc
Confidence 46777763 2221 122 234679999999999999999999999999999999999998875321 122 345
Q ss_pred ceEEEEEEEcCC-cCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 272 QVVTVAKFQGGG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 272 ~t~~i~~i~gg~-~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.++|++.|++|. +.|+||++|++++|+|++|+++.+++.++|++
T Consensus 231 ~~~~v~~i~~g~~~~nviP~~~~~~~d~R~~~~~~~~~~~~~i~~ 275 (395)
T TIGR03526 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRN 275 (395)
T ss_pred cceeeeeeecCCCCCCccCCeEEEEEEEecCCCCCHHHHHHHHHH
Confidence 799999999875 89999999999999999999999999998875
No 13
>PRK08596 acetylornithine deacetylase; Validated
Probab=100.00 E-value=8e-42 Score=324.69 Aligned_cols=260 Identities=20% Similarity=0.186 Sum_probs=215.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhcCCCCC---cchHHHHHHHHHHHHhcCCceEec---cCCceEEEEEcCC-C--CcEE
Q 021176 43 KLLNFAKRQELVGWMIGIRRKIHQNPELG---YQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTG-E--PPFV 113 (316)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~-~--~~~i 113 (316)
+++++++... +++++++++|++|||++ .+|.++++||+++|+++|+++++. ++++|+++++++. + +|+|
T Consensus 3 ~~~~~i~~~~--~~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~nvia~~~g~~~~~~~~l 80 (421)
T PRK08596 3 QLLEQIELRK--DELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVYPNDPNVVGVKKGTESDAYKSL 80 (421)
T ss_pred HHHHHHHhhH--HHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEccCCCceEEEEecCCCCCCCcEE
Confidence 4677888777 89999999999999998 378889999999999999998752 4578999999542 2 3689
Q ss_pred EEEeecCCCCCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHH
Q 021176 114 ALRADMDSLPLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAH 185 (316)
Q Consensus 114 ~l~~H~Dvvp~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~ 185 (316)
+|+||+||||+++.++|++++ .+||++||||+ |++++++|+|+++|++.+..++++|.|+|++||| |+.|++
T Consensus 81 ll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~G~~ 160 (421)
T PRK08596 81 IINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIFQSVIGEEVGEAGTL 160 (421)
T ss_pred EEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEEEEEeccccCCcCHH
Confidence 999999999998877896542 56899999998 8999999999999999988899999999999999 778999
Q ss_pred HHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEec----------CCCCCCCCCCCCHHHHHHHHH
Q 021176 186 KVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGK----------GGHAAIPQHSIDPILAASNVI 255 (316)
Q Consensus 186 ~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~----------~~Hs~~p~~g~Nai~~~~~~i 255 (316)
++++++. ..|++++. +++... ..+++|..++.++++|. .+|++.|+.|.||+..+++++
T Consensus 161 ~~~~~~~--~~d~~i~~--ep~~~~-------~~~~~G~~~~~~~v~g~~~~~~~~~~~~~H~~~p~~G~nai~~~~~~i 229 (421)
T PRK08596 161 QCCERGY--DADFAVVV--DTSDLH-------MQGQGGVITGWITVKSPQTFHDGTRRQMIHAGGGLFGASAIEKMMKII 229 (421)
T ss_pred HHHhcCC--CCCEEEEC--CCCCCc-------cccccceeeEEEEEEeecccccccccccccccCCccCcCHHHHHHHHH
Confidence 9998864 35777763 332211 12356877777777765 479999999999999999999
Q ss_pred HHHHHhhhc-----cCC--CCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 256 VSLQHLVSR-----EAD--PLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 256 ~~l~~~~~~-----~~~--~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
..|+++... ... ....+++|++.|+||...|+||++|++.+|+|++|+++++++.++|++
T Consensus 230 ~~l~~~~~~~~~~~~~~~~~~~~~t~~v~~i~gG~~~nvvP~~~~~~~d~R~~p~~~~~~v~~~i~~ 296 (421)
T PRK08596 230 QSLQELERHWAVMKSYPGFPPGTNTINPAVIEGGRHAAFIADECRLWITVHFYPNETYEQVIKEIEE 296 (421)
T ss_pred HHHHHHHHHHhhcccCccCCCCCcceeeeeeeCCCCCCccCceEEEEEEeeeCCCCCHHHHHHHHHH
Confidence 999876421 111 123479999999999999999999999999999999999999998875
No 14
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=100.00 E-value=1.2e-41 Score=321.15 Aligned_cols=261 Identities=19% Similarity=0.260 Sum_probs=215.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCC
Q 021176 43 KLLNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSL 122 (316)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvv 122 (316)
++.+++++++ +++++++++|++|||++++|.++++||+++|+++|+++...+...|+++.++.+ +|+|+|+||+|||
T Consensus 3 ~~~~~i~~~~--~~~~~~~~~lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~n~~~~~g~~-~~~l~l~~H~DtV 79 (395)
T TIGR03320 3 QIKSEAKKYR--GDMIRFLRDLVAIPSESGDEKRVAERIKEEMEKLGFDKVEIDPMGNVLGYIGHG-PKLIAMDAHIDTV 79 (395)
T ss_pred hHHHHHHHHH--HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCcEEEECCCCCEEEEeCCC-CcEEEEEeccccc
Confidence 5678888887 899999999999999999999999999999999999743333457899998543 4899999999999
Q ss_pred CCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc--ccHHHHHHcccc
Q 021176 123 PLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG--GGAHKVLEAGVL 193 (316)
Q Consensus 123 p~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~--~G~~~~~~~~~~ 193 (316)
|+++..+|.+++ ++||++||||+ |++++++|+|+++|++.+..++.+|.|++++|||.+ .+.+.++++..+
T Consensus 80 p~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~~dEE~~~g~~~~~~~~~~~~ 159 (395)
T TIGR03320 80 GIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGTVQEEDCDGLCWQYIIEEDGI 159 (395)
T ss_pred CCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEecccccccCchHHHHHHHhcCC
Confidence 998888896653 46899999997 999999999999999988778889999999999943 344566654333
Q ss_pred ccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-CCC-CCC
Q 021176 194 EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADP-LDS 271 (316)
Q Consensus 194 ~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~-~~~-~~~ 271 (316)
.+|++++. +++. ..+ ..+++|..+++++++|+++|+|.|+.|.||+..+++++..|+++.... .++ ...
T Consensus 160 -~~d~~iv~--ep~~--~~i----~~g~~G~~~~~v~~~G~~~Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 230 (395)
T TIGR03320 160 -KPEFVVIT--EPTD--MNI----YRGQRGRMEIKVTVKGVSCHGSAPERGDNAIYKMAPILKELSQLNANLVEDPFLGK 230 (395)
T ss_pred -CCCEEEEc--CCCc--cce----EEecceEEEEEEEEeeeccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCcccCc
Confidence 46777763 2221 122 234679999999999999999999999999999999999998875322 122 345
Q ss_pred ceEEEEEEEcCC-cCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 272 QVVTVAKFQGGG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 272 ~t~~i~~i~gg~-~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.++|++.|++|. +.|+||++|++.+|+|++|+++.+++.++|++
T Consensus 231 ~t~~v~~i~~g~~~~NviP~~~~~~~diR~~p~~~~~~i~~~i~~ 275 (395)
T TIGR03320 231 GTLTVSEIFFSSPSRCAVADGCTISIDRRLTWGETWEYALEQIRN 275 (395)
T ss_pred CceeeeeeecCCCCcCccCCEEEEEEEEecCCCCCHHHHHHHHHH
Confidence 699999999875 89999999999999999999999999999875
No 15
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=100.00 E-value=3.6e-42 Score=322.57 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=208.0
Q ss_pred HHHHHhhcCCC---CCcchHHHHHHHHHHHHhcCCceEecc---CCce----EEEEEcC-CCCcEEEEEeecCCCCCccc
Q 021176 59 GIRRKIHQNPE---LGYQEFETSQLIRSELDKMGIKYKHPV---AVTG----VVGFIGT-GEPPFVALRADMDSLPLQEM 127 (316)
Q Consensus 59 ~~~~~l~~ips---~s~~e~~~~~~l~~~l~~~G~~~~~~~---~~~~----via~~~~-~~~~~i~l~~H~Dvvp~~~~ 127 (316)
+++++|++||| ++++|.++++||+++|+++|++++... +..| +++.+.+ +++|+|+|++||||||+++.
T Consensus 2 ~~l~~lv~i~s~~~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ill~~H~DtVp~~~~ 81 (375)
T TIGR01910 2 ELLKDLISIPSVNPPGGNEETIANYIKDLLREFGFSTDVIEITDDRLKVLGKVVVKEPGNGNEKSLIFNGHYDVVPAGDL 81 (375)
T ss_pred hhHHhhhcCCCCCCCCcCHHHHHHHHHHHHHHCCCceEEEecCchhcccccceEEeccCCCCCCEEEEecccccccCCCh
Confidence 57899999999 778999999999999999999987521 2233 5555543 34589999999999999877
Q ss_pred CCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEE
Q 021176 128 VEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAI 199 (316)
Q Consensus 128 ~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~ 199 (316)
++|.+++ .++|++||||+ |++++++|+|++.|++.+..++++|.|+|+++|| ++.|++.+++++.++++|++
T Consensus 82 ~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~~~d~~ 161 (375)
T TIGR01910 82 ELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGYFKDADGV 161 (375)
T ss_pred hhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCCCCCCCEE
Confidence 8895542 56899999997 8999999999999999887889999999999999 77899999998776667887
Q ss_pred EEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC------CCCCCce
Q 021176 200 FGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA------DPLDSQV 273 (316)
Q Consensus 200 ~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~------~~~~~~t 273 (316)
++. +++. .+.+. .+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..... .....++
T Consensus 162 i~~--~~~~-~~~v~----~~~~G~~~~~i~~~G~~~Hs~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~t 234 (375)
T TIGR01910 162 LIP--EPSG-GDNIV----IGHKGSIWFKLRVKGKQAHASFPQFGVNAIMKLAKLITELNELEEHIYARNSYGFIPGPIT 234 (375)
T ss_pred EEC--CCCC-CCceE----EEecceEEEEEEEeeeecccCCCCcchhHHHHHHHHHHHHHHHHHHhhhcccccccCCCcc
Confidence 763 3221 12222 345799999999999999999999999999999999999987743211 1234689
Q ss_pred EEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 274 VTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 274 ~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|++.|+||...|+||++|++.+|+|+.|.++++++.++|++
T Consensus 235 ~~i~~i~gG~~~nviP~~~~~~~diR~~~~~~~~~~~~~i~~ 276 (375)
T TIGR01910 235 FNPGVIKGGDWVNSVPDYCEFSIDVRIIPEENLDEVKQIIED 276 (375)
T ss_pred ccceeEECCCCcCcCCCEEEEEEEeeeCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999876
No 16
>PRK08201 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=326.33 Aligned_cols=269 Identities=17% Similarity=0.171 Sum_probs=212.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhcCCCCCc------chHHHHHHHHHHHHhcCCc-eEe--ccCCceEEEEEcC-CCCc
Q 021176 42 KKLLNFAKRQELVGWMIGIRRKIHQNPELGY------QEFETSQLIRSELDKMGIK-YKH--PVAVTGVVGFIGT-GEPP 111 (316)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~------~e~~~~~~l~~~l~~~G~~-~~~--~~~~~~via~~~~-~~~~ 111 (316)
+++.++++++. +++++++++|++|||+++ +|.++++||+++|+++||+ ++. ..+++|+++++.+ +++|
T Consensus 3 ~~~~~~~~~~~--~~~~~~l~~LV~i~Svs~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~l~a~~~~~~~~~ 80 (456)
T PRK08201 3 QQVEAYLRERR--EAHLEELKEFLRIPSISALSEHKEDVRKAAEWLAGALEKAGLEHVEIMETAGHPIVYADWLHAPGKP 80 (456)
T ss_pred hHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHcCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 46788888888 999999999999999985 4578999999999999996 443 2356789998843 3458
Q ss_pred EEEEEeecCCCCCcccCCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cccc
Q 021176 112 FVALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGG 183 (316)
Q Consensus 112 ~i~l~~H~Dvvp~~~~~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G 183 (316)
+|+|+||+||||+++.+.|.++ .++||++||||+ ||+++++|+|++++++.+..++++|.|+|++||| |+.|
T Consensus 81 ~lll~gH~DvVp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g 160 (456)
T PRK08201 81 TVLIYGHYDVQPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPN 160 (456)
T ss_pred EEEEEeccCCcCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCcc
Confidence 9999999999999876779654 356899999997 8999999999999988766788999999999999 7788
Q ss_pred HHHHHHcccc-ccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCC--CCCCCC-CCCCHHHHHHHHHHHHH
Q 021176 184 AHKVLEAGVL-EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGG--HAAIPQ-HSIDPILAASNVIVSLQ 259 (316)
Q Consensus 184 ~~~~~~~~~~-~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~--Hs~~p~-~g~Nai~~~~~~i~~l~ 259 (316)
+..++++... -..|++++.++....+.. - ....+++|..+++++++|+++ |||.|. .+.||+..|++++.+|+
T Consensus 161 ~~~~l~~~~~~~~~d~~ii~e~~~~~~~~-~--~i~~g~kG~~~~~l~v~G~~~~~Hs~~~~~~~~nAi~~~~~~l~~l~ 237 (456)
T PRK08201 161 LDSFVEEEKDKLAADVVLISDTTLLGPGK-P--AICYGLRGLAALEIDVRGAKGDLHSGLYGGAVPNALHALVQLLASLH 237 (456)
T ss_pred HHHHHHhhHHhccCCEEEEeCCCcCCCCC-E--EEEEecCCeEEEEEEEEeCCCCCccccccCcCCCHHHHHHHHHHhcC
Confidence 9888875321 135777764332111111 1 123567899999999999998 998654 45799999999999997
Q ss_pred Hhhhcc-----------------------------------CCC-------------CCCceEEEEEEEcCCc----Cce
Q 021176 260 HLVSRE-----------------------------------ADP-------------LDSQVVTVAKFQGGGA----FNV 287 (316)
Q Consensus 260 ~~~~~~-----------------------------------~~~-------------~~~~t~~i~~i~gg~~----~nv 287 (316)
++..+. .+. +..+|+|++.|+||.. .|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~~~~~Nv 317 (456)
T PRK08201 238 DEHGTVAVEGFYDGVRPLTPEEREEFAALGFDEEKLKRELGVDELFGEEGYTALERTWARPTLELNGVYGGFQGEGTKTV 317 (456)
T ss_pred CCCCCEecCCcccCCCCCCHHHHHHHHhCCCCHHHHHhhcCCccccCCcchHHHHHHHhCCcEEEEeeecCCCCCCCceE
Confidence 632110 000 1246899999998753 799
Q ss_pred eCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 288 IPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 288 iP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
||++|++++|+|++|+++.+++.++|++
T Consensus 318 VP~~a~~~~diR~~p~~~~e~v~~~i~~ 345 (456)
T PRK08201 318 IPAEAHAKITCRLVPDQDPQEILDLIEA 345 (456)
T ss_pred ECcceEEEEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999999999998875
No 17
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=100.00 E-value=1.6e-41 Score=316.74 Aligned_cols=245 Identities=22% Similarity=0.352 Sum_probs=203.8
Q ss_pred HHHHHhhcCCCCCcch-HHHHHHHHHHHHhcCCceEecc-----CCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCc-
Q 021176 59 GIRRKIHQNPELGYQE-FETSQLIRSELDKMGIKYKHPV-----AVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWE- 131 (316)
Q Consensus 59 ~~~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~-----~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~- 131 (316)
+++++|++|||+++++ .++++||+++|+++|++++..+ +++|+++.+++.++|+|+|+||+||||+++ +.|.
T Consensus 1 ~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~nl~~~~~~~~~~~i~l~~H~Dtvp~~~-~~w~~ 79 (364)
T TIGR01892 1 EILTKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPDGAEKSNLVAVIGPSGAGGLALSGHTDVVPYDD-AAWTR 79 (364)
T ss_pred ChHHHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCCCCccccEEEEecCCCCCeEEEEcccccccCCC-CcCCC
Confidence 3688999999999865 7999999999999999987532 367999999654458999999999999976 5785
Q ss_pred --cc-CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEecc
Q 021176 132 --YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHV 204 (316)
Q Consensus 132 --~~-~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~ 204 (316)
|. .+++|++||||+ |++++++|+|+++|++. .++++|.|+|+++|| ++.|++++++++.+ ..|++++
T Consensus 80 ~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~v~~~~~~~EE~g~~G~~~~~~~~~~-~~d~~i~--- 153 (364)
T TIGR01892 80 DPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAE--QLKKPLHLALTADEEVGCTGAPKMIEAGAG-RPRHAII--- 153 (364)
T ss_pred CCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhc--CcCCCEEEEEEeccccCCcCHHHHHHhcCC-CCCEEEE---
Confidence 43 367899999995 99999999999999875 368899999999999 77899999988753 4576664
Q ss_pred CCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC-----CCC--CCceEEEE
Q 021176 205 DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA-----DPL--DSQVVTVA 277 (316)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~-----~~~--~~~t~~i~ 277 (316)
++|++.... .+++|..+++++++|+++|++.|+.|.||+..+++++..|+++..... ..+ ..+++|++
T Consensus 154 --~ep~~~~~~---~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~i~ 228 (364)
T TIGR01892 154 --GEPTRLIPV---RAHKGYASAEVTVRGRSGHSSYPDSGVNAIFRAGRFLQRLVHLADTLLREDLDEGFTPPYTTLNIG 228 (364)
T ss_pred --CCCCCceeE---EeeceEEEEEEEEEcccccccCCccCcCHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCceEEEe
Confidence 234443322 245799999999999999999999999999999999999987642211 111 24799999
Q ss_pred EEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 278 KFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 278 ~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.|+||...|+||++|++.+|+|++|.++.+++.++|++
T Consensus 229 ~i~gg~~~nviP~~~~~~~diR~~p~~~~~~v~~~i~~ 266 (364)
T TIGR01892 229 VIQGGKAVNIIPGACEFVFEWRPIPGMDPEELLQLLET 266 (364)
T ss_pred eeecCCCCcccCCeEEEEEEeecCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999998875
No 18
>PRK05111 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.8e-41 Score=317.39 Aligned_cols=248 Identities=20% Similarity=0.307 Sum_probs=204.9
Q ss_pred HHHHHHHHHhhcCCCCCcch-------HHHHHHHHHHHHhcCCceEec-----cCCceEEEEEcCCCCcEEEEEeecCCC
Q 021176 55 GWMIGIRRKIHQNPELGYQE-------FETSQLIRSELDKMGIKYKHP-----VAVTGVVGFIGTGEPPFVALRADMDSL 122 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e-------~~~~~~l~~~l~~~G~~~~~~-----~~~~~via~~~~~~~~~i~l~~H~Dvv 122 (316)
+++++++++|++|||+|++| .++++||+++|+++|++++.. +++.|+++++++++ ++|+|+||+|||
T Consensus 5 ~~~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~nvia~~g~~~-~~il~~~H~Dvv 83 (383)
T PRK05111 5 PSFIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPGTRGKFNLLASLGSGE-GGLLLAGHTDTV 83 (383)
T ss_pred hHHHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCCCCCCceEEEEeCCCC-CeEEEEeeecee
Confidence 57999999999999999765 579999999999999988642 14579999995443 689999999999
Q ss_pred CCcccCCCc---cc-CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccc
Q 021176 123 PLQEMVEWE---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLE 194 (316)
Q Consensus 123 p~~~~~~w~---~~-~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~ 194 (316)
|+++ ..|. |. .++||++||||+ ||+++++|+|++.|++. .++++|.|+|++||| ++.|++++++++.++
T Consensus 84 p~~~-~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~~EE~g~~G~~~~~~~~~~~ 160 (383)
T PRK05111 84 PFDE-GRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLT--KLKKPLYILATADEETSMAGARAFAEATAIR 160 (383)
T ss_pred cCCC-CcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhc--CCCCCeEEEEEeccccCcccHHHHHhcCCCC
Confidence 9865 5574 44 356899999997 89999999999999875 367899999999999 778999999876543
Q ss_pred cccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc----cCCC--
Q 021176 195 KVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR----EADP-- 268 (316)
Q Consensus 195 ~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~----~~~~-- 268 (316)
.|+++. ++|++. .+..+++|..+++|+++|+++|++.|+.|.||+..+++++..++++... ...+
T Consensus 161 -~d~~i~-----~ep~~~---~~~~~~~G~~~~~i~v~G~~~H~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~ 231 (383)
T PRK05111 161 -PDCAII-----GEPTSL---KPVRAHKGHMSEAIRITGQSGHSSDPALGVNAIELMHDVIGELLQLRDELQERYHNPAF 231 (383)
T ss_pred -CCEEEE-----cCCCCC---ceeecccceEEEEEEEEeechhccCCccCcCHHHHHHHHHHHHHHHHHHHhccCCCccC
Confidence 466664 233332 1123467999999999999999999999999999999999999876421 1111
Q ss_pred -CCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 269 -LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 269 -~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
...+++|++.|+||...|+||++|++.+|+|++|+++.+++.+++++
T Consensus 232 ~~~~~t~~i~~i~gg~~~NvVP~~~~~~~diR~~p~~~~~~v~~~i~~ 279 (383)
T PRK05111 232 TVPYPTLNLGHIHGGDAPNRICGCCELHFDIRPLPGMTLEDLRGLLRE 279 (383)
T ss_pred CCCCCceeEeeeecCCcCcccCCceEEEEEEecCCCCCHHHHHHHHHH
Confidence 24689999999999999999999999999999999999999988865
No 19
>PRK06446 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=324.94 Aligned_cols=257 Identities=19% Similarity=0.235 Sum_probs=206.3
Q ss_pred HHHHHHHHHhhcCCCCCcc-h--HHHHHHHHHHHHhcCCceEec--cCCceEEEEEcCCCCcEEEEEeecCCCCCcccCC
Q 021176 55 GWMIGIRRKIHQNPELGYQ-E--FETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVE 129 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~-e--~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~ 129 (316)
+++++++++|++|||++.+ | .++++||+++|+++|++++.. .+++|++++++.+.+|+|+|+||+||||+++.+.
T Consensus 2 ~~~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~~~~~~lia~~~~~~~~~vll~gH~DvVp~~~~~~ 81 (436)
T PRK06446 2 DEELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERTKGHPVVYGEINVGAKKTLLIYNHYDVQPVDPLSE 81 (436)
T ss_pred hhHHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCEEEEEecccCCCCCcccc
Confidence 5688999999999999964 3 789999999999999998753 3578999999654468999999999999987778
Q ss_pred CcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccc-cccccEEE
Q 021176 130 WEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV-LEKVNAIF 200 (316)
Q Consensus 130 w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~-~~~~d~~~ 200 (316)
|.+++ ++||++||||+ ||+++++|+|++.+++.+ .++.+|.|+|++||| |+.|+++++++.. .-+.|+++
T Consensus 82 W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~-~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~~~~d~vi 160 (436)
T PRK06446 82 WKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKH-KLNVNVKFLYEGEEEIGSPNLEDFIEKNKNKLKADSVI 160 (436)
T ss_pred ccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcC-CCCCCEEEEEEcccccCCHhHHHHHHHHHHHhCCCEEE
Confidence 96543 56899999997 899999999999887765 578899999999999 7789998887631 11457776
Q ss_pred EeccCCCCCcceeEeecccccccceEEEEEEEe--cCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-------------
Q 021176 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGG--KGGHAAIPQHSIDPILAASNVIVSLQHLVSRE------------- 265 (316)
Q Consensus 201 ~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G--~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~------------- 265 (316)
+. +....+.+.. ....+++|..+++++++| +++|||.|..|.||+..|++++..|.+.....
T Consensus 161 ~E-~~~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~~~Hss~p~~g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 237 (436)
T PRK06446 161 ME-GAGLDPKGRP--QIVLGVKGLLYVELVLRTGTKDLHSSNAPIVRNPAWDLVKLLSTLVDGEGRVLIPGFYDDVRELT 237 (436)
T ss_pred EC-CCCccCCCCe--EEEEecCeEEEEEEEEEeCCCCCCCCCCccCCCHHHHHHHHHHhhCCCCCCEEccchhcCCCCCC
Confidence 42 1111122321 122457899999999998 99999999999999999999999997542000
Q ss_pred ---------------------------C--------CCCCCceEEEEEEEcC----CcCceeCCeEEEEEEEeccChhcH
Q 021176 266 ---------------------------A--------DPLDSQVVTVAKFQGG----GAFNVIPDSVLIGGTFRAFSKESF 306 (316)
Q Consensus 266 ---------------------------~--------~~~~~~t~~i~~i~gg----~~~nviP~~a~~~~d~R~~p~~~~ 306 (316)
. ..+..+++|++.|+|| ...|+||++|++++|+|++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~nv~~i~~g~~~~~~~nvvP~~a~~~~d~R~~p~~~~ 317 (436)
T PRK06446 238 EEERELLKKYDIDVEELRKALGFKELKYSDREKIAEALLTEPTCNIDGFYSGYTGKGSKTIVPSRAFAKLDFRLVPNQDP 317 (436)
T ss_pred HHHHHHHHhCCCCHHHHHHHhCCccccCCCcccHHHHHHhCCcEEEeeeeccccCCCCCcEecCceEEEEEEEcCCCCCH
Confidence 0 0123579999999987 367999999999999999999999
Q ss_pred HHHHHHHhh
Q 021176 307 TQLKQRIEE 315 (316)
Q Consensus 307 ~~v~~~l~~ 315 (316)
+++.++|++
T Consensus 318 ~~v~~~l~~ 326 (436)
T PRK06446 318 YKIFELLKK 326 (436)
T ss_pred HHHHHHHHH
Confidence 999999875
No 20
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.1e-41 Score=315.36 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=209.9
Q ss_pred HHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec--cCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCccc
Q 021176 56 WMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYK 133 (316)
Q Consensus 56 ~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~ 133 (316)
++++++++|++|||+|++|.++++|++++|+++||+++.. ++.+|+++++++ ++|+|+|++|+||||+++.++|.++
T Consensus 3 ~~~~~l~~Lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~n~~~~~g~-~~~~i~l~~H~D~Vp~g~~~~w~~~ 81 (375)
T PRK13009 3 DVLELAQDLIRRPSVTPDDAGCQDLLAERLEALGFTCERMDFGDVKNLWARRGT-EGPHLCFAGHTDVVPPGDLEAWTSP 81 (375)
T ss_pred hHHHHHHHHhCCCCCCCchhhHHHHHHHHHHHcCCeEEEeccCCCcEEEEEecC-CCCEEEEEeecccCCCCCcccCCCC
Confidence 5789999999999999999999999999999999998752 346799999854 4589999999999999887789554
Q ss_pred C----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-ccHHHHHHcccc--ccccEEEEe
Q 021176 134 S----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-GGAHKVLEAGVL--EKVNAIFGL 202 (316)
Q Consensus 134 ~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-~-~G~~~~~~~~~~--~~~d~~~~~ 202 (316)
+ ++||++||||+ |++++++|.|++.+++.+..++++|+|+|++|||+ + .|++.+++.... ..+|+++..
T Consensus 82 Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~i~~ 161 (375)
T PRK13009 82 PFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLITSDEEGPAINGTVKVLEWLKARGEKIDYCIVG 161 (375)
T ss_pred CCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEEeecccccccCHHHHHHHHHHcCcCCCEEEEc
Confidence 2 56899999997 89999999999999988878899999999999994 3 589988764321 246777653
Q ss_pred ccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC-CCCCCceEEEEEEEc
Q 021176 203 HVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA-DPLDSQVVTVAKFQG 281 (316)
Q Consensus 203 ~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~-~~~~~~t~~i~~i~g 281 (316)
++......+. ....+++|..+++++++|+++|++.|+.|.||+..+++++..|+....+.. ..+..++++++.|++
T Consensus 162 ep~~~~~~~~---~i~~g~~g~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~i~~i~~ 238 (375)
T PRK13009 162 EPTSTERLGD---VIKNGRRGSLTGKLTVKGVQGHVAYPHLADNPIHLAAPALAELAATEWDEGNEFFPPTSLQITNIDA 238 (375)
T ss_pred CCCcccCCCC---eEEEecceEEEEEEEEEecCcccCCCCcccCHHHHHHHHHHHHHhhhccCCCccCCCceEEEEEEec
Confidence 3221111111 112346799999999999999999999999999999999999987642221 234456899999998
Q ss_pred CC-cCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 282 GG-AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 282 g~-~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|. ..|+||++|++.+|+|++|..+.+++.++|++
T Consensus 239 G~~~~nvip~~~~~~~diR~~~~~~~e~i~~~i~~ 273 (375)
T PRK13009 239 GTGATNVIPGELEAQFNFRFSTEHTAESLKARVEA 273 (375)
T ss_pred CCCCCcccCCcEEEEEEEecCCCCCHHHHHHHHHH
Confidence 86 78999999999999999999999999998875
No 21
>PRK07522 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=2.7e-41 Score=317.66 Aligned_cols=250 Identities=19% Similarity=0.284 Sum_probs=205.8
Q ss_pred HHHHHHHHHhhcCCCCCcch-HHHHHHHHHHHHhcCCceEec----cCCceEEEEEcCCCCcEEEEEeecCCCCCcccCC
Q 021176 55 GWMIGIRRKIHQNPELGYQE-FETSQLIRSELDKMGIKYKHP----VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVE 129 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~----~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~ 129 (316)
.++++++++|++|||+|++| .++++|++++|+++|+++++. ++++|++++++++++|+|+|+||+||||+++ ..
T Consensus 4 ~~~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~nv~a~~~~~~~~~ill~~H~Dtv~~~~-~~ 82 (385)
T PRK07522 4 MSSLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDPEGDKANLFATIGPADRGGIVLSGHTDVVPVDG-QA 82 (385)
T ss_pred hhHHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecCCCCcccEEEEeCCCCCCeEEEEeecccccCCC-CC
Confidence 46899999999999999887 499999999999999998652 2457999999755568999999999999975 46
Q ss_pred Ccc---cC-CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHcccc--ccccEE
Q 021176 130 WEY---KS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVL--EKVNAI 199 (316)
Q Consensus 130 w~~---~~-~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~--~~~d~~ 199 (316)
|.+ .. .+||++||||+ ||+++++++|+++|++. .++++|.|+|++||| ++.|+++++++... ..+|++
T Consensus 83 W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~--~~~~~i~~~~~~dEE~g~~G~~~l~~~~~~~~~~~d~~ 160 (385)
T PRK07522 83 WTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAA--PLRRPLHLAFSYDEEVGCLGVPSMIARLPERGVKPAGC 160 (385)
T ss_pred CCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhC--CCCCCEEEEEEeccccCCccHHHHHHHhhhcCCCCCEE
Confidence 854 43 46899999997 99999999999999886 467899999999999 67899999875322 135666
Q ss_pred EEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCC------CC--CC
Q 021176 200 FGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREAD------PL--DS 271 (316)
Q Consensus 200 ~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~------~~--~~ 271 (316)
+. ++|++. ....+++|..+++|+++|+++|+|.|+.|.||+..+++++..|+++..+... .+ ..
T Consensus 161 i~-----~ep~~~---~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 232 (385)
T PRK07522 161 IV-----GEPTSM---RPVVGHKGKAAYRCTVRGRAAHSSLAPQGVNAIEYAARLIAHLRDLADRLAAPGPFDALFDPPY 232 (385)
T ss_pred EE-----ccCCCC---eeeeeecceEEEEEEEEeeccccCCCccCcCHHHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCc
Confidence 64 233331 1223467999999999999999999999999999999999999886432211 11 13
Q ss_pred ceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 272 QVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 272 ~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+++|++.|+||...|+||++|++.+|+|++|..+.+++.++|++
T Consensus 233 ~t~~i~~i~gG~~~nviP~~a~~~~diR~~~~~~~~~i~~~i~~ 276 (385)
T PRK07522 233 STLQTGTIQGGTALNIVPAECEFDFEFRNLPGDDPEAILARIRA 276 (385)
T ss_pred ceeEEeeeecCccccccCCceEEEEEEccCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999999999999999988875
No 22
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=100.00 E-value=5.4e-41 Score=317.17 Aligned_cols=257 Identities=19% Similarity=0.222 Sum_probs=208.5
Q ss_pred HHHHHHHHHhhcCCCCCcc--hHHHHHHHHHHHHhcCCceEec---cCCceEEEEEcC-CC-CcEEEEEeecCCCCCccc
Q 021176 55 GWMIGIRRKIHQNPELGYQ--EFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGT-GE-PPFVALRADMDSLPLQEM 127 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~-~~-~~~i~l~~H~Dvvp~~~~ 127 (316)
++++++|++|++|||++++ |.++++|++++|+++|++++.. ++++|+++.+++ ++ +|+|+|+|||||||+++
T Consensus 9 ~~~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~g~~~l~~~~~g~~~~~~~i~l~~H~DvVp~~~- 87 (400)
T TIGR01880 9 DIAVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFVPGKPVVVLTWPGSNPELPSILLNSHTDVVPVFR- 87 (400)
T ss_pred HHHHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEecCCceeEEEEEecCCCCCCeEEEEcccccCCCCc-
Confidence 6788999999999999764 6789999999999999987642 357789999944 33 38999999999999976
Q ss_pred CCCc---ccC--CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHHcccccccc
Q 021176 128 VEWE---YKS--KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGVLEKVN 197 (316)
Q Consensus 128 ~~w~---~~~--~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~~~~~~~~d 197 (316)
..|. |.. ++||++||||+ |++++++|+|++.|++.+..++++|.|+|++||| |+ .|++++++++.+.+.|
T Consensus 88 ~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~~~dEE~g~~~G~~~~~~~~~~~~~~ 167 (400)
T TIGR01880 88 EHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISFVPDEEIGGHDGMEKFAKTDEFKALN 167 (400)
T ss_pred ccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEEeCCcccCcHhHHHHHHHhhhccCCc
Confidence 4675 443 25899999998 8999999999999999888889999999999999 55 4999999876655667
Q ss_pred EEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhc------c---CCC
Q 021176 198 AIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSR------E---ADP 268 (316)
Q Consensus 198 ~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~------~---~~~ 268 (316)
..++++.....|++.. ..+.+++|..+++++++|+++|++.|. +.||+..|++++..|+++... . ...
T Consensus 168 ~~~~~d~g~~~~~~~~--~i~~~~kG~~~~~l~v~G~~~Hs~~~~-~~nai~~l~~~i~~l~~~~~~~~~~~~~~~~~~~ 244 (400)
T TIGR01880 168 LGFALDEGLASPDDVY--RVFYAERVPWWVVVTAPGNPGHGSKLM-ENTAMEKLEKSVESIRRFRESQFQLLQSNPDLAI 244 (400)
T ss_pred eEEEEcCCCccccccc--ceeEEeeEEEEEEEEEecCCCCCCCCC-CCCHHHHHHHHHHHHHHhhHHHHHHHhcCccccc
Confidence 7776533222333322 234567899999999999999999764 479999999999888765211 0 011
Q ss_pred CCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 269 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 269 ~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
...+++|++.|+||...|+||++|++.+|+|++|.++.+++.++|++
T Consensus 245 ~~~~t~~v~~i~gG~~~nvIP~~a~~~~diR~~p~~~~~~~~~~i~~ 291 (400)
T TIGR01880 245 GDVTSVNLTKLKGGVQSNVIPSEAEAGFDIRLAPSVDFEEMENRLDE 291 (400)
T ss_pred cccceeecceeccCCcCCcCCCccEEEEEEeeCCCCCHHHHHHHHHH
Confidence 12479999999999999999999999999999999999999998875
No 23
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-41 Score=317.62 Aligned_cols=256 Identities=21% Similarity=0.239 Sum_probs=210.7
Q ss_pred HHHHHHHHHhhcCCCCCc-----chHHHHHHHHHHHHhcCCc-eEecc-------C--CceEEEEEcCC-CCcEEEEEee
Q 021176 55 GWMIGIRRKIHQNPELGY-----QEFETSQLIRSELDKMGIK-YKHPV-------A--VTGVVGFIGTG-EPPFVALRAD 118 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~-----~e~~~~~~l~~~l~~~G~~-~~~~~-------~--~~~via~~~~~-~~~~i~l~~H 118 (316)
+++++++++|++|||+|+ .|.++++||+++|+++||+ +++.+ + ++|+++++++. ++++|+|+||
T Consensus 5 ~~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~nl~~~~~g~~~~~~lll~~H 84 (400)
T PRK13983 5 DEMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDPRVIEGVRPNIVAKIPGGDGKRTLWIISH 84 (400)
T ss_pred HHHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCcccccCCCccEEEEecCCCCCCeEEEEee
Confidence 679999999999999984 4889999999999999998 76421 1 58999999654 3479999999
Q ss_pred cCCCCCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHH
Q 021176 119 MDSLPLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLE 189 (316)
Q Consensus 119 ~Dvvp~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~ 189 (316)
+||||+++.+.|.+++ +++|++||||+ |++++++|.|+++|++.+..++++|.|+|++||| |+ .|++++++
T Consensus 85 ~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~g~~~~~~ 164 (400)
T PRK13983 85 MDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYNLGLAFVSDEETGSKYGIQYLLK 164 (400)
T ss_pred ccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCcEEEEEEeccccCCcccHHHHHh
Confidence 9999998877896543 46899999996 8999999999999999888899999999999999 66 48999997
Q ss_pred c--cccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHH-hhhcc-
Q 021176 190 A--GVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQH-LVSRE- 265 (316)
Q Consensus 190 ~--~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~-~~~~~- 265 (316)
. +.+.+.|++++ ++.+.|++... ..+++|..+++|+++|+++|+|.|+.|.||+..+++++..+++ +....
T Consensus 165 ~~~~~~~~~d~~i~--~~~~~~~~~~i---~~~~~G~~~~~v~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~ 239 (400)
T PRK13983 165 KHPELFKKDDLILV--PDAGNPDGSFI---EIAEKSILWLKFTVKGKQCHASTPENGINAHRAAADFALELDEALHEKFN 239 (400)
T ss_pred hcccccCCCCEEEE--ecCCCCCCcee---EEeecceEEEEEEEEeEccccCCCCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 6 44555677765 34455665432 2346799999999999999999999999999999999999987 42211
Q ss_pred -CC-C--CCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 266 -AD-P--LDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 266 -~~-~--~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.+ . ....+++++.+.+| ...|+||++|++++|+|++|+++.++++++|++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~nvvp~~~~~~~diR~~p~~~~~~v~~~l~~ 294 (400)
T PRK13983 240 AKDPLFDPPYSTFEPTKKEANVDNINTIPGRDVFYFDCRVLPDYDLDEVLKDIKE 294 (400)
T ss_pred ccccccCCCCcccccceeecCCcCCcccCCeeEEEEEEEeCCCCCHHHHHHHHHH
Confidence 11 1 12346788888877 589999999999999999999999999998875
No 24
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=100.00 E-value=4.9e-41 Score=314.34 Aligned_cols=247 Identities=20% Similarity=0.220 Sum_probs=198.3
Q ss_pred HHHHhhcCCCCCcchHHHHHHHHHHHHhcCCc-eEeccCCceEEEEEcCCCCcEEEEEeecCCCCCcc--cCCCccc---
Q 021176 60 IRRKIHQNPELGYQEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQE--MVEWEYK--- 133 (316)
Q Consensus 60 ~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~--~~~w~~~--- 133 (316)
++++|++|||+|++|.++++|++++|+++|++ ++....+.|++++++++++|+|+|+|||||||+++ ...|.++
T Consensus 1 ll~~Lv~ipS~s~~e~~~~~~i~~~l~~~g~~~~~~~~~~~nvva~~~~~~~~~l~l~gH~DtVp~~~~~~~~W~~~p~~ 80 (373)
T TIGR01900 1 LLQQIMDIFSPSDHEGPIADEIEAALNNLELEGLEVFRFGDNVLARTDFGKASRVILAGHIDTVPIADNFPPKWLEPGDS 80 (373)
T ss_pred ChHHHhCCCCCCchHHHHHHHHHHHHhhccccCceEEEECCEEEEecCCCCCCeEEEeCccccccCCCCChhhhccCccc
Confidence 47899999999999999999999999999653 22212245999998654468999999999999875 2457532
Q ss_pred ---------CCCCCeeeecCc---hHHHHHHHHHHHHHHh--ccccCCceEEEEEecCCC-Cc--ccHHHHHHccc-ccc
Q 021176 134 ---------SKIPGKMHACGH---DGHVTMLLGAAKILQE--HREELKGTVVLVFQPAEE-GG--GGAHKVLEAGV-LEK 195 (316)
Q Consensus 134 ---------~~~~g~l~grG~---k~~~a~~l~a~~~l~~--~~~~~~~~i~~~~~~~EE-g~--~G~~~~~~~~~-~~~ 195 (316)
.++||++||||+ |++++++|+|+++|++ .+..++++|.|+|++||| ++ .|+..++++.. +..
T Consensus 81 ~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~~i~~~~~~dEE~~~~~~G~~~~~~~~~~~~~ 160 (373)
T TIGR01900 81 LIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKHDLTLIAYDCEEVAAEKNGLGHIRDAHPDWLA 160 (373)
T ss_pred ccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCCCEEEEEEecccccCCCCCHHHHHHhCccccc
Confidence 356899999998 8999999999999954 355788999999999999 43 59999987642 124
Q ss_pred ccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC--CC-CCCc
Q 021176 196 VNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA--DP-LDSQ 272 (316)
Q Consensus 196 ~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~--~~-~~~~ 272 (316)
.|++++.+ |++. ....+++|..+++++++|+++|++.|+.|.||+..|++++..|+++..+.. +. ...+
T Consensus 161 ~d~~iv~E-----pt~~---~i~~g~~G~~~~~i~v~G~~~H~s~p~~g~NAi~~~~~~i~~l~~l~~~~~~~~~~~~~~ 232 (373)
T TIGR01900 161 ADFAIIGE-----PTGG---GIEAGCNGNIRFDVTAHGVAAHSARAWLGDNAIHKAADIINKLAAYEAAEVNIDGLDYRE 232 (373)
T ss_pred CCEEEEEC-----CCCC---cccccceeeEEEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHHhhcccccccCCcccc
Confidence 67766532 2221 123457899999999999999999999999999999999999988643211 11 2247
Q ss_pred eEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 273 VVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 273 t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
++|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|+
T Consensus 233 t~~v~~I~GG~~~nvVP~~a~~~~diR~~p~~~~e~~~~~i~ 274 (373)
T TIGR01900 233 GLNATFCEGGKANNVIPDEARMHLNFRFAPDKDLAEAKALMM 274 (373)
T ss_pred eEEEEEEeCCCCCcccCCeEEEEEEEecCCCcCHHHHHHHHH
Confidence 899999999999999999999999999999999999998874
No 25
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=100.00 E-value=5.7e-41 Score=313.88 Aligned_cols=254 Identities=22% Similarity=0.309 Sum_probs=206.8
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec--cCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCccc--
Q 021176 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYK-- 133 (316)
Q Consensus 58 ~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~-- 133 (316)
++++++|++|||+|++|.++++|++++|+++||+++.. ++.+|+++++++ ++|+|+|+||+||||+++.+.|.++
T Consensus 2 ~~~l~~lv~ips~s~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~~g~-~~~~i~~~~H~DtVp~~~~~~W~~~p~ 80 (370)
T TIGR01246 2 TELAKELISRPSVTPNDAGCQDIIAERLEKLGFEIEWMHFGDTKNLWATRGT-GEPVLAFAGHTDVVPAGPEEQWSSPPF 80 (370)
T ss_pred hHHHHHHhcCCCCCcchHHHHHHHHHHHHHCCCEEEEEecCCCceEEEEecC-CCcEEEEEccccccCCCCccccccCCC
Confidence 57899999999999999999999999999999998752 346799998754 4589999999999999887788543
Q ss_pred -C-CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHHcccc--ccccEEEEecc
Q 021176 134 -S-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGVL--EKVNAIFGLHV 204 (316)
Q Consensus 134 -~-~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~~~~~--~~~d~~~~~~~ 204 (316)
. .+||++||||+ |+++++++.|++.+++.+..++++|+|+|++||| ++ .|++.+++.... ..+|+++..++
T Consensus 81 ~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dEE~~~~~G~~~~~~~~~~~~~~~d~~i~~ep 160 (370)
T TIGR01246 81 EPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDEEGTAIDGTKKVVETLMARDELIDYCIVGEP 160 (370)
T ss_pred CcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCCcCHHHHHHHHHhcCCCCCEEEEcCC
Confidence 2 46899999997 8999999999999988877888999999999999 43 699988763211 24688776433
Q ss_pred CCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc-CCCCCCceEEEEEEEcCC
Q 021176 205 DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-ADPLDSQVVTVAKFQGGG 283 (316)
Q Consensus 205 ~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~gg~ 283 (316)
......+.. ...+++|..+++++++|+++|++.|+.|.||+..+++++..|++...+. ...+..++++++.|+||.
T Consensus 161 ~~~~~~~~~---i~~~~~G~~~~~v~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~t~~i~~i~~g~ 237 (370)
T TIGR01246 161 SSVKKLGDV---IKNGRRGSITGNLTIKGIQGHVAYPHLANNPIHKAAPALAELTAIKWDEGNEFFPPTSLQITNIHAGT 237 (370)
T ss_pred CCcccCCce---EEEeeeEEEEEEEEEEccCcccCCcccCCCHHHHHHHHHHHHhhhhhccCCccCCCCceEeeeeecCC
Confidence 221111111 1234579999999999999999999999999999999999998763221 122345799999999996
Q ss_pred -cCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 284 -AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 284 -~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
..|+||++|++.+|+|++|.++.+++.++|++
T Consensus 238 ~~~nvvP~~~~~~~diR~~~~~~~~~v~~~i~~ 270 (370)
T TIGR01246 238 GANNVIPGELYVQFNLRFSTEVSDEILKQRVEA 270 (370)
T ss_pred CCCcccCCceEEEEEEecCCCCCHHHHHHHHHH
Confidence 68999999999999999999999999998875
No 26
>PRK07907 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=318.19 Aligned_cols=266 Identities=17% Similarity=0.178 Sum_probs=213.8
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcc------hHHHHHHHHHHHHhcCC-ceEec--cCCceEEEEEcCC-CC
Q 021176 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ------EFETSQLIRSELDKMGI-KYKHP--VAVTGVVGFIGTG-EP 110 (316)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~------e~~~~~~l~~~l~~~G~-~~~~~--~~~~~via~~~~~-~~ 110 (316)
.+++.+++++++ +++++++++|++|||+|++ |.++++||+++|+++|+ +++.. ++++|++++++++ ++
T Consensus 6 ~~~~~~~i~~~~--~~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~nl~a~~~~~~~~ 83 (449)
T PRK07907 6 ADDLRARVAELL--PRVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVSADGAPAVIGTRPAPPGA 83 (449)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEecCCCCEEEEEecCCCCC
Confidence 457889999988 9999999999999999953 67899999999999998 67653 4678999999654 35
Q ss_pred cEEEEEeecCCCCCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 021176 111 PFVALRADMDSLPLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (316)
Q Consensus 111 ~~i~l~~H~Dvvp~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~ 182 (316)
|+|+|+||+||||+++..+|.+++ ++||+|||||+ ||+++++|+|+++| +.+++++|.|++++||| |+.
T Consensus 84 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l---~~~~~~~i~~~~~~dEE~g~~ 160 (449)
T PRK07907 84 PTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL---GGDLPVGVTVFVEGEEEMGSP 160 (449)
T ss_pred CEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh---ccCCCCcEEEEEEcCcccCCc
Confidence 899999999999998877896543 46899999997 89999999999999 34578999999999999 778
Q ss_pred cHHHHHHccc-cccccEEEEeccCCCCCc-ceeEeecccccccceEEEEEEE--ecCCCCCC-CCCCCCHHHHHHHHHHH
Q 021176 183 GAHKVLEAGV-LEKVNAIFGLHVDPNLPI-GEVASRPGPLLAGSGFFEAVIG--GKGGHAAI-PQHSIDPILAASNVIVS 257 (316)
Q Consensus 183 G~~~~~~~~~-~~~~d~~~~~~~~~~~~~-g~~~~~~~~~~~G~~~~~i~v~--G~~~Hs~~-p~~g~Nai~~~~~~i~~ 257 (316)
|+++++++.. .-+.|++++.+ ++... +.-. ...+++|..+++++++ |+++|||. +..+.||+..+++++.+
T Consensus 161 g~~~~l~~~~~~~~~d~~iv~E--~~~~~~~~p~--i~~~~kG~~~~~l~v~~~G~~~Hss~~~~~~~nAi~~~~~~l~~ 236 (449)
T PRK07907 161 SLERLLAEHPDLLAADVIVIAD--SGNWSVGVPA--LTTSLRGNADVVVTVRTLEHAVHSGQFGGAAPDALTALVRLLAT 236 (449)
T ss_pred cHHHHHHhchHhhcCCEEEEec--CCcCCCCCeE--EEEecCCcEEEEEEEEECCCCCCCccccccCCCHHHHHHHHHHh
Confidence 9999988632 12457776643 32221 1111 1245789999999998 89999996 56789999999999999
Q ss_pred HHHhhhcc-------CC---------------------------------CCCCceEEEEEEEc---CCcCceeCCeEEE
Q 021176 258 LQHLVSRE-------AD---------------------------------PLDSQVVTVAKFQG---GGAFNVIPDSVLI 294 (316)
Q Consensus 258 l~~~~~~~-------~~---------------------------------~~~~~t~~i~~i~g---g~~~nviP~~a~~ 294 (316)
|++...+. .. .+..+++|++.|++ |.+.|+||++|++
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~~~~~g~~~nvIP~~a~~ 316 (449)
T PRK07907 237 LHDEDGNVAVDGLDATEPWLGVDYDEERFRADAGVLDGVELIGTGSVADRLWAKPAITVIGIDAPPVAGASNALPPSARA 316 (449)
T ss_pred hCCCCCCEeCCCccCCCCcccccccHHHHHHHhhhhhcccccCCChHHHHhhhcCcEEEEeeecCCCCCCCCEecCceEE
Confidence 97642210 00 02457999999996 4688999999999
Q ss_pred EEEEeccChhcHHHHHHHHhh
Q 021176 295 GGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 295 ~~d~R~~p~~~~~~v~~~l~~ 315 (316)
++|+|++|+++.+++.++|++
T Consensus 317 ~~diR~~p~~~~e~v~~~l~~ 337 (449)
T PRK07907 317 RLSLRVAPGQDAAEAQDALVA 337 (449)
T ss_pred EEEEEcCCCCCHHHHHHHHHH
Confidence 999999999999999998865
No 27
>PRK09133 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=321.00 Aligned_cols=255 Identities=13% Similarity=0.132 Sum_probs=206.4
Q ss_pred HHHHHHHHHhhcCCCCC--cchHHHHHHHHHHHHhcCCceE---e---ccCCceEEEEEcC-CCCcEEEEEeecCCCCCc
Q 021176 55 GWMIGIRRKIHQNPELG--YQEFETSQLIRSELDKMGIKYK---H---PVAVTGVVGFIGT-GEPPFVALRADMDSLPLQ 125 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s--~~e~~~~~~l~~~l~~~G~~~~---~---~~~~~~via~~~~-~~~~~i~l~~H~Dvvp~~ 125 (316)
+++++++++|++|||++ ++|.++++|++++|+++|++++ . .++++|+++++++ +++|+|+|+|||||||++
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~nli~~~~g~~~~~~lll~~H~DtVp~~ 116 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGPYPRKGNLVARLRGTDPKKPILLLAHMDVVEAK 116 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccCCCCceeEEEEecCCCCCCcEEEEeecccCCCC
Confidence 67999999999999998 6788999999999999999753 2 2356899999954 345899999999999996
Q ss_pred ccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHHHHHHcccc-cc
Q 021176 126 EMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGVL-EK 195 (316)
Q Consensus 126 ~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~G~~~~~~~~~~-~~ 195 (316)
+ .+|.+++ ++||++||||+ |++++++|+|+++|++.+..++++|.|+|++||| + +.|+++++++... -+
T Consensus 117 ~-~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~g~~G~~~l~~~~~~~~~ 195 (472)
T PRK09133 117 R-EDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIILALTGDEEGTPMNGVAWLAENHRDLID 195 (472)
T ss_pred h-hcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEECccccCccchHHHHHHHHhhccC
Confidence 5 4686553 56899999998 8999999999999999888889999999999999 4 4799999876421 13
Q ss_pred ccEEEEeccCC------CCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc----
Q 021176 196 VNAIFGLHVDP------NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE---- 265 (316)
Q Consensus 196 ~d~~~~~~~~~------~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~---- 265 (316)
.|+++. +... ++|+. .....+++|..+++|+++|+++|+|.|+ +.||+..++++|..|+++..+.
T Consensus 196 ~~~~i~-e~~~~~~~~~gept~---~~i~~g~kG~~~~~i~v~G~~~Hss~p~-~~nAi~~l~~~l~~l~~~~~~~~~~~ 270 (472)
T PRK09133 196 AEFALN-EGGGGTLDEDGKPVL---LTVQAGEKTYADFRLEVTNPGGHSSRPT-KDNAIYRLAAALSRLAAYRFPVMLND 270 (472)
T ss_pred eEEEEE-CCCccccCCCCCceE---EEeeeecceeEEEEEEEecCCCCCCCCC-CCChHHHHHHHHHHHhhCCCCCccCC
Confidence 455554 3221 22222 1234567899999999999999999986 5899999999999987641100
Q ss_pred ------------------------------------------CCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccCh
Q 021176 266 ------------------------------------------ADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 303 (316)
Q Consensus 266 ------------------------------------------~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~ 303 (316)
......+++|++.|+||...|+||++|++.+|+|++|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~gG~~~NvVP~~a~~~lDiR~~p~ 350 (472)
T PRK09133 271 VTRAYFKQSAAIETGPLAAAMRAFAANPADEAAIALLSADPSYNAMLRTTCVATMLEGGHAENALPQRATANVNCRIFPG 350 (472)
T ss_pred ccHHHHHHHHHhCCchHHHHHHHHhcCcchHHHHHHHhcCcchhheeeeeEEeeEEecCCcCccCCCceEEEEEEEeCCc
Confidence 00123579999999999999999999999999999999
Q ss_pred hcHHHHHHHHhh
Q 021176 304 ESFTQLKQRIEE 315 (316)
Q Consensus 304 ~~~~~v~~~l~~ 315 (316)
++.+++.++|++
T Consensus 351 ~~~e~v~~~I~~ 362 (472)
T PRK09133 351 DTIEAVRATLKQ 362 (472)
T ss_pred hhHHHHHHHHHH
Confidence 999999999875
No 28
>PRK09104 hypothetical protein; Validated
Probab=100.00 E-value=2.8e-40 Score=317.82 Aligned_cols=270 Identities=16% Similarity=0.181 Sum_probs=215.7
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcch------HHHHHHHHHHHHhcCCceEe--ccCCceEEEEEcC-C-CC
Q 021176 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE------FETSQLIRSELDKMGIKYKH--PVAVTGVVGFIGT-G-EP 110 (316)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~--~~~~~~via~~~~-~-~~ 110 (316)
.+++.++++.++ +++++++++|++|||+|+++ .++++||+++|+++|++++. ..+++|+++++++ + .+
T Consensus 5 ~~~~~~~~~~~~--~~~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~l~a~~~g~~~~~ 82 (464)
T PRK09104 5 LDPVLDHIDANL--DASLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDTPGHPMVVAHHEGPTGDA 82 (464)
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEecCCCCEEEEEecCCCCCC
Confidence 456889999988 99999999999999999754 68899999999999999875 3356799999964 2 35
Q ss_pred cEEEEEeecCCCCCcccCCCcccC----CCCC-----eeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 021176 111 PFVALRADMDSLPLQEMVEWEYKS----KIPG-----KMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAE 178 (316)
Q Consensus 111 ~~i~l~~H~Dvvp~~~~~~w~~~~----~~~g-----~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 178 (316)
|+|+|+||+||||+++.++|.+++ .++| ++||||+ ||+++++|.|+++|++.+..++++|.|+|++||
T Consensus 83 ~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~~~~~i~~~~~~dE 162 (464)
T PRK09104 83 PHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGSLPVRVTILFEGEE 162 (464)
T ss_pred CEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCCCCCcEEEEEECcc
Confidence 999999999999998877896653 2343 5999997 899999999999999987778899999999999
Q ss_pred C-CcccHHHHHHcccc-ccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEe--cCCCCCC-CCCCCCHHHHHHH
Q 021176 179 E-GGGGAHKVLEAGVL-EKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGG--KGGHAAI-PQHSIDPILAASN 253 (316)
Q Consensus 179 E-g~~G~~~~~~~~~~-~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G--~~~Hs~~-p~~g~Nai~~~~~ 253 (316)
| |+.|+.+++.+... ...|++++.+ ++...+.. .....+++|..+++++++| +++|||. |+.+.||+..|++
T Consensus 163 E~g~~g~~~~l~~~~~~~~~d~~iv~E--~~~~~~~~-~~i~~~~kG~~~~~l~v~g~~~~~Hss~~~~~g~nai~~~~~ 239 (464)
T PRK09104 163 ESGSPSLVPFLEANAEELKADVALVCD--TGMWDRET-PAITTSLRGLVGEEVTITAADRDLHSGLFGGAAANPIRVLTR 239 (464)
T ss_pred ccCCccHHHHHHhhHHhcCCCEEEEeC--CCCCCCCC-eEEEeecCCeEEEEEEEEeCCCCccccccCCccCCHHHHHHH
Confidence 9 77888888875321 1457777643 32211110 1123457899999999999 7899994 7889999999999
Q ss_pred HHHHHHHhhhccC------------------------------------C------------CCCCceEEEEEEEcCC--
Q 021176 254 VIVSLQHLVSREA------------------------------------D------------PLDSQVVTVAKFQGGG-- 283 (316)
Q Consensus 254 ~i~~l~~~~~~~~------------------------------------~------------~~~~~t~~i~~i~gg~-- 283 (316)
++.+|++...+.. . .+..+++|++.|+||.
T Consensus 240 ~l~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~i~gg~~~ 319 (464)
T PRK09104 240 ILAGLHDETGRVTLPGFYDGVEELPPEILAQWKALGFTAEAFLGPVGLSIPAGEKGRSVLEQIWSRPTCEINGIWGGYTG 319 (464)
T ss_pred HHHhccCCCCCEeCCccccCCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccCcccHHHHHHHhhCCeEEEeccccCCCC
Confidence 9999876321100 0 0224789999999985
Q ss_pred --cCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 284 --AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 284 --~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
..|+||++|++++|+|++|+++++++.++|++
T Consensus 320 ~~~~nvvP~~~~~~~diR~~p~~~~~~v~~~i~~ 353 (464)
T PRK09104 320 EGFKTVIPAEASAKVSFRLVGGQDPAKIREAFRA 353 (464)
T ss_pred CCCccEecCceEEEEEEEeCCCCCHHHHHHHHHH
Confidence 46999999999999999999999999998875
No 29
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=1.8e-39 Score=301.70 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=201.5
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhc-CCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCccc
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM-GIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYK 133 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~ 133 (316)
+++++++++|++|||+|++|.++++||+++|+++ |+++... ..|++++++++.+++|+|+||+||||+++ .+++.
T Consensus 7 ~~~~~~l~~li~ips~s~~e~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~i~l~~H~Dtvp~~~--~~~~~ 82 (352)
T PRK13007 7 ADLAELTAALVDIPSVSGDEKALADAVEAALRALPHLEVIRH--GNSVVARTDLGRPSRVVLAGHLDTVPVAD--NLPSR 82 (352)
T ss_pred HHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHhCcCceEEec--CCeEEEEccCCCCCeEEEEccccccCCCC--CCCcc
Confidence 6799999999999999999999999999999996 8877643 46899999655456899999999999865 34433
Q ss_pred CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc--ccHHHHHHcc-ccccccEEEEeccCC
Q 021176 134 SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG--GGAHKVLEAG-VLEKVNAIFGLHVDP 206 (316)
Q Consensus 134 ~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~--~G~~~~~~~~-~~~~~d~~~~~~~~~ 206 (316)
.+||++||||+ |+++|++|+|+++|. +++++|.|+|++||| ++ .|++.++... .+.+.|++++.++
T Consensus 83 -~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~----~~~~~i~~~~~~~EE~~~~~~G~~~~~~~~~~~~~~d~~i~~ep-- 155 (352)
T PRK13007 83 -REGDRLYGCGASDMKSGLAVMLHLAATLA----EPAHDLTLVFYDCEEVEAEANGLGRLAREHPEWLAGDFAILLEP-- 155 (352)
T ss_pred -eeCCEEEccCcccccHHHHHHHHHHHHhh----ccCCCeEEEEEecccccCCcccHHHHHHhcccccCCCEEEEecC--
Confidence 56899999998 899999999999993 478899999999999 44 5888888653 2235677776432
Q ss_pred CCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC---CCCCCceEEEEEEEcCC
Q 021176 207 NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA---DPLDSQVVTVAKFQGGG 283 (316)
Q Consensus 207 ~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~---~~~~~~t~~i~~i~gg~ 283 (316)
.. +.+ ..+++|..+++++++|+++|||.|+.|.||+..+++++..++++..+.. .....+++|++.|+||.
T Consensus 156 ~~--~~i----~~~~~G~~~~~i~v~G~~~Hs~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~i~gG~ 229 (352)
T PRK13007 156 TD--GVI----EAGCQGTLRVTVTFHGRRAHSARSWLGENAIHKAAPVLARLAAYEPREVVVDGLTYREGLNAVRISGGV 229 (352)
T ss_pred CC--Cce----EeeccceEEEEEEEEecccccCCCccCcCHHHHHHHHHHHHHHhcccccccCCCCccceeEeEeEecCC
Confidence 21 222 2346799999999999999999999999999999999999988643221 11224689999999999
Q ss_pred cCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 284 AFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 284 ~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+.|+||++|++.+|+|++|+++.+++.++|++
T Consensus 230 ~~nviP~~a~~~~diR~~p~~~~~~v~~~i~~ 261 (352)
T PRK13007 230 AGNVIPDECVVNVNYRFAPDRSLEEALAHVRE 261 (352)
T ss_pred cCccCCCeEEEEEEEeeCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999875
No 30
>PRK08262 hypothetical protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=316.34 Aligned_cols=256 Identities=16% Similarity=0.217 Sum_probs=202.3
Q ss_pred HHHHHHHHHhhcCCCCCcchH---------HHHHHHHHHHHhcCCceEec-cCCceEEEEE-cCCCC-cEEEEEeecCCC
Q 021176 55 GWMIGIRRKIHQNPELGYQEF---------ETSQLIRSELDKMGIKYKHP-VAVTGVVGFI-GTGEP-PFVALRADMDSL 122 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~---------~~~~~l~~~l~~~G~~~~~~-~~~~~via~~-~~~~~-~~i~l~~H~Dvv 122 (316)
+++++++++|++|||+|++|. ++++||+++|+.+|+.++.. .+..|+++.+ +.+++ |+|+|+||+|||
T Consensus 44 ~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~~~~~vv~~~~g~~~~~~~ill~gH~DvV 123 (486)
T PRK08262 44 DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVVGGHSLLYTWKGSDPSLKPIVLMAHQDVV 123 (486)
T ss_pred HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEECCccEEEEEECCCCCCCeEEEECccccc
Confidence 789999999999999998663 48999999999999976642 2335778777 43333 899999999999
Q ss_pred CCccc--CCCc---cc-CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccc
Q 021176 123 PLQEM--VEWE---YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (316)
Q Consensus 123 p~~~~--~~w~---~~-~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~ 192 (316)
|+++. ..|. |. .++||++||||+ ||+++++|.|++.|++.+.+++++|+|+|++||| |+.|++++++...
T Consensus 124 p~~~~~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l~ 203 (486)
T PRK08262 124 PVAPGTEGDWTHPPFSGVIADGYVWGRGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELLK 203 (486)
T ss_pred CCCCCCcccCccCCCceEeeCCEEEecCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHHH
Confidence 98753 4694 44 357899999996 9999999999999999888899999999999999 7789998886421
Q ss_pred cc--cccEEE------Eecc--CCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 021176 193 LE--KVNAIF------GLHV--DPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLV 262 (316)
Q Consensus 193 ~~--~~d~~~------~~~~--~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~ 262 (316)
.. ..|+++ ..++ ..+.|++.+ +.+++|..+++++++|+++|||.|+. .||+..++++|.+|++..
T Consensus 204 ~~~~~~~~~~~~~~~i~~~~~~~~~~p~~~i----~~~~kG~~~~~i~v~G~~~Hss~p~~-~nai~~l~~~l~~l~~~~ 278 (486)
T PRK08262 204 ERGVRLAFVLDEGGAITEGVLPGVKKPVALI----GVAEKGYATLELTARATGGHSSMPPR-QTAIGRLARALTRLEDNP 278 (486)
T ss_pred HhcCCEEEEEeCCceecccccCCCCceEEee----EEeeeeeEEEEEEEecCCCCCCCCCC-CCHHHHHHHHHHHHhhCC
Confidence 11 233332 1110 112343433 34568999999999999999999988 999999999999998641
Q ss_pred hcc--------------------------------------------CCCCCCceEEEEEEEcCCcCceeCCeEEEEEEE
Q 021176 263 SRE--------------------------------------------ADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTF 298 (316)
Q Consensus 263 ~~~--------------------------------------------~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~ 298 (316)
.+. ...+..+|+|++.|+||...|+||++|++++|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~i~~I~gG~~~NvIP~~a~~~~di 358 (486)
T PRK08262 279 LPMRLRGPVAEMFDTLAPEMSFAQRVVLANLWLFEPLLLRVLAKSPETAAMLRTTTAPTMLKGSPKDNVLPQRATATVNF 358 (486)
T ss_pred CCCccChHHHHHHHHHHHhcCHHHHHHhhcccchhhHHHHHHhcCCccceeEEeeeeeeEEecCCccccCCCccEEEEEE
Confidence 000 001235799999999999999999999999999
Q ss_pred eccChhcHHHHHHHHhh
Q 021176 299 RAFSKESFTQLKQRIEE 315 (316)
Q Consensus 299 R~~p~~~~~~v~~~l~~ 315 (316)
|++|+++.+++.++|++
T Consensus 359 R~~p~~~~~~i~~~i~~ 375 (486)
T PRK08262 359 RILPGDSVESVLAHVRR 375 (486)
T ss_pred EeCCCCCHHHHHHHHHH
Confidence 99999999999999876
No 31
>PRK07473 carboxypeptidase; Provisional
Probab=100.00 E-value=6e-39 Score=300.49 Aligned_cols=247 Identities=15% Similarity=0.152 Sum_probs=202.8
Q ss_pred HHHHHHHHHhhcCCCCCcchH---HHHHHHHHHHHhcCCceEecc---C-CceEEEEEcC--CCCcEEEEEeecCCCCCc
Q 021176 55 GWMIGIRRKIHQNPELGYQEF---ETSQLIRSELDKMGIKYKHPV---A-VTGVVGFIGT--GEPPFVALRADMDSLPLQ 125 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~---~~~~~l~~~l~~~G~~~~~~~---~-~~~via~~~~--~~~~~i~l~~H~Dvvp~~ 125 (316)
+++++++++|++|||++++|. ++++|++++|+++|++++..+ + ..|+++++++ ..+|+|+|+||+||||+.
T Consensus 11 ~~~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lll~gH~DtV~~~ 90 (376)
T PRK07473 11 EAMLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGRQGFGDCVRARFPHPRQGEPGILIAGHMDTVHPV 90 (376)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCeEEEEeCCCCCCCCeEEEEecCCCCCCC
Confidence 679999999999999999875 677899999999999987632 2 2478999853 235899999999999753
Q ss_pred c-cCCCcccCCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEE
Q 021176 126 E-MVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIF 200 (316)
Q Consensus 126 ~-~~~w~~~~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~ 200 (316)
. ...+||. ++||++||||+ |++++++|+|+++|++.+..++.+|.|+|++||| |+.|++.+++++.. ..|+++
T Consensus 91 ~~~~~~p~~-~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~g~~~~~~~~~~-~~d~~i 168 (376)
T PRK07473 91 GTLEKLPWR-REGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPDEEVGTPSTRDLIEAEAA-RNKYVL 168 (376)
T ss_pred CCccCCCeE-EECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCCcccCCccHHHHHHHhhc-cCCEEE
Confidence 3 2233554 66899999995 9999999999999999887778899999999999 77899999986533 457777
Q ss_pred EeccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEE
Q 021176 201 GLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKF 279 (316)
Q Consensus 201 ~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i 279 (316)
+. +++...+.+. .+++|..+++|+++|+++|++ .|+.|.||+..+++++..|+++.. ..+++|++.|
T Consensus 169 v~--ep~~~~~~v~----~~~~G~~~~~v~~~G~~aHag~~p~~g~nAi~~~~~~i~~l~~~~~------~~~~~~vg~i 236 (376)
T PRK07473 169 VP--EPGRPDNGVV----TGRYAIARFNLEATGRPSHAGATLSEGRSAIREMARQILAIDAMTT------EDCTFSVGIV 236 (376)
T ss_pred Ee--CCCCCCCCEE----EECeeeEEEEEEEEeEcCCCCCCcccCcCHHHHHHHHHHHHHHhcC------CCceEeEeeE
Confidence 64 3332222232 346799999999999999997 799999999999999999988742 2368999999
Q ss_pred EcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 280 QGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 280 ~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+||...|+||++|++.++.|.......+++.+++.+
T Consensus 237 ~gg~~~n~VP~~~~~~~d~r~~~~~~~~~~~~~i~~ 272 (376)
T PRK07473 237 HGGQWVNCVATTCTGEALSMAKRQADLDRGVARMLA 272 (376)
T ss_pred EcCCCCcCCCCceEEEEEEEeCCHhHHHHHHHHHHH
Confidence 999999999999999999999888888888777753
No 32
>PRK07906 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=310.11 Aligned_cols=255 Identities=16% Similarity=0.226 Sum_probs=199.1
Q ss_pred HHHHHHhhcCCCCC------cchHHHHHHHHHHHHhcCCceEec---cCCceEEEEEcCC-C-CcEEEEEeecCCCCCcc
Q 021176 58 IGIRRKIHQNPELG------YQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTG-E-PPFVALRADMDSLPLQE 126 (316)
Q Consensus 58 ~~~~~~l~~ips~s------~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~-~-~~~i~l~~H~Dvvp~~~ 126 (316)
++++++|++|||++ .+|.++++|++++|+++|++++.. ++.+|+++++++. + .|+|+|++|+||||+++
T Consensus 2 ~~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~nv~~~~~g~~~~~~~lll~~H~DtVp~~~ 81 (426)
T PRK07906 2 VDLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESAPGRANVVARLPGADPSRPALLVHGHLDVVPAEA 81 (426)
T ss_pred hHHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecCCCceEEEEEEeCCCCCCCcEEEEcccccCCCCc
Confidence 57899999999998 678999999999999999998753 2568999999543 3 48999999999999965
Q ss_pred cCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHHcc--cccc
Q 021176 127 MVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAG--VLEK 195 (316)
Q Consensus 127 ~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~~~--~~~~ 195 (316)
.+|.+++ ++||++||||+ |++++++|+|+++|++.+..++++|.|+|++||| ++ .|++.++++. .++.
T Consensus 82 -~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~~g~~~l~~~~~~~~~~ 160 (426)
T PRK07906 82 -ADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFAFVADEEAGGTYGAHWLVDNHPELFEG 160 (426)
T ss_pred -ccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEecCcccchhhhHHHHHHHHHHhccc
Confidence 4696543 56899999997 8999999999999999988899999999999999 44 5999988753 1222
Q ss_pred ccEEEEeccCC--CCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc--------
Q 021176 196 VNAIFGLHVDP--NLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE-------- 265 (316)
Q Consensus 196 ~d~~~~~~~~~--~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~-------- 265 (316)
.++++...... ..+..........+++|..+++|+++|+++|+|.|+. .||+..++++|..|+++..+.
T Consensus 161 ~~~ii~e~~~~~~~~~~~~~~~~i~~~~kG~~~~~v~v~G~~~Hss~p~~-~nAi~~~~~~l~~l~~~~~~~~~~~~~~~ 239 (426)
T PRK07906 161 VTEAISEVGGFSLTVPGRDRLYLIETAEKGLAWMRLTARGRAGHGSMVND-DNAVTRLAEAVARIGRHRWPLVLTPTVRA 239 (426)
T ss_pred hheEEECCCceeeccCCCccEEEEEeccceEEEEEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHhCCCCcccCHHHHH
Confidence 33444311100 0011100112345678999999999999999999864 999999999999987542110
Q ss_pred ------------CCC-------------------CCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 266 ------------ADP-------------------LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 266 ------------~~~-------------------~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
.++ +..+++|++.|+||.+.|+||++|++.+|+|++|+++ +++.++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~t~~~~~i~gG~~~NviP~~~~~~~d~R~~p~~~-~~i~~~i~ 318 (426)
T PRK07906 240 FLDGVAELTGLEFDPDDPDALLAKLGPAARMVGATLRNTANPTMLKAGYKVNVIPGTAEAVVDGRFLPGRE-EEFLATVD 318 (426)
T ss_pred HHHHhhhhcCcccCcccHHHHHHHHhhcCcchhhhhcccccceeEeccCccccCCCceEEEEEEeECCCCc-HHHHHHHH
Confidence 000 0146999999999999999999999999999999987 67777776
Q ss_pred h
Q 021176 315 E 315 (316)
Q Consensus 315 ~ 315 (316)
+
T Consensus 319 ~ 319 (426)
T PRK07906 319 E 319 (426)
T ss_pred H
Confidence 5
No 33
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=100.00 E-value=4.9e-39 Score=303.22 Aligned_cols=248 Identities=20% Similarity=0.290 Sum_probs=201.8
Q ss_pred HHHHHHHHHhhcCCCCC---cchHHHHHHHHHHHHhcCCceEecc---C--------CceEEEEEcCCCCcEEEEEeecC
Q 021176 55 GWMIGIRRKIHQNPELG---YQEFETSQLIRSELDKMGIKYKHPV---A--------VTGVVGFIGTGEPPFVALRADMD 120 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~---~--------~~~via~~~~~~~~~i~l~~H~D 120 (316)
+++++++++|++|||+| .+|.++++||+++|+++|+++++.. + ++|+++..++++ |+|+|+||+|
T Consensus 6 ~~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ill~~HlD 84 (394)
T PRK08651 6 FDIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNEYVKKHDGPRPNLIARRGSGN-PHLHFNGHYD 84 (394)
T ss_pred HHHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCccccccccCCcceEEEEeCCCC-ceEEEEeeee
Confidence 78999999999999998 5678999999999999999887532 1 235677665444 8999999999
Q ss_pred CCCCcccCCCc---ccC-CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccc
Q 021176 121 SLPLQEMVEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (316)
Q Consensus 121 vvp~~~~~~w~---~~~-~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~ 192 (316)
|||+++.. |. |.. .+||++||||+ |++++++|+|++.+++.+ +++|.|+|+++|| |+.|++++++++.
T Consensus 85 tvp~~~~~-~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~---~~~v~~~~~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 85 VVPPGEGW-SVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG---DGNIELAIVPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred eecCCCCc-cccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC---CCCEEEEEecCccccchhHHHHHhccC
Confidence 99987532 44 443 36899999997 899999999999998765 7899999999999 6689999998875
Q ss_pred cccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC------
Q 021176 193 LEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA------ 266 (316)
Q Consensus 193 ~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~------ 266 (316)
++ +|+++.. ++... +.+. .+++|..+++|+++|+++|++.|+.|.||+..|++++..|++...+..
T Consensus 161 ~~-~d~~i~~--~~~~~-~~i~----~~~~G~~~~~i~v~G~~~H~~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~ 232 (394)
T PRK08651 161 VT-PDYVIVG--EPSGL-DNIC----IGHRGLVWGVVKVYGKQAHASTPWLGINAFEAAAKIAERLKSSLSTIKSKYEYD 232 (394)
T ss_pred CC-CCEEEEe--cCCCC-CceE----EecccEEEEEEEEEEeccccCCCccccCHHHHHHHHHHHHHHHHHhhhcccccc
Confidence 43 5666653 22211 1232 245799999999999999999999999999999999999986532111
Q ss_pred -CCCCCceEEEEE--EEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 267 -DPLDSQVVTVAK--FQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 267 -~~~~~~t~~i~~--i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.....++++++. |+||.+.|+||++|++.+|+|++|..+++++.+++++
T Consensus 233 ~~~~~~~~~~ig~~~i~gG~~~nviP~~a~~~~diR~~~~~~~e~i~~~i~~ 284 (394)
T PRK08651 233 DERGAKPTVTLGGPTVEGGTKTNIVPGYCAFSIDRRLIPEETAEEVRDELEA 284 (394)
T ss_pred ccccCCCceeecceeeeCCCCCCccCCEEEEEEEeeeCCCCCHHHHHHHHHH
Confidence 113456889998 9999999999999999999999999999999998875
No 34
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=100.00 E-value=1.3e-38 Score=295.54 Aligned_cols=238 Identities=15% Similarity=0.138 Sum_probs=195.5
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcccC
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKS 134 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~ 134 (316)
+++++++++|++|||++++|.++++|+.++|+++|++++.. ...|++++++++ +|+|+|+||+||||... |+ .
T Consensus 6 ~~~~~~l~~Lv~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~i~~~~~~-~~~l~~~~H~DtVp~~~----p~-~ 78 (348)
T PRK04443 6 LEARELLKGLVEIPSPSGEEAAAAEFLVEFMESHGREAWVD-EAGNARGPAGDG-PPLVLLLGHIDTVPGDI----PV-R 78 (348)
T ss_pred HHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEcCCC-CCEEEEEeeccccCCCC----Cc-E
Confidence 67999999999999999999999999999999999998764 346899998544 48999999999999532 34 2
Q ss_pred CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCc
Q 021176 135 KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPI 210 (316)
Q Consensus 135 ~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~ 210 (316)
++||++||||+ ||++++++.|+++| +.+++++|.|++++||| ++.|...++.++. .+|++++.+ |+
T Consensus 79 ~~~g~iyGrG~~D~Kg~~aa~l~A~~~l---~~~~~~~i~~~~~~dEE~g~~~~~~~l~~~~--~~d~~iv~E-----pt 148 (348)
T PRK04443 79 VEDGVLWGRGSVDAKGPLAAFAAAAARL---EALVRARVSFVGAVEEEAPSSGGARLVADRE--RPDAVIIGE-----PS 148 (348)
T ss_pred eeCCeEEeecccccccHHHHHHHHHHHh---cccCCCCEEEEEEcccccCChhHHHHHHhcc--CCCEEEEeC-----CC
Confidence 56899999997 89999999999998 34689999999999999 6666666666553 567777632 22
Q ss_pred ceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhh---ccCCCCCCceEEEEEEEcCCcCce
Q 021176 211 GEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVS---READPLDSQVVTVAKFQGGGAFNV 287 (316)
Q Consensus 211 g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~---~~~~~~~~~t~~i~~i~gg~~~nv 287 (316)
+.- ....+++|..+++++++|+++|||.| +.||+..|++++..|+++.. .....+..+++|++.|+ ...|+
T Consensus 149 ~~~--~i~~~~kG~~~~~l~~~G~~~Hss~~--g~NAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~i~~i~--~~~n~ 222 (348)
T PRK04443 149 GWD--GITLGYKGRLLVTYVATSESFHSAGP--EPNAAEDAIEWWLAVEAWFEANDGRERVFDQVTPKLVDFD--SSSDG 222 (348)
T ss_pred Ccc--ceeeecccEEEEEEEEEeCCCccCCC--CCCHHHHHHHHHHHHHHHHhcCccccccccccceeeeEEe--cCCCC
Confidence 211 11235689999999999999999987 79999999999999987643 11123455788999988 35699
Q ss_pred eCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 288 IPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 288 iP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
||++|++.+|+|++|+++.+++.++|++
T Consensus 223 iP~~~~~~~d~R~~p~~~~~~i~~~i~~ 250 (348)
T PRK04443 223 LTVEAEMTVGLRLPPGLSPEEAREILDA 250 (348)
T ss_pred CCceEEEEEEEccCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999876
No 35
>PRK08737 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.4e-38 Score=296.63 Aligned_cols=237 Identities=16% Similarity=0.182 Sum_probs=191.7
Q ss_pred HHHHHHHHHhhcCCCCC----cchHHHHHHHHHHHHhcCCceEec---cCCceEEEEEcCCCCcEEEEEeecCCCCCccc
Q 021176 55 GWMIGIRRKIHQNPELG----YQEFETSQLIRSELDKMGIKYKHP---VAVTGVVGFIGTGEPPFVALRADMDSLPLQEM 127 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s----~~e~~~~~~l~~~l~~~G~~~~~~---~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~ 127 (316)
+++++++++|++|||.+ .+|.++++|++++|+ |++++.. +++.|+++..+ +|+|+|+||+||||+++
T Consensus 6 ~~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~~~~~nli~~~g---~~~lll~gH~DtVp~~~- 79 (364)
T PRK08737 6 ESTLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHGAGAVSLYAVRG---TPKYLFNVHLDTVPDSP- 79 (364)
T ss_pred HHHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCCCCceEEEEEcC---CCeEEEEeeeCCCCCCC-
Confidence 67899999999999985 357899999999997 8887753 24568888642 37899999999999864
Q ss_pred CCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Cc-ccHHHHHHccccccccE
Q 021176 128 VEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GG-GGAHKVLEAGVLEKVNA 198 (316)
Q Consensus 128 ~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~-~G~~~~~~~~~~~~~d~ 198 (316)
.|.++ .++||++||||+ |++++++++|++. +.++|.|+|++||| |+ .|++.+++.+. +.|+
T Consensus 80 -~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~-------~~~~v~~~~~~dEE~g~~~g~~~~~~~~~--~~~~ 149 (364)
T PRK08737 80 -HWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA-------GDGDAAFLFSSDEEANDPRCVAAFLARGI--PYEA 149 (364)
T ss_pred -CCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc-------cCCCEEEEEEcccccCchhhHHHHHHhCC--CCCE
Confidence 68554 356899999997 8999999999864 35689999999999 65 58889988764 4677
Q ss_pred EEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCC-CCCCCHHHHHHHHHHHHHHhh-hcc---CCCCCCce
Q 021176 199 IFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIP-QHSIDPILAASNVIVSLQHLV-SRE---ADPLDSQV 273 (316)
Q Consensus 199 ~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p-~~g~Nai~~~~~~i~~l~~~~-~~~---~~~~~~~t 273 (316)
+++. +|++.. ...+++|..+++++++|+++|+|.| +.|.||+..+++++..+.+.. .+. ......++
T Consensus 150 ~iv~-----Ept~~~---~~~~~kG~~~~~v~v~Gk~aHas~p~~~G~NAI~~~~~~l~~~~~~~~~~~~~~~~~~~~~t 221 (364)
T PRK08737 150 VLVA-----EPTMSE---AVLAHRGISSVLMRFAGRAGHASGKQDPSASALHQAMRWGGQALDHVESLAHARFGGLTGLR 221 (364)
T ss_pred EEEc-----CCCCce---eEEecceeEEEEEEEEeeccccCCCcccCCCHHHHHHHHHHHHHHHHHhhhhhccCCCCCCc
Confidence 7752 333321 1245789999999999999999987 689999999999998865442 111 12233569
Q ss_pred EEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 274 VTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 274 ~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|++.|+||.+.|+||++|++++|+|+.|+++.+++.++|++
T Consensus 222 ~~vg~i~GG~~~NvVP~~a~~~~d~R~~p~~~~e~v~~~i~~ 263 (364)
T PRK08737 222 FNIGRVEGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAG 263 (364)
T ss_pred eEEeeEecCCCCCcCCCceEEEEEeeeCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999998864
No 36
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=100.00 E-value=1.7e-38 Score=294.65 Aligned_cols=232 Identities=15% Similarity=0.125 Sum_probs=192.4
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcccC
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKS 134 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~ 134 (316)
+++++++++|++|||++++|.++++||+++|+++|+++++.+ ..|++. . + +|+|+|+||+||||. |....
T Consensus 10 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~-~~~~~~--~-g-~~~lll~gH~DtVp~-----~~~~~ 79 (346)
T PRK00466 10 QKAKELLLDLLSIYTPSGNETNATKFFEKISNELNLKLEILP-DSNSFI--L-G-EGDILLASHVDTVPG-----YIEPK 79 (346)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEEec-CCCcEe--c-C-CCeEEEEeccccCCC-----CCCce
Confidence 578899999999999999999999999999999999988643 345553 1 2 368999999999994 22234
Q ss_pred CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCc
Q 021176 135 KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPI 210 (316)
Q Consensus 135 ~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~ 210 (316)
.+||++||||+ ||+++++++|+++|++.+ .++.|+|++||| ++.|++++++++. ++|++++. +|+
T Consensus 80 ~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~----~~i~~~~~~dEE~g~~G~~~l~~~~~--~~d~~i~~-----ep~ 148 (346)
T PRK00466 80 IEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG----IKVMVSGLADEESTSIGAKELVSKGF--NFKHIIVG-----EPS 148 (346)
T ss_pred eeCCEEEecCccccchHHHHHHHHHHHHHHcC----CCEEEEEEcCcccCCccHHHHHhcCC--CCCEEEEc-----CCC
Confidence 67899999997 899999999999998865 358999999999 6689999998763 46777652 333
Q ss_pred ceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCC
Q 021176 211 GEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPD 290 (316)
Q Consensus 211 g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~ 290 (316)
+.. ....+++|..+++|+++|+++|+|.|+ .||+..|++++..|.+... ....+++|++.|+||...|+||+
T Consensus 149 ~~~--~i~~~~kG~~~~~i~v~G~~~Has~p~--~nAi~~~~~~l~~l~~~~~----~~~~~t~~~~~i~gG~~~NvvP~ 220 (346)
T PRK00466 149 NGT--DIVVEYRGSIQLDIMCEGTPEHSSSAK--SNLIVDISKKIIEVYKQPE----NYDKPSIVPTIIRAGESYNVTPA 220 (346)
T ss_pred CCC--ceEEEeeEEEEEEEEEEeeccccCCCC--cCHHHHHHHHHHHHHhccc----cCCCCcceeeEEecCCcCcccCC
Confidence 321 112347899999999999999999885 5999999999999876531 23347899999999999999999
Q ss_pred eEEEEEEEeccChhcHHHHHHHHhh
Q 021176 291 SVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 291 ~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|++.+|+|++|+.+.+++.+++++
T Consensus 221 ~a~~~~diR~~p~~~~~~v~~~i~~ 245 (346)
T PRK00466 221 KLYLHFDVRYAINNKRDDLISEIKD 245 (346)
T ss_pred ceEEEEEEEeCCCCCHHHHHHHHHH
Confidence 9999999999999999999999875
No 37
>PRK08652 acetylornithine deacetylase; Provisional
Probab=100.00 E-value=1.8e-38 Score=294.30 Aligned_cols=238 Identities=18% Similarity=0.164 Sum_probs=195.4
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccC--CceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcc
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVA--VTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEY 132 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~ 132 (316)
+++++++++|++|||+|++|.++++||.++|+++|++++.... ..|+++ +++|+|+|+||+||||.+.. +
T Consensus 2 ~~~~~~~~~lv~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~i~l~~H~D~vp~~~~---~- 73 (347)
T PRK08652 2 ERAKELLKQLVKIPSPSGQEDEIALHIMEFLESLGYDVHIESDGEVINIVV----NSKAELFVEVHYDTVPVRAE---F- 73 (347)
T ss_pred hhHHHHHHHHhcCCCCCCchHHHHHHHHHHHHHcCCEEEEEecCceeEEEc----CCCCEEEEEccccccCCCCC---C-
Confidence 5689999999999999999999999999999999999876332 345655 33589999999999997531 1
Q ss_pred cCCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCC
Q 021176 133 KSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNL 208 (316)
Q Consensus 133 ~~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~ 208 (316)
..+||++||||+ |++++++|+|++.|++.. .+++|.|+|++||| |+.|++.++++. ..|+++..+ ++.
T Consensus 74 -~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~~--~~~~v~~~~~~dEE~g~~G~~~~~~~~---~~d~~i~~e--p~~ 145 (347)
T PRK08652 74 -FVDGVYVYGTGACDAKGGVAAILLALEELGKEF--EDLNVGIAFVSDEEEGGRGSALFAERY---RPKMAIVLE--PTD 145 (347)
T ss_pred -EEECCEEEeccchhhhHHHHHHHHHHHHHhhcc--cCCCEEEEEecCcccCChhHHHHHHhc---CCCEEEEec--CCC
Confidence 246799999997 899999999999998643 46799999999999 778999998763 236666543 321
Q ss_pred CcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCcee
Q 021176 209 PIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVI 288 (316)
Q Consensus 209 ~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nvi 288 (316)
+.+ ..+++|..+++++++|+++|++.|+.|.||+..+++++..|+++........ .++++++.|+||...|+|
T Consensus 146 --~~i----~~~~~g~~~~~i~~~G~~~H~s~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~-~~~~~~~~i~gg~~~nvi 218 (347)
T PRK08652 146 --LKV----AIAHYGNLEAYVEVKGKPSHGACPESGVNAIEKAFEMLEKLKELLKALGKYF-DPHIGIQEIIGGSPEYSI 218 (347)
T ss_pred --Cce----eeecccEEEEEEEEEeeecccCCCCcCcCHHHHHHHHHHHHHHHHHhhhccc-CCCCcceeeecCCCCCcc
Confidence 222 2456899999999999999999999999999999999999988753321111 246788889999999999
Q ss_pred CCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 289 PDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 289 P~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|++|++.+|+|++|..+.+++.+++++
T Consensus 219 P~~~~~~~diR~~~~~~~~~v~~~i~~ 245 (347)
T PRK08652 219 PALCRLRLDARIPPEVEVEDVLDEIDP 245 (347)
T ss_pred CCcEEEEEEEEcCCCCCHHHHHHHHHH
Confidence 999999999999999999999999875
No 38
>PRK07079 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=303.39 Aligned_cols=266 Identities=14% Similarity=0.100 Sum_probs=202.0
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcc---hHHHHHHHH----HHHHhcCCceEec-----cCCceEEEEEcCC
Q 021176 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQ---EFETSQLIR----SELDKMGIKYKHP-----VAVTGVVGFIGTG 108 (316)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~---e~~~~~~l~----~~l~~~G~~~~~~-----~~~~~via~~~~~ 108 (316)
.+++.++++. +++++++++|++|||+|++ +.++++|++ ++|+++|++++.. .+++||++.++++
T Consensus 7 ~~~~~~~~~~----~~~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~~~~~~~vva~~~~~ 82 (469)
T PRK07079 7 IARAAAYFDS----GAFFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPVAGGGPFLIAERIED 82 (469)
T ss_pred HHHHHHhhcc----HHHHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCCCCEEEEEeCCC
Confidence 3455566554 4699999999999999963 456777764 5899999998752 2467999998543
Q ss_pred -CCcEEEEEeecCCCCCcccCCCc-----cc-CCCCCeeeecCc---hHHHHHHHHHHHHHHhc-cccCCceEEEEEecC
Q 021176 109 -EPPFVALRADMDSLPLQEMVEWE-----YK-SKIPGKMHACGH---DGHVTMLLGAAKILQEH-REELKGTVVLVFQPA 177 (316)
Q Consensus 109 -~~~~i~l~~H~Dvvp~~~~~~w~-----~~-~~~~g~l~grG~---k~~~a~~l~a~~~l~~~-~~~~~~~i~~~~~~~ 177 (316)
++|+|+|+||+||||+++ ++|. |. .++||++||||+ ||+++++|+|++++++. +..++++|.|+|++|
T Consensus 83 ~~~~~lll~gH~DvVp~~~-~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~~~i~~~~~~d 161 (469)
T PRK07079 83 DALPTVLIYGHGDVVRGYD-EQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLGFNVKLLIEMG 161 (469)
T ss_pred CCCCEEEEEcccCCCCCCh-HHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCCCCEEEEEECc
Confidence 458999999999999754 4575 33 367899999997 99999999999998754 467899999999999
Q ss_pred CC-CcccHHHHHHcccc-ccccEEEEeccCCCCC-cceeEeecccccccceEEEEEEEec--CCCCCC-CCCCCCHHHHH
Q 021176 178 EE-GGGGAHKVLEAGVL-EKVNAIFGLHVDPNLP-IGEVASRPGPLLAGSGFFEAVIGGK--GGHAAI-PQHSIDPILAA 251 (316)
Q Consensus 178 EE-g~~G~~~~~~~~~~-~~~d~~~~~~~~~~~~-~g~~~~~~~~~~~G~~~~~i~v~G~--~~Hs~~-p~~g~Nai~~~ 251 (316)
|| |+.|+++++++... -..|++++. ++... .+.. ....+++|..+++|+++|+ +.||+. ...+.||+..+
T Consensus 162 EE~g~~G~~~l~~~~~~~~~~d~~iv~--e~~~~~~~~~--~i~~g~kG~~~~~v~v~G~~~~~hs~~~~g~~~nai~~l 237 (469)
T PRK07079 162 EEIGSPGLAEVCRQHREALAADVLIAS--DGPRLSAERP--TLFLGSRGAVNFRLRVNLRDGAHHSGNWGGLLRNPGTVL 237 (469)
T ss_pred cccCCccHHHHHHHhHHhcCCCEEEEe--CCCccCCCCe--EEEEecceEEEEEEEEeeCCCCCCCCccccccCCHHHHH
Confidence 99 77999999986521 136777763 33211 1111 1234578999999999997 456663 23457999999
Q ss_pred HHHHHHHHHhhhcc------------------------C--------------------CCCCCceEEEEEEEcCC---c
Q 021176 252 SNVIVSLQHLVSRE------------------------A--------------------DPLDSQVVTVAKFQGGG---A 284 (316)
Q Consensus 252 ~~~i~~l~~~~~~~------------------------~--------------------~~~~~~t~~i~~i~gg~---~ 284 (316)
+++|..|.+...+. . ..+..+++|++.|+||. .
T Consensus 238 ~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nv~~i~gG~~~~~ 317 (469)
T PRK07079 238 AHAIASLVDARGRIQVPGLRPPPLPAAVRAALADITVGGGPGDPAIDPDWGEPGLTPAERVFGWNTLEVLAFKTGNPDAP 317 (469)
T ss_pred HHHHHHhCCCCCCEecCCccCCCCCHHHHHHHHhCCCchhhhccCcccccCCCCcCHHHHHhhCCceEEEeeecCCCCCc
Confidence 99999885421000 0 01234689999999994 5
Q ss_pred CceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 285 FNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 285 ~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.|+||++|++++|+|++|+++++++.++|++
T Consensus 318 ~NvVP~~a~~~vdiR~~P~~~~e~v~~~l~~ 348 (469)
T PRK07079 318 VNAIPGSARAVCQLRFVVGTDWENLAPHLRA 348 (469)
T ss_pred ceEecCceEEEEEEEcCCCCCHHHHHHHHHH
Confidence 8999999999999999999999999999875
No 39
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=100.00 E-value=1.5e-37 Score=298.43 Aligned_cols=257 Identities=17% Similarity=0.142 Sum_probs=196.5
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhcCCCCCc------------chHHHHHHHHHHHHhcCCceEeccCCceEEEEE-cCCCC
Q 021176 44 LLNFAKRQELVGWMIGIRRKIHQNPELGY------------QEFETSQLIRSELDKMGIKYKHPVAVTGVVGFI-GTGEP 110 (316)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~ips~s~------------~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~-~~~~~ 110 (316)
+.+++++++ +++++++++|++|||++. ++.++++|+.++|+++||+++..+ |+++.+ .++++
T Consensus 4 ~~~~i~~~~--~~~~~~l~~lv~ipS~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~~~---~~~~~~~~~~~~ 78 (466)
T TIGR01886 4 FKEEVEARK--DALLEDLEELLRIDSSEDLENATEEYPFGPGPVDALTKFLSFAERDGFTTKNFD---NYAGHVEYGAGD 78 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhCCCCcCCCCCCCccCCCChhHHHHHHHHHHHHHHCCCeEEEec---CCceeEEecCCC
Confidence 456777777 899999999999999974 346789999999999999987543 233333 22335
Q ss_pred cEEEEEeecCCCCCcccCCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 021176 111 PFVALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (316)
Q Consensus 111 ~~i~l~~H~Dvvp~~~~~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~ 182 (316)
|+|+|+||+||||+++ +|.++ .++||++||||+ ||+++++|+|+++|++.+..++++|+|+|++||| |+.
T Consensus 79 ~~l~~~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~ 156 (466)
T TIGR01886 79 ERLGIIGHMDVVPAGE--GWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWV 156 (466)
T ss_pred CEEEEEeecccCCCCC--CCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcc
Confidence 8999999999999974 58654 357899999997 8999999999999999998999999999999999 778
Q ss_pred cHHHHHHccccccccEEEEeccCCCCCc-----ceeE----ee-----------------------------c-------
Q 021176 183 GAHKVLEAGVLEKVNAIFGLHVDPNLPI-----GEVA----SR-----------------------------P------- 217 (316)
Q Consensus 183 G~~~~~~~~~~~~~d~~~~~~~~~~~~~-----g~~~----~~-----------------------------~------- 217 (316)
|++++++++. ..|++++. +.+.|. |... .+ .
T Consensus 157 g~~~~~~~~~--~~d~~~~~--d~~~~~~~ge~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~i~~~~~~~~ 232 (466)
T TIGR01886 157 DMDYYFKHEE--TPDFGFSP--DAEFPIINGEKGNFTLELSFKGDNKGDYVLDSFKAGLAENMVPQVARAVISGPDAEAL 232 (466)
T ss_pred cHHHHHhcCc--CCCEEEEC--CCCceeEEEecceEEEEEEEecCCCCceeEEEEEcCCcCCccCCeeEEEEecCCHHHH
Confidence 9999998764 24555432 211110 0000 00 0
Q ss_pred ------ccccccce---------EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHH----------HHhhh---------
Q 021176 218 ------GPLLAGSG---------FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSL----------QHLVS--------- 263 (316)
Q Consensus 218 ------~~~~~G~~---------~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l----------~~~~~--------- 263 (316)
..+++|.. |++|+++|+++|+|.|+.|+||+..|++++..+ +.+..
T Consensus 233 ~~~~~~~~~~kg~~~~~~~~~~~~~~i~v~G~~aH~s~P~~G~NAi~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~ 312 (466)
T TIGR01886 233 KAAYESFLADKASLDGSFEINDESATIVLIGKGAHGAAPQVGINSATFLALFLNQYAFAGGAKNFIHFLAEVEHEDFYGE 312 (466)
T ss_pred HHHHHHHHhhccCceEEEEEeCCEEEEEEEeeEcccCCCCCCcCHHHHHHHHHHhccCChhHHHHHHHHHHhcCCCCCcc
Confidence 01244443 789999999999999999999999999988773 22110
Q ss_pred -----ccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 264 -----READPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 264 -----~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
...+.+..+|+|++.|+||.. | ++|++.+|+|++|+++.+++.++|++
T Consensus 313 ~~~~~~~~~~~g~~S~nvgvI~gG~~-~---~~~~l~iD~R~~Pge~~eev~~eI~~ 365 (466)
T TIGR01886 313 KLGIAFHDELMGDLAMNAGMFDFDHA-N---KESKLLLNFRYPQGTSPETMQKQVLD 365 (466)
T ss_pred cCCCcccccCcCceEEEeEEEEEecC-C---ceEEEEEEEecCCCCCHHHHHHHHHH
Confidence 011234567999999999965 3 79999999999999999999999875
No 40
>PRK07205 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-37 Score=295.94 Aligned_cols=254 Identities=15% Similarity=0.143 Sum_probs=189.3
Q ss_pred HHHHHHHHHhhcCCCCCcch----------HHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCC
Q 021176 55 GWMIGIRRKIHQNPELGYQE----------FETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL 124 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e----------~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~ 124 (316)
+++++++++|++|||+++++ .++++|+.++|+++||+++..+...+++++++.+ +|+|+|+||+||||+
T Consensus 11 ~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~g~~-~~~lll~gH~DvVp~ 89 (444)
T PRK07205 11 DACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDPKGYYGYAEIGQG-EELLAILCHLDVVPE 89 (444)
T ss_pred HHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcCCCeEEEEEecCC-CcEEEEEEeeccCCC
Confidence 78999999999999998754 5688999999999999987654445667777543 489999999999999
Q ss_pred cccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccc--
Q 021176 125 QEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLE-- 194 (316)
Q Consensus 125 ~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~-- 194 (316)
++.+.|.+++ ++||++||||+ ||+++++|.|+++|++.+..++++|.|+|++||| ++.|++.+++.....
T Consensus 90 ~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~~~~~~ 169 (444)
T PRK07205 90 GDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDAGVQFNKRIRFIFGTDEETLWRCMNRYNEVEEQATM 169 (444)
T ss_pred CCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcccHHHHHhCCCCCCe
Confidence 8878896543 56899999997 8999999999999999988889999999999999 678898888642110
Q ss_pred --ccc----EEEEec-----cCCCCCccee--------Eeeccc---------------ccccc----eEEEEEEEecCC
Q 021176 195 --KVN----AIFGLH-----VDPNLPIGEV--------ASRPGP---------------LLAGS----GFFEAVIGGKGG 236 (316)
Q Consensus 195 --~~d----~~~~~~-----~~~~~~~g~~--------~~~~~~---------------~~~G~----~~~~i~v~G~~~ 236 (316)
..| ..+..- .--++|+... ...+.. +++|. .+.+++++|+++
T Consensus 170 ~~~~~~~~~v~~~ekG~~~~~i~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~l~~~~~~~g~~~~~~~~~v~v~G~~~ 249 (444)
T PRK07205 170 GFAPDSSFPLTYAEKGLLQAKLVGPGSDQLELEVGQAFNVVPAKASYQGPKLEAVKKELDKLGFEYVVKENEVTVLGKSV 249 (444)
T ss_pred eECCCCCCceEEEEeceEEEEEEeCCccceEEecCCcccccCceeEEEecCHHHHHHHHHhcCceEeecCcEEEEEeEEc
Confidence 011 111000 0001111110 000000 11231 234899999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhh-----hc--------------cCC-CCCCceEEEEEEEcCCcCceeCCeEEEEE
Q 021176 237 HAAIPQHSIDPILAASNVIVSLQHLV-----SR--------------EAD-PLDSQVVTVAKFQGGGAFNVIPDSVLIGG 296 (316)
Q Consensus 237 Hs~~p~~g~Nai~~~~~~i~~l~~~~-----~~--------------~~~-~~~~~t~~i~~i~gg~~~nviP~~a~~~~ 296 (316)
|+|.|+.|.||+..+++++..+++.. .+ ..+ ....+++|++.+ |+||++|++.+
T Consensus 250 Hss~p~~g~nAi~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~nvg~~------nvvP~~a~~~l 323 (444)
T PRK07205 250 HAKDAPQGINAVIRLAKALVVLEPHPALDFLANVIGEDATGLNIFGDIEDEPSGKLSFNIAGL------TITKEKSEIRI 323 (444)
T ss_pred ccCCCccCcCHHHHHHHHHHhccHHHHHHHHHHhcCCCCccccCCccccCCCcCCceEEeEEE------EEECCEEEEEE
Confidence 99999999999999999998886421 00 001 234678888764 89999999999
Q ss_pred EEeccChhcHHHHHHHHhh
Q 021176 297 TFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 297 d~R~~p~~~~~~v~~~l~~ 315 (316)
|+|++|+++.+++.++|++
T Consensus 324 d~R~~p~~~~e~v~~~i~~ 342 (444)
T PRK07205 324 DIRIPVLADKEKLVQQLSQ 342 (444)
T ss_pred EEeCCCCCCHHHHHHHHHH
Confidence 9999999999999999875
No 41
>KOG2276 consensus Metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-38 Score=279.49 Aligned_cols=270 Identities=20% Similarity=0.242 Sum_probs=218.0
Q ss_pred hHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCcch------HHHHHHHHHHHHhcCCceEec-------------cCCceE
Q 021176 41 PKKLLNFAKRQELVGWMIGIRRKIHQNPELGYQE------FETSQLIRSELDKMGIKYKHP-------------VAVTGV 101 (316)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~-------------~~~~~v 101 (316)
..+++++++.++ ++++..|++.++|+|+|.+. .++++|++++|+++|-.++.. +..+.+
T Consensus 4 l~~~fq~id~~~--de~~~~L~e~v~iqsvs~dp~~r~~v~rm~~~~~~~l~~lG~~~~l~dlg~q~~~~g~~v~lPpvv 81 (473)
T KOG2276|consen 4 LTKVFQSIDLNK--DEFINTLREAVAIQSVSADPTKRLEVRRMADWLRDYLTKLGAPLELVDLGYQSLPDGQIVPLPPVV 81 (473)
T ss_pred HHHHHHHhhccH--HHHHHHHHHHhcccccccCccccHHHHHHHHHHHHHHHHhCCceeeeecccCCCCCCcccccChhh
Confidence 467899999999 99999999999999998753 679999999999999766631 123457
Q ss_pred EEEEcCCC-CcEEEEEeecCCCCCcccCCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEE
Q 021176 102 VGFIGTGE-PPFVALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLV 173 (316)
Q Consensus 102 ia~~~~~~-~~~i~l~~H~Dvvp~~~~~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~ 173 (316)
++++|+++ ++++++|||+||||++.+++|.++ +.+||++||||+ ||+++++++|++++++.++.++.||+|+
T Consensus 82 l~~~Gsdp~KktvlvYgHlDVqpA~~~DgW~TdPF~Lt~~~GkL~GRG~TDdkGPv~~wi~av~a~~~~g~~lpvnv~f~ 161 (473)
T KOG2276|consen 82 LGVLGSDPSKKTVLVYGHLDVQPANLEDGWNTDPFTLTEDDGKLFGRGATDDKGPVLSWIHAVKALQQLGIDLPVNVVFV 161 (473)
T ss_pred hhcccCCCCcceEEEEeeeeeeecCCCCCCcCCCeEEEEECCEEeccCcCCCCccchHHHHHHHHHHHhCccccceEEEE
Confidence 78887775 689999999999999989999766 467899999998 7999999999999999999999999999
Q ss_pred EecCCC-CcccHHHHHH---ccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEe--cCCCCC-CCCCCCC
Q 021176 174 FQPAEE-GGGGAHKVLE---AGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGG--KGGHAA-IPQHSID 246 (316)
Q Consensus 174 ~~~~EE-g~~G~~~~~~---~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G--~~~Hs~-~p~~g~N 246 (316)
|.++|| |+.|...+++ +.++.++|++++ .++.+.|+-.....++.+|.+.+.++|+| +..||| .+....-
T Consensus 162 ~EgmEEsgS~~L~~l~~~~kD~~~~~vD~vci---SdnyWlg~kkPcltyGlRG~~yf~i~v~g~~~DlHSGvfGG~~hE 238 (473)
T KOG2276|consen 162 FEGMEESGSEGLDELIEKEKDKFFKDVDFVCI---SDNYWLGTKKPCLTYGLRGVIYFQIEVEGPSKDLHSGVFGGVVHE 238 (473)
T ss_pred EEechhccCccHHHHHHHHhhhhhccCCEEEe---eCceeccCCCcccccccccceeEEEEEeecccccccccccchhHH
Confidence 999999 7778887775 346678998875 44566666555556667899999999999 788998 4433334
Q ss_pred HHHHHHHHHHHHHHhhhccC------------------------------------------------CCCCCceEEEEE
Q 021176 247 PILAASNVIVSLQHLVSREA------------------------------------------------DPLDSQVVTVAK 278 (316)
Q Consensus 247 ai~~~~~~i~~l~~~~~~~~------------------------------------------------~~~~~~t~~i~~ 278 (316)
|+..|..++..|.+..++-. +.|.+|++++++
T Consensus 239 ~m~dL~~~ms~Lv~~~~~Ilipgiy~~vaplteeE~~~y~~I~f~~~e~~~~tg~~~l~~~~k~~~l~~rWryPSLsihg 318 (473)
T KOG2276|consen 239 AMNDLVLVMSSLVDIQGRILIPGIYEDVAPLTEEEDSIYDDIDFDVEEFKEATGSQMLPTDDKKRILMHRWRYPSLSIHG 318 (473)
T ss_pred HHHHHHHHHHHhcCcCCcEeccchhhhccCCChHHHhhhhcceeeHhhhhccccccccccCchHHHhhhhcccCccceec
Confidence 44444445554443222200 347899999999
Q ss_pred EEcC----CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 279 FQGG----GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 279 i~gg----~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|+|. .+.++||.++.-+|.+|++|.++++.+.+.+.+
T Consensus 319 IeGaFs~pG~kTVIP~kVigkfSiRlVP~md~e~verlv~~ 359 (473)
T KOG2276|consen 319 IEGAFSGPGAKTVIPAKVVGKFSIRLVPNMDPEQVERLVTR 359 (473)
T ss_pred ccceeeCCCceEEeehhheeeeEEEecCCCCHHHHHHHHHH
Confidence 9975 388999999999999999999999998887653
No 42
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=288.67 Aligned_cols=258 Identities=24% Similarity=0.344 Sum_probs=199.0
Q ss_pred HHHHHHHHHhhcCCCCC-cchHHHHHHHHHHHHhcCCceEecc-C----CceEEEEEcCCCC-cEEEEEeecCCCCCccc
Q 021176 55 GWMIGIRRKIHQNPELG-YQEFETSQLIRSELDKMGIKYKHPV-A----VTGVVGFIGTGEP-PFVALRADMDSLPLQEM 127 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s-~~e~~~~~~l~~~l~~~G~~~~~~~-~----~~~via~~~~~~~-~~i~l~~H~Dvvp~~~~ 127 (316)
+++++++++|+++||++ ..+.++++|++++|+++|+.++... + ..|++++++++++ |+|+|+||+||||+++.
T Consensus 13 ~~~~~~l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~n~~~~~~~~~~~~~l~l~~H~DvVP~g~~ 92 (409)
T COG0624 13 DDILELLKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPGPGRPNLVARLGGGDGGPTLLLGGHLDVVPAGGG 92 (409)
T ss_pred HHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCCCCceEEEEEecCCCCCCeEEEeccccccCCCCc
Confidence 67889999999999999 8899999999999999999877532 2 4599999977654 89999999999999988
Q ss_pred CCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHcccc---ccc
Q 021176 128 VEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVL---EKV 196 (316)
Q Consensus 128 ~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~---~~~ 196 (316)
..|.++ ..+||++||||+ ||+++++++|++.+.+.+..++++|.+++++||| ++.++..++.++.. ..+
T Consensus 93 ~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 172 (409)
T COG0624 93 EDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEESGGAGGKAYLEEGEEALGIRP 172 (409)
T ss_pred ccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccccCCcchHHHHHhcchhhccCC
Confidence 889654 345689999998 8999999999999999888899999999999999 67888888876642 345
Q ss_pred cEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCC--CCCCCCHHHHHHHHHHHHHHhhhccCCC-CC-Cc
Q 021176 197 NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI--PQHSIDPILAASNVIVSLQHLVSREADP-LD-SQ 272 (316)
Q Consensus 197 d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~--p~~g~Nai~~~~~~i~~l~~~~~~~~~~-~~-~~ 272 (316)
|+++..++......+..... +++|..+++++++|+++|+|. |+.+.|++..+.+.+.++.....+.... .. ..
T Consensus 173 d~~i~~E~~~~~~~~~~~~~---~~kG~~~~~v~v~G~~~Has~~~p~~~~n~i~~a~~~~~~~~~~~~~~~~~~~~~~~ 249 (409)
T COG0624 173 DYEIVGEPTLESEGGDIIVV---GHKGSLWLEVTVKGKAGHASTTPPDLGRNPIHAAIEALAELIEELGDLAGEGFDGPL 249 (409)
T ss_pred CEEEeCCCCCcccCCCeEEE---cceeEEEEEEEEEeecccccccCCcccccHHHHHHHHHHHHHHHhcccccccccCCc
Confidence 76665332000112222222 578999999999999999997 9999995544444444443322221111 22 36
Q ss_pred eEEEEEEEcCCc--------CceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 273 VVTVAKFQGGGA--------FNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 273 t~~i~~i~gg~~--------~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+++++.+.++.. .|+||++|++.+|+|+.|..+++++.+++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~nviP~~~~~~~d~R~~p~~~~~~~~~~v~~ 300 (409)
T COG0624 250 GLNVGLILAGPGASVNGGDKVNVIPGEAEATVDIRLLPGEDLDDVLEELEA 300 (409)
T ss_pred cccccccccCCcccccCCccCceecceEEEEEEEecCCcCCHHHHHHHHHH
Confidence 777776666554 5999999999999999999997776666543
No 43
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=100.00 E-value=1.5e-36 Score=283.02 Aligned_cols=242 Identities=20% Similarity=0.224 Sum_probs=196.3
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEecc------CCceEEEEEcCC-CCcEEEEEeecCCCCCcccCC
Q 021176 57 MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------AVTGVVGFIGTG-EPPFVALRADMDSLPLQEMVE 129 (316)
Q Consensus 57 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~~via~~~~~-~~~~i~l~~H~Dvvp~~~~~~ 129 (316)
+.+++++|++|||++++|.++++||+++|+++|++++..+ +++|+++.+++. ++|+|+|.||+||||+++ .
T Consensus 2 ~~~~~~~l~~i~s~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~l~~H~D~V~~~~--~ 79 (361)
T TIGR01883 2 LKKYFLELIQIDSESGKEKAILTYLKKQITKLGIPVSLDEVPAEVSNDNNLIARLPGTVKFDTIFFCGHMDTVPPGA--G 79 (361)
T ss_pred hHHHHHHHeecCCCCCcHHHHHHHHHHHHHHcCCEEEEeccccccCCCceEEEEEeCCCCCCcEEEEeeccccCCCC--C
Confidence 6788999999999999999999999999999999987532 368999999544 458999999999999864 3
Q ss_pred CcccCCCCCeeeecCc-------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEE
Q 021176 130 WEYKSKIPGKMHACGH-------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFG 201 (316)
Q Consensus 130 w~~~~~~~g~l~grG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~ 201 (316)
|. ..+++|++||||+ |++++++|.+++.|++.+ .++++|.|+|++||| ++.|++.+.+... ..++.+.
T Consensus 80 ~~-~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~-~~~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~~~~~~ 155 (361)
T TIGR01883 80 PE-PVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEE-TPHGTIEFIFTVKEELGLIGMRLFDESKI--TAAYGYC 155 (361)
T ss_pred CC-ceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccCchhHhHhChhhc--CcceeEE
Confidence 32 2456789999994 699999999999998876 578899999999999 6679998876432 2455544
Q ss_pred eccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEE
Q 021176 202 LHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ 280 (316)
Q Consensus 202 ~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~ 280 (316)
. +++.+.+.+. .+++|..+++++++|+++|++ .|+.|+||+..+++++..|+... ....+++|++.++
T Consensus 156 ~--~~~~~~~~i~----~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nAi~~~~~~i~~l~~~~-----~~~~~~~~i~~i~ 224 (361)
T TIGR01883 156 L--DAPGEVGNIQ----LAAPTQVKVDATIAGKDAHAGLVPEDGISAISVARMAIHAMRLGR-----IDEETTANIGSFS 224 (361)
T ss_pred E--eCCCCcceEE----ecCCceEEEEEEEEeeecCCCCCcccCcCHHHHHHHHHHhccccC-----CCCccccccceee
Confidence 3 3332334433 235799999999999999986 79999999999999999886531 1123688999999
Q ss_pred cCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 281 GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 281 gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
||...|+||++|++.+|+|..|..+.+.+.+++++
T Consensus 225 gG~~~nvVP~~~~~~~diR~~~~~~~~~~~~~i~~ 259 (361)
T TIGR01883 225 GGVNTNIVQDEQLIVAEARSLSFRKAEAQVQTMRE 259 (361)
T ss_pred cCCccCccCCceEEEEEEecCCHHHHHHHHHHHHH
Confidence 99999999999999999999999888877766654
No 44
>PRK07318 dipeptidase PepV; Reviewed
Probab=100.00 E-value=2.1e-36 Score=290.90 Aligned_cols=260 Identities=18% Similarity=0.204 Sum_probs=195.9
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhcCCCCCcc------------hHHHHHHHHHHHHhcCCceEeccCCceEEEEEc-CCCC
Q 021176 44 LLNFAKRQELVGWMIGIRRKIHQNPELGYQ------------EFETSQLIRSELDKMGIKYKHPVAVTGVVGFIG-TGEP 110 (316)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~-~~~~ 110 (316)
+.+++++++ +++++++++|++|||++.+ +.++++|++++|+++|++++..+ |+++.+. +.++
T Consensus 5 ~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---n~~~~~~~~~~~ 79 (466)
T PRK07318 5 WKKEVEKRK--DDLIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---NYAGHIEYGEGE 79 (466)
T ss_pred HHHHHHHhH--HHHHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec---CccceEEECCCC
Confidence 678888888 8999999999999999865 56899999999999999987542 5555542 2234
Q ss_pred cEEEEEeecCCCCCcccCCCcccC----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 021176 111 PFVALRADMDSLPLQEMVEWEYKS----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (316)
Q Consensus 111 ~~i~l~~H~Dvvp~~~~~~w~~~~----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~ 182 (316)
|+|+|+||+||||+++ +|.+++ ++||++||||+ ||+++++++|++.|++.+..++++|.|+|++||| |+.
T Consensus 80 ~~l~l~gH~DvVp~~~--~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~~~~i~l~~~~DEE~g~~ 157 (466)
T PRK07318 80 EVLGILGHLDVVPAGD--GWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPLSKKVRFIVGTDEESGWK 157 (466)
T ss_pred CEEEEEEecCCCCCCC--CCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCCCccEEEEEEcccccCch
Confidence 7999999999999974 585543 46899999997 8999999999999999888888999999999999 778
Q ss_pred cHHHHHHcccccc----cc----EEEEec----------------------cCCCCCccee------Eee----------
Q 021176 183 GAHKVLEAGVLEK----VN----AIFGLH----------------------VDPNLPIGEV------ASR---------- 216 (316)
Q Consensus 183 G~~~~~~~~~~~~----~d----~~~~~~----------------------~~~~~~~g~~------~~~---------- 216 (316)
|++++++...... .| ++++.. ..++.+++.+ ...
T Consensus 158 G~~~l~~~~~~~~~~~~~d~~~~vi~~E~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~ 237 (466)
T PRK07318 158 CMDYYFEHEEAPDFGFSPDAEFPIINGEKGITTFDLVHFEGENEGDYVLVSFKSGLRENMVPDSAEAVITGDDLDDLIAA 237 (466)
T ss_pred hHHHHHHhCCCCCEEEEeCCCCcEEEEEeeeEEEEEEeccccCCCCceeEEEEcCccceecCcccEEEEecCCHHHHHHH
Confidence 9999998643110 11 111100 0001011100 000
Q ss_pred -----cccccccc-----eEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHh------h----h-------------
Q 021176 217 -----PGPLLAGS-----GFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHL------V----S------------- 263 (316)
Q Consensus 217 -----~~~~~~G~-----~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~------~----~------------- 263 (316)
...+++|. .|++|+++|+++|++.|+.|.|||..|++++..|+.. . .
T Consensus 238 ~~~~~~~~~~kG~~~~~~~~~~i~v~G~aaH~s~p~~g~NAI~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (466)
T PRK07318 238 FEAFLAENGLKGELEEEGGKLVLTVIGKSAHGSTPEKGVNAATYLAKFLNQLNLDGDAKAFLDFAAEYLHEDTRGEKLGI 317 (466)
T ss_pred HHHHHhhcCceEEEEecCCEEEEEEEeeEcccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCCcccCCC
Confidence 00134554 4799999999999999999999999999999998641 0 0
Q ss_pred -ccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 264 -READPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 264 -~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
......+..|+|++.|+||... +|++.+|+|+.|+.+.+++.++|++
T Consensus 318 ~~~~~~~g~~t~nvg~i~gg~~~-----~~~~~iDiR~~p~~~~~~v~~~i~~ 365 (466)
T PRK07318 318 AYEDDVMGDLTMNVGVFSFDEEK-----GGTLGLNFRYPVGTDFEKIKAKLEK 365 (466)
T ss_pred cccCCCccCeEEEeeEEEEecCc-----EEEEEEEEeCCCCCCHHHHHHHHHH
Confidence 0011234579999999988532 7999999999999999999999875
No 45
>PRK06156 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-35 Score=288.30 Aligned_cols=291 Identities=15% Similarity=0.173 Sum_probs=207.3
Q ss_pred hhhHHHHHHHHHhcCCCCcccccCCCCCCCCCchhHHHHHHHHhhhhHHHHHHHHHHhhcCCCCCc-----ch----HHH
Q 021176 7 FSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELGY-----QE----FET 77 (316)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s~-----~e----~~~ 77 (316)
.||+|..+++|..++...|..-.+-+- ...+.++-..++++ +++++++++|++|||++. +| .+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~l~~lv~i~S~~~~~~~~~e~~~~~~~ 77 (520)
T PRK06156 5 LKKLLAALLLLASLSAATQAAAATLTK-----PQLDALLYARLKYG--AAAIESLRELVAFPTVRVEGVPQHENPEFIGF 77 (520)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhccc-----cccchhHHhhhhhH--HHHHHHHHHhcCcCcccCCCCCccCCccHHHH
Confidence 677887778887777665411111111 12233333344555 889999999999999974 23 356
Q ss_pred HHHHHHHHHhcCCceEeccCCceEE-EEEcCCCCcEEEEEeecCCCCCcccCCCcc-----cC----CCCCeeeecCc--
Q 021176 78 SQLIRSELDKMGIKYKHPVAVTGVV-GFIGTGEPPFVALRADMDSLPLQEMVEWEY-----KS----KIPGKMHACGH-- 145 (316)
Q Consensus 78 ~~~l~~~l~~~G~~~~~~~~~~~vi-a~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~-----~~----~~~g~l~grG~-- 145 (316)
++||.++|+++|++++.. ..+++ +.+++.+.|+|+|+|||||||++. .+|.+ ++ ++||++||||+
T Consensus 78 ~~~l~~~l~~~G~~~~~~--~~~v~~~~~~g~~~~~l~l~gH~DvVp~~~-~~W~~~~~~~~Pf~~~~~~g~lyGRG~~D 154 (520)
T PRK06156 78 KKLLKSLARDFGLDYRNV--DNRVLEIGLGGSGSDKVGILTHADVVPANP-ELWVLDGTRLDPFKVTLVGDRLYGRGTED 154 (520)
T ss_pred HHHHHHHHHHCCCeEEec--CCeEEEEEecCCCCCeEEEEEecCccCCCC-ccCccCCccCCCCceEEECCEEEEcCccc
Confidence 799999999999988642 23344 677644458999999999999965 46876 53 35899999997
Q ss_pred -hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEec-------cCCCC--------
Q 021176 146 -DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLH-------VDPNL-------- 208 (316)
Q Consensus 146 -k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~-------~~~~~-------- 208 (316)
|++++++++|+++|++.+.+++++|.|+|++||| |+.|+++++.++.. .+..+.++ .+++.
T Consensus 155 ~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~~--~~~~~~~D~~~~~~~~E~~~~~~~i~~~ 232 (520)
T PRK06156 155 DKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYTP--PDYNITLDAEYPVVTAEKGWGTIMATFP 232 (520)
T ss_pred chHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcCC--CCeEEeeCCCCceEEEecceEEEEEEec
Confidence 8999999999999999888888999999999999 77899999887542 23332211 11110
Q ss_pred ------------------Ccce------eEeec-----------------ccccccce---------EEEEEEEecCCCC
Q 021176 209 ------------------PIGE------VASRP-----------------GPLLAGSG---------FFEAVIGGKGGHA 238 (316)
Q Consensus 209 ------------------~~g~------~~~~~-----------------~~~~~G~~---------~~~i~v~G~~~Hs 238 (316)
..+. ..... ..+++|.. +++|+++|+++|+
T Consensus 233 ~~~~~~~~~~l~~~~gG~~~n~ip~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~I~v~Gk~aHs 312 (520)
T PRK06156 233 KRAADGKGAEIVAMTGGAFANQIPQTAVATLSGGDPAALAAALQAAAAAQVKRHGGGFSIDFKRDGKDVTITVTGKSAHS 312 (520)
T ss_pred CcCCCCCceeEEEEEcCCcCCCCCCccEEEEecCCHHHHHHHHHHHHHHHHhhcccCceEEEEEcCCeEEEEEEeEECCC
Confidence 0000 00000 01122433 8999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhhhc---------------------------cCCCCCCceEEEEEEEcCCcCceeCCe
Q 021176 239 AIPQHSIDPILAASNVIVSLQHLVSR---------------------------EADPLDSQVVTVAKFQGGGAFNVIPDS 291 (316)
Q Consensus 239 ~~p~~g~Nai~~~~~~i~~l~~~~~~---------------------------~~~~~~~~t~~i~~i~gg~~~nviP~~ 291 (316)
|.|+.|.||+..+++++..|++.... .....+..+++++.|++|. ++
T Consensus 313 S~P~~G~NAI~~aa~ii~~L~~~l~~~~~~~~~~~i~~~~~~~~~g~~~g~~~~~~~~g~~t~~~~~I~gg~------~~ 386 (520)
T PRK06156 313 STPESGVNPVTRLALFLQSLDGDLPHNHAADAARYINDLVGLDYLGEKFGVAYKDDFMGPLTLSPTVVGQDD------KG 386 (520)
T ss_pred CCCCCCccHHHHHHHHHHhccccccchhHHHHHHHHHHhhCCCCccCcCCccccCCCccCcEEeeeEEEEeC------Ce
Confidence 99999999999999999998752100 0011244678888888775 58
Q ss_pred EEEEEEEeccChhcHHHHHHHHhh
Q 021176 292 VLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 292 a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|++.+|+|++|+++.+++.++|++
T Consensus 387 ~~l~iDiR~~p~~~~eev~~~I~~ 410 (520)
T PRK06156 387 TEVTVNLRRPVGKTPELLKGEIAD 410 (520)
T ss_pred EEEEEEeeCCCCCCHHHHHHHHHH
Confidence 999999999999999999888875
No 46
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=100.00 E-value=1.8e-35 Score=273.31 Aligned_cols=231 Identities=14% Similarity=0.120 Sum_probs=186.1
Q ss_pred HHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcccCCCCCe
Q 021176 60 IRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGK 139 (316)
Q Consensus 60 ~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~ 139 (316)
++++|++|||++++|.++++||+++|+++|+++.. +...|+++..+++ +|+|+|+||+||||. .|+. ..+||+
T Consensus 2 ~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~-~~~~~~~~~~~~~-~~~i~~~~H~D~vp~----~~~~-~~~~g~ 74 (336)
T TIGR01902 2 LLKDLLEIYSPSGKEANAAKFLEEISKDLGLKLII-DDAGNFILGKGDG-HKKILLAGHVDTVPG----YIPV-KIEGGL 74 (336)
T ss_pred hHHHHhcCCCCCcchHHHHHHHHHHHHHcCCEEEE-CCCCcEEEEeCCC-CceEEEEccccccCC----Cccc-EEeCCE
Confidence 68899999999999999999999999999999854 3456888876433 589999999999995 2543 356899
Q ss_pred eeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCcceeEe
Q 021176 140 MHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVAS 215 (316)
Q Consensus 140 l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~ 215 (316)
+||||+ |++++++|+|++.|++. +.+|.|++++||| ++.|+++++++.. .+++++. ++ ++.-
T Consensus 75 i~GrG~~D~Kg~~aa~l~a~~~l~~~----~~~i~~~~~~dEE~g~~G~~~~~~~~~---~~~~ii~--ep---t~~~-- 140 (336)
T TIGR01902 75 LYGRGAVDAKGPLIAMIFATWLLNEK----GIKVIVSGLVDEESSSKGAREVIDKNY---PFYVIVG--EP---SGAE-- 140 (336)
T ss_pred EEEecccCCCcHHHHHHHHHHHHHhC----CCcEEEEEEeCcccCCccHHHHHhhcC---CCEEEEe--cC---CCCc--
Confidence 999997 89999999999999764 3589999999999 6789999998753 2355542 22 2210
Q ss_pred ecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEE
Q 021176 216 RPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIG 295 (316)
Q Consensus 216 ~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~ 295 (316)
....+++|..+++++++|+++|++.|. ||+..+.+++..|.+..... .....++++++.++||.+.|+||++|++.
T Consensus 141 ~i~~~~kG~~~~~v~~~G~~~Hss~~~---~ai~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~gg~~~nvIP~~a~~~ 216 (336)
T TIGR01902 141 GITLGYKGSLQLKIMCEGTPFHSSSAG---NAAELLIDYSKKIIEVYKQP-ENYDKPSIVPTIIRFGESYNDTPAKLELH 216 (336)
T ss_pred ceeeeeeeEEEEEEEEEecCcccCCCh---hHHHHHHHHHHHHHHHhccc-cCCCCCcceeEEEEccCCCcCCCceEEEE
Confidence 123356899999999999999999875 48999999999887322111 11234578999999999999999999999
Q ss_pred EEEeccChhcHHHHHHHHhh
Q 021176 296 GTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 296 ~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|+|++|+++++++.+++++
T Consensus 217 idiR~~p~~~~~~~~~~i~~ 236 (336)
T TIGR01902 217 FDLRYPPNNKPEEAIKEITD 236 (336)
T ss_pred EEEeeCCCCCHHHHHHHHHh
Confidence 99999999999999988864
No 47
>PRK13381 peptidase T; Provisional
Probab=100.00 E-value=3.4e-35 Score=277.94 Aligned_cols=243 Identities=19% Similarity=0.187 Sum_probs=192.2
Q ss_pred HHHHHHHhhcCCCCCc----------chHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC-CCC-cEEEEEeecCCCCC
Q 021176 57 MIGIRRKIHQNPELGY----------QEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT-GEP-PFVALRADMDSLPL 124 (316)
Q Consensus 57 ~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~-~~~-~~i~l~~H~Dvvp~ 124 (316)
+++.++++++|||+|. ++.++++||.++|+++|++....++.+||++++++ +++ |+|+|+||+||||+
T Consensus 3 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~nvi~~~~g~~~~~~~lll~~H~D~Vp~ 82 (404)
T PRK13381 3 LTDRFFRYLKVNSQSDAASGTLPSTPGQHELAKLLADELRELGLEDIVIDEHAIVTAKLPGNTPGAPRIGFIAHLDTVDV 82 (404)
T ss_pred HHHHhHhhEEEeccCCCCCCCCcCChhHHHHHHHHHHHHHHcCCCcEEEcCCeEEEEEEecCCCCCCeEEEEEEecCCCc
Confidence 6778999999999996 47889999999999999965445678899999964 344 89999999999998
Q ss_pred cccC--CC---ccc------------------------CCCCCeeeecCc-------hHHHHHHHHHHHHHHhccccCCc
Q 021176 125 QEMV--EW---EYK------------------------SKIPGKMHACGH-------DGHVTMLLGAAKILQEHREELKG 168 (316)
Q Consensus 125 ~~~~--~w---~~~------------------------~~~~g~l~grG~-------k~~~a~~l~a~~~l~~~~~~~~~ 168 (316)
++.. .| +|+ ...||++||||+ |+++|++|.|+++|++.+ .+++
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~-~~~g 161 (404)
T PRK13381 83 GLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENE-VEHG 161 (404)
T ss_pred cCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcC-CCCC
Confidence 6531 11 111 024678999995 899999999999998875 4688
Q ss_pred eEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CCCCCCC
Q 021176 169 TVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQHSID 246 (316)
Q Consensus 169 ~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~g~N 246 (316)
+|.|+|++||| |+.|++.++.+++ ..|++++++. +++. .+. .+++|..+++|+++|+++|++ .|+.|.|
T Consensus 162 ~i~~~~~~dEE~g~~G~~~~~~~~~--~~d~~~~~~~--~~~~-~i~----~~~~G~~~~~v~v~Gk~aHa~~~p~~g~N 232 (404)
T PRK13381 162 DIVVAFVPDEEIGLRGAKALDLARF--PVDFAYTIDC--CELG-EVV----YENFNAASAEITITGVTAHPMSAKGVLVN 232 (404)
T ss_pred CEEEEEEcccccccccHHHHHHhcC--CCCEEEEecC--CCcc-eEE----EecCcceEEEEEEEeEecCCCCCcccCcC
Confidence 99999999999 6689999987654 3677776543 3333 332 236799999999999999988 5889999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 247 PILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 247 ai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|+..+++++.+|+++..+........+++++.++|+ |++|++.+|+|+.|.++.+++.++|++
T Consensus 233 AI~~a~~~i~~l~~~~~~~~~~~~~~~i~v~~i~g~------p~~~~~~~diR~~~~~~~e~i~~~i~~ 295 (404)
T PRK13381 233 PILMANDFISHFPRQETPEHTEGREGYIWVNDLQGN------VNKAKLKLIIRDFDLDGFEARKQFIEE 295 (404)
T ss_pred HHHHHHHHHHhCCccCCCCCCCCcccEEEEEeEEeC------cceEEEEEEEecCCHHHHHHHHHHHHH
Confidence 999999999999876433222223346888888764 899999999999999999998887765
No 48
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-35 Score=263.67 Aligned_cols=255 Identities=17% Similarity=0.207 Sum_probs=204.4
Q ss_pred HHHHHHHHHhhcCCCCCcc--hH-HHHHHHHHHHHhcCCceEe---ccCCceEEEEEcC-CC-CcEEEEEeecCCCCCcc
Q 021176 55 GWMIGIRRKIHQNPELGYQ--EF-ETSQLIRSELDKMGIKYKH---PVAVTGVVGFIGT-GE-PPFVALRADMDSLPLQE 126 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~--e~-~~~~~l~~~l~~~G~~~~~---~~~~~~via~~~~-~~-~~~i~l~~H~Dvvp~~~ 126 (316)
...+..+++.++||++-.+ -. .+++|+..+.+.+|..++. .++.++++.+|.+ ++ -|.|+|++|+||||+..
T Consensus 25 ~~~v~~f~eylRi~Tv~p~~dy~~a~~~Fl~~~a~~l~l~~~~i~~~p~~~~~l~T~~GS~P~L~silL~SH~DVVP~f~ 104 (420)
T KOG2275|consen 25 NISVTRFREYLRIPTVQPNPDYTIACADFLKKYAKSLGLTVQKIESEPGKYVLLYTWLGSDPELPSILLNSHTDVVPVFR 104 (420)
T ss_pred chHHHHHHHHhhccccccCCCccHHHHHHHHHHHHhcCCceeEEEecCceeEEEEEeeCCCCCccceeeeccccccCCCc
Confidence 5677889999999998543 23 7899999999999998753 4557788888854 44 48999999999999965
Q ss_pred cCCCcccC-----CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C-cccHHHHHHccccccc
Q 021176 127 MVEWEYKS-----KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G-GGGAHKVLEAGVLEKV 196 (316)
Q Consensus 127 ~~~w~~~~-----~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g-~~G~~~~~~~~~~~~~ 196 (316)
+.|.+++ .+||.|||||+ |+-.++.|.|++.|+..+.+++++|.+.|++||| + ..|++.+.+...+++.
T Consensus 105 -e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~~~~~~~l 183 (420)
T KOG2275|consen 105 -EKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAKTEEFKKL 183 (420)
T ss_pred -ccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhhhhhhccc
Confidence 4897763 46799999998 8999999999999999999999999999999999 4 4899999884445555
Q ss_pred cEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhcc---------CC
Q 021176 197 NAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSRE---------AD 267 (316)
Q Consensus 197 d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~---------~~ 267 (316)
...++++.. +.....+ ...++++||..|+++++.|.++|+|.|. -..|+.++.+++..+.+...+. ..
T Consensus 184 ~~~filDEG-~~se~d~-~~vfyaEkg~w~~~v~~~G~~GHss~~~-~nTa~~~l~klv~~~~~fr~~q~~~l~~~p~~~ 260 (420)
T KOG2275|consen 184 NLGFILDEG-GATENDF-ATVFYAEKGPWWLKVTANGTPGHSSYPP-PNTAIEKLEKLVESLEEFREKQVDLLASGPKLA 260 (420)
T ss_pred ceeEEecCC-CCCcccc-eeEEEEeeceeEEEEEecCCCCCCCCCC-CccHHHHHHHHHHHHHHhHHHHHHHhhcCCcee
Confidence 555554332 2112222 4557889999999999999999999742 2357777888888777654211 12
Q ss_pred CCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHH
Q 021176 268 PLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRI 313 (316)
Q Consensus 268 ~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l 313 (316)
....+|+|++.|+||.+.|++|++.++.+|+|+.|..+.+++.+++
T Consensus 261 ~~~vtT~Nv~~i~GGv~~N~~P~~~ea~~dirv~~~~d~~~i~~~l 306 (420)
T KOG2275|consen 261 LGDVTTINVGIINGGVQSNVLPETFEAAFDIRVRPHVDVKAIRDQL 306 (420)
T ss_pred ccceeEEeeeeeecccccCcCchhheeeeeeEeccCCCHHHHHHHH
Confidence 2467899999999999999999999999999999999999999998
No 49
>PRK05469 peptidase T; Provisional
Probab=100.00 E-value=1.8e-34 Score=273.28 Aligned_cols=245 Identities=17% Similarity=0.198 Sum_probs=190.5
Q ss_pred HHHHHHHHHhhcCCCCCcc----------hHHHHHHHHHHHHhcCCc-eEeccCCceEEEEEcCC---CCcEEEEEeecC
Q 021176 55 GWMIGIRRKIHQNPELGYQ----------EFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTG---EPPFVALRADMD 120 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~---~~~~i~l~~H~D 120 (316)
+++++.+++|++|||+|.+ |.++++||+++|+++|++ ++. +..+||++.++++ ++|+|+|+||||
T Consensus 2 ~~~~~~l~~~~~i~s~s~~~~~~~~~~~~~~~~a~~l~~~l~~~G~~~~~~-~~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 2 DKLLERFLRYVKIDTQSDENSTTVPSTEGQWDLAKLLVEELKELGLQDVTL-DENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred chHHHHHHhhEEeecccCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEEE-CCCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 4688999999999999966 789999999999999997 554 4567899999553 249999999999
Q ss_pred CCCCccc---------------------CCCcccCC--------CCCeeeecC-----c--hHHHHHHHHHHHHHHhccc
Q 021176 121 SLPLQEM---------------------VEWEYKSK--------IPGKMHACG-----H--DGHVTMLLGAAKILQEHRE 164 (316)
Q Consensus 121 vvp~~~~---------------------~~w~~~~~--------~~g~l~grG-----~--k~~~a~~l~a~~~l~~~~~ 164 (316)
|||+.+. +.|++++. .++.+|||| + |+++|++|+|+++|++.+.
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 9987541 23444321 235688877 2 8999999999999998876
Q ss_pred cCCceEEEEEecCCCCcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CCCC
Q 021176 165 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQH 243 (316)
Q Consensus 165 ~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~~ 243 (316)
.++++|.|+|++|||.+.|++.++.+.. ..++.+.++. .+.+.+.. ..+|..+++++++|+++|++ .|+.
T Consensus 161 ~~~g~v~~~f~~dEE~g~Ga~~~~~~~~--~~~~~~~~~~---~~~g~~~~----~~~g~~~~~i~v~Gk~~Ha~~~p~~ 231 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIGRGADKFDVEKF--GADFAYTVDG---GPLGELEY----ENFNAASAKITIHGVNVHPGTAKGK 231 (408)
T ss_pred CCCCCEEEEEecccccCCCHHHhhhhhc--CCcEEEEecC---CCcceEEe----ccCceeEEEEEEeeecCCCCCCccc
Confidence 6789999999999994489988865432 3455554432 24555432 24688999999999999987 5899
Q ss_pred CCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 244 SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 244 g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|.||+..+++++..|+++..+........+++++.|+|| |++|++.+|+|+.|..+.+.+.++|++
T Consensus 232 g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~i~~g~i~gg------p~~~~i~~diR~~~~e~~e~i~~~i~~ 297 (408)
T PRK05469 232 MVNALLLAADFHAMLPADETPETTEGYEGFYHLTSIKGT------VEEAELSYIIRDFDREGFEARKALMQE 297 (408)
T ss_pred ccCHHHHHHHHHHhCCCCCCCCCCCCceEEEEEEEEEEc------cceEEEEEEEecCCHHHHHHHHHHHHH
Confidence 999999999999998876422211122245788888776 899999999999999999999988875
No 50
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=100.00 E-value=1.1e-33 Score=269.93 Aligned_cols=251 Identities=16% Similarity=0.140 Sum_probs=184.4
Q ss_pred HHHHHHHHHhhcCCCCCcc------------hHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCC
Q 021176 55 GWMIGIRRKIHQNPELGYQ------------EFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSL 122 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~------------e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvv 122 (316)
+++++++++|++|||++.+ +.++++|++++|+++|++++...+ ....+.++++ .|+|+|+||+|||
T Consensus 2 ~~~i~ll~~Lv~ipS~s~~~~p~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~-~~~~~~~~~~-~~~l~l~gH~D~V 79 (447)
T TIGR01887 2 DEILEDLKELIRIDSVEDLEEAKEGAPFGEGPKKALDKFLELAKRDGFTTENVDN-YAGYAEYGQG-EEYLGILGHLDVV 79 (447)
T ss_pred hHHHHHHHHhcCcCcCCCCCCCCCCCCcchhHHHHHHHHHHHHHHcCceEEEecC-ceEEEEeCCC-CCeEEEEeecCCC
Confidence 5689999999999999832 368999999999999999874321 1123334323 4799999999999
Q ss_pred CCcccCCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccc
Q 021176 123 PLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLE 194 (316)
Q Consensus 123 p~~~~~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~ 194 (316)
|+++ .|.++ ..+||++||||+ ||++++++.|+++|++.+.+++++|.|+|++||| |+.|++++++.....
T Consensus 80 p~~~--~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~~~ 157 (447)
T TIGR01887 80 PAGD--GWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEEAP 157 (447)
T ss_pred CCCC--CCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcCCC
Confidence 9975 58544 246799999997 8999999999999999888889999999999999 678999988763211
Q ss_pred ----ccc----EEEEec---------------------cCCCCCcceeE--eecccccc-------------------cc
Q 021176 195 ----KVN----AIFGLH---------------------VDPNLPIGEVA--SRPGPLLA-------------------GS 224 (316)
Q Consensus 195 ----~~d----~~~~~~---------------------~~~~~~~g~~~--~~~~~~~~-------------------G~ 224 (316)
..| ++++.. ...++|++.+. .....+++ |.
T Consensus 158 ~~~~~~d~~~~~~~~e~g~~~~~~~v~g~~~~~~~i~~~~~Ge~tn~~p~~a~~~v~~~~~~~~~~~~~~~~~~~~~~g~ 237 (447)
T TIGR01887 158 DIGFTPDAEFPIIYGEKGIVTLEISFKDDTEGDVVLESFKAGEAFNMVPDHATAVISGKELLEVEKEKFVFFIAKELEGS 237 (447)
T ss_pred CEEEeCCCCcceEEEecCeEEEEEEeccCCCCceeEEEEeCCCcCCccCcceEEEEeccchhHHHHHHHHHhhhcCcceE
Confidence 012 222210 00122333210 00001122 44
Q ss_pred e-----EEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHH--Hhhhc---------------------c-CCCCCCceEE
Q 021176 225 G-----FFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQ--HLVSR---------------------E-ADPLDSQVVT 275 (316)
Q Consensus 225 ~-----~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~--~~~~~---------------------~-~~~~~~~t~~ 275 (316)
. +++|+++|+++|+|.|+.|.||+..|++++..++ +...+ . ...+..+++|
T Consensus 238 ~~~~~~~~~i~v~G~~aHss~p~~G~NAi~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~n 317 (447)
T TIGR01887 238 FEVNDGTATITLEGKSAHGSAPEKGINAATYLALFLAQLNLAGGAKAFLQFLAEYLHEDHYGEKLGIDFHDDVSGDLTMN 317 (447)
T ss_pred EEecCCEEEEEEEeeecccCCCccCccHHHHHHHHHHhccCchhHHHHHHHHHHhcCCCCccccCCCcccCCCcCCcEEE
Confidence 4 7999999999999999999999999999999886 21000 0 0112457899
Q ss_pred EEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 276 VAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 276 i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
++.|++| +|++|++.+|+|++|+++.+++.+++.
T Consensus 318 vg~I~~g-----~p~~~~~~~d~R~~p~~~~e~~~~~i~ 351 (447)
T TIGR01887 318 VGVIDYE-----NAEAGLIGLNVRYPVGNDPDTMLKNEL 351 (447)
T ss_pred EEEEEEe-----CCcEEEEEEEEecCCCCCHHHHHHHHH
Confidence 9999988 389999999999999999998777654
No 51
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=5.8e-34 Score=270.23 Aligned_cols=241 Identities=20% Similarity=0.196 Sum_probs=188.7
Q ss_pred HHHHHHHHHhhcCCC---------CCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC-CCCcEEEEEeecCCCCC
Q 021176 55 GWMIGIRRKIHQNPE---------LGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT-GEPPFVALRADMDSLPL 124 (316)
Q Consensus 55 ~~~~~~~~~l~~ips---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~-~~~~~i~l~~H~Dvvp~ 124 (316)
+++++++++|++|+| .+++|.++++||+++|+++|+++++ +..+|+++++++ +++|+|+|+||+||||+
T Consensus 10 ~~~~~~~~~~~~~~s~~~g~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~-~~~~nl~a~~~g~~~~~~l~l~gH~DtVp~ 88 (412)
T PRK12892 10 QRVLDDLMELAAIGAAKTGVHRPTYSDAHVAARRRLAAWCEAAGLAVRI-DGIGNVFGRLPGPGPGPALLVGSHLDSQNL 88 (412)
T ss_pred HHHHHHHHHHHccCCCCCCeeeCCCCHHHHHHHHHHHHHHHHcCCEEEE-cCCCcEEEEecCCCCCCeEEEEccccCCCC
Confidence 568888888888866 5567899999999999999999886 356799999965 34588999999999997
Q ss_pred cccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-----c-ccHHHHHHccccc----
Q 021176 125 QEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-----G-GGAHKVLEAGVLE---- 194 (316)
Q Consensus 125 ~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-----~-~G~~~~~~~~~~~---- 194 (316)
+ |++||+ +|++++|.|++.|++.+..++++|.|++++|||+ + .|++.++.+....
T Consensus 89 ~------------g~~dg~---~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~~~~~~~~ 153 (412)
T PRK12892 89 G------------GRYDGA---LGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRLDPADALA 153 (412)
T ss_pred C------------Ccccch---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCCCHHHHHh
Confidence 5 456776 7999999999999999888999999999999995 3 5898887431100
Q ss_pred -------------------cccEEE-----------EeccCCC---CCcceeEeecccccccceEEEEEEEecCCCCC-C
Q 021176 195 -------------------KVNAIF-----------GLHVDPN---LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-I 240 (316)
Q Consensus 195 -------------------~~d~~~-----------~~~~~~~---~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~ 240 (316)
..|+++ -++.+.+ ++.+. ......+++|..+++++++|+++|++ .
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~d~~~~~ep~~~~~~~e~~~~~g~~~e~~~~-~~~i~~~~kG~~~~~i~v~G~~aHa~~~ 232 (412)
T PRK12892 154 ARCRSDGVPLRDALAAAGLAGRPRPAADRARPKGYLEAHIEQGPVLEQAGL-PVGVVTGIVGIWQYRITVTGEAGHAGTT 232 (412)
T ss_pred CccCCCCcCHHHHHHHcCCChhhcccccccCccEEEEEEeccCHhHhhCCC-cEEEEEEeccceEEEEEEEEECCCCCCC
Confidence 011111 1122211 11121 01223567899999999999999998 5
Q ss_pred CC-CCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 241 PQ-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 241 p~-~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
|+ .+.||+..+++++..|+++..+.. ..+++|++.|+|| .+.|+||++|++++|+|++|.++.+++.++|++
T Consensus 233 p~~~g~nAi~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~gg~~~~NvIP~~a~~~~diR~~p~~~~~~v~~~i~~ 306 (412)
T PRK12892 233 PMALRRDAGLAAAEMIAAIDEHFPRVC---GPAVVTVGRVALDPGSPSIIPGRVEFSFDARHPSPPVLQRLVALLEA 306 (412)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhcC---CCcEEEEEEEEecCCCCeEECCeEEEEEEeeCCCHHHHHHHHHHHHH
Confidence 75 689999999999999988643321 2379999999987 799999999999999999999999999998875
No 52
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.2e-33 Score=267.95 Aligned_cols=241 Identities=19% Similarity=0.260 Sum_probs=189.4
Q ss_pred HHHHHHHHHhhcCCCC----------CcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC-C-CCcEEEEEeecCCC
Q 021176 55 GWMIGIRRKIHQNPEL----------GYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT-G-EPPFVALRADMDSL 122 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~-~-~~~~i~l~~H~Dvv 122 (316)
+++++++++|++|||. |++|.++++||+++|+++|+++++. ...|+++++++ + ++|+|+|.||+|||
T Consensus 10 ~~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~a~~~g~~~~~~~l~l~~H~DtV 88 (412)
T PRK12893 10 ERLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVD-AIGNLFGRRAGTDPDAPPVLIGSHLDTQ 88 (412)
T ss_pred HHHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEeCCCCCCCCEEEEEecccCC
Confidence 6789999999999964 3458999999999999999998863 45699999954 3 25899999999999
Q ss_pred CCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHHHcccc---
Q 021176 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHKVLEAGVL--- 193 (316)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~~~~--- 193 (316)
|.+ |.+||+ ++++++|.|+++|++.+..++++|.|+|++|||+ +.|+.++......
T Consensus 89 p~~------------g~~dgk---~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~~G~~~~~~~~~~~~~ 153 (412)
T PRK12893 89 PTG------------GRFDGA---LGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAMLGSGVFTGALPLDDA 153 (412)
T ss_pred CCC------------Ccccch---hhHHHHHHHHHHHHHcCCCCCCCeEEEEEccccccccccccccHHHHhCcCChHHH
Confidence 974 445664 8999999999999998888899999999999994 3578777644220
Q ss_pred ----------------------------ccccEEEEeccCCCC---CcceeEeecccccccceEEEEEEEecCCCCCC-C
Q 021176 194 ----------------------------EKVNAIFGLHVDPNL---PIGEVASRPGPLLAGSGFFEAVIGGKGGHAAI-P 241 (316)
Q Consensus 194 ----------------------------~~~d~~~~~~~~~~~---~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~-p 241 (316)
.+.++.+.+|..++. +.+. ......+++|..+++++++|+++|++. |
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~G~~aHas~~p 232 (412)
T PRK12893 154 LARRDADGITLGEALARIGYRGTARVGRRAVDAYLELHIEQGPVLEAEGL-PIGVVTGIQGIRWLEVTVEGQAAHAGTTP 232 (412)
T ss_pred HhccCCCCCCHHHHHHHcCCCcccccccCCccEEEEEEeccCHHHHHCCC-cEEEEeeecccEEEEEEEEEECCCcCCCc
Confidence 012223333332210 0110 112235678999999999999999984 8
Q ss_pred C-CCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 242 Q-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 242 ~-~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+ .|.||+..+++++..|+++..+.. ..++++++.|++| .+.|+||++|++++|+|++|+++.+++.++|++
T Consensus 233 ~~~G~NAI~~a~~~i~~l~~~~~~~~---~~~~~~vg~i~ggg~~~NvVP~~a~~~~diR~~p~~~~~~i~~~i~~ 305 (412)
T PRK12893 233 MAMRRDALVAAARIILAVERIAAALA---PDGVATVGRLRVEPNSRNVIPGKVVFTVDIRHPDDARLDAMEAALRA 305 (412)
T ss_pred chhccCHHHHHHHHHHHHHHHHHhcC---CCceEEEEEEEeeCCCceEECCeeEEEEEeeCCCHHHHHHHHHHHHH
Confidence 4 799999999999999988754321 2468999999985 799999999999999999999999999998876
No 53
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=100.00 E-value=1.9e-33 Score=269.98 Aligned_cols=240 Identities=18% Similarity=0.207 Sum_probs=189.5
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC--C--CCcEEEEEeecCCCCCcccC--
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT--G--EPPFVALRADMDSLPLQEMV-- 128 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~--~--~~~~i~l~~H~Dvvp~~~~~-- 128 (316)
+++++++++|++|||+|++|.++++|+.++++++|++++++ ..+|+++.+++ + ..|+|+|.|||||||++...
T Consensus 10 ~~~~~~l~~Lv~ips~S~~e~~~~~~l~~~~~~~G~~~~~d-~~gnvi~~~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~ 88 (485)
T PRK15026 10 QPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKGFHVERD-QVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTV 88 (485)
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHhCCCEEEEE-ecCeEEEEEcCCCCCCCCCEEEEEeeecccCCCCCCcc
Confidence 57899999999999999999999999999999999998864 45788888742 2 24899999999999986532
Q ss_pred -CCcccC----CCCCeeeecCc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccc
Q 021176 129 -EWEYKS----KIPGKMHACGH------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKV 196 (316)
Q Consensus 129 -~w~~~~----~~~g~l~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~ 196 (316)
+|..++ ++||++||||+ |++++++|+++ ++.+. .+++|.++|++||| |+.|++.+.. .. ...
T Consensus 89 ~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~-~~~~i~~l~t~dEE~G~~ga~~l~~-~~-~~~ 162 (485)
T PRK15026 89 HDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENV-VHGPLEVLLTMTEEAGMDGAFGLQS-NW-LQA 162 (485)
T ss_pred ccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCC-CCCCEEEEEEcccccCcHhHHHhhh-cc-CCc
Confidence 574432 46889999996 58888877765 44444 37899999999999 7789999865 32 256
Q ss_pred cEEEEeccCCCCCcceeEeec--------------ccccccceEEEEEEEe-cCCCCC-CCCCCC-CHHHHHHHHHHHHH
Q 021176 197 NAIFGLHVDPNLPIGEVASRP--------------GPLLAGSGFFEAVIGG-KGGHAA-IPQHSI-DPILAASNVIVSLQ 259 (316)
Q Consensus 197 d~~~~~~~~~~~~~g~~~~~~--------------~~~~~G~~~~~i~v~G-~~~Hs~-~p~~g~-Nai~~~~~~i~~l~ 259 (316)
++++.+++. ..+.+.... ....+|..+++|+++| +++||+ .|+.|. ||+..|+++|..+.
T Consensus 163 ~~~i~~e~~---~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la~~l~~~~ 239 (485)
T PRK15026 163 DILINTDSE---EEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGGEIHVGLGNANKLLVRFLAGHA 239 (485)
T ss_pred CEEEEeCCC---CCCeEEEeCCCcceEEEEEEEEEEecCCCceEEEEEEECCCCcCChHHHCCCCccHHHHHHHHHHHhH
Confidence 788875443 223321111 0112577899999999 999999 799999 99999999999854
Q ss_pred HhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 260 HLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 260 ~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
. ..+++++.|+||.+.|+||++|++.+++|.......+++.+.+.
T Consensus 240 ~----------~~~~~v~~i~GG~~~NaIp~~a~a~i~~~~~~~~~~~~~~~~~~ 284 (485)
T PRK15026 240 E----------ELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDALKSLVNTYQ 284 (485)
T ss_pred h----------hCCeEEEEEeCCCccCCCCCCcEEEEEEChhHHHHHHHHHHHHH
Confidence 2 16889999999999999999999999999887777777766554
No 54
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=2.9e-33 Score=265.41 Aligned_cols=241 Identities=19% Similarity=0.253 Sum_probs=186.5
Q ss_pred HHHHHHHHHhhcC-C---------CCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCC--CCcEEEEEeecCCC
Q 021176 55 GWMIGIRRKIHQN-P---------ELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSL 122 (316)
Q Consensus 55 ~~~~~~~~~l~~i-p---------s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~i~l~~H~Dvv 122 (316)
+.+++.+++|++| + |.|++|.++++||+++|+++||++++. ...|+++++++. ++|+|+|+||+|||
T Consensus 7 ~~~~~~~~~l~~~~~~~~~g~~~~s~s~~e~~~a~~l~~~l~~~g~~~~~~-~~~nl~a~~~g~~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 7 ERLWARLDELAKIGATPDGGVTRLALSPEDLQARDLFAEWMEAAGLTVRVD-AVGNLFGRLEGRDPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHhcccCCCCCceeeccCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCEEEEecCccCC
Confidence 5677778888887 3 678889999999999999999998863 567999999653 35899999999999
Q ss_pred CCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHHHHccc----
Q 021176 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVLEAGV---- 192 (316)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~~~~~~---- 192 (316)
|++ |.++| |+++|++++|+++|++.+..++++|.|++++|||++ .|++.+++...
T Consensus 86 p~~------------g~~d~---k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~~~~~~ 150 (413)
T PRK09290 86 PNG------------GRFDG---PLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGALTPEDA 150 (413)
T ss_pred CCC------------CCcCC---HHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHcccCHHHH
Confidence 974 22333 689999999999999988888999999999999942 57777653210
Q ss_pred ------------------cccccEEEEe-------------ccCCC---CCcceeEeecccccccceEEEEEEEecCCCC
Q 021176 193 ------------------LEKVNAIFGL-------------HVDPN---LPIGEVASRPGPLLAGSGFFEAVIGGKGGHA 238 (316)
Q Consensus 193 ------------------~~~~d~~~~~-------------~~~~~---~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs 238 (316)
-.+.|++++. |++.+ +|++.. .....+++|..+++++++|+++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~ept~~~~~~~~~~~~~~~~e~~~~~-~~i~~~~kG~~~~~i~v~Gk~aHa 229 (413)
T PRK09290 151 LALRDADGVSFAEALAAIGYDGDEAVGAARARRDIKAFVELHIEQGPVLEAEGLP-IGVVTGIVGQRRYRVTFTGEANHA 229 (413)
T ss_pred HhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeccCHHHHHCCCc-EEEEeeeeccEEEEEEEEEECCCC
Confidence 0123443321 11000 122211 122356789999999999999999
Q ss_pred C-CC-CCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 239 A-IP-QHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 239 ~-~p-~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+ .| +.|.||+..+++++..|+++..+.. ...+++++.+++| .+.|+||++|++++|+|++|+++.+++.++|++
T Consensus 230 s~~P~~~g~NAI~~~~~~i~~l~~l~~~~~---~~~~~~~g~i~~g~~~~NvIP~~a~~~~diR~~p~e~~e~v~~~i~~ 306 (413)
T PRK09290 230 GTTPMALRRDALLAAAEIILAVERIAAAHG---PDLVATVGRLEVKPNSVNVIPGEVTFTLDIRHPDDAVLDALVAELRA 306 (413)
T ss_pred CCCCchhccCHHHHHHHHHHHHHHHHHhcC---CCeEEEEEEEEEcCCCCeEECCEEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 8 68 5799999999999999988653221 2368999999975 799999999999999999999999999998875
No 55
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=100.00 E-value=1.5e-33 Score=267.01 Aligned_cols=246 Identities=16% Similarity=0.175 Sum_probs=187.7
Q ss_pred HHHHHHHHHhhcCCCCCc----------chHHHHHHHHHHHHhcCCc-eEeccCCceEEEEEcCCCC---cEEEEEeecC
Q 021176 55 GWMIGIRRKIHQNPELGY----------QEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTGEP---PFVALRADMD 120 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~~~---~~i~l~~H~D 120 (316)
+.+++.+-++++|+|.|+ .|.++++||+++|+++|++ ++.+++.+||+|.+++..+ |+|+|.+|||
T Consensus 3 ~~~~~~f~~~~~i~s~s~~~~~~~ps~~~~~~~a~~l~~~l~~lG~~~v~~d~~~gnv~~~~~~~~~~~~~~i~~~aHmD 82 (410)
T TIGR01882 3 EELLPRFLTYVKVNTRSDENSDTCPSTPGQLTFGNMLVDDLKSLGLQDAHYDEKNGYVIATIPSNTDKDVPTIGFLAHVD 82 (410)
T ss_pred hHHHHHHHhhEEEecccCCCCCCCCCCHhHHHHHHHHHHHHHHcCCceEEEcCCceEEEEEecCCCCCCCCEEEEEEecc
Confidence 568888999999999997 5668999999999999997 7765437899999865433 9999999999
Q ss_pred CCCCcccC-------------------------CCccc----------C-CCCCeeeecCchHHHHHHHHHHHHHHhccc
Q 021176 121 SLPLQEMV-------------------------EWEYK----------S-KIPGKMHACGHDGHVTMLLGAAKILQEHRE 164 (316)
Q Consensus 121 vvp~~~~~-------------------------~w~~~----------~-~~~g~l~grG~k~~~a~~l~a~~~l~~~~~ 164 (316)
|||..... .|.|+ . ..++.+||.++|+++|++|.|++.|++.+.
T Consensus 83 Tv~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~ 162 (410)
T TIGR01882 83 TADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPE 162 (410)
T ss_pred cCcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCC
Confidence 99853221 34332 1 345699999999999999999999998643
Q ss_pred cCCceEEEEEecCCCCcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCCCC-CC
Q 021176 165 ELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIP-QH 243 (316)
Q Consensus 165 ~~~~~i~~~~~~~EEg~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p-~~ 243 (316)
.++++|.|+|+++||.+.|++.+..++. +.++.+.+ + ++|++.+..+ ..|..+++|+++|+++|++.+ +.
T Consensus 163 ~~~g~I~~~ft~dEE~g~Ga~~l~~~~~--~~~~~~~i--~-gep~g~i~~~----~~g~~~~~I~v~Gk~aHa~~~~~~ 233 (410)
T TIGR01882 163 IKHGTIRVAFTPDEEIGRGAHKFDVKDF--NADFAYTV--D-GGPLGELEYE----TFSAAAAKITIQGNNVHPGTAKGK 233 (410)
T ss_pred CCCCCEEEEEECcccCCcCcchhhhhhc--CccEEEEe--C-CCCCCeEEEc----cccceEEEEEEEEEecCcccChHH
Confidence 4688999999999995578888765433 34555543 3 3567765433 257899999999999999964 67
Q ss_pred CCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 244 SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 244 g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+.||+..+.+++..++.... ...++-+++.+++| ..|.||++|++.+|+|+.+.++.+++.+++++
T Consensus 234 g~nAi~~a~~~~~~l~~~~~-----~~~t~~~~g~i~~g-~i~giPd~a~l~~diR~~~~e~~e~i~~~i~~ 299 (410)
T TIGR01882 234 MINAAQIAIDLHNLLPEDDR-----PEYTEGREGFFHLL-SIDGTVEEAKLHYIIRDFEKENFQERKELMKR 299 (410)
T ss_pred HHHHHHHHHHHHHhcCCcCC-----CccccceeEEEEEE-eEEEecCEEEEEEEEecCCHHHHHHHHHHHHH
Confidence 99999999998776654311 11111123344555 35669999999999999999999999988875
No 56
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=100.00 E-value=6.1e-32 Score=260.64 Aligned_cols=243 Identities=18% Similarity=0.182 Sum_probs=187.0
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCC----CCcEEEEEeecCCCCCccc---
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG----EPPFVALRADMDSLPLQEM--- 127 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~----~~~~i~l~~H~Dvvp~~~~--- 127 (316)
+++++++++|++|||+|++|.++++|++++|+++|++++++ ...|+++.+++. +.|+|+|.||+||||.+..
T Consensus 4 ~~~~~~l~~l~~i~s~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~n~~~~~~~~~g~~~~~~l~l~~HlDtV~~~~~~~~ 82 (477)
T TIGR01893 4 SRVFKYFEEISKIPRPSKNEKEVSNFIVNWAKKLGLEVKQD-EVGNVLIRKPATPGYENHPPIVLQGHMDMVCEKNEDSL 82 (477)
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHcCCeEEEe-CCCeEEEEEcCCCCCCCCCeEEEEeeccccCCCCCCCC
Confidence 67889999999999999999999999999999999998864 457999998532 2488999999999998653
Q ss_pred CCCccc----CCCCCeeeecCc------hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccc
Q 021176 128 VEWEYK----SKIPGKMHACGH------DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKV 196 (316)
Q Consensus 128 ~~w~~~----~~~~g~l~grG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~ 196 (316)
..|..+ ..+||++||||+ |++++++|++++. .+ .++++|.++|++||| |+.|++.+..+.. ..
T Consensus 83 ~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~-~~~~~i~~~~~~dEE~g~~Gs~~l~~~~~--~~ 156 (477)
T TIGR01893 83 HDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NN-LKHPPLELLFTVDEETGMDGALGLDENWL--SG 156 (477)
T ss_pred CCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CC-CCCCCEEEEEEeccccCchhhhhcChhhc--CC
Confidence 357543 256899999995 6889988887764 33 356799999999999 6689999876543 22
Q ss_pred cEEEEeccCC------CCCcce-e--E--eecccccccceEEEEEEEe-cCCCCC-CCCCC-CCHHHHHHHHHHHHHHhh
Q 021176 197 NAIFGLHVDP------NLPIGE-V--A--SRPGPLLAGSGFFEAVIGG-KGGHAA-IPQHS-IDPILAASNVIVSLQHLV 262 (316)
Q Consensus 197 d~~~~~~~~~------~~~~g~-~--~--~~~~~~~~G~~~~~i~v~G-~~~Hs~-~p~~g-~Nai~~~~~~i~~l~~~~ 262 (316)
++.+..+... +.+.+. . . ......++|..+++++++| +++||| .|+.+ .||+..++++|..+++..
T Consensus 157 ~~~~~~d~~~~~~~~~g~~~~~~~~~~~e~~~e~~~kG~~~~~i~~~G~~~~Hsg~~p~~~r~nAi~~aa~~i~~l~~~~ 236 (477)
T TIGR01893 157 KILINIDSEEEGEFIVGCAGGRNVDITFPVKYEKFTKNEEGYQISLKGLKGGHSGADIHKGRANANKLMARVLNELKENL 236 (477)
T ss_pred cEEEEecCCCCCeEEEECCCCeeEEEEEEEEEEecCCCceEEEEEEeCcCCCcCccccCCCCcCHHHHHHHHHHhhhhcC
Confidence 4444322110 011110 0 0 0001114789999999999 999998 68888 599999999999988752
Q ss_pred hccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 263 SREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 263 ~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
..+++.+.||.+.|+||++|++.+|+|.......+++.+++.
T Consensus 237 ----------~~~v~~~~gg~~~N~ip~~~~~~~diR~~~~~~l~~~~~~~~ 278 (477)
T TIGR01893 237 ----------NFRLSDIKGGSKRNAIPREAKALIAIDENDVKLLENLVKNFQ 278 (477)
T ss_pred ----------CeEEEEEeCCCcccccCCceEEEEEEChhHHHHHHHHHHHHH
Confidence 267888999999999999999999999888887777776654
No 57
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=7.4e-32 Score=255.80 Aligned_cols=226 Identities=20% Similarity=0.226 Sum_probs=178.4
Q ss_pred CCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCC-C-CcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCchH
Q 021176 70 LGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDG 147 (316)
Q Consensus 70 ~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~-~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k~ 147 (316)
.+.+|.++++||+++|+++|++++++ ...|+++++++. + +|+|+|+||+||||.+ |. .++|+
T Consensus 35 ~~~~e~~~~~~l~~~l~~~G~~v~~~-~~gNl~a~~~g~~~~~~~l~~~~H~DtVp~g------------g~---~D~k~ 98 (414)
T PRK12891 35 LTDGDREARDLFVAWARDAGCTVRVD-AMGNLFARRAGRDPDAAPVMTGSHADSQPTG------------GR---YDGIY 98 (414)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEC-CCCCEEEEecCCCCCCCeEEEEecccCCCCC------------cc---ccchh
Confidence 35578999999999999999999874 567999999553 2 4899999999999975 22 24589
Q ss_pred HHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHH------------------------HHccccc---
Q 021176 148 HVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKV------------------------LEAGVLE--- 194 (316)
Q Consensus 148 ~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~------------------------~~~~~~~--- 194 (316)
|++++|+|+++|++.+.+++++|.|++++|||++ .|+..+ .+.++..
T Consensus 99 Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 178 (414)
T PRK12891 99 GVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVFFGVYPLEYLLSRRDDTGRTLGEHLARIGYAGAEP 178 (414)
T ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHHhCCCCHHHHHhccCCCCCCHHHHHHHCCCCcccc
Confidence 9999999999999999999999999999999953 366533 3333211
Q ss_pred ----cccEEEEeccCCC---CCcceeEeecccccccceEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHHHHHHHhhhcc
Q 021176 195 ----KVNAIFGLHVDPN---LPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQ-HSIDPILAASNVIVSLQHLVSRE 265 (316)
Q Consensus 195 ----~~d~~~~~~~~~~---~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~-~g~Nai~~~~~~i~~l~~~~~~~ 265 (316)
..++.+.+|.+++ ++.+. ......+++|..+++|+++|+++|+| .|+ .|.||+..+++++..|+++..+.
T Consensus 179 ~~~~~~~~~~e~h~e~g~vle~~~~-~~~iv~~~kG~~~~~v~v~Gk~aHa~~~P~~~g~nAI~~aa~~i~~l~~~~~~~ 257 (414)
T PRK12891 179 VGGYPVHAAYELHIEQGAILERAGK-TIGVVTAGQGQRWYEVTLTGVDAHAGTTPMAFRRDALVGAARMIAFLDALGRRD 257 (414)
T ss_pred cccCCCCEEEEEEeCCCHHHHHCCC-cEEEEeeccCcEEEEEEEEeECCCCCCCCcccccCHHHHHHHHHHHHHHHHHhc
Confidence 2234555565543 11221 11223457899999999999999998 686 58999999999999998875321
Q ss_pred CCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 266 ADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 266 ~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
....++|++.|+|| .+.|+||++|++.+|+|++|.++.+++.++|++
T Consensus 258 ---~~~~t~~vg~I~gG~~~~NvVP~~~~~~~diR~~~~e~~e~v~~~i~~ 305 (414)
T PRK12891 258 ---APDARATVGMIDARPNSRNTVPGECFFTVEFRHPDDAVLDRLDAALRA 305 (414)
T ss_pred ---CCCeEEEEEEEEeeCCCcceECCeEEEEEEeeCCCHHHHHHHHHHHHH
Confidence 12469999999997 699999999999999999999999999998875
No 58
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=100.00 E-value=1.6e-31 Score=253.65 Aligned_cols=232 Identities=17% Similarity=0.201 Sum_probs=176.9
Q ss_pred hhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCC--CCcEEEEEeecCCCCCcccCCCcccCCCCCeee
Q 021176 64 IHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMH 141 (316)
Q Consensus 64 l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~ 141 (316)
.++.||++++|.++++||+++|+++|+++++. ...|+++++++. ++|+|+|+||+||||++ |..
T Consensus 27 ~~~~~s~~~~e~~~~~~l~~~l~~~G~~~~~~-~~~nlia~~~g~~~~~~~l~~~~H~DtVp~~------------g~~- 92 (414)
T PRK12890 27 GWTRLALSDEERAARALLAAWMRAAGLEVRRD-AAGNLFGRLPGRDPDLPPLMTGSHLDTVPNG------------GRY- 92 (414)
T ss_pred ceeeccCCHHHHHHHHHHHHHHHHCCCEEEEc-CCCcEEEEeCCCCCCCCEEEEeCcccCCCCC------------CCc-
Confidence 34455788999999999999999999999864 467999999653 35899999999999974 332
Q ss_pred ecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC-c-----ccHHHHHHcccc----------------------
Q 021176 142 ACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG-G-----GGAHKVLEAGVL---------------------- 193 (316)
Q Consensus 142 grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg-~-----~G~~~~~~~~~~---------------------- 193 (316)
+.|++++++|++++.|++.+..++++|.|++++|||+ + .|++.+......
T Consensus 93 --D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 170 (414)
T PRK12890 93 --DGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGTLDVEAVLATRDDDGTTLAEALRRIG 170 (414)
T ss_pred --CCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcccChHHHHhccCCCCCCHHHHHHHcC
Confidence 3368999999999999998888899999999999994 2 466555432110
Q ss_pred ccccE-------------EEEeccCCCC---CcceeEeecccccccceEEEEEEEecCCCCC-CCC-CCCCHHHHHHHHH
Q 021176 194 EKVNA-------------IFGLHVDPNL---PIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IPQ-HSIDPILAASNVI 255 (316)
Q Consensus 194 ~~~d~-------------~~~~~~~~~~---~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p~-~g~Nai~~~~~~i 255 (316)
...|. .+.+|.+.+. +.+. ......+++|..+++|+++|+++|++ .|+ .+.||+..+++++
T Consensus 171 ~~~~~~~~~~~ep~~~~~~~~~h~~~g~~~~~~~~-~~~i~~~~kG~~~~~i~v~Gk~aHas~~P~~~g~nAI~~~~~~i 249 (414)
T PRK12890 171 GDPDALPGALRPPGAVAAFLELHIEQGPVLEAEGL-PIGVVTAIQGIRRQAVTVEGEANHAGTTPMDLRRDALVAAAELV 249 (414)
T ss_pred CChhhccccccCCCCccEEEEEeeCcCHHHHhCCC-ceEEEEeecCcEEEEEEEEEECCCCCcCChhhccCHHHHHHHHH
Confidence 01121 1112221110 0111 01223467899999999999999998 585 4589999999999
Q ss_pred HHHHHhhhccCCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 256 VSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 256 ~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
..|+++..+.. ...+++++.|++| .+.|+||++|++++|+|++|+++.+++.++|++
T Consensus 250 ~~l~~~~~~~~---~~~~~~~g~i~~gg~~~NvIP~~a~~~~diR~~p~~~~~~i~~~i~~ 307 (414)
T PRK12890 250 TAMERRARALL---HDLVATVGRLDVEPNAINVVPGRVVFTLDLRSPDDAVLEAAEAALLA 307 (414)
T ss_pred HHHHHHHHhcC---CCeEEEEEEEEECCCCceEECCeEEEEEEeeCCCHHHHHHHHHHHHH
Confidence 99998754322 3568999999975 799999999999999999999999999888865
No 59
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=99.98 E-value=1.9e-30 Score=245.30 Aligned_cols=227 Identities=21% Similarity=0.283 Sum_probs=178.1
Q ss_pred CCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCC-C-CcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCch
Q 021176 69 ELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG-E-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 146 (316)
Q Consensus 69 s~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~-~-~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k 146 (316)
|.+++|.++++||+++|+++|++++++ ...|+++++++. + +|+|+|+||+||||.+ |++||+
T Consensus 25 ~~~~~e~~~~~~l~~~~~~~G~~~~~~-~~~nl~a~~~g~~~~~~~l~~~~H~DtV~~g------------g~~dg~--- 88 (401)
T TIGR01879 25 ALSPEDREAQDLFKKRMRAAGLEVRFD-EVGNLIGRKEGTEPPLEVVLSGSHIDTVVNG------------GNFDGQ--- 88 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCEEEEe-cCCcEEEEecCCCCCCCEEEEecccccCCCC------------CccCCH---
Confidence 346689999999999999999998864 457999999654 3 4899999999999974 566776
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHHHHHcccc---------------------------
Q 021176 147 GHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHKVLEAGVL--------------------------- 193 (316)
Q Consensus 147 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~~~~~~~~--------------------------- 193 (316)
.|++++|.+++.|++.+.+++++|.|++++|||+ ..|++.++.....
T Consensus 89 ~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~ 168 (401)
T TIGR01879 89 LGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLANPEDVRNICDAKGISFAEAMKACGPDLPN 168 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhcccchhHHHhCcCCCCCCHHHHHHHcCCCccc
Confidence 6899999999999999999999999999999995 2678777542100
Q ss_pred ------ccccEEEEeccCCCCC---cceeEeecccccccceEEEEEEEecCCCCCC-CC-CCCCHHHHHHHHHHHHHHhh
Q 021176 194 ------EKVNAIFGLHVDPNLP---IGEVASRPGPLLAGSGFFEAVIGGKGGHAAI-PQ-HSIDPILAASNVIVSLQHLV 262 (316)
Q Consensus 194 ------~~~d~~~~~~~~~~~~---~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~-p~-~g~Nai~~~~~~i~~l~~~~ 262 (316)
.++++.+.+|.+.+.- .|. ......+++|..|++|+++|+++|++. |+ .+.||+..+++++..|+++.
T Consensus 169 ~~~~~~~~~~~~~e~Hieqg~~l~~~g~-~~~v~~~~~G~~~~~i~v~G~~aHa~~~p~~~g~nAi~~aa~~i~~l~~l~ 247 (401)
T TIGR01879 169 QPLRPRGDIKAYVELHIEQGPVLESNGQ-PIGVVNAIAGQRWYKVTLNGESNHAGTTPMSLRRDPLVAASRIIHQVEEKA 247 (401)
T ss_pred ccccccccccEEEEEEEcCCcChhhCCC-eEEEEEEecCcEEEEEEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHH
Confidence 0112334444443311 111 112335678999999999999999984 64 57999999999999999875
Q ss_pred hccCCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 263 SREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 263 ~~~~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.+.. ...+.+++.|++| .+.|+||++|++.+|+|+.|+++.+++.+++++
T Consensus 248 ~~~~---~~~~~~vg~i~~g~~~~NvVP~~a~~~~diR~~p~~~~e~v~~~i~~ 298 (401)
T TIGR01879 248 KRMG---DPTVGTVGKVEARPNGVNVIPGKVTFTLDLRHTDAAVLRDFTQQLEN 298 (401)
T ss_pred HhcC---CCeEEEEEEEEecCCceEEECCEEEEEEEeeCCCHHHHHHHHHHHHH
Confidence 3321 2357899999985 679999999999999999999999999998875
No 60
>PRK08554 peptidase; Reviewed
Probab=99.97 E-value=1.8e-29 Score=240.55 Aligned_cols=253 Identities=23% Similarity=0.276 Sum_probs=170.8
Q ss_pred HHHHHHHHhhcCCCCCcc------hHHHHHHHHHHHHhcCCceEec--cCCceEEEEEcCCCCcEEEEEeecCCCCCccc
Q 021176 56 WMIGIRRKIHQNPELGYQ------EFETSQLIRSELDKMGIKYKHP--VAVTGVVGFIGTGEPPFVALRADMDSLPLQEM 127 (316)
Q Consensus 56 ~~~~~~~~l~~ips~s~~------e~~~~~~l~~~l~~~G~~~~~~--~~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~ 127 (316)
++++++++|++|||++.. +.++++|++++|+++|++++.. .+.+|+++.++++ +|+|+|+||+||||+++
T Consensus 2 ~~~~~l~~LV~i~S~~~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~l~~~~~~~-~~~l~l~gH~DtVp~~~- 79 (438)
T PRK08554 2 DVLELLSSLVSFETVNDPSKGIKPSKECPKFIKDTLESWGIESELIEKDGYYAVYGEIGEG-KPKLLFMAHFDVVPVNP- 79 (438)
T ss_pred hHHHHHHHHhCCCCCCCcccCcchHHHHHHHHHHHHHHCCCeEEEEecCCceEEEEEeCCC-CCEEEEEeccccCCCCc-
Confidence 478899999999998743 5789999999999999998643 2457899998543 37899999999999975
Q ss_pred CCCc---ccC-CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccc--ccccc
Q 021176 128 VEWE---YKS-KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV--LEKVN 197 (316)
Q Consensus 128 ~~w~---~~~-~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~--~~~~d 197 (316)
..|. |.. ++||++||||+ |++++++|+|+++|++.+ ++++|+|+|++||| ++.++..+++... ....|
T Consensus 80 ~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~--~~~~i~l~~~~dEE~g~~~~~~~~~~~~~~~~~~~ 157 (438)
T PRK08554 80 EEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP--LNGKVIFAFTGDEEIGGAMAMHIAEKLREEGKLPK 157 (438)
T ss_pred cccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEcccccCccccHHHHHHHHhcCCCCC
Confidence 3575 432 56899999996 899999999999998743 67899999999999 5555556655321 12467
Q ss_pred EEEEeccCCCCCcceeEeeccc-----------ccccc---eEEEEEEEecC-CCCCCCCCCCC--HHHHHHHHHHHHHH
Q 021176 198 AIFGLHVDPNLPIGEVASRPGP-----------LLAGS---GFFEAVIGGKG-GHAAIPQHSID--PILAASNVIVSLQH 260 (316)
Q Consensus 198 ~~~~~~~~~~~~~g~~~~~~~~-----------~~~G~---~~~~i~v~G~~-~Hs~~p~~g~N--ai~~~~~~i~~l~~ 260 (316)
++++.++....+ .+..+.|. ...|. .++.+++.|.+ +|++.+..+.| |+..+++++..+..
T Consensus 158 ~~iv~Ept~~~~--~~~~~kg~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~Ha~~~~~g~~~~~i~~~~~~~~~~~~ 235 (438)
T PRK08554 158 YMINADGIGMKP--IIRRRKGFGVTIRVPSEKVKVKGKLREQTFEIRTPVVETRHAAYFLPGVDTHPLIAASHFLRESNV 235 (438)
T ss_pred EEEEeCCCCCcc--hhhcCCceEEEEEecccccccccceeeeeeceeecccCccccccccCCcCchHHHHHHHHHhhcCc
Confidence 777643321111 11111000 00122 24445555654 99997766665 57778777776653
Q ss_pred hh----hc-cCCCCCCceEEEEEEE--cCC-----------------------------------cCcee---CCeEEEE
Q 021176 261 LV----SR-EADPLDSQVVTVAKFQ--GGG-----------------------------------AFNVI---PDSVLIG 295 (316)
Q Consensus 261 ~~----~~-~~~~~~~~t~~i~~i~--gg~-----------------------------------~~nvi---P~~a~~~ 295 (316)
.. .. ......+.+++++... +|. ..|++ |++|++.
T Consensus 236 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~g~n~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~n~~~i~~g~a~~~ 315 (438)
T PRK08554 236 LAVSLEGKFLKGNVVPGEVTLTYLEPGEGEEVEVDLGLTRLLKAIVPLVRAPIKAEKYSDYGVSITPNVYSFAEGKHVLK 315 (438)
T ss_pred eEEEEeeeeeecCcccceeEEEEecCCCCccccccccHHHHHHHHHHHHHHhhccccccccceeeccceEEecCCeEEEE
Confidence 21 10 0001111223333322 333 55666 9999999
Q ss_pred EEEeccChhcHHHHHHHHhh
Q 021176 296 GTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 296 ~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|+|+.| .+.+++.++|++
T Consensus 316 ~DiR~~~-~~~e~v~~~i~~ 334 (438)
T PRK08554 316 LDIRAMS-YSKEDIERTLKE 334 (438)
T ss_pred EEEEecC-CCHHHHHHHHHH
Confidence 9999988 688999999876
No 61
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=99.97 E-value=5.4e-29 Score=235.30 Aligned_cols=241 Identities=15% Similarity=0.184 Sum_probs=185.7
Q ss_pred HHHHHHHHHhhcC-CC---------CCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCC--CCcEEEEEeecCCC
Q 021176 55 GWMIGIRRKIHQN-PE---------LGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTG--EPPFVALRADMDSL 122 (316)
Q Consensus 55 ~~~~~~~~~l~~i-ps---------~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~--~~~~i~l~~H~Dvv 122 (316)
+++.+.+.+|-+| .. .|..+.++.+|++++++++|++++.+ .-+|+++++++. +.|+|++.+|+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~g~~R~~~s~~~~~a~~~~~~~~~~~Gl~v~~D-~~gN~~~~~~g~~~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 3 KHFRQAIEELSSFGADPAGGMTRLLYSPEWLAAQQQFKKRMAESGLETRFD-DVGNLYGRLVGTEFPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHhccCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCEEEEc-CCCcEEEEecCCCCCCCeEEEeccccCC
Confidence 3455555555555 11 23457899999999999999998764 568999999654 24899999999999
Q ss_pred CCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHHHH-------
Q 021176 123 PLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVLE------- 189 (316)
Q Consensus 123 p~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~~~------- 189 (316)
|.+ |+..|. .|+++.|++++.|++.+..++++|.+++.++|||+ .|++.+.-
T Consensus 82 ~~g------------G~~dg~---~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~g~~~~~~~ 146 (406)
T TIGR03176 82 VNG------------GNLDGQ---FGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIFGLAKPEDV 146 (406)
T ss_pred CCC------------CccCch---hhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHhCCCCHHHH
Confidence 976 555566 89999999999999999999999999999999963 46666551
Q ss_pred -----------------ccc--------cccccEEEEeccCCCCC---cceeEeecccccccceEEEEEEEecCCCCCCC
Q 021176 190 -----------------AGV--------LEKVNAIFGLHVDPNLP---IGEVASRPGPLLAGSGFFEAVIGGKGGHAAIP 241 (316)
Q Consensus 190 -----------------~~~--------~~~~d~~~~~~~~~~~~---~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p 241 (316)
.|+ ..++++.+.+|.+.+.- .+. ......+++|..+++|+++|+++|+|.|
T Consensus 147 ~~~~d~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~elHieqG~~Le~~g~-~igiv~~~~G~~~~~v~v~GkaaHag~~ 225 (406)
T TIGR03176 147 RTIEDAKGIKFVDAMHACGFDLRKAPTVRDDIKAFVELHIEQGCVLESEGQ-SIGVVNAIVGQRRYTVNLKGEANHAGTT 225 (406)
T ss_pred HhCcCCCCCCHHHHHHHcCCCcccccccccccceEEEEEECCCcchHHCCC-eEEEEeecccceEEEEEEEEECCCCCCC
Confidence 000 01355777788866522 121 1122345679999999999999999964
Q ss_pred CC--CCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEE-cCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 242 QH--SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQ-GGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 242 ~~--g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~-gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
.. +.||+..+++++..+.++..+. ....++|++.|+ +|.+.|+||++|++.+|+|.+|..+.+.+.+++++
T Consensus 226 p~~~r~dAi~aaa~~i~~l~~~~~~~---~~~~~~tvG~I~~gg~~~NvIP~~a~~~~DiR~~~~~~~e~v~~~i~~ 299 (406)
T TIGR03176 226 PMSYRRDTVYAFSRICTQSIERAKEI---GDPLVLTFGKVEPVPNTVNVVPGETTFTIDCRHTDAAVLRNFTKELEN 299 (406)
T ss_pred CcccccCHHHHHHHHHHHHHHHHHhc---CCCcEEEEEEEEEcCCceEEECCeEEEEEEeeCCCHHHHHHHHHHHHH
Confidence 43 4899999999999998864322 233689999999 47899999999999999999999999887777764
No 62
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=99.97 E-value=5.3e-28 Score=237.69 Aligned_cols=242 Identities=19% Similarity=0.216 Sum_probs=188.5
Q ss_pred HHHHHHHHHhhcCCCC-------------CcchHHHHHHHHHHHHhcCCc-eEeccCCceEEEEEcCC--CCcEEEEEee
Q 021176 55 GWMIGIRRKIHQNPEL-------------GYQEFETSQLIRSELDKMGIK-YKHPVAVTGVVGFIGTG--EPPFVALRAD 118 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~-------------s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~~via~~~~~--~~~~i~l~~H 118 (316)
+++.+.+.+|-+|+.+ |..+.++++|+.++|+++|++ ++++ .-+|+++++++. +.|+|++.+|
T Consensus 181 ~r~~~~l~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~~~~~~~~~Gl~~v~~D-~~gNv~~~~~g~~~~~p~v~~gSH 259 (591)
T PRK13799 181 ADVMDWAEDIAAHSDPGYADEGALTCTYLSDAHRACANQISDWMRDAGFDEVEID-AVGNVVGRYKAADDDAKTLITGSH 259 (591)
T ss_pred HHHHHHHHHHHhccCCCCCCCCceEeeeCCHHHHHHHHHHHHHHHHcCCCeEeEC-CCCCEEEEcCCCCCCCCeEEEecc
Confidence 5677778888888621 224578999999999999998 8864 568999999553 3689999999
Q ss_pred cCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCc------ccHHHHH----
Q 021176 119 MDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGG------GGAHKVL---- 188 (316)
Q Consensus 119 ~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~------~G~~~~~---- 188 (316)
+||||.+ |+++|+ .|++++|.+++.|++.+.+++++|.|+..++|||. .|++.+.
T Consensus 260 lDTV~~g------------G~~DG~---~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~G~~~ 324 (591)
T PRK13799 260 YDTVRNG------------GKYDGR---EGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALIGDFN 324 (591)
T ss_pred ccccCCC------------CccccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHhCCCh
Confidence 9999964 899999 99999999999999999999999999999999972 4555554
Q ss_pred ----H----ccc--------------------c--ccccEEEEeccCCCCCcc--eeEeecccccccceEEEEEEEecCC
Q 021176 189 ----E----AGV--------------------L--EKVNAIFGLHVDPNLPIG--EVASRPGPLLAGSGFFEAVIGGKGG 236 (316)
Q Consensus 189 ----~----~~~--------------------~--~~~d~~~~~~~~~~~~~g--~~~~~~~~~~~G~~~~~i~v~G~~~ 236 (316)
+ +|. . .++++.+-+|++.+.... ........+++|..+++|+++|+++
T Consensus 325 ~~~~~~~d~~G~~~~~~l~~~g~~~~~~~~~~~~~~~~~a~~ElHIEQgp~Le~~~~~igvV~g~~G~~~~~Itv~Gkaa 404 (591)
T PRK13799 325 MELLDIKDADGISLREAIQHAGHCIDAIPKIARDPADVLGFIEVHIEQGPVLLELDIPLGIVTSIAGSARYICEFIGMAS 404 (591)
T ss_pred HHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCCcEEEEeeeccceEEEEEEEEECC
Confidence 1 111 0 134567778877752110 0011222456799999999999999
Q ss_pred CCCC-CC-CCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcC-CcCceeCCeEEEEEEEeccChhcHHHHHHHH
Q 021176 237 HAAI-PQ-HSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGG-GAFNVIPDSVLIGGTFRAFSKESFTQLKQRI 313 (316)
Q Consensus 237 Hs~~-p~-~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg-~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l 313 (316)
|+|. |. .+.||+..+++++..++++..+. +....+++++.|+++ .+.|+||++|++.+|+|..|..+.+.+.+++
T Consensus 405 Hag~~Pm~~r~dAi~aaa~ii~~l~~~~~~~--~~~~~v~tVG~I~~~~ga~NvIP~~a~~~~DiR~~~~e~~e~l~~~i 482 (591)
T PRK13799 405 HAGTTPMDMRKDAAAAAAEIALYIEKRAAQD--QHASLVATMGQLNVPSGSTNVIPGRCQFSLDIRAATDEIRDAAVADI 482 (591)
T ss_pred CCCCCChhhchhHHHHHHHHHHHHHHHHHhc--CCCCcEEEEEEEEecCCCCceECCEEEEEEEeeCCCHHHHHHHHHHH
Confidence 9994 64 58999999999999998875432 223357899999853 4899999999999999999999999876665
Q ss_pred h
Q 021176 314 E 314 (316)
Q Consensus 314 ~ 314 (316)
+
T Consensus 483 ~ 483 (591)
T PRK13799 483 L 483 (591)
T ss_pred H
Confidence 4
No 63
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=99.96 E-value=2.3e-28 Score=240.40 Aligned_cols=240 Identities=17% Similarity=0.159 Sum_probs=185.1
Q ss_pred HHHHHHHHHhhcCCCC-------------CcchHHHHHHHHHHHHhcCC-ceEeccCCceEEEEEcCC-C-CcEEEEEee
Q 021176 55 GWMIGIRRKIHQNPEL-------------GYQEFETSQLIRSELDKMGI-KYKHPVAVTGVVGFIGTG-E-PPFVALRAD 118 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~-------------s~~e~~~~~~l~~~l~~~G~-~~~~~~~~~~via~~~~~-~-~~~i~l~~H 118 (316)
+++.+.+.+|-+|+.+ |..+.++++|+.++|+++|+ +++.+ .-+|+++++++. + .|+|++.+|
T Consensus 181 ~r~~~~~~~l~~~~~~~~~~~~g~~R~~~s~~~~~~~~~l~~~~~~~Gl~~v~~D-~~GNl~~~~~g~~~~~~~v~~gsH 259 (591)
T PRK13590 181 NDVWDWAERLAAHSDPGYAEKGQLTVTYLTDAHRACAQQISHWMRDCGFDEVHID-AVGNVVGRYKGSTPQAKRLLTGSH 259 (591)
T ss_pred HHHHHHHHHHhcccCCCCCCCCceeeeeCCHHHHHHHHHHHHHHHHcCCCeeeEC-CCCCEEEEecCCCCCCCeEEEecc
Confidence 5667777777787652 23457899999999999999 87754 568999999653 3 489999999
Q ss_pred cCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCCC------cccHHH------
Q 021176 119 MDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEG------GGGAHK------ 186 (316)
Q Consensus 119 ~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg------~~G~~~------ 186 (316)
+||||.+ |+++|+ +|++++|.+++.|++.+..++++|.|+++++||| ..|++.
T Consensus 260 lDTV~~g------------G~~DG~---~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~~G~~~ 324 (591)
T PRK13590 260 YDTVRNG------------GKYDGR---LGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGALIGDFD 324 (591)
T ss_pred cccCCCC------------CCcccH---HHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHHhCCCh
Confidence 9999964 777888 9999999999999999988899999999999996 246664
Q ss_pred --HHH---------------ccc-----------cccccEEEEeccCCCCC---cceeEeecccccccceEEEEEEEecC
Q 021176 187 --VLE---------------AGV-----------LEKVNAIFGLHVDPNLP---IGEVASRPGPLLAGSGFFEAVIGGKG 235 (316)
Q Consensus 187 --~~~---------------~~~-----------~~~~d~~~~~~~~~~~~---~g~~~~~~~~~~~G~~~~~i~v~G~~ 235 (316)
+++ .++ .+.+.+.+-+|++++.. .+. ......+++|..+++|+++|++
T Consensus 325 ~~~~~~~d~~g~~~~~al~~~g~~~~~~~~~~~~~~~~~a~~ElHiEqg~~Le~~~~-~~gvV~~~~G~~~~~v~v~Gka 403 (591)
T PRK13590 325 PAWLDQKDADGITMREAMQHAGLCIDDIPKLRRDPARYLGFVEVHIEQGPVLNELDL-PLGIVTSINGSVRYVGEMIGMA 403 (591)
T ss_pred HHHHhccCCCCCCHHHHHHHcCCChhhccccccCCCCccEEEEEEeCCCHHHHHCCC-ceEEEeeeeccEEEEEEEEeEC
Confidence 222 111 01345667778876521 010 0111234679999999999999
Q ss_pred CCCCC-CCC-CCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEc-CCcCceeCCeEEEEEEEeccChhcHHHHHHH
Q 021176 236 GHAAI-PQH-SIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQG-GGAFNVIPDSVLIGGTFRAFSKESFTQLKQR 312 (316)
Q Consensus 236 ~Hs~~-p~~-g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~g-g~~~nviP~~a~~~~d~R~~p~~~~~~v~~~ 312 (316)
+|+|. |.. +.||+..+++++..+++.... ...++.|++.|++ |.+.|+||++|++++|+|..+..+.+.+.++
T Consensus 404 aHag~~P~~~r~dAi~aaa~~i~~l~~~~~~----~~~~v~tVG~i~~~Gg~~NVIP~~a~~~iDiR~~~~e~~e~v~~~ 479 (591)
T PRK13590 404 SHAGTTPMDRRRDAAAAVAELALYVEQRAAQ----DGDSVGTVGMLEVPGGSINVVPGRCRFSLDIRAPTDAQRDAMVAD 479 (591)
T ss_pred CCCCCCCchhcccHHHHHHHHHHHHHHHHhc----CCCcEEEEEEEEECCCCCceECCEEEEEEEeeCCCHHHHHHHHHH
Confidence 99994 654 689999999999999886422 1235779999984 5689999999999999999999999998776
Q ss_pred Hhh
Q 021176 313 IEE 315 (316)
Q Consensus 313 l~~ 315 (316)
+++
T Consensus 480 i~~ 482 (591)
T PRK13590 480 VLA 482 (591)
T ss_pred HHH
Confidence 654
No 64
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=99.80 E-value=1.4e-18 Score=157.64 Aligned_cols=256 Identities=13% Similarity=0.151 Sum_probs=176.5
Q ss_pred HHHHHHHHHhhcCCCCCc--chHHHHHHHHHHHHhcCCceEe----------cc--CCceEEEEEcC-CCCcEEEEEeec
Q 021176 55 GWMIGIRRKIHQNPELGY--QEFETSQLIRSELDKMGIKYKH----------PV--AVTGVVGFIGT-GEPPFVALRADM 119 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~----------~~--~~~~via~~~~-~~~~~i~l~~H~ 119 (316)
+++.+++.+|++.||+++ .|...+++|...|+++.+.-+. .+ ++.||+|.+.+ .++.||++.||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~pYFqehped~~~~pi~nDpygR~nv~AlVrg~~~k~tvvl~gH~ 87 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGELPYFQEHPEDLWLQPIHNDPYGRRNVFALVRGGTSKRTVVLHGHF 87 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcCchhhhChHhhcccCCCCCccccceeEEEEecCCCCceEEEeecc
Confidence 678999999999999976 5778899999999998763221 12 67899999955 456899999999
Q ss_pred CCCCCcccCCC---cccC----------------------CCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEE
Q 021176 120 DSLPLQEMVEW---EYKS----------------------KIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVV 171 (316)
Q Consensus 120 Dvvp~~~~~~w---~~~~----------------------~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~ 171 (316)
|||...+.... -|++ ..++++.|||+ |+|+|+.|++++.+.+. ...++||.
T Consensus 88 DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav~la~L~~fa~~-~~~~GNlL 166 (553)
T COG4187 88 DTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAVHLACLEEFAAR-TDRQGNLL 166 (553)
T ss_pred ceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHHHHHHHHHHhhC-CCCCCcEE
Confidence 99987653221 2221 13579999997 89999999999999886 57999999
Q ss_pred EEEecCCC-CcccHHHHHHcc--c--cccccEEEEeccCCCCCc--ceeEeecccccccceEEEEEEEecCCCCCCCCCC
Q 021176 172 LVFQPAEE-GGGGAHKVLEAG--V--LEKVNAIFGLHVDPNLPI--GEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHS 244 (316)
Q Consensus 172 ~~~~~~EE-g~~G~~~~~~~~--~--~~~~d~~~~~~~~~~~~~--g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~~p~~g 244 (316)
|+.++||| .+.|++..+... . ..++++-.+++.|...+. |.-+-....++.|..-.-.-+.|+..|.|+|..|
T Consensus 167 f~a~pdEE~~s~G~r~a~~~L~~L~kk~~l~~~~~IN~D~~~~~~dGd~~ryvYtGtiGKLLp~f~vvG~etHvG~~f~G 246 (553)
T COG4187 167 FMAVPDEEVESRGMREARPALPGLKKKFDLEYTAAINLDVTSDQGDGDQGRYVYTGTIGKLLPFFFVVGCETHVGYPFEG 246 (553)
T ss_pred EEeccchhhhcccHHHHHHHHHHHHHhhCceEEEEeccccccCCCCCccceEEEeccchhhcceeEEEeeccccCCcccC
Confidence 99999999 678888766421 1 114455555444443222 2111111223457777778899999999999999
Q ss_pred CCHHHHHHHHHHHHHHh---hhccCCCCCC--ceEEEEEEEcCCcCce-eCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 245 IDPILAASNVIVSLQHL---VSREADPLDS--QVVTVAKFQGGGAFNV-IPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 245 ~Nai~~~~~~i~~l~~~---~~~~~~~~~~--~t~~i~~i~gg~~~nv-iP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
+||...++.++..|+-. ..+....... ..+..-.++- +.|| .|.++.+.|++=+- +.+++++.++++
T Consensus 247 vnan~maSei~~~le~N~~l~dr~~Ge~t~PPs~L~qkDlKe--~Y~VqTp~~a~~~fN~l~h-~~ta~~~~d~l~ 319 (553)
T COG4187 247 VNANFMASEITRRLELNADLADRVDGEITPPPSCLEQKDLKE--SYNVQTPERAWLYFNWLYH-SRTAKELFDRLK 319 (553)
T ss_pred CCHHHHHHHHHHHhhcChhhhhhhCCeeCCCcHhhhhhhhhh--hccccCcchhhhhheehhh-cCCHHHHHHHHH
Confidence 99999999999988632 2332221111 1122222221 3343 67888888887554 566666666654
No 65
>PF07687 M20_dimer: Peptidase dimerisation domain This family only corresponds to M20 family; InterPro: IPR011650 This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the MEROPS peptidase family M20 []. This family includes a range of zinc exopeptidases: carboxypeptidases, dipeptidases and specialised aminopeptidases [].; GO: 0016787 hydrolase activity; PDB: 3GB0_A 2F7V_A 1R3N_C 2VL1_D 2V8V_C 1R43_B 2V8G_B 2V8H_D 2V8D_A 3PFE_A ....
Probab=99.73 E-value=3.6e-17 Score=126.59 Aligned_cols=96 Identities=28% Similarity=0.381 Sum_probs=87.6
Q ss_pred ccccceEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhhhccC-----CCCCCceEEEEEEEcCCcCceeCCeEEE
Q 021176 220 LLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREA-----DPLDSQVVTVAKFQGGGAFNVIPDSVLI 294 (316)
Q Consensus 220 ~~~G~~~~~i~v~G~~~Hs~~p~~g~Nai~~~~~~i~~l~~~~~~~~-----~~~~~~t~~i~~i~gg~~~nviP~~a~~ 294 (316)
+++|..+++++++|+++|+|.|+.|.||+..|++++..|+++..+.. ..+..++++++.++||...|+||++|++
T Consensus 2 g~~G~~~~~i~~~G~~~H~s~~~~g~nai~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~gG~~~n~ip~~a~~ 81 (111)
T PF07687_consen 2 GHRGVIWFRITITGKSGHSSRPEKGVNAIEAAARFLNALEELEFEWAFRPEEFFPGPPTLNIGSIEGGTAPNVIPDEATL 81 (111)
T ss_dssp EEEEEEEEEEEEESBSEETTSGGGSBCHHHHHHHHHHHHHHTTCHBTSTHHHCTCTSEEEEEEEEEEESSTTEESSEEEE
T ss_pred cCCCEEEEEEEEEeeccCCCCccCccCHHHHHHHHHHHHHHhhcccccccccccccccceeEeecccCCcCCEECCEEEE
Confidence 46799999999999999999999999999999999999998854432 4566799999999999999999999999
Q ss_pred EEEEeccChhcHHHHHHHHhh
Q 021176 295 GGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 295 ~~d~R~~p~~~~~~v~~~l~~ 315 (316)
++++|++|.++.+++.+++++
T Consensus 82 ~~~~R~~p~~~~~~i~~~i~~ 102 (111)
T PF07687_consen 82 TVDIRYPPGEDLEEIKAEIEA 102 (111)
T ss_dssp EEEEEESTCHHHHHHHHHHHH
T ss_pred EEEEECCCcchHHHHHHHHHH
Confidence 999999999999999999875
No 66
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=99.71 E-value=5.5e-16 Score=141.01 Aligned_cols=130 Identities=17% Similarity=0.169 Sum_probs=99.9
Q ss_pred HHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec-----------c--------CCceEEEEEcCCCCcEEEEEe
Q 021176 57 MIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP-----------V--------AVTGVVGFIGTGEPPFVALRA 117 (316)
Q Consensus 57 ~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-----------~--------~~~~via~~~~~~~~~i~l~~ 117 (316)
+..+...+-.-+.-|..|.++++||+++|+++|++++.. . ...||++.+++...+.|++.|
T Consensus 37 ~~~ia~~~~gR~~gS~~E~~aA~yL~~~f~~lG~~v~~q~f~~~~~~~~~~g~~~~~~~~g~nVIa~~~G~~~~~Ill~A 116 (346)
T PRK10199 37 ARHIATFFPGRMTGSPAEMLSADYLRQQFQQMGYQSDIRTFNSRYIYTARDNRKNWHNVTGSTVIAAHEGKAPQQIIIMA 116 (346)
T ss_pred HHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHCCCceEeeeccccceeecccccccccCCccceEEEEECCCCCCeEEEEE
Confidence 344444454555667789999999999999999987531 1 135799999665558899999
Q ss_pred ecCCCCCcccCCCcccCCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHcc
Q 021176 118 DMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAG 191 (316)
Q Consensus 118 H~Dvvp~~~~~~w~~~~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~ 191 (316)
|+|||+......|++.. +-++++|+ |+|++++|++++.|++. .++.+|.|+++++|| |..|+++++++.
T Consensus 117 H~DTV~p~~~~~~~~~~---~g~~~~GA~DnasGvA~lLe~ar~l~~~--~~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 117 HLDTYAPQSDADVDANL---GGLTLQGMDDNAAGLGVMLELAERLKNV--PTEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred EcCcCCCCCCCccccCC---CCcccCCccccHHHHHHHHHHHHHHhhC--CCCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 99999754334444432 22688998 69999999999999865 367899999999999 779999999863
No 67
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=99.59 E-value=4.3e-15 Score=125.64 Aligned_cols=76 Identities=36% Similarity=0.639 Sum_probs=66.9
Q ss_pred EEEeecCCCCCcccCCCccc----CCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc-cH
Q 021176 114 ALRADMDSLPLQEMVEWEYK----SKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG-GA 184 (316)
Q Consensus 114 ~l~~H~Dvvp~~~~~~w~~~----~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~-G~ 184 (316)
+|++|||||| + .++|.++ ..++|++||||+ |+++++++++++.+++.+..++++|.|+|+++|| ++. |+
T Consensus 1 ll~~H~Dtv~-~-~~~w~~~pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~ 78 (189)
T PF01546_consen 1 LLYAHMDTVP-G-PEGWKHDPFELSIEDGRLYGRGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGA 78 (189)
T ss_dssp EEEEES-BCS-T-GGGSSSSTTSEEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHH
T ss_pred CccccccccC-C-cCcCCCCCcccEEECCEEEcCCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchh
Confidence 6899999999 4 6789765 357899999997 8999999999999998888999999999999999 555 99
Q ss_pred HHHHHcc
Q 021176 185 HKVLEAG 191 (316)
Q Consensus 185 ~~~~~~~ 191 (316)
+.+++++
T Consensus 79 ~~l~~~~ 85 (189)
T PF01546_consen 79 KHLLEEG 85 (189)
T ss_dssp HHHHHHC
T ss_pred hhhhhhc
Confidence 9999974
No 68
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=99.55 E-value=1.3e-13 Score=126.91 Aligned_cols=129 Identities=20% Similarity=0.277 Sum_probs=103.6
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC-CCCcEEEEEeecCCCCC-----cc--
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT-GEPPFVALRADMDSLPL-----QE-- 126 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~-~~~~~i~l~~H~Dvvp~-----~~-- 126 (316)
+.+++++++|+++||+|+.|.+++++++++|+++|++++. +..+|+++.+.+ .++|+|+|.||||++.. .+
T Consensus 3 ~~~~~lLk~Lv~~~s~SG~E~~V~~~l~~~l~~~g~ev~~-D~~Gnlia~~~g~~~~~~v~l~aHmDevG~~V~~I~~~G 81 (343)
T TIGR03106 3 DYLTETLLALLAIPSPTGFTDAVVRYVAERLEDLGIEYEL-TRRGAIRATLPGREATPARAVVTHLDTLGAMVRELKDNG 81 (343)
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCeEEE-CCCeEEEEEECCCCCCCeEEEEEeeccccceeeEECCCC
Confidence 4588899999999999999999999999999999999886 578899998855 34579999999998743 00
Q ss_pred ------cCCCc------------------------------------------cc-----------C-------------
Q 021176 127 ------MVEWE------------------------------------------YK-----------S------------- 134 (316)
Q Consensus 127 ------~~~w~------------------------------------------~~-----------~------------- 134 (316)
-.+|+ ++ +
T Consensus 82 ~l~~~~iGG~~~~~l~g~~v~i~t~~g~~~Gvi~~~~~~~H~~~~~~~~~~~~~~~~~l~iDiG~~s~ee~~~lGV~~Gd 161 (343)
T TIGR03106 82 RLELVPIGHWSARFAEGARVTIFTDSGEFRGTILPLKASGHAFNEEIDSQPTGWDHVEVRVDARASCRADLVRLGISVGD 161 (343)
T ss_pred eEEEEecCCCcccceeCCEEEEEeCCCeEEEEECCCCCCCccCChHHccCCCCCcccEEEEECCcCCHHHHHHcCCCCCC
Confidence 00110 00 0
Q ss_pred ----------CCCCeeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccH
Q 021176 135 ----------KIPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGA 184 (316)
Q Consensus 135 ----------~~~g~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~ 184 (316)
..+|++|||+. |+++++++.+++.|++.+.+++.+|.++|+++||.+.|+
T Consensus 162 ~v~~~~~~~~~~~~~i~gr~~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG~ga 223 (343)
T TIGR03106 162 FVAFDPQPEFLANGFIVSRHLDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVGSGA 223 (343)
T ss_pred EEEECCccEEecCCEEEEEecccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCccc
Confidence 03578999986 899999999999999877778999999999999943564
No 69
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=99.53 E-value=5.4e-14 Score=131.09 Aligned_cols=246 Identities=17% Similarity=0.212 Sum_probs=178.7
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCce-Eec----------cCCceEEEEEcCC--CCcEEEEEeecCC
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKY-KHP----------VAVTGVVGFIGTG--EPPFVALRADMDS 121 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~-~~~----------~~~~~via~~~~~--~~~~i~l~~H~Dv 121 (316)
+.+++.+.++++||+.|++|++++.++.++++.+|+.+ ... .+..-+.+.+++. .-|++.|.+|+||
T Consensus 5 ~~l~~~F~~~~kI~~~S~~e~~~~p~~~~~~k~~~~~v~dE~~~i~~~~~a~~~~~~~~~~L~a~~d~V~~i~~~sh~Dt 84 (414)
T COG2195 5 ERLLDRFLELVKIPTQSKHEKAVAPSTVGQAKLLGLLVEDELGNIGLKKPATAGENYVPAVLQAHLDMVPEIGFISHHDT 84 (414)
T ss_pred HHHHHHHHHHeeCCCCCCCccccccccHHHHHHcCchhhhhhccccccccccCCCCeeeEEeeccccccccccccccccc
Confidence 67999999999999999999999999999999999988 321 1111245556543 2388999999999
Q ss_pred CCCcc----cCCC----------------------cccC----------CCCCe-eeecCchHHHHHHHHHHHHHHhcc-
Q 021176 122 LPLQE----MVEW----------------------EYKS----------KIPGK-MHACGHDGHVTMLLGAAKILQEHR- 163 (316)
Q Consensus 122 vp~~~----~~~w----------------------~~~~----------~~~g~-l~grG~k~~~a~~l~a~~~l~~~~- 163 (316)
+|... ...| .++. ..||. +-|-++|+|++.++.++..+++..
T Consensus 85 ~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~~~~~P~~~~~t~~~ei~~dGa~LLgaD~kAGia~i~~al~~~~~~~~ 164 (414)
T COG2195 85 VPDPIGPNVNPQILKATLGADNIGLAIGLAVLSPEHFPLEVLLTGDEEITTDGATLLGADDKAGIAEIMTALSVLREKHP 164 (414)
T ss_pred cccccccccCCceeeeccCcchhhhhhHHhhcCcccCCceeeeecceEEeccCccccCCcchhHHHHHHHHHHHHhhcCc
Confidence 96211 1112 0110 01232 334445899999999999999653
Q ss_pred ccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCCCCCcceeEeecccccccceEEEEEEEecCCCCC-CC
Q 021176 164 EELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAA-IP 241 (316)
Q Consensus 164 ~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~~i~v~G~~~Hs~-~p 241 (316)
.-+.++|++.|+++|| |++|+..+.-..+ .++..+.+ | +.+.|.+... ..+...+++++.|+.+|++ .+
T Consensus 165 ~i~h~~i~~g~s~~Ee~g~rg~~~~~~a~f--~a~~ay~i--D-Gg~~g~i~~e----a~~~~~~~~~~~g~~~h~~~a~ 235 (414)
T COG2195 165 EIPHGGIRGGFSPDEEIGGRGAANKDVARF--LADFAYTL--D-GGPVGEIPRE----AFNAAAVRATIVGPNVHPGSAK 235 (414)
T ss_pred cccccCeEEEecchHHhhhhhhhhccHHhh--hcceeEec--C-CCccCeeeee----ccchheeeeeeeccCcCccchH
Confidence 4578999999999999 6699988765422 34455543 3 3456666533 2367789999999999999 58
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhccCCCCCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHh
Q 021176 242 QHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIE 314 (316)
Q Consensus 242 ~~g~Nai~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~ 314 (316)
....||+..+.++...+.... ....++.+.+...++...|.|.+++.....+|.......+...+.++
T Consensus 236 ~~~i~a~~~a~e~~~~~~~~~-----~~e~t~~~~Gv~~~~~~~~~V~~~s~~~~~iR~~d~~~~~s~~~~~~ 303 (414)
T COG2195 236 GKMINALLLAAEFILELPLEE-----VPELTEGPEGVYHLGDSTNSVEETSLNLAIIRDFDNLLFRARKDSMK 303 (414)
T ss_pred HHHhhHHHhhhhhhhcCCccc-----ccccccccceEEeccccccchhhhhhhhhhhhhcchhHHHHhHHHHH
Confidence 888999998888887765432 11346778888899999999999999999999988866665555544
No 70
>PRK09961 exoaminopeptidase; Provisional
Probab=99.40 E-value=1.1e-11 Score=114.44 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=107.7
Q ss_pred HHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCC-----cc-------
Q 021176 59 GIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL-----QE------- 126 (316)
Q Consensus 59 ~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~-----~~------- 126 (316)
+++++|+++||+|++|.+++++++++|+++|.+++. +..+|+++.+.+.++|+|+|.+|||+|+. .+
T Consensus 4 ~~L~~L~~~~s~sG~E~~v~~~i~~~l~~~~~~v~~-D~~Gnvi~~~~g~~~~~v~l~aHmDevg~~V~~I~~~G~l~~~ 82 (344)
T PRK09961 4 SLLKALSEADAIASSEQEVRQILLEEADRLQKEVRF-DGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 82 (344)
T ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEEcCCCCCEEEEEeccceeceEEEEECCCceEEEE
Confidence 579999999999999999999999999999999875 57889999885544579999999999853 11
Q ss_pred -cCCCcc-------------------------------c---------C-----------------------CCCCeeee
Q 021176 127 -MVEWEY-------------------------------K---------S-----------------------KIPGKMHA 142 (316)
Q Consensus 127 -~~~w~~-------------------------------~---------~-----------------------~~~g~l~g 142 (316)
-.+|.. + + ..++++.|
T Consensus 83 ~vGG~~~~~~~~~~v~i~~~~g~~i~Gvi~~~~~~~~~~~l~iDiG~~s~ee~~~~GI~~Gd~v~~~~~~~~~~~~~i~g 162 (344)
T PRK09961 83 PVGNVRMAARQLQPVRITTREECKIPGLLNGDRQGNDVSAMRVDIGARSYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 162 (344)
T ss_pred eCCCccccccCCCEEEEEeCCCCEeeEEEChhhcCCCHHHEEEEcCCCCHHHHHhcCCCCCCEEEEcceeEEecCCEEEE
Confidence 011210 0 0 01245556
Q ss_pred cCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccC
Q 021176 143 CGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVD 205 (316)
Q Consensus 143 rG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~ 205 (316)
+.- +.++++++.+++.+++. +++.++.++|+..|| |.+|++..... . ++|.++.++..
T Consensus 163 kalDnR~g~~~lle~l~~l~~~--~~~~~v~~~~tvqEEvG~rGa~~aa~~-i--~pd~~I~vDv~ 223 (344)
T PRK09961 163 KAFDDRLGCYLLVTLLRELHDA--ELPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDTA 223 (344)
T ss_pred eechhhHhHHHHHHHHHHhhhc--CCCceEEEEEEcccccchHHHHHHHhc-c--CCCEEEEEecc
Confidence 654 59999999999999765 478999999999999 77898877543 2 56777776653
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=99.36 E-value=2.2e-11 Score=111.33 Aligned_cols=145 Identities=21% Similarity=0.275 Sum_probs=109.4
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCC-cEEEEEeecCCCCC-----cc--
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEP-PFVALRADMDSLPL-----QE-- 126 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~-~~i~l~~H~Dvvp~-----~~-- 126 (316)
+++.+++++|+.+|++|+.|.++.+++++.|++++.++++ +..+|+++.+++.++ |.|++.+|||.+-. .+
T Consensus 2 ~~~~~~LkeL~~~~gpsG~E~eVr~~~~~el~~~~~ev~~-D~lGnlia~~~g~~g~~~imi~AHmDEiG~mV~~I~~~G 80 (355)
T COG1363 2 EELLELLKELLEAPGPSGYEEEVRDVLKEELEPLGDEVEV-DRLGNLIAKKGGKNGPPKVMIAAHMDEIGFMVKEIEDDG 80 (355)
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHhCCceEE-cCCCcEEEEecCCCCCccEEEEeecceeeeeEEEECCCc
Confidence 4688899999999999999999999999999999999875 578899999977333 66999999998622 00
Q ss_pred ------cCCCccc------------------------C------C-----------------------------------
Q 021176 127 ------MVEWEYK------------------------S------K----------------------------------- 135 (316)
Q Consensus 127 ------~~~w~~~------------------------~------~----------------------------------- 135 (316)
-.+|... + .
T Consensus 81 ~Lr~~~IGG~~~~~~~gq~v~i~t~~g~~i~GvIg~~p~H~~~~~~~~~~~~~~~el~iDiga~skeea~~lGI~vGd~v 160 (355)
T COG1363 81 FLRFVPIGGWDPQVLEGQRVTIHTDKGKKIRGVIGSKPPHLLKEEAERKKPPEWDELFIDIGASSKEEAEELGIRVGDFV 160 (355)
T ss_pred eEEEEEcCCcChhhccCcEEEEEeCCCcEEeeeEcccCccccCccccccCCCchhhEEEECCcCCHHHHHhcCCCCCCEE
Confidence 0123200 0 0
Q ss_pred ---------CCCeeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEec
Q 021176 136 ---------IPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLH 203 (316)
Q Consensus 136 ---------~~g~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~ 203 (316)
.++++-++.- +.+|+++|.+++.| + +.+++.++.|+|++.|| |..|++....+ -++|.++.++
T Consensus 161 ~~~~~~~~l~~~~i~skalDdR~gva~lle~lk~l-~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~---i~pd~aiavd 235 (355)
T COG1363 161 VFDPRFRELANGRVVSKALDDRAGVAALLELLKEL-K-GIELPADVYFVASVQEEVGLRGAKTSAFR---IKPDIAIAVD 235 (355)
T ss_pred EEcCceEEecCCcEEeeeccchHhHHHHHHHHHHh-c-cCCCCceEEEEEecchhhccchhhccccc---cCCCEEEEEe
Confidence 1133434432 69999999999999 4 67899999999999999 77888876543 2567777655
Q ss_pred cC
Q 021176 204 VD 205 (316)
Q Consensus 204 ~~ 205 (316)
..
T Consensus 236 ~~ 237 (355)
T COG1363 236 VT 237 (355)
T ss_pred cc
Confidence 43
No 72
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=99.33 E-value=5.3e-11 Score=109.81 Aligned_cols=142 Identities=18% Similarity=0.248 Sum_probs=106.5
Q ss_pred HHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC--CCCcEEEEEeecCCCCC-----cc-----
Q 021176 59 GIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT--GEPPFVALRADMDSLPL-----QE----- 126 (316)
Q Consensus 59 ~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~--~~~~~i~l~~H~Dvvp~-----~~----- 126 (316)
+++++|+++|++|+.|.+++++++++|++++.++++ +..+|+++.+.+ ..+|+|+|.+|||+|+. .+
T Consensus 2 ~~L~~L~~~~gpSG~E~~v~~~i~~~l~~~~~~v~~-D~~GNvia~~~g~~~~~~~vml~AHmDeVGf~V~~I~~~G~l~ 80 (350)
T TIGR03107 2 NKIKEVTELQGTSGFEHPIRDYLRQDITPLVDQVET-DGLGGIFGIKESQVENAPRVMVAAHMDEVGFMVSQIKPDGTFR 80 (350)
T ss_pred hHHHHHHhCCCCCCCcHHHHHHHHHHHHhhCCEEEE-CCCCCEEEEecCCCCCCCEEEEEecccEeCEEEEEECCCceEE
Confidence 468999999999999999999999999999998775 567899998855 33589999999998642 00
Q ss_pred ---cCCCcc------------------------------c--C-C-----------------------------------
Q 021176 127 ---MVEWEY------------------------------K--S-K----------------------------------- 135 (316)
Q Consensus 127 ---~~~w~~------------------------------~--~-~----------------------------------- 135 (316)
-.+|.. + . +
T Consensus 81 ~~~vGG~~~~~l~gq~V~i~t~~g~~i~GViG~~~~Hl~~~~~~~~~~~~~~~l~IDiGa~skee~~~~GI~vGd~v~~~ 160 (350)
T TIGR03107 81 VVELGGWNPLVVSSQRFTLFTRKGKKYPVISGSVPPHLLRGSSGGPQLPAVSDILFDGGFTNKDEAWSFGVRPGDVIVPQ 160 (350)
T ss_pred EEeCCCccccccCCcEEEEEeCCCCEEEEEEeCCcccccChhhcccccCChhhEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 011210 0 0 0
Q ss_pred -------CCCeeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccC
Q 021176 136 -------IPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVD 205 (316)
Q Consensus 136 -------~~g~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~ 205 (316)
.++++.|+.- +.|+++++.+++.+++. +++.++.++|++.|| |.+|++..... -++|.+++++..
T Consensus 161 ~~~~~~~~~~~i~~kalDdR~g~a~l~e~l~~l~~~--~~~~~l~~~~tvqEEvG~rGA~~aa~~---i~pD~aI~vDv~ 235 (350)
T TIGR03107 161 TETILTANGKNVISKAWDNRYGVLMILELLESLKDQ--ELPNTLIAGANVQEEVGLRGAHVSTTK---FNPDIFFAVDCS 235 (350)
T ss_pred CCeEEEcCCCEEEEeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEEChhhcCchhhhhHHhh---CCCCEEEEEecC
Confidence 1134555554 59999999999999865 478899999999999 77999976543 256888876654
Q ss_pred C
Q 021176 206 P 206 (316)
Q Consensus 206 ~ 206 (316)
.
T Consensus 236 ~ 236 (350)
T TIGR03107 236 P 236 (350)
T ss_pred C
Confidence 3
No 73
>PRK09864 putative peptidase; Provisional
Probab=99.31 E-value=9.2e-11 Score=108.10 Aligned_cols=140 Identities=18% Similarity=0.159 Sum_probs=105.3
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEeccCCceEEEEEcCCCCcEEEEEeecCCCCC-----cc------
Q 021176 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGTGEPPFVALRADMDSLPL-----QE------ 126 (316)
Q Consensus 58 ~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~~~~~~i~l~~H~Dvvp~-----~~------ 126 (316)
.+++++|+++|++|+.|.++++++.++|+.++.+++. +..+|+++..+ ..+|+|+|.+|||.++. .+
T Consensus 3 ~~~L~~L~~~~g~SG~E~~v~~~l~~~l~~~~dev~~-D~~GNli~~~g-~~~~kvml~AHmDevG~mV~~I~~~G~l~~ 80 (356)
T PRK09864 3 IELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITF-DGLGSFVARKG-NKGPKVAVVGHMDEVGFMVTHIDESGFLRF 80 (356)
T ss_pred HHHHHHHHcCCCCCCchHHHHHHHHHHHHHhCCEEEE-CCCCCEEEEeC-CCCcEEEEEecccccCEEEEEECCCCeEEE
Confidence 3569999999999999999999999999999998765 56789999873 33479999999998742 00
Q ss_pred --cCCCccc-------------C---------------------C-----------------------------------
Q 021176 127 --MVEWEYK-------------S---------------------K----------------------------------- 135 (316)
Q Consensus 127 --~~~w~~~-------------~---------------------~----------------------------------- 135 (316)
-.+|.-. . +
T Consensus 81 ~~lGG~~~~~l~~q~V~i~t~~g~~v~GVig~~~~H~~~~~~~~k~~~~~~l~IDiGa~s~ee~~~~GV~vGD~v~~~~~ 160 (356)
T PRK09864 81 TTIGGWWNQSMLNHRVTIRTHKGVKIPGVIGSVAPHALTEKQKQQPLSFDEMFIDIGANSREEVEKRGVEIGDFISPEAN 160 (356)
T ss_pred EeCCCcCccccCCCEEEEEeCCCCEEEEEEeCCccccCChhHcccCCChhHEEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 1122100 0 0
Q ss_pred ----CCCeeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEeccCC
Q 021176 136 ----IPGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHVDP 206 (316)
Q Consensus 136 ----~~g~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~~~ 206 (316)
.++++.|+.- +.|+++++.+++.+++ ++.++.++|++.|| |.+|++.....- ++|.+++++...
T Consensus 161 ~~~l~~~~i~~kalDnR~g~~~lle~l~~l~~----~~~~vy~v~TvQEEvGlrGA~~aa~~i---~PDiaIavDvt~ 231 (356)
T PRK09864 161 FACWGEDKVVGKALDNRIGCAMMAELLQTVNN----PEITLYGVGSVEEEVGLRGAQTSAEHI---KPDVVIVLDTAV 231 (356)
T ss_pred cEEEcCCEEEEEeCccHHHHHHHHHHHHHhhc----CCCeEEEEEEcchhcchHHHHHHHhcC---CCCEEEEEeccc
Confidence 1245555553 5999999999999865 77999999999999 779998776532 568888766543
No 74
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.45 E-value=1.6e-06 Score=86.49 Aligned_cols=133 Identities=23% Similarity=0.302 Sum_probs=92.3
Q ss_pred HHHHHHHHhhcC---CCCCc-chHHHHHHHHHHHHhcCCc-------eEec-----------------cCCceEEEEEcC
Q 021176 56 WMIGIRRKIHQN---PELGY-QEFETSQLIRSELDKMGIK-------YKHP-----------------VAVTGVVGFIGT 107 (316)
Q Consensus 56 ~~~~~~~~l~~i---ps~s~-~e~~~~~~l~~~l~~~G~~-------~~~~-----------------~~~~~via~~~~ 107 (316)
+..+.+.++.++ |..|. +|..+.+++.+.+.++.=. .+.+ -+-.|++.++++
T Consensus 58 rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q~~sg~~~~~~~~~~Y~~i~NIvVki~~ 137 (834)
T KOG2194|consen 58 RALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQSASGSFILEGMTLVYQNISNIVVKISP 137 (834)
T ss_pred HHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheeceeeccceeeehhhhheeeeeeeEEEecCC
Confidence 345555555555 44443 4567888888877664211 1110 124578888854
Q ss_pred CC---CcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCch-HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc
Q 021176 108 GE---PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD-GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG 182 (316)
Q Consensus 108 ~~---~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k-~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~ 182 (316)
+. +-.|++++|+|+||.+. |-|.+ .++|.+|++++.+.+....+..+|+|+|...|| +..
T Consensus 138 k~~~~~~~lLlnaHfDSvpt~~---------------gAtDDg~~va~mLe~lRv~s~~~~~l~~~vVFLfNgaEE~~L~ 202 (834)
T KOG2194|consen 138 KNGNDKNALLLNAHFDSVPTGP---------------GATDDGSGVASMLEALRVLSKSDKLLTHSVVFLFNGAEESGLL 202 (834)
T ss_pred CCCCccceeeeeccccccCCCC---------------CCCcchhHHHHHHHHHHHhhcCCCcccccEEEEecCcccchhh
Confidence 32 24799999999999652 44443 778999999999998887889999999999999 668
Q ss_pred cHHHHHHcccc-ccccEEEEec
Q 021176 183 GAHKVLEAGVL-EKVNAIFGLH 203 (316)
Q Consensus 183 G~~~~~~~~~~-~~~d~~~~~~ 203 (316)
|+..++.++.. +.+.+++.++
T Consensus 203 gsH~FItQH~w~~~~ka~INLe 224 (834)
T KOG2194|consen 203 GSHAFITQHPWSKNIKAVINLE 224 (834)
T ss_pred hcccceecChhhhhhheEEecc
Confidence 99999885533 3566666544
No 75
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.39 E-value=1.1e-06 Score=73.69 Aligned_cols=82 Identities=28% Similarity=0.430 Sum_probs=60.1
Q ss_pred EEEEEeecCCCCCcccCCCcccCCCCCeeeecCc---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHH
Q 021176 112 FVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKV 187 (316)
Q Consensus 112 ~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~ 187 (316)
.|++.+|+|+++ +... + -++.|+ -.|++++|+.++.|++.+.+++++|+|+|...|| |..|++++
T Consensus 2 ~ivi~aH~Ds~~-~~~~---------~-~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~ 70 (179)
T PF04389_consen 2 YIVIGAHYDSVG-GDAD---------G-SWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAF 70 (179)
T ss_dssp EEEEEEE--BES-CCC----------T-CSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHH
T ss_pred EEEEEeecCCCC-CcCC---------C-cccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHH
Confidence 689999999988 2211 2 346666 3999999999999999887889999999999999 88999999
Q ss_pred HHcc--ccccccEEEEecc
Q 021176 188 LEAG--VLEKVNAIFGLHV 204 (316)
Q Consensus 188 ~~~~--~~~~~d~~~~~~~ 204 (316)
++.. ..+++.+++.+++
T Consensus 71 ~~~~~~~~~~~~~~inlD~ 89 (179)
T PF04389_consen 71 VEHDHEELDNIAAVINLDM 89 (179)
T ss_dssp HHHHHCHHHHEEEEEEECS
T ss_pred HHhhhcccccceeEEeccc
Confidence 9732 2224556665543
No 76
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=98.10 E-value=2.6e-05 Score=70.60 Aligned_cols=63 Identities=25% Similarity=0.277 Sum_probs=49.1
Q ss_pred CCeeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccccccccEEEEecc
Q 021176 137 PGKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGVLEKVNAIFGLHV 204 (316)
Q Consensus 137 ~g~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~~~~~d~~~~~~~ 204 (316)
++++.|+.. ..++++++.+++.+++.+ ++.+++|+|++.|| |..|+......- ++|..+.++.
T Consensus 125 ~~~i~gkalDdR~g~~~lle~l~~l~~~~--~~~~v~~v~tvqEEvG~rGA~~aa~~i---~PD~ai~vD~ 190 (292)
T PF05343_consen 125 NGRIVGKALDDRAGCAVLLELLRELKEKE--LDVDVYFVFTVQEEVGLRGAKTAAFRI---KPDIAIAVDV 190 (292)
T ss_dssp TTEEEETTHHHHHHHHHHHHHHHHHTTSS---SSEEEEEEESSCTTTSHHHHHHHHHH----CSEEEEEEE
T ss_pred CCEEEEEeCCchhHHHHHHHHHHHHhhcC--CCceEEEEEEeeeeecCcceeeccccc---CCCEEEEEee
Confidence 356778876 599999999999998864 56999999999999 779999876542 4677776554
No 77
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=97.45 E-value=0.0054 Score=53.95 Aligned_cols=108 Identities=18% Similarity=0.213 Sum_probs=78.5
Q ss_pred cchHHHHHHHHHHHHhcCCceEecc----------CCceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcccCCCCCe-e
Q 021176 72 YQEFETSQLIRSELDKMGIKYKHPV----------AVTGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGK-M 140 (316)
Q Consensus 72 ~~e~~~~~~l~~~l~~~G~~~~~~~----------~~~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~-l 140 (316)
.+-.++.+||.+.|+++|+.++.+. .-.|+++++.......+++.+|+|+--... +. +
T Consensus 69 ~g~~~vr~~i~~~l~~l~w~ve~~~f~~~tp~g~~~f~nii~tl~~~A~r~lVlachydsk~~p~-----------~~~v 137 (338)
T KOG3946|consen 69 PGSRQVRRFIIQHLRNLGWAVETDAFTDNTPLGTRNFNNLIATLDPNASRYLVLACHYDSKIFPG-----------GMFV 137 (338)
T ss_pred CccHHHHHHHHHHHHhcCceeeeccccccCcceeeeeeeEEEecCCCcchheeeecccccccCCC-----------cceE
Confidence 4557889999999999999988521 124788888665457899999999963221 22 3
Q ss_pred eecCchHHHHHHHHHHHHHHhcc----ccCCceEEEEEecCCCC---------cccHHHHHHc
Q 021176 141 HACGHDGHVTMLLGAAKILQEHR----EELKGTVVLVFQPAEEG---------GGGAHKVLEA 190 (316)
Q Consensus 141 ~grG~k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EEg---------~~G~~~~~~~ 190 (316)
-+-|+..++|++++.++++.+.- ......+.++|.-+||. ..|++++.++
T Consensus 138 gatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGEEAf~eW~p~DSlYGsRhLA~~ 200 (338)
T KOG3946|consen 138 GATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGEEAFEEWGPEDSLYGSRHLAAK 200 (338)
T ss_pred eeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccHHHHhhcCCccccchHHHHHHH
Confidence 34455689999999999886532 23446788999999982 1599999875
No 78
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=97.06 E-value=0.0073 Score=56.14 Aligned_cols=115 Identities=19% Similarity=0.256 Sum_probs=77.2
Q ss_pred HHHHHHHHhcCCceEec---------cCCceEEEEEcCC--------CCcEEEEEeecCCCCCcccCCCcccCCCCCeee
Q 021176 79 QLIRSELDKMGIKYKHP---------VAVTGVVGFIGTG--------EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMH 141 (316)
Q Consensus 79 ~~l~~~l~~~G~~~~~~---------~~~~~via~~~~~--------~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~ 141 (316)
+.+.......|+..... ..-.|+.+++.++ .-|+|++.+|+||..+-+ |.--
T Consensus 165 ~~ll~Tasangy~iv~sg~sp~a~~s~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap-----------~lsv 233 (555)
T KOG2526|consen 165 QHLLQTASANGYSIVSSGQSPEAPPSYKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAP-----------GLSV 233 (555)
T ss_pred HHHHhhhccCcEEEEecCCCcccCCCCccceEEeecccccccccccccCCeEEEEEeccccccCC-----------CCCC
Confidence 44555556667765431 1245788888521 239999999999987643 3323
Q ss_pred ecCc-hHHHHHHHHHHHHHHhcc----ccCCceEEEEEecCCC-CcccHHHHHHcc---ccccccEEEEecc
Q 021176 142 ACGH-DGHVTMLLGAAKILQEHR----EELKGTVVLVFQPAEE-GGGGAHKVLEAG---VLEKVNAIFGLHV 204 (316)
Q Consensus 142 grG~-k~~~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE-g~~G~~~~~~~~---~~~~~d~~~~~~~ 204 (316)
|-++ .+|++++|..++.+.+.- -..+.|+.|+.+.+-- .-.|++.+++-- ..+.+|+++|++.
T Consensus 234 gADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~lt~aG~lNyqGTkkWLe~dd~~lq~nVdfaiCLdt 305 (555)
T KOG2526|consen 234 GADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFILTAAGKLNYQGTKKWLEFDDADLQKNVDFAICLDT 305 (555)
T ss_pred CCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEEEccCccccccchhhhhhcchHHHHhcccEEEEhhh
Confidence 4444 378889999999887542 3468899999998877 557888888621 2236888888653
No 79
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=96.91 E-value=0.0038 Score=59.81 Aligned_cols=44 Identities=32% Similarity=0.268 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHHHHHHccc
Q 021176 147 GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAHKVLEAGV 192 (316)
Q Consensus 147 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~~~~~~~~ 192 (316)
.|++++|++++.|++.. ++.+|+|++...|| |..|+.+++.+..
T Consensus 231 sGva~llEiAr~l~~~~--p~~~v~f~~~~aEE~Gl~GS~~~~~~~~ 275 (435)
T COG2234 231 SGVAALLELARVLKGNP--PKRTVRFVAFGAEESGLLGSEAYVKRLS 275 (435)
T ss_pred HHHHHHHHHHHHHhcCC--CCceEEEEEecchhhcccccHHHHhcCC
Confidence 89999999999999875 89999999999999 8899999998764
No 80
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=96.23 E-value=0.015 Score=58.51 Aligned_cols=78 Identities=22% Similarity=0.278 Sum_probs=58.1
Q ss_pred CceEEEEEcCC--CCcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHH---HhccccCCceEEE
Q 021176 98 VTGVVGFIGTG--EPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKIL---QEHREELKGTVVL 172 (316)
Q Consensus 98 ~~~via~~~~~--~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l---~~~~~~~~~~i~~ 172 (316)
-.|+++.+.+. +..-|++.+|.|..-.| .+ ....|++.++...+.+ ++.+.+|.++|+|
T Consensus 338 i~NIig~I~Gs~epD~~ViigahrDSw~~G-------------a~---dp~sGta~Ll~i~~~~~~~~k~gwrP~RtI~F 401 (702)
T KOG2195|consen 338 IQNIIGKIEGSEEPDRYVIIGAHRDSWTFG-------------AI---DPNSGTALLLEIARALSKLKKRGWRPRRTILF 401 (702)
T ss_pred eeeEEEEEecCcCCCeEEEEeccccccccC-------------Cc---CCCccHHHHHHHHHHHHHHHHcCCCccceEEE
Confidence 35899999653 45789999999986532 11 1125566666665544 5678999999999
Q ss_pred EEecCCC-CcccHHHHHHcc
Q 021176 173 VFQPAEE-GGGGAHKVLEAG 191 (316)
Q Consensus 173 ~~~~~EE-g~~G~~~~~~~~ 191 (316)
+...+|| |..|+.++++..
T Consensus 402 ~sWdAeEfGliGStE~~E~~ 421 (702)
T KOG2195|consen 402 ASWDAEEFGLLGSTEWAEEY 421 (702)
T ss_pred EEccchhccccccHHHHHHH
Confidence 9999999 889999998854
No 81
>PRK00913 multifunctional aminopeptidase A; Provisional
Probab=95.80 E-value=0.24 Score=47.87 Aligned_cols=129 Identities=15% Similarity=0.150 Sum_probs=83.1
Q ss_pred HHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEec-------cCCceEEEEEcCC-CCcEEEEEee
Q 021176 47 FAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHP-------VAVTGVVGFIGTG-EPPFVALRAD 118 (316)
Q Consensus 47 ~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-------~~~~~via~~~~~-~~~~i~l~~H 118 (316)
.++.-+.+.+.+.+.|+|++.|+---.....++++++.+++.|+++++. .+-+.+++.=.++ ..|.++..-+
T Consensus 163 ~~~~~~~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~prli~l~Y 242 (483)
T PRK00913 163 AIAHGEAIAEGVNLARDLVNEPPNILTPAYLAERAKELAKEYGLEVEVLDEKEMEKLGMGALLAVGQGSANPPRLIVLEY 242 (483)
T ss_pred HHHHHHHHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHhcCCEEEEEeHHHHHhCCCCcEEEEeccCCCCCeEEEEEE
Confidence 3333334478899999999999866667788999999999999998752 2334455554333 3355555544
Q ss_pred cCC----CCCcccCCCcccC----CCC-Ceeee-cCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 119 MDS----LPLQEMVEWEYKS----KIP-GKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 119 ~Dv----vp~~~~~~w~~~~----~~~-g~l~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
.-. +-+| .+-.|++ .+. ..+.+ ++..+|.|+.+++++++.+.+ ++.||..++...|=
T Consensus 243 ~g~~~~i~LVG--KGITFDsGG~slKp~~~M~~MK~DM~GAAaVlga~~aia~lk--l~vnV~~v~~l~EN 309 (483)
T PRK00913 243 KGGKKPIALVG--KGLTFDSGGISLKPAAGMDEMKYDMGGAAAVLGTMRALAELK--LPVNVVGVVAACEN 309 (483)
T ss_pred CCCCCeEEEEc--CceEecCCCccCCCCcChhhcccccHhHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 311 1111 1233442 111 11221 112499999999999999875 78999999988887
No 82
>cd00433 Peptidase_M17 Cytosol aminopeptidase family, N-terminal and catalytic domains. Family M17 contains zinc- and manganese-dependent exopeptidases ( EC 3.4.11.1), including leucine aminopeptidase. They catalyze removal of amino acids from the N-terminus of a protein and play a key role in protein degradation and in the metabolism of biologically active peptides. They do not contain HEXXH motif (which is used as one of the signature patterns to group the peptidase families) in the metal-binding site. The two associated zinc ions and the active site are entirely enclosed within the C-terminal catalytic domain in leucine aminopeptidase. The enzyme is a hexamer, with the catalytic domains clustered around the three-fold axis, and the two trimers related to one another by a two-fold rotation. The N-terminal domain is structurally similar to the ADP-ribose binding Macro domain. This family includes proteins from bacteria, archaea, animals and plants.
Probab=95.19 E-value=0.74 Score=44.55 Aligned_cols=123 Identities=18% Similarity=0.187 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEecc-------CCceEEEEEcCC-CCcEEEEEeecCCCCC
Q 021176 53 LVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------AVTGVVGFIGTG-EPPFVALRADMDSLPL 124 (316)
Q Consensus 53 ~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~~via~~~~~-~~~~i~l~~H~Dvvp~ 124 (316)
.+.+.+.+.|+|++-|+---.....++++++.+++.|+++++.+ +.+.+++.=.++ ..|.++..-+...-+.
T Consensus 152 ~~a~~~~~aRdL~n~P~n~~tP~~~a~~a~~l~~~~g~~v~V~~~~~l~~~gmg~~laVg~GS~~~p~lv~l~Y~g~~~~ 231 (468)
T cd00433 152 AIAEGVNLARDLVNTPANDLTPTYLAEEAKELAKELGVKVEVLDEKELEELGMGALLAVGKGSEEPPRLIVLEYKGKGAS 231 (468)
T ss_pred HHHHHHHHHHHhhcCCcccCCHHHHHHHHHHHHHhcCCEEEEEcHHHHHhCCCCceeeecccCCCCCEEEEEEECCCCCC
Confidence 34788999999999998766778899999999999999988622 344455554333 3466665555432211
Q ss_pred cc-----cCCCcccCCCCCee--eecC---c---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 125 QE-----MVEWEYKSKIPGKM--HACG---H---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 125 ~~-----~~~w~~~~~~~g~l--~grG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
.. ..+-.|++ +|.- -+.+ + ++|.|+.+++++++.+.+ ++.||..++...|=
T Consensus 232 ~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlga~~aia~l~--~~vnV~~i~~~~EN 295 (468)
T cd00433 232 KKPIALVGKGITFDT--GGLSLKPAAGMDGMKYDMGGAAAVLGAMKAIAELK--LPVNVVGVLPLAEN 295 (468)
T ss_pred CCcEEEEcCceEecC--CCccccCccChhhccccchhHHHHHHHHHHHHHcC--CCceEEEEEEeeec
Confidence 10 01222331 1110 0222 2 499999999999999875 68999999888887
No 83
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=94.75 E-value=0.13 Score=45.10 Aligned_cols=66 Identities=24% Similarity=0.321 Sum_probs=51.8
Q ss_pred cEEEEEeecCCCCCcccCCCcccCCCCCeeeecCc---hHHHHHHHHHHHHHHhc---cccCCceEEEEEecCCC-Cccc
Q 021176 111 PFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGH---DGHVTMLLGAAKILQEH---REELKGTVVLVFQPAEE-GGGG 183 (316)
Q Consensus 111 ~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~~EE-g~~G 183 (316)
|.|+..+.||+.-.-+ +. +.|+ -.|++++|+++++|.+. ...++++|.|.|..+|- +-.|
T Consensus 1 ~iIlv~armDs~s~F~-----------~~--s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiG 67 (234)
T PF05450_consen 1 PIILVVARMDSFSFFH-----------DL--SPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIG 67 (234)
T ss_pred CEEEEEecccchhccc-----------CC--CCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccc
Confidence 6789999999875421 22 4454 38999999999999865 23578999999999999 7788
Q ss_pred HHHHHH
Q 021176 184 AHKVLE 189 (316)
Q Consensus 184 ~~~~~~ 189 (316)
+..++.
T Consensus 68 S~R~vy 73 (234)
T PF05450_consen 68 SSRFVY 73 (234)
T ss_pred hHHHHH
Confidence 888874
No 84
>PF00883 Peptidase_M17: Cytosol aminopeptidase family, catalytic domain; InterPro: IPR000819 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to the MEROPS peptidase family M17 (leucyl aminopeptidase family, clan MF), the type example being leucyl aminopeptidase from Bos taurus (Bovine). Aminopeptidases are exopeptidases involved in the processing and regular turnover of intracellular proteins, although their precise role in cellular metabolism is unclear [, ]. Leucine aminopeptidases cleave leucine residues from the N-terminal of polypeptide chains, but substantial rates are evident for all amino acids []. The enzymes exist as homo-hexamers, comprising 2 trimers stacked on top of one another []. Each monomer binds 2 zinc ions and folds into 2 alpha/beta-type quasi-spherical globular domains, producing a comma-like shape []. The N-terminal 150 residues form a 5-stranded beta-sheet with 4 parallel and 1 anti-parallel strand sandwiched between 4 alpha-helices []. An alpha-helix extends into the C-terminal domain, which comprises a central 8-stranded saddle-shaped beta-sheet sandwiched between groups of helices, forming the monomer hydrophobic core []. A 3-stranded beta-sheet resides on the surface of the monomer, where it interacts with other members of the hexamer []. The 2 zinc ions and the active site are entirely located in the C-terminal catalytic domain [].; GO: 0004177 aminopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 3KZW_L 3KQX_C 3KQZ_L 3KR4_I 3KR5_J 3T8W_C 3H8F_D 3H8G_A 3H8E_B 3IJ3_A ....
Probab=94.51 E-value=0.53 Score=42.81 Aligned_cols=110 Identities=21% Similarity=0.208 Sum_probs=70.3
Q ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEecc-------C-------------Cce-EEEEEcC-C--CCcEE
Q 021176 58 IGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV-------A-------------VTG-VVGFIGT-G--EPPFV 113 (316)
Q Consensus 58 ~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~-------------~~~-via~~~~-~--~~~~i 113 (316)
+.+.|+|++-|+---.....++++++.+++.|++++..+ + .+. ++.++.+ + ..++|
T Consensus 1 vn~aRdL~n~P~n~~~P~~~a~~~~~~~~~~~v~v~v~~~~~l~~~gmg~llaVg~gS~~~P~lv~l~Y~g~~~~~~~~i 80 (311)
T PF00883_consen 1 VNLARDLVNTPPNILTPETFAEYAKELAKKYGVKVEVLDEKELEKLGMGGLLAVGRGSRHPPRLVVLEYKGNGGKSKKPI 80 (311)
T ss_dssp HHHHHHHHHS-TTTSSHHHHHHHHHHHHHHCTEEEEEEEHHHHHHTT-HHHHHHHTTSSS--EEEEEEEETSTSTTSEEE
T ss_pred ChHHHhhhCCChhhcCHHHHHHHHHHHHhhcCCEEEEEeHHHHHHcCCccEeeecccCCCCCEEEEEEECCCCCCCCccE
Confidence 357889999998777778899999999999999887521 1 122 3334422 2 23556
Q ss_pred EEEeecCCCCCcccCCCcccC-----CCCCeeee-cCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 114 ALRADMDSLPLQEMVEWEYKS-----KIPGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 114 ~l~~H~Dvvp~~~~~~w~~~~-----~~~g~l~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
+|.|- +-.|++ +..+.+.+ +..++|.|+.+++++++.+.+ ++.||..++...|=
T Consensus 81 ~LVGK----------GiTFDtGG~~lKp~~~M~~Mk~DM~GAAaV~ga~~aia~lk--~~vnV~~~l~~~EN 140 (311)
T PF00883_consen 81 ALVGK----------GITFDTGGLSLKPSGGMEGMKYDMGGAAAVLGAMRAIAKLK--LPVNVVAVLPLAEN 140 (311)
T ss_dssp EEEEE----------EEEEEE-TTSSSCSTTGGGGGGGGHHHHHHHHHHHHHHHCT---SSEEEEEEEEEEE
T ss_pred EEEcc----------eEEEecCCccCCCCcchhhcccCcchHHHHHHHHHHHHHcC--CCceEEEEEEcccc
Confidence 66553 112321 11122322 223699999999999999865 77999998887776
No 85
>PTZ00412 leucyl aminopeptidase; Provisional
Probab=94.04 E-value=1.7 Score=42.56 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=78.7
Q ss_pred HHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceE-ec-------cCCceEEEEEcCCC-CcEEEEEee
Q 021176 48 AKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYK-HP-------VAVTGVVGFIGTGE-PPFVALRAD 118 (316)
Q Consensus 48 ~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~-~~-------~~~~~via~~~~~~-~~~i~l~~H 118 (316)
++.-+.+.+.+.+.|+|++-|+.--.....++.+++.+++.|++++ +. .+-+.+++.-.++. .|.++..-|
T Consensus 205 ~~~g~~ia~~vn~ARdLvn~P~N~ltP~~~Ae~a~~~~~~~g~~v~~Vl~~~~l~~~gmg~llaVgkGS~~pPrli~L~Y 284 (569)
T PTZ00412 205 IAAGNIIGHCVNEARNLGNLREDEGVPQFYAEWIKKELAPLGIKVRKVLRGEQLEGAGLNLMYNVGKGSRHEPYLVVFEY 284 (569)
T ss_pred HHHHHHHHHHHHHHHHhccCChhhcCHHHHHHHHHHHHhhcCCEEEEEEcHHHHHHCCCcceeeeeccCCCCCEEEEEEe
Confidence 3333344678889999999998655667788888888888999885 42 13344555544443 354444433
Q ss_pred cCCCCCcc------cCCCcccC----CCC-Ceeee-cCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 119 MDSLPLQE------MVEWEYKS----KIP-GKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 119 ~Dvvp~~~------~~~w~~~~----~~~-g~l~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
.--+..+ ..+-.|++ .+. +.+.. ++..+|.|+.+++++++.+.+ ++.||..++...|=
T Consensus 285 -~g~~~~~~~iaLVGKGITFDSGGisLKP~~~M~~MK~DMgGAAaVlga~~AiA~Lk--lpvnVv~iiplaEN 354 (569)
T PTZ00412 285 -IGNPRSSAATALVGKGVTFDCGGLNIKPYGSMETMHSDMMGAATVMCTLKAIAKLQ--LPVNVVAAVGLAEN 354 (569)
T ss_pred -CCCCCCCCcEEEEcCceEEcCCCCCCCCccChhhhhccchhHHHHHHHHHHHHHcC--CCeEEEEEEEhhhc
Confidence 3211110 01122331 110 11111 111499999999999998874 78999998888877
No 86
>PRK05015 aminopeptidase B; Provisional
Probab=93.05 E-value=3.9 Score=38.79 Aligned_cols=126 Identities=18% Similarity=0.140 Sum_probs=75.3
Q ss_pred HHHHHhhhhHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhc---CCceEec-------cCCceEEEEEcCCCCcEEE
Q 021176 45 LNFAKRQELVGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKM---GIKYKHP-------VAVTGVVGFIGTGEPPFVA 114 (316)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~---G~~~~~~-------~~~~~via~~~~~~~~~i~ 114 (316)
.+.+++. -+.+.+.|+|++-|+.--.....++..+++++++ ++++++. .+...+++.=.++..|+.+
T Consensus 93 ~~~l~~~---~~~~~~aRdLvn~P~n~ltP~~lA~~a~~~~~~~~~~~v~v~Vl~~~~L~~~gmggilaVgrGS~~pP~l 169 (424)
T PRK05015 93 QQELDAR---LKIIDWVRDTINAPAEELGPEQLAQRAADLICSVAGDAVSYRIIKGEDLREQGYMGIHTVGRGSERPPVL 169 (424)
T ss_pred HHHHHHH---HHHHHHHHHHhcCCcccCCHHHHHHHHHHHHHhhccCceEEEEeeHHHHHHCCCCceeeeeccCCCCCEE
Confidence 4444443 4678899999999986555566777777777776 5776642 2344555554344334444
Q ss_pred EEeecCCCCCcccC----------CCcccCCCCCeee--ecC---c---hHHHHHHHHHHHHHHhccccCCceEEEEEec
Q 021176 115 LRADMDSLPLQEMV----------EWEYKSKIPGKMH--ACG---H---DGHVTMLLGAAKILQEHREELKGTVVLVFQP 176 (316)
Q Consensus 115 l~~H~Dvvp~~~~~----------~w~~~~~~~g~l~--grG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 176 (316)
+.-+|. |.++.+ +-.|++ +|.-- +-| + .+|.|+.++++.++.+.+ ++.||..++..
T Consensus 170 v~L~Y~--~~g~~~~~v~~aLVGKGITFDS--GG~sLKps~~M~~MK~DMgGAAaV~ga~~~a~~~~--l~~nV~~il~~ 243 (424)
T PRK05015 170 LALDYN--PTGDPDAPVYACLVGKGITFDS--GGYSIKPSAGMDSMKSDMGGAATVTGALALAITRG--LNKRVKLFLCC 243 (424)
T ss_pred EEEEec--CCCCCCCCeeEEEecCceEecC--CCccCCCCcCHHHhhcchhHHHHHHHHHHHHHhcC--CCceEEEEEEe
Confidence 433433 322211 112221 11100 112 2 499999999998887764 78999999998
Q ss_pred CCC
Q 021176 177 AEE 179 (316)
Q Consensus 177 ~EE 179 (316)
.|=
T Consensus 244 aEN 246 (424)
T PRK05015 244 AEN 246 (424)
T ss_pred ccc
Confidence 887
No 87
>KOG2597 consensus Predicted aminopeptidase of the M17 family [General function prediction only]
Probab=92.84 E-value=1.9 Score=41.73 Aligned_cols=123 Identities=14% Similarity=0.102 Sum_probs=79.8
Q ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCceEecc------CCce-EEEEEcCC-CCcEEEEEeecCCCCCcc
Q 021176 55 GWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKYKHPV------AVTG-VVGFIGTG-EPPFVALRADMDSLPLQE 126 (316)
Q Consensus 55 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~~-via~~~~~-~~~~i~l~~H~Dvvp~~~ 126 (316)
.+...+.|+|..-|.---.....++++++.+...|+.++..+ ..-| +++.-.++ ..|.++...|..+-|...
T Consensus 189 ~~~~~lar~l~d~PaN~Mtp~~fae~a~~~~~~~~v~v~V~~~~~i~~~~~~~~l~V~k~s~~pP~ll~lsY~g~~~~~~ 268 (513)
T KOG2597|consen 189 AAAQNLARRLGDTPANRMTPTQFAEEAVDVLCPLGVTVEVRDEEWIEEQGMNSFLAVAKASCEPPRLLELSYKGTSGADK 268 (513)
T ss_pred HHHHHHHHHhccCChhhcCHHHHHHHHHHhhcccCceEEEechHHHhhccccceeeeccccCCCCEEEEEEEcCCCCCcc
Confidence 678888899988887555567789999999999998776421 1222 33332222 347777777777654332
Q ss_pred c-----CCCcccC----CC-CCeeee-cCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 127 M-----VEWEYKS----KI-PGKMHA-CGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 127 ~-----~~w~~~~----~~-~g~l~g-rG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
. .+..|++ .+ .+.+.+ |+.++|.|+.+++++++.+.+ ++.|+.+++.-.|-
T Consensus 269 ~i~lvGKGvtfDsGGl~iK~~~~M~~mr~dm~GAA~v~~~~~a~~~l~--~~in~~~v~plcEN 330 (513)
T KOG2597|consen 269 TILLVGKGVTFDSGGLSIKPKTGMDGMRRDMGGAAVVLGAFRAAAQLS--LPINVHAVLPLCEN 330 (513)
T ss_pred eEEEEecceEEecCccccccCCChhhhhhhccccHHHHHHHHHHHhcC--CCCceEEEEeeecc
Confidence 1 1122331 11 112222 334699999999999998875 66899999988887
No 88
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=89.99 E-value=0.53 Score=45.75 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=35.9
Q ss_pred CCCceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 269 LDSQVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 269 ~~~~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
....|+|++.++++ |+++.+++|+|++|+++++++.+++++
T Consensus 335 ~~~~t~n~g~i~~~------~~~~~~~i~~R~~~~~~~~~i~~~i~~ 375 (477)
T TIGR01893 335 LVESSLNLGVVKTK------ENKVIFTFLIRSSVESDKDYVTEKIES 375 (477)
T ss_pred eEEeeeeEEEEEEc------CCEEEEEEEeCCCCchhHHHHHHHHHH
Confidence 34578999999866 789999999999999999999998865
No 89
>COG0260 PepB Leucyl aminopeptidase [Amino acid transport and metabolism]
Probab=87.44 E-value=23 Score=34.46 Aligned_cols=121 Identities=21% Similarity=0.241 Sum_probs=72.3
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcC-CceEec-------cCCceEEEEEcCC-CCcEEEEE---eecC-
Q 021176 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMG-IKYKHP-------VAVTGVVGFIGTG-EPPFVALR---ADMD- 120 (316)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G-~~~~~~-------~~~~~via~~~~~-~~~~i~l~---~H~D- 120 (316)
+-+.+.+.|+|++.|..--.....++. ++.|.+.+ +++++. .+-+.+++.=.++ ..|.++-. ++=+
T Consensus 166 i~~~v~~aRdLvN~P~n~l~P~~la~~-a~~la~~~~v~veVl~~~~l~~~gmg~llaVg~GS~~~Prlivl~y~g~~~~ 244 (485)
T COG0260 166 IAEGVNLARDLVNTPANILTPEELAER-AELLAKLGGVKVEVLDEKDLEKLGMGALLAVGKGSARPPRLIVLEYNGKGKA 244 (485)
T ss_pred HHHHHHHHHHHhhCCcccCCHHHHHHH-HHHHhhcCCceEEEecHHHHHHcCCceeeeeccCCCCCCeEEEEEcCCCCCC
Confidence 367899999999999876666777777 66677665 777652 1334455544333 23443322 1111
Q ss_pred CCCCcc-cCCCcccCCCCCeee--ecC---c---hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 121 SLPLQE-MVEWEYKSKIPGKMH--ACG---H---DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 121 vvp~~~-~~~w~~~~~~~g~l~--grG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
-.|..- ..+-.|++ +|.-. +-| + .+|.|+.++++.++.+.+ ++.||+.+....|=
T Consensus 245 ~~~iaLVGKGitFDs--GGisiKp~~~M~~MK~DMgGAAaV~g~~~a~a~l~--l~vnv~~vl~~~EN 308 (485)
T COG0260 245 KKPIALVGKGITFDS--GGISIKPAAGMDTMKYDMGGAAAVLGAMRALAELK--LPVNVVGVLPAVEN 308 (485)
T ss_pred CceEEEEcCceeecC--CCcccCCccchhhhhcccchHHHHHHHHHHHHHcC--CCceEEEEEeeecc
Confidence 111100 01223432 11111 222 2 399999999999999875 78999999888887
No 90
>PRK02256 putative aminopeptidase 1; Provisional
Probab=73.64 E-value=6.5 Score=38.06 Aligned_cols=44 Identities=25% Similarity=0.245 Sum_probs=30.7
Q ss_pred CeeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEEecCCC-CcccHH
Q 021176 138 GKMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGGGAH 185 (316)
Q Consensus 138 g~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~G~~ 185 (316)
..+.|.+- ..++.+++.++..++ .++..++++++..|| |+.|+.
T Consensus 252 efI~s~rLDNr~~~~~~leal~~~~----~~~~~~~~~~~dqEEVGs~ga~ 298 (462)
T PRK02256 252 SLIGAYGQDDRVCAYTSLEALLELE----NPEKTAVVLLVDKEEIGSEGNT 298 (462)
T ss_pred ceeeccccccHHHHHHHHHHHHhcc----cCCCeEEEEEEcccccCCcchh
Confidence 45666554 377888888876543 356788999999999 765443
No 91
>PF07436 Curto_V3: Curtovirus V3 protein; InterPro: IPR009997 This family consists of several Curtovirus V3 proteins of around 90 residues in length. The function of this family is unknown.
Probab=72.82 E-value=13 Score=26.08 Aligned_cols=60 Identities=17% Similarity=0.287 Sum_probs=30.9
Q ss_pred CCchhhHHHHHHHHHhcCCCCcccccCCCCCCCCCchhHHHHHHHHhhhhHHHHHHHHHHhhcCCCC
Q 021176 4 AMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPEL 70 (316)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~ 70 (316)
|.+.+-||||+.++-.+.-+---|+.+-++ ....+++....-.. +++.-.+++.+-..+.
T Consensus 1 MVClPDWlFLlFifsillQsgtNfYGTfqS----gsiS~kLS~l~sr~---DeLFl~iQQvvy~R~~ 60 (87)
T PF07436_consen 1 MVCLPDWLFLLFIFSILLQSGTNFYGTFQS----GSISRKLSSLSSRF---DELFLKIQQVVYTRYP 60 (87)
T ss_pred CccchhHHHHHHHHHHHHhcCCceeeeecc----chHHHHHHHHHHHH---HHHHHHHHHhheeccC
Confidence 567888988887663332222125555544 13444544444332 4555556665544433
No 92
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=68.92 E-value=4.4 Score=22.13 Aligned_cols=18 Identities=28% Similarity=0.643 Sum_probs=14.1
Q ss_pred hhhHHHHHHHHHhcCCCC
Q 021176 7 FSKWVFVVFVLHLLNPCP 24 (316)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (316)
|||+++.++.++.++.++
T Consensus 7 mKkil~~l~a~~~LagCs 24 (25)
T PF08139_consen 7 MKKILFPLLALFMLAGCS 24 (25)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 688998888888776654
No 93
>PRK10866 outer membrane biogenesis protein BamD; Provisional
Probab=62.09 E-value=28 Score=30.53 Aligned_cols=65 Identities=12% Similarity=0.025 Sum_probs=32.1
Q ss_pred CCchhhHHHHHHHHHhcCCCCcccccCCCCCCCCCchhHHHHHHHHhhhhHHHHHHHHHHhhcCCCCC
Q 021176 4 AMSFSKWVFVVFVLHLLNPCPVRFSYGSSSSNGLSDIPKKLLNFAKRQELVGWMIGIRRKIHQNPELG 71 (316)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ips~s 71 (316)
|+.|++++.+++++++++.|+. .. ......+....-.+..+..+.-+ +++.++.++++.+.-..+
T Consensus 1 ~~~~~~~~~~~~~~~~lsgCs~-~~-~~~~~~~~~~~Y~~A~~~~~~g~-y~~Ai~~f~~l~~~yP~s 65 (243)
T PRK10866 1 MTRMKYLVAAATLSLFLAGCSG-SK-EEVPDNPPSEIYATAQQKLQDGN-WKQAITQLEALDNRYPFG 65 (243)
T ss_pred CchHHHHHHHHHHHHHHhhcCC-CC-cCCCCCCHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHhCCCC
Confidence 5577777766655566665642 11 11111111111123334444322 367888888887765444
No 94
>PF03032 Brevenin: Brevenin/esculentin/gaegurin/rugosin family; InterPro: IPR004275 In addition to the highly specific cell-mediated immune system, vertebrates possess an efficient host-defence mechanism against invading microorganisms which involves the synthesis of highly potent antimicrobial peptides with a large spectrum of activity. This entry represents a number of these defence peptides secreted from the skin of amphibians, including the opiate-like dermorphins and deltorphins, and the antimicrobial dermoseptins and temporins.; GO: 0006952 defense response, 0042742 defense response to bacterium, 0005576 extracellular region
Probab=60.44 E-value=6.8 Score=24.87 Aligned_cols=18 Identities=17% Similarity=0.316 Sum_probs=14.7
Q ss_pred hhhHHHHHHHHHhcCCCC
Q 021176 7 FSKWVFVVFVLHLLNPCP 24 (316)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (316)
|||.|+|+++|..++.|.
T Consensus 3 lKKsllLlfflG~ISlSl 20 (46)
T PF03032_consen 3 LKKSLLLLFFLGTISLSL 20 (46)
T ss_pred chHHHHHHHHHHHcccch
Confidence 688888888888887775
No 95
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=59.43 E-value=1.6e+02 Score=29.37 Aligned_cols=90 Identities=20% Similarity=0.321 Sum_probs=57.8
Q ss_pred HHHHHHHHhcCCceEeccC---------CceEEEEEc--CCC-CcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCch
Q 021176 79 QLIRSELDKMGIKYKHPVA---------VTGVVGFIG--TGE-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHD 146 (316)
Q Consensus 79 ~~l~~~l~~~G~~~~~~~~---------~~~via~~~--~~~-~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k 146 (316)
.|++..+++.|.++..... +.|+++.+. .++ ...++|. ||-+. .. |. ..
T Consensus 92 ~~~~~~~q~FGl~t~~~n~~~~P~e~y~G~NvyGilRAPRgdgtEsivl~-----vP~~~------~~---~~-----~~ 152 (617)
T KOG3566|consen 92 AWAEVSMQEFGLETHTQNYSNGPFEEYSGENVYGILRAPRGDGTESIVLV-----VPYGR------SS---GS-----NS 152 (617)
T ss_pred hHHHHHHHHhCccccccCccCCchhhcCCceEEEEEecCCCCCcceEEEE-----Eeccc------CC---Cc-----ch
Confidence 4577777777988754222 578999883 223 3667774 56321 10 11 13
Q ss_pred HHHHHHHHHHHHHHhccccCCceEEEEEecCCCCcccHHHHHHc
Q 021176 147 GHVTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEA 190 (316)
Q Consensus 147 ~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EEg~~G~~~~~~~ 190 (316)
++++.+++.++.+++.. -+..||+++|+-++- .|...++++
T Consensus 153 ~~v~l~lsla~~f~r~~-yWsKDII~v~~d~~~--~g~~AwLea 193 (617)
T KOG3566|consen 153 ASVALLLSLADYFSRWV-YWSKDIIFVFTDGPA--LGLDAWLEA 193 (617)
T ss_pred hHHHHHHHHHHHhcCCe-eecccEEEEEeCCcc--ccHHHHHHH
Confidence 78888888888888764 478999999986633 345666654
No 96
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=55.32 E-value=20 Score=34.97 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=32.1
Q ss_pred ceEEEEEEEcCCcCceeCCeEEEEEEEeccChhcHHHHHHHHhh
Q 021176 272 QVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSKESFTQLKQRIEE 315 (316)
Q Consensus 272 ~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~~~~~~v~~~l~~ 315 (316)
+|+|++.++ .--+.+++.+++|++++.+.+++.+++++
T Consensus 344 ~S~Nlg~v~------~~~~~~~i~~~~Rs~~~~~~~~i~~~i~~ 381 (485)
T PRK15026 344 TSLNVGVVT------MTDNNVEIHCLIRSLIDSGKDYVVSMLDS 381 (485)
T ss_pred eeeEEEEEE------EeCCEEEEEEEecCCCchHHHHHHHHHHH
Confidence 678888874 44567999999999999999999998865
No 97
>COG4882 Predicted aminopeptidase, Iap family [General function prediction only]
Probab=53.93 E-value=29 Score=32.31 Aligned_cols=72 Identities=24% Similarity=0.204 Sum_probs=44.9
Q ss_pred ceEEEEEcCCCCcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCC
Q 021176 99 TGVVGFIGTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAE 178 (316)
Q Consensus 99 ~~via~~~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~E 178 (316)
+|+|+.-++ ..+++++.+|.|.=-.|.. +.+ .|+++++.++..|...+. .+.++..+.|
T Consensus 179 y~~Ia~~~~-en~vv~i~AH~DHW~~G~t----------DN~------lg~~~AV~~~~~lr~~~~----~~~lv~FtAE 237 (486)
T COG4882 179 YNVIAVDGG-ENGVVLIGAHLDHWYTGFT----------DNI------LGVAQAVETAGRLRGRGL----AAGLVVFTAE 237 (486)
T ss_pred EEEEEecCC-CCCceEEeechhhhhhccc----------chh------hhHHHHHHHHHHHhhcCc----ceeEEEEecc
Confidence 344544332 3478999999998655431 233 678888888888876542 3455555677
Q ss_pred C-Cc---------ccHHHHHHcc
Q 021176 179 E-GG---------GGAHKVLEAG 191 (316)
Q Consensus 179 E-g~---------~G~~~~~~~~ 191 (316)
| |+ .|++.++++.
T Consensus 238 E~g~p~~~sfyWa~GSr~~lk~~ 260 (486)
T COG4882 238 EHGMPGMASFYWAAGSRGLLKES 260 (486)
T ss_pred ccCCCCCcceeecccchHHHhhc
Confidence 7 54 3777777653
No 98
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=52.39 E-value=2.3e+02 Score=27.89 Aligned_cols=73 Identities=22% Similarity=0.320 Sum_probs=50.9
Q ss_pred CceEEEEEc--CCC-CcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEE
Q 021176 98 VTGVVGFIG--TGE-PPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVF 174 (316)
Q Consensus 98 ~~~via~~~--~~~-~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~ 174 (316)
+.|++|... .++ ...+++..-++... +. ...++++.+++.++++++.. -+.+||+|++
T Consensus 3 G~nvy~i~rapR~d~tEaivl~~~~~~~~--------------~~----~n~~~v~l~lal~~~~~~~~-~wsKDii~l~ 63 (504)
T PF04114_consen 3 GTNVYGILRAPRGDGTEAIVLVVPWRDSD--------------GE----YNAGGVALALALARYFRRQS-YWSKDIIFLF 63 (504)
T ss_pred ceEEEEEEecCCCCCceeEEEEEecCCCC--------------cc----cchhhHHHHHHHHHHhhhch-hhhccEEEEe
Confidence 568888873 222 36788876655422 10 01388999999999999876 4689999999
Q ss_pred ecCCCCcccHHHHHHcc
Q 021176 175 QPAEEGGGGAHKVLEAG 191 (316)
Q Consensus 175 ~~~EEg~~G~~~~~~~~ 191 (316)
+.+|. .|.+.++++.
T Consensus 64 ~~~~~--~g~~awl~~Y 78 (504)
T PF04114_consen 64 TDDEL--AGMQAWLEAY 78 (504)
T ss_pred cCCcc--hHHHHHHHHH
Confidence 86543 5678888754
No 99
>PHA02291 hypothetical protein
Probab=50.95 E-value=3.9 Score=30.64 Aligned_cols=27 Identities=33% Similarity=0.271 Sum_probs=16.9
Q ss_pred CchhhHHHHHHHHHhcCCCCcccccCCCC
Q 021176 5 MSFSKWVFVVFVLHLLNPCPVRFSYGSSS 33 (316)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (316)
|+-|+|+|.+|+++++.++. +++.+++
T Consensus 1 MS~K~~iFYiL~~~VL~~si--~sY~~sS 27 (132)
T PHA02291 1 MSRKASIFYILVVIVLAFSI--SSYYISS 27 (132)
T ss_pred CCcchhhHHHHHHHHHHHHH--HHHhhhe
Confidence 56678888887776665554 4444433
No 100
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=48.75 E-value=6.3 Score=29.29 Aligned_cols=15 Identities=13% Similarity=0.312 Sum_probs=7.9
Q ss_pred CchhhHHHHHHHHHh
Q 021176 5 MSFSKWVFVVFVLHL 19 (316)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (316)
|..|++|+|.++|++
T Consensus 1 MaSK~~llL~l~LA~ 15 (95)
T PF07172_consen 1 MASKAFLLLGLLLAA 15 (95)
T ss_pred CchhHHHHHHHHHHH
Confidence 565555555555433
No 101
>PRK14864 putative biofilm stress and motility protein A; Provisional
Probab=47.80 E-value=37 Score=25.66 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=17.4
Q ss_pred cchHHHHHHHHHHHHhcCCceE
Q 021176 72 YQEFETSQLIRSELDKMGIKYK 93 (316)
Q Consensus 72 ~~e~~~~~~l~~~l~~~G~~~~ 93 (316)
+....+-+-|.++.++.|-..-
T Consensus 60 gsp~d~~~~La~KAda~GA~yY 81 (104)
T PRK14864 60 GSPDDAEREIQAKANAAGADYY 81 (104)
T ss_pred CCHHHHHHHHHHHHHHcCCCEE
Confidence 4566777889999999998754
No 102
>PRK13883 conjugal transfer protein TrbH; Provisional
Probab=43.16 E-value=1.3e+02 Score=24.40 Aligned_cols=19 Identities=16% Similarity=0.128 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHhcCCceEe
Q 021176 76 ETSQLIRSELDKMGIKYKH 94 (316)
Q Consensus 76 ~~~~~l~~~l~~~G~~~~~ 94 (316)
.-...|++.|++.|+.+..
T Consensus 64 ~Fg~aL~~aLR~~GYaV~e 82 (151)
T PRK13883 64 AFGQALVKALRDKGYALLE 82 (151)
T ss_pred HHHHHHHHHHHHcCeEEEe
Confidence 5678899999999998764
No 103
>PRK02813 putative aminopeptidase 2; Provisional
Probab=40.33 E-value=37 Score=32.55 Aligned_cols=43 Identities=26% Similarity=0.170 Sum_probs=28.3
Q ss_pred eeeecCch--HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-Ccc---cHHH
Q 021176 139 KMHACGHD--GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-GGG---GAHK 186 (316)
Q Consensus 139 ~l~grG~k--~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g~~---G~~~ 186 (316)
.+.|.+-+ .++.+++.++..+++ +..+.++++..|| |+. |+..
T Consensus 227 ~i~s~~lDnr~~~~~~l~al~~~~~-----~~~~~~~~~d~EEVGs~~~~GA~s 275 (428)
T PRK02813 227 FISSGRLDNLSSCHAGLEALLAAAS-----DATNVLAAFDHEEVGSATKQGADS 275 (428)
T ss_pred EEEEecchhHHHHHHHHHHHHhcCC-----CCeEEEEEEecCccCCCCCcccCc
Confidence 34444443 666666666655422 6789999999999 766 7763
No 104
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=39.50 E-value=1.1e+02 Score=28.76 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=40.9
Q ss_pred EEEE--cCCCCcEEEEEeecCCCCCcccCCCcccCCCCCeeeecCchHHHHHHHHHHHHHHhccccCCceEEEEEecCCC
Q 021176 102 VGFI--GTGEPPFVALRADMDSLPLQEMVEWEYKSKIPGKMHACGHDGHVTMLLGAAKILQEHREELKGTVVLVFQPAEE 179 (316)
Q Consensus 102 ia~~--~~~~~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l~grG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE 179 (316)
++++ ++...+.|+|.+|+.. |.- .++.+ +|++.+.+.++.|++.. ...+.+|+|.++=
T Consensus 119 ygE~~ipG~s~~EillsthiCH-Psm----------ANdnL------SG~~v~~~La~~L~~~~--~rytYRflf~PeT- 178 (386)
T PF09940_consen 119 YGEFVIPGESDEEILLSTHICH-PSM----------ANDNL------SGPAVLTFLAKWLKQLP--NRYTYRFLFVPET- 178 (386)
T ss_dssp EEEEEE--SSS-EEEEEEE-----S-----------TTTTH------HHHHHHHHHHHHHTTS----SSEEEEEEE-TT-
T ss_pred EEEEEecCCCCCeEEEEEeccC-ccc----------ccccc------cHHHHHHHHHHHHhcCC--cCceEEEEEcccc-
Confidence 5554 5555589999999987 531 22445 89999999999998864 4499999999853
Q ss_pred CcccHHHHHHc
Q 021176 180 GGGGAHKVLEA 190 (316)
Q Consensus 180 g~~G~~~~~~~ 190 (316)
.|+..++.+
T Consensus 179 --IGsI~yLsk 187 (386)
T PF09940_consen 179 --IGSITYLSK 187 (386)
T ss_dssp --HHHHHHHHH
T ss_pred --HHHHHHHHH
Confidence 345555543
No 105
>PTZ00371 aspartyl aminopeptidase; Provisional
Probab=33.97 E-value=72 Score=31.00 Aligned_cols=47 Identities=17% Similarity=0.071 Sum_probs=26.6
Q ss_pred eeeecCc--hHHHHHHHHHHHHHHhccccCCceEEEEE-ecCCC-CcccHH
Q 021176 139 KMHACGH--DGHVTMLLGAAKILQEHREELKGTVVLVF-QPAEE-GGGGAH 185 (316)
Q Consensus 139 ~l~grG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~-~~~EE-g~~G~~ 185 (316)
.+.|.+- ..++.+++.|+..++....+.+.++.+++ ...|| |+.|+.
T Consensus 244 ~i~s~rlDnr~~~~~~l~al~~~~~~~~~~~~~~~v~~~~d~EEVGs~ga~ 294 (465)
T PTZ00371 244 FISSPRLDNLGSSFCAFKALTEAVESLGENSSNIRMVCLFDHEEVGSSSSQ 294 (465)
T ss_pred eEEEecchhHHHHHHHHHHHHhccccccCCCCceEEEEEECCcCCCCCcch
Confidence 4445544 37777777777655431002244565555 88899 765544
No 106
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=33.24 E-value=62 Score=28.50 Aligned_cols=84 Identities=17% Similarity=0.289 Sum_probs=54.5
Q ss_pred CcEEEEEeecCCCCCcccCCCcccCCCCCee-eecCchHHHHHHHHHHHHH--HhccccCCceEEEEEecCCC--C----
Q 021176 110 PPFVALRADMDSLPLQEMVEWEYKSKIPGKM-HACGHDGHVTMLLGAAKIL--QEHREELKGTVVLVFQPAEE--G---- 180 (316)
Q Consensus 110 ~~~i~l~~H~Dvvp~~~~~~w~~~~~~~g~l-~grG~k~~~a~~l~a~~~l--~~~~~~~~~~i~~~~~~~EE--g---- 180 (316)
.|++.+.|-+=.+-+.+ .++ .-.+++|.++++-.|+|.+ ++.|..++++|.+.-.-+-- .
T Consensus 31 aptlGIiGRLGgigARP-----------~~iGlVSDaDGAi~ala~a~KL~~M~~kGd~L~GDVii~ThIcp~Apt~PH~ 99 (276)
T PF06675_consen 31 APTLGIIGRLGGIGARP-----------ERIGLVSDADGAIAALAAALKLLDMQAKGDVLPGDVIITTHICPDAPTRPHD 99 (276)
T ss_pred CCeeEEEeecccccccc-----------cceeeeecCchHHHHHHHHHHHHHHHHcCCccCCcEEEEEecCCCCCCCCCC
Confidence 49999998887775532 111 1123368888888888765 56788999999997544333 1
Q ss_pred ------c-ccHHHHHHccccccccEEEEecc
Q 021176 181 ------G-GGAHKVLEAGVLEKVNAIFGLHV 204 (316)
Q Consensus 181 ------~-~G~~~~~~~~~~~~~d~~~~~~~ 204 (316)
+ -+...+.+.......|+++.++.
T Consensus 100 PvpFM~sPv~~~~~n~~EV~p~mdAILSiDT 130 (276)
T PF06675_consen 100 PVPFMGSPVDMATMNRHEVDPEMDAILSIDT 130 (276)
T ss_pred CcccccCccCHHHHHHhhcCcccceEEEEec
Confidence 1 35556655555557888887654
No 107
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=32.89 E-value=38 Score=27.80 Aligned_cols=33 Identities=18% Similarity=0.106 Sum_probs=27.3
Q ss_pred hhcCCCCCcchHHHHHHHHHHHHhcCCceEecc
Q 021176 64 IHQNPELGYQEFETSQLIRSELDKMGIKYKHPV 96 (316)
Q Consensus 64 l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~ 96 (316)
|+-.-+..++.+++|++++..|++.|.+++..+
T Consensus 4 LIlYstr~GqT~kIA~~iA~~L~e~g~qvdi~d 36 (175)
T COG4635 4 LILYSTRDGQTRKIAEYIASHLRESGIQVDIQD 36 (175)
T ss_pred EEEEecCCCcHHHHHHHHHHHhhhcCCeeeeee
Confidence 455566678889999999999999999988643
No 108
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=31.67 E-value=29 Score=17.26 Aligned_cols=9 Identities=33% Similarity=0.674 Sum_probs=3.6
Q ss_pred HHHHHHhcC
Q 021176 13 VVFVLHLLN 21 (316)
Q Consensus 13 ~~~~~~~~~ 21 (316)
++++|++++
T Consensus 7 IlvvLLliS 15 (19)
T PF13956_consen 7 ILVVLLLIS 15 (19)
T ss_pred HHHHHHhcc
Confidence 334444433
No 109
>COG2195 PepD Di- and tripeptidases [Amino acid transport and metabolism]
Probab=30.69 E-value=72 Score=30.48 Aligned_cols=68 Identities=18% Similarity=0.159 Sum_probs=40.4
Q ss_pred cEEEEEeecCCCCC-cccCCCcccC------CCCCeee-ecCch-HHHHHHHHHHHHHHhccccCCceEEEEEecCCC-C
Q 021176 111 PFVALRADMDSLPL-QEMVEWEYKS------KIPGKMH-ACGHD-GHVTMLLGAAKILQEHREELKGTVVLVFQPAEE-G 180 (316)
Q Consensus 111 ~~i~l~~H~Dvvp~-~~~~~w~~~~------~~~g~l~-grG~k-~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE-g 180 (316)
..+.|.+|+|.||. +......+.+ .++.++- .+|++ -++++.++.+. ....++...++++|| +
T Consensus 62 ~~~~L~a~~d~V~~i~~~sh~Dt~~d~~~~~v~~~~l~~~~Gad~i~~~~~~a~L~-------~~~~P~~~~~t~~~ei~ 134 (414)
T COG2195 62 VPAVLQAHLDMVPEIGFISHHDTVPDPIGPNVNPQILKATLGADNIGLAIGLAVLS-------PEHFPLEVLLTGDEEIT 134 (414)
T ss_pred eeEEeeccccccccccccccccccccccccccCCceeeeccCcchhhhhhHHhhcC-------cccCCceeeeecceEEe
Confidence 67889999999984 3333333321 2334444 56653 34444433332 136678899999999 5
Q ss_pred cccHH
Q 021176 181 GGGAH 185 (316)
Q Consensus 181 ~~G~~ 185 (316)
..|+.
T Consensus 135 ~dGa~ 139 (414)
T COG2195 135 TDGAT 139 (414)
T ss_pred ccCcc
Confidence 55555
No 110
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins. This is a family of putative P-loop ATPases [], as they contain an ATP-binding site and display ATPase and GTPase activities.; GO: 0005524 ATP binding
Probab=26.68 E-value=1e+02 Score=27.87 Aligned_cols=31 Identities=19% Similarity=0.118 Sum_probs=23.9
Q ss_pred ceEEEEEEEcCCcCceeCCeEEEEEEEeccCh
Q 021176 272 QVVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 303 (316)
Q Consensus 272 ~t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~ 303 (316)
..++++.++=|...- +|..|.+.+|+|+.|+
T Consensus 160 ~~l~v~i~SFGfK~G-iP~dAD~VfDvRfLpN 190 (284)
T PF03668_consen 160 SRLTVTIQSFGFKYG-IPPDADLVFDVRFLPN 190 (284)
T ss_pred CceEEEEEEeccccC-CCCCCCEEEEcCcCCC
Confidence 346666666676654 8889999999999885
No 111
>COG1333 ResB ResB protein required for cytochrome c biosynthesis [Posttranslational modification, protein turnover, chaperones]
Probab=25.49 E-value=1.5e+02 Score=28.81 Aligned_cols=34 Identities=15% Similarity=0.122 Sum_probs=25.1
Q ss_pred chHHHHHHHHHHHHhcCCceEeccCCceEEEEEcC
Q 021176 73 QEFETSQLIRSELDKMGIKYKHPVAVTGVVGFIGT 107 (316)
Q Consensus 73 ~e~~~~~~l~~~l~~~G~~~~~~~~~~~via~~~~ 107 (316)
.+....+.++..|++.|+.+... +...+.|+.|-
T Consensus 110 ~~~~~~~~i~~~L~~~~~kir~e-~~~~i~AeKG~ 143 (478)
T COG1333 110 DPEAVKAKIEKLLRGKGYKIREE-GSVSIAAEKGR 143 (478)
T ss_pred chHHHHHHHHHHHhcCCeEEEec-cceeEEecccc
Confidence 44567899999999999987653 35567777654
No 112
>PRK13835 conjugal transfer protein TrbH; Provisional
Probab=23.64 E-value=3.9e+02 Score=21.49 Aligned_cols=20 Identities=15% Similarity=0.094 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhcCCceEe
Q 021176 75 FETSQLIRSELDKMGIKYKH 94 (316)
Q Consensus 75 ~~~~~~l~~~l~~~G~~~~~ 94 (316)
..-...|++.|+..|+.+..
T Consensus 68 d~Fg~aL~~aLr~~GYaVvt 87 (145)
T PRK13835 68 SPFGQALEAALKGWGYAVVT 87 (145)
T ss_pred cHHHHHHHHHHHhcCeEEee
Confidence 35567899999999998764
No 113
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.88 E-value=1.6e+02 Score=21.52 Aligned_cols=39 Identities=10% Similarity=0.124 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCce
Q 021176 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIKY 92 (316)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~ 92 (316)
+.+..++|+++++--++..+-+++|+-..+.|.+.|-+.
T Consensus 15 i~q~~~lL~~Ii~DttVPRNIRraA~~a~e~L~~e~e~p 53 (93)
T COG1698 15 INQVMQLLDEIIQDTTVPRNIRRAAEEAKEALNNEGESP 53 (93)
T ss_pred HHHHHHHHHHHHccccccHHHHHHHHHHHHHHhCCCCCc
Confidence 367888899999988998899999999999999877654
No 114
>PF09716 ETRAMP: Malarial early transcribed membrane protein (ETRAMP); InterPro: IPR006389 These sequences represent a family of proteins from the malaria parasite Plasmodium falciparum, several of which have been shown to be expressed specifically in the ring stage as well as the rodent parasite Plasmodium yoelii []. A homologue from Plasmodium chabaudi was localized to the parasitophorous vacuole membrane []. Members have an initial hydrophobic, Phe/Tyr-rich stretch long enough to span the membrane, a highly charged region rich in Lys, a second putative transmembrane region, and a second highly charged, low complexity sequence region. Some members have up to 100 residues of additional C-terminal sequence. These genes have been shown to be found in the sub-telomeric regions of both Plasmodium falciparum and P. yoelii chromosomes.
Probab=21.83 E-value=1.3e+02 Score=21.74 Aligned_cols=13 Identities=31% Similarity=0.396 Sum_probs=7.7
Q ss_pred CchhhHHHHHHHH
Q 021176 5 MSFSKWVFVVFVL 17 (316)
Q Consensus 5 ~~~~~~~~~~~~~ 17 (316)
|+.++++++|.+|
T Consensus 1 MKi~kv~~ff~~L 13 (84)
T PF09716_consen 1 MKISKVFYFFAFL 13 (84)
T ss_pred CcHHHHHHHHHHH
Confidence 6767765555433
No 115
>PRK06156 hypothetical protein; Provisional
Probab=20.57 E-value=93 Score=30.59 Aligned_cols=25 Identities=20% Similarity=0.316 Sum_probs=21.2
Q ss_pred ceEEEEEEEcCCcCceeCCeEEEEE
Q 021176 272 QVVTVAKFQGGGAFNVIPDSVLIGG 296 (316)
Q Consensus 272 ~t~~i~~i~gg~~~nviP~~a~~~~ 296 (316)
.+.++..++||...|+||+.|.+.+
T Consensus 239 ~~~~l~~~~gG~~~n~ip~~a~~~~ 263 (520)
T PRK06156 239 KGAEIVAMTGGAFANQIPQTAVATL 263 (520)
T ss_pred CceeEEEEEcCCcCCCCCCccEEEE
Confidence 3567888899999999999998773
No 116
>PRK04330 hypothetical protein; Provisional
Probab=20.55 E-value=2.4e+02 Score=20.58 Aligned_cols=38 Identities=8% Similarity=-0.034 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHhcCCc
Q 021176 54 VGWMIGIRRKIHQNPELGYQEFETSQLIRSELDKMGIK 91 (316)
Q Consensus 54 ~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~ 91 (316)
+++.++.|.++++-.++..+-+++++-..+.|.+-+.+
T Consensus 11 ik~~~~~L~~I~~D~sVPRNIRraa~ea~~~L~~e~~~ 48 (88)
T PRK04330 11 IKQAIQMLEEIINDTSVPRNIRRAATEAKEILLNEEES 48 (88)
T ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHhCcCcc
Confidence 46788889999999999999999999999999876654
No 117
>PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional
Probab=20.34 E-value=1.3e+02 Score=27.08 Aligned_cols=30 Identities=20% Similarity=0.059 Sum_probs=23.8
Q ss_pred eEEEEEEEcCCcCceeCCeEEEEEEEeccCh
Q 021176 273 VVTVAKFQGGGAFNVIPDSVLIGGTFRAFSK 303 (316)
Q Consensus 273 t~~i~~i~gg~~~nviP~~a~~~~d~R~~p~ 303 (316)
.+++..++=|.+.. +|..|.+.+|+|+.|+
T Consensus 164 ~~~i~~~SFg~k~g-~p~dad~vfDvR~lpN 193 (288)
T PRK05416 164 GLTVTVESFGFKYG-IPLDADLVFDVRFLPN 193 (288)
T ss_pred ceEEEEEeecccCC-CCCCCCEEEEeCcCCC
Confidence 46677767677666 6888999999999885
Done!