Query 021183
Match_columns 316
No_of_seqs 171 out of 438
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 13:58:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021183.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021183hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1we1_A Heme oxygenase 1; oxido 100.0 1.1E-42 3.9E-47 319.7 18.0 201 86-314 2-207 (240)
2 1j02_A Heme oxygenase 1; alpha 100.0 1.1E-42 3.8E-47 325.1 17.4 202 85-314 9-218 (267)
3 1n45_A Heme oxygenase 1, HO-1; 100.0 1.4E-42 4.7E-47 317.4 16.3 201 86-314 10-218 (233)
4 1wzd_A Heme oxygenase; electro 100.0 7.8E-43 2.7E-47 314.3 13.6 201 86-314 5-212 (215)
5 2q32_A Heme oxygenase 2, HO-2; 100.0 2.6E-42 8.8E-47 322.0 17.2 204 84-315 28-239 (264)
6 1wov_A Heme oxygenase 2; HOMO 100.0 2.3E-42 7.8E-47 319.6 14.0 200 87-314 2-210 (250)
7 1sk7_A Hypothetical protein PA 99.9 8.5E-27 2.9E-31 208.0 15.8 155 143-314 39-197 (198)
8 1j77_A HEMO, heme oxygenase; p 99.9 4.7E-26 1.6E-30 205.2 15.7 154 142-315 35-193 (209)
9 3dde_A TENA/THI-4 protein, dom 99.6 1.4E-15 4.7E-20 137.4 12.8 166 143-314 35-218 (239)
10 1rtw_A Transcriptional activat 92.1 1.8 6E-05 38.0 11.8 155 142-307 29-199 (220)
11 3ibx_A TENA, HP1287, putative 91.2 4.2 0.00014 35.6 13.3 144 143-298 35-203 (221)
12 4fn6_A Thiaminase-2, thiaminas 91.2 0.83 2.9E-05 40.5 8.7 145 143-298 31-200 (229)
13 2qcx_A Transcriptional activat 90.3 1.2 4.1E-05 40.6 9.1 160 142-307 57-233 (263)
14 3oql_A TENA homolog; transcrip 89.9 0.74 2.5E-05 42.6 7.4 162 143-312 49-243 (262)
15 2f2g_A SEED maturation protein 89.6 0.9 3.1E-05 39.7 7.4 161 140-305 31-209 (221)
16 3no6_A Transcriptional activat 88.3 2.7 9.3E-05 38.0 9.8 150 142-298 49-219 (248)
17 3bjd_A Putative 3-oxoacyl-(acy 85.1 18 0.0006 34.1 13.9 158 143-308 136-317 (332)
18 1rcw_A CT610, CADD; iron, DI-i 82.3 7.4 0.00025 33.6 9.4 161 143-312 34-217 (231)
19 3rm5_A Hydroxymethylpyrimidine 79.0 6.6 0.00023 39.3 8.9 146 141-297 360-530 (550)
20 2a2m_A Hypothetical protein BT 78.8 29 0.001 31.3 12.5 127 143-288 78-226 (258)
21 1z72_A Transcriptional regulat 76.0 3.8 0.00013 35.8 5.5 151 143-302 44-211 (225)
22 1wwm_A Hypothetical protein TT 64.4 39 0.0013 28.7 9.3 135 137-291 22-170 (190)
23 3mvu_A TENA family transcripti 64.3 30 0.001 30.3 8.7 145 143-297 37-207 (226)
24 1udd_A Transcriptional regulat 61.2 20 0.00067 31.3 6.9 135 143-283 33-185 (226)
25 2gm8_A TENA homolog/THI-4 thia 60.8 82 0.0028 27.2 11.1 137 142-283 38-192 (221)
26 3b5o_A CADD-like protein of un 52.8 1.4E+02 0.0048 27.4 11.9 124 185-313 95-225 (244)
27 1u7k_A GAG polyprotein; capsid 37.2 31 0.001 29.1 3.9 28 273-303 52-79 (131)
28 2qzc_A Transcriptional activat 29.0 1.3E+02 0.0046 25.5 6.9 135 141-283 33-182 (214)
29 3b09_A Peptidyl-prolyl CIS-tra 25.5 1.7E+02 0.0058 22.4 6.1 31 268-298 53-83 (88)
30 3efd_K KCSA; helix bundle, C-t 24.1 99 0.0034 19.5 3.6 24 146-169 6-29 (30)
No 1
>1we1_A Heme oxygenase 1; oxidoreductase; HET: HEM; 2.50A {Synechocystis SP} SCOP: a.132.1.1
Probab=100.00 E-value=1.1e-42 Score=319.65 Aligned_cols=201 Identities=14% Similarity=0.248 Sum_probs=181.0
Q ss_pred ccchHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021183 86 SKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIER 165 (316)
Q Consensus 86 ~~g~~eemr~vam~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~aLE~ 165 (316)
+.+|.+.||...+++|+.-.+. + --+..-+|.+|++.|+++|.++|+||.+||+
T Consensus 2 ~~~l~~~Lr~~T~~~H~~~e~~----------~----------------~~~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~ 55 (240)
T 1we1_A 2 SVNLASQLREGTKKSHSMAENV----------G----------------FVKCFLKGVVEKNSYRKLVGNLYFVYSAMEE 55 (240)
T ss_dssp CCCHHHHHHHHTHHHHHHHHTS----------H----------------HHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHCc----------H----------------HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999999999864310 0 0011346799999999999999999999999
Q ss_pred HHHhcC-CccccccccccccchHHHHHHHHHhHhCCCC-CcCCCccHHHHHHHHHHHhccCccchhhHHHHHHhhhcchh
Q 021183 166 IVDDSN-DVAYAYFRKTGLERSEGISRDLEWFSEQGII-IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGG 243 (316)
Q Consensus 166 al~~~~-d~~~a~f~~~eL~Rs~aLe~DL~~l~G~~~~-~~~pspa~~~Yv~~L~ela~~~P~lLLAH~YvrYLGdLSGG 243 (316)
+++++. ++.++.|..++|.|+++|++||++|+|++|. .+.|+++++.||+||+++++++|.+||||+||+|+||+|||
T Consensus 56 ~~~~~~~~p~l~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llg~~Yv~y~g~lsGG 135 (240)
T 1we1_A 56 EMAKFKDHPILSHIYFPELNRKQSLEQDLQFYYGSNWRQEVKISAAGQAYVDRVRQVAATAPELLVAHSYTRYLGDLSGG 135 (240)
T ss_dssp HHHHTTTSTTGGGGCCTTSCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHhcccCchhHhhhhHhhhhHHHHHHHHHHhcCCCccccCCCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHH
Confidence 999985 5777888889999999999999999999996 77889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc-cCCCcccceeecC--ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 244 QVIERQVSEKI-LDGRKLEVYRWEG--DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLII 314 (316)
Q Consensus 244 QiI~r~v~r~l-l~g~GL~FY~F~g--d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~ 314 (316)
|+|++++++++ ++++|++||.|+| |.+.+|+.||+.||++. ||++++++||+||+.+|++|++||++|.
T Consensus 136 q~i~~~~~~~l~L~~~g~~fy~f~~~~d~~~~k~~fr~~Ld~l~--l~~~e~~~ii~eA~~aF~~n~~if~eL~ 207 (240)
T 1we1_A 136 QILKKIAQNAMNLHDGGTAFYEFADIDDEKAFKNTYRQAMNDLP--IDQATAERIVDEANDAFAMNMKMFNELE 207 (240)
T ss_dssp HHHHHHHHHHHTCSSSSCGGGCCTTCSSHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHhcCcCcccchhcccCCcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 8889999999998 68899999999999997 9999999999999999999999999874
No 2
>1j02_A Heme oxygenase 1; alpha helix, O2-analog bound form, oxidoreductase; HET: HEM; 1.70A {Rattus norvegicus} SCOP: a.132.1.1 PDB: 1irm_C 1dve_A* 1ix3_A* 1ivj_A* 1ix4_A* 1j2c_A* 1ubb_A* 1ulx_A* 1vgi_A* 2dy5_A* 2e7e_A* 2zvu_A* 1dvg_A* 3i9t_A* 3i9u_A*
Probab=100.00 E-value=1.1e-42 Score=325.12 Aligned_cols=202 Identities=17% Similarity=0.297 Sum_probs=180.4
Q ss_pred CccchHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 021183 85 ESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIE 164 (316)
Q Consensus 85 e~~g~~eemr~vam~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~aLE 164 (316)
-.++|.++||...+++|++-.+. .-...+-+|.+++++|++||.++|+||.+||
T Consensus 9 ~~~~l~~~Lr~~T~~~H~~~E~~--------------------------~~~~~l~~g~vs~e~Y~~~L~~~y~vy~aLE 62 (267)
T 1j02_A 9 MSQDLSEALKEATKEVHIRAENS--------------------------EFMRNFQKGQVSREGFKLVMASLYHIYTALE 62 (267)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTS--------------------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999999999875321 0001234679999999999999999999999
Q ss_pred HHHHhcC-Cccccccccc-cccchHHHHHHHHHhHhCCCC-CcCCCccHHHHHHHHHHHhccCccchhhHHHHHHhhhcc
Q 021183 165 RIVDDSN-DVAYAYFRKT-GLERSEGISRDLEWFSEQGII-IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVA 241 (316)
Q Consensus 165 ~al~~~~-d~~~a~f~~~-eL~Rs~aLe~DL~~l~G~~~~-~~~pspa~~~Yv~~L~ela~~~P~lLLAH~YvrYLGdLS 241 (316)
++++++. ++.+..++.+ +|.|+++|++||++|+|.+|. .+.|++++..||+||+++++++|.+||||+||+|+||+|
T Consensus 63 ~~l~~~~~~p~l~~~~~peel~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~ls 142 (267)
T 1j02_A 63 EEIERNKQNPVYAPLYFPEELHRRAALEQDMAFWYGPHWQEAIPYTPATQHYVKRLHEVGGTHPELLVAHAYTRYLGDLS 142 (267)
T ss_dssp HHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTT
T ss_pred HHHHHcccCcHHHHhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 9999986 5666777788 899999999999999999997 778889999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhc-cC--CCcccceeecC--ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 242 GGQVIERQVSEKI-LD--GRKLEVYRWEG--DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLII 314 (316)
Q Consensus 242 GGQiI~r~v~r~l-l~--g~GL~FY~F~g--d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~ 314 (316)
|||||++++++.+ ++ ++|++||.|+| +.+.+|+.||+.||+++ ||++++++||+||+.+|++|++||++|.
T Consensus 143 GGqii~k~l~k~lgL~~~~~gl~Fy~f~g~~d~~~~k~~fr~~Ld~l~--ld~ee~~~iI~eA~~aF~ln~~if~eL~ 218 (267)
T 1j02_A 143 GGQVLKKIAQKAMALPSSGEGLAFFTFPSIDNPTKFKQLYRARMNTLE--MTPEVKHRVTEEAKTAFLLNIELFEELQ 218 (267)
T ss_dssp HHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCcceeeccCCcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 65 68999999998 78889999999999997 9999999999999999999999999985
No 3
>1n45_A Heme oxygenase 1, HO-1; alpha helices, heme-binding site, oxidoreductase; HET: HEM; 1.50A {Homo sapiens} SCOP: a.132.1.1 PDB: 1n3u_A* 1ozr_A* 1ozw_A* 1s13_A* 1s8c_A* 1t5p_A* 1twn_A* 1twr_A* 3czy_A* 3hok_A* 3k4f_A* 3tgm_A* 1xjz_A* 1xk3_A* 1xk2_A* 1ozl_A* 1oyk_A* 1oze_A* 1oyl_A* 1xk0_A* ...
Probab=100.00 E-value=1.4e-42 Score=317.36 Aligned_cols=201 Identities=16% Similarity=0.286 Sum_probs=179.6
Q ss_pred ccchHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021183 86 SKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIER 165 (316)
Q Consensus 86 ~~g~~eemr~vam~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~aLE~ 165 (316)
.++|.++||...+++|++-.+. .-.....+|.+++++|++||.++|+||.+||+
T Consensus 10 ~~~l~~~Lr~~T~~~H~~~e~~--------------------------~~~~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~ 63 (233)
T 1n45_A 10 PQDLSEALKEATKEVHTQAENA--------------------------EFMRNFQKGQVTRDGFKLVMASLYHIYVALEE 63 (233)
T ss_dssp CCSHHHHHHHHTHHHHHHHHHS--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999864310 00012467899999999999999999999999
Q ss_pred HHHhcC-Cccccccccc-cccchHHHHHHHHHhHhCCCC-CcCCCccHHHHHHHHHHHhccCccchhhHHHHHHhhhcch
Q 021183 166 IVDDSN-DVAYAYFRKT-GLERSEGISRDLEWFSEQGII-IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAG 242 (316)
Q Consensus 166 al~~~~-d~~~a~f~~~-eL~Rs~aLe~DL~~l~G~~~~-~~~pspa~~~Yv~~L~ela~~~P~lLLAH~YvrYLGdLSG 242 (316)
+++++. ++.++.++.+ +|.|+++|++||++|.|.+|. .+.|+++++.||+||++++.++|.+|+||+||+|+|+++|
T Consensus 64 ~~~~~~~~p~~~~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~~~~a~~~yv~~i~~i~~~~P~~l~ah~Yv~YeG~~~G 143 (233)
T 1n45_A 64 EIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSG 143 (233)
T ss_dssp HHHHHTTSTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGTSCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHH
T ss_pred HHHhcccCchhhhhcCHhhcccHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 999986 5666667777 899999999999999998896 7788999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhc-cC--CCcccceeecC--ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 243 GQVIERQVSEKI-LD--GRKLEVYRWEG--DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLII 314 (316)
Q Consensus 243 GQiI~r~v~r~l-l~--g~GL~FY~F~g--d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~ 314 (316)
||+|++++++++ ++ ++|++||.|+| +.+.+|+.||+.||+++ ||++++++||+||+.+|++|++||++|.
T Consensus 144 Gq~i~~~~~~~l~L~~~~~g~~f~~f~~~~~~~~~k~~fr~~Ld~~~--l~~~e~~~ii~eA~~aF~~n~~i~~el~ 218 (233)
T 1n45_A 144 GQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLE--MTPAVRQRVIEEAKTAFLLNIQLFEELQ 218 (233)
T ss_dssp HHHHHHHHHHHHCCCSCSCSCGGGCCTTCSCHHHHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCcceeeccCCcCCHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 65 68999999997 67888888999999997 9999999999999999999999999985
No 4
>1wzd_A Heme oxygenase; electron-transfer, artificial metalloprotein; HET: YOK; 1.35A {Corynebacterium diphtheriae} SCOP: a.132.1.1 PDB: 1iw1_A* 1v8x_A* 1iw0_A* 1wzf_A* 1wzg_A* 2z68_A* 3i8r_A* 3moo_A* 1wnw_A* 1wnx_A* 1wnv_A*
Probab=100.00 E-value=7.8e-43 Score=314.32 Aligned_cols=201 Identities=23% Similarity=0.358 Sum_probs=180.9
Q ss_pred ccchHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021183 86 SKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIER 165 (316)
Q Consensus 86 ~~g~~eemr~vam~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~aLE~ 165 (316)
+++|.++||...+++|++-.+. .--....+|.++++.|+++|.++|+||.+||+
T Consensus 5 ~~~l~~~Lr~~T~~~H~~~e~~--------------------------~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~lE~ 58 (215)
T 1wzd_A 5 TAGLAVELKQSTAQAHEKAEHS--------------------------TFMSDLLKGRLGVAEFTRLQEQAWLFYTALEQ 58 (215)
T ss_dssp --CHHHHHHHHTHHHHHHHHTC--------------------------HHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHcc--------------------------HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999876521 00012456899999999999999999999999
Q ss_pred HHHhcC-CccccccccccccchHHHHHHHHHhHhCC-CC-CcCCCccHHHHHHHHHHHhccC-ccchhhHHHHHHhhhcc
Q 021183 166 IVDDSN-DVAYAYFRKTGLERSEGISRDLEWFSEQG-II-IPEPSTPGVSYAKYLEELAEKS-APLFLSHFYNIYFSHVA 241 (316)
Q Consensus 166 al~~~~-d~~~a~f~~~eL~Rs~aLe~DL~~l~G~~-~~-~~~pspa~~~Yv~~L~ela~~~-P~lLLAH~YvrYLGdLS 241 (316)
+++++. ++.+..|..++|.|+++|++||++|.|++ |. .+.|+++++.|++||++++.++ |.+||||+||+|+|+++
T Consensus 59 ~~~~~~~~p~~~~~~~~el~R~~~l~~DL~~l~~~~~w~~~~~~~~a~~~yv~~i~~~~~~~~p~~~lg~~Yv~YeG~~~ 138 (215)
T 1wzd_A 59 AVDAVRASGFAESLLDPALNRAEVLARDLDKLNGSSEWRSRITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGDLS 138 (215)
T ss_dssp HHHHHHHHTSSTTTSCGGGCCHHHHHHHHHHHHSSSTHHHHCCCCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcccCchhhhhccchhccHHHHHHHHHHHcCCcchhhcCCCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHh
Confidence 999886 46677788899999999999999999988 86 7788999999999999999989 99999999999999999
Q ss_pred hhHHHHHHHHHhc-cCCCcccceeecC--ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 242 GGQVIERQVSEKI-LDGRKLEVYRWEG--DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLII 314 (316)
Q Consensus 242 GGQiI~r~v~r~l-l~g~GL~FY~F~g--d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~ 314 (316)
|||+|++++++++ ++++|++||.|+| +.+.+|+.||+.||++. ||++++++||+||+.+|++|++||++|-
T Consensus 139 GGq~i~~~~~~~l~l~~~g~~f~~~~~~~~~~~~~~~fr~~Ld~~~--~~~~~~~~ii~eA~~aF~~~~~i~~el~ 212 (215)
T 1wzd_A 139 GGQVIARMMQRHYGVDPEALGFYHFEGIAKLKVYKDEYREKLNNLE--LSDEQREHLLKEATDAFVFNHQVFADLG 212 (215)
T ss_dssp HHHHHHHHHHHHHCCCGGGCGGGCCTTCSCHHHHHHHHHHHHHTCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhcCcCcccceeeecCCcCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 8899999999998 78999999999999997 9999999999999999999999999985
No 5
>2q32_A Heme oxygenase 2, HO-2; structural genomics medical relevance, structural genomics community request, protein structure in PSI; HET: OXN; 2.40A {Homo sapiens} PDB: 2qpp_A* 2rgz_A*
Probab=100.00 E-value=2.6e-42 Score=322.02 Aligned_cols=204 Identities=17% Similarity=0.288 Sum_probs=181.3
Q ss_pred CCccchHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 021183 84 GESKGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTI 163 (316)
Q Consensus 84 ge~~g~~eemr~vam~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~aL 163 (316)
...++|.++||...+++|++--+. .-....-+|.+++++|+++|.++|+||.+|
T Consensus 28 ~~~~~~~~~Lr~~T~~~H~~~e~~--------------------------~~~~~ll~g~~~~e~Y~~~L~~~y~vy~~L 81 (264)
T 2q32_A 28 MRMADLSELLKEGTKEAHDRAENT--------------------------QFVKDFLKGNIKKELFKLATTALYFTYSAL 81 (264)
T ss_dssp -CTTSHHHHHHHHSHHHHHHHHTC--------------------------HHHHHHHTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHcc--------------------------HHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 345689999999999999875310 000124578999999999999999999999
Q ss_pred HHHHHhcC-Cccccccccc-cccchHHHHHHHHHhHhCCCC-CcCCCccHHHHHHHHHHHhccCccchhhHHHHHHhhhc
Q 021183 164 ERIVDDSN-DVAYAYFRKT-GLERSEGISRDLEWFSEQGII-IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHV 240 (316)
Q Consensus 164 E~al~~~~-d~~~a~f~~~-eL~Rs~aLe~DL~~l~G~~~~-~~~pspa~~~Yv~~L~ela~~~P~lLLAH~YvrYLGdL 240 (316)
|++++++. ++.++.+..+ +|.|+++|++||++|+|.+|. .+.|+++++.|++||+++++++|.+||||+||+|+|++
T Consensus 82 E~~l~~~~~~p~l~~~~~~~el~R~~~L~~DL~~l~G~~w~~~~~p~~a~~~yv~~i~~ia~~~P~~llgh~Yv~y~g~l 161 (264)
T 2q32_A 82 EEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDL 161 (264)
T ss_dssp HHHHHHTTTCTTTGGGCCHHHHCCHHHHHHHHHHHHCTTGGGGCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHcccChHhHhhcCHhhhhhHHHHHHHHHHhcCCCccccCCCChHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999986 5666677777 799999999999999999996 77889999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHhc-cC--CCcccceeecC--ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 021183 241 AGGQVIERQVSEKI-LD--GRKLEVYRWEG--DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLIIL 315 (316)
Q Consensus 241 SGGQiI~r~v~r~l-l~--g~GL~FY~F~g--d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~~ 315 (316)
||||+|++++++.+ ++ ++|++||.|+| +.+.+|+.||+.||++. ||++++++||+||+.+|++|++||++|..
T Consensus 162 sGGqii~k~l~k~lgL~~~~~g~~Fy~f~g~~d~~~~k~~fr~~Ld~l~--ld~ee~~~iI~eA~~aF~ln~~if~eL~~ 239 (264)
T 2q32_A 162 SGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALD--LNMKTKERIVEEANKAFEYNMQIFNELDQ 239 (264)
T ss_dssp HHHHHHHHHHHHHHTCCTTCTTCGGGCCTTCSCHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHhcCCCCCCccceeeccCCCCCHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 65 68999999998 68889999999999997 99999999999999999999999999853
No 6
>1wov_A Heme oxygenase 2; HOMO dimer, oxidoreductase; HET: HEM; 1.75A {Synechocystis SP} SCOP: a.132.1.1 PDB: 1wow_A* 1wox_A*
Probab=100.00 E-value=2.3e-42 Score=319.55 Aligned_cols=200 Identities=17% Similarity=0.307 Sum_probs=179.5
Q ss_pred cchHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCCCcchhhhhhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 021183 87 KGITEEMRFVAMRLRNLKGKKYPSSPHNSNSDCEDSSNDDVEHEQEVKQDNDGETWKPSMDAFVKYLVDSQLVFNTIERI 166 (316)
Q Consensus 87 ~g~~eemr~vam~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~w~~s~e~Y~~lL~~ly~VY~aLE~a 166 (316)
.+|.+.||....++|+.-.+. .--....+|.+|++.|+++|.++|+||.+||++
T Consensus 2 ~~l~~~Lr~~T~~~H~~~e~~--------------------------~~v~~l~~g~~~~~~Y~~~L~~~y~vy~~LE~~ 55 (250)
T 1wov_A 2 TNLAQKLRYGTQQSHTLAENT--------------------------AYMKCFLKGIVEREPFRQLLANLYYLYSALEAA 55 (250)
T ss_dssp CCHHHHHHHHTHHHHHHHHTS--------------------------HHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHch--------------------------HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 368899999999999764310 000124567999999999999999999999999
Q ss_pred HHhcC-CccccccccccccchHHHHHHHHHhHhCCCC-CcCCCccHHHHHHHHHHHhccCccchhhHHHHHHhhhcchhH
Q 021183 167 VDDSN-DVAYAYFRKTGLERSEGISRDLEWFSEQGII-IPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQ 244 (316)
Q Consensus 167 l~~~~-d~~~a~f~~~eL~Rs~aLe~DL~~l~G~~~~-~~~pspa~~~Yv~~L~ela~~~P~lLLAH~YvrYLGdLSGGQ 244 (316)
++++. ++.++.|..++|.|+++|++||++|+|++|. .+.|++++..||+||+++++++|.+||||+||+|+||+||||
T Consensus 56 ~~~~~~~p~l~~~~~~el~R~~~L~~DL~~l~g~~~~~~~~p~~a~~~yv~~i~~i~~~~P~~llgh~Yv~y~g~lsGGq 135 (250)
T 1wov_A 56 LRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSGGQ 135 (250)
T ss_dssp HHHTTTSHHHHHHCCGGGCCHHHHHHHHHHHHCTTHHHHCCCCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTHHH
T ss_pred HHHhccChhhhhhccHhhhhHHHHHHHHHHHcCCCccccCCCChHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhHHH
Confidence 99986 5677788889999999999999999999996 778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc-cC-CCcccceeecC-----ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 245 VIERQVSEKI-LD-GRKLEVYRWEG-----DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLII 314 (316)
Q Consensus 245 iI~r~v~r~l-l~-g~GL~FY~F~g-----d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~ 314 (316)
+|++++++.+ ++ ++|++||.|+| |.+.+|+.||+.||++. ||++++++||+||+.+|++|++||++|.
T Consensus 136 ~i~~~l~k~l~L~~~~g~~fy~f~~~~~~~d~~~~k~~fr~~Ld~l~--l~~~e~~~ii~eA~~aF~ln~~if~eL~ 210 (250)
T 1wov_A 136 SLKNIIRSALQLPEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLP--LDEATINRIVEEANYAFSLNREVMHDLE 210 (250)
T ss_dssp HHHHHHHHHTTCCTTSSCGGGCCTTCCSHHHHHHHHHHHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHhcCCCCcccceeeccCCccccccHHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988 76 89999999998 57789999999999997 9999999999999999999999999874
No 7
>1sk7_A Hypothetical protein PA-HO; heme oxygenase, heme degradation, regioselectivity, oxidored; HET: HEM; 1.60A {Pseudomonas aeruginosa} SCOP: a.132.1.2
Probab=99.94 E-value=8.5e-27 Score=208.04 Aligned_cols=155 Identities=14% Similarity=0.168 Sum_probs=130.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccccccccccccchHHHHHHHHHhHhCCCCCcCCCccHHHHHHHHHHHh
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDSN-DVAYAYFRKTGLERSEGISRDLEWFSEQGIIIPEPSTPGVSYAKYLEELA 221 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~~-d~~~a~f~~~eL~Rs~aLe~DL~~l~G~~~~~~~pspa~~~Yv~~L~ela 221 (316)
..+++.|+++|.++|+||.+||.+++.+. ++.+. ..+++.|+++|++||++| |.+|....+.|++ .
T Consensus 39 ~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~--~~~e~~R~~~L~~DL~~l-g~~~~~~i~~p~~----------~ 105 (198)
T 1sk7_A 39 FASRDNFARFVAAQYLFQHDLEPLYRNEALARLFP--GLASRARDDAARADLADL-GHPVPEGDQSVRE----------A 105 (198)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHST--TGGGGCCHHHHHHHHHHH-TCCCCCCCCTTTT----------S
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcccccccC--chHhhhhHHHHHHHHHHh-CCCCcccCCCccc----------c
Confidence 67999999999999999999999998864 33333 356999999999999999 6667643344432 1
Q ss_pred ccCccchhhHHHHHHhhhcchhHHHHHHHHHhc-cC-CCcccceeecC-ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 021183 222 EKSAPLFLSHFYNIYFSHVAGGQVIERQVSEKI-LD-GRKLEVYRWEG-DPEEMLKDVREKLNMLGEHWTRDEKNKSLKE 298 (316)
Q Consensus 222 ~~~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~l-l~-g~GL~FY~F~g-d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeE 298 (316)
.-+|..+++|.||+ .|+++|||+|+++++ ++ ++ +.|++||.|+| .....|+.||+.||+++ +|++++++||+|
T Consensus 106 ~~~~~~~lG~~YV~-eGs~lGGq~l~~~~~-~l~l~~~~g~~f~~~~~~~~~~~wk~f~~~Ld~l~--~d~~~~~~ii~~ 181 (198)
T 1sk7_A 106 DLSLAEALGWLFVS-EGSKLGAAFLFKKAA-ALELDENFGARHLAEPEGGRAQGWKSFVAILDGIE--LNEEEERLAAKG 181 (198)
T ss_dssp CCCHHHHHHHHHHH-HHTTTTHHHHHHHHG-GGTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHCC--CCHHHHHHHHHH
T ss_pred cCChHHHHHHHHHH-HHHHHHHHHHHHHHH-HcCCCcccchHhhCCCCccchHHHHHHHHHHhCCC--CCHHHHHHHHHH
Confidence 22556789999999 599999999999999 77 65 68999999998 45555678999999998 999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 021183 299 AAKSFKFLGQIVRLII 314 (316)
Q Consensus 299 A~~AF~lN~~I~r~I~ 314 (316)
|+.+|.+|.+||+.|.
T Consensus 182 A~~aF~l~~~~l~~~~ 197 (198)
T 1sk7_A 182 ASDAFNRFGDLLERTF 197 (198)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 8
>1j77_A HEMO, heme oxygenase; proximal histidine, distal helix, oxidoreductase; HET: HEM; 1.50A {Neisseria meningitidis} SCOP: a.132.1.2 PDB: 1p3t_A* 1p3u_A* 1p3v_A*
Probab=99.94 E-value=4.7e-26 Score=205.16 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=129.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcC-CccccccccccccchHHHHHHHHHhHhCCCCCc-CCCccHHHHHHHHHH
Q 021183 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSN-DVAYAYFRKTGLERSEGISRDLEWFSEQGIIIP-EPSTPGVSYAKYLEE 219 (316)
Q Consensus 142 w~~s~e~Y~~lL~~ly~VY~aLE~al~~~~-d~~~a~f~~~eL~Rs~aLe~DL~~l~G~~~~~~-~pspa~~~Yv~~L~e 219 (316)
-..+++.|++||.++|+||.+||.+++.+. ++.+.. .+++.|+++|++||++| |.+...+ .|.+
T Consensus 35 g~~~~~~Y~~~L~~~y~~y~~lE~~l~~~~~~~~~~~--~~e~~R~~~L~~DL~~l-G~~~~~v~~~~~----------- 100 (209)
T 1j77_A 35 PFVSKENYIKFLKLQSVFHKAVDHIYKDAELNKAIPE--LEYMARYDAVTQDLKDL-GEEPYKFDKELP----------- 100 (209)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHSTT--GGGGCCHHHHHHHHHHT-TCCCCCCSSCCC-----------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcccCcccCC--hHhhhhHHHHHHHHHHh-CCChhhccCCCC-----------
Confidence 367999999999999999999999998864 333333 57999999999999999 6553322 2221
Q ss_pred HhccCccchhhHHHHHHhhhcchhHHHHHHHHHhc-cC-CCcccceeecC-ChHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q 021183 220 LAEKSAPLFLSHFYNIYFSHVAGGQVIERQVSEKI-LD-GRKLEVYRWEG-DPEEMLKDVREKLNMLGEHWTRDEKNKSL 296 (316)
Q Consensus 220 la~~~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~l-l~-g~GL~FY~F~g-d~~~lK~~yR~~Lnal~e~Ld~eEk~~iI 296 (316)
.-+|..+++|.||+ .|+++|||+|+++++ ++ ++ ++|++||.|+| .....|+.||+.||+++ +|++++++||
T Consensus 101 --~~~~~~~~G~~YV~-eGs~lGGq~l~k~~~-~l~l~~~~g~~f~~~~~~~~~~~w~~fr~~Ld~l~--~d~~~~~~ii 174 (209)
T 1j77_A 101 --YEAGNKAIGWLYCA-EGSNLGAAFLFKHAQ-KLDYNGEHGARHLAPHPDGRGKHWRAFVEHLNALN--LTPEAEAEAI 174 (209)
T ss_dssp --CCCHHHHHHHHHHH-HHHHHTTHHHHHHHH-TTTCBTTBBCGGGSCCTTCHHHHHHHHHHHHHHTC--CCHHHHHHHH
T ss_pred --CCChHHHHHHHHHH-HHHHHHHHHHHHHHH-HcCCCcccchhhhCCCCcccHHHHHHHHHHHHcCC--CCHHHHHHHH
Confidence 12455689999999 599999999999999 77 65 68999999998 56777999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 021183 297 KEAAKSFKFLGQIVRLIIL 315 (316)
Q Consensus 297 eEA~~AF~lN~~I~r~I~~ 315 (316)
+||+.+|.+|++||+++..
T Consensus 175 ~~A~~aF~l~~~~f~~l~~ 193 (209)
T 1j77_A 175 QGAREAFAFYKVVLRETFG 193 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999863
No 9
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=99.64 E-value=1.4e-15 Score=137.43 Aligned_cols=166 Identities=11% Similarity=0.081 Sum_probs=134.9
Q ss_pred CCCHHHHHHHHHHHHHHHHH----HHHHHHhcCCcc------ccccccccccchHHHHHHHHHhHhCCCC---CcCCCcc
Q 021183 143 KPSMDAFVKYLVDSQLVFNT----IERIVDDSNDVA------YAYFRKTGLERSEGISRDLEWFSEQGII---IPEPSTP 209 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~a----LE~al~~~~d~~------~a~f~~~eL~Rs~aLe~DL~~l~G~~~~---~~~pspa 209 (316)
.++++.|..||.|.|+++.. |+.++.+..+.. +..+...++.+-..+.+|++.+ |-++. ...|+|+
T Consensus 35 tL~~~~f~~yl~Qdy~yl~~~~r~la~a~~ka~~~~~~~~~~~~~~~~~e~~~e~~~~~~l~~~-G~~~~~~~~~~~~pa 113 (239)
T 3dde_A 35 KATKALYAIYMTETYHYTKHNAKNQALVGIMGKDLPGKYLSFCFHHAHEEAGHELMALSDIASI-GFDREDVLSSKPLPA 113 (239)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHTTTHHHHHHHHHHT-TCCHHHHHTCCCCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHChHHHHHHHHHHh-CCCHHHHHhCCCChH
Confidence 78999999999999999855 777777775432 2334446677777889998876 76654 4567888
Q ss_pred HHHHHHHHHHHhc-cCccchhhHHHHHH-hhhcchhHHHHHHHHHhc-cCCCcccceeecC--ChHHHHHHHHHHHhhcC
Q 021183 210 GVSYAKYLEELAE-KSAPLFLSHFYNIY-FSHVAGGQVIERQVSEKI-LDGRKLEVYRWEG--DPEEMLKDVREKLNMLG 284 (316)
Q Consensus 210 ~~~Yv~~L~ela~-~~P~lLLAH~YvrY-LGdLSGGQiI~r~v~r~l-l~g~GL~FY~F~g--d~~~lK~~yR~~Lnal~ 284 (316)
+.+|+++|..++. .+|..+|||+|+.. .+ .+|||++ +.+.+++ ++.++++||.|.+ |.+.+ +.|++.||.++
T Consensus 114 t~aY~~~l~~~a~~~~~~~~la~~~~~E~~y-~~~~~~~-~~l~~~~~l~~~~~~f~~~h~~~d~~h~-~~~~~~ld~~~ 190 (239)
T 3dde_A 114 TETLIAYLYWISATGNPVQRLGYSYWAENVY-GYIDPVL-KAIQSTLDLTPQSMKFFIAHSKIDAKHA-EEVNEMLHEVC 190 (239)
T ss_dssp HHHHHHHHHHHHHSSCGGGGHHHHHHHHTCH-HHHHHHH-HHHHHHTTCCGGGGHHHHHHHHHHHHHH-HHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhh-HHHHHHH-HHHHHHhCcCHHHHHHHHHHHhcchhHH-HHHHHHHHHHc
Confidence 9999999999876 58999999999722 12 3889985 6788887 7778999999986 66665 58999999998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 285 EHWTRDEKNKSLKEAAKSFKFLGQIVRLII 314 (316)
Q Consensus 285 e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I~ 314 (316)
.|++++++||++++.+|++|.++|+.|-
T Consensus 191 --~~~~~~~~ii~~a~~~~~l~~~~f~~l~ 218 (239)
T 3dde_A 191 --KTQEDVDSVVAVMENSLVLTARILDDVW 218 (239)
T ss_dssp --CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999874
No 10
>1rtw_A Transcriptional activator, putative; PF1337, TENA, thiamin, structural genomics, PSI, protein STR initiative; HET: MP5; 2.35A {Pyrococcus furiosus} SCOP: a.132.1.3
Probab=92.14 E-value=1.8 Score=37.96 Aligned_cols=155 Identities=17% Similarity=0.057 Sum_probs=88.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccc----cccccccccchHHHHHHHHHh--HhCCCCCcCCCccHH
Q 021183 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVAY----AYFRKTGLERSEGISRDLEWF--SEQGIIIPEPSTPGV 211 (316)
Q Consensus 142 w~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~~----a~f~~~eL~Rs~aLe~DL~~l--~G~~~~~~~pspa~~ 211 (316)
-.++.+.|..||.|=|+.-...=+++... .+..- ..+. .-...++.++.-+ .|-+. ...|+|++.
T Consensus 29 GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~l~----~~~~~iE~~lh~~~~~Gi~~-~~~~~p~t~ 103 (220)
T 1rtw_A 29 NTIKKENFEKWLVNDYYFVKNALRFMALLMAKAPDDLLPFFAESIY----YISKELEMFEKKAQELGISL-NGEIDWRAK 103 (220)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHH----HHHHHHHHHHHHHHHTTCCS-SSCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHH----HHHHHHHHHHHHHHHCCCCC-CCCCCHHHH
Confidence 37899999999999888776665555443 22111 0110 0001113333221 13332 456778899
Q ss_pred HHHHHHHHHhcc-CccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccceee---cC--ChHHHHHHHHHHHhhcCC
Q 021183 212 SYAKYLEELAEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRW---EG--DPEEMLKDVREKLNMLGE 285 (316)
Q Consensus 212 ~Yv~~L~ela~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F---~g--d~~~lK~~yR~~Lnal~e 285 (316)
.|++++-.++.. ++..+++-.+.-+-+- ..|++.+.+...+ .-.|..| .+ +-...-+..++.||.+++
T Consensus 104 aY~~~l~~~a~~~~~~~~laAl~pc~~~Y----~~i~~~l~~~~~~--~~~y~~Wi~~y~~~~f~~~v~~~~~~ld~~~~ 177 (220)
T 1rtw_A 104 SYVNYLLSVASLGSFLEGFTALYCEEKAY----YEAWKWVRENLKE--RSPYQEFINHWSSQEFGEYVKRIEKILNSLAE 177 (220)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHHHHHCSS--CCTTHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHHH----HHHHHHHHhccCC--CchHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999864 5555665544443222 3344444443221 1222333 33 235677788999999877
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH
Q 021183 286 HWTRDEKNKSLKEAAKSFKFLG 307 (316)
Q Consensus 286 ~Ld~eEk~~iIeEA~~AF~lN~ 307 (316)
..|+++++++.+--..+-++-.
T Consensus 178 ~~~~~~~~~~~~~f~~a~~lE~ 199 (220)
T 1rtw_A 178 KHGEFEKERAREVFKEVSKFEL 199 (220)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHH
Confidence 7888888776665555554433
No 11
>3ibx_A TENA, HP1287, putative thiaminase II; vitamin B1, hydrol; 2.40A {Helicobacter pylori} PDB: 2rd3_A
Probab=91.23 E-value=4.2 Score=35.62 Aligned_cols=144 Identities=16% Similarity=0.116 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc----cc----ccccccccchHHHHHHHHHhHhCCC---CCcCCC
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA----YA----YFRKTGLERSEGISRDLEWFSEQGI---IIPEPS 207 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~----~a----~f~~~eL~Rs~aLe~DL~~l~G~~~---~~~~ps 207 (316)
.++.+.|..||.|=|+.-...=+++... .++. +. .....|+ .+-.++..-.|-+. ....|+
T Consensus 35 tL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~~E~----~~h~~~~~~~Gi~~~~~~~~~~~ 110 (221)
T 3ibx_A 35 TLERDKFRFYIIQDYLYLLEYAKVFALGVVKACDEAVMREFSNAIQDILNNEM----SIHNHYIRELQITQKELQNACPT 110 (221)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHSCTT----SHHHHHHHHTTCCHHHHHHCCCC
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCCHHHHhhccCC
Confidence 7999999999999888776665555433 2211 00 1111122 22233222123221 134678
Q ss_pred ccHHHHHHHHHHHhcc-CccchhhH---HHHHHhhhcchhHHHHHHHHHhccCCCcccce-ee---cC--ChHHHHHHHH
Q 021183 208 TPGVSYAKYLEELAEK-SAPLFLSH---FYNIYFSHVAGGQVIERQVSEKILDGRKLEVY-RW---EG--DPEEMLKDVR 277 (316)
Q Consensus 208 pa~~~Yv~~L~ela~~-~P~lLLAH---~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY-~F---~g--d~~~lK~~yR 277 (316)
|++..|++++..++.. ++..+++- |+..| .-|++.+.+..-. ...++| .| ++ +-....+..+
T Consensus 111 p~~~aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y-------~~ig~~l~~~~~~-~~~~~y~~WI~~y~~~~f~~~v~~~~ 182 (221)
T 3ibx_A 111 LANKSYTSYMLAEGFKGSIKEVAAAVLSCGWSY-------LVIAQNLSQIPNA-LEHAFYGHWIKGYSSKEFQACVNWNI 182 (221)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHTHHHHHHH-------HHHHHHHTCSSST-TTCTTTHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------HHHHHHHHhcCCC-CCCChHHHHHHHhCCHHHHHHHHHHH
Confidence 8899999999999875 44445544 44555 2333344322111 123444 34 22 3456667888
Q ss_pred HHHhhcCCCCCHHHHHHHHHH
Q 021183 278 EKLNMLGEHWTRDEKNKSLKE 298 (316)
Q Consensus 278 ~~Lnal~e~Ld~eEk~~iIeE 298 (316)
+.||.+++..++++++++.+-
T Consensus 183 ~~ld~~~~~~~~~~~~~~~~~ 203 (221)
T 3ibx_A 183 NLLDSLTLASSKQEIEKLKEI 203 (221)
T ss_dssp HHHHHHCTTCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHH
Confidence 999999888899888765443
No 12
>4fn6_A Thiaminase-2, thiaminase II; alpha-helix, vitamin B1, BI-functional enzyme, C of thiamine INTO HMP and THZ; HET: CME; 2.69A {Staphylococcus aureus}
Probab=91.22 E-value=0.83 Score=40.47 Aligned_cols=145 Identities=12% Similarity=0.126 Sum_probs=85.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcC----Ccc----c----cccccccccchHHHHHHHHHhHhCCC----CCcCC
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDSN----DVA----Y----AYFRKTGLERSEGISRDLEWFSEQGI----IIPEP 206 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~~----d~~----~----a~f~~~eL~Rs~aLe~DL~~l~G~~~----~~~~p 206 (316)
.++.+.|..||.|=|+.-...=+++.... ++. + ......|+ .+-.++..-.|-+. ....|
T Consensus 31 tL~~~~f~~YL~QDy~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~~E~----~~h~~~~~~~gi~~~~~~~~~~~ 106 (229)
T 4fn6_A 31 NIQADALRHYLQADAAYLKEFTNLYALLIPKMNSMNDVKFLVEQIEFMVEGEV----LAHDILAQIVGESYEEIIKTKVW 106 (229)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHSCCC----HHHHHHHHHHTSCHHHHHHSCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcCCCHHHHhhhcCC
Confidence 79999999999998888777777666543 211 0 01111122 23333322234332 22467
Q ss_pred CccHHHHHHHHHHHhcc--CccchhhH---HHHHHhhhcchhHHHHHHHHHhccCCCcccceeec---C-ChHHHHHHHH
Q 021183 207 STPGVSYAKYLEELAEK--SAPLFLSH---FYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRWE---G-DPEEMLKDVR 277 (316)
Q Consensus 207 spa~~~Yv~~L~ela~~--~P~lLLAH---~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F~---g-d~~~lK~~yR 277 (316)
+|++..|++++..++.. ++..+++- ||..| ..|++.+.+.-....+-.|..|= + +-....+..+
T Consensus 107 ~p~~~aY~~~l~~~a~~~~~~~~~~aAl~pC~~~Y-------~~ig~~l~~~~~~~~~~~y~~WI~~y~~~f~~~v~~~~ 179 (229)
T 4fn6_A 107 PPSGDHYIKHMYFQAHSRENAIYTIAAMAPCPYIY-------AELAKRSQSDHKLNREKDTAKWFDFYSTEMDDIINVFE 179 (229)
T ss_dssp CHHHHHHHHHHHHHHHHCCSHHHHHHHHTHHHHHH-------HHHHHHHHTCTTCCTTSTHHHHHHHHTTTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH-------HHHHHHHHHcCCCCCCChHHHHHHHHhHHHHHHHHHHH
Confidence 88899999999999876 55445444 55566 34444444322111222232332 2 3455666888
Q ss_pred HHHhhcCCCCCHHHHHHHHHH
Q 021183 278 EKLNMLGEHWTRDEKNKSLKE 298 (316)
Q Consensus 278 ~~Lnal~e~Ld~eEk~~iIeE 298 (316)
+.||.+++..++++++++.+-
T Consensus 180 ~~ld~~~~~~~~~~~~~~~~~ 200 (229)
T 4fn6_A 180 SLMNKLAESMSDKELEQVKQV 200 (229)
T ss_dssp HHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHH
Confidence 999999888898888765543
No 13
>2qcx_A Transcriptional activator TENA; UP-DOWN bundle, hydrolase; HET: PF1; 2.20A {Bacillus subtilis} PDB: 1yak_A* 1yaf_A* 1to9_A* 1tyh_A
Probab=90.28 E-value=1.2 Score=40.59 Aligned_cols=160 Identities=12% Similarity=0.128 Sum_probs=87.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc-ccccc---cccccchHHHHHHHHHhHhCCC---CCcCCCccH
Q 021183 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA-YAYFR---KTGLERSEGISRDLEWFSEQGI---IIPEPSTPG 210 (316)
Q Consensus 142 w~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~-~a~f~---~~eL~Rs~aLe~DL~~l~G~~~---~~~~pspa~ 210 (316)
-.++.+.|..||.|=|+.-...=+++... .++. ...|. ...++.--.+-+++..-.|-+. ....|+|++
T Consensus 57 GtL~~e~f~~YL~QDy~yL~~f~r~la~a~aka~~~~~~~~l~~~i~~~~~~E~~lh~~~~~~~Gi~~~~l~~~~~~pat 136 (263)
T 2qcx_A 57 GTLPIDRFKYYVLQDSYYLTHFAKVQSFGAAYAKDLYTTGRMASHAQGTYEAEMALHREFAELLEISEEERKAFKPSPTA 136 (263)
T ss_dssp SCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHSCCCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHH
Confidence 37999999999999888776655555443 2321 00010 0000000112222221123221 135678889
Q ss_pred HHHHHHHHHHhcc-CccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccceee---cCC--hHHHHHHHHHHHhhcC
Q 021183 211 VSYAKYLEELAEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRW---EGD--PEEMLKDVREKLNMLG 284 (316)
Q Consensus 211 ~~Yv~~L~ela~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F---~gd--~~~lK~~yR~~Lnal~ 284 (316)
..|++++-.++.. ++..+++-.+.-+.+- ..|++.+.+...+ .-.|..| .++ -.+.-+..++.||.++
T Consensus 137 ~aYt~~l~~~a~~g~~~~~laAl~pC~w~Y----~~ig~~l~~~~~~--~~~Y~~WI~~y~~~df~~~v~~~~~lld~l~ 210 (263)
T 2qcx_A 137 YSFTSHMYRSVLSGNFAEILAALLPCYWLY----YEVGEKLLHCDPG--HPIYQKWIGTYGGDWFRQQVEEQINRFDELA 210 (263)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHHH----HHHHHHHTTCCCC--SHHHHHHHHHHSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHHHHhccCC--CcHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999865 5555665544433221 2344444332211 1222233 332 3567778899999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q 021183 285 EHWTRDEKNKSLKEAAKSFKFLG 307 (316)
Q Consensus 285 e~Ld~eEk~~iIeEA~~AF~lN~ 307 (316)
+..++++++++.+--..+-++-.
T Consensus 211 ~~~s~~~~~~l~~~F~~a~~lE~ 233 (263)
T 2qcx_A 211 ENSTEEVRAKMKENFVISSYYEY 233 (263)
T ss_dssp HTSCHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHHHHHHHHHHH
Confidence 77888888776665555544433
No 14
>3oql_A TENA homolog; transcriptional activator, structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.54A {Pseudomonas syringae PV}
Probab=89.85 E-value=0.74 Score=42.59 Aligned_cols=162 Identities=10% Similarity=0.071 Sum_probs=91.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhcC----Cc------cccccccccccchHHHHHHH--HHhHhCCCC-----CcC
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDSN----DV------AYAYFRKTGLERSEGISRDL--EWFSEQGII-----IPE 205 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~~----d~------~~a~f~~~eL~Rs~aLe~DL--~~l~G~~~~-----~~~ 205 (316)
.++.+.|+.||.|-|..-...=+++.-.. +. ....|.. +.-..+.+-.|+ .|+.+.+.. ...
T Consensus 49 tL~~e~Fr~Yl~QDy~YL~~far~~Al~~aKa~~~~~~~~~~~~~~l~-~~i~vE~~H~~~~~~f~~~~Gis~eel~~~~ 127 (262)
T 3oql_A 49 KLSPQIMRQYLIGGWPVVEQFAVYMAKNLTKTRFGRHPGEDMARRWLM-RNIRVELNHADYWVNWCAAHDVTLEDLHDQR 127 (262)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCHHHHHHHHHHH-HHHHHTTTHHHHHHHHHHTTTCCHHHHHHTC
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhCccccCCChHHHHHHHH-HHHHHHHhhHHHHHHHHHHcCCCHHHHhcCC
Confidence 79999999999987776665555554321 10 0011100 000011112232 333222322 335
Q ss_pred CCccHHHHHHHHHHHhccCc-cchhhHH-HHHHhhhcchhHHHHH---------HHHHhc-c--CCCcccceeecCChHH
Q 021183 206 PSTPGVSYAKYLEELAEKSA-PLFLSHF-YNIYFSHVAGGQVIER---------QVSEKI-L--DGRKLEVYRWEGDPEE 271 (316)
Q Consensus 206 pspa~~~Yv~~L~ela~~~P-~lLLAH~-YvrYLGdLSGGQiI~r---------~v~r~l-l--~g~GL~FY~F~gd~~~ 271 (316)
|+|.+.+|++++-.++...+ ...+|-. |..| ..|++ +....+ . +...+.|+++...-.+
T Consensus 128 ~~P~~~aYt~~ml~~a~~g~l~e~lAAl~ya~e-------~~ig~~s~~~~~g~~~~~~~~~~~~~~~~~w~~~h~~~D~ 200 (262)
T 3oql_A 128 VAPELHALSHWCWQTSSSDSLAVAMAATNYAIE-------GATGEWSAVVCSTGVYAEAFAEETRKKSMKWLKMHAQYDD 200 (262)
T ss_dssp SCGGGGHHHHHHHHHHHHSCHHHHHHHTTTHHH-------HHHHHHHHHHHSSSHHHHTSCHHHHHHHHHHHHHHHTCC-
T ss_pred CChHHHHHHHHHHHHHccCCHHHHHHHHHHHHH-------HHhhhHHHHhhhhHHHhcCCCcccChHHHHHHHHHHHHHH
Confidence 67778899999999976543 3455544 8888 55565 222222 0 1124456655542222
Q ss_pred H-HHHHHHHHhhcCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 272 M-LKDVREKLNMLGEHW-TRDEKNKSLKEAAKSFKFLGQIVRL 312 (316)
Q Consensus 272 l-K~~yR~~Lnal~e~L-d~eEk~~iIeEA~~AF~lN~~I~r~ 312 (316)
. -....+.||.+.+.- |+++++++.+.+.++..+-...+.-
T Consensus 201 ~H~~e~~~li~~l~~~~~~~~e~~~~~~a~~~S~~~~~~fld~ 243 (262)
T 3oql_A 201 AHPWEALEIICTLVGNKPSLQLQAELRQAVTKSYDYMYLFLER 243 (262)
T ss_dssp CHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 345567777776555 8999999999999988876665543
No 15
>2f2g_A SEED maturation protein PM36 homolog; TENA_THI-4 domain, TENA/THI-4/PQQC family, AT3G16990, struct genomics, protein structure initiative; HET: HMH; 2.10A {Arabidopsis thaliana} SCOP: a.132.1.3 PDB: 2q4x_A*
Probab=89.64 E-value=0.9 Score=39.68 Aligned_cols=161 Identities=11% Similarity=0.067 Sum_probs=86.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC----Ccc-----cccccc--ccccchHHHHHHHHHhHhCCCCCcCCCc
Q 021183 140 ETWKPSMDAFVKYLVDSQLVFNTIERIVDDSN----DVA-----YAYFRK--TGLERSEGISRDLEWFSEQGIIIPEPST 208 (316)
Q Consensus 140 ~~w~~s~e~Y~~lL~~ly~VY~aLE~al~~~~----d~~-----~a~f~~--~eL~Rs~aLe~DL~~l~G~~~~~~~psp 208 (316)
+.-.++.+.|..||.|=|+.-...=+++.... +.. ...+.. .++..--.+-+++..-.|-+.....|+|
T Consensus 31 ~~GtL~~~~f~~yL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~l~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~p 110 (221)
T 2f2g_A 31 RDGSVDLSSFRTWLGQDYLFVRRFVPFVASVLIRACKDSGESSDMEVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQR 110 (221)
T ss_dssp ETTEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCH
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhcCCCH
Confidence 33478899999999998887766655554432 111 001100 0011111222222111232222456778
Q ss_pred cHHHHHHHHHHH-hcc-CccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccceee---cCC--hHHHHHHHHHHHh
Q 021183 209 PGVSYAKYLEEL-AEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRW---EGD--PEEMLKDVREKLN 281 (316)
Q Consensus 209 a~~~Yv~~L~el-a~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F---~gd--~~~lK~~yR~~Ln 281 (316)
++..|++++..+ +.. ++..+++-.+.-+-+-.-=|+.+.+.+ .. ..+ .|..| .++ -...-+..++.||
T Consensus 111 ~~~aY~~~l~~~~~~~~~~~~~~aAl~pc~~~Y~~i~~~l~~~~--~~-~~~--~y~~Wi~~y~~~~f~~~v~~~~~~ld 185 (221)
T 2f2g_A 111 ANQEYGRFLEDLMSSEVKYPVIMTAFWAIEAVYQESFAHCLEDG--NK-TPV--ELTGACHRWGNDGFKQYCSSVKNIAE 185 (221)
T ss_dssp HHHHHHHHHHHTTSTTSCHHHHHHHHHHHHHHHHHHTTTHHHHH--HT-SSS--CCCHHHHHHSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHhcc--CC-CCc--HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 889999999999 654 555555554444332222233332211 21 111 23334 332 3567778999999
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHH
Q 021183 282 MLGEHWTRDEKNKSLKEAAKSFKF 305 (316)
Q Consensus 282 al~e~Ld~eEk~~iIeEA~~AF~l 305 (316)
.+++..++++++++.+--..+-++
T Consensus 186 ~~~~~~~~~~~~~~~~~f~~a~~l 209 (221)
T 2f2g_A 186 RCLENASGEVLGEAEDVLVRVLEL 209 (221)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHH
Confidence 987778888887665554444443
No 16
>3no6_A Transcriptional activator TENA; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.65A {Staphylococcus epidermidis} SCOP: a.132.1.0
Probab=88.28 E-value=2.7 Score=37.99 Aligned_cols=150 Identities=17% Similarity=0.111 Sum_probs=83.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcC----Ccc----ccccccccccchHHHHHHHHHhHhCCC----CCcCCCcc
Q 021183 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDSN----DVA----YAYFRKTGLERSEGISRDLEWFSEQGI----IIPEPSTP 209 (316)
Q Consensus 142 w~~s~e~Y~~lL~~ly~VY~aLE~al~~~~----d~~----~a~f~~~eL~Rs~aLe~DL~~l~G~~~----~~~~pspa 209 (316)
-.++.+.|..||.|=|..-...=+++.... +.. +..+...-+.+--.+-.++..-.|-+. ....|+|+
T Consensus 49 GtL~~e~F~~YL~QD~~YL~~far~~a~a~aka~~~~~~~~~~~~~~~~~~~E~~lh~~~~~~~gi~~~~~~~~~~~~p~ 128 (248)
T 3no6_A 49 GKLSNQAVRQYLRADASYLKEFTNIYAMLIPKMSSMEDVKFLVEQIEFMLEGEVEAHEVLADFINEPYEEIVKEKVWPPS 128 (248)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTCCCHHHHHHHHHTTSCHHHHCCSCCCCHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcCCCHH
Confidence 389999999999998887777666665442 211 000000001111123333222223321 23467788
Q ss_pred HHHHHHHHHHHhcc--Cccchhh---HHHHHHhhhcchhHHHHHHHHHhccCCCcccceeec---C-ChHHHHHHHHHHH
Q 021183 210 GVSYAKYLEELAEK--SAPLFLS---HFYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRWE---G-DPEEMLKDVREKL 280 (316)
Q Consensus 210 ~~~Yv~~L~ela~~--~P~lLLA---H~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F~---g-d~~~lK~~yR~~L 280 (316)
+.+|+++|..++.. +...+++ -|+..| ..|++.+.+.-....+--|-.|= + +-....+..++.|
T Consensus 129 ~~aYt~~ll~~a~~~g~~~~~laAl~PC~w~Y-------~eig~~l~~~~~~~~~~~Y~~WI~~Y~~ef~~~v~~~~~~l 201 (248)
T 3no6_A 129 GDHYIKHMYFNAFARENAAFTIAAMAPCPYVY-------AVIGKRAMEDPKLNKESVTSKWFQFYSTEMDELVDVFDQLM 201 (248)
T ss_dssp HHHHHHHHHHHHHHCSSTHHHHHHHTHHHHHH-------HHHHHHHHHCTTCCTTSTTHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH-------HHHHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999876 3433333 366666 34444554432111222222231 2 2344556788999
Q ss_pred hhcCCCCCHHHHHHHHHH
Q 021183 281 NMLGEHWTRDEKNKSLKE 298 (316)
Q Consensus 281 nal~e~Ld~eEk~~iIeE 298 (316)
|.+++..++++++++.+-
T Consensus 202 d~~~~~~s~~~~~~l~~~ 219 (248)
T 3no6_A 202 DRLTKHCSETEKKEIKEN 219 (248)
T ss_dssp HHHTTTCCHHHHHHHHHH
T ss_pred HHHhhhCCHHHHHHHHHH
Confidence 999888898888766543
No 17
>3bjd_A Putative 3-oxoacyl-(acyl-carrier-protein) synthas; structural genomics, APC5632, 3-oxoacyl-(acyl-carrier-protei synthase, PSI-2; HET: MSE; 1.85A {Pseudomonas aeruginosa PAO1}
Probab=85.06 E-value=18 Score=34.05 Aligned_cols=158 Identities=11% Similarity=0.057 Sum_probs=88.1
Q ss_pred CCCHHHHHHHHHHHHHHH----HHHHHHHHhcCCcc----ccc----c---ccccccchHHHHHHHHHhHhCC--CCCcC
Q 021183 143 KPSMDAFVKYLVDSQLVF----NTIERIVDDSNDVA----YAY----F---RKTGLERSEGISRDLEWFSEQG--IIIPE 205 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY----~aLE~al~~~~d~~----~a~----f---~~~eL~Rs~aLe~DL~~l~G~~--~~~~~ 205 (316)
..+++.|..|+.+-|+.- +.+=.++.+..++. +.. - -.++..-.+...+.++.+ |-+ +....
T Consensus 136 ~Ls~e~~r~yl~Qdy~yl~~f~~~lA~~~a~~~~~~~r~~l~e~i~DE~G~g~~e~~H~el~~~~l~~l-Gld~~~~~~~ 214 (332)
T 3bjd_A 136 SASRAQLQVFLRHQWFRTFRLYRDAADLLVNLTDVDEAAALARYLYGELGEEDEKGSHPRLLAKLLEAI-GLEADFQAVS 214 (332)
T ss_dssp CCCHHHHHHHHHHHHHHHTTHHHHHHHHHHTCCSHHHHHHHHHHHHHHTTTTCGGGCHHHHHHHHHHHT-TCCCCTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCCCccccHHHHHHHHHHHc-CCChhHhccc
Confidence 789999999999977643 23333333333321 111 0 011111145556666665 544 33333
Q ss_pred CCccHHHHHHHHHHHhc-cCccchhhHHHHHHhhhcchhHHHHHHHHHhc-cCCCcccceeec----C-ChHHHHHHHHH
Q 021183 206 PSTPGVSYAKYLEELAE-KSAPLFLSHFYNIYFSHVAGGQVIERQVSEKI-LDGRKLEVYRWE----G-DPEEMLKDVRE 278 (316)
Q Consensus 206 pspa~~~Yv~~L~ela~-~~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~l-l~g~GL~FY~F~----g-d~~~lK~~yR~ 278 (316)
+.|.+..|+++....+. .++..++|+.++..+--..+-+-|.+.+.+ + ++..+..||+-- . .....+ ..
T Consensus 215 ~~p~~~~~v~~~~~~~~~~~~~~alaal~~~E~~~p~~y~~i~~~l~~-~g~~~~~~~yf~~HI~lD~~H~~~~~---~~ 290 (332)
T 3bjd_A 215 TMPEEIAYLNNRARAFRHAEVGWGLAVFYITELVVPGNHEKLYRALLQ-AGLSEDQAEYYKVHISLVPPRAKREW---QL 290 (332)
T ss_dssp CCHHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCTTTTHHHHHHHHHCC---CTTH---HH
T ss_pred CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhHHHHHHHHHHHHH-cCCCcccchHHHHHHHHhHHHHHHHH---HH
Confidence 45556789999998865 456678899887775444444555556655 4 433466777532 1 222223 33
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 021183 279 KLNMLGEHWTRDEKNKSLKEAAKSFKFLGQ 308 (316)
Q Consensus 279 ~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~ 308 (316)
-++.+. ++++++.++..+..++++-.+
T Consensus 291 ll~~~~---~~~~q~~~~~a~~~~l~~~~~ 317 (332)
T 3bjd_A 291 IARRIP---DVQFQNAFLTSLSQHFRVERA 317 (332)
T ss_dssp HHTTTT---CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCC---CHHHHHHHHHHHHHHHHHHHH
Confidence 566663 566666788888555443333
No 18
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=82.29 E-value=7.4 Score=33.55 Aligned_cols=161 Identities=11% Similarity=0.078 Sum_probs=86.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccc----ccccccc----ccchHHHHHHHHHhHhCCC---CCcCCC
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVAY----AYFRKTG----LERSEGISRDLEWFSEQGI---IIPEPS 207 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~~----a~f~~~e----L~Rs~aLe~DL~~l~G~~~---~~~~ps 207 (316)
.++++.|..||.+-|+.-...=+.+... .++.. ......+ ..=.+...++++.+ |-+. ....|+
T Consensus 34 ~L~~e~~~~yl~qdy~yl~~f~~~~a~~~~~~~~~~~~~~~~~~i~~e~~~~~~h~~l~~~~~~~~-Gi~~~~~~~~~~~ 112 (231)
T 1rcw_A 34 ELTKEQLQAYAKDYYLHIKAFPKYLSAIHSRCDDLEARKLLLDNLMDEENGYPNHIDLWKQFVFAL-GVTPEELEAHEPS 112 (231)
T ss_dssp CCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHT-TCCHHHHHHCCCC
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHc-CCCHHHHhcCCCC
Confidence 7899999999999665444444433322 22210 0000011 01122333333333 4332 134577
Q ss_pred ccHHHHHHHHHHHhcc-CccchhhHHHHHHhhhcchhHHHHHHHHH---hc-c-CCCcccceeecC--ChHHHHHHHHHH
Q 021183 208 TPGVSYAKYLEELAEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSE---KI-L-DGRKLEVYRWEG--DPEEMLKDVREK 279 (316)
Q Consensus 208 pa~~~Yv~~L~ela~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r---~l-l-~g~GL~FY~F~g--d~~~lK~~yR~~ 279 (316)
|++..|++++-.++.. ++..++|-.+ .| ..+ |.++..+.+.. .+ + +..+..||.--+ | .+--...++.
T Consensus 113 p~t~~y~~~~~~~~~~~~~~~~laal~-~~-E~~-~~~~~~~~~~~~~~~~~wi~~~~~~~f~~h~~~d-~~h~~~~~~~ 188 (231)
T 1rcw_A 113 EAAKAKVATFMRWCTGDSLAAGVAALY-SY-ESQ-IPRIAREKIRGLTEYFGFSNPEDYAYFTEHEEAD-VRHAREEKAL 188 (231)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHH-HH-HTT-HHHHHHHHHHHHHHHSCCCSGGGGHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHH-HH-HHH-HHHHHHHHHHHHHHHCCCCChhhhHHHHHHHHHh-HHHHHHHHHH
Confidence 8889999999999876 4555666654 44 222 44443333321 12 2 234555554322 2 2344567778
Q ss_pred HhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 280 LNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRL 312 (316)
Q Consensus 280 Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~ 312 (316)
||.+.+ ++++++++-...+.++-...+..
T Consensus 189 l~~~~~----~~~~~~~~~~~~~~~le~~fwd~ 217 (231)
T 1rcw_A 189 IEMLLK----DDADKVLEASQEVTQSLYGFLDS 217 (231)
T ss_dssp HHHHCS----SCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 888863 46667777777777776665543
No 19
>3rm5_A Hydroxymethylpyrimidine/phosphomethylpyrimidine K THI20; HMP kinase (THID), thiaminase II, transferase; 2.68A {Saccharomyces cerevisiae}
Probab=79.00 E-value=6.6 Score=39.30 Aligned_cols=146 Identities=9% Similarity=0.068 Sum_probs=81.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc-ccccccccccchHHHHHHHHHhHh---CCCC--------Cc
Q 021183 141 TWKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA-YAYFRKTGLERSEGISRDLEWFSE---QGII--------IP 204 (316)
Q Consensus 141 ~w~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~-~a~f~~~eL~Rs~aLe~DL~~l~G---~~~~--------~~ 204 (316)
.-.++.+.|..||.|=|+.....=+++... .+.. ...|. +. ...|...+.++.. ..|. ..
T Consensus 360 ~GtL~~~~F~~YL~QD~~yL~~far~~a~a~aka~~~~~~~~~~--~~--~~~i~~E~~~h~~~~~~~~gi~~~~~~~~~ 435 (550)
T 3rm5_A 360 DGTLERKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKEL--VI--VGGVRTEMGQHEKRLKEVFGVKDPDYFQKI 435 (550)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSHHHHHHHH--HH--HHHHHHHHHHHHHHHHHTSCCCCTTTTTSC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHhCCCCHHHHhhc
Confidence 337899999999999887776655555443 2321 11111 00 1223333333221 1222 34
Q ss_pred CCCccHHHHHHHHHHHhccCc-cc---hhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccceee---cC--ChHHHHHH
Q 021183 205 EPSTPGVSYAKYLEELAEKSA-PL---FLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRW---EG--DPEEMLKD 275 (316)
Q Consensus 205 ~pspa~~~Yv~~L~ela~~~P-~l---LLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F---~g--d~~~lK~~ 275 (316)
.++|++.+|++++..++.... .. .|.-|+-.| ..|++.+.+......+--|..| ++ +-..+-+.
T Consensus 436 ~~~p~~~aYt~~l~~~a~~g~~~~~~aAl~pC~~~Y-------~~ig~~l~~~~~~~~~~~Y~~WI~~Y~~~~f~~~v~~ 508 (550)
T 3rm5_A 436 KRGPALRAYSRYFNDVSRRGNWQELVASLTPCLMGY-------GEALTKMKGKVTAPEGSVYHEWCETYASSWYREAMDE 508 (550)
T ss_dssp CCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH-------HHHHHTTTTCCCSCTTSHHHHHHHHTTSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH-------HHHHHHHHhccCCCCCchHHHHHHHhCCHHHHHHHHH
Confidence 567788999999999987643 22 334466666 2344433322111122223344 22 34566678
Q ss_pred HHHHHhhcCCCCCHHHHHHHHH
Q 021183 276 VREKLNMLGEHWTRDEKNKSLK 297 (316)
Q Consensus 276 yR~~Lnal~e~Ld~eEk~~iIe 297 (316)
.++.||++++..++++++++.+
T Consensus 509 ~~~~ld~~~~~~~~~~~~~l~~ 530 (550)
T 3rm5_A 509 GEKLLNHILETYPPEQLDTLVT 530 (550)
T ss_dssp HHHHHHHHHTTSCGGGHHHHHH
T ss_pred HHHHHHHHHhhCCHHHHHHHHH
Confidence 8899999987888887766543
No 20
>2a2m_A Hypothetical protein BT3146; putative TENA family transcriptional regulator, structural G joint center for structural genomics; 1.88A {Bacteroides thetaiotaomicron} SCOP: a.132.1.3 PDB: 2a2o_A
Probab=78.81 E-value=29 Score=31.28 Aligned_cols=127 Identities=13% Similarity=0.056 Sum_probs=73.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccccccccccchH--------HHHHHHHHhHhCCCC-CcCCCcc
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVAYAYFRKTGLERSE--------GISRDLEWFSEQGII-IPEPSTP 209 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~~a~f~~~eL~Rs~--------aLe~DL~~l~G~~~~-~~~pspa 209 (316)
.++.+.|..||.|=|..-...=+++... .+ . ...+.. .|-.++..-.|-+.. ...|+|+
T Consensus 78 tL~~e~F~~YL~QDy~yL~~far~~a~a~aka~~-~-------~~~~~~~~~~~~~~~lh~~~~~~~Gi~~~~~~~~~pa 149 (258)
T 2a2m_A 78 TLDPNAYGSLMVQDGYYCFRGRDDYATAATCAQD-E-------TLREFFKAKAKSYDEYNETYHQTWHLREASGLIPGTD 149 (258)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-H-------HHHHHHHHHHHHHHHHHHHHHHTSCBCCGGGBCCCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-H-------HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHccCCCHH
Confidence 7899999999999888777666665543 22 1 111111 222221111121111 2466778
Q ss_pred HHHHHHHHHHHhcc-Cccchhh---HHHHHHhhhcchhHHHHHHHHHhccCCCcccce----e-ecCChHHHHHHHHHHH
Q 021183 210 GVSYAKYLEELAEK-SAPLFLS---HFYNIYFSHVAGGQVIERQVSEKILDGRKLEVY----R-WEGDPEEMLKDVREKL 280 (316)
Q Consensus 210 ~~~Yv~~L~ela~~-~P~lLLA---H~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY----~-F~gd~~~lK~~yR~~L 280 (316)
+.+|++++..++.. +...+++ -|+..| ..|++.+.+.... . +.| . .+++. ..-+..++.|
T Consensus 150 t~aYt~~ll~~a~~g~~~~~laAl~pC~~~Y-------~eig~~l~~~~~~--~-~~Y~~WI~~~Y~~~-~~v~~~~~ll 218 (258)
T 2a2m_A 150 IKDYADYEAYVAGSLASPYMCVVMLPCEYLW-------PWIANFLDGYTPT--N-SLYRFWIEWNGGTP-NGAYQMGNML 218 (258)
T ss_dssp HHHHHHHHHHHHHHSCTHHHHHHHHHHHHHH-------HHHHHHHGGGSCT--T-STTHHHHHHHCSCC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------HHHHHHHHhccCC--C-chHHHHHHhccCCH-HHHHHHHHHH
Confidence 89999999999865 3333333 356666 3455555443211 1 333 2 33433 7888999999
Q ss_pred hhcCCCCC
Q 021183 281 NMLGEHWT 288 (316)
Q Consensus 281 nal~e~Ld 288 (316)
|.+++..+
T Consensus 219 d~~~~~~~ 226 (258)
T 2a2m_A 219 EQYRDKID 226 (258)
T ss_dssp HTTGGGSC
T ss_pred HHHHhhcc
Confidence 99864444
No 21
>1z72_A Transcriptional regulator, putative; structu genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 1.45A {Streptococcus pneumoniae} SCOP: a.132.1.3 PDB: 2a6b_A
Probab=75.95 E-value=3.8 Score=35.78 Aligned_cols=151 Identities=9% Similarity=-0.006 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc-ccccc---cccccchHHHHHHHHHhHhCCCC---CcCCCccHH
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA-YAYFR---KTGLERSEGISRDLEWFSEQGII---IPEPSTPGV 211 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~-~a~f~---~~eL~Rs~aLe~DL~~l~G~~~~---~~~pspa~~ 211 (316)
.++.+.|..||.|=|+.-...=+++... .++. ...|. ..-+..--.+-+++..-.|-+.. ...|+|++.
T Consensus 44 tL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~~Gi~~~~~~~~~~~p~t~ 123 (225)
T 1z72_A 44 TIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTK 123 (225)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTHHHHSCCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhcCCCHHHH
Confidence 7899999999999888776655555443 2321 00010 00011111222222111232222 356788899
Q ss_pred HHHHHHHHHhcc-CccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcc---cceeecCC--hHHHHHHHHHHHhhcCC
Q 021183 212 SYAKYLEELAEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKL---EVYRWEGD--PEEMLKDVREKLNMLGE 285 (316)
Q Consensus 212 ~Yv~~L~ela~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL---~FY~F~gd--~~~lK~~yR~~Lnal~e 285 (316)
.|++++-.++.. ++..+++-.+.-+.+- ..|++. .+. .+ ++- .|.+..++ -...-+..++.||.+++
T Consensus 124 aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y----~~i~~~-~~~-~~-~~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~~~ 196 (225)
T 1z72_A 124 AFQDLMYSAVASSDYAHLLVMLVIAEGLY----LDWGSK-DLA-LP-EVYIHSEWINLHRGPFFAEWVQFLVDELNRVGK 196 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHH----HHHHTC-SSC-CC-SSHHHHHHHHTTCSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHHH----HHHHHh-hcc-CC-CcchHHHHHHHhCCHHHHHHHHHHHHHHHHHHc
Confidence 999999998865 4555555443332111 123322 111 11 222 22333442 35677789999999986
Q ss_pred CCCHHHHHHHHHHHHHH
Q 021183 286 HWTRDEKNKSLKEAAKS 302 (316)
Q Consensus 286 ~Ld~eEk~~iIeEA~~A 302 (316)
. +++++ ++.+--..+
T Consensus 197 ~-~~~~~-~~~~~f~~a 211 (225)
T 1z72_A 197 N-REDLT-ELQQRWNQA 211 (225)
T ss_dssp --CCCHH-HHHHHHHHH
T ss_pred C-CHHHH-HHHHHHHHH
Confidence 6 66666 544443333
No 22
>1wwm_A Hypothetical protein TT2028; TENA/THI-4 family, putative transctiption activator, structu genomics; 2.61A {Thermus thermophilus} SCOP: a.132.1.3
Probab=64.38 E-value=39 Score=28.69 Aligned_cols=135 Identities=12% Similarity=0.080 Sum_probs=75.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccccccccccchHHHHHHHHHhHhCCCC-CcCCCccHH
Q 021183 137 NDGETWKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVAYAYFRKTGLERSEGISRDLEWFSEQGII-IPEPSTPGV 211 (316)
Q Consensus 137 ~~~~~w~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~~a~f~~~eL~Rs~aLe~DL~~l~G~~~~-~~~pspa~~ 211 (316)
.|+ .++.+.|..+|.|=|..-...=+++... .+.....|. .. ...+.....++...+.. ...|+|++.
T Consensus 22 HpF---tL~~~~f~~Yl~QD~~yL~~f~r~~a~~~~ka~~~~~~~~~-~~---~~~~~~E~~~~~~~gi~~~~~~~p~~~ 94 (190)
T 1wwm_A 22 LPL---RLDEERFRFWLQQDYPFVEALYRYQVGLLLEAPQAHRAPLV-QA---LMATVEELDWLLLQGASPSAPVHPVRA 94 (190)
T ss_dssp CCC---CCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCHHHHHHHH-HH---HHHHHHHHHHHHTTTCCSSSCCCHHHH
T ss_pred CCC---CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHcCChHHHHHHH-HH---HHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 577 8999999999998777766655555433 221111111 00 01111114455433332 346677789
Q ss_pred HHHHHHHHHhccCccchhhH---HHHHHhhhcchhHHHHHHHHHhccCCCcccce-ee---c-C-ChHHHHHHHHHHHhh
Q 021183 212 SYAKYLEELAEKSAPLFLSH---FYNIYFSHVAGGQVIERQVSEKILDGRKLEVY-RW---E-G-DPEEMLKDVREKLNM 282 (316)
Q Consensus 212 ~Yv~~L~ela~~~P~lLLAH---~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY-~F---~-g-d~~~lK~~yR~~Lna 282 (316)
+|++++..++..+...+++- ++..| ..|++.+.+ + + +.| .| + + +-...-+..++.||.
T Consensus 95 aY~~~l~~~a~~~~~~~~aAl~pc~~~Y-------~~ig~~l~~---~--~-~~y~~WI~~y~~~~f~~~v~~~~~~ld~ 161 (190)
T 1wwm_A 95 GYIALLEEMGRLPYAYRVVFFYFLNGLF-------LEAWAHHVP---E--E-GPWAELSQHWFAPEFQAVLYDLEVLARG 161 (190)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHHH-------HHHHHHHSC---S--S-SHHHHHHHHHSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHH-------HHHHHHhcc---C--C-cHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 99999999987333333333 44455 233333332 1 1 333 33 2 2 456667788889999
Q ss_pred cCCCCCHHH
Q 021183 283 LGEHWTRDE 291 (316)
Q Consensus 283 l~e~Ld~eE 291 (316)
+++..++++
T Consensus 162 ~~~~~~~~~ 170 (190)
T 1wwm_A 162 LWEDLDPEV 170 (190)
T ss_dssp HHTTSCHHH
T ss_pred HHHhCCHHH
Confidence 876677665
No 23
>3mvu_A TENA family transcriptional regulator; TENA/THI-4/PQQC family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.80A {Ruegeria SP} SCOP: a.132.1.0
Probab=64.31 E-value=30 Score=30.25 Aligned_cols=145 Identities=14% Similarity=0.127 Sum_probs=78.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc-ccccc--cccc-cchHHHHHHHHHhHhCCC---CCcCCCccHH
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA-YAYFR--KTGL-ERSEGISRDLEWFSEQGI---IIPEPSTPGV 211 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~-~a~f~--~~eL-~Rs~aLe~DL~~l~G~~~---~~~~pspa~~ 211 (316)
.++.+.|..||.|=|+.-...=+++... .+.. ...|. ...+ ..--.+-.++..-.|-+. ....|+|++.
T Consensus 37 tL~~~~f~~YL~QD~~yl~~~~r~~a~~~aka~~~~~~~~~~~~~~~~~~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~~~ 116 (226)
T 3mvu_A 37 TLPREAFLHYLQQDYVFLIHFSRAWALAVVKSETHSEMLAAVGTVNALVAEEMQLHIGICEASGISQEALFATRERAENL 116 (226)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTCCHHHHHTCCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHH
Confidence 8999999999999888776665555443 2311 00010 0000 001122222211123221 1346788899
Q ss_pred HHHHHHHHHhcc-CccchhhH---HHHHHhhhcchhHHHHHHHHHhccCCCcccceeec----C-ChHHHHHHHHHHHh-
Q 021183 212 SYAKYLEELAEK-SAPLFLSH---FYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRWE----G-DPEEMLKDVREKLN- 281 (316)
Q Consensus 212 ~Yv~~L~ela~~-~P~lLLAH---~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F~----g-d~~~lK~~yR~~Ln- 281 (316)
.|++++..++.. ++..+++- |+..| ..|++.+.+.- .+--|-.|= + +-..+.+..++.||
T Consensus 117 aY~~~l~~~a~~~~~~~~~aAl~pc~~~Y-------~~ig~~l~~~~---~~~~y~~WI~~y~~~~f~~~v~~~~~~ld~ 186 (226)
T 3mvu_A 117 AYTRFVLEAGYSGDLLDLLAALAPCVMGY-------GEIGKRLTAEA---TSTLYGDWIDTYGGDDYQAACKAVGTLLDD 186 (226)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHH-------HHHHHHHHHHC---SCSTTHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH-------HHHHHHHHhcC---CCCcchHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 999999999865 44444444 45555 23344444331 122333342 2 34556668888888
Q ss_pred ----hcCC-CCCHHHHHHHHH
Q 021183 282 ----MLGE-HWTRDEKNKSLK 297 (316)
Q Consensus 282 ----al~e-~Ld~eEk~~iIe 297 (316)
.++. ..++++++++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~ 207 (226)
T 3mvu_A 187 ALERRLGAEFTSSPRWSRLCQ 207 (226)
T ss_dssp HHHHHHCTTGGGSHHHHHHHH
T ss_pred hhHHHHhhhccChHHHHHHHH
Confidence 7765 556776665443
No 24
>1udd_A Transcriptional regulator; helix-bundle, lipid binding protein; 2.15A {Pyrococcus horikoshii} SCOP: a.132.1.3
Probab=61.21 E-value=20 Score=31.28 Aligned_cols=135 Identities=13% Similarity=0.159 Sum_probs=68.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH----HhcCCccc-ccccc--cc-ccchHHHHHHHHHhHhCCCC---CcCCCccHH
Q 021183 143 KPSMDAFVKYLVDSQLVFNTIERIV----DDSNDVAY-AYFRK--TG-LERSEGISRDLEWFSEQGII---IPEPSTPGV 211 (316)
Q Consensus 143 ~~s~e~Y~~lL~~ly~VY~aLE~al----~~~~d~~~-a~f~~--~e-L~Rs~aLe~DL~~l~G~~~~---~~~pspa~~ 211 (316)
.++.+.|..||.|=|+.-...=+++ .+. ++.- ..+.. .+ +..--.+-.++..-.|-+.. ...|+|++.
T Consensus 33 tL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka-~~~~~~~l~~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t~ 111 (226)
T 1udd_A 33 TLPLEKFKFYVLQDFNYLVGLTRALAVISSKA-EYPLMAELIELARDEVTVEVENYVKLLKELDLTLEDAIKTEPTLVNS 111 (226)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTHHHHHHHHHHHHTTHHHHHHHHHHHHTTCCHHHHHHSCCCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCCHHHH
Confidence 7899999999998887765544443 333 3210 00100 00 11111222322211232211 356788899
Q ss_pred HHHHHHHHHhcc-CccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccce-ee---cCC--hHHHHHHHHHHHhhc
Q 021183 212 SYAKYLEELAEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVY-RW---EGD--PEEMLKDVREKLNML 283 (316)
Q Consensus 212 ~Yv~~L~ela~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY-~F---~gd--~~~lK~~yR~~Lnal 283 (316)
.|++++-.++.. ++..+++-.+.-+-+- ..|++.+.+......+ +.| .| .++ -.+.-+..++.||.+
T Consensus 112 aY~~~l~~~a~~~~~~~~laAl~pc~~~Y----~~ig~~l~~~~~~~~~-~~y~~Wi~~y~~~~f~~~v~~~~~lld~~ 185 (226)
T 1udd_A 112 AYMDFMLATAYKGNIIEGLTALLPCFWSY----AEIAEYHKDKLRDNPI-KIYREWGKVYLSNEYLNLVGRLRKIIDSS 185 (226)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHTHHHHTTCSC-HHHHHHHHGGGSHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH----HHHHHHHHhccCCCCC-chHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 999999999865 5555555544433222 2333344333211112 333 23 332 356667788888877
No 25
>2gm8_A TENA homolog/THI-4 thiaminase; transcription, transferase; HET: HMH; 2.50A {Pyrobaculum aerophilum} SCOP: a.132.1.3 PDB: 2gm7_A*
Probab=60.80 E-value=82 Score=27.19 Aligned_cols=137 Identities=15% Similarity=0.166 Sum_probs=70.9
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc-ccccc---cccccchHHHHHHHHHhHhCCCC---CcCCCccH
Q 021183 142 WKPSMDAFVKYLVDSQLVFNTIERIVDDS----NDVA-YAYFR---KTGLERSEGISRDLEWFSEQGII---IPEPSTPG 210 (316)
Q Consensus 142 w~~s~e~Y~~lL~~ly~VY~aLE~al~~~----~d~~-~a~f~---~~eL~Rs~aLe~DL~~l~G~~~~---~~~pspa~ 210 (316)
-.++.+.|..||.|=|+.-...=+++... .++. ...|. ..-+..--.+-+++-.-.|-+.. ...|+|++
T Consensus 38 GtL~~~~f~~YL~QDy~yl~~f~r~~a~~~~ka~~~~~~~~l~~~~~~~i~~E~~lh~~~~~~~Gi~~~~~~~~~~~p~t 117 (221)
T 2gm8_A 38 GTLPMEKFKYYLLQDYNYLVNFAKALSLAASRAPSVDLMKTALELAYGTVTGEMANYEALLKEVGLSLRDAAEAEPNRVN 117 (221)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTCCHHHHHHSCCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHH
Confidence 37999999999999888776665555543 2221 00010 00011111222222111222211 34678889
Q ss_pred HHHHHHHHHHhcc-CccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccce-ee---cC--ChHHHHHHHHHHHhhc
Q 021183 211 VSYAKYLEELAEK-SAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVY-RW---EG--DPEEMLKDVREKLNML 283 (316)
Q Consensus 211 ~~Yv~~L~ela~~-~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY-~F---~g--d~~~lK~~yR~~Lnal 283 (316)
..|++++-.++.. ++..+++-.+.-+-+- ..|++.+.+....... +.| .| .+ +-.+.-+..++.||.+
T Consensus 118 ~aY~~~l~~~a~~~~~~~~laAl~pc~~~Y----~~ig~~l~~~~~~~~~-~~y~~Wi~~y~~~~f~~~v~~~~~lld~~ 192 (221)
T 2gm8_A 118 VSYMAYLKSTCALEGFYQCMAALLPCFWSY----AEIAERHGGKLRENPV-HVYKKWASVYLSPEYRGLVERLRAVLDSS 192 (221)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHH----HHHHHHHGGGGGGCCC-HHHHHHHHHHHSHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhHHHHH----HHHHHHHHhccCCCCC-chHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999765 5555555544433211 3345555443211112 333 33 22 2356667788888887
No 26
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=52.79 E-value=1.4e+02 Score=27.41 Aligned_cols=124 Identities=10% Similarity=0.011 Sum_probs=71.5
Q ss_pred chHHHHHHHH-HhHhCCCCCcCCCccHHHHHHHHHHHhccCccchhhHHHHHHhhhcchhHHHHHHHHHhc----cCCCc
Q 021183 185 RSEGISRDLE-WFSEQGIIIPEPSTPGVSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQVSEKI----LDGRK 259 (316)
Q Consensus 185 Rs~aLe~DL~-~l~G~~~~~~~pspa~~~Yv~~L~ela~~~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~l----l~g~G 259 (316)
-..-+++=|. .+ |-++....|+++|+.|++.+.++...+|...+|-.|-.. +---=+-.+-+.+...+ ++.+.
T Consensus 95 H~~lyRr~L~~~l-Gld~~~~~p~~sT~~~idt~~~lcs~d~~~aLGA~yatE-~iaipe~~ly~~li~gL~~~~~~~~~ 172 (244)
T 3b5o_A 95 HYTLLADGLEEGL-GVAVKNTMPSVATSKLLRTVLSLFDRQVDYVLGATYAIE-ATSIPELTLIVKLVEWLHEGAIPKDL 172 (244)
T ss_dssp HHHHHHHHHHHHH-CCCCTTCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCSSCCCHHH
T ss_pred hHHHHHHHHHHhc-CCCccccCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHHhCCCchhH
Confidence 4444444455 44 777766688899999999999998557766666666443 11011111222222222 23356
Q ss_pred ccceeec-C-ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 021183 260 LEVYRWE-G-DPEEMLKDVREKLNMLGEHWTRDEKNKSLKEAAKSFKFLGQIVRLI 313 (316)
Q Consensus 260 L~FY~F~-g-d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF~lN~~I~r~I 313 (316)
+.||++- . .-.+=.+..++.+... .+++++.++++.+..+-.....+...|
T Consensus 173 l~FF~~HidelE~~Ha~~l~~~l~~~---~~~eef~~~~~G~~~~Lda~~~fWdgL 225 (244)
T 3b5o_A 173 QYFFSKHLDEWEIEHEAGLRTSVAAY---IQPEEFGEFAAGFRAMIDAMQVWWQEL 225 (244)
T ss_dssp HHHHHHHHC-------CHHHHHHHTT---CCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHH---HhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899886 2 2233344556666555 455668888888888777666555443
No 27
>1u7k_A GAG polyprotein; capsid, viral protein; 1.85A {Endogenous} SCOP: a.73.1.1 PDB: 2y4z_A 3bp9_A
Probab=37.18 E-value=31 Score=29.05 Aligned_cols=28 Identities=36% Similarity=0.451 Sum_probs=23.4
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHH
Q 021183 273 LKDVREKLNMLGEHWTRDEKNKSLKEAAKSF 303 (316)
Q Consensus 273 K~~yR~~Lnal~e~Ld~eEk~~iIeEA~~AF 303 (316)
|++...-|..+ ||.|||.+|+.||++..
T Consensus 52 W~D~qqLL~tL---lT~EEr~ril~eArk~v 79 (131)
T 1u7k_A 52 WDDCQQLLGTL---LTGEEKQRVLLEARKAV 79 (131)
T ss_dssp HHHHHHHHHHH---SCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH---cCHHHHHHHHHHHHHHH
Confidence 55666778888 99999999999999753
No 28
>2qzc_A Transcriptional activator TENA-1; heme oxygenase-like fold, structural genomics, joint center structural genomics, JCSG; 1.50A {Sulfolobus solfataricus P2}
Probab=29.01 E-value=1.3e+02 Score=25.54 Aligned_cols=135 Identities=11% Similarity=0.066 Sum_probs=69.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHhcC---Ccc----ccccccccccchHHHHHHHHHhHhCCCC---CcCCCccH
Q 021183 141 TWKPSMDAFVKYLVDSQLVFNTIERIVDDSN---DVA----YAYFRKTGLERSEGISRDLEWFSEQGII---IPEPSTPG 210 (316)
Q Consensus 141 ~w~~s~e~Y~~lL~~ly~VY~aLE~al~~~~---d~~----~a~f~~~eL~Rs~aLe~DL~~l~G~~~~---~~~pspa~ 210 (316)
.-.++.+.|..||.|=|+.-...=+++.... ++. +......-+..--.+-+++-.-.|-+.. ...|+|++
T Consensus 33 ~GtL~~~~f~~Yl~QDy~yl~~f~r~~a~~~~ka~~~~~~~~~~~~~~~i~~E~~~h~~~~~~~Gi~~~~~~~~~~~p~t 112 (214)
T 2qzc_A 33 DGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNLVFSSRDKGLETHGKLYSKLDISRDVIVKTGYNLIN 112 (214)
T ss_dssp TSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHTCC--CHHHHHHHHHHHTTCCHHHHHHSCCCHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhCCCChHH
Confidence 3389999999999998877666555544331 321 0000000011112333332222232211 35678889
Q ss_pred HHHHHHHHHHhccCccchhhHHHHHHhhhcchhHHHHHHHHHhccCCCcccceee---cCC--hHHHHHHHHHHHhhc
Q 021183 211 VSYAKYLEELAEKSAPLFLSHFYNIYFSHVAGGQVIERQVSEKILDGRKLEVYRW---EGD--PEEMLKDVREKLNML 283 (316)
Q Consensus 211 ~~Yv~~L~ela~~~P~lLLAH~YvrYLGdLSGGQiI~r~v~r~ll~g~GL~FY~F---~gd--~~~lK~~yR~~Lnal 283 (316)
..|++++..++..++..+++-.+.-+-+- ..|++.+.+. + +-.|..| .++ -...-+..++.||.+
T Consensus 113 ~aY~~~l~~~a~~~~~~~~aAl~pc~~~Y----~~ig~~l~~~--~--~~~y~~Wi~~y~~~~f~~~v~~~~~lld~~ 182 (214)
T 2qzc_A 113 YAYTRHLYYYANLDWNKFLVAWTPCMFGY----SIVGDYVIDS--P--NEVYKTWASFYASTEYKKRIEAILYALDEV 182 (214)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHH----HHHHHHHTTC--S--CHHHHHHHHHHHSHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHH----HHHHHHHHhC--C--CChHHHHHHHhCCHHHHHHHHHHHHHHHhC
Confidence 99999999997666655555544433221 2233333322 1 1122233 222 245556777777777
No 29
>3b09_A Peptidyl-prolyl CIS-trans isomerase; Val-Leu zipper, helices, chaperone; 1.90A {Shewanella}
Probab=25.50 E-value=1.7e+02 Score=22.35 Aligned_cols=31 Identities=10% Similarity=0.074 Sum_probs=26.4
Q ss_pred ChHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q 021183 268 DPEEMLKDVREKLNMLGEHWTRDEKNKSLKE 298 (316)
Q Consensus 268 d~~~lK~~yR~~Lnal~e~Ld~eEk~~iIeE 298 (316)
|...+.+.+++.|+.-...+++++-+.++++
T Consensus 53 D~dav~~Gl~Dal~Gk~~~ls~eei~~~l~~ 83 (88)
T 3b09_A 53 DIPAVQAGLADAFAGKESAVSMEELQVAFTE 83 (88)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 8899999999999997666899998777754
No 30
>3efd_K KCSA; helix bundle, C-terminus, immune system; 2.60A {Escherichia coli}
Probab=24.09 E-value=99 Score=19.53 Aligned_cols=24 Identities=25% Similarity=0.466 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 021183 146 MDAFVKYLVDSQLVFNTIERIVDD 169 (316)
Q Consensus 146 ~e~Y~~lL~~ly~VY~aLE~al~~ 169 (316)
.++|.+-...++.-|+-||+.++.
T Consensus 6 ~eay~~atRALHeRFDRLEr~ldd 29 (30)
T 3efd_K 6 EEAYTRTTRALHERFDRLERMLDD 29 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999998864
Done!