BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021184
(316 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 394 bits (1012), Expect = e-110, Method: Compositional matrix adjust.
Identities = 184/321 (57%), Positives = 231/321 (71%), Gaps = 5/321 (1%)
Query: 1 MEKIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60
M+KI+H VA NG+NMH+A +G GP +LF+HGFPELWYSWR Q++YL+ RGYRA+APDLR
Sbjct: 8 MKKIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR 67
Query: 61 GYGDTDAPP--SITSYTALHXXXXXXXXXXEFGI--EQVFLVGHDWGALIAWYFCLLRPD 116
GYGDT P + ++ LH E+VF+V HDWGALIAW+ CL RPD
Sbjct: 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPD 127
Query: 117 RVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKF 176
+VKALVNLSV F RNP V+ +A+FG+D YI RFQ PG E +FA I ++KK
Sbjct: 128 KVKALVNLSVHFSKRNPKMNVVEGLKAIFGEDHYISRFQVPGEIEAEFAPIGAKSVLKKI 187
Query: 177 LGGRSPKPPCVPKEIGFRGLPDLRT-LPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDL 235
L R P P PK G +PD L SWLSEE+++YYA+KF Q GFTG +NYYR L +
Sbjct: 188 LTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPI 247
Query: 236 NWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAH 295
NWEL APWTGAQ+K+P KF+VG+ D+ YHIPG +EYI NGGFKKDVP L+EV+V+EG AH
Sbjct: 248 NWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAH 307
Query: 296 FINQEKADEVSSHIYDFIKQF 316
F++QE+ E+S HIYDFI++F
Sbjct: 308 FVSQERPHEISKHIYDFIQKF 328
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 393 bits (1009), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 231/321 (71%), Gaps = 5/321 (1%)
Query: 1 MEKIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60
M+KI+H VA NG+NMH+A +G GP +LF+HGFPELWYSWR Q++YL+ RGYRA+APDLR
Sbjct: 8 MKKIEHKMVAVNGLNMHLAELGEGPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLR 67
Query: 61 GYGDTDAPP--SITSYTALHXXXXXXXXXXEFGI--EQVFLVGHDWGALIAWYFCLLRPD 116
GYGDT P + ++ LH E+VF+V HDWGALIAW+ CL RPD
Sbjct: 68 GYGDTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPD 127
Query: 117 RVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKF 176
+VKALVNLSV F RNP V+ +A++G+D YI RFQ PG E +FA I ++KK
Sbjct: 128 KVKALVNLSVHFSKRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKI 187
Query: 177 LGGRSPKPPCVPKEIGFRGLPDLRT-LPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDL 235
L R P P PK G +PD L SWLSEE+++YYA+KF Q GFTG +NYYR L +
Sbjct: 188 LTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSEEELDYYANKFEQTGFTGAVNYYRALPI 247
Query: 236 NWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAH 295
NWEL APWTGAQ+K+P KF+VG+ D+ YHIPG +EYI NGGFKKDVP L+EV+V+EG AH
Sbjct: 248 NWELTAPWTGAQVKVPTKFIVGEFDLVYHIPGAKEYIHNGGFKKDVPLLEEVVVLEGAAH 307
Query: 296 FINQEKADEVSSHIYDFIKQF 316
F++QE+ E+S HIYDFI++F
Sbjct: 308 FVSQERPHEISKHIYDFIQKF 328
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 156/306 (50%), Gaps = 17/306 (5%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS 73
+ +H +G+GPAV HGFPE WYSWR Q+ L+ GYR +A D++GYG++ APP I
Sbjct: 248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 307
Query: 74 YTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133
Y + G+ Q +GHDWG ++ WY L P+RV+A+ +L+ F NP
Sbjct: 308 YCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANP 367
Query: 134 ATKPVDQYRA--LFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEI 191
P++ +A +F Y FQEPGVAE + Q + +R K + K
Sbjct: 368 NMSPLESIKANPVFDYQLY---FQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVC 423
Query: 192 GFRGL----PDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQ 247
GL P+ +L ++EE++ +Y +F + GF G LN+YR ++ NW+ G +
Sbjct: 424 EAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRK 483
Query: 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSS 307
I IP + + D +P + +++++ +P L+ + E H+ +K EV+
Sbjct: 484 ILIPALMVTAEKDFVL-VPQMSQHMEDW-----IPHLKRGHI-EDCGHWTQMDKPTEVNQ 536
Query: 308 HIYDFI 313
+ ++
Sbjct: 537 ILIKWL 542
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 174 bits (440), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 17/299 (5%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS 73
+ +H +G+GPAV HGFPE WYSWR Q+ L+ GYR +A D++GYG++ APP I
Sbjct: 29 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 88
Query: 74 YTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133
Y + G+ Q +GHDWG ++ WY L P+RV+A+ +L+ F NP
Sbjct: 89 YCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANP 148
Query: 134 ATKPVDQYRA--LFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEI 191
P++ +A +F Y FQEPGVAE + Q + +R K + K
Sbjct: 149 NMSPLESIKANPVFDYQLY---FQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVC 204
Query: 192 GFRGL----PDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQ 247
GL P+ +L ++EE++ +Y +F + GF G LN+YR ++ NW+ G +
Sbjct: 205 EAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRK 264
Query: 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVS 306
I IP + + D +P + +++++ +P L+ + E H+ +K EV+
Sbjct: 265 ILIPALMVTAEKDFVL-VPQMSQHMEDW-----IPHLKRGHI-EDCGHWTQMDKPTEVN 316
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 173 bits (439), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 153/299 (51%), Gaps = 17/299 (5%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS 73
+ +H +G+GPAV HGFPE WYSWR Q+ L+ GYR +A D++GYG++ APP I
Sbjct: 44 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEE 103
Query: 74 YTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133
Y + G+ Q +GHDWG ++ WY L P+RV+A+ +L+ F NP
Sbjct: 104 YCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANP 163
Query: 134 ATKPVDQYRA--LFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEI 191
P++ +A +F Y FQEPGVAE + Q + +R K + K
Sbjct: 164 NMSPLESIKANPVFDYQLY---FQEPGVAEAELEQ-NLSRTFKSLFRASDESVLSMHKVC 219
Query: 192 GFRGL----PDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQ 247
GL P+ +L ++EE++ +Y +F + GF G LN+YR ++ NW+ G +
Sbjct: 220 EAGGLFVNSPEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRK 279
Query: 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVS 306
I IP + + D +P + +++++ +P L+ + E H+ +K EV+
Sbjct: 280 ILIPALMVTAEKDFVL-VPQMSQHMEDW-----IPHLKRGHI-EDCGHWTQMDKPTEVN 331
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 158 bits (399), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 150/309 (48%), Gaps = 18/309 (5%)
Query: 13 GINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSIT 72
GI +H +G+GPA+ HGFPE W+SWR Q+ L+ G+R +A D++GYGD+ +PP I
Sbjct: 245 GIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIE 304
Query: 73 SYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRN 132
Y + GI Q +GHDW ++ W L P+RV+A+ +L+ F +
Sbjct: 305 EYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPD 364
Query: 133 PATKPVDQYRAL--FGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCV--- 187
P P+ R++ F Y FQEPGVAE + + + +R K F
Sbjct: 365 PDVSPMKVIRSIPVFNYQLY---FQEPGVAEAELEK-NMSRTFKSFFRASDETGFIAVHK 420
Query: 188 PKEIG--FRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTG 245
EIG P+ L +EE++ +Y +F + GF G LN+YR + NW+ G
Sbjct: 421 ATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGFRGPLNWYRNTERNWKWSCKGLG 480
Query: 246 AQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEV 305
+I +P + + DI E +N +K +P L+ + E H+ EK EV
Sbjct: 481 RKILVPALMVTAEKDIVLR----PEMSKN--MEKWIPFLKRGHI-EDCGHWTQIEKPTEV 533
Query: 306 SSHIYDFIK 314
+ + +++
Sbjct: 534 NQILIKWLQ 542
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 153/354 (43%), Gaps = 53/354 (14%)
Query: 6 HTTVATNGINMHVASIG----TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
H + G +H + GP V+ LHGFPE WYSWR Q+ L+ GYR +A D RG
Sbjct: 11 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG 70
Query: 62 YGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
YG + +Y +G EQ F+VGHDWGA +AW F L PDR +
Sbjct: 71 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGV 130
Query: 122 VNLSVVFRSRN----PAT-----KPVDQYRALFG------------DDFYICRFQE---- 156
V +SV F R P + +P D + L G D I +E
Sbjct: 131 VGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRG 190
Query: 157 -----------PGVAEEDFAQIDTARLIKKF--LGGRSPKPPCVPKEIGFRGLPDL---- 199
G+ A +D ++ + P C+ + G R L D
Sbjct: 191 WLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAE--GAR-LKDAFVYP 247
Query: 200 RTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDL 259
T+P+W +E D+++Y +F + GF G L++Y +D +W LA G + P F+ G
Sbjct: 248 ETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQY 307
Query: 260 DITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 313
D+ I G + + + +P + ++ V H+I QE +E + + DF+
Sbjct: 308 DVGT-IWGAQAIERA---HEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFL 357
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 153/354 (43%), Gaps = 53/354 (14%)
Query: 6 HTTVATNGINMHVASIG----TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
H + G +H + GP V+ LHGFPE WYSWR Q+ L+ GYR +A D RG
Sbjct: 5 HRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRG 64
Query: 62 YGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
YG + +Y +G EQ F+VGHDWGA +AW F L PDR +
Sbjct: 65 YGRSSKYRVQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGV 124
Query: 122 VNLSVVFRSRN----PAT-----KPVDQYRALFG------------DDFYICRFQE---- 156
V +SV F R P + +P D + L G D I +E
Sbjct: 125 VGISVPFAGRGVIGLPGSPFGERRPSDYHLELAGPGRVWYQDYFAVQDGIITEIEEDLRG 184
Query: 157 -----------PGVAEEDFAQIDTARLIKKF--LGGRSPKPPCVPKEIGFRGLPDL---- 199
G+ A +D ++ + P C+ + G R L D
Sbjct: 185 WLLGLTYTVSGEGMMAATKAAVDAGVDLESMDPIDVIRAGPLCMAE--GAR-LKDAFVYP 241
Query: 200 RTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDL 259
T+P+W +E D+++Y +F + GF G L++Y +D +W LA G + P F+ G
Sbjct: 242 ETMPAWFTEADLDFYTGEFERSGFGGPLSFYHNIDNDWHDLADQQGKPLTPPALFIGGQY 301
Query: 260 DITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 313
D+ I G + + + +P + ++ V H+I QE +E + + DF+
Sbjct: 302 DVGT-IWGAQAIERA---HEVMPNYRGTHMIADVGHWIQQEAPEETNRLLLDFL 351
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
Query: 2 EKIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
E KH V + +H G GP +L LHG+P W+ W K + L+ Y I PDLRG
Sbjct: 7 EDFKHYEVQLPDVKIHYVREGAGPTLLLLHGWPGFWWEWSKVIGPLAEH-YDVIVPDLRG 65
Query: 62 YGDTDAPP--SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVK 119
+GD++ P ++ Y+ GIE+ ++VGHD+ A++ F DRV
Sbjct: 66 FGDSEKPDLNDLSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVI 125
Query: 120 ALVNLSVVFRSRNPATKPV 138
+ +F P PV
Sbjct: 126 K----AAIFDPIQPDFGPV 140
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
Length = 309
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
Query: 8 TVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDA 67
TV G + G+G VLFLHG P Y WR + Y+ + GYRA+APDL G GD+ A
Sbjct: 13 TVEVEGATIAYVDEGSGQPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXGDS-A 71
Query: 68 PPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
P I Y G++ LV HDWG++I L PDRV A+
Sbjct: 72 KPDI-EYRLQDHVAYXDGFIDALGLDDXVLVIHDWGSVIGXRHARLNPDRVAAVA 125
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 5 KHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGD 64
+ T V T +++ G G +L LHG+P+ W K + L + + +A DLRGYGD
Sbjct: 6 EQTIVDTTEARINLVKAGHGAPLLLLHGYPQTHVMWHK-IAPLLANNFTVVATDLRGYGD 64
Query: 65 TDAPPSI---TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
+ P S+ +Y+ + G EQ ++VGHD GA +A L P RVK L
Sbjct: 65 SSRPASVPHHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKL 124
Query: 122 VNLSVV 127
L +
Sbjct: 125 ALLDIA 130
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXX 84
P VL +HG E +W++ L L+++GYR +APDL G+G + +TSY++L
Sbjct: 27 PVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQID 86
Query: 85 XXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
E + + LVGH GA++A +RP ++K L+
Sbjct: 87 RVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELI 124
>pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa.
pdb|4B9E|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa, With Bound Mfa
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 8 TVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDA 67
T+ T+ + VA G+GP +L LHG+P+ +W + L+ Y + DLRGYG++ A
Sbjct: 15 TLHTSAARLRVAVKGSGPPLLLLHGYPQTHLAWHRIAPRLAE-DYSVVLADLRGYGESRA 73
Query: 68 -PPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
Y+ + G E+ ++GHD GA + + L P V A V+L+V
Sbjct: 74 LDEEGADYSKAALARDQLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVAAFVSLTV 133
Query: 127 V 127
V
Sbjct: 134 V 134
>pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
pdb|1Y37|B Chain B, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
Length = 304
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 2 EKIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
E + V + ++ G+GPA+L LHGFP+ + W + L++ Y + DLRG
Sbjct: 3 EGFERRLVDVGDVTINCVVGGSGPALLLLHGFPQNLHMWARVAPLLANE-YTVVCADLRG 61
Query: 62 YGDTDAP---PSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRV 118
YG + P P +Y+ G E+ LVGHD G L PD V
Sbjct: 62 YGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHDRGGRTGHRMALDHPDSV 121
Query: 119 KALVNLSVV 127
+L L ++
Sbjct: 122 LSLAVLDII 130
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 7 TTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
T VA +G ++ G+G VLF HG+P W Q+ YLSSRGYR IA D RG+G +D
Sbjct: 2 TFVAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD 61
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKALVNLS 125
P + Y +++V LVG G +A Y RV LV L
Sbjct: 62 QPWTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 119
Query: 126 VV 127
V
Sbjct: 120 AV 121
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 7 TTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
T VA +G ++ G+G VLF HG+P W Q+ YLSSRGYR IA D RG+G +D
Sbjct: 2 TFVAKDGTQIYFKDWGSGKPVLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD 61
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKALVNLS 125
P + Y +++V LVG G +A Y RV LV L
Sbjct: 62 QPWTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 119
Query: 126 VV 127
V
Sbjct: 120 AV 121
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 12 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 70
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 71 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 128
Query: 127 V 127
+
Sbjct: 129 I 129
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 12 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 70
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 71 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 128
Query: 127 V 127
+
Sbjct: 129 I 129
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 9 VATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
V G MH +G G VLFLHG P Y WR + +++ +R IAPDL G G +D
Sbjct: 15 VEVLGERMHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAP-SHRCIAPDLIGMGKSD 73
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126
P Y G+E+V LV HDWG+ + +++ P+RVK + +
Sbjct: 74 KPD--LDYFFDDHVRYLDAFIEAVGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEF 131
Query: 127 V 127
+
Sbjct: 132 I 132
>pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
pdb|3B12|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 2 EKIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
E + V + ++ G+GPA+L LHGFP+ + W + L++ Y + DLRG
Sbjct: 3 EGFERRLVDVGDVTINCVVGGSGPALLLLHGFPQNLHMWARVAPLLANE-YTVVCADLRG 61
Query: 62 YGDTDAP---PSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRV 118
YG + P P +Y+ G E+ LVGH G L PD V
Sbjct: 62 YGGSSKPVGAPDHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSV 121
Query: 119 KALVNLSVV 127
+L L ++
Sbjct: 122 LSLAVLDII 130
>pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I
Length = 297
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 74/185 (40%), Gaps = 8/185 (4%)
Query: 12 NGINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAP 68
G+ MH G A L LHG P + +RK L ++ G R +APDL G+G +D P
Sbjct: 31 EGLRMHYVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKP 90
Query: 69 PSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128
YT +E+V LV DWG ++ + RP V L+ ++
Sbjct: 91 TDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTAL 150
Query: 129 RSRNPATKPVDQYRALFGD--DFYICRFQE---PGVAEEDFAQIDTARLIKKFLGGRSPK 183
K + +R + D + + + PG+ + + A D +F G
Sbjct: 151 AVGLSPGKGFESWRDFVANSPDLDVGKLMQRAIPGITDAEVAAYDAPFPGPEFKAGVRRF 210
Query: 184 PPCVP 188
P VP
Sbjct: 211 PAIVP 215
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 7 TTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
T VA +G ++ G+G VLF HG+ W Q+ YLSSRGYR IA D RG+G +D
Sbjct: 2 TFVAKDGTQIYFKDWGSGKPVLFSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD 61
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKALVNLS 125
P + Y +++V LVG G +A Y RV LV L
Sbjct: 62 QPWTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 119
Query: 126 VV 127
V
Sbjct: 120 AV 121
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 7 TTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
T VA +G ++ G+G VLF HG+ W Q+ YLSSRGYR IA D RG+G +D
Sbjct: 2 TFVAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD 61
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKALVNLS 125
P + Y +++V LVG G +A Y RV LV L
Sbjct: 62 QPWTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 119
Query: 126 VV 127
V
Sbjct: 120 AV 121
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 7 TTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66
T VA +G ++ G+G VLF HG+ W Q+ YLSSRGYR IA D RG+G +D
Sbjct: 2 TFVAKDGTQIYFKDWGSGKPVLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSD 61
Query: 67 APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKALVNLS 125
P + Y +++V LVG G +A Y RV LV L
Sbjct: 62 QPWTGNDYDTF--ADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLG 119
Query: 126 VV 127
V
Sbjct: 120 AV 121
>pdb|1BEE|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr
pdb|1BEZ|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr At Ph 5
Length = 310
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 13 GINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP 69
G+ H G A L LHG P Y +RK + + G R IAPD G+G +D P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
YT + + LV DWG + + P R K L+ ++
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLM 152
Query: 130 SRNPATKPV 138
+ +P T+P
Sbjct: 153 T-DPVTQPA 160
>pdb|1EDB|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDD|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDE|A Chain A, Refined X-Ray Structures Of Haloalkane Dehalogenase At Ph
6.2 And Ph 8.2 And Implications For The Reaction
Mechanism
pdb|2DHC|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2DHE|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2EDA|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2EDC|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2HAD|A Chain A, Crystal Structure Of Haloalkane Dehalogenase: An Enzyme To
Detoxify Halogenated Alkanes
pdb|2PKY|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
pdb|2YXP|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
Length = 310
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 13 GINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP 69
G+ H G A L LHG P Y +RK + + G R IAPD G+G +D P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
YT + + LV DWG + + P R K L+ ++
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLM 152
Query: 130 SRNPATKPV 138
+ +P T+P
Sbjct: 153 T-DPVTQPA 160
>pdb|1CIJ|A Chain A, Haloalkane Dehalogenase Soaked With High Concentration Of
Bromide
pdb|1BE0|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Acetic Acid
Length = 310
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 13 GINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP 69
G+ H G A L LHG P Y +RK + + G R IAPD G+G +D P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
YT + + LV DWG + + P R K L+ ++
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLM 152
Query: 130 SRNPATKPV 138
+ +P T+P
Sbjct: 153 T-DPVTQPA 160
>pdb|1HDE|A Chain A, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
pdb|1HDE|B Chain B, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
Length = 310
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 13 GINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP 69
G+ H G A L LHG P Y +RK + + G R IAPD G+G +D P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
YT + + LV DWG + + P R K L+ ++
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLM 152
Query: 130 SRNPATKPV 138
+ +P T+P
Sbjct: 153 T-DPVTQPA 160
>pdb|1B6G|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Chloride
Length = 310
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 52/129 (40%), Gaps = 4/129 (3%)
Query: 13 GINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP 69
G+ H G A L LHG P Y +RK + + G R IAPD G+G +D P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
YT + + LV DWG + + P R K L+ ++
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLM 152
Query: 130 SRNPATKPV 138
+ +P T+P
Sbjct: 153 T-DPVTQPA 160
>pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2M|B Chain B, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2N|A Chain A, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|B Chain B, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|E Chain E, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|F Chain F, Crystal Structure Of Dbja (Wild Type Type Ii P21)
Length = 312
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+I+ V + + P VLFLHG P + WR +L L S IAPDL G+
Sbjct: 8 EIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRN-ILPLVSPVAHCIAPDLIGF 66
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
G + P +Y + G+ +LV DWG +A++ RPD V+ L
Sbjct: 67 GQSGKPD--IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLA 124
Query: 123 NLSVV 127
+ +
Sbjct: 125 FMEFI 129
>pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|A Chain A, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|B Chain B, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|F Chain F, Crystal Structure Of Dbja (His-Dbja)
Length = 316
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+I+ V + + P VLFLHG P + WR +L L S IAPDL G+
Sbjct: 8 EIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRN-ILPLVSPVAHCIAPDLIGF 66
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
G + P +Y + G+ +LV DWG +A++ RPD V+ L
Sbjct: 67 GQSGKPD--IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLA 124
Query: 123 NLSVV 127
+ +
Sbjct: 125 FMEFI 129
>pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta)
pdb|3A2L|B Chain B, Crystal Structure Of Dbja (Mutant Dbja Delta)
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+I+ V + + P VLFLHG P + WR +L L S IAPDL G+
Sbjct: 8 EIRRAPVLGSSMAYRETGAQDAPVVLFLHGNPTSSHIWRN-ILPLVSPVAHCIAPDLIGF 66
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
G + P +Y + G+ +LV DWG +A++ RPD V+ L
Sbjct: 67 GQSGKPD--IAYRFFDHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLA 124
Query: 123 NLSVV 127
+ +
Sbjct: 125 FMEFI 129
>pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
pdb|3R41|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---TSYTALH 78
G GP +L LHGFP+ W + L+ R ++ I DL GYG +D P S T YT
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127
+ G L GHD GA +++ L P R+ L L ++
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLDIL 138
>pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3Z|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---TSYTALH 78
G GP +L LHGFP+ W + L+ R ++ I DL GYG +D P S T YT
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127
+ G L GHD GA +++ L P R+ L L ++
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLDIL 138
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+G+ +H G GP V+ +HGF + WY W + + L+ R + IAPDL G G ++ P
Sbjct: 17 VDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK- 74
Query: 71 ITSYTALHXXXXXXXXXXEFGIEQVF-LVGHDWG 103
T Y+ +F ++ F LV HD G
Sbjct: 75 -TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIG 107
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+G+ +H G GP V+ +HGF + WY W + + L+ R + IAPDL G G ++ P
Sbjct: 17 VDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK- 74
Query: 71 ITSYTALHXXXXXXXXXXEFGIEQVF-LVGHDWG 103
T Y+ +F ++ F LV HD G
Sbjct: 75 -TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIG 107
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+G+ +H G GP V+ +HGF + WY W + + L+ R + IAPDL G G ++ P
Sbjct: 17 VDGVKLHYVKGGQGPLVMLVHGFGQTWYEWHQLMPELAKR-FTVIAPDLPGLGQSEPPK- 74
Query: 71 ITSYTALHXXXXXXXXXXEFGIEQVF-LVGHDWG 103
T Y+ +F ++ F LV HD G
Sbjct: 75 -TGYSGEQVAVYLHKLARQFSPDRPFDLVAHDIG 107
>pdb|2DHD|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
Length = 310
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 4/129 (3%)
Query: 13 GINMHVASIGTGPA---VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP 69
G+ H G A L LHG P Y +RK + + G R IAPD G+G +D P
Sbjct: 33 GLRAHYLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPV 92
Query: 70 SITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
YT + + LV WG + + P R K L+ ++
Sbjct: 93 DEEDYTFEFHRNFLLALIERLDLRNITLVVQXWGGFLGLTLPMADPSRFKRLIIMNACLM 152
Query: 130 SRNPATKPV 138
+ +P T+P
Sbjct: 153 T-DPVTQPA 160
>pdb|3R3V|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3V|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnFLUOROACETATE
pdb|3R3W|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3W|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnCHLOROACETATE
pdb|3R3X|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R3X|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnBROMOACETATE
pdb|3R40|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
pdb|3R40|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - Asp110asnAPO
Length = 306
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---TSYTALH 78
G GP +L LHGFP+ W + L+ R ++ I DL GYG +D P S T YT
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127
+ G L GH+ GA +++ L P R+ L L ++
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138
>pdb|2PSD|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSE|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+ K V + IN + + AV+FLHG Y WR + ++ R I PDL G
Sbjct: 22 RCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGM 80
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGI-EQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
G + + SY L + +++ VGHDWGA +A+++ DR+KA+
Sbjct: 81 GKSGKSGN-GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAI 139
Query: 122 VNLSVV 127
V++ V
Sbjct: 140 VHMESV 145
>pdb|2PSF|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSF|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 310
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+ K V + IN + + AV+FLHG Y WR + ++ R I PDL G
Sbjct: 22 RCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGM 80
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGI-EQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
G + + SY L + +++ VGHDWGA +A+++ DR+KA+
Sbjct: 81 GKSGKSGN-GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAI 139
Query: 122 VNLSVV 127
V++ V
Sbjct: 140 VHMESV 145
>pdb|2PSJ|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSJ|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+ K V + IN + + AV+FLHG Y WR + ++ R I PDL G
Sbjct: 23 RCKQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGM 81
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGI-EQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
G + + SY L + +++ VGHDWGA +A+++ DR+KA+
Sbjct: 82 GKSGKSGN-GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAI 140
Query: 122 VNLSVV 127
V++ V
Sbjct: 141 VHMESV 146
>pdb|1MJ5|A Chain A, Linb (Haloalkane Dehalogenase) From Sphingomonas
Paucimobilis Ut26 At Atomic Resolution
Length = 302
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 9 VATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD-- 66
+ G M GTG +LF HG P Y WR + + + G R IA DL G GD+D
Sbjct: 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 72
Query: 67 --APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124
+ P +Y + G ++V LV HDWG+ + + + +RV+ + +
Sbjct: 73 DPSGPERYAYAEHRDYLDALWEALDLG-DRVVLVVHDWGSALGFDWARRHRERVQGIAYM 131
Query: 125 SVVFRSRNPATKPVDQYRALF-------GDDFYICR--FQE---PGVAEEDFAQIDTARL 172
+ A P +Q R LF G++ + F E PG+ ++ + A
Sbjct: 132 EAIAMPIEWADFP-EQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAY 190
Query: 173 IKKFLGGRSPKPPCV--PKEIGFRGLPD-----LRTLPSWLSEEDV 211
+ FL + P + P++I G P R WLSE +
Sbjct: 191 REPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236
>pdb|1CV2|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.6 A Resolution
pdb|1D07|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 With 1,3-Propanediol, A Product Of
Debromidation Of Dibrompropane, At 2.0a Resolution
pdb|2BFN|A Chain A, The Crystal Structure Of The Complex Of The Haloalkane
Dehalogenase Linb With The Product Of Dehalogenation
Reaction 1,2-Dichloropropane
Length = 296
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 9 VATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD-- 66
+ G M GTG +LF HG P Y WR + + + G R IA DL G GD+D
Sbjct: 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 72
Query: 67 --APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124
+ P +Y + G ++V LV HDWG+ + + + +RV+ + +
Sbjct: 73 DPSGPERYAYAEHRDYLDALWEALDLG-DRVVLVVHDWGSALGFDWARRHRERVQGIAYM 131
Query: 125 SVVFRSRNPATKPVDQYRALF-------GDDFYICR--FQE---PGVAEEDFAQIDTARL 172
+ A P +Q R LF G++ + F E PG+ ++ + A
Sbjct: 132 EAIAMPIEWADFP-EQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAY 190
Query: 173 IKKFLGGRSPKPPCV--PKEIGFRGLPD-----LRTLPSWLSEEDV 211
+ FL + P + P++I G P R WLSE +
Sbjct: 191 REPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236
>pdb|1IZ7|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26 At
1.6 A Resolution
pdb|1IZ8|A Chain A, Re-Refinement Of The Structure Of Hydrolytic Haloalkane
Dehalogenase Linb From Sphingomonas Paucimobilis Ut26
With 1,3-Propanediol, A Product Of Debromidation Of
Dibrompropane, At 2.0a Resolution
pdb|1K5P|A Chain A, Hydrolytic Haloalkane Dehalogenase Linb From Sphingomonas
Paucimobilis Ut26 At 1.8a Resolution
pdb|1K63|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis With Ut26
2-Bromo-2-Propene-1-Ol At 1.8a Resolution
pdb|1K6E|A Chain A, Complex Of Hydrolytic Haloalkane Dehalogenase Linb From
Sphingomonas Paucimobilis Ut26 With 1,2-Propanediol
(Product Of Dehalogenation Of 1,2-Dibromopropane) At
1.85a
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 9 VATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD-- 66
+ G M GTG +LF HG P Y WR + + + G R IA DL G GD+D
Sbjct: 13 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 71
Query: 67 --APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124
+ P +Y + G ++V LV HDWG+ + + + +RV+ + +
Sbjct: 72 DPSGPERYAYAEHRDYLDALWEALDLG-DRVVLVVHDWGSALGFDWARRHRERVQGIAYM 130
Query: 125 SVVFRSRNPATKPVDQYRALF-------GDDFYICR--FQE---PGVAEEDFAQIDTARL 172
+ A P +Q R LF G++ + F E PG+ ++ + A
Sbjct: 131 EAIAMPIEWADFP-EQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAY 189
Query: 173 IKKFLGGRSPKPPCV--PKEIGFRGLPD-----LRTLPSWLSEEDV 211
+ FL + P + P++I G P R WLSE +
Sbjct: 190 REPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 235
>pdb|3R3Y|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
pdb|3R3Y|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnFLUOROACETATE
Length = 306
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---TSYTALH 78
G GP +L LHGFP+ W + L+ R ++ I DL GYG +D P S T YT
Sbjct: 31 GDGPPLLLLHGFPQTHVMWHRVAPKLAER-FKVIVADLPGYGWSDMPESDEQHTPYTKRA 89
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127
+ G L GH GA +++ L P R+ L L ++
Sbjct: 90 MAKQLIEAMEQLGHVHFALAGHXRGARVSYRLALDSPGRLSKLAVLDIL 138
>pdb|1G5F|A Chain A, Structure Of Linb Complexed With 1,2-Dichloroethane
pdb|1G4H|A Chain A, Linb Complexed With Butan-1-Ol
pdb|1G42|A Chain A, Structure Of 1,3,4,6-Tetrachloro-1,4-Cyclohexadiene
Hydrolase (Linb) From Sphingomonas Paucimobilis
Complexed With 1,2-Dichloropropane
Length = 296
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 93/226 (41%), Gaps = 26/226 (11%)
Query: 9 VATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD-- 66
+ G M GTG +LF HG P Y WR + + + G R IA DL G GD+D
Sbjct: 14 IEIKGRRMAYIDEGTGDPILFQHGNPTSSYLWRNIMPHCAGLG-RLIACDLIGMGDSDKL 72
Query: 67 --APPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124
+ P +Y + G ++V LV HDWG+ + + + +RV+ + +
Sbjct: 73 DPSGPERYAYAEHRDYLDALWEALDLG-DRVVLVVHDWGSALGFDWARRHRERVQGIAYM 131
Query: 125 SVVFRSRNPATKPVDQYRALF-------GDDFYICR--FQE---PGVAEEDFAQIDTARL 172
+ A P +Q R LF G++ + F E PG+ ++ + A
Sbjct: 132 EAIAMPIEWADFP-EQDRDLFQAFRSQAGEELVLQDNVFVEQVLPGLILRPLSEAEMAAY 190
Query: 173 IKKFLGGRSPKPPCV--PKEIGFRGLPD-----LRTLPSWLSEEDV 211
+ FL + P + P++I G P R WLSE +
Sbjct: 191 REPFLAAGEARRPTLSWPRQIPIAGTPADVVAIARDYAGWLSESPI 236
>pdb|2PSH|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSH|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 3/126 (2%)
Query: 3 KIKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62
+ V + IN + + AV+FLHG Y WR + ++ R I PDL G
Sbjct: 23 RCAQMNVLDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVA-RCIIPDLIGM 81
Query: 63 GDTDAPPSITSYTALHXXXXXXXXXXEFGI-EQVFLVGHDWGALIAWYFCLLRPDRVKAL 121
G + + SY L + +++ VGHDWGA +A+++ DR+KA+
Sbjct: 82 GKSGKSGN-GSYRLLDHYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAI 140
Query: 122 VNLSVV 127
V++ V
Sbjct: 141 VHMESV 146
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 22/162 (13%)
Query: 7 TTVATNGINMHVASIG--TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGD 64
T ++G N+ G G V+F HG+P W Q+L+ S GYR IA D RG+G
Sbjct: 2 TVTTSDGTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGR 61
Query: 65 TDAPPS---ITSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKA 120
+D P + + +Y A + +GH G +A Y P RV
Sbjct: 62 SDQPSTGHDMDTYAA-----DVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAK 116
Query: 121 LVNLS-----VVFRSRNPATKPV---DQYRALFGDD---FYI 151
V +S +V NP P+ D++RA + FYI
Sbjct: 117 AVLVSAVPPVMVKSDTNPDGLPLEVFDEFRAALAANRAQFYI 158
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 7 TTVAT-NGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDT 65
TT T +G ++ G+G ++F HG+P SW Q+++L+++GYR IA D RG+G +
Sbjct: 1 TTFTTRDGTQIYYKDWGSGQPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRS 60
Query: 66 DAP 68
P
Sbjct: 61 SQP 63
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+ I+++ GTG V+ +HGFP +SW +Q L GYR I D RG+G + P +
Sbjct: 11 STSIDLYYEDHGTGVPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 70
Query: 71 ITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGA-LIAWYFCLLRPDRVKALVNLS 125
Y + ++ LVG G +A Y R+ A+ L+
Sbjct: 71 GYDYDTFAADLNTVLETLD--LQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLA 124
>pdb|2QVB|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
pdb|2QVB|B Chain B, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis
Length = 297
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 13 GINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD----AP 68
G M G G A++F HG P Y WR + +L G R +A DL G G +D +
Sbjct: 17 GKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASDKLSPSG 75
Query: 69 PSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128
P SY + G + V LV HDWG+ + + + DRV+ + + +
Sbjct: 76 PDRYSYGEQRDFLFALWDALDLG-DHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV 134
Query: 129 RSRN-----PATKPVDQ-YRALFGD------DFYICRFQEPGVAEEDFAQIDTARLIKKF 176
PA + V Q +R+ G+ + ++ R PG + + + F
Sbjct: 135 TPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVL-PGAILRQLSDEEMNHYRRPF 193
Query: 177 LGGRSPKPPCV--PKEIGFRGLPD-----LRTLPSWLSEEDV 211
+ G + P + P+ + G P + SWL E D+
Sbjct: 194 VNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 235
>pdb|2O2H|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With
1,2-Dichloroethane
pdb|2O2I|A Chain A, Crystal Structure Of Haloalkane Dehalogenase Rv2579 From
Mycobacterium Tuberculosis Complexed With 1,3-Propandiol
Length = 300
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 26/222 (11%)
Query: 13 GINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD----AP 68
G M G G A++F HG P Y WR + +L G R +A DL G G +D +
Sbjct: 19 GKRMAYIDEGKGDAIVFQHGNPTSSYLWRNIMPHLEGLG-RLVACDLIGMGASDKLSPSG 77
Query: 69 PSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128
P SY + G + V LV HDWG+ + + + DRV+ + + +
Sbjct: 78 PDRYSYGEQRDFLFALWDALDLG-DHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIV 136
Query: 129 RSRN-----PATKPVDQ-YRALFGD------DFYICRFQEPGVAEEDFAQIDTARLIKKF 176
PA + V Q +R+ G+ + ++ R PG + + + F
Sbjct: 137 TPMTWADWPPAVRGVFQGFRSPQGEPMALEHNIFVERVL-PGAILRQLSDEEMNHYRRPF 195
Query: 177 LGGRSPKPPCV--PKEIGFRGLPD-----LRTLPSWLSEEDV 211
+ G + P + P+ + G P + SWL E D+
Sbjct: 196 VNGGEDRRPTLSWPRNLPIDGEPAEVVALVNEYRSWLEETDM 237
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+ I+++ GTG V+ +HGFP +SW +Q L GYR I D RG+G + P +
Sbjct: 10 STSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 69
Query: 71 ITSY 74
Y
Sbjct: 70 GYDY 73
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+ I+++ GTG V+ +HGFP +SW +Q L GYR I D RG+G + P +
Sbjct: 10 STSIDLYYEDHGTGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 69
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 11 TNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
+ I+++ G G V+ +HGFP +SW +Q L GYR I D RG+G + P +
Sbjct: 10 STSIDLYYEDHGAGQPVVLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT 69
Query: 71 ITSY 74
Y
Sbjct: 70 GYDY 73
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS 73
I ++ G+G V+ +HG+P +SW +Q L ++GYR I D RG+G + +
Sbjct: 13 IELYYEDQGSGQPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYD 72
Query: 74 YTALHXXXXXXXXXXEFGIEQVFLVGHDWG-ALIAWYFCLLRPDRVKALVNLS-----VV 127
Y + + V LVG G +A Y +RV L L+ +V
Sbjct: 73 YDTFAADLHTVLETLD--LRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLV 130
Query: 128 FRSRNPATKP 137
R NP P
Sbjct: 131 QRDDNPEGVP 140
>pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|B Chain B, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|C Chain C, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|D Chain D, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|E Chain E, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|F Chain F, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|G Chain G, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|H Chain H, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|I Chain I, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|J Chain J, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|K Chain K, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|L Chain L, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
Length = 314
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS 73
I ++V G+GP LF HG + + LS R + IA D RG+G +D P T
Sbjct: 58 ITLNVREKGSGPLXLFFHGITSNSAVFEPLXIRLSDR-FTTIAVDQRGHGLSDKPE--TG 114
Query: 74 YTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124
Y A LVGH GA + PD V+++V +
Sbjct: 115 YEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAI 165
>pdb|1A8Q|A Chain A, Bromoperoxidase A1
Length = 274
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 12 NGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
+G+ + G G V+F+HG+P +W+ QL + GYR IA D RG+G + P
Sbjct: 7 DGVEIFYKDWGQGRPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHS--TPVW 64
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDW-GALIAWYFCLLRPDRVKALVNLS----V 126
Y + + V LV H G +A Y R+++ V LS V
Sbjct: 65 DGYDFDTFADDLNDLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPV 124
Query: 127 VFRS-RNPATKPVDQYRAL 144
+ +S +NP P + + AL
Sbjct: 125 MIKSDKNPDGVPDEVFDAL 143
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 8 TVATNGINMHVASIGTGPAVLFLHGFP---ELWYSWRKQLLYLSSRGYRAIAPDLRGYGD 64
++ G+ + +G G V+ +HG + +WR + LS + YR IAPD+ G+G
Sbjct: 9 SILAAGVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGF 67
Query: 65 TDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124
TD P + +Y+ IE+ +VG+ +G +A L +RV +V +
Sbjct: 68 TDRPENY-NYSKDSWVDHIIGIMDALEIEKAHIVGNSFGGGLAIATALRYSERVDRMVLM 126
Query: 125 SVV 127
V
Sbjct: 127 GAV 129
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXX 84
P + F HG+P W QLL+ + GYR +A D RG+G + + H
Sbjct: 23 PVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQ--VWDGHDMDHYADDVA 80
Query: 85 XXXXEFGIEQVFLVGHD-WGALIAWYFCLLRPDRVKALVNLSVV 127
GI+ VGH G + Y D+V V ++ V
Sbjct: 81 AVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAP 68
I ++ GTG V+ +HG+P SW Q+ L GYR I D RG+G + P
Sbjct: 17 IEIYYEDHGTGKPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQP 71
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXX 81
G +L HG +W + + L+ GYR IA D G+ + + P+ Y+
Sbjct: 44 ANGRTILLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKS-SKPAHYQYSFQQLAA 102
Query: 82 XXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
G+ + ++GH G +A + LL P +V+ LV
Sbjct: 103 NTHALLERLGVARASVIGHSXGGXLATRYALLYPRQVERLV 143
>pdb|1IUN|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUN|B Chain B, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Hexagonal
pdb|1IUO|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Acetates
pdb|1IUP|A Chain A, Meta-Cleavage Product Hydrolase From Pseudomonas
Fluorescens Ip01 (Cumd) S103a Mutant Complexed With
Isobutyrates
pdb|1UK6|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Propionate
pdb|1UK7|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With N-Butyrate
pdb|1UK8|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With N-valerate
pdb|1UK9|A Chain A, Crystal Structure Of A Meta-cleavage Product Hydrolase
(cumd) Complexed With Isovalerate
pdb|1UKA|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With (S)-2-Methylbutyrate
pdb|1UKB|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) Complexed With Benzoate
Length = 282
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 8 TVATNGINMHVASIGTGPAVLFLHGFP---ELWYSWRKQLLYLSSRGYRAIAPDLRGYGD 64
++ G+ + +G G V+ +HG + +WR + LS + YR IAPD+ G+G
Sbjct: 9 SILAAGVLTNYHDVGEGQPVILIHGSGPGVSAYANWRLTIPALS-KFYRVIAPDMVGFGF 67
Query: 65 TDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
TD P + +Y+ IE+ +VG+ +G +A L +RV +V
Sbjct: 68 TDRPENY-NYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMV 124
>pdb|1QTR|A Chain A, Crystal Structure Analysis Of The Prolyl Aminopeptidase
From Serratia Marcescens
pdb|1WM1|A Chain A, Crystal Structure Of Prolyl Aminopeptidase, Complex With
Pro-tboda
pdb|1X2B|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Sar-Tboda
pdb|1X2E|A Chain A, The Crystal Structure Of Prolyl Aminopeptidase Complexed
With Ala-Tboda
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXX 82
G +F+HG P S + L+ R Y+ + D RG G + S+ + T H
Sbjct: 36 NGKPAVFIHGGPGGGISPHHRQLFDPER-YKVLLFDQRGCGRSRPHASLDNNTTWHLVAD 94
Query: 83 XXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
G+EQ + G WG+ +A + P+RV +V
Sbjct: 95 IERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMV 134
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 15 NMHVASIGTGPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
N+H G G V+ LHG W ++ + + GYR I D G+ +DA +
Sbjct: 24 NIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV-VM 82
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
L I++ LVG+ G A F L PDR+ L+
Sbjct: 83 DEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLI 133
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 15 NMHVASIGTGPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
N+H G G V+ LHG W ++ + + GYR I D G+ +DA +
Sbjct: 24 NIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV-VM 82
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
L I++ LVG+ G A F L PDR+ L+
Sbjct: 83 DEQRGLVNARAVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLI 133
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 15 NMHVASIGTGPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
N+H G G V+ LHG W ++ + + GYR I D G+ +DA +
Sbjct: 21 NIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV-VM 79
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
L I++ LVG+ G A F L PDR+ L+
Sbjct: 80 DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 130
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 15 NMHVASIGTGPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
N+H G G V+ LHG W ++ + + GYR I D G+ +DA +
Sbjct: 24 NIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV-VM 82
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
L I++ LVG+ G A F L PDR+ L+
Sbjct: 83 DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 133
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 15 NMHVASIGTGPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
N+H G G V+ LHG W ++ + + GYR I D G+ +DA +
Sbjct: 24 NIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV-VM 82
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
L I++ LVG+ G A F L PDR+ L+
Sbjct: 83 DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 133
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Query: 15 NMHVASIGTGPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
N+H G G V+ LHG W ++ + + GYR I D G+ +DA +
Sbjct: 24 NIHYNEAGNGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAV-VM 82
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
L I++ LVG+ G A F L PDR+ L+
Sbjct: 83 DEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLI 133
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 12/147 (8%)
Query: 8 TVATNGINMHVASIGTGPAVLFLHGF---PELWYSWRKQLLYLSSRGYRAIAPDLRGYGD 64
T+A++ + VA PAV+ LHG +WR + L+ + +APDL G+G
Sbjct: 16 TLASHAL---VAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAE-NFFVVAPDLIGFGQ 71
Query: 65 TDAPPS----ITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKA 120
++ P + I S+ + FGIE+ +VG+ G + + P+R
Sbjct: 72 SEYPETYPGHIMSWVGMRVEQILGLMN-HFGIEKSHIVGNSMGGAVTLQLVVEAPERFDK 130
Query: 121 LVNLSVVFRSRNPATKPVDQYRALFGD 147
+ + V N + + A + D
Sbjct: 131 VALMGSVGAPMNARPPELARLLAFYAD 157
>pdb|3P2M|A Chain A, Crystal Structure Of A Novel Esterase Rv0045c From
Mycobacterium Tuberculosis
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYG------DTDAPPSITSYT 75
G+ P V+FLHG + ++W ++ L G A+A DL G+G D + P + S T
Sbjct: 79 GSAPRVIFLHGGGQNAHTWDTVIVGL---GEPALAVDLPGHGHSAWREDGNYSPQLNSET 135
Query: 76 ALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127
E F+VG G L A + PD V LV + V
Sbjct: 136 -------LAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVT 180
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
+ F HG+P W QLL+ ++G+R +A D RG+G + + H
Sbjct: 29 IHFHHGWPLSSDDWDAQLLFFVNKGFRVVAHDRRGHGRSSQ--VWDGHDMDHYADDAAAV 86
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDR--VKALVNLSV----VFRSRNPATKPVDQ 140
+ G VGH G + +R KA++ SV V S NP P
Sbjct: 87 VEKLGTHGAMHVGHSTGGGEVVRYIARHGERNVSKAVLISSVPPLMVKTSSNPNGTP--- 143
Query: 141 YRALFGDDF 149
+++F DDF
Sbjct: 144 -KSVF-DDF 150
>pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3E3A|B Chain B, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3HSS|A Chain A, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HSS|B Chain B, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HYS|A Chain A, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HYS|B Chain B, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HZO|A Chain A, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
pdb|3HZO|B Chain B, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
Length = 293
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWR-KQLLYLSSRGYRAIAPDLRGYGDTDAPPSIT 72
IN+ GTG V+F+ G +W Q+ + GYR I D RG G T+ T
Sbjct: 33 INLAYDDNGTGDPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATENAEGFT 92
Query: 73 SYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
+ T + I +VG GA IA ++ P+ V + V ++ R
Sbjct: 93 TQTMV---ADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGR 146
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)
Query: 10 ATNGINMHVASIGTG-PAVLFLHGF---PELWYSWRKQLLYLSSRGYRAIAPDLRGYGDT 65
A + +H G G V+ LHG W ++ + + L GYR I D G+G +
Sbjct: 21 AGKTLRIHFNDCGQGDETVVLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKS 80
Query: 66 DAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
D+ + S + L+ + I ++ L+G+ G + F L P+RV LV
Sbjct: 81 DSVVNSGSRSDLN-ARILKSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPERVGKLV 136
>pdb|1XQV|A Chain A, Crystal Structure Of Inactive F1-Mutant G37a
Length = 293
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
++ +HG P + + + L ++ G + D G G ++ P
Sbjct: 31 LMTMHGAPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALR 90
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRA 143
FG E+VFL+G +G +A + + D +K L+ LS V + + +D+ A
Sbjct: 91 SKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150
Query: 144 LFGD 147
+ D
Sbjct: 151 KYRD 154
>pdb|1XRL|A Chain A, Crystal Structure Of Active Site F1-Mutant Y205f Complex
With Inhibitor Pck
Length = 293
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
++ +HG P + + + L ++ G + D G G ++ P
Sbjct: 31 LMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALR 90
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRA 143
FG E+VFL+G +G +A + + D +K L+ LS V + + +D+ A
Sbjct: 91 SKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150
Query: 144 LFGD 147
+ D
Sbjct: 151 KYRD 154
>pdb|4IH4|A Chain A, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|B Chain B, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|C Chain C, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
pdb|4IH4|D Chain D, Crystal Structure Of Arabidopsis Dwarf14 Orthologue, Atd14
Length = 267
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 16 MHVASIGTGPAVLFL-HGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP-SITS 73
++V +GTG +LFL HGF +W L Y + + YR + DL G +
Sbjct: 10 LNVRVVGTGDRILFLAHGFGTDQSAWHLILPYFT-QNYRVVLYDLVCAGSVNPDYFDFNR 68
Query: 74 YTALHXXXXXXXXXXE-FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
YT L + GI+ VGH A+I + RP+ L+
Sbjct: 69 YTTLDPYVDDLLNIVDSLGIQNCAYVGHSVSAMIGIIASIRRPELFSKLI 118
>pdb|1XRM|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Ala-Phe
pdb|1XRN|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Phe-Ala
pdb|1XRO|A Chain A, Crystal Structure Of Active Site F1-Mutant E213q Soaked
With Peptide Phe-Leu
pdb|1XRP|A Chain A, Crystal Structure Of Active Site F1-mutant E213q Soaked
With Peptide Pro-leu-gly-gly
Length = 293
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
++ +HG P + + + L ++ G + D G G ++ P
Sbjct: 31 LMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALR 90
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRA 143
FG E+VFL+G +G +A + + D +K L+ LS V + + +D+ A
Sbjct: 91 SKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150
Query: 144 LFGD 147
+ D
Sbjct: 151 KYRD 154
>pdb|1XRQ|A Chain A, Crystal Structure Of Active Site F1-Mutant E245q Soaked
With Peptide Phe-Leu
pdb|1XRR|A Chain A, Crystal Structure Of Active Site F1-mutant E245q Soaked
With Peptide Pro-pro
Length = 293
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
++ +HG P + + + L ++ G + D G G ++ P
Sbjct: 31 LMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALR 90
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRA 143
FG E+VFL+G +G +A + + D +K L+ LS V + + +D+ A
Sbjct: 91 SKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150
Query: 144 LFGD 147
+ D
Sbjct: 151 KYRD 154
>pdb|1MTZ|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1
pdb|1MU0|A Chain A, Crystal Structure Of The Tricorn Interacting Factor F1
Complex With Pck
Length = 293
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
++ +HG P + + + L ++ G + D G G ++ P
Sbjct: 31 LMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALR 90
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRA 143
FG E+VFL+G +G +A + + D +K L+ LS V + + +D+ A
Sbjct: 91 SKLFGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150
Query: 144 LFGD 147
+ D
Sbjct: 151 KYRD 154
>pdb|4HRX|A Chain A, Crystal Structure Of Kai2
pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2
pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein
In Arabidopsis Thaliana
Length = 288
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 17 HVASIGTGPAVLFL-HGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP-SITSY 74
+V IG+G A + L HGF W+ + +L YR + D G G T+ Y
Sbjct: 27 NVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVD-DYRVVLYDNMGAGTTNPDYFDFDRY 85
Query: 75 TALHXXXXXXXXXXE-FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRN 132
+ L E IE VGH A+I L RPD +V +S R N
Sbjct: 86 SNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASPRYVN 144
>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
(atd14l)
Length = 272
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 17 HVASIGTGPAVLFL-HGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP-SITSY 74
+V IG+G A + L HGF W+ + +L YR + D G G T+ Y
Sbjct: 11 NVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRY 69
Query: 75 TALHXXXXXXXXXXE-FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRN 132
+ L E IE VGH A+I L RPD +V +S R N
Sbjct: 70 SNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASPRYVN 128
>pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From
Arabidopsis Thaliana
Length = 270
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 17 HVASIGTGPAVLFL-HGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP-SITSY 74
+V IG+G A + L HGF W+ + +L YR + D G G T+ Y
Sbjct: 9 NVKVIGSGEATIVLGHGFGTDQSVWKHLVPHLVD-DYRVVLYDNMGAGTTNPDYFDFDRY 67
Query: 75 TALHXXXXXXXXXXE-FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRN 132
+ L E IE VGH A+I L RPD +V +S R N
Sbjct: 68 SNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNRPDLFSKIVMISASPRYVN 126
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRK--QLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
++ H A +G V+ LHG SW + + + +R + +A D GYG +D
Sbjct: 46 LHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEH 105
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
+ + + G+ +V LVG+ G A F L P R LV
Sbjct: 106 GQFNR-YAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLV 155
>pdb|1XQW|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Phe-Leu
pdb|1XQX|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Pck
pdb|1XQY|A Chain A, Crystal Structure Of F1-Mutant S105a Complex With Pro-Leu-
Gly-Gly
Length = 293
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)
Query: 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXX 86
++ +HG P + + + L ++ G + D G G ++ P
Sbjct: 31 LMTMHGGPGMSHDYLLSLRDMTKEGITVLFYDQFGCGRSEEPDQSKFTIDYGVEEAEALR 90
Query: 87 XXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRA 143
FG E+VFL+G +G +A + + D +K L+ LS V + + +D+ A
Sbjct: 91 SKLFGNEKVFLMGSAYGGALALAYAVKYQDHLKGLIVSGGLSSVPLTVKEMNRLIDELPA 150
Query: 144 LFGD 147
+ D
Sbjct: 151 KYRD 154
>pdb|3FSG|A Chain A, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
pdb|3FSG|B Chain B, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
pdb|3FSG|C Chain C, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
Length = 272
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 15 NMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRG-YRAIAPDLRGYGDTDAPPSITS 73
N+ SIG+G ++FLHG S LS+ G Y+ I DL G G++D TS
Sbjct: 12 NISYFSIGSGTPIIFLHGLSLDKQSTXLFFEPLSNVGQYQRIYLDLPGXGNSDPISPSTS 71
Query: 74 YTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRV 118
L G + L GH +G +A D+
Sbjct: 72 DNVLETLIEAIEEI--IGARRFILYGHSYGGYLAQAIAFHLKDQT 114
>pdb|3FSG|D Chain D, Crystal Structure Of AlphaBETA SUPERFAMILY HYDROLASE FROM
OENOCOCCUS Oeni Psu-1
Length = 272
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 15 NMHVASIGTGPAVLFLHGFPELWYSWRKQLLY---LSSRG-YRAIAPDLRGYGDTDAPPS 70
N+ SIG+G ++FLHG L + L+ LS+ G Y+ I DL G G++D
Sbjct: 12 NISYFSIGSGTPIIFLHG---LSLDKQSTCLFFEPLSNVGQYQRIYLDLPGXGNSDPISP 68
Query: 71 ITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRV 118
TS L G + L GH +G +A D+
Sbjct: 69 STSDNVLETLIEAIEEI--IGARRFILYGHSYGGYLAQAIAFHLKDQT 114
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 14 INMHVASIGTGPAVLFLHGFPELWYSWRK--QLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71
++ H A +G V+ LHG SW + + + +R + +A D GYG +D
Sbjct: 26 LHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEH 85
Query: 72 TSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
+ + + G+ +V LVG+ G A F L P R LV
Sbjct: 86 GQFNR-YAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLV 135
>pdb|3V48|A Chain A, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
pdb|3V48|B Chain B, Crystal Structure Of The Putative AlphaBETA HYDROLASE RUTD
FROM E.Coli
Length = 268
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 4/103 (3%)
Query: 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS-YTALHXXXX 82
P V+ + G W QL L Y+ + D RG G+ P ++ Y+
Sbjct: 15 APVVVLISGLGGSGSYWLPQLAVLEQE-YQVVCYDQRGTGNN--PDTLAEDYSIAQXAAE 71
Query: 83 XXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLS 125
GIE +VGH GAL+ L P V L++++
Sbjct: 72 LHQALVAAGIEHYAVVGHALGALVGXQLALDYPASVTVLISVN 114
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 4/125 (3%)
Query: 3 KIKHTTVATNGINMHVASIG--TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60
+ K ++T HV + G P ++ LHG W + SS+ YR A D+
Sbjct: 44 RCKSFYISTRFGQTHVIASGPEDAPPLVLLHGALFSSTXWYPNIADWSSK-YRTYAVDII 102
Query: 61 GYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKA 120
G + P +++ T GIE+ +G G L F L P+RVK+
Sbjct: 103 GDKNKSIPENVSG-TRTDYANWLLDVFDNLGIEKSHXIGLSLGGLHTXNFLLRXPERVKS 161
Query: 121 LVNLS 125
LS
Sbjct: 162 AAILS 166
>pdb|1OIL|A Chain A, Structure Of Lipase
pdb|1OIL|B Chain B, Structure Of Lipase
pdb|4LIP|D Chain D, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|4LIP|E Chain E, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|1HQD|A Chain A, Pseudomonas Cepacia Lipase Complexed With Transition State
Analogue Of 1-Phenoxy-2-Acetoxy Butane
pdb|2LIP|A Chain A, Pseudomonas Lipase Open Conformation
pdb|3LIP|A Chain A, Open Conformation Of Pseudomonas Cepacia Lipase
pdb|5LIP|A Chain A, Pseudomonas Lipase Complexed With Rc-(Rp, Sp)-1,2-
Dioctylcarbamoylglycero-3-O-Octylphosphonate
pdb|2NW6|A Chain A, Burkholderia Cepacia Lipase Complexed With S-Inhibitor
Length = 320
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 7/98 (7%)
Query: 32 GFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFG 91
G E WY ++ L RG +L G+ D P G
Sbjct: 25 GVLEYWYGIQEDL---QQRGATVYVANLSGFQSDDGPNG----RGEQLLAYVKTVLAATG 77
Query: 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
+V LVGH G L + Y + PD V ++ + R
Sbjct: 78 ATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115
>pdb|1YS1|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (R)-2-Methyl-3-Phenylpropyl Ester
pdb|1YS2|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (s) 2-methyl-3-phenylpropyl Ester
Length = 320
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 34/98 (34%), Gaps = 7/98 (7%)
Query: 32 GFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFG 91
G E WY ++ L RG +L G+ D P G
Sbjct: 25 GVLEYWYGIQEDL---QQRGATVYVANLSGFQSDDGPNG----RGEQLLAYVKTVLAATG 77
Query: 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129
+V LVGH G L + Y + PD V ++ + R
Sbjct: 78 ATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115
>pdb|4FBL|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|C Chain C, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBL|D Chain D, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 281
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 44/114 (38%)
Query: 20 SIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHX 79
S+G+ VL HGF S R + GY P L G+G T A + ++ +
Sbjct: 47 SVGSRIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTA 106
Query: 80 XXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133
E + +F+ G G + + P+R ++ ++ R +P
Sbjct: 107 DIVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESP 160
>pdb|4G5X|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G5X|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
pdb|4G9E|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
pdb|4G9E|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
Complexed With N-butanoyl Homoserine
Length = 279
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 20 SIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYG-DTDAPPSITSYTALH 78
S G G +L +HG + QL + +R IAPDL G+G TDA SY+
Sbjct: 20 SEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEG 79
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPD 116
+ GI + G G I P+
Sbjct: 80 YADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE 117
>pdb|4G8C|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G8C|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant Complexed With N-hexanoyl Homoserine
pdb|4G9G|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
pdb|4G9G|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
E219g Mutant
Length = 279
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 20 SIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYG-DTDAPPSITSYTALH 78
S G G +L +HG + QL + +R IAPDL G+G TDA SY+
Sbjct: 20 SEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEG 79
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPD 116
+ GI + G G I P+
Sbjct: 80 YADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE 117
>pdb|4FBM|A Chain A, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
pdb|4FBM|B Chain B, Lips And Lipt, Two Metagenome-Derived Lipolytic Enzymes
Increase The Diversity Of Known Lipase And Esterase
Families
Length = 293
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 44/114 (38%)
Query: 20 SIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHX 79
S+G+ VL HGF S R + GY P L G+G T A + ++ +
Sbjct: 45 SVGSRIGVLVSHGFTGSPQSMRFLAEGFARAGYTVATPRLTGHGTTPAEMAASTASDWTA 104
Query: 80 XXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133
E + +F+ G G + + P+R ++ ++ R +P
Sbjct: 105 DIVAAMRWLEERCDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESP 158
>pdb|4G8B|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8B|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant Complexed With N-hexanoyl Homoserine
Lactone
pdb|4G8D|A Chain A, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
pdb|4G8D|B Chain B, Crystal Structures Of N-acyl Homoserine Lactonase Aidh
S102g Mutant
Length = 279
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 20 SIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYG-DTDAPPSITSYTALH 78
S G G +L +HG + QL + +R IAPDL G+G TDA SY+
Sbjct: 20 SEGEGAPLLMIHGNSSSGAIFAPQLEGEIGKKWRVIAPDLPGHGKSTDAIDPDRSYSMEG 79
Query: 79 XXXXXXXXXXEFGIEQVFLVGHDWG 103
+ GI + G WG
Sbjct: 80 YADAMTEVMQQLGIADAVVFG--WG 102
>pdb|3OM8|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas
Aeruginosa Pa01
pdb|3OM8|B Chain B, The Crystal Structure Of A Hydrolase From Pseudomonas
Aeruginosa Pa01
Length = 266
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 38 YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFL 97
+ W QL L+ R +R + D RG+G + PP YT + +
Sbjct: 41 HXWDAQLPALT-RHFRVLRYDARGHGASSVPPG--PYTLARLGEDVLELLDALEVRRAHF 97
Query: 98 VGHDWGALIAWYFCLLRPDRVKALV 122
+G G ++ + L P R++ LV
Sbjct: 98 LGLSLGGIVGQWLALHAPQRIERLV 122
>pdb|1J1I|A Chain A, Crystal Structure Of A His-Tagged Serine Hydrolase
Involved In The Carbazole Degradation (Carc Enzyme)
Length = 296
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 9 VATNGINMHVASIGTGPAVLFLHGFPELWY---SWRKQLLYLSSRGYRAIAPDLRGYGDT 65
V G+ G G V+ +HG +WR + L+ R YR IA D+ G+G T
Sbjct: 21 VNAGGVETRYLEAGKGQPVILIHGGGAGAESEGNWRNVIPILA-RHYRVIAMDMLGFGKT 79
Query: 66 DAPPSITSYTALHXXXXXXXXXXEFGIE-QVFLVGHDWGALIAWYFCLLRPDRVKALV 122
A P I YT + +V +VG+ G +L + V ALV
Sbjct: 80 -AKPDI-EYTQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALV 135
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 26 AVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXX 83
A++F HGF + R+ L ++ D G+GD+D + T L+
Sbjct: 49 AIIF-HGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDG--KFENMTVLNEIEDA 105
Query: 84 XX----XXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLS 125
+ + ++LVGH G ++A L PD +K +V L+
Sbjct: 106 NAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLA 151
>pdb|2OCL|A Chain A, Crystal Structure Of Valacyclovir Hydrolase S122a Mutant
Length = 254
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 4 IKHTTVATNGINMHVASIGTGP-AVLFLHG-FPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
+ VA NG+ +H G G AVL L G + QL L+ + + +A D RG
Sbjct: 2 VTSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRG 61
Query: 62 YGDTDAP 68
YG + P
Sbjct: 62 YGHSRPP 68
>pdb|2OCG|A Chain A, Crystal Structure Of Human Valacyclovir Hydrolase
pdb|2OCI|A Chain A, Crystal Structure Of Valacyclovir Hydrolase Complexed
With A Product Analogue
Length = 254
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 4 IKHTTVATNGINMHVASIGTGP-AVLFLHG-FPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
+ VA NG+ +H G G AVL L G + QL L+ + + +A D RG
Sbjct: 2 VTSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRG 61
Query: 62 YGDTDAP 68
YG + P
Sbjct: 62 YGHSRPP 68
>pdb|2OCK|A Chain A, Crystal Structure Of Valacyclovir Hydrolase D123n Mutant
Length = 254
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 4 IKHTTVATNGINMHVASIGTGP-AVLFLHG-FPELWYSWRKQLLYLSSRGYRAIAPDLRG 61
+ VA NG+ +H G G AVL L G + QL L+ + + +A D RG
Sbjct: 2 VTSAKVAVNGVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRG 61
Query: 62 YGDTDAP 68
YG + P
Sbjct: 62 YGHSRPP 68
>pdb|3FCY|A Chain A, Crystal Structure Of Acetyl Xylan Esterase 1 From
Thermoanaerobacterium Sp. JwSL YS485
pdb|3FCY|B Chain B, Crystal Structure Of Acetyl Xylan Esterase 1 From
Thermoanaerobacterium Sp. JwSL YS485
pdb|3FCY|C Chain C, Crystal Structure Of Acetyl Xylan Esterase 1 From
Thermoanaerobacterium Sp. JwSL YS485
Length = 346
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYG 63
G PA++ HG+ W +L Y+++ G+ +A D+RG G
Sbjct: 106 GKHPALIRFHGYSSNSGDWNDKLNYVAA-GFTVVAMDVRGQG 146
>pdb|2YYS|A Chain A, Crystal Structure Of The Proline Iminopeptidase-Related
Protein Ttha1809 From Thermus Thermophilus Hb8
pdb|2YYS|B Chain B, Crystal Structure Of The Proline Iminopeptidase-Related
Protein Ttha1809 From Thermus Thermophilus Hb8
Length = 286
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 5/109 (4%)
Query: 2 EKIKHTTVATNGINMHVASIG--TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59
E+I + V ++V +G GPA+ LHG P ++ L G+R + D
Sbjct: 3 EEIGYVPVGEA--ELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQ 60
Query: 60 RGYGDT-DAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIA 107
RG G + + P +T G+E+ L+ H +GA++A
Sbjct: 61 RGSGRSLELPQDPRLFTVDALVEDTLLLAEALGVERFGLLAHGFGAVVA 109
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 26 AVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXX 83
A++F HGF + R+ L ++ D G+GD+D + T L+
Sbjct: 49 AIIF-HGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDG--KFENMTVLNEIEDA 105
Query: 84 XX----XXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLS 125
+ + ++LVGH G ++A L PD +K +V L+
Sbjct: 106 NAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLA 151
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 9/106 (8%)
Query: 26 AVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXX 83
A++F HGF + R+ L ++ D G+GD+D + T L+
Sbjct: 49 AIIF-HGFTANRNTSLLREIANSLRDENIASVRFDFNGHGDSDG--KFENMTVLNEIEDA 105
Query: 84 XX----XXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLS 125
+ + ++LVGH G ++A L PD +K +V L+
Sbjct: 106 NAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLA 151
>pdb|1TQH|A Chain A, Covalent Reaction Intermediate Revealed In Crystal
Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est30
Length = 247
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTA 76
AVL LHGF R +L S+GY AP +G+G PP +T
Sbjct: 18 AVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHG---VPPEELVHTG 65
>pdb|1R1D|A Chain A, Structure Of A Carboxylesterase From Bacillus
Stearothermophilus
pdb|1R1D|B Chain B, Structure Of A Carboxylesterase From Bacillus
Stearothermophilus
Length = 247
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTA 76
AVL LHGF R +L S+GY AP +G+G PP +T
Sbjct: 18 AVLLLHGFTGNSADVRXLGRFLESKGYTCHAPIYKGHG---VPPEELVHTG 65
>pdb|1AZW|A Chain A, Proline Iminopeptidase From Xanthomonas Campestris Pv.
Citri
pdb|1AZW|B Chain B, Proline Iminopeptidase From Xanthomonas Campestris Pv.
Citri
Length = 313
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Query: 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXX 83
G V+ LHG P + + + + ++ YR + D RG G + + T
Sbjct: 34 GKPVVMLHGGPGGGCNDKMRRFHDPAK-YRIVLFDQRGSGRSTPHADLVDNTTWDLVADI 92
Query: 84 XXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122
G+++ + G WG+ +A + P +V LV
Sbjct: 93 ERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELV 131
>pdb|1IMJ|A Chain A, Crystal Structure Of The Human Ccg1/tafii250-interacting
Factor B (cib)
Length = 210
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 26 AVLFLHGFPELWYSWRK--QLLYLSSRGYRAIAPDLRGYGDT 65
+VL LHG +W+ L L+ GYRA+A DL G G +
Sbjct: 34 SVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPGLGHS 75
>pdb|3RM3|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257
pdb|3RLI|A Chain A, Crystal Structure Of Monoacylglycerol Lipase From Bacillus
Sp. H257 In Complex With Pmsf
Length = 270
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 12/158 (7%)
Query: 23 TGP-AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXX 81
GP VL +HGF +S R + GY P L+G+G T++
Sbjct: 38 NGPVGVLLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASV 97
Query: 82 XXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPD-----RVKALVNLSVVFRSRNPATK 136
+ + +F+ G G + Y PD + A V++ + +
Sbjct: 98 EEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGE 157
Query: 137 PVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIK 174
+ +Y G D + P V E + + TA L++
Sbjct: 158 -LPRYLDSIGSD-----LKNPDVKELAYEKTPTASLLQ 189
>pdb|4DIU|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or94
Length = 248
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS 70
AVL LHGF R +L S+GY AP G+G PP
Sbjct: 17 AVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYSGHG---VPPE 58
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.142 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,231,888
Number of Sequences: 62578
Number of extensions: 442738
Number of successful extensions: 1026
Number of sequences better than 100.0: 127
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 819
Number of HSP's gapped (non-prelim): 142
length of query: 316
length of database: 14,973,337
effective HSP length: 99
effective length of query: 217
effective length of database: 8,778,115
effective search space: 1904850955
effective search space used: 1904850955
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)