Query 021184
Match_columns 316
No_of_seqs 289 out of 1154
Neff 12.1
Searched_HMMs 46136
Date Fri Mar 29 08:15:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021184.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021184hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 8.1E-47 1.8E-51 281.5 23.3 299 2-316 20-320 (322)
2 PLN02824 hydrolase, alpha/beta 100.0 3E-39 6.5E-44 254.5 23.4 280 3-316 7-294 (294)
3 PRK03592 haloalkane dehalogena 100.0 3.2E-38 6.9E-43 248.8 23.5 269 4-315 7-288 (295)
4 PLN02679 hydrolase, alpha/beta 100.0 8.6E-38 1.9E-42 251.1 24.6 282 7-316 64-357 (360)
5 PRK00870 haloalkane dehalogena 100.0 7.4E-38 1.6E-42 247.2 23.4 272 4-316 19-301 (302)
6 TIGR02240 PHA_depoly_arom poly 100.0 3.8E-37 8.3E-42 240.2 18.6 259 5-315 3-265 (276)
7 PRK03204 haloalkane dehalogena 100.0 6E-37 1.3E-41 239.3 19.5 267 4-313 14-285 (286)
8 TIGR03343 biphenyl_bphD 2-hydr 100.0 6.7E-36 1.4E-40 234.6 19.0 260 13-315 19-282 (282)
9 PLN02578 hydrolase 100.0 7E-35 1.5E-39 234.2 24.6 273 7-315 69-354 (354)
10 PLN03087 BODYGUARD 1 domain co 100.0 1.3E-35 2.9E-40 241.1 20.5 287 5-315 177-478 (481)
11 PLN02965 Probable pheophorbida 100.0 1.7E-35 3.7E-40 228.1 19.8 245 26-316 5-253 (255)
12 TIGR03056 bchO_mg_che_rel puta 100.0 1.4E-34 3.1E-39 226.9 21.6 265 6-314 8-278 (278)
13 PRK10349 carboxylesterase BioH 100.0 3.5E-35 7.6E-40 226.9 16.4 245 16-315 4-255 (256)
14 PRK06489 hypothetical protein; 100.0 1.1E-34 2.4E-39 233.8 18.5 119 10-128 46-189 (360)
15 PLN02385 hydrolase; alpha/beta 100.0 7.3E-34 1.6E-38 228.4 21.0 260 7-316 65-345 (349)
16 PLN03084 alpha/beta hydrolase 100.0 3.2E-33 6.9E-38 223.3 23.7 265 7-315 108-383 (383)
17 PRK10673 acyl-CoA esterase; Pr 100.0 1.2E-33 2.6E-38 218.6 18.4 236 23-316 15-255 (255)
18 TIGR03611 RutD pyrimidine util 100.0 8E-34 1.7E-38 220.2 16.7 251 16-315 1-257 (257)
19 PRK10749 lysophospholipase L2; 100.0 1.1E-32 2.3E-37 219.6 23.5 274 5-316 32-329 (330)
20 PRK11126 2-succinyl-6-hydroxy- 100.0 4.8E-33 1E-37 213.5 17.4 100 24-128 2-102 (242)
21 PLN02211 methyl indole-3-aceta 100.0 2.8E-32 6.2E-37 210.8 21.4 260 10-315 3-269 (273)
22 PHA02857 monoglyceride lipase; 100.0 2.7E-32 5.8E-37 213.3 19.8 252 6-315 3-272 (276)
23 PLN02298 hydrolase, alpha/beta 100.0 3.3E-32 7.1E-37 217.7 20.3 122 7-129 36-170 (330)
24 PRK08775 homoserine O-acetyltr 100.0 3.7E-33 8E-38 223.6 14.7 269 9-315 41-338 (343)
25 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.8E-33 1.3E-37 214.5 14.7 244 16-314 2-251 (251)
26 PRK07581 hypothetical protein; 100.0 2.8E-33 6.1E-38 224.5 13.2 277 10-316 22-336 (339)
27 KOG1454 Predicted hydrolase/ac 100.0 1.2E-32 2.5E-37 215.3 15.9 255 23-316 57-324 (326)
28 TIGR03695 menH_SHCHC 2-succiny 100.0 7E-32 1.5E-36 208.4 18.0 250 24-314 1-251 (251)
29 KOG4409 Predicted hydrolase/ac 100.0 1.9E-31 4.1E-36 200.0 19.1 109 24-133 90-200 (365)
30 TIGR01738 bioH putative pimelo 100.0 7.2E-32 1.6E-36 207.7 17.3 238 22-313 1-245 (245)
31 TIGR01250 pro_imino_pep_2 prol 100.0 1.3E-31 2.8E-36 211.3 19.1 123 6-128 4-131 (288)
32 PF12697 Abhydrolase_6: Alpha/ 100.0 1.4E-32 3.1E-37 209.2 11.5 224 27-308 1-228 (228)
33 PRK14875 acetoin dehydrogenase 100.0 5.8E-31 1.3E-35 214.6 21.0 258 7-316 112-371 (371)
34 TIGR01392 homoserO_Ac_trn homo 100.0 2.2E-32 4.7E-37 219.9 12.1 121 10-130 12-164 (351)
35 PRK00175 metX homoserine O-ace 100.0 6.2E-32 1.3E-36 218.6 14.4 120 10-129 29-183 (379)
36 COG2267 PldB Lysophospholipase 100.0 4.1E-30 9E-35 199.1 21.5 269 4-316 10-294 (298)
37 PLN02894 hydrolase, alpha/beta 100.0 8.4E-30 1.8E-34 206.9 22.7 106 23-130 104-213 (402)
38 KOG2984 Predicted hydrolase [G 100.0 1.1E-30 2.4E-35 179.6 14.2 248 4-315 21-275 (277)
39 COG1647 Esterase/lipase [Gener 100.0 2.3E-30 4.9E-35 181.2 13.1 225 24-315 15-243 (243)
40 TIGR01249 pro_imino_pep_1 prol 100.0 5E-29 1.1E-33 196.9 20.4 123 6-129 6-131 (306)
41 PLN02652 hydrolase; alpha/beta 100.0 5.2E-29 1.1E-33 200.4 20.3 254 12-315 119-386 (395)
42 PRK05855 short chain dehydroge 100.0 7.1E-29 1.5E-33 214.2 22.2 122 3-125 2-128 (582)
43 PLN02980 2-oxoglutarate decarb 100.0 3.8E-29 8.2E-34 231.9 20.3 112 16-128 1360-1480(1655)
44 PLN02511 hydrolase 100.0 1.3E-29 2.7E-34 205.1 13.4 260 10-315 78-364 (388)
45 KOG1455 Lysophospholipase [Lip 100.0 1.3E-28 2.9E-33 181.3 17.3 264 6-315 30-311 (313)
46 TIGR01607 PST-A Plasmodium sub 100.0 3.9E-27 8.5E-32 187.0 19.1 121 9-129 3-186 (332)
47 KOG2382 Predicted alpha/beta h 100.0 3.1E-28 6.7E-33 182.5 11.6 255 23-315 51-312 (315)
48 PRK06765 homoserine O-acetyltr 100.0 9E-28 2E-32 192.5 14.9 282 12-315 39-387 (389)
49 PRK05077 frsA fermentation/res 99.9 7.5E-26 1.6E-30 183.8 22.3 233 6-316 170-412 (414)
50 PRK10985 putative hydrolase; P 99.9 4.9E-26 1.1E-30 180.9 18.3 263 9-315 37-319 (324)
51 PRK13604 luxD acyl transferase 99.9 3.9E-25 8.5E-30 168.0 17.4 121 6-130 12-143 (307)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 9.1E-25 2E-29 169.3 19.8 118 7-129 5-135 (274)
53 PLN02872 triacylglycerol lipas 99.9 9.7E-25 2.1E-29 175.0 17.1 295 7-316 48-389 (395)
54 TIGR01838 PHA_synth_I poly(R)- 99.9 7E-25 1.5E-29 180.5 13.6 254 24-303 188-462 (532)
55 PRK10566 esterase; Provisional 99.9 1.2E-23 2.7E-28 161.9 19.8 110 16-125 15-139 (249)
56 TIGR01836 PHA_synth_III_C poly 99.9 1.6E-24 3.4E-29 174.2 15.3 117 10-131 44-174 (350)
57 PRK11071 esterase YqiA; Provis 99.9 2.8E-23 6E-28 151.2 15.1 184 25-314 2-189 (190)
58 KOG2564 Predicted acetyltransf 99.9 1.3E-23 2.9E-28 152.4 12.7 119 8-128 52-182 (343)
59 PF00561 Abhydrolase_1: alpha/ 99.9 1.3E-24 2.7E-29 165.7 6.8 76 52-127 1-78 (230)
60 PF12695 Abhydrolase_5: Alpha/ 99.9 9.9E-23 2.1E-27 143.6 12.2 93 26-126 1-93 (145)
61 PRK07868 acyl-CoA synthetase; 99.9 1.3E-21 2.9E-26 176.4 20.2 273 23-315 66-360 (994)
62 COG0596 MhpC Predicted hydrola 99.9 2.1E-20 4.6E-25 145.9 21.5 116 10-129 6-124 (282)
63 KOG4667 Predicted esterase [Li 99.9 9.8E-21 2.1E-25 132.2 16.2 210 19-300 28-243 (269)
64 KOG1552 Predicted alpha/beta h 99.9 9.5E-21 2.1E-25 137.4 16.4 189 24-315 60-251 (258)
65 PRK11460 putative hydrolase; P 99.9 1.4E-20 3.1E-25 141.8 16.1 177 24-314 16-210 (232)
66 PF06342 DUF1057: Alpha/beta h 99.9 8.3E-20 1.8E-24 134.2 18.6 110 26-138 37-147 (297)
67 COG0429 Predicted hydrolase of 99.9 1.1E-20 2.3E-25 141.9 14.1 243 24-315 75-339 (345)
68 PF00326 Peptidase_S9: Prolyl 99.8 1.1E-20 2.3E-25 141.7 11.3 196 40-316 3-209 (213)
69 COG2021 MET2 Homoserine acetyl 99.8 9.7E-21 2.1E-25 144.5 11.0 279 11-315 33-367 (368)
70 KOG1838 Alpha/beta hydrolase [ 99.8 1.2E-19 2.6E-24 141.4 17.1 249 23-315 124-387 (409)
71 COG1506 DAP2 Dipeptidyl aminop 99.8 7.5E-20 1.6E-24 156.7 16.7 229 6-316 367-616 (620)
72 TIGR03101 hydr2_PEP hydrolase, 99.8 7.1E-20 1.5E-24 138.9 14.7 104 24-129 25-135 (266)
73 PF03096 Ndr: Ndr family; Int 99.8 3.5E-19 7.6E-24 132.8 17.9 264 7-315 2-278 (283)
74 KOG2931 Differentiation-relate 99.8 8.6E-19 1.9E-23 128.7 18.7 267 6-315 24-305 (326)
75 KOG4391 Predicted alpha/beta h 99.8 1.7E-20 3.8E-25 131.2 8.8 210 10-315 61-281 (300)
76 COG3208 GrsT Predicted thioest 99.8 2.7E-19 5.8E-24 129.1 13.2 224 23-314 6-234 (244)
77 PLN00021 chlorophyllase 99.8 7.2E-19 1.6E-23 137.2 16.7 105 22-128 50-166 (313)
78 PLN02442 S-formylglutathione h 99.8 1.9E-18 4.2E-23 134.3 18.7 106 24-129 47-179 (283)
79 TIGR02821 fghA_ester_D S-formy 99.8 3.7E-18 8E-23 132.6 19.8 106 24-129 42-174 (275)
80 TIGR01839 PHA_synth_II poly(R) 99.8 6E-19 1.3E-23 144.0 15.2 251 24-299 215-484 (560)
81 PF02230 Abhydrolase_2: Phosph 99.8 2.7E-18 5.8E-23 128.6 12.5 180 23-315 13-214 (216)
82 PF01738 DLH: Dienelactone hyd 99.8 2.9E-18 6.3E-23 128.9 12.5 182 23-316 13-217 (218)
83 KOG2565 Predicted hydrolases o 99.8 4.3E-18 9.3E-23 128.9 12.8 292 2-315 122-462 (469)
84 TIGR01849 PHB_depoly_PhaZ poly 99.8 2.4E-17 5.2E-22 131.0 17.5 272 25-316 103-406 (406)
85 PF06500 DUF1100: Alpha/beta h 99.8 8E-17 1.7E-21 126.8 16.5 123 4-128 165-296 (411)
86 COG2945 Predicted hydrolase of 99.7 3.1E-16 6.7E-21 108.3 15.3 171 24-314 28-205 (210)
87 TIGR01840 esterase_phb esteras 99.7 4.7E-17 1E-21 121.6 12.3 108 22-129 11-131 (212)
88 PRK10162 acetyl esterase; Prov 99.7 1.2E-15 2.5E-20 120.9 20.6 101 24-129 81-196 (318)
89 PF05448 AXE1: Acetyl xylan es 99.7 6.6E-16 1.4E-20 120.8 18.8 213 24-316 83-320 (320)
90 COG0412 Dienelactone hydrolase 99.7 2.5E-15 5.5E-20 112.8 18.1 178 25-315 28-232 (236)
91 TIGR03230 lipo_lipase lipoprot 99.7 2.3E-16 4.9E-21 126.9 12.5 105 23-129 40-155 (442)
92 COG0400 Predicted esterase [Ge 99.7 5E-16 1.1E-20 112.6 11.9 172 24-309 18-202 (207)
93 COG3243 PhaC Poly(3-hydroxyalk 99.7 2.7E-16 5.9E-21 122.0 9.6 254 24-301 107-375 (445)
94 PF06821 Ser_hydrolase: Serine 99.7 9.7E-16 2.1E-20 108.8 11.5 88 27-128 1-91 (171)
95 cd00707 Pancreat_lipase_like P 99.7 2.2E-16 4.8E-21 121.8 8.3 115 13-129 24-148 (275)
96 PF00975 Thioesterase: Thioest 99.7 2.8E-14 6.1E-19 108.5 19.2 100 25-128 1-104 (229)
97 KOG2624 Triglyceride lipase-ch 99.7 4.2E-15 9.1E-20 118.1 14.8 297 7-315 52-397 (403)
98 PF08538 DUF1749: Protein of u 99.7 1.5E-14 3.1E-19 109.5 16.5 99 24-131 33-151 (303)
99 TIGR00976 /NonD putative hydro 99.7 7.2E-15 1.6E-19 125.1 16.6 116 11-129 4-133 (550)
100 COG3458 Acetyl esterase (deace 99.6 3.7E-15 8E-20 108.6 11.5 119 9-129 62-211 (321)
101 TIGR03502 lipase_Pla1_cef extr 99.6 8.7E-15 1.9E-19 125.1 12.4 109 6-114 420-576 (792)
102 PRK10115 protease 2; Provision 99.6 5.3E-14 1.1E-18 121.8 16.7 121 10-130 423-561 (686)
103 PF12146 Hydrolase_4: Putative 99.6 8.9E-15 1.9E-19 89.2 8.1 75 13-88 1-79 (79)
104 PF12740 Chlorophyllase2: Chlo 99.6 6.8E-14 1.5E-18 103.9 13.4 106 21-128 14-131 (259)
105 COG3571 Predicted hydrolase of 99.6 2.4E-13 5.3E-18 91.0 14.2 104 26-130 16-126 (213)
106 PF05728 UPF0227: Uncharacteri 99.5 1.3E-12 2.9E-17 93.8 16.2 88 27-130 2-93 (187)
107 KOG3043 Predicted hydrolase re 99.5 1.3E-13 2.8E-18 97.9 10.5 194 8-316 22-240 (242)
108 COG4757 Predicted alpha/beta h 99.5 3.9E-14 8.4E-19 100.8 7.9 116 10-127 12-137 (281)
109 PF10230 DUF2305: Uncharacteri 99.5 3.5E-13 7.7E-18 103.4 13.4 107 24-130 2-124 (266)
110 PF02273 Acyl_transf_2: Acyl t 99.5 5.4E-13 1.2E-17 96.0 13.0 117 8-128 6-134 (294)
111 PF07859 Abhydrolase_3: alpha/ 99.5 1.8E-13 3.8E-18 102.7 10.3 99 27-130 1-112 (211)
112 PF06057 VirJ: Bacterial virul 99.5 1.8E-12 3.8E-17 91.1 13.5 97 26-129 4-108 (192)
113 PF03403 PAF-AH_p_II: Platelet 99.5 4.5E-13 9.7E-18 107.6 11.4 107 22-129 98-263 (379)
114 PTZ00472 serine carboxypeptida 99.5 6.1E-12 1.3E-16 104.0 17.3 117 13-130 60-218 (462)
115 PF07224 Chlorophyllase: Chlor 99.5 1.8E-12 3.8E-17 94.5 12.0 107 21-130 43-159 (307)
116 PRK05371 x-prolyl-dipeptidyl a 99.5 3.7E-12 8E-17 111.2 16.2 84 42-128 270-373 (767)
117 PRK10252 entF enterobactin syn 99.4 1E-11 2.3E-16 117.3 19.0 103 21-128 1065-1171(1296)
118 COG3545 Predicted esterase of 99.4 6.8E-12 1.5E-16 86.0 12.4 91 25-129 3-95 (181)
119 PF09752 DUF2048: Uncharacteri 99.4 4.7E-11 1E-15 92.1 18.2 241 24-315 92-348 (348)
120 PF02129 Peptidase_S15: X-Pro 99.4 3E-12 6.4E-17 99.6 11.7 117 12-131 1-139 (272)
121 KOG2551 Phospholipase/carboxyh 99.4 1.9E-11 4.1E-16 87.1 13.6 59 247-315 161-219 (230)
122 KOG2100 Dipeptidyl aminopeptid 99.4 1.9E-11 4.2E-16 106.5 16.5 222 4-314 498-745 (755)
123 PF06028 DUF915: Alpha/beta hy 99.4 2.9E-12 6.2E-17 96.5 9.5 107 24-130 11-145 (255)
124 KOG1515 Arylacetamide deacetyl 99.4 6.6E-11 1.4E-15 92.5 17.1 105 24-133 90-212 (336)
125 PF08840 BAAT_C: BAAT / Acyl-C 99.4 1.9E-12 4.1E-17 96.1 7.0 38 92-130 21-58 (213)
126 PF07819 PGAP1: PGAP1-like pro 99.4 1E-11 2.2E-16 92.7 10.7 103 23-130 3-125 (225)
127 COG4188 Predicted dienelactone 99.3 6.3E-12 1.4E-16 97.1 9.3 93 24-116 71-182 (365)
128 COG3319 Thioesterase domains o 99.3 1E-10 2.3E-15 87.8 15.6 100 25-129 1-104 (257)
129 PF03959 FSH1: Serine hydrolas 99.3 3.7E-12 7.9E-17 94.8 7.5 105 23-128 3-145 (212)
130 KOG2281 Dipeptidyl aminopeptid 99.3 2.6E-11 5.7E-16 99.0 11.8 209 24-316 642-867 (867)
131 COG0657 Aes Esterase/lipase [L 99.3 5.2E-10 1.1E-14 89.1 18.6 103 24-131 79-194 (312)
132 PLN02733 phosphatidylcholine-s 99.3 2.2E-11 4.8E-16 99.1 10.4 124 6-130 70-203 (440)
133 PF10503 Esterase_phd: Esteras 99.3 1.3E-10 2.8E-15 85.6 13.0 107 24-130 16-134 (220)
134 KOG4627 Kynurenine formamidase 99.3 1.1E-10 2.3E-15 82.0 10.4 110 15-129 55-173 (270)
135 KOG2112 Lysophospholipase [Lip 99.2 1.8E-10 4E-15 81.6 11.2 103 25-128 4-128 (206)
136 PF12715 Abhydrolase_7: Abhydr 99.2 1.5E-11 3.2E-16 95.8 5.8 102 24-126 115-258 (390)
137 PF11339 DUF3141: Protein of u 99.2 1.3E-09 2.8E-14 87.7 15.9 210 44-271 93-319 (581)
138 PF03583 LIP: Secretory lipase 99.2 1.9E-10 4.2E-15 89.5 11.2 64 247-313 217-282 (290)
139 KOG3975 Uncharacterized conser 99.2 8.8E-10 1.9E-14 79.9 13.4 125 5-129 2-148 (301)
140 PF05677 DUF818: Chlamydia CHL 99.2 1.9E-08 4.1E-13 77.1 20.4 107 4-115 112-237 (365)
141 smart00824 PKS_TE Thioesterase 99.2 4.7E-09 1E-13 78.8 16.4 95 29-128 2-102 (212)
142 PF01674 Lipase_2: Lipase (cla 99.2 8.4E-11 1.8E-15 86.4 6.5 89 25-114 2-96 (219)
143 PRK04940 hypothetical protein; 99.2 3E-09 6.5E-14 74.9 13.7 89 27-130 2-94 (180)
144 KOG3847 Phospholipase A2 (plat 99.1 4.8E-10 1E-14 84.0 8.3 106 24-130 118-277 (399)
145 COG4099 Predicted peptidase [G 99.0 3.3E-09 7.1E-14 79.1 8.7 114 12-128 170-304 (387)
146 PF00151 Lipase: Lipase; Inte 99.0 6.2E-10 1.4E-14 87.8 4.9 105 24-130 71-189 (331)
147 PF05990 DUF900: Alpha/beta hy 98.9 3.1E-08 6.7E-13 74.6 10.4 105 23-128 17-137 (233)
148 COG4814 Uncharacterized protei 98.9 4.8E-07 1E-11 66.3 15.8 104 26-129 47-177 (288)
149 PF12048 DUF3530: Protein of u 98.8 5E-07 1.1E-11 71.1 16.8 103 26-128 89-229 (310)
150 PF00450 Peptidase_S10: Serine 98.8 5.9E-08 1.3E-12 80.8 11.9 122 8-130 15-183 (415)
151 COG3509 LpqC Poly(3-hydroxybut 98.8 8.7E-08 1.9E-12 71.9 11.2 124 5-128 36-179 (312)
152 PF05705 DUF829: Eukaryotic pr 98.8 1.6E-07 3.5E-12 71.8 13.0 64 247-313 176-240 (240)
153 KOG3253 Predicted alpha/beta h 98.8 3E-08 6.6E-13 81.1 7.8 97 24-128 176-286 (784)
154 COG1075 LipA Predicted acetylt 98.7 4.5E-08 9.8E-13 78.0 7.8 102 25-130 60-166 (336)
155 KOG4840 Predicted hydrolases o 98.7 1.3E-06 2.8E-11 62.7 13.8 102 24-130 36-146 (299)
156 COG2936 Predicted acyl esteras 98.7 2.1E-07 4.5E-12 77.2 11.3 122 8-130 24-161 (563)
157 PF05057 DUF676: Putative seri 98.7 7.1E-08 1.5E-12 72.1 7.1 85 25-112 5-97 (217)
158 PF04301 DUF452: Protein of un 98.7 3.4E-07 7.3E-12 66.8 9.9 83 24-132 11-94 (213)
159 KOG1553 Predicted alpha/beta h 98.7 1.8E-07 3.8E-12 71.6 8.7 99 25-128 244-345 (517)
160 KOG1551 Uncharacterized conser 98.6 2.3E-06 4.9E-11 63.2 12.9 56 252-315 309-365 (371)
161 PF05577 Peptidase_S28: Serine 98.6 1.4E-06 3.1E-11 72.8 12.5 115 15-130 15-150 (434)
162 PLN02209 serine carboxypeptida 98.5 2.3E-05 5E-10 64.7 18.6 117 13-130 51-214 (437)
163 PF10142 PhoPQ_related: PhoPQ- 98.5 1.3E-06 2.8E-11 69.5 10.6 60 247-315 260-319 (367)
164 KOG3101 Esterase D [General fu 98.5 7.5E-07 1.6E-11 63.4 7.8 107 24-130 44-178 (283)
165 PF00756 Esterase: Putative es 98.5 3.9E-07 8.4E-12 70.4 6.6 52 79-130 98-152 (251)
166 PF02450 LCAT: Lecithin:choles 98.5 1.7E-06 3.6E-11 70.8 10.1 111 10-130 36-162 (389)
167 COG3946 VirJ Type IV secretory 98.5 6.3E-06 1.4E-10 64.8 12.3 84 26-116 262-349 (456)
168 COG4782 Uncharacterized protei 98.4 2.3E-06 5E-11 66.4 9.6 104 24-128 116-234 (377)
169 PRK10439 enterobactin/ferric e 98.4 2.7E-06 5.9E-11 69.8 10.3 103 24-128 209-323 (411)
170 PLN03016 sinapoylglucose-malat 98.4 1.8E-05 3.9E-10 65.3 14.2 65 249-315 347-430 (433)
171 PLN02606 palmitoyl-protein thi 98.3 2.6E-06 5.5E-11 65.2 7.8 102 23-129 25-133 (306)
172 KOG1282 Serine carboxypeptidas 98.3 0.00016 3.5E-09 59.4 18.1 123 7-130 47-215 (454)
173 cd00312 Esterase_lipase Estera 98.3 2.5E-06 5.4E-11 72.8 7.6 105 24-130 95-215 (493)
174 COG1770 PtrB Protease II [Amin 98.3 0.0001 2.2E-09 62.0 15.7 120 11-130 427-564 (682)
175 COG1505 Serine proteases of th 98.2 7.2E-06 1.6E-10 67.8 8.7 124 5-128 395-535 (648)
176 KOG2541 Palmitoyl protein thio 98.2 1.6E-05 3.4E-10 59.1 9.3 99 25-128 24-128 (296)
177 PF08386 Abhydrolase_4: TAP-li 98.2 2.4E-06 5.2E-11 55.5 4.3 61 248-315 33-93 (103)
178 COG3150 Predicted esterase [Ge 98.2 8.2E-06 1.8E-10 56.0 6.5 90 27-130 2-93 (191)
179 COG1073 Hydrolases of the alph 98.2 2.9E-05 6.3E-10 61.5 10.9 64 247-315 229-296 (299)
180 KOG3724 Negative regulator of 98.2 1.1E-05 2.5E-10 68.7 8.6 100 24-128 89-220 (973)
181 COG0627 Predicted esterase [Ge 98.1 1.4E-05 3E-10 62.7 8.0 109 24-132 54-191 (316)
182 PLN02633 palmitoyl protein thi 98.1 3.5E-05 7.7E-10 59.2 9.7 102 23-129 24-132 (314)
183 KOG2183 Prolylcarboxypeptidase 98.1 2.2E-05 4.9E-10 62.0 8.1 104 25-128 81-202 (492)
184 PLN02213 sinapoylglucose-malat 98.1 0.00097 2.1E-08 53.3 17.5 65 249-315 233-316 (319)
185 COG2272 PnbA Carboxylesterase 98.1 7.8E-05 1.7E-09 60.8 10.9 120 10-129 76-218 (491)
186 PF02089 Palm_thioest: Palmito 98.0 5.7E-06 1.2E-10 62.8 4.3 104 24-128 5-116 (279)
187 PF11144 DUF2920: Protein of u 98.0 0.00051 1.1E-08 55.1 14.8 36 94-129 185-220 (403)
188 PF07082 DUF1350: Protein of u 98.0 0.0011 2.4E-08 49.5 14.8 90 26-126 19-123 (250)
189 COG4553 DepA Poly-beta-hydroxy 98.0 0.00014 3E-09 54.9 9.9 103 24-130 103-211 (415)
190 PF10340 DUF2424: Protein of u 97.9 7.4E-05 1.6E-09 59.5 8.9 105 24-131 122-238 (374)
191 KOG2237 Predicted serine prote 97.9 0.00028 6.1E-09 59.2 11.8 119 11-129 449-585 (712)
192 PF00135 COesterase: Carboxyle 97.8 9.6E-05 2.1E-09 64.0 8.1 119 12-130 107-247 (535)
193 PLN02517 phosphatidylcholine-s 97.8 9.6E-05 2.1E-09 61.9 7.3 90 38-129 156-264 (642)
194 KOG3967 Uncharacterized conser 97.7 0.00058 1.3E-08 49.1 9.2 105 24-128 101-227 (297)
195 KOG2369 Lecithin:cholesterol a 97.7 5.4E-05 1.2E-09 61.2 4.5 84 38-128 124-225 (473)
196 COG2939 Carboxypeptidase C (ca 97.7 0.0046 1E-07 51.0 15.0 108 24-132 101-240 (498)
197 cd00741 Lipase Lipase. Lipase 97.7 0.00015 3.2E-09 51.2 6.0 53 78-130 9-69 (153)
198 COG2382 Fes Enterochelin ester 97.7 0.00039 8.4E-09 53.2 8.4 36 94-129 178-213 (299)
199 COG4287 PqaA PhoPQ-activated p 97.7 0.00045 9.8E-09 54.0 8.8 59 247-314 327-385 (507)
200 PF06441 EHN: Epoxide hydrolas 97.6 0.00014 3E-09 47.5 4.7 43 1-43 65-111 (112)
201 KOG2182 Hydrolytic enzymes of 97.6 0.00073 1.6E-08 55.2 9.2 110 23-132 85-211 (514)
202 PF01764 Lipase_3: Lipase (cla 97.6 0.00025 5.4E-09 49.2 6.0 37 78-114 49-85 (140)
203 PF11187 DUF2974: Protein of u 97.4 0.0044 9.6E-08 46.5 10.5 49 81-130 73-125 (224)
204 COG2830 Uncharacterized protei 97.3 0.011 2.3E-07 40.7 10.5 82 26-133 13-95 (214)
205 COG2819 Predicted hydrolase of 97.1 0.0011 2.4E-08 50.0 5.1 40 91-130 135-174 (264)
206 KOG2521 Uncharacterized conser 97.1 0.019 4.2E-07 45.7 12.0 65 248-315 224-289 (350)
207 cd00519 Lipase_3 Lipase (class 97.0 0.0019 4.1E-08 49.1 5.4 24 91-114 126-149 (229)
208 PF06259 Abhydrolase_8: Alpha/ 96.9 0.013 2.7E-07 42.1 8.9 54 76-129 87-145 (177)
209 COG4947 Uncharacterized protei 96.9 0.0017 3.7E-08 45.1 4.3 114 13-130 14-138 (227)
210 PF11288 DUF3089: Protein of u 96.8 0.003 6.5E-08 46.2 5.2 70 44-114 39-116 (207)
211 PLN02162 triacylglycerol lipas 96.8 0.0038 8.2E-08 51.2 6.3 36 77-112 262-297 (475)
212 PLN00413 triacylglycerol lipas 96.8 0.0042 9.1E-08 51.1 6.4 36 77-112 268-303 (479)
213 PF01083 Cutinase: Cutinase; 96.7 0.0053 1.2E-07 44.4 5.8 74 52-129 40-123 (179)
214 PF05576 Peptidase_S37: PS-10 96.6 0.0052 1.1E-07 49.4 5.6 105 24-130 63-171 (448)
215 PLN02571 triacylglycerol lipas 96.5 0.0053 1.1E-07 49.9 4.9 37 77-113 208-246 (413)
216 PLN02454 triacylglycerol lipas 96.5 0.0058 1.3E-07 49.7 5.1 35 79-113 212-248 (414)
217 KOG4372 Predicted alpha/beta h 96.4 0.0043 9.3E-08 49.7 4.0 88 24-112 80-169 (405)
218 KOG1516 Carboxylesterase and r 96.4 0.017 3.6E-07 50.4 7.9 106 24-129 112-233 (545)
219 PLN02408 phospholipase A1 96.2 0.0095 2.1E-07 47.8 4.8 37 78-114 183-221 (365)
220 PLN02310 triacylglycerol lipas 96.1 0.017 3.7E-07 47.0 6.1 37 77-113 189-229 (405)
221 PF06850 PHB_depo_C: PHB de-po 96.1 0.0074 1.6E-07 43.2 3.2 65 249-316 134-202 (202)
222 PLN02934 triacylglycerol lipas 96.0 0.014 3E-07 48.6 5.0 36 77-112 305-340 (515)
223 KOG1202 Animal-type fatty acid 96.0 0.044 9.6E-07 50.4 8.3 95 23-128 2122-2219(2376)
224 PLN02324 triacylglycerol lipas 95.8 0.017 3.8E-07 47.0 4.8 36 78-113 198-235 (415)
225 PF05277 DUF726: Protein of un 95.7 0.037 7.9E-07 44.3 6.0 40 91-130 218-262 (345)
226 PLN02802 triacylglycerol lipas 95.6 0.023 5E-07 47.4 4.9 37 78-114 313-351 (509)
227 PF07519 Tannase: Tannase and 95.5 0.073 1.6E-06 45.1 7.7 67 247-315 351-426 (474)
228 PLN02753 triacylglycerol lipas 95.5 0.028 6E-07 47.1 5.0 37 77-113 291-332 (531)
229 PLN03037 lipase class 3 family 95.5 0.029 6.2E-07 47.0 4.9 37 77-113 298-338 (525)
230 PLN02719 triacylglycerol lipas 95.3 0.036 7.8E-07 46.3 5.0 37 77-113 277-318 (518)
231 PLN02761 lipase class 3 family 95.3 0.036 7.9E-07 46.4 5.0 37 77-113 272-314 (527)
232 PF04083 Abhydro_lipase: Parti 95.0 0.052 1.1E-06 31.4 3.7 34 7-40 16-59 (63)
233 KOG4569 Predicted lipase [Lipi 94.8 0.06 1.3E-06 43.4 4.9 37 77-113 155-191 (336)
234 PF09949 DUF2183: Uncharacteri 94.6 0.73 1.6E-05 29.6 8.7 85 38-123 11-97 (100)
235 PLN02847 triacylglycerol lipas 94.5 0.082 1.8E-06 45.1 5.0 21 93-113 251-271 (633)
236 PF08237 PE-PPE: PE-PPE domain 94.3 0.3 6.4E-06 36.9 7.3 64 51-114 2-69 (225)
237 PF07519 Tannase: Tannase and 93.1 0.14 3E-06 43.5 4.3 82 45-129 54-151 (474)
238 COG5153 CVT17 Putative lipase 92.4 0.33 7.3E-06 37.3 4.9 34 91-126 274-307 (425)
239 KOG4540 Putative lipase essent 92.4 0.33 7.3E-06 37.3 4.9 34 91-126 274-307 (425)
240 PF06792 UPF0261: Uncharacteri 91.3 3.3 7.2E-05 34.1 9.7 100 25-124 2-126 (403)
241 TIGR03712 acc_sec_asp2 accesso 90.8 9.3 0.0002 32.4 12.3 112 9-128 271-390 (511)
242 KOG4388 Hormone-sensitive lipa 90.5 2.1 4.6E-05 36.8 8.0 99 26-129 398-509 (880)
243 PF05576 Peptidase_S37: PS-10 90.3 0.76 1.6E-05 37.6 5.2 57 248-313 350-411 (448)
244 KOG2029 Uncharacterized conser 90.1 0.67 1.4E-05 39.7 4.9 53 75-127 505-571 (697)
245 PRK02399 hypothetical protein; 89.7 7.5 0.00016 32.2 10.3 99 25-123 4-127 (406)
246 KOG1283 Serine carboxypeptidas 88.7 4.2 9.2E-05 32.2 7.9 106 24-130 31-168 (414)
247 PF03283 PAE: Pectinacetyleste 86.9 3.8 8.2E-05 33.6 7.3 40 92-131 155-198 (361)
248 KOG2385 Uncharacterized conser 86.3 1.9 4.1E-05 36.4 5.2 41 90-130 444-489 (633)
249 COG0529 CysC Adenylylsulfate k 85.0 8.2 0.00018 27.9 7.1 61 22-86 20-84 (197)
250 PF09994 DUF2235: Uncharacteri 83.2 9.9 0.00021 30.0 7.9 89 25-113 2-112 (277)
251 cd01714 ETF_beta The electron 82.6 9.1 0.0002 28.5 7.1 71 44-124 69-145 (202)
252 KOG2872 Uroporphyrinogen decar 81.5 6.8 0.00015 30.5 6.0 71 24-101 252-336 (359)
253 PF00698 Acyl_transf_1: Acyl t 81.1 1.7 3.6E-05 35.1 3.0 32 82-113 73-104 (318)
254 COG3933 Transcriptional antite 79.7 16 0.00034 30.6 7.9 74 24-110 109-182 (470)
255 PRK12467 peptide synthase; Pro 79.5 9.9 0.00021 42.3 8.6 96 25-125 3693-3792(3956)
256 smart00827 PKS_AT Acyl transfe 79.0 2.9 6.3E-05 33.3 3.8 31 83-113 72-102 (298)
257 PRK05579 bifunctional phosphop 77.7 39 0.00084 28.4 9.8 73 24-100 116-196 (399)
258 TIGR03131 malonate_mdcH malona 77.3 3.5 7.6E-05 32.8 3.8 31 83-113 66-96 (295)
259 KOG1252 Cystathionine beta-syn 75.8 33 0.00072 27.7 8.3 53 8-61 188-249 (362)
260 PF10081 Abhydrolase_9: Alpha/ 75.2 5.5 0.00012 31.1 4.0 51 80-130 93-149 (289)
261 PF03610 EIIA-man: PTS system 75.1 21 0.00046 23.6 8.1 74 26-112 2-77 (116)
262 cd07225 Pat_PNPLA6_PNPLA7 Pata 74.8 4.8 0.0001 32.2 3.9 33 83-115 33-65 (306)
263 TIGR00521 coaBC_dfp phosphopan 74.6 50 0.0011 27.7 9.7 73 25-100 113-193 (390)
264 PRK10279 hypothetical protein; 74.1 4.9 0.00011 32.1 3.7 33 83-115 23-55 (300)
265 PF06309 Torsin: Torsin; Inte 73.9 25 0.00054 23.9 6.4 29 23-51 51-81 (127)
266 cd07198 Patatin Patatin-like p 73.7 5.9 0.00013 28.5 3.9 33 83-115 16-48 (172)
267 TIGR00128 fabD malonyl CoA-acy 73.5 4.7 0.0001 31.9 3.6 31 84-114 73-104 (290)
268 cd07207 Pat_ExoU_VipD_like Exo 71.8 6.6 0.00014 28.9 3.8 30 85-114 19-48 (194)
269 PF12242 Eno-Rase_NADH_b: NAD( 70.2 12 0.00027 22.5 3.8 25 91-115 38-62 (78)
270 PF11713 Peptidase_C80: Peptid 70.1 3.3 7.2E-05 29.3 1.8 49 57-105 59-116 (157)
271 cd07227 Pat_Fungal_NTE1 Fungal 69.9 7.7 0.00017 30.4 3.9 32 83-114 28-59 (269)
272 COG1752 RssA Predicted esteras 69.9 6.9 0.00015 31.4 3.8 33 83-115 29-61 (306)
273 cd07210 Pat_hypo_W_succinogene 69.0 9.1 0.0002 29.0 4.1 29 87-115 22-50 (221)
274 KOG0781 Signal recognition par 68.9 27 0.00058 29.8 6.8 73 31-113 445-518 (587)
275 COG1576 Uncharacterized conser 67.7 17 0.00037 25.5 4.7 48 51-110 67-115 (155)
276 COG3946 VirJ Type IV secretory 66.8 37 0.0008 28.3 7.0 102 26-127 50-156 (456)
277 COG3340 PepE Peptidase E [Amin 66.6 37 0.00081 25.4 6.4 38 22-59 30-70 (224)
278 PF00448 SRP54: SRP54-type pro 64.9 55 0.0012 24.3 8.4 72 42-123 74-147 (196)
279 COG0541 Ffh Signal recognition 64.4 43 0.00094 28.2 7.1 65 49-123 180-246 (451)
280 cd07228 Pat_NTE_like_bacteria 64.4 12 0.00027 27.0 3.9 29 87-115 22-50 (175)
281 cd07209 Pat_hypo_Ecoli_Z1214_l 63.8 12 0.00025 28.2 3.8 32 84-115 17-48 (215)
282 PF10605 3HBOH: 3HB-oligomer h 63.6 9.6 0.00021 33.3 3.5 50 247-297 552-604 (690)
283 cd07230 Pat_TGL4-5_like Triacy 62.6 6.1 0.00013 33.3 2.3 34 87-120 95-128 (421)
284 TIGR02816 pfaB_fam PfaB family 62.4 9.8 0.00021 33.2 3.4 32 83-114 254-286 (538)
285 PRK14974 cell division protein 62.3 77 0.0017 26.0 8.2 66 48-123 219-286 (336)
286 cd07205 Pat_PNPLA6_PNPLA7_NTE1 61.7 17 0.00036 26.3 4.2 28 87-114 22-49 (175)
287 COG0279 GmhA Phosphoheptose is 61.4 12 0.00027 26.5 3.1 73 28-104 44-120 (176)
288 TIGR02764 spore_ybaN_pdaB poly 61.1 9.1 0.0002 28.1 2.7 33 26-58 153-188 (191)
289 TIGR02873 spore_ylxY probable 60.8 12 0.00027 29.2 3.5 33 26-58 232-264 (268)
290 TIGR01425 SRP54_euk signal rec 60.7 1E+02 0.0022 26.3 8.9 69 45-123 176-246 (429)
291 KOG1200 Mitochondrial/plastidi 59.9 60 0.0013 24.1 6.4 32 27-60 16-47 (256)
292 PF02590 SPOUT_MTase: Predicte 59.2 23 0.00051 25.0 4.3 63 51-129 67-129 (155)
293 TIGR02884 spore_pdaA delta-lac 59.2 14 0.00031 28.0 3.6 34 25-58 187-221 (224)
294 TIGR03709 PPK2_rel_1 polyphosp 57.4 20 0.00044 28.0 4.1 38 23-60 54-93 (264)
295 COG1448 TyrB Aspartate/tyrosin 56.6 99 0.0021 25.7 7.7 85 25-126 172-263 (396)
296 cd07232 Pat_PLPL Patain-like p 56.5 9.2 0.0002 32.1 2.3 37 85-121 87-123 (407)
297 PF01583 APS_kinase: Adenylyls 55.6 27 0.00058 24.8 4.1 36 24-59 1-38 (156)
298 COG4822 CbiK Cobalamin biosynt 55.6 87 0.0019 23.6 6.6 59 25-98 139-199 (265)
299 PHA02114 hypothetical protein 55.6 21 0.00045 22.6 3.1 34 25-58 83-116 (127)
300 cd07208 Pat_hypo_Ecoli_yjju_li 55.4 20 0.00044 28.0 4.0 33 85-117 18-51 (266)
301 PRK00103 rRNA large subunit me 54.5 50 0.0011 23.5 5.3 46 51-106 67-112 (157)
302 cd07212 Pat_PNPLA9 Patatin-lik 54.4 24 0.00053 28.4 4.3 19 96-114 35-53 (312)
303 cd07231 Pat_SDP1-like Sugar-De 54.2 11 0.00024 30.2 2.2 33 86-118 89-121 (323)
304 cd07229 Pat_TGL3_like Triacylg 54.1 11 0.00024 31.3 2.4 33 89-121 107-139 (391)
305 TIGR03707 PPK2_P_aer polyphosp 54.1 22 0.00048 27.1 3.7 68 24-105 30-101 (230)
306 PF00326 Peptidase_S9: Prolyl 52.7 41 0.0009 25.0 5.2 42 23-64 143-187 (213)
307 cd06292 PBP1_LacI_like_10 Liga 52.5 92 0.002 24.1 7.3 74 26-101 58-131 (273)
308 PF03853 YjeF_N: YjeF-related 51.7 22 0.00047 25.6 3.3 34 23-56 24-57 (169)
309 COG3887 Predicted signaling pr 51.3 1.2E+02 0.0027 26.9 7.8 100 25-127 259-377 (655)
310 TIGR00246 tRNA_RlmH_YbeA rRNA 51.2 40 0.00086 23.8 4.4 45 52-107 66-110 (153)
311 COG3727 Vsr DNA G:T-mismatch r 50.3 25 0.00054 23.8 3.0 14 44-57 101-114 (150)
312 PRK05282 (alpha)-aspartyl dipe 50.2 54 0.0012 25.1 5.3 38 23-60 30-70 (233)
313 TIGR01626 ytfJ_HI0045 conserve 48.7 1.1E+02 0.0023 22.6 7.8 52 7-58 38-101 (184)
314 COG3673 Uncharacterized conser 47.9 1.5E+02 0.0033 24.1 8.4 89 25-113 32-142 (423)
315 PF08484 Methyltransf_14: C-me 47.2 71 0.0015 22.8 5.2 48 79-126 53-102 (160)
316 COG1087 GalE UDP-glucose 4-epi 46.9 94 0.002 25.0 6.1 91 40-133 13-125 (329)
317 cd07224 Pat_like Patatin-like 46.7 35 0.00075 26.2 3.9 32 84-115 18-51 (233)
318 PF04244 DPRP: Deoxyribodipyri 46.6 63 0.0014 24.6 5.1 49 39-98 50-98 (224)
319 PF03976 PPK2: Polyphosphate k 46.6 13 0.00029 28.2 1.6 37 24-60 30-68 (228)
320 PF14253 AbiH: Bacteriophage a 46.5 23 0.00051 27.7 3.1 15 91-105 233-247 (270)
321 COG0331 FabD (acyl-carrier-pro 45.9 30 0.00064 27.9 3.5 22 91-112 83-104 (310)
322 PF02633 Creatininase: Creatin 45.8 1.2E+02 0.0025 23.4 6.6 72 41-113 43-121 (237)
323 KOG1209 1-Acyl dihydroxyaceton 44.4 49 0.0011 25.0 4.0 39 21-60 3-41 (289)
324 PLN03050 pyridoxine (pyridoxam 44.2 50 0.0011 25.6 4.4 34 25-58 61-94 (246)
325 KOG1202 Animal-type fatty acid 43.9 14 0.0003 35.5 1.6 26 81-106 570-595 (2376)
326 PF03490 Varsurf_PPLC: Variant 43.4 36 0.00077 18.5 2.4 28 72-99 4-31 (51)
327 PF06289 FlbD: Flagellar prote 43.2 58 0.0013 18.7 3.4 35 279-315 23-57 (60)
328 cd07206 Pat_TGL3-4-5_SDP1 Tria 43.1 36 0.00078 27.2 3.5 29 90-118 94-122 (298)
329 PRK15180 Vi polysaccharide bio 42.8 1E+02 0.0022 26.6 6.0 78 25-102 97-198 (831)
330 PF05577 Peptidase_S28: Serine 42.6 34 0.00073 29.1 3.6 39 249-297 376-414 (434)
331 cd05312 NAD_bind_1_malic_enz N 42.2 72 0.0016 25.3 4.9 82 26-111 26-124 (279)
332 PF13207 AAA_17: AAA domain; P 42.0 75 0.0016 20.9 4.6 37 27-65 1-40 (121)
333 COG1582 FlgEa Uncharacterized 41.8 67 0.0014 18.6 3.4 35 279-315 23-57 (67)
334 cd03146 GAT1_Peptidase_E Type 41.5 1.5E+02 0.0033 22.3 6.7 85 23-109 30-129 (212)
335 cd07204 Pat_PNPLA_like Patatin 41.4 49 0.0011 25.5 4.0 20 96-115 34-53 (243)
336 COG1506 DAP2 Dipeptidyl aminop 41.4 61 0.0013 29.2 5.1 42 24-65 551-595 (620)
337 PRK01261 aroD 3-dehydroquinate 41.2 65 0.0014 24.6 4.5 65 75-143 157-221 (229)
338 PRK07313 phosphopantothenoylcy 40.9 1.4E+02 0.0031 21.8 6.5 61 24-88 113-179 (182)
339 PF02230 Abhydrolase_2: Phosph 39.7 1.2E+02 0.0025 22.8 5.8 57 24-89 155-214 (216)
340 PF04763 DUF562: Protein of un 39.0 1.2E+02 0.0025 20.9 4.8 38 24-61 17-61 (146)
341 cd00382 beta_CA Carbonic anhyd 38.9 45 0.00098 22.3 3.1 31 78-108 44-74 (119)
342 COG0518 GuaA GMP synthase - Gl 38.8 1.6E+02 0.0036 21.9 6.4 35 77-111 62-96 (198)
343 PF05724 TPMT: Thiopurine S-me 38.8 39 0.00085 25.6 3.1 30 25-59 38-67 (218)
344 cd07218 Pat_iPLA2 Calcium-inde 38.3 57 0.0012 25.3 3.9 20 96-115 33-52 (245)
345 PRK06029 3-octaprenyl-4-hydrox 38.2 1.6E+02 0.0035 21.7 7.3 62 24-93 115-177 (185)
346 COG2240 PdxK Pyridoxal/pyridox 37.8 2.1E+02 0.0045 22.8 9.0 92 30-130 11-115 (281)
347 cd03818 GT1_ExpC_like This fam 37.3 73 0.0016 26.6 4.8 37 27-65 2-38 (396)
348 COG1856 Uncharacterized homolo 36.9 1.5E+02 0.0032 22.7 5.5 82 44-128 103-190 (275)
349 cd03131 GATase1_HTS Type 1 glu 36.6 22 0.00048 25.8 1.4 36 79-114 83-118 (175)
350 COG0218 Predicted GTPase [Gene 36.6 66 0.0014 23.9 3.8 16 54-69 72-87 (200)
351 PRK04148 hypothetical protein; 36.6 74 0.0016 21.9 3.8 30 93-126 18-47 (134)
352 PRK13256 thiopurine S-methyltr 36.5 40 0.00087 25.7 2.8 28 27-59 46-73 (226)
353 PRK03363 fixB putative electro 36.2 2.4E+02 0.0051 23.0 7.2 60 45-114 42-103 (313)
354 KOG0780 Signal recognition par 35.9 2.5E+02 0.0053 23.8 7.0 47 45-101 177-223 (483)
355 cd07221 Pat_PNPLA3 Patatin-lik 35.7 68 0.0015 25.0 4.0 21 95-115 34-54 (252)
356 COG4850 Uncharacterized conser 35.6 1.7E+02 0.0036 23.9 5.9 46 82-127 267-314 (373)
357 PRK04435 hypothetical protein; 35.5 1.4E+02 0.0029 21.0 5.1 42 18-59 61-102 (147)
358 cd00401 AdoHcyase S-adenosyl-L 35.5 2.2E+02 0.0047 24.3 7.1 67 40-122 74-140 (413)
359 PF08433 KTI12: Chromatin asso 35.5 1.1E+02 0.0024 24.1 5.2 38 26-63 2-41 (270)
360 PF10686 DUF2493: Protein of u 35.4 90 0.0019 18.6 3.6 11 24-34 31-41 (71)
361 TIGR02069 cyanophycinase cyano 35.1 2.2E+02 0.0047 22.2 6.9 38 23-60 27-66 (250)
362 cd07220 Pat_PNPLA2 Patatin-lik 35.1 65 0.0014 25.0 3.8 21 95-115 38-58 (249)
363 cd01819 Patatin_and_cPLA2 Pata 35.1 71 0.0015 22.5 3.8 19 93-111 28-46 (155)
364 TIGR00959 ffh signal recogniti 34.8 3E+02 0.0064 23.7 8.7 70 44-123 175-246 (428)
365 PRK14729 miaA tRNA delta(2)-is 34.4 2.5E+02 0.0054 22.7 7.9 75 25-101 4-101 (300)
366 PRK05368 homoserine O-succinyl 34.2 58 0.0013 26.2 3.4 32 82-113 123-154 (302)
367 PRK11320 prpB 2-methylisocitra 34.0 2.5E+02 0.0054 22.6 8.1 64 32-99 88-155 (292)
368 TIGR03586 PseI pseudaminic aci 33.6 2.7E+02 0.0058 22.9 9.3 83 23-115 133-216 (327)
369 TIGR02354 thiF_fam2 thiamine b 33.2 97 0.0021 23.1 4.4 40 85-127 14-54 (200)
370 PRK05665 amidotransferase; Pro 33.2 83 0.0018 24.3 4.1 37 75-111 72-108 (240)
371 KOG2182 Hydrolytic enzymes of 33.0 99 0.0021 26.7 4.7 57 248-314 432-500 (514)
372 PLN03019 carbonic anhydrase 33.0 69 0.0015 26.0 3.6 31 79-109 201-231 (330)
373 cd07217 Pat17_PNPLA8_PNPLA9_li 32.6 42 0.0009 27.6 2.5 18 96-113 44-61 (344)
374 cd00006 PTS_IIA_man PTS_IIA, P 32.0 1.6E+02 0.0034 19.7 7.7 70 26-108 3-73 (122)
375 cd03379 beta_CA_cladeD Carboni 31.8 76 0.0017 22.0 3.4 29 78-106 41-69 (142)
376 PF03681 UPF0150: Uncharacteri 31.8 81 0.0017 16.7 2.9 33 49-88 11-43 (48)
377 PRK00726 murG undecaprenyldiph 31.6 2.6E+02 0.0057 22.9 7.1 34 27-60 5-38 (357)
378 COG5441 Uncharacterized conser 31.6 2.8E+02 0.006 22.4 7.8 98 26-123 3-123 (401)
379 cd00883 beta_CA_cladeA Carboni 31.5 76 0.0016 23.2 3.5 32 79-110 67-98 (182)
380 PRK06731 flhF flagellar biosyn 31.5 2.6E+02 0.0057 22.1 8.7 63 51-123 154-218 (270)
381 COG1255 Uncharacterized protei 31.4 50 0.0011 21.9 2.2 23 38-60 23-45 (129)
382 KOG2316 Predicted ATPase (PP-l 31.3 73 0.0016 24.0 3.2 64 45-109 57-120 (277)
383 TIGR01361 DAHP_synth_Bsub phos 31.2 2.6E+02 0.0057 22.0 8.4 73 23-103 131-206 (260)
384 PRK06490 glutamine amidotransf 31.2 2.5E+02 0.0054 21.7 7.8 35 77-111 69-103 (239)
385 TIGR03249 KdgD 5-dehydro-4-deo 30.9 2.8E+02 0.0061 22.2 12.1 87 36-129 24-111 (296)
386 PRK14457 ribosomal RNA large s 30.9 3.1E+02 0.0067 22.7 8.2 74 26-108 259-334 (345)
387 cd08185 Fe-ADH1 Iron-containin 30.8 3.2E+02 0.007 22.9 7.7 64 25-99 26-91 (380)
388 PRK11613 folP dihydropteroate 30.7 2.8E+02 0.0061 22.2 7.7 57 42-107 167-225 (282)
389 cd07213 Pat17_PNPLA8_PNPLA9_li 30.6 46 0.00099 26.5 2.4 19 96-114 37-55 (288)
390 PF03205 MobB: Molybdopterin g 30.5 1.3E+02 0.0027 20.9 4.3 42 26-67 1-44 (140)
391 PF14488 DUF4434: Domain of un 30.4 2E+02 0.0044 20.7 5.4 58 36-93 18-80 (166)
392 KOG4231 Intracellular membrane 30.4 64 0.0014 27.9 3.2 54 48-114 413-471 (763)
393 PRK13398 3-deoxy-7-phosphohept 30.3 2.8E+02 0.006 21.9 9.6 74 23-103 133-208 (266)
394 PF03033 Glyco_transf_28: Glyc 30.1 55 0.0012 22.2 2.5 33 27-59 2-34 (139)
395 PRK13982 bifunctional SbtC-lik 30.0 3.8E+02 0.0082 23.5 10.3 61 24-88 180-247 (475)
396 PF06500 DUF1100: Alpha/beta h 30.0 96 0.0021 26.2 4.1 65 247-315 187-254 (411)
397 PF09695 YtfJ_HI0045: Bacteria 29.9 1.3E+02 0.0029 21.4 4.2 45 7-51 16-66 (160)
398 cd07222 Pat_PNPLA4 Patatin-lik 29.9 83 0.0018 24.4 3.7 22 96-118 34-55 (246)
399 PRK14194 bifunctional 5,10-met 29.8 1.2E+02 0.0025 24.5 4.4 35 80-114 143-183 (301)
400 COG0031 CysK Cysteine synthase 29.8 3E+02 0.0065 22.2 10.3 85 26-115 172-281 (300)
401 PRK10867 signal recognition pa 29.7 3.7E+02 0.008 23.2 9.1 69 45-123 177-247 (433)
402 COG0062 Uncharacterized conser 29.7 1.2E+02 0.0027 22.7 4.3 37 24-60 49-85 (203)
403 PF01656 CbiA: CobQ/CobB/MinD/ 29.2 82 0.0018 22.9 3.5 32 28-59 2-35 (195)
404 PF13439 Glyco_transf_4: Glyco 29.0 2E+02 0.0044 20.0 5.9 28 33-60 11-38 (177)
405 PRK07053 glutamine amidotransf 28.9 2.7E+02 0.0059 21.4 6.6 33 79-111 68-100 (234)
406 cd07211 Pat_PNPLA8 Patatin-lik 28.6 46 0.001 26.8 2.2 17 96-112 44-60 (308)
407 PLN03014 carbonic anhydrase 28.6 97 0.0021 25.4 3.8 30 79-108 206-235 (347)
408 cd00951 KDGDH 5-dehydro-4-deox 28.6 3.1E+02 0.0066 21.9 11.8 85 37-128 20-105 (289)
409 PF01734 Patatin: Patatin-like 28.4 65 0.0014 23.2 2.9 21 94-114 28-48 (204)
410 cd02065 B12-binding_like B12 b 28.2 1.8E+02 0.0039 19.2 6.7 33 26-58 2-34 (125)
411 KOG1532 GTPase XAB1, interacts 28.2 3.2E+02 0.0068 21.9 7.6 35 24-58 18-56 (366)
412 PF00484 Pro_CA: Carbonic anhy 27.7 1.9E+02 0.004 20.3 4.9 36 76-111 38-73 (153)
413 TIGR03607 patatin-related prot 27.6 96 0.0021 28.6 4.0 36 77-112 47-85 (739)
414 PF01118 Semialdhyde_dh: Semia 27.5 1.1E+02 0.0024 20.3 3.6 32 94-126 1-33 (121)
415 PRK15219 carbonic anhydrase; P 27.5 61 0.0013 25.1 2.5 32 79-110 129-160 (245)
416 COG0482 TrmU Predicted tRNA(5- 27.1 2.1E+02 0.0045 23.8 5.4 59 26-92 6-64 (356)
417 TIGR02813 omega_3_PfaA polyket 27.0 66 0.0014 34.6 3.3 30 83-112 664-693 (2582)
418 COG4667 Predicted esterase of 27.0 81 0.0017 24.7 3.0 30 94-123 40-70 (292)
419 PLN02752 [acyl-carrier protein 26.6 70 0.0015 26.2 2.9 18 96-113 127-144 (343)
420 PF09419 PGP_phosphatase: Mito 26.5 2.5E+02 0.0055 20.3 5.8 55 46-104 35-89 (168)
421 cd03145 GAT1_cyanophycinase Ty 26.5 2.7E+02 0.0059 21.0 5.8 38 23-60 28-67 (217)
422 cd04951 GT1_WbdM_like This fam 26.3 3.5E+02 0.0076 21.8 8.7 35 27-61 3-39 (360)
423 PLN00416 carbonate dehydratase 26.2 1.3E+02 0.0029 23.5 4.1 32 79-110 126-157 (258)
424 TIGR00421 ubiX_pad polyprenyl 26.2 2.7E+02 0.0058 20.4 7.6 62 24-93 112-174 (181)
425 TIGR02883 spore_cwlD N-acetylm 26.1 1.7E+02 0.0036 21.5 4.6 15 54-69 2-16 (189)
426 PRK09437 bcp thioredoxin-depen 26.0 1.7E+02 0.0036 20.4 4.5 49 10-58 17-71 (154)
427 TIGR02260 benz_CoA_red_B benzo 25.8 4.2E+02 0.0092 22.6 9.1 39 24-63 266-304 (413)
428 COG0859 RfaF ADP-heptose:LPS h 25.7 1.4E+02 0.0029 24.5 4.4 35 24-58 175-215 (334)
429 PLN03006 carbonate dehydratase 25.6 1E+02 0.0023 24.7 3.5 30 79-108 158-187 (301)
430 cd01014 nicotinamidase_related 25.5 1.8E+02 0.004 20.4 4.5 48 82-129 89-136 (155)
431 PLN02925 4-hydroxy-3-methylbut 25.4 3.7E+02 0.0081 24.8 7.0 40 54-100 632-671 (733)
432 PF11009 DUF2847: Protein of u 25.2 2.1E+02 0.0045 18.8 4.2 35 80-114 7-41 (105)
433 PF03721 UDPG_MGDP_dh_N: UDP-g 25.2 1.1E+02 0.0024 22.4 3.4 19 41-59 13-31 (185)
434 PF01075 Glyco_transf_9: Glyco 25.1 1.2E+02 0.0027 23.1 4.0 35 24-58 105-144 (247)
435 PF13383 Methyltransf_22: Meth 25.0 1.4E+02 0.003 23.1 4.0 36 24-59 192-227 (242)
436 PF06415 iPGM_N: BPG-independe 24.8 3.2E+02 0.007 20.9 6.1 54 37-95 45-98 (223)
437 cd06296 PBP1_CatR_like Ligand- 24.7 3.3E+02 0.0071 20.9 6.7 58 44-103 71-128 (270)
438 PF00091 Tubulin: Tubulin/FtsZ 24.7 2E+02 0.0044 21.6 4.9 25 82-106 113-137 (216)
439 PRK14581 hmsF outer membrane N 24.6 1.1E+02 0.0023 28.0 3.7 78 23-100 47-142 (672)
440 PF07302 AroM: AroM protein; 24.6 1.1E+02 0.0025 23.2 3.4 38 27-64 154-191 (221)
441 TIGR03127 RuMP_HxlB 6-phospho 24.5 1.6E+02 0.0035 21.2 4.3 32 27-58 32-63 (179)
442 PRK11460 putative hydrolase; P 24.5 2.3E+02 0.0051 21.6 5.3 40 24-63 148-190 (232)
443 PRK01710 murD UDP-N-acetylmura 24.5 1.4E+02 0.003 25.8 4.4 34 81-114 3-36 (458)
444 KOG4389 Acetylcholinesterase/B 24.4 2.5E+02 0.0055 24.5 5.6 114 14-130 121-257 (601)
445 PRK13255 thiopurine S-methyltr 24.4 1E+02 0.0022 23.3 3.2 16 44-59 52-67 (218)
446 PRK03846 adenylylsulfate kinas 24.2 1.9E+02 0.004 21.4 4.6 37 22-58 21-59 (198)
447 cd01983 Fer4_NifH The Fer4_Nif 24.1 1.5E+02 0.0033 18.0 3.7 19 40-58 16-34 (99)
448 PF04084 ORC2: Origin recognit 24.0 4.1E+02 0.0088 21.8 9.1 32 75-106 118-150 (326)
449 PRK13397 3-deoxy-7-phosphohept 23.9 3.6E+02 0.0078 21.1 9.3 40 23-62 121-160 (250)
450 cd00884 beta_CA_cladeB Carboni 23.4 1.3E+02 0.0029 22.2 3.6 32 79-110 73-104 (190)
451 PF03698 UPF0180: Uncharacteri 23.2 96 0.0021 19.1 2.3 21 39-59 9-29 (80)
452 TIGR03708 poly_P_AMP_trns poly 23.0 1.5E+02 0.0033 25.8 4.3 39 23-61 38-78 (493)
453 TIGR00632 vsr DNA mismatch end 23.0 1.4E+02 0.0031 20.0 3.3 14 44-57 100-113 (117)
454 PF00578 AhpC-TSA: AhpC/TSA fa 22.8 1.8E+02 0.0039 19.0 4.0 50 10-59 12-67 (124)
455 COG2185 Sbm Methylmalonyl-CoA 22.8 2.8E+02 0.006 19.5 7.3 38 22-59 10-48 (143)
456 PRK07877 hypothetical protein; 22.5 1.9E+02 0.0041 26.8 4.9 37 89-127 104-140 (722)
457 PF10929 DUF2811: Protein of u 22.5 94 0.002 17.6 2.0 18 299-316 4-21 (57)
458 COG0288 CynT Carbonic anhydras 22.4 1E+02 0.0022 23.2 2.8 35 77-111 76-110 (207)
459 PLN03049 pyridoxine (pyridoxam 22.3 1.6E+02 0.0035 25.5 4.3 35 25-59 60-94 (462)
460 cd07216 Pat17_PNPLA8_PNPLA9_li 22.1 62 0.0014 26.1 1.8 17 96-112 45-61 (309)
461 PLN02748 tRNA dimethylallyltra 22.1 5.4E+02 0.012 22.5 8.2 76 24-101 21-120 (468)
462 PRK09936 hypothetical protein; 22.1 3.9E+02 0.0083 21.5 5.8 51 36-92 36-86 (296)
463 PRK13753 dihydropteroate synth 22.0 2.7E+02 0.0059 22.2 5.1 60 45-110 158-219 (279)
464 COG3007 Uncharacterized paraqu 21.9 1.7E+02 0.0036 23.5 3.8 25 91-115 40-64 (398)
465 PRK13938 phosphoheptose isomer 21.8 2.8E+02 0.006 20.7 5.0 25 91-115 44-68 (196)
466 cd01012 YcaC_related YcaC rela 21.7 3E+02 0.0064 19.4 5.2 47 82-128 78-124 (157)
467 COG2513 PrpB PEP phosphonomuta 21.6 4.3E+02 0.0093 21.2 7.4 68 31-99 87-155 (289)
468 COG4088 Predicted nucleotide k 21.6 2.8E+02 0.0061 21.2 4.7 34 26-59 2-37 (261)
469 PRK12748 3-ketoacyl-(acyl-carr 21.5 1.7E+02 0.0038 22.4 4.2 34 27-60 7-40 (256)
470 PF00857 Isochorismatase: Isoc 21.4 2E+02 0.0044 20.5 4.2 49 81-129 101-149 (174)
471 cd07199 Pat17_PNPLA8_PNPLA9_li 21.3 1.6E+02 0.0035 22.9 3.9 18 96-113 37-54 (258)
472 PRK10964 ADP-heptose:LPS hepto 21.3 1.9E+02 0.0042 23.4 4.5 51 247-314 270-321 (322)
473 PRK06849 hypothetical protein; 21.3 5E+02 0.011 21.8 7.2 61 40-101 17-85 (389)
474 PF06792 UPF0261: Uncharacteri 21.1 2.4E+02 0.0052 23.9 4.8 43 23-65 183-225 (403)
475 PLN02918 pyridoxine (pyridoxam 21.1 1.8E+02 0.0039 25.8 4.3 34 25-58 136-169 (544)
476 KOG3179 Predicted glutamine sy 21.0 1.8E+02 0.0039 21.8 3.6 40 73-112 72-111 (245)
477 TIGR03840 TMPT_Se_Te thiopurin 20.9 1.2E+02 0.0026 22.9 3.0 16 44-59 49-64 (213)
478 PRK00091 miaA tRNA delta(2)-is 20.8 4.6E+02 0.01 21.3 7.1 64 25-90 4-89 (307)
479 PRK15454 ethanol dehydrogenase 20.8 5.2E+02 0.011 21.9 7.0 64 25-99 50-114 (395)
480 PRK05920 aromatic acid decarbo 20.7 3.8E+02 0.0082 20.2 7.3 62 24-93 130-192 (204)
481 COG0386 BtuE Glutathione perox 20.6 2.7E+02 0.006 19.8 4.3 57 9-66 11-72 (162)
482 PF08197 TT_ORF2a: pORF2a trun 20.6 61 0.0013 16.9 0.9 13 53-65 36-48 (49)
483 PRK08415 enoyl-(acyl carrier p 20.6 1.9E+02 0.0041 22.8 4.2 33 27-59 7-39 (274)
484 PF08257 Sulfakinin: Sulfakini 20.3 40 0.00086 10.9 0.2 6 291-296 2-7 (9)
485 PRK02048 4-hydroxy-3-methylbut 20.3 1.4E+02 0.003 26.7 3.5 38 56-100 518-555 (611)
486 PF13714 PEP_mutase: Phosphoen 20.3 4.2E+02 0.009 20.6 6.7 63 32-99 79-142 (238)
487 cd07214 Pat17_isozyme_like Pat 20.2 73 0.0016 26.3 1.9 19 96-114 46-64 (349)
488 PLN02154 carbonic anhydrase 20.1 1.8E+02 0.0038 23.3 3.7 32 79-110 152-183 (290)
489 KOG2170 ATPase of the AAA+ sup 20.1 1.5E+02 0.0033 23.9 3.3 29 23-51 108-138 (344)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=8.1e-47 Score=281.50 Aligned_cols=299 Identities=53% Similarity=0.973 Sum_probs=264.0
Q ss_pred CCccceEEeeCCeeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHH
Q 021184 2 EKIKHTTVATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHV 79 (316)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (316)
+.++.++++.+|++++|.+.|+ +|.|+++||++.+..+|+.+...|+..||+|+++|+||+|.|+.+.....|+...+
T Consensus 20 ~~~~hk~~~~~gI~~h~~e~g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l 99 (322)
T KOG4178|consen 20 SAISHKFVTYKGIRLHYVEGGPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDEL 99 (322)
T ss_pred hhcceeeEEEccEEEEEEeecCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHH
Confidence 4578899999999999999884 89999999999999999999999999999999999999999999998889999999
Q ss_pred HHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCc
Q 021184 80 VGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGV 159 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
+.|+..++++++.++++++||+||+++|+.+|..+|++|+++|+++.+.. .+...........+...++...++.+..
T Consensus 100 ~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~--~p~~~~~~~~~~~f~~~~y~~~fQ~~~~ 177 (322)
T KOG4178|consen 100 VGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFP--NPKLKPLDSSKAIFGKSYYICLFQEPGK 177 (322)
T ss_pred HHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCC--CcccchhhhhccccCccceeEeccccCc
Confidence 99999999999999999999999999999999999999999999998776 5666777777888888888888999999
Q ss_pred hhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhc
Q 021184 160 AEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWEL 239 (316)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
.+..+...........++....+.+...++ .....+.|+++++++.+...+...++....++++.+...+.
T Consensus 178 ~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~- 248 (322)
T KOG4178|consen 178 PETELSKDDTEMLVKTFRTRKTPGPLIVPK--------QPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWE- 248 (322)
T ss_pred chhhhccchhHHhHHhhhccccCCccccCC--------CCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCch-
Confidence 999999888888888888877665554443 11222778899999999999999999999999999999987
Q ss_pred cCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhhC
Q 021184 240 LAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 240 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
..++.+.++++|+++|+|+.|.+.+.....+ .+++..++..+.++++|+||+++.|+|+++++.|.+|++++
T Consensus 249 a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~-----~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 249 AAPWALAKITIPVLFIWGDLDPVLPYPIFGE-----LYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred hccccccccccceEEEEecCcccccchhHHH-----HHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 6677778999999999999999999873333 25566777667899999999999999999999999999874
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3e-39 Score=254.50 Aligned_cols=280 Identities=22% Similarity=0.260 Sum_probs=180.2
Q ss_pred CccceEEeeCCeeEEEEecCC-CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCC-----CCCCCH
Q 021184 3 KIKHTTVATNGINMHVASIGT-GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----ITSYTA 76 (316)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~-~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~ 76 (316)
+++.++++.+|.+++|...|+ +|+|||+||+++++..|..+++.|++. |+|+++|+||||.|+.+.. ...+++
T Consensus 7 ~~~~~~~~~~~~~i~y~~~G~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~ 85 (294)
T PLN02824 7 QVETRTWRWKGYNIRYQRAGTSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTF 85 (294)
T ss_pred CCCCceEEEcCeEEEEEEcCCCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCH
Confidence 456788999999999999994 899999999999999999999999987 7999999999999986531 135899
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcC
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQE 156 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
+++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++........... ........ .....+..
T Consensus 86 ~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~ 162 (294)
T PLN02824 86 ETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQP-WLGRPFIK--AFQNLLRE 162 (294)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccc-hhhhHHHH--HHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999865321110000 00000000 00000000
Q ss_pred CCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc-ccccceeecc-C
Q 021184 157 PGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF-TGGLNYYRCL-D 234 (316)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 234 (316)
.......+........+..++....... ..+.++..+.+......... .......... .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (294)
T PLN02824 163 TAVGKAFFKSVATPETVKNILCQCYHDD-------------------SAVTDELVEAILRPGLEPGAVDVFLDFISYSGG 223 (294)
T ss_pred hhHHHHHHHhhcCHHHHHHHHHHhccCh-------------------hhccHHHHHHHHhccCCchHHHHHHHHhccccc
Confidence 0000000000000011111111000000 00111111111111000000 0000000000 0
Q ss_pred cchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 235 LNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 235 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
...... +.++++|+|+|+|++|.++|.+..+. +.+..++. ++++++++||++++|+|+++++.|.+|++
T Consensus 224 ~~~~~~----l~~i~~P~lvi~G~~D~~~~~~~~~~------~~~~~~~~-~~~~i~~~gH~~~~e~p~~~~~~i~~fl~ 292 (294)
T PLN02824 224 PLPEEL----LPAVKCPVLIAWGEKDPWEPVELGRA------YANFDAVE-DFIVLPGVGHCPQDEAPELVNPLIESFVA 292 (294)
T ss_pred cchHHH----HhhcCCCeEEEEecCCCCCChHHHHH------HHhcCCcc-ceEEeCCCCCChhhhCHHHHHHHHHHHHh
Confidence 000111 12899999999999999999877655 55667777 99999999999999999999999999998
Q ss_pred hC
Q 021184 315 QF 316 (316)
Q Consensus 315 ~~ 316 (316)
++
T Consensus 293 ~~ 294 (294)
T PLN02824 293 RH 294 (294)
T ss_pred cC
Confidence 75
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=3.2e-38 Score=248.79 Aligned_cols=269 Identities=26% Similarity=0.428 Sum_probs=179.4
Q ss_pred ccceEEeeCCeeEEEEecCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021184 4 IKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDL 83 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
.+..+++.+|.+++|...|++|+|||+||++++...|..+++.|.+. ++|+++|+||||.|+.+. ..++.+++++|+
T Consensus 7 ~~~~~~~~~g~~i~y~~~G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~--~~~~~~~~a~dl 83 (295)
T PRK03592 7 GEMRRVEVLGSRMAYIETGEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD--IDYTFADHARYL 83 (295)
T ss_pred CcceEEEECCEEEEEEEeCCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHH
Confidence 34567888999999999999999999999999999999999999998 599999999999998765 468999999999
Q ss_pred HHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhh
Q 021184 84 VGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEED 163 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (316)
.+++++++.++++++||||||.+++.+|.++|++|+++|++++........ ......... ...+..+......
T Consensus 84 ~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~ 156 (295)
T PRK03592 84 DAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWD-DFPPAVREL------FQALRSPGEGEEM 156 (295)
T ss_pred HHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchh-hcchhHHHH------HHHHhCccccccc
Confidence 999999999999999999999999999999999999999999854321100 000000000 0001110000000
Q ss_pred hhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccc-cccccceeeccC--------
Q 021184 164 FAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKG-FTGGLNYYRCLD-------- 234 (316)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------- 234 (316)
.. ....++..++... ....++++....+...+.... ......+++...
T Consensus 157 ~~--~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (295)
T PRK03592 157 VL--EENVFIERVLPGS---------------------ILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADV 213 (295)
T ss_pred cc--chhhHHhhcccCc---------------------ccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhh
Confidence 00 0001111111100 001122333333322221111 000111111000
Q ss_pred ----cchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHH
Q 021184 235 ----LNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIY 310 (316)
Q Consensus 235 ----~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 310 (316)
..... .+.++++|+|+|+|++|.++++....++ +.+..++. ++++++++||+++.|+|+++++.|.
T Consensus 214 ~~~~~~~~~----~l~~i~~P~lii~G~~D~~~~~~~~~~~-----~~~~~~~~-~~~~i~~~gH~~~~e~p~~v~~~i~ 283 (295)
T PRK03592 214 VALVEEYAQ----WLATSDVPKLLINAEPGAILTTGAIRDW-----CRSWPNQL-EITVFGAGLHFAQEDSPEEIGAAIA 283 (295)
T ss_pred HhhhhHhHH----HhccCCCCeEEEeccCCcccCcHHHHHH-----HHHhhhhc-ceeeccCcchhhhhcCHHHHHHHHH
Confidence 00011 1237899999999999999966555443 33456788 9999999999999999999999999
Q ss_pred HHHhh
Q 021184 311 DFIKQ 315 (316)
Q Consensus 311 ~fl~~ 315 (316)
+|+++
T Consensus 284 ~fl~~ 288 (295)
T PRK03592 284 AWLRR 288 (295)
T ss_pred HHHHH
Confidence 99986
No 4
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=8.6e-38 Score=251.11 Aligned_cols=282 Identities=23% Similarity=0.312 Sum_probs=176.8
Q ss_pred eEEeeCCe-eEEEEecCCC------CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHH
Q 021184 7 TTVATNGI-NMHVASIGTG------PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHV 79 (316)
Q Consensus 7 ~~~~~~g~-~i~~~~~g~~------~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (316)
+++..+|. +++|.+.|++ |+|||+||++++...|.+++..|.+ +|+|+++|+||||.|+.+.. ..++++++
T Consensus 64 ~~~~~~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~~~~~~ 141 (360)
T PLN02679 64 KKWKWKGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSYTMETW 141 (360)
T ss_pred ceEEECCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccccHHHH
Confidence 45677787 9999999976 9999999999999999999999987 59999999999999987643 36799999
Q ss_pred HHHHHHHHHHhCcceEEEEEechhHHHHHHHHH-hCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh-cCC
Q 021184 80 VGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCL-LRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF-QEP 157 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~-~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 157 (316)
++++.++++.++.++++++||||||.+++.+++ .+|++|+++|++++.......................+...+ ..+
T Consensus 142 a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (360)
T PLN02679 142 AELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQR 221 (360)
T ss_pred HHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhch
Confidence 999999999999999999999999999999887 479999999999986532111100000000000000000000 011
Q ss_pred CchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc-ccccceeec-cCc
Q 021184 158 GVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF-TGGLNYYRC-LDL 235 (316)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 235 (316)
......+........++.++....... ..+.++..+.+......... ......... ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (360)
T PLN02679 222 GIASALFNRVKQRDNLKNILLSVYGNK-------------------EAVDDELVEIIRGPADDEGALDAFVSIVTGPPGP 282 (360)
T ss_pred hhHHHHHHHhcCHHHHHHHHHHhccCc-------------------ccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCC
Confidence 111111111111112222221110000 00111222222111111100 000000000 000
Q ss_pred chhccCCCCCccccccEEEEeeCCCcccCCCcc-hhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 236 NWELLAPWTGAQIKIPVKFMVGDLDITYHIPGI-REYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
..... +.++++|+|+|+|++|.++|++.. .+++ +.+.+.+++. ++++++++||++++|+|+++++.|.+||+
T Consensus 283 ~~~~~----l~~i~~PtLii~G~~D~~~p~~~~~~~~~--~~l~~~ip~~-~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~ 355 (360)
T PLN02679 283 NPIKL----IPRISLPILVLWGDQDPFTPLDGPVGKYF--SSLPSQLPNV-TLYVLEGVGHCPHDDRPDLVHEKLLPWLA 355 (360)
T ss_pred CHHHH----hhhcCCCEEEEEeCCCCCcCchhhHHHHH--HhhhccCCce-EEEEcCCCCCCccccCHHHHHHHHHHHHH
Confidence 00111 128999999999999999998642 1111 2256678998 99999999999999999999999999998
Q ss_pred hC
Q 021184 315 QF 316 (316)
Q Consensus 315 ~~ 316 (316)
+.
T Consensus 356 ~~ 357 (360)
T PLN02679 356 QL 357 (360)
T ss_pred hc
Confidence 63
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7.4e-38 Score=247.24 Aligned_cols=272 Identities=22% Similarity=0.340 Sum_probs=172.6
Q ss_pred ccceEEeeCC-----eeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCH
Q 021184 4 IKHTTVATNG-----INMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTA 76 (316)
Q Consensus 4 ~~~~~~~~~g-----~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~ 76 (316)
+..+++++++ .+++|.+.|+ +|+|||+||++++...|..+++.|.+.||+|+++|+||||.|+.+.....+++
T Consensus 19 ~~~~~~~~~~~~~~~~~i~y~~~G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~ 98 (302)
T PRK00870 19 FAPHYVDVDDGDGGPLRMHYVDEGPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTY 98 (302)
T ss_pred CCceeEeecCCCCceEEEEEEecCCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCH
Confidence 3456788888 8999999885 78999999999999999999999988899999999999999986553346799
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCC-CCCchhhhhhhccchhhhhhhc
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNP-ATKPVDQYRALFGDDFYICRFQ 155 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
+++++++.+++++++.++++++||||||.+++.+|.++|++|+++|++++....... .......+..... .
T Consensus 99 ~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~--------~ 170 (302)
T PRK00870 99 ARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQ--------Y 170 (302)
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccc--------c
Confidence 999999999999999999999999999999999999999999999999875322110 0000000000000 0
Q ss_pred CCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCc
Q 021184 156 EPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDL 235 (316)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
.+.. .+...+....... ..... ...+.... ...... .....+............. . ...
T Consensus 171 ~~~~------------~~~~~~~~~~~~~--~~~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~---~-~~~ 229 (302)
T PRK00870 171 SPVL------------PVGRLVNGGTVRD--LSDAV-RAAYDAPF-PDESYK-AGARAFPLLVPTSPDDPAV---A-ANR 229 (302)
T ss_pred Cchh------------hHHHHhhcccccc--CCHHH-HHHhhccc-CChhhh-cchhhhhhcCCCCCCCcch---H-HHH
Confidence 0000 0000000000000 00000 00000000 000000 0000000000000000000 0 000
Q ss_pred chhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceE---EEEEcCCCccccccchHHHHHHHHHH
Q 021184 236 NWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQE---VIVMEGVAHFINQEKADEVSSHIYDF 312 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~gH~~~~~~~~~~~~~i~~f 312 (316)
.... .+.++++|+++|+|++|.++|... ++ +.+.+++. + +++++++||++++|+|+++++.|.+|
T Consensus 230 ~~~~----~l~~i~~P~lii~G~~D~~~~~~~-~~------~~~~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~l~~f 297 (302)
T PRK00870 230 AAWA----VLERWDKPFLTAFSDSDPITGGGD-AI------LQKRIPGA-AGQPHPTIKGAGHFLQEDSGEELAEAVLEF 297 (302)
T ss_pred HHHH----hhhcCCCceEEEecCCCCcccCch-HH------HHhhcccc-cccceeeecCCCccchhhChHHHHHHHHHH
Confidence 0000 112899999999999999999754 44 55667776 5 88999999999999999999999999
Q ss_pred HhhC
Q 021184 313 IKQF 316 (316)
Q Consensus 313 l~~~ 316 (316)
|+++
T Consensus 298 l~~~ 301 (302)
T PRK00870 298 IRAT 301 (302)
T ss_pred HhcC
Confidence 9874
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=3.8e-37 Score=240.19 Aligned_cols=259 Identities=19% Similarity=0.217 Sum_probs=171.2
Q ss_pred cceEEeeCCeeEEEEec--CCC-CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 021184 5 KHTTVATNGINMHVASI--GTG-PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVG 81 (316)
Q Consensus 5 ~~~~~~~~g~~i~~~~~--g~~-~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
..++++++|.+++|... +++ ++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~--~~~~~~~~~~ 79 (276)
T TIGR02240 3 IFRTIDLDGQSIRTAVRPGKEGLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR--HPYRFPGLAK 79 (276)
T ss_pred eEEEeccCCcEEEEEEecCCCCCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC--CcCcHHHHHH
Confidence 34667889999999774 334 79999999999999999999999875 999999999999998654 4678999999
Q ss_pred HHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchh
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAE 161 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (316)
++.+++++++.++++++||||||.+++.+|.++|++|+++|+++++......... ....... ..+..
T Consensus 80 ~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~~~~~~----------~~~~~-- 146 (276)
T TIGR02240 80 LAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGK-PKVLMMM----------ASPRR-- 146 (276)
T ss_pred HHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCc-hhHHHHh----------cCchh--
Confidence 9999999999999999999999999999999999999999999987643111000 0000000 00000
Q ss_pred hhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc-ccccceeeccCcchhcc
Q 021184 162 EDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF-TGGLNYYRCLDLNWELL 240 (316)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (316)
.............++..... . .++....+......... ................
T Consensus 147 -~~~~~~~~~~~~~~~~~~~~----~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 201 (276)
T TIGR02240 147 -YIQPSHGIHIAPDIYGGAFR----R-------------------DPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIH- 201 (276)
T ss_pred -hhccccccchhhhhccceee----c-------------------cchhhhhhhhhcccCCCchHHHHHHHHcCCchhh-
Confidence 00000000000000100000 0 00000000000000000 0000000000000000
Q ss_pred CCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 241 APWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 241 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.++++++|+|+|+|++|+++|++..++ +.+..++. +++++++ ||+++.|+|+++++.|.+|+++
T Consensus 202 ---~l~~i~~P~lii~G~~D~~v~~~~~~~------l~~~~~~~-~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 202 ---WLHKIQQPTLVLAGDDDPIIPLINMRL------LAWRIPNA-ELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred ---HhhcCCCCEEEEEeCCCCcCCHHHHHH------HHHhCCCC-EEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 112899999999999999999987766 56778898 9999986 9999999999999999999986
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=6e-37 Score=239.26 Aligned_cols=267 Identities=18% Similarity=0.326 Sum_probs=172.5
Q ss_pred ccceEEeeCCeeEEEEecCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021184 4 IKHTTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDL 83 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
+++++++++|.+++|...|++|+|||+||++.+...|..+++.|.+. |+|+++|+||||.|+.+.. ..++.+++++++
T Consensus 14 ~~~~~~~~~~~~i~y~~~G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~ 91 (286)
T PRK03204 14 FESRWFDSSRGRIHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSG-FGYQIDEHARVI 91 (286)
T ss_pred ccceEEEcCCcEEEEEECCCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCc-cccCHHHHHHHH
Confidence 56778899999999999999999999999999989999999999875 9999999999999986553 357899999999
Q ss_pred HHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhh
Q 021184 84 VGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEED 163 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (316)
.+++++++.++++++||||||.+++.++..+|++|+++|++++....... .....+. .... .......
T Consensus 92 ~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~---------~~~~-~~~~~~~ 159 (286)
T PRK03204 92 GEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADT--LAMKAFS---------RVMS-SPPVQYA 159 (286)
T ss_pred HHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCc--hhHHHHH---------HHhc-cccchhh
Confidence 99999999999999999999999999999999999999998765422110 0000000 0000 0000000
Q ss_pred hhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccccccc----ceeeccC-cchh
Q 021184 164 FAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGL----NYYRCLD-LNWE 238 (316)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~ 238 (316)
.. ....+...++...... ..++.....+............. ..+.... ....
T Consensus 160 ~~--~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (286)
T PRK03204 160 IL--RRNFFVERLIPAGTEH---------------------RPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR 216 (286)
T ss_pred hh--hhhHHHHHhccccccC---------------------CCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH
Confidence 00 0011112222110000 01111111111100000000000 0000000 0000
Q ss_pred ccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHH
Q 021184 239 LLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 313 (316)
Q Consensus 239 ~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
.........+++|+|+|+|++|.++++....+ .+++.+|+. ++++++++||++++|+|+++++.|.+||
T Consensus 217 ~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~-----~~~~~ip~~-~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 217 LAREVPATLGTKPTLLVWGMKDVAFRPKTILP-----RLRATFPDH-VLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred hhhhhhhhcCCCCeEEEecCCCcccCcHHHHH-----HHHHhcCCC-eEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 00000000238999999999999987654322 166788998 9999999999999999999999999997
No 8
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=6.7e-36 Score=234.65 Aligned_cols=260 Identities=21% Similarity=0.267 Sum_probs=161.9
Q ss_pred CeeEEEEecCCCCeEEEEccCCCChhhHHH---HHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021184 13 GINMHVASIGTGPAVLFLHGFPELWYSWRK---QLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE 89 (316)
Q Consensus 13 g~~i~~~~~g~~~~vv~~hG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 89 (316)
|.+++|...|++|+|||+||++.+...|.. .+..|.+.||+|+++|+||||.|+........+ ...++++.++++.
T Consensus 19 ~~~~~y~~~g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~-~~~~~~l~~~l~~ 97 (282)
T TIGR03343 19 NFRIHYNEAGNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRG-LVNARAVKGLMDA 97 (282)
T ss_pred ceeEEEEecCCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCccccc-chhHHHHHHHHHH
Confidence 577999999999999999999988877764 355677778999999999999998654211222 2568899999999
Q ss_pred hCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCC-CCchhhhhhhccchhhhhhhcCCCchhhhhhhhh
Q 021184 90 FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPA-TKPVDQYRALFGDDFYICRFQEPGVAEEDFAQID 168 (316)
Q Consensus 90 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (316)
++.++++++||||||.+++.+|.++|++++++|++++........ .......... ...+..+.
T Consensus 98 l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---------- 161 (282)
T TIGR03343 98 LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLL------FKLYAEPS---------- 161 (282)
T ss_pred cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHH------HHHhcCCC----------
Confidence 999999999999999999999999999999999999753221100 0000000000 00000000
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccc
Q 021184 169 TARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQI 248 (316)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (316)
......++..................... ..........+....... .+........ ++++
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~------l~~i 222 (282)
T TIGR03343 162 -YETLKQMLNVFLFDQSLITEELLQGRWEN-----IQRQPEHLKNFLISSQKA-------PLSTWDVTAR------LGEI 222 (282)
T ss_pred -HHHHHHHHhhCccCcccCcHHHHHhHHHH-----hhcCHHHHHHHHHhcccc-------ccccchHHHH------HhhC
Confidence 00011111100000000000000000000 000001111111000000 0000111111 1289
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
++|+|+++|++|.+++++.+++ +++.+|++ ++++++++||+++.|+|+++++.|.+||++
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~------~~~~~~~~-~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLK------LLWNMPDA-QLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHH------HHHhCCCC-EEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 9999999999999999887766 56778999 999999999999999999999999999963
No 9
>PLN02578 hydrolase
Probab=100.00 E-value=7e-35 Score=234.18 Aligned_cols=273 Identities=18% Similarity=0.222 Sum_probs=172.7
Q ss_pred eEEeeCCeeEEEEecCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021184 7 TTVATNGINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGL 86 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
.+++.+|.+++|...|++|+||++||++++...|..++..|++. |+|+++|+||||.|+.+. ..++...+++++.++
T Consensus 69 ~~~~~~~~~i~Y~~~g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~--~~~~~~~~a~~l~~~ 145 (354)
T PLN02578 69 NFWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL--IEYDAMVWRDQVADF 145 (354)
T ss_pred eEEEECCEEEEEEEcCCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc--cccCHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999875 999999999999998765 568999999999999
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchh-------hhhhhccchhhhhhhcCCCc
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVD-------QYRALFGDDFYICRFQEPGV 159 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 159 (316)
++.+..++++++|||+||.+++.+|.++|++++++|++++............. .....+.... ...+....
T Consensus 146 i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~- 223 (354)
T PLN02578 146 VKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPL-KEWFQRVV- 223 (354)
T ss_pred HHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHH-HHHHHHHH-
Confidence 99998899999999999999999999999999999999876532211110000 0000000000 00000000
Q ss_pred hhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc-ccccc----eeec-c
Q 021184 160 AEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF-TGGLN----YYRC-L 233 (316)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~-~ 233 (316)
....+........+...+...... .....+...+.+......... ..... +... .
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (354)
T PLN02578 224 LGFLFWQAKQPSRIESVLKSVYKD-------------------KSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQS 284 (354)
T ss_pred HHHHHHHhcCHHHHHHHHHHhcCC-------------------cccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCC
Confidence 000000000000111111000000 000011111111100000000 00000 0000 0
Q ss_pred CcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHH
Q 021184 234 DLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 313 (316)
Q Consensus 234 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
....... +.++++|+++|+|++|.++|.+..++ +++..|+. +++++ ++||+++.|+|+++++.|.+|+
T Consensus 285 ~~~~~~~----l~~i~~PvLiI~G~~D~~v~~~~~~~------l~~~~p~a-~l~~i-~~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 285 RYTLDSL----LSKLSCPLLLLWGDLDPWVGPAKAEK------IKAFYPDT-TLVNL-QAGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred CCCHHHH----hhcCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-EEEEe-CCCCCccccCHHHHHHHHHHHH
Confidence 0000111 12899999999999999999887665 66778898 99989 5899999999999999999999
Q ss_pred hh
Q 021184 314 KQ 315 (316)
Q Consensus 314 ~~ 315 (316)
+.
T Consensus 353 ~~ 354 (354)
T PLN02578 353 SS 354 (354)
T ss_pred hC
Confidence 63
No 10
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.3e-35 Score=241.06 Aligned_cols=287 Identities=18% Similarity=0.199 Sum_probs=169.5
Q ss_pred cceEEeeCCeeEEEEecCC-----CCeEEEEccCCCChhhHHH-HHHHHh---hCCceEEecCCCCCCCCCCCCCCCCCC
Q 021184 5 KHTTVATNGINMHVASIGT-----GPAVLFLHGFPELWYSWRK-QLLYLS---SRGYRAIAPDLRGYGDTDAPPSITSYT 75 (316)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~-----~~~vv~~hG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~ 75 (316)
...+.+.+|.+++|...|+ +|+|||+||++++...|.. ++..|. +.+|+|+++|+||||.|+.+.. ..++
T Consensus 177 ~~~~~~~~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~yt 255 (481)
T PLN03087 177 CTSWLSSSNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SLYT 255 (481)
T ss_pred eeeeEeeCCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-CcCC
Confidence 4456778899999999874 3799999999999999985 446555 3689999999999999986643 4589
Q ss_pred HHHHHHHHH-HHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh
Q 021184 76 ALHVVGDLV-GLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF 154 (316)
Q Consensus 76 ~~~~~~~~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
++++++++. .+++.++.++++++||||||.+++.+|.++|++|+++|+++++.................... ...+
T Consensus 256 l~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 332 (481)
T PLN03087 256 LREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAP---RRVW 332 (481)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcc---cccC
Confidence 999999995 889999999999999999999999999999999999999998654322111000000000000 0000
Q ss_pred cCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeec--
Q 021184 155 QEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRC-- 232 (316)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (316)
.+.......... . ..+.............. ...+...... ........+.+..................
T Consensus 333 -~~~~~~~~~~~w-~-~~~~~~~~~~~~~~~~~-~~~~~~l~~~-----~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~ 403 (481)
T PLN03087 333 -PPIAFGASVACW-Y-EHISRTICLVICKNHRL-WEFLTRLLTR-----NRMRTFLIEGFFCHTHNAAWHTLHNIICGSG 403 (481)
T ss_pred -CccccchhHHHH-H-HHHHhhhhcccccchHH-HHHHHHHhhh-----hhhhHHHHHHHHhccchhhHHHHHHHHhchh
Confidence 000000000000 0 00000000000000000 0000000000 00000000000000000000000000000
Q ss_pred --cCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc-cchHHHHHHH
Q 021184 233 --LDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ-EKADEVSSHI 309 (316)
Q Consensus 233 --~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i 309 (316)
........ ..+|++|+|+|+|++|.++|++..+. +++.+|++ ++++++++||++++ ++|+++++.|
T Consensus 404 ~~l~~~l~~l----~~~I~vPtLII~Ge~D~ivP~~~~~~------la~~iP~a-~l~vI~~aGH~~~v~e~p~~fa~~L 472 (481)
T PLN03087 404 SKLDGYLDHV----RDQLKCDVAIFHGGDDELIPVECSYA------VKAKVPRA-RVKVIDDKDHITIVVGRQKEFAREL 472 (481)
T ss_pred hhhhhHHHHH----HHhCCCCEEEEEECCCCCCCHHHHHH------HHHhCCCC-EEEEeCCCCCcchhhcCHHHHHHHH
Confidence 00000000 01689999999999999999987766 67889999 99999999999985 9999999999
Q ss_pred HHHHhh
Q 021184 310 YDFIKQ 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
.+|++.
T Consensus 473 ~~F~~~ 478 (481)
T PLN03087 473 EEIWRR 478 (481)
T ss_pred HHHhhc
Confidence 999864
No 11
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.7e-35 Score=228.06 Aligned_cols=245 Identities=14% Similarity=0.162 Sum_probs=158.0
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc-ceEEEEEechhH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI-EQVFLVGHDWGA 104 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 104 (316)
+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+.. ..++.+++++|+.++++.++. ++++++||||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~-~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG 83 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSN-TVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGG 83 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCcc-ccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcch
Confidence 599999999999999999999987789999999999999976542 367899999999999999987 499999999999
Q ss_pred HHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccch-hhhhh-hcCCCchhhhhhh-hhHHHHHHHHhcCCC
Q 021184 105 LIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDD-FYICR-FQEPGVAEEDFAQ-IDTARLIKKFLGGRS 181 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 181 (316)
.+++.+|.++|++|+++|++++....... ............. ..... ..... ...... ..........+...
T Consensus 84 ~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~- 158 (255)
T PLN02965 84 GSVTEALCKFTDKISMAIYVAAAMVKPGS--IISPRLKNVMEGTEKIWDYTFGEGP--DKPPTGIMMKPEFVRHYYYNQ- 158 (255)
T ss_pred HHHHHHHHhCchheeEEEEEccccCCCCC--CccHHHHhhhhccccceeeeeccCC--CCCcchhhcCHHHHHHHHhcC-
Confidence 99999999999999999999986432110 0001110000000 00000 00000 000000 00000000000000
Q ss_pred CCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEeeCCCc
Q 021184 182 PKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDI 261 (316)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~ 261 (316)
...+........+........ .... .... .+..+++|+++|+|++|.
T Consensus 159 ------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~----~~~~i~vP~lvi~g~~D~ 205 (255)
T PLN02965 159 ------------------------SPLEDYTLSSKLLRPAPVRAF----QDLD-KLPP----NPEAEKVPRVYIKTAKDN 205 (255)
T ss_pred ------------------------CCHHHHHHHHHhcCCCCCcch----hhhh-hccc----hhhcCCCCEEEEEcCCCC
Confidence 000111111111111111100 0000 0000 112689999999999999
Q ss_pred ccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhhC
Q 021184 262 TYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 262 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
++|++..+. +++..+++ ++++++++||++++|+|+++++.|.+|++++
T Consensus 206 ~~~~~~~~~------~~~~~~~a-~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 206 LFDPVRQDV------MVENWPPA-QTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred CCCHHHHHH------HHHhCCcc-eEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 999876655 77889999 9999999999999999999999999999863
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=1.4e-34 Score=226.90 Aligned_cols=265 Identities=23% Similarity=0.343 Sum_probs=173.4
Q ss_pred ceEEeeCCeeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 021184 6 HTTVATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDL 83 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
.++++++|.+++|.+.|+ +|+|||+||++++...|..+++.|++ +|+|+++|+||||.|+.+.. ..++++++++|+
T Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~l 85 (278)
T TIGR03056 8 SRRVTVGPFHWHVQDMGPTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFR-FRFTLPSMAEDL 85 (278)
T ss_pred cceeeECCEEEEEEecCCCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccc-cCCCHHHHHHHH
Confidence 467889999999999986 78999999999999999999999987 49999999999999987653 367999999999
Q ss_pred HHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCC-chhhhhhhccchhhhhhhcCCCchhh
Q 021184 84 VGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATK-PVDQYRALFGDDFYICRFQEPGVAEE 162 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
.+++++++.++++++||||||.+++.+|.++|++++++|++++.......... ....+...+ ...+.. ..
T Consensus 86 ~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~ 156 (278)
T TIGR03056 86 SALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVL--------ACNPFT-PP 156 (278)
T ss_pred HHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhh--------hhcccc-hH
Confidence 99999999889999999999999999999999999999999886542111000 000000000 000000 00
Q ss_pred hhhhh-hHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccc-cccccceeeccCc-chhc
Q 021184 163 DFAQI-DTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKG-FTGGLNYYRCLDL-NWEL 239 (316)
Q Consensus 163 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 239 (316)
..... .....+..++.... ..........+........ ............. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (278)
T TIGR03056 157 MMSRGAADQQRVERLIRDTG----------------------SLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNR 214 (278)
T ss_pred HHHhhcccCcchhHHhhccc----------------------cccccchhhHHHHhhcCchhhhHHHHHhhcccccchhh
Confidence 00000 00000000000000 0000011111111000000 0000000000000 0001
Q ss_pred cCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 240 LAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 240 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.++++++|+|+|+|++|.++|++..+. +.+..++. +++.++++||+++.|+|+++++.|.+|++
T Consensus 215 ----~~~~i~~P~lii~g~~D~~vp~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 215 ----DLPRITIPLHLIAGEEDKAVPPDESKR------AATRVPTA-TLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred ----hcccCCCCEEEEEeCCCcccCHHHHHH------HHHhccCC-eEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 122789999999999999999877665 56778888 99999999999999999999999999985
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.5e-35 Score=226.93 Aligned_cols=245 Identities=19% Similarity=0.236 Sum_probs=155.0
Q ss_pred EEEEecCCCC-eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcce
Q 021184 16 MHVASIGTGP-AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQ 94 (316)
Q Consensus 16 i~~~~~g~~~-~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (316)
++|...|+++ +|||+||++++...|..+++.|.+. |+|+++|+||||.|.... .++.+++++++.+ +..++
T Consensus 4 ~~y~~~G~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~---~~~~~~~~~~l~~----~~~~~ 75 (256)
T PRK10349 4 IWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGFG---ALSLADMAEAVLQ----QAPDK 75 (256)
T ss_pred cchhhcCCCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCCC---CCCHHHHHHHHHh----cCCCC
Confidence 6788889886 6999999999999999999999876 999999999999997543 4677777776653 46689
Q ss_pred EEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHH
Q 021184 95 VFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIK 174 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (316)
++++||||||.+++.+|.++|++|+++|++++.+......... ........ . +..... ......++
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~-~~~~~~~~-~-~~~~~~-----------~~~~~~~~ 141 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWP-GIKPDVLA-G-FQQQLS-----------DDFQRTVE 141 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCC-cccHHHHH-H-HHHHHH-----------hchHHHHH
Confidence 9999999999999999999999999999998854321110000 00000000 0 000000 00001111
Q ss_pred HHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccc------cccceeeccCcchhccCCCCCccc
Q 021184 175 KFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFT------GGLNYYRCLDLNWELLAPWTGAQI 248 (316)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i 248 (316)
.++........ ........+.......... .....+...+.... +.++
T Consensus 142 ~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i 195 (256)
T PRK10349 142 RFLALQTMGTE--------------------TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQP------LQNV 195 (256)
T ss_pred HHHHHHHccCc--------------------hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHH------Hhhc
Confidence 11100000000 0000000000000000000 00000011111111 1289
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
++|+|+|+|++|.++|.+..+. +++..+++ ++++++++||++++|+|++|++.+.+|-++
T Consensus 196 ~~P~lii~G~~D~~~~~~~~~~------~~~~i~~~-~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 196 SMPFLRLYGYLDGLVPRKVVPM------LDKLWPHS-ESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred CCCeEEEecCCCccCCHHHHHH------HHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 9999999999999998876654 66778999 999999999999999999999999998654
No 14
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=233.78 Aligned_cols=119 Identities=25% Similarity=0.364 Sum_probs=100.3
Q ss_pred eeCCeeEEEEecCC---------CCeEEEEccCCCChhhHH--HHHHHH-------hhCCceEEecCCCCCCCCCCCCCC
Q 021184 10 ATNGINMHVASIGT---------GPAVLFLHGFPELWYSWR--KQLLYL-------SSRGYRAIAPDLRGYGDTDAPPSI 71 (316)
Q Consensus 10 ~~~g~~i~~~~~g~---------~~~vv~~hG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~ 71 (316)
+++|.+++|...|+ +|+|||+||++++...|. .+.+.| ..++|+|+++|+||||.|+.+.+.
T Consensus 46 ~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 46 TLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred CcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcC
Confidence 46789999999987 789999999999988875 455544 235699999999999999865421
Q ss_pred -----CCCCHHHHHHHHHHHH-HHhCcceEE-EEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 72 -----TSYTALHVVGDLVGLL-DEFGIEQVF-LVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 72 -----~~~~~~~~~~~~~~~~-~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
..++++++++++.+++ +++++++++ ++||||||++|+.+|.++|++|+++|++++..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 2478999999988855 889999985 89999999999999999999999999998754
No 15
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=7.3e-34 Score=228.37 Aligned_cols=260 Identities=16% Similarity=0.200 Sum_probs=163.7
Q ss_pred eEEeeCCeeEEEEecCC-----CCeEEEEccCCCChhh-HHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 021184 7 TTVATNGINMHVASIGT-----GPAVLFLHGFPELWYS-WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVV 80 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~-----~~~vv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
..++.+|.+++|..+++ .++|||+||++++... |..++..|++.||+|+++|+||||.|+.... ...++++++
T Consensus 65 ~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~-~~~~~~~~~ 143 (349)
T PLN02385 65 YEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHG-YIPSFDDLV 143 (349)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCC-CcCCHHHHH
Confidence 34566899999888753 4689999999988764 6888999998899999999999999986542 235889999
Q ss_pred HHHHHHHHHhCcc------eEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCC--chhhhhhhccchhhhh
Q 021184 81 GDLVGLLDEFGIE------QVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATK--PVDQYRALFGDDFYIC 152 (316)
Q Consensus 81 ~~~~~~~~~~~~~------~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 152 (316)
+|+.++++.++.+ +++++||||||.+++.++.++|++++++|+++|.......... ....+...+.......
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 223 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKA 223 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCc
Confidence 9999999887542 7999999999999999999999999999999986543221111 0111100000000000
Q ss_pred hhcCCCchhh-hhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceee
Q 021184 153 RFQEPGVAEE-DFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYR 231 (316)
Q Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (316)
.......... .+..... .......... . ............+.
T Consensus 224 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------~---------~~~~~~~~~~~~l~------------ 266 (349)
T PLN02385 224 KLVPQKDLAELAFRDLKK-RKMAEYNVIA---------------Y---------KDKPRLRTAVELLR------------ 266 (349)
T ss_pred eecCCCccccccccCHHH-HHHhhcCcce---------------e---------CCCcchHHHHHHHH------------
Confidence 0000000000 0000000 0000000000 0 00000001111000
Q ss_pred ccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccC--CCceEEEEEcCCCccccccchHH----H
Q 021184 232 CLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDV--PGLQEVIVMEGVAHFINQEKADE----V 305 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~gH~~~~~~~~~----~ 305 (316)
.. ...... +.++++|+|+|+|++|.++|++.++.++ +.. ++. ++++++++||.++.++|++ +
T Consensus 267 ~~-~~~~~~----l~~i~~P~Lii~G~~D~vv~~~~~~~l~------~~~~~~~~-~l~~i~~~gH~l~~e~p~~~~~~v 334 (349)
T PLN02385 267 TT-QEIEMQ----LEEVSLPLLILHGEADKVTDPSVSKFLY------EKASSSDK-KLKLYEDAYHSILEGEPDEMIFQV 334 (349)
T ss_pred HH-HHHHHh----cccCCCCEEEEEeCCCCccChHHHHHHH------HHcCCCCc-eEEEeCCCeeecccCCChhhHHHH
Confidence 00 000001 1278999999999999999998877643 433 567 9999999999999999887 8
Q ss_pred HHHHHHHHhhC
Q 021184 306 SSHIYDFIKQF 316 (316)
Q Consensus 306 ~~~i~~fl~~~ 316 (316)
.+.|.+||+++
T Consensus 335 ~~~i~~wL~~~ 345 (349)
T PLN02385 335 LDDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHHh
Confidence 88899999864
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=223.26 Aligned_cols=265 Identities=25% Similarity=0.335 Sum_probs=171.0
Q ss_pred eEEeeCCeeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC--CCCCHHHHHHH
Q 021184 7 TTVATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI--TSYTALHVVGD 82 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~ 82 (316)
..++.+|.+++|.+.|+ +|+|||+||++.+...|..++..|++ +|+|+++|+||||.|+.+... ..+++++++++
T Consensus 108 ~~~~~~~~~~~y~~~G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~ 186 (383)
T PLN03084 108 SQASSDLFRWFCVESGSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSS 186 (383)
T ss_pred eEEcCCceEEEEEecCCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHH
Confidence 45678999999999985 68999999999999999999999987 699999999999999876531 35799999999
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhh
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEE 162 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (316)
+.+++++++.++++++|||+||.+++.+|.++|++|+++|+++++....... ....+... ... .. ..
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~--~p~~l~~~-~~~-l~---------~~ 253 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAK--LPSTLSEF-SNF-LL---------GE 253 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCcccccc--chHHHHHH-HHH-Hh---------hh
Confidence 9999999999999999999999999999999999999999999864321100 00000000 000 00 00
Q ss_pred hhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc-----ccccceeec-cCc-
Q 021184 163 DFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF-----TGGLNYYRC-LDL- 235 (316)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~- 235 (316)
.+.. .........+... .. ....++....+...+...+. ......+.. ...
T Consensus 254 ~~~~-~~~~~~~~~~~~~--~~-------------------~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~ 311 (383)
T PLN03084 254 IFSQ-DPLRASDKALTSC--GP-------------------YAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKY 311 (383)
T ss_pred hhhc-chHHHHhhhhccc--Cc-------------------cCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchh
Confidence 0000 0000000001000 00 00111111111111111000 000000000 000
Q ss_pred chhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 236 NWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
...........++++|+|+|+|+.|.+++.+..++ +++. ++. ++++++++||++++|+|+++++.|.+||.+
T Consensus 312 ~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~------~a~~-~~a-~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 312 IEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED------FCKS-SQH-KLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred hHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH------HHHh-cCC-eEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 00000000001689999999999999999877655 3343 477 999999999999999999999999999964
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=1.2e-33 Score=218.65 Aligned_cols=236 Identities=19% Similarity=0.247 Sum_probs=156.6
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEech
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
++|+|||+||++++...|..++..|.+. |+|+++|+||||.|.... .++++++++|+.+++++++.++++++||||
T Consensus 15 ~~~~iv~lhG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~s~~~~---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~ 90 (255)
T PRK10673 15 NNSPIVLVHGLFGSLDNLGVLARDLVND-HDIIQVDMRNHGLSPRDP---VMNYPAMAQDLLDTLDALQIEKATFIGHSM 90 (255)
T ss_pred CCCCEEEECCCCCchhHHHHHHHHHhhC-CeEEEECCCCCCCCCCCC---CCCHHHHHHHHHHHHHHcCCCceEEEEECH
Confidence 3689999999999999999999999874 999999999999998654 578999999999999999999999999999
Q ss_pred hHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCCCC
Q 021184 103 GALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSP 182 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
||.+++.+|.++|++|+++|++++.+..... .........+ .......... .......+...+.
T Consensus 91 Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~--~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~---- 154 (255)
T PRK10673 91 GGKAVMALTALAPDRIDKLVAIDIAPVDYHV--RRHDEIFAAI------NAVSEAGATT----RQQAAAIMRQHLN---- 154 (255)
T ss_pred HHHHHHHHHHhCHhhcceEEEEecCCCCccc--hhhHHHHHHH------HHhhhccccc----HHHHHHHHHHhcC----
Confidence 9999999999999999999999864422110 0000000000 0000000000 0000000000000
Q ss_pred CCCCCCccccccCCCCCCCCCCCCChHHHHH-HHHhhcccccccc----cceeeccCcchhccCCCCCccccccEEEEee
Q 021184 183 KPPCVPKEIGFRGLPDLRTLPSWLSEEDVNY-YASKFSQKGFTGG----LNYYRCLDLNWELLAPWTGAQIKIPVKFMVG 257 (316)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G 257 (316)
...... ....+........ ...+..... ....+.+++|+|+|+|
T Consensus 155 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~P~l~i~G 203 (255)
T PRK10673 155 -------------------------EEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVG------WEKIPAWPHPALFIRG 203 (255)
T ss_pred -------------------------CHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhC------CcccCCCCCCeEEEEC
Confidence 000000 0000000000000 000000000 0011278999999999
Q ss_pred CCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhhC
Q 021184 258 DLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
++|..++++..+. +++..++. ++++++++||++++++|+++++.|.+||+++
T Consensus 204 ~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 204 GNSPYVTEAYRDD------LLAQFPQA-RAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred CCCCCCCHHHHHH------HHHhCCCc-EEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 9999999876655 66788998 9999999999999999999999999999864
No 18
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=8e-34 Score=220.17 Aligned_cols=251 Identities=19% Similarity=0.307 Sum_probs=159.9
Q ss_pred EEEEecCC----CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021184 16 MHVASIGT----GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG 91 (316)
Q Consensus 16 i~~~~~g~----~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
++|...|+ +|+||++||++++...|..+++.|.+ +|+|+++|+||||.|..... ..++++++++++.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~ 78 (257)
T TIGR03611 1 MHYELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELP-PGYSIAHMADDVLQLLDALN 78 (257)
T ss_pred CEEEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCc-ccCCHHHHHHHHHHHHHHhC
Confidence 35666663 68999999999999999999988876 59999999999999976543 56799999999999999999
Q ss_pred cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHH
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTAR 171 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (316)
.++++++||||||++++.+|.++|++++++|++++......... ...... ........... +.......
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~-----~~~~~~~~ 147 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR---RCFDVR---IALLQHAGPEA-----YVHAQALF 147 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH---HHHHHH---HHHHhccCcch-----hhhhhhhh
Confidence 99999999999999999999999999999999987543311100 000000 00000000000 00000000
Q ss_pred HH-HHHhcCCCCCCCCCCccccccCCCCCCCCCCCCCh-HHHHHHHHhhcccccccccceeeccCcchhccCCCCCcccc
Q 021184 172 LI-KKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSE-EDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIK 249 (316)
Q Consensus 172 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (316)
.. ..++...... ..... ... ....... ...... .. ....+.... +++++
T Consensus 148 ~~~~~~~~~~~~~---~~~~~-~~~------~~~~~~~~~~~~~~-~~------------~~~~~~~~~------~~~i~ 198 (257)
T TIGR03611 148 LYPADWISENAAR---LAADE-AHA------LAHFPGKANVLRRI-NA------------LEAFDVSAR------LDRIQ 198 (257)
T ss_pred hccccHhhccchh---hhhhh-hhc------ccccCccHHHHHHH-HH------------HHcCCcHHH------hcccC
Confidence 00 0000000000 00000 000 0000000 000000 00 000011111 12789
Q ss_pred ccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 250 IPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 250 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+|+++++|++|.++|++.+.+ +.+..++. +++.++++||.+++++|+++.+.|.+||++
T Consensus 199 ~P~l~i~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 199 HPVLLIANRDDMLVPYTQSLR------LAAALPNA-QLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred ccEEEEecCcCcccCHHHHHH------HHHhcCCc-eEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 999999999999999887665 45677888 999999999999999999999999999974
No 19
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.1e-32 Score=219.61 Aligned_cols=274 Identities=15% Similarity=0.112 Sum_probs=170.0
Q ss_pred cceEEeeCCeeEEEEecCC---CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC----CCCCHH
Q 021184 5 KHTTVATNGINMHVASIGT---GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI----TSYTAL 77 (316)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g~---~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~----~~~~~~ 77 (316)
+..++..+|.+++|...+. +++||++||++++...|..++..|++.||+|+++|+||||.|+..... ...+++
T Consensus 32 ~~~~~~~~g~~l~~~~~~~~~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~ 111 (330)
T PRK10749 32 EAEFTGVDDIPIRFVRFRAPHHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFN 111 (330)
T ss_pred ceEEEcCCCCEEEEEEccCCCCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHH
Confidence 3456677999999998763 579999999999999999999999999999999999999999754321 125889
Q ss_pred HHHHHHHHHHHHh----CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhh
Q 021184 78 HVVGDLVGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICR 153 (316)
Q Consensus 78 ~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
++++|+.++++.+ +..+++++||||||.+++.+|.++|+.++++|+++|........... .....
T Consensus 112 ~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~--~~~~~--------- 180 (330)
T PRK10749 112 DYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSW--MARRI--------- 180 (330)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcH--HHHHH---------
Confidence 9999999999886 56789999999999999999999999999999999865432110000 00000
Q ss_pred hcCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCC--hHHHHHHHHhhcccccc----ccc
Q 021184 154 FQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLS--EEDVNYYASKFSQKGFT----GGL 227 (316)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~ 227 (316)
. ...... ........... ..+ ........+++ ++....+...+...... ...
T Consensus 181 ---------------~-~~~~~~-~~~~~~~~~~~----~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (330)
T PRK10749 181 ---------------L-NWAEGH-PRIRDGYAIGT----GRW-RPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTY 238 (330)
T ss_pred ---------------H-HHHHHh-cCCCCcCCCCC----CCC-CCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcH
Confidence 0 000000 00000000000 000 00000011111 11111222222111110 001
Q ss_pred ceeeccCcc-hhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccc---cCCCceEEEEEcCCCccccccch-
Q 021184 228 NYYRCLDLN-WELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKK---DVPGLQEVIVMEGVAHFINQEKA- 302 (316)
Q Consensus 228 ~~~~~~~~~-~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~gH~~~~~~~- 302 (316)
.+....... .... ....++++|+|+|+|++|.+++++.++.+.+ .+.+ ..++. +++++|++||.++.|.+
T Consensus 239 ~~~~~~~~~~~~~~--~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~--~l~~~~~~~~~~-~l~~~~gagH~~~~E~~~ 313 (330)
T PRK10749 239 HWVRESILAGEQVL--AGAGDITTPLLLLQAEEERVVDNRMHDRFCE--ARTAAGHPCEGG-KPLVIKGAYHEILFEKDA 313 (330)
T ss_pred HHHHHHHHHHHHHH--hhccCCCCCEEEEEeCCCeeeCHHHHHHHHH--HHhhcCCCCCCc-eEEEeCCCcchhhhCCcH
Confidence 000100000 0000 0112789999999999999999987766432 1211 12455 89999999999988764
Q ss_pred --HHHHHHHHHHHhhC
Q 021184 303 --DEVSSHIYDFIKQF 316 (316)
Q Consensus 303 --~~~~~~i~~fl~~~ 316 (316)
+.+.+.|.+||+++
T Consensus 314 ~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 314 MRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 67899999999874
No 20
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=4.8e-33 Score=213.52 Aligned_cols=100 Identities=25% Similarity=0.256 Sum_probs=90.7
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechh
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWG 103 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+. ..+++++++++.++++.++.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS---VDGFADVSRLLSQTLQSYNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc---ccCHHHHHHHHHHHHHHcCCCCeEEEEECHH
Confidence 578999999999999999999988 3 5999999999999998655 3489999999999999999999999999999
Q ss_pred HHHHHHHHHhCccc-cceeeeecccc
Q 021184 104 ALIAWYFCLLRPDR-VKALVNLSVVF 128 (316)
Q Consensus 104 g~~a~~~a~~~p~~-v~~~il~~~~~ 128 (316)
|.+++.+|.++|+. |++++++++..
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCC
Confidence 99999999999764 99999987654
No 21
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=2.8e-32 Score=210.83 Aligned_cols=260 Identities=17% Similarity=0.146 Sum_probs=164.2
Q ss_pred eeCCeeEEEEec-CCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021184 10 ATNGINMHVASI-GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD 88 (316)
Q Consensus 10 ~~~g~~i~~~~~-g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+.||.+++|.+. +++|+|||+||++++...|..++..|.+.||+|+++|+||||.|..... ..++++++++++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~-~~~~~~~~~~~l~~~i~ 81 (273)
T PLN02211 3 EENGEEVTDMKPNRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDAD-SVTTFDEYNKPLIDFLS 81 (273)
T ss_pred cccccccccccccCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcc-cCCCHHHHHHHHHHHHH
Confidence 457888988887 5588999999999999999999999988899999999999998854432 34799999999999999
Q ss_pred HhC-cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh-c---CCCchhhh
Q 021184 89 EFG-IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF-Q---EPGVAEED 163 (316)
Q Consensus 89 ~~~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~ 163 (316)
.++ .++++++||||||.+++.++.++|++|+++|++++...... ......+...+......... . ........
T Consensus 82 ~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (273)
T PLN02211 82 SLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLG--FQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPP 159 (273)
T ss_pred hcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCC--CCHHHHHhccccchhhhccceeeeeccCCCCCC
Confidence 985 57999999999999999999999999999999987532111 00000000000000000000 0 00000000
Q ss_pred hhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCC
Q 021184 164 FAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPW 243 (316)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (316)
........+...++.. ....+................ +........
T Consensus 160 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~----- 205 (273)
T PLN02211 160 TSAIIKKEFRRKILYQ-------------------------MSPQEDSTLAAMLLRPGPILA----LRSARFEEE----- 205 (273)
T ss_pred ceeeeCHHHHHHHHhc-------------------------CCCHHHHHHHHHhcCCcCccc----ccccccccc-----
Confidence 0000000000000000 011111111111111111110 110000000
Q ss_pred CCccc-cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 244 TGAQI-KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 244 ~~~~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
..++ ++|+++|.|++|..+|++..+. +.+..++. +++.++ +||.+++++|+++.+.|.++...
T Consensus 206 -~~~~~~vP~l~I~g~~D~~ip~~~~~~------m~~~~~~~-~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 206 -TGDIDKVPRVYIKTLHDHVVKPEQQEA------MIKRWPPS-QVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred -ccccCccceEEEEeCCCCCCCHHHHHH------HHHhCCcc-EEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 0144 8999999999999999987665 56777888 899997 79999999999999999988653
No 22
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=2.7e-32 Score=213.25 Aligned_cols=252 Identities=16% Similarity=0.161 Sum_probs=158.5
Q ss_pred ceEEeeCCeeEEEEecCC----CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 021184 6 HTTVATNGINMHVASIGT----GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVG 81 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~----~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
..++..||.+++|+.+.+ .+.|+++||+++++..|..+++.|++.||.|+++|+||||.|+.... ...++.++++
T Consensus 3 ~~~~~~~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~-~~~~~~~~~~ 81 (276)
T PHA02857 3 NCMFNLDNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKM-MIDDFGVYVR 81 (276)
T ss_pred ceeecCCCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccC-CcCCHHHHHH
Confidence 356778999999876543 44677779999999999999999999999999999999999976431 2346667777
Q ss_pred HHHHHHHHh----CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCC
Q 021184 82 DLVGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEP 157 (316)
Q Consensus 82 ~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
|+.+.++.+ ...+++++||||||.+++.+|.++|++++++|+++|...... ......+...
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~--~~~~~~~~~~------------- 146 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA--VPRLNLLAAK------------- 146 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc--ccHHHHHHHH-------------
Confidence 777777654 335899999999999999999999999999999998654211 0000000000
Q ss_pred CchhhhhhhhhHHHHHHHHh-cCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccc--cccceee---
Q 021184 158 GVAEEDFAQIDTARLIKKFL-GGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFT--GGLNYYR--- 231 (316)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 231 (316)
+...+ ....... . .+.+..+................ ....+..
T Consensus 147 ---------------~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (276)
T PHA02857 147 ---------------LMGIFYPNKIVGK--L--------------CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVL 195 (276)
T ss_pred ---------------HHHHhCCCCccCC--C--------------CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHH
Confidence 00000 0000000 0 00000000000000000000000 0000000
Q ss_pred ccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccC-CCceEEEEEcCCCccccccch---HHHHH
Q 021184 232 CLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDV-PGLQEVIVMEGVAHFINQEKA---DEVSS 307 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~gH~~~~~~~---~~~~~ 307 (316)
......... +.++++|+|+++|++|.++|++.+.++ .+.. ++. ++++++++||.++.|.+ +++.+
T Consensus 196 ~~~~~~~~~----l~~i~~Pvliv~G~~D~i~~~~~~~~l------~~~~~~~~-~~~~~~~~gH~~~~e~~~~~~~~~~ 264 (276)
T PHA02857 196 KATNKVRKI----IPKIKTPILILQGTNNEISDVSGAYYF------MQHANCNR-EIKIYEGAKHHLHKETDEVKKSVMK 264 (276)
T ss_pred HHHHHHHHh----cccCCCCEEEEecCCCCcCChHHHHHH------HHHccCCc-eEEEeCCCcccccCCchhHHHHHHH
Confidence 000000111 128899999999999999999888774 3433 456 99999999999998865 67999
Q ss_pred HHHHHHhh
Q 021184 308 HIYDFIKQ 315 (316)
Q Consensus 308 ~i~~fl~~ 315 (316)
.|.+||++
T Consensus 265 ~~~~~l~~ 272 (276)
T PHA02857 265 EIETWIFN 272 (276)
T ss_pred HHHHHHHH
Confidence 99999986
No 23
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.3e-32 Score=217.71 Aligned_cols=122 Identities=18% Similarity=0.333 Sum_probs=101.0
Q ss_pred eEEeeCCeeEEEEecCC------CCeEEEEccCCCCh-hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHH
Q 021184 7 TTVATNGINMHVASIGT------GPAVLFLHGFPELW-YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHV 79 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~------~~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (316)
.+...||.+++|..++. +++|||+||++.+. ..|..++..|+++||+|+++|+||||.|+.... ...+.+++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRA-YVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccc-cCCCHHHH
Confidence 44556999999987532 34699999998664 356777888999999999999999999975432 34578899
Q ss_pred HHHHHHHHHHhCc------ceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 80 VGDLVGLLDEFGI------EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 80 ~~~~~~~~~~~~~------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++|+.++++.++. .+++++||||||.+++.++.++|++|+++|++++...
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCK 170 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEeccccc
Confidence 9999999998753 3699999999999999999999999999999998654
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=3.7e-33 Score=223.63 Aligned_cols=269 Identities=17% Similarity=0.251 Sum_probs=160.8
Q ss_pred EeeCCeeEEEEecCC-CCeEEEEccCCCChh------------hHHHHHH---HHhhCCceEEecCCCCCCCCCCCCCCC
Q 021184 9 VATNGINMHVASIGT-GPAVLFLHGFPELWY------------SWRKQLL---YLSSRGYRAIAPDLRGYGDTDAPPSIT 72 (316)
Q Consensus 9 ~~~~g~~i~~~~~g~-~~~vv~~hG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~~~ 72 (316)
...+|.+++|...|+ ++++||+||+.++.. .|..++. .|...+|+|+++|+||||.|.. .
T Consensus 41 ~~~~~~~l~y~~~G~~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----~ 116 (343)
T PRK08775 41 AGLEDLRLRYELIGPAGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD----V 116 (343)
T ss_pred CCCCCceEEEEEeccCCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC----C
Confidence 455899999999995 767888877776655 6888876 5744469999999999998842 3
Q ss_pred CCCHHHHHHHHHHHHHHhCcceE-EEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhh
Q 021184 73 SYTALHVVGDLVGLLDEFGIEQV-FLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYI 151 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (316)
.++.+++++|+.+++++++++++ +++||||||++++.+|.++|++|+++|++++...... ......... ...
T Consensus 117 ~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~----~~~~~~~~~---~~~ 189 (343)
T PRK08775 117 PIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHP----YAAAWRALQ---RRA 189 (343)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCH----HHHHHHHHH---HHH
Confidence 46789999999999999999775 7999999999999999999999999999998653211 000010000 000
Q ss_pred hhhcCC-Cchhh--hh------hhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHH-Hhhccc
Q 021184 152 CRFQEP-GVAEE--DF------AQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYA-SKFSQK 221 (316)
Q Consensus 152 ~~~~~~-~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 221 (316)
...... ..... .. ........+...+..... ..... ... .....+.... ......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----------~~~-~~~~~l~~~~~~~~~~~ 254 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPE---VINGR-----------VRV-AAEDYLDAAGAQYVART 254 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCcc---ccCCC-----------ccc-hHHHHHHHHHHHHHHhc
Confidence 000000 00000 00 000000001111110000 00000 000 0000111000 000000
Q ss_pred ccccccceeeccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccC-CCceEEEEEcC-CCccccc
Q 021184 222 GFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDV-PGLQEVIVMEG-VAHFINQ 299 (316)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~-~gH~~~~ 299 (316)
.............. ... .+.+|++|+|+|+|++|.++|++...+ +.+.. +++ +++++++ +||++++
T Consensus 255 ~~~~~~~~~~~~~~-~~~----~l~~I~~PtLvi~G~~D~~~p~~~~~~------~~~~i~p~a-~l~~i~~~aGH~~~l 322 (343)
T PRK08775 255 PVNAYLRLSESIDL-HRV----DPEAIRVPTVVVAVEGDRLVPLADLVE------LAEGLGPRG-SLRVLRSPYGHDAFL 322 (343)
T ss_pred ChhHHHHHHHHHhh-cCC----ChhcCCCCeEEEEeCCCEeeCHHHHHH------HHHHcCCCC-eEEEEeCCccHHHHh
Confidence 00000000000000 000 112899999999999999999877665 44555 688 9999985 9999999
Q ss_pred cchHHHHHHHHHHHhh
Q 021184 300 EKADEVSSHIYDFIKQ 315 (316)
Q Consensus 300 ~~~~~~~~~i~~fl~~ 315 (316)
|+|++|++.|.+||++
T Consensus 323 E~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 323 KETDRIDAILTTALRS 338 (343)
T ss_pred cCHHHHHHHHHHHHHh
Confidence 9999999999999975
No 25
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=5.8e-33 Score=214.53 Aligned_cols=244 Identities=24% Similarity=0.384 Sum_probs=161.2
Q ss_pred EEEEecCC---CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc
Q 021184 16 MHVASIGT---GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI 92 (316)
Q Consensus 16 i~~~~~g~---~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
++|...|+ .|+||++||++.+...|.++++.|.+ ||+|+++|+||||.|.... ..++.+++++++.++++.++.
T Consensus 2 ~~~~~~g~~~~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~--~~~~~~~~~~~~~~~i~~~~~ 78 (251)
T TIGR02427 2 LHYRLDGAADGAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE--GPYSIEDLADDVLALLDHLGI 78 (251)
T ss_pred ceEEeecCCCCCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCC
Confidence 56766664 47899999999999999999998875 7999999999999997654 467999999999999999998
Q ss_pred ceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHH
Q 021184 93 EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARL 172 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (316)
++++++|||+||++++.+|.++|++++++|++++........ .+...+. ..... .... .....
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~-----~~~~~~~------~~~~~-----~~~~-~~~~~ 141 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE-----SWNARIA------AVRAE-----GLAA-LADAV 141 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh-----hHHHHHh------hhhhc-----cHHH-HHHHH
Confidence 899999999999999999999999999999998754321110 0000000 00000 0000 00111
Q ss_pred HHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc---ccccceeeccCcchhccCCCCCcccc
Q 021184 173 IKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF---TGGLNYYRCLDLNWELLAPWTGAQIK 249 (316)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~ 249 (316)
+..++...... ........+...+..... ......+........ .++++
T Consensus 142 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 193 (251)
T TIGR02427 142 LERWFTPGFRE----------------------AHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDR------LGAIA 193 (251)
T ss_pred HHHHccccccc----------------------CChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHH------hhhcC
Confidence 11111100000 000111111111111000 000000111110111 12789
Q ss_pred ccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 250 IPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 250 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
+|+++++|++|..+|++.... +.+..++. ++++++++||.+++++|+++.+.|.+|++
T Consensus 194 ~Pvlii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 194 VPTLCIAGDQDGSTPPELVRE------IADLVPGA-RFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CCeEEEEeccCCcCChHHHHH------HHHhCCCc-eEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 999999999999999887665 45667888 99999999999999999999999999984
No 26
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=2.8e-33 Score=224.55 Aligned_cols=277 Identities=14% Similarity=0.165 Sum_probs=157.0
Q ss_pred eeCCeeEEEEecCC----C-CeEEEEccCCCChhhHHHHH---HHHhhCCceEEecCCCCCCCCCCCCCC-CCCCHH---
Q 021184 10 ATNGINMHVASIGT----G-PAVLFLHGFPELWYSWRKQL---LYLSSRGYRAIAPDLRGYGDTDAPPSI-TSYTAL--- 77 (316)
Q Consensus 10 ~~~g~~i~~~~~g~----~-~~vv~~hG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~--- 77 (316)
+++|.+++|...|+ + |+||++||++++...|..++ +.|...+|+|+++|+||||.|+.+... ..++.+
T Consensus 22 ~~~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 101 (339)
T PRK07581 22 TLPDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFP 101 (339)
T ss_pred CcCCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 45788999999885 2 45777777776766665543 467666799999999999999765421 123333
Q ss_pred --HHHHHHHH----HHHHhCcceE-EEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccc-hh
Q 021184 78 --HVVGDLVG----LLDEFGIEQV-FLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGD-DF 149 (316)
Q Consensus 78 --~~~~~~~~----~~~~~~~~~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~ 149 (316)
.+++|+.+ ++++++++++ +++||||||++|+.+|.++|++|+++|++++..................+.. ..
T Consensus 102 ~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~ 181 (339)
T PRK07581 102 HVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPA 181 (339)
T ss_pred ceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 24555554 6688999994 7999999999999999999999999999987553211000000000000000 00
Q ss_pred hhhhhcCCCchhhhhhhh----hHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCC-hHHHHHHHHhh----cc
Q 021184 150 YICRFQEPGVAEEDFAQI----DTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLS-EEDVNYYASKF----SQ 220 (316)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~ 220 (316)
+...+. ........... ........++....... . .... ++....+.... ..
T Consensus 182 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~ 242 (339)
T PRK07581 182 FNGGWY-AEPPERGLRAHARVYAGWGFSQAFYRQELWRA-----------------M-GYASLEDFLVGFWEGNFLPRDP 242 (339)
T ss_pred CCCCCC-CCcHHHHHHHHHHHHHHHHhHHHHHHhhhccc-----------------c-ChhhHHHHHHHHHHHhhcccCc
Confidence 000000 00000000000 00000011111000000 0 0000 11111111111 10
Q ss_pred ccccccccee------ecc--CcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcC
Q 021184 221 KGFTGGLNYY------RCL--DLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEG 292 (316)
Q Consensus 221 ~~~~~~~~~~------~~~--~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 292 (316)
.........+ ... ....... +++|++|+|+|+|++|.++|++..+. +++.+|++ +++++++
T Consensus 243 ~~~~~~l~~~~~~~~~~~~~~~~d~~~~----L~~I~~PtLvI~G~~D~~~p~~~~~~------l~~~ip~a-~l~~i~~ 311 (339)
T PRK07581 243 NNLLAMLWTWQRGDISRNPAYGGDLAAA----LGSITAKTFVMPISTDLYFPPEDCEA------EAALIPNA-ELRPIES 311 (339)
T ss_pred ccHHHHHHHhhhcccccCcccCCCHHHH----HhcCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-eEEEeCC
Confidence 1111100000 000 0011111 22799999999999999999887665 56778998 9999998
Q ss_pred -CCccccccchHHHHHHHHHHHhhC
Q 021184 293 -VAHFINQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 293 -~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
+||+++++++++++..|.+||+++
T Consensus 312 ~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 312 IWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred CCCccccccCcHHHHHHHHHHHHHH
Confidence 899999999999999999999874
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=215.30 Aligned_cols=255 Identities=27% Similarity=0.327 Sum_probs=160.1
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhC-CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
++|+||++||++++...|+.++..|.++ |+.|+++|++|+|.++..+....|+..+++..+..+......++++++|||
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS 136 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHS 136 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeC
Confidence 4789999999999999999999999876 599999999999966555544669999999999999999998899999999
Q ss_pred hhHHHHHHHHHhCccccceee---eecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhc
Q 021184 102 WGALIAWYFCLLRPDRVKALV---NLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLG 178 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~~i---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
+||.+|+.+|+.+|+.|++++ ++++.......... .....+...........+..... ........+.
T Consensus 137 ~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~~~ 207 (326)
T KOG1454|consen 137 LGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIK---GLRRLLDKFLSALELLIPLSLTE------PVRLVSEGLL 207 (326)
T ss_pred cHHHHHHHHHHhCcccccceeeecccccccccCCcchh---HHHHhhhhhccHhhhcCcccccc------chhheeHhhh
Confidence 999999999999999999999 55554433221111 11111000000000000000000 0000000000
Q ss_pred CCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccc-----ccccccceeeccCc---chhccCCCCCcccc-
Q 021184 179 GRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQK-----GFTGGLNYYRCLDL---NWELLAPWTGAQIK- 249 (316)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~i~- 249 (316)
.. ............+......... .-.....++..... ...... +++.
T Consensus 208 ~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~ 264 (326)
T KOG1454|consen 208 RC-------------------LKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLI----KKIWK 264 (326)
T ss_pred cc-------------------eeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhh----ccccC
Confidence 00 0000000000111111111100 00111111111111 111111 2565
Q ss_pred ccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhhC
Q 021184 250 IPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 250 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
||+|+++|++|.++|.+.+.. +.+.+|++ ++++++++||.+++|.|++++..|..|+.++
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~------~~~~~pn~-~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEE------LKKKLPNA-ELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CceEEEEcCcCCccCHHHHHH------HHhhCCCc-eEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 999999999999999996665 56767999 9999999999999999999999999999863
No 28
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=100.00 E-value=7e-32 Score=208.41 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=153.9
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCcceEEEEEech
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGD-LVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~G~S~ 102 (316)
+|+||++||++++...|..+++.|+ .||+|+++|+||+|.|+.+......++++.+++ +..+++.++.++++++|||+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 79 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSM 79 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEecc
Confidence 4789999999999999999999998 689999999999999987654456788999999 78888888888999999999
Q ss_pred hHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCCCC
Q 021184 103 GALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSP 182 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (316)
||.+++.+|.++|+++++++++++.+........ ........ .....+...........+......
T Consensus 80 Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 145 (251)
T TIGR03695 80 GGRIALYYALQYPERVQGLILESGSPGLATEEER----AARRQNDE----------QLAQRFEQEGLEAFLDDWYQQPLF 145 (251)
T ss_pred HHHHHHHHHHhCchheeeeEEecCCCCcCchHhh----hhhhhcch----------hhhhHHHhcCccHHHHHHhcCcee
Confidence 9999999999999999999999886543221000 00000000 000000000011111111110000
Q ss_pred CCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEeeCCCcc
Q 021184 183 KPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDIT 262 (316)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~ 262 (316)
.. ...........+...............+................++++|+++++|++|..
T Consensus 146 ~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 207 (251)
T TIGR03695 146 AS------------------QKNLPPEQRQALRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEK 207 (251)
T ss_pred ee------------------cccCChHHhHHHHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchH
Confidence 00 000011111111111000000000000000000000000000127899999999999987
Q ss_pred cCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 263 YHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
++ +..+. +.+..++. ++++++++||++++++|+++.+.|.+||+
T Consensus 208 ~~-~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 208 FV-QIAKE------MQKLLPNL-TLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HH-HHHHH------HHhcCCCC-cEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 64 33322 56677888 99999999999999999999999999984
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-31 Score=200.02 Aligned_cols=109 Identities=23% Similarity=0.361 Sum_probs=97.4
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI--TSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
++++|++||+|++...|...++.|++ .++|+++|++|+|+|+++.-. .......+++-+++.....++++.+|+|||
T Consensus 90 ~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHS 168 (365)
T KOG4409|consen 90 KTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHS 168 (365)
T ss_pred CCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeecc
Confidence 67999999999999999999999999 599999999999999887632 223455789999999999999999999999
Q ss_pred hhHHHHHHHHHhCccccceeeeecccccCCCC
Q 021184 102 WGALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~ 133 (316)
+||+++..||.+||++|+.+||++|......+
T Consensus 169 fGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~ 200 (365)
T KOG4409|consen 169 FGGYLAAKYALKYPERVEKLILVSPWGFPEKP 200 (365)
T ss_pred chHHHHHHHHHhChHhhceEEEecccccccCC
Confidence 99999999999999999999999998876544
No 30
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=7.2e-32 Score=207.67 Aligned_cols=238 Identities=19% Similarity=0.237 Sum_probs=147.4
Q ss_pred CCC-CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEe
Q 021184 22 GTG-PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGH 100 (316)
Q Consensus 22 g~~-~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
|++ |+|||+||++++...|..+++.|.+ +|+|+++|+||+|.|.... .++++++++++.+.+. ++++++||
T Consensus 1 g~g~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~---~~~~~~~~~~~~~~~~----~~~~lvG~ 72 (245)
T TIGR01738 1 GQGNVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFG---PLSLADAAEAIAAQAP----DPAIWLGW 72 (245)
T ss_pred CCCCceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCC---CcCHHHHHHHHHHhCC----CCeEEEEE
Confidence 455 7999999999999999999999986 5999999999999987543 4577877777665432 68999999
Q ss_pred chhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCC
Q 021184 101 DWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
||||.+++.+|.++|++++++|++++.+......... ........ ..+...+.. .....+..++...
T Consensus 73 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~~~ 139 (245)
T TIGR01738 73 SLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWP-EGIKPDVL-TGFQQQLSD-----------DYQRTIERFLALQ 139 (245)
T ss_pred cHHHHHHHHHHHHCHHhhheeeEecCCcccccCCccc-ccCCHHHH-HHHHHHhhh-----------hHHHHHHHHHHHH
Confidence 9999999999999999999999998865432111000 00000000 000000000 0000011111000
Q ss_pred CCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccc------cccccceeeccCcchhccCCCCCccccccEEE
Q 021184 181 SPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKG------FTGGLNYYRCLDLNWELLAPWTGAQIKIPVKF 254 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~ 254 (316)
..... ........+...+.... .......+...+.... +.++++|+|+
T Consensus 140 ~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~Pvli 193 (245)
T TIGR01738 140 TLGTP--------------------TARQDARALKQTLLARPTPNVQVLQAGLEILATVDLRQP------LQNISVPFLR 193 (245)
T ss_pred HhcCC--------------------ccchHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHH------HhcCCCCEEE
Confidence 00000 00000000100000000 0000000000111111 1289999999
Q ss_pred EeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHH
Q 021184 255 MVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 313 (316)
Q Consensus 255 i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
++|++|.++|++..+. +.+..+++ ++++++++||++++|+|+++++.|.+|+
T Consensus 194 i~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 194 LYGYLDGLVPAKVVPY------LDKLAPHS-ELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred EeecCCcccCHHHHHH------HHHhCCCC-eEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999877665 55778898 9999999999999999999999999995
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=1.3e-31 Score=211.30 Aligned_cols=123 Identities=24% Similarity=0.381 Sum_probs=102.7
Q ss_pred ceEEeeCCeeEEEEecCC---CCeEEEEccCCCChhh-HHHHHHHHhhCCceEEecCCCCCCCCCCCCCCC-CCCHHHHH
Q 021184 6 HTTVATNGINMHVASIGT---GPAVLFLHGFPELWYS-WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSIT-SYTALHVV 80 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~---~~~vv~~hG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-~~~~~~~~ 80 (316)
+.+++.+|.++.|...+. +++|||+||++++... |..+...|.+.||+|+++|+||+|.|..+.... .++.++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~ 83 (288)
T TIGR01250 4 EGIITVDGGYHLFTKTGGEGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFV 83 (288)
T ss_pred cceecCCCCeEEEEeccCCCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHH
Confidence 345778888888887763 6799999998766554 555555666558999999999999998654322 37899999
Q ss_pred HHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 81 GDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
+++.+++++++.++++++||||||.+++.+|..+|++++++|++++..
T Consensus 84 ~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 84 DELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 999999999999999999999999999999999999999999998754
No 32
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=100.00 E-value=1.4e-32 Score=209.17 Aligned_cols=224 Identities=31% Similarity=0.475 Sum_probs=147.7
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHH
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALI 106 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|+.......++++++++|+.++++.++.++++++|||+||.+
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~ 79 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMI 79 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccccccccccccccccc
Confidence 7999999999999999999995 689999999999999987664346789999999999999999999999999999999
Q ss_pred HHHHHHhCccccceeeeecccccCCCCCC-C-chhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCCCCCC
Q 021184 107 AWYFCLLRPDRVKALVNLSVVFRSRNPAT-K-PVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKP 184 (316)
Q Consensus 107 a~~~a~~~p~~v~~~il~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (316)
++.++.++|++|+++|+++++........ . ....+...... ......... ...+....
T Consensus 80 a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~------- 139 (228)
T PF12697_consen 80 ALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAW------------RSRSLRRLA-SRFFYRWF------- 139 (228)
T ss_dssp HHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHH------------HHHHHHHHH-HHHHHHHH-------
T ss_pred ccccccccccccccceeecccccccccccccccchhhhhhhhc------------ccccccccc-cccccccc-------
Confidence 99999999999999999999764311000 0 00000000000 000000000 00000000
Q ss_pred CCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeec--cCcchhccCCCCCccccccEEEEeeCCCcc
Q 021184 185 PCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRC--LDLNWELLAPWTGAQIKIPVKFMVGDLDIT 262 (316)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~ 262 (316)
........... ........++. ......... .++++|+++++|++|.+
T Consensus 140 ----------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~----~~~~~pvl~i~g~~D~~ 189 (228)
T PF12697_consen 140 ----------------------DGDEPEDLIRS----SRRALAEYLRSNLWQADLSEAL----PRIKVPVLVIHGEDDPI 189 (228)
T ss_dssp ----------------------THHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH----HGSSSEEEEEEETTSSS
T ss_pred ----------------------ccccccccccc----cccccccccccccccccccccc----cccCCCeEEeecCCCCC
Confidence 00111110000 00000000000 000000111 17899999999999999
Q ss_pred cCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHH
Q 021184 263 YHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSH 308 (316)
Q Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 308 (316)
++.+..+. +.+..+++ ++++++++||++++++|++++++
T Consensus 190 ~~~~~~~~------~~~~~~~~-~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 190 VPPESAEE------LADKLPNA-ELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp SHHHHHHH------HHHHSTTE-EEEEETTSSSTHHHHSHHHHHHH
T ss_pred CCHHHHHH------HHHHCCCC-EEEEECCCCCccHHHCHHHHhcC
Confidence 99666655 55678888 99999999999999999999864
No 33
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.98 E-value=5.8e-31 Score=214.61 Aligned_cols=258 Identities=21% Similarity=0.318 Sum_probs=165.0
Q ss_pred eEEeeCCeeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 021184 7 TTVATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLV 84 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 84 (316)
..+..++.+++|...|+ +++|||+||++++...|..+...|.+. |+|+++|+||||.|.... ...+++++++++.
T Consensus 112 ~~~~~~~~~i~~~~~g~~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~--~~~~~~~~~~~~~ 188 (371)
T PRK14875 112 RKARIGGRTVRYLRLGEGDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV--GAGSLDELAAAVL 188 (371)
T ss_pred CcceEcCcEEEEecccCCCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC--CCCCHHHHHHHHH
Confidence 34667888899988874 689999999999999999999999875 999999999999996554 4678999999999
Q ss_pred HHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhh
Q 021184 85 GLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDF 164 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (316)
++++.++.++++++|||+||.+++.+|.++|+++.++|++++........ ..+... +.....
T Consensus 189 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~----~~~~~~---------~~~~~~----- 250 (371)
T PRK14875 189 AFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEIN----GDYIDG---------FVAAES----- 250 (371)
T ss_pred HHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccc----hhHHHH---------hhcccc-----
Confidence 99999998999999999999999999999999999999998764321110 000000 000000
Q ss_pred hhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCC
Q 021184 165 AQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWT 244 (316)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (316)
.......+...+..... .... +.......... . ........+.... +... ..... ....
T Consensus 251 -~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~~----~~~~---~~~~~--~~~~---- 309 (371)
T PRK14875 251 -RRELKPVLELLFADPAL----VTRQ-MVEDLLKYKRL-D-GVDDALRALADAL----FAGG---RQRVD--LRDR---- 309 (371)
T ss_pred -hhHHHHHHHHHhcChhh----CCHH-HHHHHHHHhcc-c-cHHHHHHHHHHHh----ccCc---ccchh--HHHH----
Confidence 00000111111110000 0000 00000000000 0 0000000000000 0000 00000 0001
Q ss_pred CccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhhC
Q 021184 245 GAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 245 ~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~~ 316 (316)
+.+++||+|+++|++|.++|++..+. ..++. ++.+++++||++++++|+++.+.|.+||+++
T Consensus 310 l~~i~~Pvlii~g~~D~~vp~~~~~~---------l~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 310 LASLAIPVLVIWGEQDRIIPAAHAQG---------LPDGV-AVHVLPGAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred HhcCCCCEEEEEECCCCccCHHHHhh---------ccCCC-eEEEeCCCCCChhhhCHHHHHHHHHHHhccC
Confidence 12789999999999999998765432 22356 8999999999999999999999999999864
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.98 E-value=2.2e-32 Score=219.88 Aligned_cols=121 Identities=26% Similarity=0.380 Sum_probs=100.4
Q ss_pred eeCCeeEEEEecCC-----CCeEEEEccCCCChh-----------hHHHHH---HHHhhCCceEEecCCCC--CCCCCCC
Q 021184 10 ATNGINMHVASIGT-----GPAVLFLHGFPELWY-----------SWRKQL---LYLSSRGYRAIAPDLRG--YGDTDAP 68 (316)
Q Consensus 10 ~~~g~~i~~~~~g~-----~~~vv~~hG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~~ 68 (316)
.++|.+++|...|. +++||++||++++.. .|..++ ..|...+|+|+++|+|| ||.|...
T Consensus 12 ~~~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~ 91 (351)
T TIGR01392 12 VLSDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPS 91 (351)
T ss_pred ccCCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCC
Confidence 45789999999984 579999999999763 377665 36666789999999999 5555431
Q ss_pred C---C-------CCCCCHHHHHHHHHHHHHHhCcce-EEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 69 P---S-------ITSYTALHVVGDLVGLLDEFGIEQ-VFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 69 ~---~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
. . ...++++++++++.+++++++.++ ++++||||||++++.+|.++|++|+++|++++....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 92 SINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARH 164 (351)
T ss_pred CCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcC
Confidence 1 0 125789999999999999999998 999999999999999999999999999999986643
No 35
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.98 E-value=6.2e-32 Score=218.62 Aligned_cols=120 Identities=23% Similarity=0.341 Sum_probs=98.2
Q ss_pred eeCCeeEEEEecCC-----CCeEEEEccCCCChhh-------------HHHHHH---HHhhCCceEEecCCCCC-CCCCC
Q 021184 10 ATNGINMHVASIGT-----GPAVLFLHGFPELWYS-------------WRKQLL---YLSSRGYRAIAPDLRGY-GDTDA 67 (316)
Q Consensus 10 ~~~g~~i~~~~~g~-----~~~vv~~hG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~G~-G~s~~ 67 (316)
.++|.+++|...|+ +|+|||+||++++... |..++. .|...+|+|+++|++|+ |.|..
T Consensus 29 ~~~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~ 108 (379)
T PRK00175 29 VLPPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTG 108 (379)
T ss_pred CcCCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCC
Confidence 45778889999884 5899999999999874 556552 44345799999999983 54433
Q ss_pred CCC------------CCCCCHHHHHHHHHHHHHHhCcce-EEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 68 PPS------------ITSYTALHVVGDLVGLLDEFGIEQ-VFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 68 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+.+ ...++++++++++.+++++++.++ ++++||||||.+++.+|.++|++|+++|++++...
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 109 PSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred CCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 210 025799999999999999999999 48999999999999999999999999999998654
No 36
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.97 E-value=4.1e-30 Score=199.15 Aligned_cols=269 Identities=23% Similarity=0.289 Sum_probs=173.1
Q ss_pred ccceEEeeCCeeEEEEecCC----CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCC-CCCCCCCCCHHH
Q 021184 4 IKHTTVATNGINMHVASIGT----GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD-APPSITSYTALH 78 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~----~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~~~~~~ 78 (316)
.+..+...+|..++|..+.. ..+||++||.+.+..-|..++..|...||.|+++|+||||.|. +... ...++++
T Consensus 10 ~~~~~~~~d~~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg-~~~~f~~ 88 (298)
T COG2267 10 TEGYFTGADGTRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRG-HVDSFAD 88 (298)
T ss_pred ccceeecCCCceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcC-CchhHHH
Confidence 45667788999999988753 2589999999999999999999999999999999999999997 3332 3446899
Q ss_pred HHHHHHHHHHHhC----cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh
Q 021184 79 VVGDLVGLLDEFG----IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF 154 (316)
Q Consensus 79 ~~~~~~~~~~~~~----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
+.+|+..+++... ..+++++||||||.+++.++.+++.+++++|+.+|...... ......
T Consensus 89 ~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~---~~~~~~------------- 152 (298)
T COG2267 89 YVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG---AILRLI------------- 152 (298)
T ss_pred HHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh---hHHHHH-------------
Confidence 9999999999875 35899999999999999999999999999999999876532 000000
Q ss_pred cCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCC--hHHHHHHHHhhc-ccccccccceee
Q 021184 155 QEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLS--EEDVNYYASKFS-QKGFTGGLNYYR 231 (316)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~ 231 (316)
.............+...... . . .......+++ ++..+.+...-. ..+... ..++.
T Consensus 153 --------------~~~~~~~~~~~~~p~~~~~~-~--~----~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~-~~w~~ 210 (298)
T COG2267 153 --------------LARLALKLLGRIRPKLPVDS-N--L----LEGVLTDDLSRDPAEVAAYEADPLIGVGGPV-SRWVD 210 (298)
T ss_pred --------------HHHHhcccccccccccccCc-c--c----ccCcCcchhhcCHHHHHHHhcCCccccCCcc-HHHHH
Confidence 00000000000000000000 0 0 0001111111 122222222111 000000 00111
Q ss_pred ccCcchhccCCCCCccccccEEEEeeCCCcccC-CCcchhhhhccCccccCCCceEEEEEcCCCcccccc-ch--HHHHH
Q 021184 232 CLDLNWELLAPWTGAQIKIPVKFMVGDLDITYH-IPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQE-KA--DEVSS 307 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~-~~--~~~~~ 307 (316)
................+++|+|+++|++|.+++ .+...+++ -....++. ++++++|+.|-++.| +. +++.+
T Consensus 211 ~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~----~~~~~~~~-~~~~~~g~~He~~~E~~~~r~~~~~ 285 (298)
T COG2267 211 LALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFF----ERAGSPDK-ELKVIPGAYHELLNEPDRAREEVLK 285 (298)
T ss_pred HHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHH----HhcCCCCc-eEEecCCcchhhhcCcchHHHHHHH
Confidence 000000000000112789999999999999999 67776654 22445666 999999999999776 55 89999
Q ss_pred HHHHHHhhC
Q 021184 308 HIYDFIKQF 316 (316)
Q Consensus 308 ~i~~fl~~~ 316 (316)
.+.+|+.++
T Consensus 286 ~~~~~l~~~ 294 (298)
T COG2267 286 DILAWLAEA 294 (298)
T ss_pred HHHHHHHhh
Confidence 999999763
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=8.4e-30 Score=206.85 Aligned_cols=106 Identities=23% Similarity=0.387 Sum_probs=89.6
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHHHhCcceEEEE
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYT----ALHVVGDLVGLLDEFGIEQVFLV 98 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
++|+|||+||++++...|...+..|.+. |+|+++|+||||.|+.+.. ...+ .+.+++++.++++.++.++++++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~-~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lv 181 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDF-TCKSTEETEAWFIDSFEEWRKAKNLSNFILL 181 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCc-ccccHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 4689999999999999998889999875 9999999999999976542 1112 22356778888888898999999
Q ss_pred EechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 99 GHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
||||||.+++.+|.++|++++++|++++....
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~ 213 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAGFS 213 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCcccc
Confidence 99999999999999999999999999986544
No 38
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=1.1e-30 Score=179.59 Aligned_cols=248 Identities=19% Similarity=0.246 Sum_probs=171.1
Q ss_pred ccceEEeeCCeeEEEEecCCCC-eEEEEccCCCChh-hHHHHHHHHhhC-CceEEecCCCCCCCCCCCCCCCCCCHHHH-
Q 021184 4 IKHTTVATNGINMHVASIGTGP-AVLFLHGFPELWY-SWRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSITSYTALHV- 79 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~~~-~vv~~hG~~~~~~-~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~- 79 (316)
.++..+.+||.++.|...|+|| .|++++|.-++.. .|.+....|.+. .+.|+++|.||+|.|.++. .....+-+
T Consensus 21 ~te~kv~vng~ql~y~~~G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~--Rkf~~~ff~ 98 (277)
T KOG2984|consen 21 YTESKVHVNGTQLGYCKYGHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPE--RKFEVQFFM 98 (277)
T ss_pred hhhheeeecCceeeeeecCCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCc--ccchHHHHH
Confidence 4566788999999999999987 7999999877654 788887777654 3899999999999998877 44445444
Q ss_pred --HHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCC
Q 021184 80 --VGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEP 157 (316)
Q Consensus 80 --~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (316)
+++..++++.++.+++.++|||=||..++..|+++++.|..+|+.++....+.......+.++.. ..+..+.+.|
T Consensus 99 ~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv---~kWs~r~R~P 175 (277)
T KOG2984|consen 99 KDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDV---NKWSARGRQP 175 (277)
T ss_pred HhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHH---hhhhhhhcch
Confidence 44555677888999999999999999999999999999999999998877655433333333222 1111111111
Q ss_pred CchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcc-
Q 021184 158 GVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLN- 236 (316)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (316)
. ...+. .. .++.... +..+...... ...+.+
T Consensus 176 ~--e~~Yg---~e-~f~~~wa------------------------------~wvD~v~qf~------------~~~dG~f 207 (277)
T KOG2984|consen 176 Y--EDHYG---PE-TFRTQWA------------------------------AWVDVVDQFH------------SFCDGRF 207 (277)
T ss_pred H--HHhcC---HH-HHHHHHH------------------------------HHHHHHHHHh------------hcCCCch
Confidence 0 00000 00 0000000 0000000000 000000
Q ss_pred hhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 237 WELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 237 ~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
-+..++ +++||+||++|+.|++++...+-- +....+.+ ++.+.|.++|.+++..+++|+..+.+||++
T Consensus 208 Cr~~lp----~vkcPtli~hG~kDp~~~~~hv~f------i~~~~~~a-~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 208 CRLVLP----QVKCPTLIMHGGKDPFCGDPHVCF------IPVLKSLA-KVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred Hhhhcc----cccCCeeEeeCCcCCCCCCCCccc------hhhhcccc-eEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 011222 899999999999999999876543 55677888 999999999999999999999999999986
No 39
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.97 E-value=2.3e-30 Score=181.20 Aligned_cols=225 Identities=18% Similarity=0.233 Sum_probs=155.3
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CcceEEEEEe
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF---GIEQVFLVGH 100 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~ 100 (316)
+..|+++||+.|+....+.+.+.|.++||.|.++.+||||...... -..+.++|.+++.+..+++ +.+.|.++|.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f--l~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~Gl 92 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF--LKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGL 92 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH--hcCCHHHHHHHHHHHHHHHHHcCCCeEEEEee
Confidence 4799999999999999999999999999999999999999876433 4668899998888877766 5679999999
Q ss_pred chhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCC
Q 021184 101 DWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
||||.+++.+|..+| ++++|.++++....+.. ..++.+...+ .... .+..
T Consensus 93 SmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~-~iie~~l~y~------~~~k-------k~e~-------------- 142 (243)
T COG1647 93 SMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR-IIIEGLLEYF------RNAK-------KYEG-------------- 142 (243)
T ss_pred cchhHHHHHHHhhCC--ccceeeecCCcccccch-hhhHHHHHHH------HHhh-------hccC--------------
Confidence 999999999999998 99999999877643321 1111111100 0000 0000
Q ss_pred CCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEeeCCC
Q 021184 181 SPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLD 260 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 260 (316)
.+.+........+...........+... ....... ..|..|++++.|++|
T Consensus 143 -------------------------k~~e~~~~e~~~~~~~~~~~~~~~~~~i-~~~~~~~----~~I~~pt~vvq~~~D 192 (243)
T COG1647 143 -------------------------KDQEQIDKEMKSYKDTPMTTTAQLKKLI-KDARRSL----DKIYSPTLVVQGRQD 192 (243)
T ss_pred -------------------------CCHHHHHHHHHHhhcchHHHHHHHHHHH-HHHHhhh----hhcccchhheecccC
Confidence 1112222222222211111111111111 0011111 189999999999999
Q ss_pred cccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc-cchHHHHHHHHHHHhh
Q 021184 261 ITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ-EKADEVSSHIYDFIKQ 315 (316)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl~~ 315 (316)
+.+|.+.+..+++ ...++.+++.+++++||.+.. ++.+.+.+.+..||++
T Consensus 193 ~mv~~~sA~~Iy~-----~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 193 EMVPAESANFIYD-----HVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred CCCCHHHHHHHHH-----hccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 9999998887653 344555699999999999955 5789999999999974
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=5e-29 Score=196.92 Aligned_cols=123 Identities=23% Similarity=0.396 Sum_probs=102.6
Q ss_pred ceEEee-CCeeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021184 6 HTTVAT-NGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGD 82 (316)
Q Consensus 6 ~~~~~~-~g~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
+.+++. +|.+++|...|+ +++|||+||++++...+ .+...+...+|+|+++|+||||.|+.+.....++.+++++|
T Consensus 6 ~~~~~~~~~~~l~y~~~g~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~d 84 (306)
T TIGR01249 6 SGYLNVSDNHQLYYEQSGNPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVAD 84 (306)
T ss_pred CCeEEcCCCcEEEEEECcCCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHH
Confidence 344555 689999999986 78999999988776543 34445555679999999999999986543335678899999
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+..++++++.++++++||||||.+++.++.++|++++++|++++...
T Consensus 85 l~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 85 IEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 99999999999999999999999999999999999999999987654
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=5.2e-29 Score=200.44 Aligned_cols=254 Identities=17% Similarity=0.180 Sum_probs=154.3
Q ss_pred CCeeEEEEecCC-----CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021184 12 NGINMHVASIGT-----GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGL 86 (316)
Q Consensus 12 ~g~~i~~~~~g~-----~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
+|..+++..+.+ .++||++||++++...|..+++.|+++||+|+++|+||||.|+.... ...+.+.+++|+.++
T Consensus 119 ~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~-~~~~~~~~~~Dl~~~ 197 (395)
T PLN02652 119 RRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG-YVPSLDYVVEDTEAF 197 (395)
T ss_pred CCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-CCcCHHHHHHHHHHH
Confidence 566777766533 35899999999998899999999999999999999999999986542 345788889999999
Q ss_pred HHHhCc----ceEEEEEechhHHHHHHHHHhCcc---ccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCc
Q 021184 87 LDEFGI----EQVFLVGHDWGALIAWYFCLLRPD---RVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGV 159 (316)
Q Consensus 87 ~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
++.+.. .+++++||||||.+++.++. +|+ +++++|+.+|....... . .....
T Consensus 198 l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~--~---~~~~~--------------- 256 (395)
T PLN02652 198 LEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPA--H---PIVGA--------------- 256 (395)
T ss_pred HHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccc--h---HHHHH---------------
Confidence 988753 37999999999999997764 564 79999999886532110 0 00000
Q ss_pred hhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHH-HHHHHhhcccccccccceeeccCcchh
Q 021184 160 AEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDV-NYYASKFSQKGFTGGLNYYRCLDLNWE 238 (316)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
....+............ ... .......+... ..+.......+.......+........
T Consensus 257 ---------~~~l~~~~~p~~~~~~~--~~~----------~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~ 315 (395)
T PLN02652 257 ---------VAPIFSLVAPRFQFKGA--NKR----------GIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSY 315 (395)
T ss_pred ---------HHHHHHHhCCCCcccCc--ccc----------cCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHH
Confidence 00001111000000000 000 00000000000 000000000000000000000000000
Q ss_pred ccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCcccccc-chHHHHHHHHHHHhh
Q 021184 239 LLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQE-KADEVSSHIYDFIKQ 315 (316)
Q Consensus 239 ~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 315 (316)
. ...+.++++|+|+++|++|.++|++.++++++. ...++. +++++++++|.++.| +++++.+.|.+||++
T Consensus 316 l--~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~----~~~~~k-~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 316 L--TRNFKSVTVPFMVLHGTADRVTDPLASQDLYNE----AASRHK-DIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred H--HhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHh----cCCCCc-eEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 0 001128899999999999999999888775420 112345 899999999999776 799999999999985
No 42
>PRK05855 short chain dehydrogenase; Validated
Probab=99.97 E-value=7.1e-29 Score=214.19 Aligned_cols=122 Identities=27% Similarity=0.600 Sum_probs=102.3
Q ss_pred CccceEEeeCCeeEEEEecCC--CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 021184 3 KIKHTTVATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVV 80 (316)
Q Consensus 3 ~~~~~~~~~~g~~i~~~~~g~--~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
+.+..+++.+|.+++|...|+ +|+|||+||++++...|..+++.|. .||+|+++|+||||.|+.+.....+++++++
T Consensus 2 ~~~~~~~~~~g~~l~~~~~g~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 2 QPRRTVVSSDGVRLAVYEWGDPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred CceEEEEeeCCEEEEEEEcCCCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 345667888999999999985 7899999999999999999999994 5799999999999999876544568999999
Q ss_pred HHHHHHHHHhCcce-EEEEEechhHHHHHHHHHhC--ccccceeeeec
Q 021184 81 GDLVGLLDEFGIEQ-VFLVGHDWGALIAWYFCLLR--PDRVKALVNLS 125 (316)
Q Consensus 81 ~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~a~~~--p~~v~~~il~~ 125 (316)
+|+.+++++++..+ ++++||||||.+++.++.+. ++++..++.++
T Consensus 81 ~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~ 128 (582)
T PRK05855 81 DDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVS 128 (582)
T ss_pred HHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheecc
Confidence 99999999998765 99999999999999888762 34444444443
No 43
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.97 E-value=3.8e-29 Score=231.90 Aligned_cols=112 Identities=30% Similarity=0.403 Sum_probs=98.6
Q ss_pred EEEEecCC---CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCC------CCCCCHHHHHHHHHHH
Q 021184 16 MHVASIGT---GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS------ITSYTALHVVGDLVGL 86 (316)
Q Consensus 16 i~~~~~g~---~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~~ 86 (316)
++|...|+ +|+|||+||++++...|..+++.|.+. |+|+++|+||||.|..... ...++++++++++.++
T Consensus 1360 i~~~~~G~~~~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~l 1438 (1655)
T PLN02980 1360 IKVHEVGQNAEGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKL 1438 (1655)
T ss_pred EEEEecCCCCCCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHH
Confidence 45666664 689999999999999999999999875 9999999999999975431 1356899999999999
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
+++++.++++++||||||.+++.++.++|++|+++|++++.+
T Consensus 1439 l~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1439 IEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred HHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 999999999999999999999999999999999999998754
No 44
>PLN02511 hydrolase
Probab=99.96 E-value=1.3e-29 Score=205.07 Aligned_cols=260 Identities=17% Similarity=0.262 Sum_probs=153.2
Q ss_pred eeCCeeEEEEec--------CCCCeEEEEccCCCChhh-H-HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHH
Q 021184 10 ATNGINMHVASI--------GTGPAVLFLHGFPELWYS-W-RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHV 79 (316)
Q Consensus 10 ~~~g~~i~~~~~--------g~~~~vv~~hG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (316)
..||..+.+.-. ..+|+||++||+++++.. | ..++..+.+.||+|+++|+||||.|.... .......+
T Consensus 78 ~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~--~~~~~~~~ 155 (388)
T PLN02511 78 TPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTT--PQFYSASF 155 (388)
T ss_pred CCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCC--cCEEcCCc
Confidence 347777764211 236799999999876643 4 45777777889999999999999997543 22233566
Q ss_pred HHHHHHHHHHhCc----ceEEEEEechhHHHHHHHHHhCccc--cceeeeecccccCCCCCCCchhhhhhhccchhhhhh
Q 021184 80 VGDLVGLLDEFGI----EQVFLVGHDWGALIAWYFCLLRPDR--VKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICR 153 (316)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
++|+.+++++++. .+++++||||||.+++.++.++|++ |.++++++++...... ...+...+. ..+
T Consensus 156 ~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~----~~~~~~~~~-~~y--- 227 (388)
T PLN02511 156 TGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIA----DEDFHKGFN-NVY--- 227 (388)
T ss_pred hHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHH----HHHHhccHH-HHH---
Confidence 7788888888754 5899999999999999999999987 8888888765422000 000000000 000
Q ss_pred hcCCCchhhhhhhhhHHHHHH---HHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcc--cccccccc
Q 021184 154 FQEPGVAEEDFAQIDTARLIK---KFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQ--KGFTGGLN 228 (316)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 228 (316)
...+... ...... ..+... ... ..... .. ....+..+...+.. .++.....
T Consensus 228 -------~~~~~~~-l~~~~~~~~~~~~~~-~~~--~~~~~----------~~---~~~~~~~fd~~~t~~~~gf~~~~~ 283 (388)
T PLN02511 228 -------DKALAKA-LRKIFAKHALLFEGL-GGE--YNIPL----------VA---NAKTVRDFDDGLTRVSFGFKSVDA 283 (388)
T ss_pred -------HHHHHHH-HHHHHHHHHHHHhhC-CCc--cCHHH----------HH---hCCCHHHHHHhhhhhcCCCCCHHH
Confidence 0000000 000110 000000 000 00000 00 00011112111111 12222222
Q ss_pred eeeccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHH----
Q 021184 229 YYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADE---- 304 (316)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~---- 304 (316)
+|........ +.+|++|+|+|+|++|+++|++..... ..+..+++ ++++++++||..++|+|+.
T Consensus 284 yy~~~s~~~~------L~~I~vPtLiI~g~dDpi~p~~~~~~~-----~~~~~p~~-~l~~~~~gGH~~~~E~p~~~~~~ 351 (388)
T PLN02511 284 YYSNSSSSDS------IKHVRVPLLCIQAANDPIAPARGIPRE-----DIKANPNC-LLIVTPSGGHLGWVAGPEAPFGA 351 (388)
T ss_pred HHHHcCchhh------hccCCCCeEEEEcCCCCcCCcccCcHh-----HHhcCCCE-EEEECCCcceeccccCCCCCCCC
Confidence 3322222222 228999999999999999998754221 34567898 9999999999999999876
Q ss_pred --HHHHHHHHHhh
Q 021184 305 --VSSHIYDFIKQ 315 (316)
Q Consensus 305 --~~~~i~~fl~~ 315 (316)
+.+.+.+||+.
T Consensus 352 ~w~~~~i~~Fl~~ 364 (388)
T PLN02511 352 PWTDPVVMEFLEA 364 (388)
T ss_pred ccHHHHHHHHHHH
Confidence 48999999874
No 45
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=1.3e-28 Score=181.34 Aligned_cols=264 Identities=16% Similarity=0.194 Sum_probs=168.6
Q ss_pred ceEEeeCCeeEEEEecCC----C--CeEEEEccCCCCh-hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHH
Q 021184 6 HTTVATNGINMHVASIGT----G--PAVLFLHGFPELW-YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALH 78 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~----~--~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (316)
..+.+.+|.++++..+-+ . -.|+++||++... ..|..++..|+..||.|+++|++|||.|++... .--+++.
T Consensus 30 ~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~-yi~~~d~ 108 (313)
T KOG1455|consen 30 SFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHA-YVPSFDL 108 (313)
T ss_pred eeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcc-cCCcHHH
Confidence 345566888888776643 2 3799999999876 788899999999999999999999999997653 4458889
Q ss_pred HHHHHHHHHHHhC------cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhh
Q 021184 79 VVGDLVGLLDEFG------IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYIC 152 (316)
Q Consensus 79 ~~~~~~~~~~~~~------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
.++|+....+... ..+..++||||||.+++.++.+.|+..+|+|+++|............ ....
T Consensus 109 ~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p-~v~~--------- 178 (313)
T KOG1455|consen 109 VVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHP-PVIS--------- 178 (313)
T ss_pred HHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCc-HHHH---------
Confidence 9999998888642 23789999999999999999999999999999999776533211110 0000
Q ss_pred hhcCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHH-HHhhcccccccccceee
Q 021184 153 RFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYY-ASKFSQKGFTGGLNYYR 231 (316)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (316)
....+..++..... .+..... ......++..... ...+...+.......+.
T Consensus 179 ----------------~l~~l~~liP~wk~----vp~~d~~--------~~~~kdp~~r~~~~~npl~y~g~pRl~T~~E 230 (313)
T KOG1455|consen 179 ----------------ILTLLSKLIPTWKI----VPTKDII--------DVAFKDPEKRKILRSDPLCYTGKPRLKTAYE 230 (313)
T ss_pred ----------------HHHHHHHhCCceee----cCCcccc--------ccccCCHHHHHHhhcCCceecCCccHHHHHH
Confidence 11112222222110 0000000 0000011111111 11111111111111111
Q ss_pred ccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc----cchHHHHH
Q 021184 232 CLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ----EKADEVSS 307 (316)
Q Consensus 232 ~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~ 307 (316)
.+.....+... +.++++|.+++||+.|.++.+..++++|+ .....+. ++.++||.=|.++. |+.+.+..
T Consensus 231 lLr~~~~le~~--l~~vtvPflilHG~dD~VTDp~~Sk~Lye----~A~S~DK-TlKlYpGm~H~Ll~gE~~en~e~Vf~ 303 (313)
T KOG1455|consen 231 LLRVTADLEKN--LNEVTVPFLILHGTDDKVTDPKVSKELYE----KASSSDK-TLKLYPGMWHSLLSGEPDENVEIVFG 303 (313)
T ss_pred HHHHHHHHHHh--cccccccEEEEecCCCcccCcHHHHHHHH----hccCCCC-ceeccccHHHHhhcCCCchhHHHHHH
Confidence 11111111111 12899999999999999999999999774 1223444 99999999998864 46678999
Q ss_pred HHHHHHhh
Q 021184 308 HIYDFIKQ 315 (316)
Q Consensus 308 ~i~~fl~~ 315 (316)
.|.+||++
T Consensus 304 DI~~Wl~~ 311 (313)
T KOG1455|consen 304 DIISWLDE 311 (313)
T ss_pred HHHHHHHh
Confidence 99999986
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.96 E-value=3.9e-27 Score=186.98 Aligned_cols=121 Identities=17% Similarity=0.283 Sum_probs=95.5
Q ss_pred EeeCCeeEEEEecCC---CCeEEEEccCCCChh-hH-------------------------HHHHHHHhhCCceEEecCC
Q 021184 9 VATNGINMHVASIGT---GPAVLFLHGFPELWY-SW-------------------------RKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 9 ~~~~g~~i~~~~~g~---~~~vv~~hG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d~ 59 (316)
.+.+|.+|+++.+.. +.+|+++||++.+.. .+ ..+++.|.+.||.|+++|+
T Consensus 3 ~~~~g~~l~~~~~~~~~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~ 82 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVKNAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL 82 (332)
T ss_pred cCCCCCeEEEeeeeccCCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc
Confidence 345899998887642 459999999998875 21 4678999999999999999
Q ss_pred CCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHhC------------------------cceEEEEEechhHHHHHHHHHh
Q 021184 60 RGYGDTDAPPSIT--SYTALHVVGDLVGLLDEFG------------------------IEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 60 ~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~~------------------------~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
||||.|....... ..+++++++|+..+++.+. ..+++++||||||.+++.++.+
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 9999998643211 2478999999999987642 2479999999999999999876
Q ss_pred Ccc--------ccceeeeeccccc
Q 021184 114 RPD--------RVKALVNLSVVFR 129 (316)
Q Consensus 114 ~p~--------~v~~~il~~~~~~ 129 (316)
+++ .++|+|+++|...
T Consensus 163 ~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 163 LGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred hccccccccccccceEEEeccceE
Confidence 542 5899998888754
No 47
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.96 E-value=3.1e-28 Score=182.54 Aligned_cols=255 Identities=19% Similarity=0.258 Sum_probs=163.3
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhC-CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----cceEEE
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG----IEQVFL 97 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 97 (316)
+.|+++++||+-++...|..+...|++. |-.|+++|.|.||.|.... .++...+++|+..+++..+ ..++++
T Consensus 51 ~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~---~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 51 RAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKIT---VHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred CCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCcccc---ccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 4799999999999999999999999876 7799999999999998765 5679999999999999885 458999
Q ss_pred EEechhH-HHHHHHHHhCccccceeeeecccccCCCCCC-CchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHH
Q 021184 98 VGHDWGA-LIAWYFCLLRPDRVKALVNLSVVFRSRNPAT-KPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKK 175 (316)
Q Consensus 98 ~G~S~Gg-~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
+|||||| .+++..+...|+.+..+|+++-.+....... ...+.+..+.....-.............+........+..
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 8888888999999999999887664211111 1111121111100000000001111111111112222222
Q ss_pred HhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEE
Q 021184 176 FLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFM 255 (316)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i 255 (316)
++...... .... ........-..+..+...+.. ......+.. .....|||++
T Consensus 208 fi~~nl~~-~~~~-----------~s~~w~~nl~~i~~~~~~~~~------------~s~~~~l~~----~~~~~pvlfi 259 (315)
T KOG2382|consen 208 FILTNLKK-SPSD-----------GSFLWRVNLDSIASLLDEYEI------------LSYWADLED----GPYTGPVLFI 259 (315)
T ss_pred HHHHhcCc-CCCC-----------CceEEEeCHHHHHHHHHHHHh------------hcccccccc----cccccceeEE
Confidence 22111100 0000 000000111222222221110 000001100 1679999999
Q ss_pred eeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 256 VGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 256 ~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.|.++..++.+...+ +.+.+|++ +++.++++||+++.|+|+++.+.|.+|+++
T Consensus 260 ~g~~S~fv~~~~~~~------~~~~fp~~-e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 260 KGLQSKFVPDEHYPR------MEKIFPNV-EVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred ecCCCCCcChhHHHH------HHHhccch-heeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 999999999886665 67888998 999999999999999999999999999975
No 48
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=9e-28 Score=192.47 Aligned_cols=282 Identities=13% Similarity=0.119 Sum_probs=161.9
Q ss_pred CCeeEEEEecCC-----CCeEEEEccCCCChhh-------------HHHHHH---HHhhCCceEEecCCCCCCCCCCC--
Q 021184 12 NGINMHVASIGT-----GPAVLFLHGFPELWYS-------------WRKQLL---YLSSRGYRAIAPDLRGYGDTDAP-- 68 (316)
Q Consensus 12 ~g~~i~~~~~g~-----~~~vv~~hG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~-- 68 (316)
+..++.|..+|. .++||++|++++++.. |..++. .|....|.|+++|..|-|.|..+
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 457788999986 4799999999885421 555542 45555699999999998753211
Q ss_pred ---------C--------CCCCCCHHHHHHHHHHHHHHhCcceEE-EEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 69 ---------P--------SITSYTALHVVGDLVGLLDEFGIEQVF-LVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 69 ---------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+ +...++++++++++.++++++++++++ ++||||||++++.+|.++|++|+++|++++....
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 1 124579999999999999999999986 9999999999999999999999999999886543
Q ss_pred CCCC-CCchhhhhhhcc------chhhhhhhcCCCchhhhh-----hhhhHHHHHHHHhcCCCCCCCCCCccccccCCCC
Q 021184 131 RNPA-TKPVDQYRALFG------DDFYICRFQEPGVAEEDF-----AQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPD 198 (316)
Q Consensus 131 ~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (316)
.... ....+..+..+. ...|.. -..|..-.... ........+..-+...... ...
T Consensus 199 ~~~~~~~~~~~~~~ai~~dp~~~~G~y~~-~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~----~~~-------- 265 (389)
T PRK06765 199 DAWTSVNVLQNWAEAIRLDPNWKGGKYYG-EEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASI----EVD-------- 265 (389)
T ss_pred ChhHHHHHHHHHHHHHHhCCCCCCCCCCC-CCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccc----ccc--------
Confidence 2211 111111111110 000000 00000000000 0000001111111100000 000
Q ss_pred CCCCCCCCChHHHHHH--------HHhhcccccccccceeeccCcchhc-cCCCCCccccccEEEEeeCCCcccCCCcch
Q 021184 199 LRTLPSWLSEEDVNYY--------ASKFSQKGFTGGLNYYRCLDLNWEL-LAPWTGAQIKIPVKFMVGDLDITYHIPGIR 269 (316)
Q Consensus 199 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~ 269 (316)
...........+.+ ...+....+..........+..... .....+.++++|+|+|+|++|.++|++..+
T Consensus 266 --~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~ 343 (389)
T PRK06765 266 --PYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNY 343 (389)
T ss_pred --ccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHH
Confidence 00000001111122 1222212222111111111110000 000112389999999999999999988776
Q ss_pred hhhhccCccccCC----CceEEEEEcC-CCccccccchHHHHHHHHHHHhh
Q 021184 270 EYIQNGGFKKDVP----GLQEVIVMEG-VAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 270 ~~~~~~~l~~~~~----~~~~~~~~~~-~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+ +++.++ ++ +++++++ +||.+++++|+++++.|.+||++
T Consensus 344 ~------la~~lp~~~~~a-~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 344 K------MVDILQKQGKYA-EVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred H------HHHHhhhcCCCe-EEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 6 344443 67 9999985 89999999999999999999974
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.95 E-value=7.5e-26 Score=183.81 Aligned_cols=233 Identities=17% Similarity=0.130 Sum_probs=144.8
Q ss_pred ceEEee-CCeeEEEEec-----CCCCeEEEEccCCCCh-hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHH
Q 021184 6 HTTVAT-NGINMHVASI-----GTGPAVLFLHGFPELW-YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALH 78 (316)
Q Consensus 6 ~~~~~~-~g~~i~~~~~-----g~~~~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (316)
...+.. +|.++..+.. ++.|+||++||+.+.. ..|..+++.|++.||.|+++|+||+|.|.... ...+...
T Consensus 170 ~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~--~~~d~~~ 247 (414)
T PRK05077 170 ELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK--LTQDSSL 247 (414)
T ss_pred EEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC--ccccHHH
Confidence 333444 4546653322 2246666666666554 56888889999999999999999999996543 1223444
Q ss_pred HHHHHHHHHHHh---CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhc
Q 021184 79 VVGDLVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQ 155 (316)
Q Consensus 79 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
...++.+.+... +.+++.++|||+||.+++.+|..+|++++++|+++++...... .......
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~---~~~~~~~------------ 312 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLT---DPKRQQQ------------ 312 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhc---chhhhhh------------
Confidence 444555555443 5578999999999999999999999999999999987531100 0000000
Q ss_pred CCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCc
Q 021184 156 EPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDL 235 (316)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
.... ....+...+... ....+.+......+. ...
T Consensus 313 --------~p~~-~~~~la~~lg~~------------------------~~~~~~l~~~l~~~s---l~~---------- 346 (414)
T PRK05077 313 --------VPEM-YLDVLASRLGMH------------------------DASDEALRVELNRYS---LKV---------- 346 (414)
T ss_pred --------chHH-HHHHHHHHhCCC------------------------CCChHHHHHHhhhcc---chh----------
Confidence 0000 000111111000 001111111111100 000
Q ss_pred chhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 236 NWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 236 ~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.... . +++++|+|+|+|++|.++|++.++. +.+..++. +++++|++ ++.+.++++.+.|.+||++
T Consensus 347 ~~~l-~----~~i~~PvLiI~G~~D~ivP~~~a~~------l~~~~~~~-~l~~i~~~---~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 347 QGLL-G----RRCPTPMLSGYWKNDPFSPEEDSRL------IASSSADG-KLLEIPFK---PVYRNFDKALQEISDWLED 411 (414)
T ss_pred hhhh-c----cCCCCcEEEEecCCCCCCCHHHHHH------HHHhCCCC-eEEEccCC---CccCCHHHHHHHHHHHHHH
Confidence 0000 0 1789999999999999999988875 55778898 99999985 5667999999999999986
Q ss_pred C
Q 021184 316 F 316 (316)
Q Consensus 316 ~ 316 (316)
+
T Consensus 412 ~ 412 (414)
T PRK05077 412 R 412 (414)
T ss_pred H
Confidence 3
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.95 E-value=4.9e-26 Score=180.85 Aligned_cols=263 Identities=18% Similarity=0.147 Sum_probs=147.6
Q ss_pred EeeCCeeEEEE--ecC----CCCeEEEEccCCCChhh--HHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCC---CHH
Q 021184 9 VATNGINMHVA--SIG----TGPAVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSY---TAL 77 (316)
Q Consensus 9 ~~~~g~~i~~~--~~g----~~~~vv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~---~~~ 77 (316)
...||..+.+. ..+ ++|+||++||++++... +..++..|.++||+|+++|+||||.+..... ..+ ..+
T Consensus 37 ~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~-~~~~~~~~~ 115 (324)
T PRK10985 37 ELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLH-RIYHSGETE 115 (324)
T ss_pred ECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCc-ceECCCchH
Confidence 34477665432 211 25799999999887543 4568899999999999999999997754321 111 233
Q ss_pred HHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccc--cceeeeecccccCCCCCCCchhhhhhhccchhhhhhhc
Q 021184 78 HVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDR--VKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQ 155 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (316)
|....+..+.+.++..+++++||||||.+++.+++++++. +.++|+++++...... ...+...+.. .+
T Consensus 116 D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~----~~~~~~~~~~-~~----- 185 (324)
T PRK10985 116 DARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEAC----SYRMEQGFSR-VY----- 185 (324)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHH----HHHHhhhHHH-HH-----
Confidence 3333333344445667899999999999999888887654 8899999886543110 0000000000 00
Q ss_pred CCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccc--ccccccceeecc
Q 021184 156 EPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQK--GFTGGLNYYRCL 233 (316)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 233 (316)
...+.. .................. ..... . .....+..+...+... ++.....++...
T Consensus 186 -----~~~l~~-~l~~~~~~~~~~~~~~~~-~~~~~----------~---~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~ 245 (324)
T PRK10985 186 -----QRYLLN-LLKANAARKLAAYPGTLP-INLAQ----------L---KSVRRLREFDDLITARIHGFADAIDYYRQC 245 (324)
T ss_pred -----HHHHHH-HHHHHHHHHHHhcccccc-CCHHH----------H---hcCCcHHHHhhhheeccCCCCCHHHHHHHC
Confidence 000000 000001111110000000 00000 0 0001122222222222 444445555443
Q ss_pred CcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccch-----HHHHHH
Q 021184 234 DLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKA-----DEVSSH 308 (316)
Q Consensus 234 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~-----~~~~~~ 308 (316)
+....+ +++++|+++|+|++|++++++.... +.+..++. ++++++++||+.+++.. ...-+.
T Consensus 246 ~~~~~l------~~i~~P~lii~g~~D~~~~~~~~~~------~~~~~~~~-~~~~~~~~GH~~~~~g~~~~~~~w~~~~ 312 (324)
T PRK10985 246 SALPLL------NQIRKPTLIIHAKDDPFMTHEVIPK------PESLPPNV-EYQLTEHGGHVGFVGGTLLKPQMWLEQR 312 (324)
T ss_pred ChHHHH------hCCCCCEEEEecCCCCCCChhhChH------HHHhCCCe-EEEECCCCCceeeCCCCCCCCCccHHHH
Confidence 322222 2899999999999999999876654 44566787 99999999999988742 355677
Q ss_pred HHHHHhh
Q 021184 309 IYDFIKQ 315 (316)
Q Consensus 309 i~~fl~~ 315 (316)
+.+|+++
T Consensus 313 ~~~~~~~ 319 (324)
T PRK10985 313 IPDWLTT 319 (324)
T ss_pred HHHHHHH
Confidence 7777754
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.94 E-value=3.9e-25 Score=168.00 Aligned_cols=121 Identities=21% Similarity=0.218 Sum_probs=92.8
Q ss_pred ceEEeeCCeeEEEEecCC-------CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC-CCCCCCCCCCCCCHH
Q 021184 6 HTTVATNGINMHVASIGT-------GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY-GDTDAPPSITSYTAL 77 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~-------~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~ 77 (316)
+.....+|.+|+-+..-+ .++||++||++++...+..+++.|+++||.|+.+|.||+ |.|++.. ...+..
T Consensus 12 ~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~--~~~t~s 89 (307)
T PRK13604 12 HVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTI--DEFTMS 89 (307)
T ss_pred heEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCcc--ccCccc
Confidence 334445888887554332 368999999999887899999999999999999999988 9997654 233444
Q ss_pred HHHHHHHHHHHHh---CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 78 HVVGDLVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 78 ~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
....|+..+++.+ +.+++.++||||||.+++..|... .++++|+.+|....
T Consensus 90 ~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l 143 (307)
T PRK13604 90 IGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL 143 (307)
T ss_pred ccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH
Confidence 4466776666655 456899999999999997777644 38999999987643
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.94 E-value=9.1e-25 Score=169.33 Aligned_cols=118 Identities=23% Similarity=0.275 Sum_probs=89.3
Q ss_pred eEEeeCCeeEEEE-ec-C--CCCeEEEEccCCC----ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHH
Q 021184 7 TTVATNGINMHVA-SI-G--TGPAVLFLHGFPE----LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALH 78 (316)
Q Consensus 7 ~~~~~~g~~i~~~-~~-g--~~~~vv~~hG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~ 78 (316)
..+..+|.++.-. .. . ++++||++||++. +...|..+++.|+++||.|+++|+||||.|.... .++++
T Consensus 5 ~~~~~~~~~l~g~~~~p~~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~----~~~~~ 80 (274)
T TIGR03100 5 LTFSCEGETLVGVLHIPGASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN----LGFEG 80 (274)
T ss_pred EEEEcCCcEEEEEEEcCCCCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC----CCHHH
Confidence 3445567665422 21 2 3568888888653 3345677889999999999999999999987532 36677
Q ss_pred HHHHHHHHHHHh-----CcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 79 VVGDLVGLLDEF-----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 79 ~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+.+|+.++++.+ +.++++++|||+||.+++.+|... .+|+++|+++|...
T Consensus 81 ~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~~v~~lil~~p~~~ 135 (274)
T TIGR03100 81 IDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-LRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-CCccEEEEECCccC
Confidence 788888888776 556799999999999999998754 58999999998644
No 53
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=9.7e-25 Score=175.01 Aligned_cols=295 Identities=16% Similarity=0.202 Sum_probs=166.2
Q ss_pred eEEeeCCeeEEEEecC---------CCCeEEEEccCCCChhhHH------HHHHHHhhCCceEEecCCCCCCCCCCC---
Q 021184 7 TTVATNGINMHVASIG---------TGPAVLFLHGFPELWYSWR------KQLLYLSSRGYRAIAPDLRGYGDTDAP--- 68 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g---------~~~~vv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~--- 68 (316)
...+.||..+...... .+|+|+++||++.++..|. .++..|+++||+|+++|.||++.|...
T Consensus 48 ~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~ 127 (395)
T PLN02872 48 TIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTL 127 (395)
T ss_pred EEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCC
Confidence 3445589888766531 2579999999998888873 455678899999999999998866321
Q ss_pred ----CCCCCCCHHHHH-HHHHHHHHHh---CcceEEEEEechhHHHHHHHHHhCcc---ccceeeeecccccCCCCCCCc
Q 021184 69 ----PSITSYTALHVV-GDLVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPD---RVKALVNLSVVFRSRNPATKP 137 (316)
Q Consensus 69 ----~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~ 137 (316)
.....+++++++ .|+.++++++ ..++++++||||||.+++.++ .+|+ +|+.+++++|...........
T Consensus 128 ~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~ 206 (395)
T PLN02872 128 SEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPL 206 (395)
T ss_pred CccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHH
Confidence 111246788888 7999999986 346899999999999998555 5776 688999999876542211111
Q ss_pred hhhhhhhccchhhhhhhcCCCc--hhhhhh---hh------hHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCC
Q 021184 138 VDQYRALFGDDFYICRFQEPGV--AEEDFA---QI------DTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWL 206 (316)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (316)
...+... ........+..... ...... .. .....+..+.... .......+.... ...+...
T Consensus 207 ~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~----~~~n~~~~~~~~---~~~pagt 278 (395)
T PLN02872 207 VLRMVFM-HLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN----CCFNASRIDYYL---EYEPHPS 278 (395)
T ss_pred HHHHHHH-hHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC----cccchhhhhHHH---hcCCCcc
Confidence 1111000 00000000100000 000000 00 0001111111100 000000000000 1122333
Q ss_pred ChHHHHHHHHhhcccccccccce-eeccC-cchhccCCCCCccc--cccEEEEeeCCCcccCCCcchhhhhccCccccCC
Q 021184 207 SEEDVNYYASKFSQKGFTGGLNY-YRCLD-LNWELLAPWTGAQI--KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVP 282 (316)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~i--~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~ 282 (316)
+-..+..+........++....- ..... ..........++++ ++|+++++|++|.+++++.+.+ +.+.++
T Consensus 279 S~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~------l~~~Lp 352 (395)
T PLN02872 279 SVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEH------TLAELP 352 (395)
T ss_pred hHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHH------HHHHCC
Confidence 44555555555443332211110 00100 00001111233466 6899999999999999887766 446666
Q ss_pred CceEEEEEcCCCccc---cccchHHHHHHHHHHHhhC
Q 021184 283 GLQEVIVMEGVAHFI---NQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 283 ~~~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~~ 316 (316)
+..+++.++++||.. ..+.|+++.+.|.+||+++
T Consensus 353 ~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 353 SKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 633888999999963 4588999999999999863
No 54
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.92 E-value=7e-25 Score=180.46 Aligned_cols=254 Identities=15% Similarity=0.145 Sum_probs=151.1
Q ss_pred CCeEEEEccCCCChhhHH-----HHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEE
Q 021184 24 GPAVLFLHGFPELWYSWR-----KQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLV 98 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
++|||++||+......++ .+++.|.++||+|+++|++|+|.+.......+|..+.+.+++..+++..+.++++++
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lv 267 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCV 267 (532)
T ss_pred CCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEE
Confidence 689999999988888775 789999999999999999999998765443455556677778888888898999999
Q ss_pred EechhHHHHH----HHHHhC-ccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh----cCCC-chhhhhhhhh
Q 021184 99 GHDWGALIAW----YFCLLR-PDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF----QEPG-VAEEDFAQID 168 (316)
Q Consensus 99 G~S~Gg~~a~----~~a~~~-p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~ 168 (316)
||||||.++. .+++.. +++|++++++++......+. .+..+............. ..+. .....+....
T Consensus 268 G~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G--~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 268 GYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPG--ELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcc--hhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 9999999852 345555 78899999999987654321 111111000000000000 0010 1111122212
Q ss_pred HHHH-----HHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhh-cccccccccceeeccCcchhccCC
Q 021184 169 TARL-----IKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKF-SQKGFTGGLNYYRCLDLNWELLAP 242 (316)
Q Consensus 169 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (316)
.... +...+....+. . .....+.. ....+..+....+...+ ....+.. ..+........
T Consensus 346 p~~l~w~~~v~~yl~g~~~~----~-fdll~Wn~----D~t~lP~~~~~~~lr~ly~~N~L~~--G~~~v~g~~~d---- 410 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSPV----P-FDLLFWNS----DSTNLPGKMHNFYLRNLYLQNALTT--GGLEVCGVRLD---- 410 (532)
T ss_pred hhhHHHHHHHHHHhcCCCcc----c-hhHHHHhc----cCccchHHHHHHHHHHHHhcCCCcC--CeeEECCEecc----
Confidence 2111 11121111110 0 00111111 12223334444444332 2222221 11222222222
Q ss_pred CCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchH
Q 021184 243 WTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKAD 303 (316)
Q Consensus 243 ~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~ 303 (316)
+.+|++|+|+|.|++|.++|++.+.. +.+.+++. +.++++++||.+++++|.
T Consensus 411 --L~~I~vPvLvV~G~~D~IvP~~sa~~------l~~~i~~~-~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 411 --LSKVKVPVYIIATREDHIAPWQSAYR------GAALLGGP-KTFVLGESGHIAGVVNPP 462 (532)
T ss_pred --hhhCCCCEEEEeeCCCCcCCHHHHHH------HHHHCCCC-EEEEECCCCCchHhhCCC
Confidence 23899999999999999999887765 45677888 888999999999988874
No 55
>PRK10566 esterase; Provisional
Probab=99.92 E-value=1.2e-23 Score=161.87 Aligned_cols=110 Identities=19% Similarity=0.227 Sum_probs=77.0
Q ss_pred EEEEecC----CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCC-----HHHHHHHHHHH
Q 021184 16 MHVASIG----TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYT-----ALHVVGDLVGL 86 (316)
Q Consensus 16 i~~~~~g----~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-----~~~~~~~~~~~ 86 (316)
+.|...+ +.|+||++||++++...|..+++.|++.||.|+++|+||||.+.........+ ..+..+|+.++
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHH
Confidence 4455543 25799999999999889999999999999999999999999864321101110 11223344444
Q ss_pred HHH------hCcceEEEEEechhHHHHHHHHHhCccccceeeeec
Q 021184 87 LDE------FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLS 125 (316)
Q Consensus 87 ~~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~ 125 (316)
++. ++.++++++|||+||.+++.++.++|+...++++++
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 433 245689999999999999999999986433444443
No 56
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.92 E-value=1.6e-24 Score=174.24 Aligned_cols=117 Identities=16% Similarity=0.137 Sum_probs=88.8
Q ss_pred eeCCeeEEEEecC----CCCeEEEEccCCCChhhH-----HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 021184 10 ATNGINMHVASIG----TGPAVLFLHGFPELWYSW-----RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVV 80 (316)
Q Consensus 10 ~~~g~~i~~~~~g----~~~~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
+.++..++.+... .+++||++||+..+...+ ..+++.|.++||+|+++|++|+|.++.. .++++++
T Consensus 44 ~~~~~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~-----~~~~d~~ 118 (350)
T TIGR01836 44 REDKVVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY-----LTLDDYI 118 (350)
T ss_pred EcCcEEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc-----CCHHHHH
Confidence 3345565544332 246899999986555443 5789999999999999999999987643 3556555
Q ss_pred HH-HH----HHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCC
Q 021184 81 GD-LV----GLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSR 131 (316)
Q Consensus 81 ~~-~~----~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 131 (316)
.+ +. .+.+..+.++++++||||||.+++.+++.+|++++++|+++++....
T Consensus 119 ~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 119 NGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 32 43 44455577899999999999999999999999999999999887643
No 57
>PRK11071 esterase YqiA; Provisional
Probab=99.91 E-value=2.8e-23 Score=151.22 Aligned_cols=184 Identities=20% Similarity=0.192 Sum_probs=125.4
Q ss_pred CeEEEEccCCCChhhHHH--HHHHHhhC--CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEe
Q 021184 25 PAVLFLHGFPELWYSWRK--QLLYLSSR--GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGH 100 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~--~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
|+||++||++++...|.. +...+.+. +|+|+++|+||+| ++.++++.++++.++.++++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------~~~~~~l~~l~~~~~~~~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------ADAAELLESLVLEHGGDPLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------HHHHHHHHHHHHHcCCCCeEEEEE
Confidence 689999999999999874 34556542 6999999999974 357888999999999899999999
Q ss_pred chhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCC
Q 021184 101 DWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
||||.+++.+|.++|. .+|+++|+..+. ..++.+....
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~---------------------------------------~~~~~~~~~~ 106 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVRPF---------------------------------------ELLTDYLGEN 106 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCCHH---------------------------------------HHHHHhcCCc
Confidence 9999999999999983 467788754310 0111111110
Q ss_pred CCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEeeCCC
Q 021184 181 SPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLD 260 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 260 (316)
. .... .....+++...+..... .. ... +..+|+++++|+.|
T Consensus 107 ~-~~~~--------------~~~~~~~~~~~~d~~~~----------------~~----~~i----~~~~~v~iihg~~D 147 (190)
T PRK11071 107 E-NPYT--------------GQQYVLESRHIYDLKVM----------------QI----DPL----ESPDLIWLLQQTGD 147 (190)
T ss_pred c-cccC--------------CCcEEEcHHHHHHHHhc----------------CC----ccC----CChhhEEEEEeCCC
Confidence 0 0000 00000122222221110 00 000 46888999999999
Q ss_pred cccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 261 ITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
.++|++.+.+++ + +. +.++++|++|.. .+.+++.+.|.+|++
T Consensus 148 e~V~~~~a~~~~------~---~~-~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 148 EVLDYRQAVAYY------A---AC-RQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred CcCCHHHHHHHH------H---hc-ceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 999999888754 2 34 667889999987 444889999999985
No 58
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.91 E-value=1.3e-23 Score=152.40 Aligned_cols=119 Identities=29% Similarity=0.354 Sum_probs=95.4
Q ss_pred EEeeCCee--EEEEecC----CCCeEEEEccCCCChhhHHHHHHHHhhC-CceEEecCCCCCCCCCCCCCCCCCCHHHHH
Q 021184 8 TVATNGIN--MHVASIG----TGPAVLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSITSYTALHVV 80 (316)
Q Consensus 8 ~~~~~g~~--i~~~~~g----~~~~vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~ 80 (316)
.++++|.. +..+..+ ++|.+++.||.+.+...|..++..|... ..+|+++|+||||.+..... .+.+.+.++
T Consensus 52 dv~i~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e-~dlS~eT~~ 130 (343)
T KOG2564|consen 52 DVSIDGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENE-DDLSLETMS 130 (343)
T ss_pred ccccCCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCCh-hhcCHHHHH
Confidence 34555544 4433333 4899999999999999999999988765 46788999999999976554 568999999
Q ss_pred HHHHHHHHHhC---cceEEEEEechhHHHHHHHHHh--Cccccceeeeecccc
Q 021184 81 GDLVGLLDEFG---IEQVFLVGHDWGALIAWYFCLL--RPDRVKALVNLSVVF 128 (316)
Q Consensus 81 ~~~~~~~~~~~---~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~ 128 (316)
+|+.++++.+- ..++++|||||||.+|...|.. -|. +.|+++++.+-
T Consensus 131 KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVE 182 (343)
T KOG2564|consen 131 KDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVE 182 (343)
T ss_pred HHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEec
Confidence 99999999872 3479999999999999988775 454 88999988753
No 59
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=1.3e-24 Score=165.75 Aligned_cols=76 Identities=36% Similarity=0.615 Sum_probs=70.8
Q ss_pred ceEEecCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccc
Q 021184 52 YRAIAPDLRGYGDTDA--PPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127 (316)
Q Consensus 52 ~~v~~~d~~G~G~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
|+|+++|+||+|.|++ ......++.+++++++..+++.++.++++++||||||.+++.+|+.+|++|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 7899999999999995 244478899999999999999999999999999999999999999999999999999986
No 60
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.90 E-value=9.9e-23 Score=143.60 Aligned_cols=93 Identities=30% Similarity=0.427 Sum_probs=76.7
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGAL 105 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ 105 (316)
+||++||++++...|..+++.|+++||.|+++|+|++|.+.... ...++.+++. ....+.++++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGAD-----AVERVLADIR--AGYPDPDRIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSH-----HHHHHHHHHH--HHHCTCCEEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhH-----HHHHHHHHHH--hhcCCCCcEEEEEEccCcH
Confidence 69999999999999999999999999999999999999883211 3333333333 1123667999999999999
Q ss_pred HHHHHHHhCccccceeeeecc
Q 021184 106 IAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 106 ~a~~~a~~~p~~v~~~il~~~ 126 (316)
+++.++.++ .+++++|++++
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~ 93 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSP 93 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESE
T ss_pred HHHHHhhhc-cceeEEEEecC
Confidence 999999998 68999999998
No 61
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.89 E-value=1.3e-21 Score=176.44 Aligned_cols=273 Identities=21% Similarity=0.247 Sum_probs=148.5
Q ss_pred CCCeEEEEccCCCChhhHHHH-----HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCcce
Q 021184 23 TGPAVLFLHGFPELWYSWRKQ-----LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE---FGIEQ 94 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 94 (316)
.+++|||+||++.+...|+.. ++.|.++||+|+++|+ |.++.+......++.+++..+.+.++. +..++
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~ 142 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRD 142 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCc
Confidence 468999999999999999864 8899999999999994 666544321235777777766666654 34468
Q ss_pred EEEEEechhHHHHHHHHHhC-ccccceeeeecccccCCCCCCCchh-hh---hhhccchhhhhhhcCCCc-hhhhhhhhh
Q 021184 95 VFLVGHDWGALIAWYFCLLR-PDRVKALVNLSVVFRSRNPATKPVD-QY---RALFGDDFYICRFQEPGV-AEEDFAQID 168 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~-p~~v~~~il~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 168 (316)
++++||||||.+++.+++.+ +++|+++|+++++..........+. .. ...+...........|.. ....+....
T Consensus 143 v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~ 222 (994)
T PRK07868 143 VHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLD 222 (994)
T ss_pred eEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcC
Confidence 99999999999999998755 5589999999988654222110000 00 000000000011111111 011111111
Q ss_pred HH---HHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcc-cccccccceeeccCcchhccCCCC
Q 021184 169 TA---RLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQ-KGFTGGLNYYRCLDLNWELLAPWT 244 (316)
Q Consensus 169 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 244 (316)
.. .....++..........+.+....+..... ...+ .......+...+.. ..... ..+...... ..
T Consensus 223 p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~-w~~~-~g~~~~~~~~~~~~~n~~~~--g~~~~~~~~------~~ 292 (994)
T PRK07868 223 PVKTAKARVDFLRQLHDREALLPREQQRRFLESEG-WIAW-SGPAISELLKQFIAHNRMMT--GGFAINGQM------VT 292 (994)
T ss_pred hhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhh-cccc-chHHHHHHHHHHHHhCcccC--ceEEECCEE------cc
Confidence 11 111111111111111011000000000000 0000 00111111111111 00000 000000000 01
Q ss_pred CccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEE-EEEcCCCccccc---cchHHHHHHHHHHHhh
Q 021184 245 GAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEV-IVMEGVAHFINQ---EKADEVSSHIYDFIKQ 315 (316)
Q Consensus 245 ~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 315 (316)
+++|++|+|+|+|++|.++|++..+. +.+..++. ++ .+++++||+.++ ..+++++..|.+||++
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~~~------l~~~i~~a-~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASVRG------IRRAAPNA-EVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHHHH------HHHhCCCC-eEEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 23899999999999999999988776 55778888 76 678999999865 4678999999999986
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.88 E-value=2.1e-20 Score=145.89 Aligned_cols=116 Identities=41% Similarity=0.718 Sum_probs=95.4
Q ss_pred eeCCeeEEEEecCC-CCeEEEEccCCCChhhHHHHHHHHhhC--CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 021184 10 ATNGINMHVASIGT-GPAVLFLHGFPELWYSWRKQLLYLSSR--GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGL 86 (316)
Q Consensus 10 ~~~g~~i~~~~~g~-~~~vv~~hG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
...+..+.|...+. +|+++++||++++...|......+... .|+++.+|+||||.|. .. ..+....++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~~~~~~~~~~~~~~ 81 (282)
T COG0596 6 AADGVRLAYREAGGGGPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---GYSLSAYADDLAAL 81 (282)
T ss_pred cCCCeEEEEeecCCCCCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---cccHHHHHHHHHHH
Confidence 44566777777765 679999999999999888843433332 1899999999999997 11 33455559999999
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++.++..+++++|||+||.+++.++.++|++++++|++++...
T Consensus 82 ~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 82 LDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 9999988999999999999999999999999999999998754
No 63
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.87 E-value=9.8e-21 Score=132.24 Aligned_cols=210 Identities=17% Similarity=0.224 Sum_probs=140.3
Q ss_pred EecCCCCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc-e-
Q 021184 19 ASIGTGPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE-Q- 94 (316)
Q Consensus 19 ~~~g~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 94 (316)
.+.|+...+|++||+-.+.. ....++.+|.+.|+.++.+|++|.|.|...-... .....++|+..+++++... +
T Consensus 28 h~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~G--n~~~eadDL~sV~q~~s~~nr~ 105 (269)
T KOG4667|consen 28 HETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYG--NYNTEADDLHSVIQYFSNSNRV 105 (269)
T ss_pred eccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccC--cccchHHHHHHHHHHhccCceE
Confidence 34567789999999987765 4567889999999999999999999998876433 4455569999999998433 3
Q ss_pred -EEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHH
Q 021184 95 -VFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLI 173 (316)
Q Consensus 95 -~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (316)
-+++|||-||.+++.+|.++++ ++-+|.+++.+..... + . ..... ..+
T Consensus 106 v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~----I---~-------------------eRlg~----~~l 154 (269)
T KOG4667|consen 106 VPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNG----I---N-------------------ERLGE----DYL 154 (269)
T ss_pred EEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcc----h---h-------------------hhhcc----cHH
Confidence 3789999999999999999987 8888888876543211 0 0 00000 011
Q ss_pred HHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHH-hhcccccccccceeeccCcchhccCCCCCccccccE
Q 021184 174 KKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYAS-KFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPV 252 (316)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 252 (316)
....... |.+.-......+..++++.+..... .+...... . ..+|||
T Consensus 155 ~~ike~G-----------fid~~~rkG~y~~rvt~eSlmdrLntd~h~aclk-----------------I----d~~C~V 202 (269)
T KOG4667|consen 155 ERIKEQG-----------FIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLK-----------------I----DKQCRV 202 (269)
T ss_pred HHHHhCC-----------ceecCcccCCcCceecHHHHHHHHhchhhhhhcC-----------------c----CccCce
Confidence 1111110 1111111122233333333322221 11110000 0 679999
Q ss_pred EEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCcccccc
Q 021184 253 KFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQE 300 (316)
Q Consensus 253 l~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~ 300 (316)
|-+||..|.++|.+.+++ +++..|+. ++.++||+.|.....
T Consensus 203 LTvhGs~D~IVPve~Ake------fAk~i~nH-~L~iIEgADHnyt~~ 243 (269)
T KOG4667|consen 203 LTVHGSEDEIVPVEDAKE------FAKIIPNH-KLEIIEGADHNYTGH 243 (269)
T ss_pred EEEeccCCceeechhHHH------HHHhccCC-ceEEecCCCcCccch
Confidence 999999999999999988 66889997 999999999986443
No 64
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=9.5e-21 Score=137.38 Aligned_cols=189 Identities=19% Similarity=0.209 Sum_probs=128.3
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hC-cceEEEEEe
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE-FG-IEQVFLVGH 100 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~l~G~ 100 (316)
.+++++.||..........+...|.. -+++|+++|++|+|.|.+.+. +....+-++.+.+.++. .| .++++++|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps--E~n~y~Di~avye~Lr~~~g~~~~Iil~G~ 137 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS--ERNLYADIKAVYEWLRNRYGSPERIILYGQ 137 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcc--cccchhhHHHHHHHHHhhcCCCceEEEEEe
Confidence 47999999997666655566666655 369999999999999998774 33333333334444433 33 568999999
Q ss_pred chhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCC
Q 021184 101 DWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGR 180 (316)
Q Consensus 101 S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (316)
|+|+..++.+|++.| ++++|+.+|...... -++...
T Consensus 138 SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r------------------------------------------v~~~~~ 173 (258)
T KOG1552|consen 138 SIGTVPTVDLASRYP--LAAVVLHSPFTSGMR------------------------------------------VAFPDT 173 (258)
T ss_pred cCCchhhhhHhhcCC--cceEEEeccchhhhh------------------------------------------hhccCc
Confidence 999999999999998 999999998654311 000000
Q ss_pred CCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEeeCCC
Q 021184 181 SPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLD 260 (316)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D 260 (316)
. ...+.+. +.. ... .+.|+||||++||++|
T Consensus 174 ~-------~~~~~d~----------------------------------f~~---i~k------I~~i~~PVLiiHgtdD 203 (258)
T KOG1552|consen 174 K-------TTYCFDA----------------------------------FPN---IEK------ISKITCPVLIIHGTDD 203 (258)
T ss_pred c-------eEEeecc----------------------------------ccc---cCc------ceeccCCEEEEecccC
Confidence 0 0000000 000 000 1278999999999999
Q ss_pred cccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 261 ITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 261 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.++|.....+++ +..++..+-.++.|+||.-. +...++.+.+..|+..
T Consensus 204 evv~~sHg~~Ly------e~~k~~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 204 EVVDFSHGKALY------ERCKEKVEPLWVKGAGHNDI-ELYPEYIEHLRRFISS 251 (258)
T ss_pred ceecccccHHHH------HhccccCCCcEEecCCCccc-ccCHHHHHHHHHHHHH
Confidence 999999887754 44444447788899999854 4555677888888753
No 65
>PRK11460 putative hydrolase; Provisional
Probab=99.87 E-value=1.4e-20 Score=141.82 Aligned_cols=177 Identities=12% Similarity=0.132 Sum_probs=118.5
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCC---------CCCC---CHHHHHHHHHHHHH---
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS---------ITSY---TALHVVGDLVGLLD--- 88 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~---~~~~~~~~~~~~~~--- 88 (316)
.|+||++||++++...|..+++.|.+.++.+..++.+|...+..... .... ...+..+.+.+.++
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 95 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQ 95 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999987655555555555432211100 0011 12222333333333
Q ss_pred -HhC--cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhh
Q 021184 89 -EFG--IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFA 165 (316)
Q Consensus 89 -~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (316)
..+ .++++++|||+||.+++.++.++|+.+.+++.+++.... .+
T Consensus 96 ~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~-~~-------------------------------- 142 (232)
T PRK11460 96 QQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS-LP-------------------------------- 142 (232)
T ss_pred HhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc-cc--------------------------------
Confidence 233 347999999999999999999999877877776652100 00
Q ss_pred hhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCC
Q 021184 166 QIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTG 245 (316)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (316)
. .
T Consensus 143 -------------------------------------------~-------------------------------~---- 144 (232)
T PRK11460 143 -------------------------------------------E-------------------------------T---- 144 (232)
T ss_pred -------------------------------------------c-------------------------------c----
Confidence 0 0
Q ss_pred ccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 246 AQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 246 ~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
...++|+++++|++|+++|.+.+++.. +.+.+...++ ++++++++||.+..+..+.+.+.+.++|.
T Consensus 145 ~~~~~pvli~hG~~D~vvp~~~~~~~~--~~L~~~g~~~-~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 145 APTATTIHLIHGGEDPVIDVAHAVAAQ--EALISLGGDV-TLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred ccCCCcEEEEecCCCCccCHHHHHHHH--HHHHHCCCCe-EEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 034789999999999999998887754 2344444455 89999999999976666666666666653
No 66
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.86 E-value=8.3e-20 Score=134.25 Aligned_cols=110 Identities=25% Similarity=0.377 Sum_probs=99.7
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc-eEEEEEechhH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE-QVFLVGHDWGA 104 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~Gg 104 (316)
+||-+||.+|+...|.++...|.+.|++++.+++||+|.+..+.+ ..++..+...-+.++++.++++ +++++|||.||
T Consensus 37 TVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~-~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGc 115 (297)
T PF06342_consen 37 TVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPD-QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGC 115 (297)
T ss_pred eEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcc-cccChHHHHHHHHHHHHHcCCCCceEEEEeccch
Confidence 799999999999999999999999999999999999999988776 6789999999999999999887 57899999999
Q ss_pred HHHHHHHHhCccccceeeeecccccCCCCCCCch
Q 021184 105 LIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPV 138 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~ 138 (316)
-.|+.+|..+| +.|+++++|+.........+.
T Consensus 116 enal~la~~~~--~~g~~lin~~G~r~HkgIrp~ 147 (297)
T PF06342_consen 116 ENALQLAVTHP--LHGLVLINPPGLRPHKGIRPL 147 (297)
T ss_pred HHHHHHHhcCc--cceEEEecCCccccccCcCHH
Confidence 99999999996 679999999887766555553
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.86 E-value=1.1e-20 Score=141.89 Aligned_cols=243 Identities=17% Similarity=0.180 Sum_probs=140.3
Q ss_pred CCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceEEE
Q 021184 24 GPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQVFL 97 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 97 (316)
.|.||++||+.|++. ....+++++.++||.|++++.|||+.+..... ...-.-..+|+..+++.+ ...++..
T Consensus 75 ~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p--~~yh~G~t~D~~~~l~~l~~~~~~r~~~a 152 (345)
T COG0429 75 KPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSP--RLYHSGETEDIRFFLDWLKARFPPRPLYA 152 (345)
T ss_pred CceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCc--ceecccchhHHHHHHHHHHHhCCCCceEE
Confidence 689999999977664 34667889999999999999999999865332 111111225555555544 5568999
Q ss_pred EEechhHHHHHHHHHhCcc--ccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHH
Q 021184 98 VGHDWGALIAWYFCLLRPD--RVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKK 175 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (316)
+|+|+||.+...+..+..+ .+.+.+.++.+.... .....+...+.. ......+...... .+.+
T Consensus 153 vG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~--------~~~~~l~~~~s~------~ly~r~l~~~L~~-~~~~ 217 (345)
T COG0429 153 VGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE--------ACAYRLDSGFSL------RLYSRYLLRNLKR-NAAR 217 (345)
T ss_pred EEecccHHHHHHHHHhhccCcccceeeeeeCHHHHH--------HHHHHhcCchhh------hhhHHHHHHHHHH-HHHH
Confidence 9999999555555555433 355655555543320 000000000000 0000111111111 1111
Q ss_pred HhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHH------HHHHHhhc--ccccccccceeeccCcchhccCCCCCcc
Q 021184 176 FLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDV------NYYASKFS--QKGFTGGLNYYRCLDLNWELLAPWTGAQ 247 (316)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
-+...... .+... .+.+ ..+...+. .-++.....||+.......+. +
T Consensus 218 kl~~l~~~------------------~p~~~-~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~------~ 272 (345)
T COG0429 218 KLKELEPS------------------LPGTV-LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLP------K 272 (345)
T ss_pred HHHhcCcc------------------cCcHH-HHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccccc------c
Confidence 11110000 00000 1111 11212221 135667777777776666555 9
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccc-cCCCceEEEEEcCCCcccccc----chH-HHHHHHHHHHhh
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKK-DVPGLQEVIVMEGVAHFINQE----KAD-EVSSHIYDFIKQ 315 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~gH~~~~~----~~~-~~~~~i~~fl~~ 315 (316)
|.+|+|+|++.+|++++++...+ ... ..|++ .+..-+.+||..++. +|. ...+.+.+||+.
T Consensus 273 Ir~PtLii~A~DDP~~~~~~iP~------~~~~~np~v-~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 273 IRKPTLIINAKDDPFMPPEVIPK------LQEMLNPNV-LLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cccceEEEecCCCCCCChhhCCc------chhcCCCce-EEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 99999999999999999977655 333 67777 999999999999886 333 556777788764
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.85 E-value=1.1e-20 Score=141.70 Aligned_cols=196 Identities=21% Similarity=0.288 Sum_probs=119.4
Q ss_pred HHHHHHHHhhCCceEEecCCCCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHH
Q 021184 40 WRKQLLYLSSRGYRAIAPDLRGYGDTDA------PPSITSYTALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a 111 (316)
|......|+++||.|+.+|+||.+.... .........+|.++.+..+++.- +.+++.++|+|+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 4456778889999999999999874321 11111223344444444444332 446899999999999999999
Q ss_pred HhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccc
Q 021184 112 LLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEI 191 (316)
Q Consensus 112 ~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (316)
.++|+++++++..+|............. +. .. ..... ..
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~--------------------------~~-~~~~~-~~------------ 121 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDI-YT--------------------------KA-EYLEY-GD------------ 121 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCC-HH--------------------------HG-HHHHH-SS------------
T ss_pred cccceeeeeeeccceecchhcccccccc-cc--------------------------cc-ccccc-Cc------------
Confidence 9999999999999987654321000000 00 00 00000 00
Q ss_pred cccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCcc--ccccEEEEeeCCCcccCCCcch
Q 021184 192 GFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQ--IKIPVKFMVGDLDITYHIPGIR 269 (316)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvl~i~G~~D~~~~~~~~~ 269 (316)
.+..++........ ... .+ +++|+|+++|++|..||++.+.
T Consensus 122 ------------~~~~~~~~~~~s~~-------------------~~~------~~~~~~~P~li~hG~~D~~Vp~~~s~ 164 (213)
T PF00326_consen 122 ------------PWDNPEFYRELSPI-------------------SPA------DNVQIKPPVLIIHGENDPRVPPSQSL 164 (213)
T ss_dssp ------------TTTSHHHHHHHHHG-------------------GGG------GGCGGGSEEEEEEETTBSSSTTHHHH
T ss_pred ------------cchhhhhhhhhccc-------------------ccc------ccccCCCCEEEEccCCCCccCHHHHH
Confidence 00001111111100 000 04 7999999999999999999988
Q ss_pred hhhhccCccccCCCceEEEEEcCCCcccc-ccchHHHHHHHHHHHhhC
Q 021184 270 EYIQNGGFKKDVPGLQEVIVMEGVAHFIN-QEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 270 ~~~~~~~l~~~~~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl~~~ 316 (316)
++++ .|.+...+. +++++|++||... .+...+..+.+.+||+++
T Consensus 165 ~~~~--~L~~~g~~~-~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 165 RLYN--ALRKAGKPV-ELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp HHHH--HHHHTTSSE-EEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHH--HHHhcCCCE-EEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 8773 366655566 9999999999664 456678889999999863
No 69
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=9.7e-21 Score=144.52 Aligned_cols=279 Identities=17% Similarity=0.178 Sum_probs=164.9
Q ss_pred eCCeeEEEEecCC-----CCeEEEEccCCCChhh-----------HHHHH---HHHhhCCceEEecCCCCCC-CCCCCCC
Q 021184 11 TNGINMHVASIGT-----GPAVLFLHGFPELWYS-----------WRKQL---LYLSSRGYRAIAPDLRGYG-DTDAPPS 70 (316)
Q Consensus 11 ~~g~~i~~~~~g~-----~~~vv~~hG~~~~~~~-----------~~~~~---~~l~~~g~~v~~~d~~G~G-~s~~~~~ 70 (316)
+++..|.|+.+|. ..+|+++|++.+++.. |..++ +.+....|.|++.|-.|.+ .|..+.+
T Consensus 33 l~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s 112 (368)
T COG2021 33 LSDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSS 112 (368)
T ss_pred ccCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCC
Confidence 3567788999985 4589999999885543 33332 2344445999999999876 4433321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHhCcceEE-EEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCch
Q 021184 71 -----------ITSYTALHVVGDLVGLLDEFGIEQVF-LVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPV 138 (316)
Q Consensus 71 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~-l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~ 138 (316)
...+++.|+++.-..+++++|++++. +||.||||+.++.++..||++|+.+|.+++............
T Consensus 113 ~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 113 INPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred cCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 24568899999889999999999985 899999999999999999999999999998665433222211
Q ss_pred hhhhhhcc------chhhhhhhcCCCchhhhhhh--------hhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCC
Q 021184 139 DQYRALFG------DDFYICRFQEPGVAEEDFAQ--------IDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPS 204 (316)
Q Consensus 139 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (316)
+..++.+. ...|.. -..| ...+.. ......+...+...... ......
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~-~~~P---~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~---------------~~~~~~ 253 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYE-GTQP---ERGLRLARMLAHLTYRSEEELDERFGRRLQA---------------DPLRGG 253 (368)
T ss_pred HHHHHHHHhCCCccCCCccC-CCCc---chhHHHHHHHHHHHccCHHHHHHHhcccccc---------------cccCCC
Confidence 11111110 000111 0011 011110 01111111111111100 000000
Q ss_pred CCChHHHHH--------HHHhhcccccccccceeeccCcchh-ccCCCCCccccccEEEEeeCCCcccCCCcchhhhhcc
Q 021184 205 WLSEEDVNY--------YASKFSQKGFTGGLNYYRCLDLNWE-LLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNG 275 (316)
Q Consensus 205 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~ 275 (316)
-....++. +...+....+......+...+.... ......++++++|+|++.-+.|.++|++..++
T Consensus 254 -~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~----- 327 (368)
T COG2021 254 -GVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRA----- 327 (368)
T ss_pred -chhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHH-----
Confidence 11122333 3333333333322222222222111 01111134899999999999999999998877
Q ss_pred CccccCCCceEEEEEc-CCCccccccchHHHHHHHHHHHhh
Q 021184 276 GFKKDVPGLQEVIVME-GVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 276 ~l~~~~~~~~~~~~~~-~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+.+.++....+++++ ..||..++...+.+...|..||+.
T Consensus 328 -~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 328 -LAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred -HHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 567777762365664 569999999889999999999985
No 70
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.85 E-value=1.2e-19 Score=141.40 Aligned_cols=249 Identities=16% Similarity=0.127 Sum_probs=145.2
Q ss_pred CCCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceEE
Q 021184 23 TGPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQVF 96 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 96 (316)
..|.||++||..+++. ....++..+.+.||+|++++.||+|.|.-... ..-..-+.+|+.++++++ ...++.
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTp--r~f~ag~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTP--RLFTAGWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCC--ceeecCCHHHHHHHHHHHHHhCCCCceE
Confidence 3589999999977654 34567777888899999999999999876542 222333556677776665 334899
Q ss_pred EEEechhHHHHHHHHHhCccc--cceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHH
Q 021184 97 LVGHDWGALIAWYFCLLRPDR--VKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIK 174 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (316)
.+|.||||.+...|..+..++ +.+.+.++.+..... ......... ....+... ....+.
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~-----~~~~~~~~~-------------~~~~y~~~-l~~~l~ 262 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLA-----ASRSIETPL-------------YRRFYNRA-LTLNLK 262 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhh-----hhhHHhccc-------------chHHHHHH-HHHhHH
Confidence 999999999999999986553 444444443332210 000000000 00000100 011111
Q ss_pred HHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcc--cccccccceeeccCcchhccCCCCCccccccE
Q 021184 175 KFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQ--KGFTGGLNYYRCLDLNWELLAPWTGAQIKIPV 252 (316)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 252 (316)
+++.....- . +.+....... .....++.+.+.+.. -++.....||+......... +|++|+
T Consensus 263 ~~~~~~r~~--~-----~~~~vd~d~~----~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v~------~I~VP~ 325 (409)
T KOG1838|consen 263 RIVLRHRHT--L-----FEDPVDFDVI----LKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYVD------KIKVPL 325 (409)
T ss_pred HHHhhhhhh--h-----hhccchhhhh----hhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhcc------cccccE
Confidence 111110000 0 0000000000 011333444444433 35677777788777766665 899999
Q ss_pred EEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccc----hHHHHHH-HHHHHhh
Q 021184 253 KFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEK----ADEVSSH-IYDFIKQ 315 (316)
Q Consensus 253 l~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~----~~~~~~~-i~~fl~~ 315 (316)
|+|++.+|+++|++..-.- .....|+. -+++-..+||..++|. +....+. +.+|+.+
T Consensus 326 L~ina~DDPv~p~~~ip~~-----~~~~np~v-~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~~ 387 (409)
T KOG1838|consen 326 LCINAADDPVVPEEAIPID-----DIKSNPNV-LLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLGN 387 (409)
T ss_pred EEEecCCCCCCCcccCCHH-----HHhcCCcE-EEEEeCCCceeeeeccCCCccchhHHHHHHHHHHH
Confidence 9999999999998654331 34567777 7888888899998876 2333444 6666653
No 71
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.84 E-value=7.5e-20 Score=156.66 Aligned_cols=229 Identities=20% Similarity=0.256 Sum_probs=146.3
Q ss_pred ceEEee-CCeeEEEEecCC---C-----CeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCC---CCCC--C
Q 021184 6 HTTVAT-NGINMHVASIGT---G-----PAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGD---TDAP--P 69 (316)
Q Consensus 6 ~~~~~~-~g~~i~~~~~g~---~-----~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~---s~~~--~ 69 (316)
...+.. ||.+++.+...+ + |+||++||.+.... .+....+.|+.+||.|+.+++||.+. .-.. .
T Consensus 367 ~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~ 446 (620)
T COG1506 367 PVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIR 446 (620)
T ss_pred EEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhh
Confidence 334444 788888665532 2 79999999986554 46677889999999999999997543 2111 1
Q ss_pred -CCCCCCHHHHHHHHHHHHHHh---CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhc
Q 021184 70 -SITSYTALHVVGDLVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALF 145 (316)
Q Consensus 70 -~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 145 (316)
+......+|+.+.+. ++... +.+++.++|||.||.+++..+.+.| .+++.+...+...-..........+...
T Consensus 447 ~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~- 523 (620)
T COG1506 447 GDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFD- 523 (620)
T ss_pred hccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCC-
Confidence 113446777777666 44443 3458999999999999999999998 6777766665432111000000000000
Q ss_pred cchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccccc
Q 021184 146 GDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTG 225 (316)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (316)
...... .+.+ ..+.+.
T Consensus 524 ---------------------------~~~~~~-----------------------~~~~----~~~~~~---------- 539 (620)
T COG1506 524 ---------------------------PEENGG-----------------------GPPE----DREKYE---------- 539 (620)
T ss_pred ---------------------------HHHhCC-----------------------Cccc----ChHHHH----------
Confidence 000000 0000 000000
Q ss_pred ccceeeccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc-cchHH
Q 021184 226 GLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ-EKADE 304 (316)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~-~~~~~ 304 (316)
....... ..++++|+|+|||++|..||.+.+.++++ .|+....++ +++++|+.||.+.. ++...
T Consensus 540 ------~~sp~~~------~~~i~~P~LliHG~~D~~v~~~q~~~~~~--aL~~~g~~~-~~~~~p~e~H~~~~~~~~~~ 604 (620)
T COG1506 540 ------DRSPIFY------ADNIKTPLLLIHGEEDDRVPIEQAEQLVD--ALKRKGKPV-ELVVFPDEGHGFSRPENRVK 604 (620)
T ss_pred ------hcChhhh------hcccCCCEEEEeecCCccCChHHHHHHHH--HHHHcCceE-EEEEeCCCCcCCCCchhHHH
Confidence 0000000 01899999999999999999999888874 466666677 99999999999855 66778
Q ss_pred HHHHHHHHHhhC
Q 021184 305 VSSHIYDFIKQF 316 (316)
Q Consensus 305 ~~~~i~~fl~~~ 316 (316)
+.+.+.+|++++
T Consensus 605 ~~~~~~~~~~~~ 616 (620)
T COG1506 605 VLKEILDWFKRH 616 (620)
T ss_pred HHHHHHHHHHHH
Confidence 889999998764
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.84 E-value=7.1e-20 Score=138.93 Aligned_cols=104 Identities=22% Similarity=0.155 Sum_probs=87.2
Q ss_pred CCeEEEEccCCCC----hhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCcceEE
Q 021184 24 GPAVLFLHGFPEL----WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE---FGIEQVF 96 (316)
Q Consensus 24 ~~~vv~~hG~~~~----~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 96 (316)
.++||++||+++. ...|..+++.|++.||.|+++|+||||.|.... ...+..++++|+..+++. .+.++++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~--~~~~~~~~~~Dv~~ai~~L~~~~~~~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDF--AAARWDVWKEDVAAAYRWLIEQGHPPVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcc--ccCCHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 4689999999864 345677889999999999999999999997654 345777888888776544 4567899
Q ss_pred EEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 97 LVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++||||||.+++.+|.++|++++++|+++|...
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999999999999999999998654
No 73
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.84 E-value=3.5e-19 Score=132.82 Aligned_cols=264 Identities=17% Similarity=0.200 Sum_probs=147.3
Q ss_pred eEEeeCCeeEEEEecCC----CCeEEEEccCCCChhh-HHHHH-----HHHhhCCceEEecCCCCCCCCCC--CCCCCCC
Q 021184 7 TTVATNGINMHVASIGT----GPAVLFLHGFPELWYS-WRKQL-----LYLSSRGYRAIAPDLRGYGDTDA--PPSITSY 74 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~----~~~vv~~hG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~ 74 (316)
..++..-..+++...|+ +|++|-.|..|.+..+ |..+. +.+.++ |.++-+|.||+..-.. +.+...-
T Consensus 2 h~v~t~~G~v~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 2 HDVETPYGSVHVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEETTEEEEEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT----
T ss_pred ceeccCceEEEEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCccccccccccc
Confidence 34666777888888874 7899999999988765 66653 456665 9999999999966433 3332355
Q ss_pred CHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh
Q 021184 75 TALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF 154 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
|++++++++.+++++++++.++.+|-..||.+..++|..+|++|.|+|++++...... ..+.....+... .+
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g----w~Ew~~~K~~~~----~L 152 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG----WMEWFYQKLSSW----LL 152 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-------HHHHHHHHHH--------
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc----HHHHHHHHHhcc----cc
Confidence 9999999999999999999999999999999999999999999999999999775432 122221111100 00
Q ss_pred cCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccc-ccccccceeecc
Q 021184 155 QEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQK-GFTGGLNYYRCL 233 (316)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 233 (316)
..-+ ......+..+...+...... ...+.++.+...+... .......+++..
T Consensus 153 ~~~g-----mt~~~~d~Ll~h~Fg~~~~~----------------------~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy 205 (283)
T PF03096_consen 153 YSYG-----MTSSVKDYLLWHYFGKEEEE----------------------NNSDLVQTYRQHLDERINPKNLALFLNSY 205 (283)
T ss_dssp ---C-----TTS-HHHHHHHHHS-HHHHH----------------------CT-HHHHHHHHHHHT-TTHHHHHHHHHHH
T ss_pred cccc-----cccchHHhhhhccccccccc----------------------ccHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 0000 00111111121111110000 0113344444444332 223333333333
Q ss_pred CcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHH
Q 021184 234 DLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFI 313 (316)
Q Consensus 234 ~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 313 (316)
..+.++... .....||+|++.|+..+.... +.+. ..+..|..+++..++++|=++..|+|..+.+.+.-||
T Consensus 206 ~~R~DL~~~--~~~~~c~vLlvvG~~Sp~~~~--vv~~-----ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFl 276 (283)
T PF03096_consen 206 NSRTDLSIE--RPSLGCPVLLVVGDNSPHVDD--VVEM-----NSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFL 276 (283)
T ss_dssp HT-----SE--CTTCCS-EEEEEETTSTTHHH--HHHH-----HHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHH
T ss_pred hccccchhh--cCCCCCCeEEEEecCCcchhh--HHHH-----HhhcCcccceEEEecccCCcccccCcHHHHHHHHHHH
Confidence 333222222 126679999999999876542 2221 2234455569999999999999999999999999999
Q ss_pred hh
Q 021184 314 KQ 315 (316)
Q Consensus 314 ~~ 315 (316)
+.
T Consensus 277 QG 278 (283)
T PF03096_consen 277 QG 278 (283)
T ss_dssp HH
T ss_pred cc
Confidence 85
No 74
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.84 E-value=8.6e-19 Score=128.70 Aligned_cols=267 Identities=18% Similarity=0.203 Sum_probs=170.0
Q ss_pred ceEEeeCCeeEEEEecCC----CCeEEEEccCCCChhh-HHHH-----HHHHhhCCceEEecCCCCCCCC--CCCCCCCC
Q 021184 6 HTTVATNGINMHVASIGT----GPAVLFLHGFPELWYS-WRKQ-----LLYLSSRGYRAIAPDLRGYGDT--DAPPSITS 73 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~----~~~vv~~hG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~G~G~s--~~~~~~~~ 73 (316)
+..+...-..+++...|+ +|++|-.|..+.+..+ |..+ +..+.++ |.|+-+|.||+-.- ..+.+...
T Consensus 24 e~~V~T~~G~v~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~y 102 (326)
T KOG2931|consen 24 EHDVETAHGVVHVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPY 102 (326)
T ss_pred eeeeccccccEEEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCC
Confidence 344455556677777763 6899999999988765 6654 4567777 99999999998544 33333235
Q ss_pred CCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhh
Q 021184 74 YTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICR 153 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (316)
-+.+++++++..++++++.+.++-+|..-|+.+..++|..||++|-|+||+++....... .+.....+....
T Consensus 103 Psmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gw----iew~~~K~~s~~---- 174 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGW----IEWAYNKVSSNL---- 174 (326)
T ss_pred CCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchH----HHHHHHHHHHHH----
Confidence 599999999999999999999999999999999999999999999999999987654332 111111110000
Q ss_pred hcCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhccccc-ccccceeec
Q 021184 154 FQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGF-TGGLNYYRC 232 (316)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 232 (316)
+. .........+-.+...+...... -..+.++.|...+..... .....++..
T Consensus 175 l~-----~~Gmt~~~~d~ll~H~Fg~e~~~----------------------~~~diVq~Yr~~l~~~~N~~Nl~~fl~a 227 (326)
T KOG2931|consen 175 LY-----YYGMTQGVKDYLLAHHFGKEELG----------------------NNSDIVQEYRQHLGERLNPKNLALFLNA 227 (326)
T ss_pred HH-----hhchhhhHHHHHHHHHhcccccc----------------------ccHHHHHHHHHHHHhcCChhHHHHHHHH
Confidence 00 00001111111222222221111 123445555555544332 333333334
Q ss_pred cCcchhccCCCC--CccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHH
Q 021184 233 LDLNWELLAPWT--GAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIY 310 (316)
Q Consensus 233 ~~~~~~~~~~~~--~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~ 310 (316)
...+.++..... ...++||+|++.|+..+.+.... + .-.+.-|..+.+..+.++|-.+..++|..+.+.+.
T Consensus 228 yn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv--~-----~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~ 300 (326)
T KOG2931|consen 228 YNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAVV--E-----CNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK 300 (326)
T ss_pred hcCCCCccccCCCcCccccccEEEEecCCCchhhhhh--h-----hhcccCcccceEEEEcccCCcccccCchHHHHHHH
Confidence 443333332211 12567999999999988665321 1 01233344348899999999999999999999999
Q ss_pred HHHhh
Q 021184 311 DFIKQ 315 (316)
Q Consensus 311 ~fl~~ 315 (316)
-|++.
T Consensus 301 ~FlqG 305 (326)
T KOG2931|consen 301 YFLQG 305 (326)
T ss_pred HHHcc
Confidence 99874
No 75
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.83 E-value=1.7e-20 Score=131.18 Aligned_cols=210 Identities=18% Similarity=0.252 Sum_probs=139.2
Q ss_pred eeCCeeEE-EEec--CCCCeEEEEccCCCChhhHHHHHHHH-hhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 021184 10 ATNGINMH-VASI--GTGPAVLFLHGFPELWYSWRKQLLYL-SSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVG 85 (316)
Q Consensus 10 ~~~g~~i~-~~~~--g~~~~vv~~hG~~~~~~~~~~~~~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 85 (316)
+-|.+++. |... .+.|+++++|+..++-...-..++-+ ...+.+|+.+++||+|.|.+.+.... ..-|-..
T Consensus 61 T~D~vtL~a~~~~~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~G-----L~lDs~a 135 (300)
T KOG4391|consen 61 TRDKVTLDAYLMLSESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEG-----LKLDSEA 135 (300)
T ss_pred cCcceeEeeeeecccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccc-----eeccHHH
Confidence 33666664 3322 34799999999999888776666654 34479999999999999998774333 3334445
Q ss_pred HHHHh------CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCc
Q 021184 86 LLDEF------GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGV 159 (316)
Q Consensus 86 ~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
+++++ +..++++.|-|+||.+|+.+|++..+++.++|+-++....+.......
T Consensus 136 vldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v--------------------- 194 (300)
T KOG4391|consen 136 VLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV--------------------- 194 (300)
T ss_pred HHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee---------------------
Confidence 55554 445899999999999999999999999999999998664311100000
Q ss_pred hhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhc
Q 021184 160 AEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWEL 239 (316)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
..... +.+..+. +...+.. ++..
T Consensus 195 -----~p~~~-k~i~~lc------------------------------------~kn~~~S---------~~ki------ 217 (300)
T KOG4391|consen 195 -----FPFPM-KYIPLLC------------------------------------YKNKWLS---------YRKI------ 217 (300)
T ss_pred -----ccchh-hHHHHHH------------------------------------HHhhhcc---------hhhh------
Confidence 00000 0000000 0000000 0000
Q ss_pred cCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCc-eEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 240 LAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGL-QEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 240 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.+.+.|.|++.|..|.++||..++..+ ...|.. +++.+||++.|.-.+ ..|-..+.|.+||.+
T Consensus 218 ------~~~~~P~LFiSGlkDelVPP~~Mr~Ly------~~c~S~~Krl~eFP~gtHNDT~-i~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 218 ------GQCRMPFLFISGLKDELVPPVMMRQLY------ELCPSRTKRLAEFPDGTHNDTW-ICDGYFQAIEDFLAE 281 (300)
T ss_pred ------ccccCceEEeecCccccCCcHHHHHHH------HhCchhhhhheeCCCCccCceE-EeccHHHHHHHHHHH
Confidence 056899999999999999999988865 333332 489999999998644 236688899999875
No 76
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.82 E-value=2.7e-19 Score=129.08 Aligned_cols=224 Identities=17% Similarity=0.208 Sum_probs=145.5
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCcceEEEEEec
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE-FGIEQVFLVGHD 101 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S 101 (316)
..+.++++|-.|+++..|..+...|... +.++.+++||.|.....+ ...+++++++.+...+.. ..-+++.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep--~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP--LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc--ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 3568999999999999999999988875 999999999999876555 567899999999888873 444689999999
Q ss_pred hhHHHHHHHHHhCcc---ccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhc
Q 021184 102 WGALIAWYFCLLRPD---RVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLG 178 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (316)
|||++|.++|.+... .+.++.+.++....... .. .+.......++..+..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~-~~--------------------------~i~~~~D~~~l~~l~~ 135 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR-GK--------------------------QIHHLDDADFLADLVD 135 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc-cC--------------------------CccCCCHHHHHHHHHH
Confidence 999999999987532 25556555543321110 00 0011112222222222
Q ss_pred CCCCCCCCCCccccccCCCCCCCCCCCCCh-HHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEee
Q 021184 179 GRSPKPPCVPKEIGFRGLPDLRTLPSWLSE-EDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVG 257 (316)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G 257 (316)
..... +..+.+ +.++.+...+ +..+..... |+... . ..++||+.++.|
T Consensus 136 lgG~p-------------------~e~led~El~~l~LPil-RAD~~~~e~-Y~~~~---~-------~pl~~pi~~~~G 184 (244)
T COG3208 136 LGGTP-------------------PELLEDPELMALFLPIL-RADFRALES-YRYPP---P-------APLACPIHAFGG 184 (244)
T ss_pred hCCCC-------------------hHHhcCHHHHHHHHHHH-HHHHHHhcc-cccCC---C-------CCcCcceEEecc
Confidence 11100 011111 2222222222 211111111 11111 0 179999999999
Q ss_pred CCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 258 DLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 258 ~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
++|..+..+.... +.+...+.-++.+++| ||+...++.+++.+.|.+.+.
T Consensus 185 ~~D~~vs~~~~~~------W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 185 EKDHEVSRDELGA------WREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred CcchhccHHHHHH------HHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 9999999877765 4455443339999997 999999999999999998885
No 77
>PLN00021 chlorophyllase
Probab=99.82 E-value=7.2e-19 Score=137.23 Aligned_cols=105 Identities=28% Similarity=0.377 Sum_probs=77.0
Q ss_pred CCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCcce
Q 021184 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE-------FGIEQ 94 (316)
Q Consensus 22 g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 94 (316)
++.|+|||+||++.+...|..+++.|+++||.|+++|++|++.+.... ...+..+..+.+.+.++. .+.++
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~--~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~ 127 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTD--EIKDAAAVINWLSSGLAAVLPEGVRPDLSK 127 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchh--hHHHHHHHHHHHHhhhhhhcccccccChhh
Confidence 346899999999999999999999999999999999999865432111 011122222233322222 24468
Q ss_pred EEEEEechhHHHHHHHHHhCcc-----ccceeeeecccc
Q 021184 95 VFLVGHDWGALIAWYFCLLRPD-----RVKALVNLSVVF 128 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~ 128 (316)
++++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 128 v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 128 LALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred eEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 9999999999999999999874 578899888854
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.82 E-value=1.9e-18 Score=134.33 Aligned_cols=106 Identities=20% Similarity=0.284 Sum_probs=75.8
Q ss_pred CCeEEEEccCCCChhhHHH---HHHHHhhCCceEEecCCCCCCC-----CCC-------------CCC------CCCCCH
Q 021184 24 GPAVLFLHGFPELWYSWRK---QLLYLSSRGYRAIAPDLRGYGD-----TDA-------------PPS------ITSYTA 76 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~-----s~~-------------~~~------~~~~~~ 76 (316)
.|+|+++||++++...|.. +...+...|+.|+.+|..++|. +.. ... ...+-.
T Consensus 47 ~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (283)
T PLN02442 47 VPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVV 126 (283)
T ss_pred CCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHH
Confidence 5899999999988877644 3456677799999999877662 110 000 001112
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+++...+....+.++.++++++||||||..++.++.++|+++++++++++...
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 33333444444456778899999999999999999999999999999998654
No 79
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=3.7e-18 Score=132.60 Aligned_cols=106 Identities=24% Similarity=0.370 Sum_probs=77.6
Q ss_pred CCeEEEEccCCCChhhHHHH--HHHH-hhCCceEEecCC--CCCCCCCCC------------------CCCCCCCHHH-H
Q 021184 24 GPAVLFLHGFPELWYSWRKQ--LLYL-SSRGYRAIAPDL--RGYGDTDAP------------------PSITSYTALH-V 79 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~--~~~l-~~~g~~v~~~d~--~G~G~s~~~------------------~~~~~~~~~~-~ 79 (316)
.|+|+++||++++...|... +..+ .+.|+.|+++|. +|+|.+... +....++..+ .
T Consensus 42 ~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~ 121 (275)
T TIGR02821 42 VPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYI 121 (275)
T ss_pred CCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHH
Confidence 68999999999988877542 3344 456899999998 555533210 0001123333 3
Q ss_pred HHHHHHHHHH---hCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 80 VGDLVGLLDE---FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 80 ~~~~~~~~~~---~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++++..+++. ++.++++++||||||.+++.++.++|+.+++++++++...
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 5677777776 3556899999999999999999999999999999988754
No 80
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.82 E-value=6e-19 Score=144.02 Aligned_cols=251 Identities=13% Similarity=0.033 Sum_probs=143.9
Q ss_pred CCeEEEEccCCCChhhH-----HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----Ccce
Q 021184 24 GPAVLFLHGFPELWYSW-----RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQ 94 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 94 (316)
++|||+++++-.....+ ..+++.|.++||.|+++|+++-+.+. ...+++++++.+.+.++.+ |.++
T Consensus 215 ~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~-----r~~~ldDYv~~i~~Ald~V~~~tG~~~ 289 (560)
T TIGR01839 215 ARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH-----REWGLSTYVDALKEAVDAVRAITGSRD 289 (560)
T ss_pred CCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh-----cCCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57999999998766666 47899999999999999999876654 3567888888777777765 6779
Q ss_pred EEEEEechhHHHHHH----HHHhCcc-ccceeeeecccccCCCCCCCc-hh--hhhhhccchhhhhhhcCC-Cchhhhhh
Q 021184 95 VFLVGHDWGALIAWY----FCLLRPD-RVKALVNLSVVFRSRNPATKP-VD--QYRALFGDDFYICRFQEP-GVAEEDFA 165 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~----~a~~~p~-~v~~~il~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~ 165 (316)
+.++|+|+||.++.. +++++++ +|++++++.++.....+.... .. ......... ....-..+ ......|.
T Consensus 290 vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~-~~~~G~lpg~~ma~~F~ 368 (560)
T TIGR01839 290 LNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRR-SYQAGVLDGSEMAKVFA 368 (560)
T ss_pred eeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHH-HHhcCCcCHHHHHHHHH
Confidence 999999999999997 7888886 799999999988764432111 00 000000000 00000111 11222233
Q ss_pred hhhHHHHHHHHhcCCC-CCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCC
Q 021184 166 QIDTARLIKKFLGGRS-PKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWT 244 (316)
Q Consensus 166 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (316)
.......+..++...+ .... .....+..+..+. ..+.-.....+...+..+.+..... +.-..... +
T Consensus 369 ~LrP~dliw~y~v~~yllg~~-p~~fdll~Wn~D~----t~lPg~~~~e~l~ly~~N~L~~pG~-l~v~G~~i------d 436 (560)
T TIGR01839 369 WMRPNDLIWNYWVNNYLLGNE-PPAFDILYWNNDT----TRLPAAFHGDLLDMFKSNPLTRPDA-LEVCGTPI------D 436 (560)
T ss_pred hcCchhhhHHHHHHHhhcCCC-cchhhHHHHhCcC----ccchHHHHHHHHHHHhcCCCCCCCC-EEECCEEe------c
Confidence 2222222222221111 0000 0000022222222 2233333333444333333322111 11111111 2
Q ss_pred CccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc
Q 021184 245 GAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ 299 (316)
Q Consensus 245 ~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~ 299 (316)
+++|+||++++.|++|.++|++.+... ...+.+.++++..+ +||..-+
T Consensus 437 L~~I~~Pvl~va~~~DHIvPw~s~~~~------~~l~gs~~~fvl~~-gGHIggi 484 (560)
T TIGR01839 437 LKKVKCDSFSVAGTNDHITPWDAVYRS------ALLLGGKRRFVLSN-SGHIQSI 484 (560)
T ss_pred hhcCCCCeEEEecCcCCcCCHHHHHHH------HHHcCCCeEEEecC-CCccccc
Confidence 339999999999999999999988773 34444444777775 5997643
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.79 E-value=2.7e-18 Score=128.61 Aligned_cols=180 Identities=23% Similarity=0.233 Sum_probs=106.5
Q ss_pred CCCeEEEEccCCCChhhHHHHHH-HHhhCCceEEecCCCC------CCC---CCC-----CCCC--CCCCHHHHHHHHHH
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLL-YLSSRGYRAIAPDLRG------YGD---TDA-----PPSI--TSYTALHVVGDLVG 85 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~-----~~~~--~~~~~~~~~~~~~~ 85 (316)
..++||++||+|.+...+..... .+......++++.-|. .|. +-. .... ....+.+.++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 36799999999999977766655 2333346777765542 122 110 0100 01123334445555
Q ss_pred HHHHh-----CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCch
Q 021184 86 LLDEF-----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVA 160 (316)
Q Consensus 86 ~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (316)
+++.. ..+++++.|+|+||++++.++.++|+.+.++|.+++........
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~-------------------------- 146 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL-------------------------- 146 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC--------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc--------------------------
Confidence 55432 44689999999999999999999999999999999865321100
Q ss_pred hhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhcc
Q 021184 161 EEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELL 240 (316)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (316)
. . ...
T Consensus 147 ------------------------------------------------~---------------------~------~~~ 151 (216)
T PF02230_consen 147 ------------------------------------------------E---------------------D------RPE 151 (216)
T ss_dssp ------------------------------------------------H---------------------C------CHC
T ss_pred ------------------------------------------------c---------------------c------ccc
Confidence 0 0 000
Q ss_pred CCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 241 APWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 241 ~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
..-++|++++||++|+++|.+..+... +.+.+...++ ++..+++.||.+.. +..+.+.+||++
T Consensus 152 -----~~~~~pi~~~hG~~D~vvp~~~~~~~~--~~L~~~~~~v-~~~~~~g~gH~i~~----~~~~~~~~~l~~ 214 (216)
T PF02230_consen 152 -----ALAKTPILIIHGDEDPVVPFEWAEKTA--EFLKAAGANV-EFHEYPGGGHEISP----EELRDLREFLEK 214 (216)
T ss_dssp -----CCCTS-EEEEEETT-SSSTHHHHHHHH--HHHHCTT-GE-EEEEETT-SSS--H----HHHHHHHHHHHH
T ss_pred -----ccCCCcEEEEecCCCCcccHHHHHHHH--HHHHhcCCCE-EEEEcCCCCCCCCH----HHHHHHHHHHhh
Confidence 022789999999999999988777654 3465666667 99999999998853 444567777765
No 82
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.78 E-value=2.9e-18 Score=128.91 Aligned_cols=182 Identities=25% Similarity=0.322 Sum_probs=116.2
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCC-CCCCCCCCCC--------CHHHHHHHHHHHHHHh---
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGD-TDAPPSITSY--------TALHVVGDLVGLLDEF--- 90 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~~~~~~~--------~~~~~~~~~~~~~~~~--- 90 (316)
+.|.||++|++.+-......+++.|++.||.|+++|+-+-.. .......... ..+...+++.+.++.+
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 468999999999887888889999999999999999854333 1111100000 1234556666666655
Q ss_pred C---cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhh
Q 021184 91 G---IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQI 167 (316)
Q Consensus 91 ~---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (316)
. .+++.++|+|+||.+++.+|... ..+++++..-|......+
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~~---------------------------------- 137 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPPP---------------------------------- 137 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGGH----------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCcc----------------------------------
Confidence 2 35899999999999999999887 578888887761100000
Q ss_pred hHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCcc
Q 021184 168 DTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQ 247 (316)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
. .. ..+
T Consensus 138 -----~-----------------------------------~~----------------------------------~~~ 143 (218)
T PF01738_consen 138 -----L-----------------------------------ED----------------------------------APK 143 (218)
T ss_dssp -----H-----------------------------------HH----------------------------------GGG
T ss_pred -----h-----------------------------------hh----------------------------------hcc
Confidence 0 00 007
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCcccccc--------chHHHHHHHHHHHhhC
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQE--------KADEVSSHIYDFIKQF 316 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~--------~~~~~~~~i~~fl~~~ 316 (316)
+++|+++++|++|+.++++....+. +.+.+..... ++++++|++|..... ..++-.+.+.+||+++
T Consensus 144 ~~~P~l~~~g~~D~~~~~~~~~~~~--~~l~~~~~~~-~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 144 IKAPVLILFGENDPFFPPEEVEALE--EALKAAGVDV-EVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHH--HHHHCTTTTE-EEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCCEeecCccCCCCCChHHHHHHH--HHHHhcCCcE-EEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999988765543 2344555666 999999999987543 2356778889999875
No 83
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.78 E-value=4.3e-18 Score=128.90 Aligned_cols=292 Identities=18% Similarity=0.314 Sum_probs=178.7
Q ss_pred CCccceEEeeCCeeEEEEecCC--------CCeEEEEccCCCChhhHHHHHHHHhhC---------CceEEecCCCCCCC
Q 021184 2 EKIKHTTVATNGINMHVASIGT--------GPAVLFLHGFPELWYSWRKQLLYLSSR---------GYRAIAPDLRGYGD 64 (316)
Q Consensus 2 ~~~~~~~~~~~g~~i~~~~~g~--------~~~vv~~hG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~ 64 (316)
++..+..+++.|.+||+..... -.|++++|||+|+-..|..++..|.+. -|.|+++.+||+|.
T Consensus 122 n~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygw 201 (469)
T KOG2565|consen 122 NQFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGW 201 (469)
T ss_pred HhhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCccc
Confidence 3456777889999999876542 238999999999999999999888654 27899999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhh--
Q 021184 65 TDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYR-- 142 (316)
Q Consensus 65 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-- 142 (316)
|+.+.. ...+..+.+.-+..++-.+|..++.+-|..+|+.++..+|..+|++|.|+-+-.+...+... .+..+.
T Consensus 202 Sd~~sk-~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~s~~s---~l~~~~~a 277 (469)
T KOG2565|consen 202 SDAPSK-TGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVNSPFS---TLKLLYYA 277 (469)
T ss_pred CcCCcc-CCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccCCcHH---HHHHHHHH
Confidence 998775 67788999999999999999999999999999999999999999999988665544332111 011000
Q ss_pred hhccc--------------------------hhhhhhhcCCCchhhhhh--hhhHHHHHHHHhcCC-CCCCCCCCccccc
Q 021184 143 ALFGD--------------------------DFYICRFQEPGVAEEDFA--QIDTARLIKKFLGGR-SPKPPCVPKEIGF 193 (316)
Q Consensus 143 ~~~~~--------------------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 193 (316)
..+.. .++......|......+. ..+.+..+-.-+..+ ....+..++
T Consensus 278 ~~~~~~~l~sre~~d~~~p~~~~~~~lmeesgYfhiqaTkpdTiGaAl~dsPvGlAaYIleKfstwTn~~~r~l~d---- 353 (469)
T KOG2565|consen 278 GFFPGQFLPSREFQDFHFPVGKKFDQLMEESGYFHIQATKPDTIGAALNDSPVGLAAYILEKFSTWTNTEFRSLPD---- 353 (469)
T ss_pred HhcccccCcchhHHHhhchhHHHHHHHHHhcCceEEecCCcchhhhhhccCchHHHHHHHHHHhhccChhhhhCCC----
Confidence 00000 000000000100000000 011111111111100 000000000
Q ss_pred cCCCCCCCCCCCCC-hHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhh
Q 021184 194 RGLPDLRTLPSWLS-EEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYI 272 (316)
Q Consensus 194 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~ 272 (316)
......++ ++.+...+-.+......+..+.|............++...+.+|+-+-.+..|..-.+...
T Consensus 354 ------ggL~krFt~D~lltnvmiYwlT~si~ss~r~y~e~~~~~~r~~~~~r~~v~vPtg~a~f~~el~~~~~~~---- 423 (469)
T KOG2565|consen 354 ------GGLNKRFTMDELLTNVMIYWLTNSITSSQRFYDESFNQRQRDLALDRVQVRVPTGCARFKFELWHTSDDV---- 423 (469)
T ss_pred ------CchheeecHHHHhhhhhhheecCcchhhHHHHHHHHhHHHHHHHhhccccccchhhhccccchhhCcHHH----
Confidence 00111111 2222333333333344444444433222222222233337889999999998887544432
Q ss_pred hccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 273 QNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 273 ~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
++...+|.+.....+++||+..+|.|..+++.+..|++.
T Consensus 424 ----lrdky~nL~~~s~~~~GGhFaalE~p~~La~D~~~FV~~ 462 (469)
T KOG2565|consen 424 ----LRDKYPNLTHSSYHPKGGHFAALEDPKKLAQDFFSFVEK 462 (469)
T ss_pred ----HhhhcccceeeEeccCCcchhhhhCcHHHHHHHHHHHHH
Confidence 567888886778888999999999999999999999875
No 84
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.78 E-value=2.4e-17 Score=130.97 Aligned_cols=272 Identities=12% Similarity=0.125 Sum_probs=154.6
Q ss_pred CeEEEEccCCCChhhH-HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechh
Q 021184 25 PAVLFLHGFPELWYSW-RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWG 103 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
|+||++..+.+..... +.+++.|.+ |+.|+..|+..-+..+... ..++++++++-+.+.++++|.+ ++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~--~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLSA--GKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhc--CCCCHHHHHHHHHHHHHHhCCC-CcEEEEchh
Confidence 7999999998766544 678899999 9999999998777554333 5779999999999999999877 999999999
Q ss_pred HHHHHHHHHhC-----ccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh--------------cCCCch-hhh
Q 021184 104 ALIAWYFCLLR-----PDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF--------------QEPGVA-EED 163 (316)
Q Consensus 104 g~~a~~~a~~~-----p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~-~~~ 163 (316)
|..++.+++.. |.+++++++++++...... ...+..+.......++.... ..|+.. ...
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~-p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~ 257 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS-PTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAG 257 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC-CchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHH
Confidence 99988776654 6679999999998876431 12222222211111111111 011110 011
Q ss_pred hhhhhHH---HHHHHHhcCCC-CCCCCC-CccccccCCCCCCCCCCCCChHHH-HHHHHhhcccccccccceeeccCcch
Q 021184 164 FAQIDTA---RLIKKFLGGRS-PKPPCV-PKEIGFRGLPDLRTLPSWLSEEDV-NYYASKFSQKGFTGGLNYYRCLDLNW 237 (316)
Q Consensus 164 ~~~~~~~---~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (316)
|...... ....+++.+.. .+.... ....+.+.+...... +.+.. +.....+....+... .+.......
T Consensus 258 F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dl----pge~y~~~v~~vf~~n~L~~G--~l~v~G~~V 331 (406)
T TIGR01849 258 FISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDM----TAEFYLQTIDVVFQQFLLPQG--KFIVEGKRV 331 (406)
T ss_pred HHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCC----cHHHHHHHHHHHHHhCCccCC--cEEECCEEe
Confidence 1100000 01111111110 000000 000012221111111 11221 112222222222211 111111111
Q ss_pred hccCCCCCcccc-ccEEEEeeCCCcccCCCcchhhhhccCccccCCCc-eEEEEEcCCCccccc---cchHHHHHHHHHH
Q 021184 238 ELLAPWTGAQIK-IPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGL-QEVIVMEGVAHFINQ---EKADEVSSHIYDF 312 (316)
Q Consensus 238 ~~~~~~~~~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~gH~~~~---~~~~~~~~~i~~f 312 (316)
++++|+ +|+|.+.|++|.++|+..+....+ +...++.. ++.+..+++||...+ ..++++...|.+|
T Consensus 332 ------dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~---l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~w 402 (406)
T TIGR01849 332 ------DPGAITRVALLTVEGENDDISGLGQTKAALR---LCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREF 402 (406)
T ss_pred ------cHHHCcccceEEEeccCCCcCCHHHhHHHHH---HhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHH
Confidence 123898 999999999999999998877432 33234432 357777789998855 3568899999999
Q ss_pred HhhC
Q 021184 313 IKQF 316 (316)
Q Consensus 313 l~~~ 316 (316)
|.++
T Consensus 403 l~~~ 406 (406)
T TIGR01849 403 IRRN 406 (406)
T ss_pred HHhC
Confidence 9874
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.75 E-value=8e-17 Score=126.79 Aligned_cols=123 Identities=21% Similarity=0.270 Sum_probs=78.9
Q ss_pred ccceEEeeCCeeEEEEec---CC--CCeEEEEccCCCChhhHHHH-HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHH
Q 021184 4 IKHTTVATNGINMHVASI---GT--GPAVLFLHGFPELWYSWRKQ-LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTAL 77 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~---g~--~~~vv~~hG~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~ 77 (316)
+++..+...|.+|..+.. ++ .|+||++.|+-+-...+..+ .+.|.+.|+.++++|.||.|.|....- ..+.+
T Consensus 165 i~~v~iP~eg~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l--~~D~~ 242 (411)
T PF06500_consen 165 IEEVEIPFEGKTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL--TQDSS 242 (411)
T ss_dssp EEEEEEEETTCEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S---S-CC
T ss_pred cEEEEEeeCCcEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC--CcCHH
Confidence 345556677777753322 22 35777777777767665544 467899999999999999999865432 12223
Q ss_pred HHHHHHHHHHHHh---CcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 78 HVVGDLVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 78 ~~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.....+.+.+... +..+|.++|.|+||.+|.++|..++++++++|..+++.
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~v 296 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPV 296 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchH
Confidence 3444444444443 45689999999999999999999988999999999875
No 86
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.74 E-value=3.1e-16 Score=108.26 Aligned_cols=171 Identities=20% Similarity=0.281 Sum_probs=118.2
Q ss_pred CCeEEEEccCC-----CChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc-e-EE
Q 021184 24 GPAVLFLHGFP-----ELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE-Q-VF 96 (316)
Q Consensus 24 ~~~vv~~hG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~ 96 (316)
.|..|++|.-+ .+......++..|.+.||.++.+|+||-|+|.+..+...-..+|.. ...+++...... + ..
T Consensus 28 ~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~-aaldW~~~~hp~s~~~~ 106 (210)
T COG2945 28 APIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAA-AALDWLQARHPDSASCW 106 (210)
T ss_pred CceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHH-HHHHHHHhhCCCchhhh
Confidence 57888888643 2333556778899999999999999999999987753322333333 333334333322 3 47
Q ss_pred EEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHH
Q 021184 97 LVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKF 176 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
+.|+|+|+++++.+|.+.|+ ....+.+.+......- .
T Consensus 107 l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~df------------------------------------------s 143 (210)
T COG2945 107 LAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAYDF------------------------------------------S 143 (210)
T ss_pred hcccchHHHHHHHHHHhccc-ccceeeccCCCCchhh------------------------------------------h
Confidence 89999999999999999986 4555555543321000 0
Q ss_pred hcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccccEEEEe
Q 021184 177 LGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMV 256 (316)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~ 256 (316)
.++...+|.++|+
T Consensus 144 -------------------------------------------------------------------~l~P~P~~~lvi~ 156 (210)
T COG2945 144 -------------------------------------------------------------------FLAPCPSPGLVIQ 156 (210)
T ss_pred -------------------------------------------------------------------hccCCCCCceeEe
Confidence 0016788999999
Q ss_pred eCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 257 GDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 257 G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
|+.|.+++.....++ ++. ... +++++++++|+.+- +-+.+.+.|.+||.
T Consensus 157 g~~Ddvv~l~~~l~~------~~~-~~~-~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 157 GDADDVVDLVAVLKW------QES-IKI-TVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred cChhhhhcHHHHHHh------hcC-CCC-ceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 999999988776653 233 344 78899999999654 55778899999983
No 87
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.74 E-value=4.7e-17 Score=121.62 Aligned_cols=108 Identities=14% Similarity=0.112 Sum_probs=74.6
Q ss_pred CCCCeEEEEccCCCChhhHH---HHHHHHhhCCceEEecCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHh
Q 021184 22 GTGPAVLFLHGFPELWYSWR---KQLLYLSSRGYRAIAPDLRGYGDTDAPPS--------ITSYTALHVVGDLVGLLDEF 90 (316)
Q Consensus 22 g~~~~vv~~hG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~~~~~~~ 90 (316)
++.|+||++||.+++...+. .+...+.+.||.|+++|.+|++.+....+ .......++.+.+..+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 34689999999998877665 34555556799999999999875432110 00111222222222222332
Q ss_pred --CcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 91 --GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 91 --~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+.++++++|||+||.+++.++.++|+.+.+++.+++...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 335899999999999999999999999999988887653
No 88
>PRK10162 acetyl esterase; Provisional
Probab=99.73 E-value=1.2e-15 Score=120.90 Aligned_cols=101 Identities=18% Similarity=0.238 Sum_probs=72.9
Q ss_pred CCeEEEEccCC---CChhhHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhCc--ce
Q 021184 24 GPAVLFLHGFP---ELWYSWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGL---LDEFGI--EQ 94 (316)
Q Consensus 24 ~~~vv~~hG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~ 94 (316)
.|+||++||.+ ++...|..++..|++ .|+.|+++|+|.......+ ...++..+.+..+ .+.++. ++
T Consensus 81 ~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p-----~~~~D~~~a~~~l~~~~~~~~~d~~~ 155 (318)
T PRK10162 81 QATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFP-----QAIEEIVAVCCYFHQHAEDYGINMSR 155 (318)
T ss_pred CCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCC-----CcHHHHHHHHHHHHHhHHHhCCChhH
Confidence 58999999977 566678888888887 4899999999975443222 2344444333333 334443 58
Q ss_pred EEEEEechhHHHHHHHHHhC------ccccceeeeeccccc
Q 021184 95 VFLVGHDWGALIAWYFCLLR------PDRVKALVNLSVVFR 129 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~------p~~v~~~il~~~~~~ 129 (316)
++++|+|+||.+++.++... +.++.+++++.|...
T Consensus 156 i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 156 IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred EEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 99999999999999988753 356889999988654
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.73 E-value=6.6e-16 Score=120.84 Aligned_cols=213 Identities=24% Similarity=0.251 Sum_probs=111.7
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCC-CCCCCC-----------------CCCCCHHHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGD-TDAPPS-----------------ITSYTALHVVGDLVG 85 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~~~-----------------~~~~~~~~~~~~~~~ 85 (316)
-|.||.+||.++....+.... .++..||.|+.+|.||+|. +..... ...+-+..+..|...
T Consensus 83 ~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 83 LPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp EEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred cCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 478999999999877776544 4678899999999999993 311100 111222334455555
Q ss_pred HHHHh------CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCc
Q 021184 86 LLDEF------GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGV 159 (316)
Q Consensus 86 ~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
.++.+ +.++|.+.|.|+||.+++.+|+..| +|+++++..|...- .......-. ...
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------~~~~~~~~~-------~~~--- 223 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------FRRALELRA-------DEG--- 223 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------HHHHHHHT---------ST---
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------hhhhhhcCC-------ccc---
Confidence 55544 4468999999999999999999987 69999988875432 000000000 000
Q ss_pred hhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhc
Q 021184 160 AEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWEL 239 (316)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
.-..+..++...... ...++.+-.....+ ...+..
T Consensus 224 ---------~y~~~~~~~~~~d~~---------------------~~~~~~v~~~L~Y~------------D~~nfA--- 258 (320)
T PF05448_consen 224 ---------PYPEIRRYFRWRDPH---------------------HEREPEVFETLSYF------------DAVNFA--- 258 (320)
T ss_dssp ---------TTHHHHHHHHHHSCT---------------------HCHHHHHHHHHHTT-------------HHHHG---
T ss_pred ---------cHHHHHHHHhccCCC---------------------cccHHHHHHHHhhh------------hHHHHH---
Confidence 000011111100000 00001111111111 111100
Q ss_pred cCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHH-HHHHHHHHhhC
Q 021184 240 LAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEV-SSHIYDFIKQF 316 (316)
Q Consensus 240 ~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~-~~~i~~fl~~~ 316 (316)
++|+||+++-.|-.|.+|||+.....+ +.++..|++.++|..||-... ++ .+...+||++|
T Consensus 259 ------~ri~~pvl~~~gl~D~~cPP~t~fA~y------N~i~~~K~l~vyp~~~He~~~----~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 259 ------RRIKCPVLFSVGLQDPVCPPSTQFAAY------NAIPGPKELVVYPEYGHEYGP----EFQEDKQLNFLKEH 320 (320)
T ss_dssp ------GG--SEEEEEEETT-SSS-HHHHHHHH------CC--SSEEEEEETT--SSTTH----HHHHHHHHHHHHH-
T ss_pred ------HHcCCCEEEEEecCCCCCCchhHHHHH------hccCCCeeEEeccCcCCCchh----hHHHHHHHHHHhcC
Confidence 189999999999999999999887755 455555699999999997543 33 56777888765
No 90
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=2.5e-15 Score=112.78 Aligned_cols=178 Identities=22% Similarity=0.312 Sum_probs=131.1
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC-CCCCCCCCC---------CCCCHHHHHHHHHHHHHHhC---
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY-GDTDAPPSI---------TSYTALHVVGDLVGLLDEFG--- 91 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~---------~~~~~~~~~~~~~~~~~~~~--- 91 (316)
|.||++|++.+-....+.+++.|+..||.|+++|+-+. |.+....+. ...+..+...|+.+.++.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 79999999999989999999999999999999998663 333221100 01233677778888887762
Q ss_pred ---cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhh
Q 021184 92 ---IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQID 168 (316)
Q Consensus 92 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (316)
.++|.++|+||||.+++.++.+.| .+++.+..-+.......
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~----------------------------------- 151 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT----------------------------------- 151 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc-----------------------------------
Confidence 457999999999999999999988 68888877775432111
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccc
Q 021184 169 TARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQI 248 (316)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (316)
.. ..++
T Consensus 152 ----------------------------------------~~----------------------------------~~~~ 157 (236)
T COG0412 152 ----------------------------------------AD----------------------------------APKI 157 (236)
T ss_pred ----------------------------------------cc----------------------------------cccc
Confidence 00 0189
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccc-----------hHHHHHHHHHHHhh
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEK-----------ADEVSSHIYDFIKQ 315 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~-----------~~~~~~~i~~fl~~ 315 (316)
++|+|+..|+.|..+|......+. ..+.+..... ++.+++++.|..+-+. .+.-.+.+.+||++
T Consensus 158 ~~pvl~~~~~~D~~~p~~~~~~~~--~~~~~~~~~~-~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 158 KVPVLLHLAGEDPYIPAADVDALA--AALEDAGVKV-DLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred cCcEEEEecccCCCCChhHHHHHH--HHHHhcCCCe-eEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999988766643 2233333355 8999999889876432 25677888888875
No 91
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.70 E-value=2.3e-16 Score=126.89 Aligned_cols=105 Identities=19% Similarity=0.192 Sum_probs=82.3
Q ss_pred CCCeEEEEccCCCCh--hhHHH-HHHHHhh--CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 021184 23 TGPAVLFLHGFPELW--YSWRK-QLLYLSS--RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF------G 91 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~--~~~~~-~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~ 91 (316)
++|++|++||++++. ..|.. +.+.|.. ..++|+++|++|+|.+..+.. ......+++++.++++.+ +
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a--~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTS--AAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccc--cccHHHHHHHHHHHHHHHHHhhCCC
Confidence 378999999998754 35665 5556542 259999999999998865542 234466667777777754 3
Q ss_pred cceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.++++++||||||++|..++...|++|.++++++|+..
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 67999999999999999999999999999999999643
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.69 E-value=5e-16 Score=112.63 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=116.7
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC--CCC--CCCCCCCCCCHH-------HHHHHHHHHHHHhCc
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY--GDT--DAPPSITSYTAL-------HVVGDLVGLLDEFGI 92 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s--~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 92 (316)
.|+||++||+|++...+.+....+..+ ..++.+--+-- |.- ....+...++.+ .+++.+..+.+..++
T Consensus 18 ~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi 96 (207)
T COG0400 18 APLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGI 96 (207)
T ss_pred CcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCC
Confidence 568999999999998888866666665 66666532210 100 000111222333 344445555555565
Q ss_pred --ceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhhhHH
Q 021184 93 --EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQIDTA 170 (316)
Q Consensus 93 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (316)
++++++|+|.||.+++.+..++|+.++++|++++........
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~------------------------------------ 140 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL------------------------------------ 140 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc------------------------------------
Confidence 689999999999999999999999999999999865432100
Q ss_pred HHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccccc
Q 021184 171 RLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQIKI 250 (316)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (316)
. ...-..
T Consensus 141 ---------------------------------------------------------------------~----~~~~~~ 147 (207)
T COG0400 141 ---------------------------------------------------------------------L----PDLAGT 147 (207)
T ss_pred ---------------------------------------------------------------------c----cccCCC
Confidence 0 004588
Q ss_pred cEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHH
Q 021184 251 PVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHI 309 (316)
Q Consensus 251 Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
|+++++|+.|++||...+.+.. +.+.+..-++ +...++ .||....+.-+...+.+
T Consensus 148 pill~hG~~Dpvvp~~~~~~l~--~~l~~~g~~v-~~~~~~-~GH~i~~e~~~~~~~wl 202 (207)
T COG0400 148 PILLSHGTEDPVVPLALAEALA--EYLTASGADV-EVRWHE-GGHEIPPEELEAARSWL 202 (207)
T ss_pred eEEEeccCcCCccCHHHHHHHH--HHHHHcCCCE-EEEEec-CCCcCCHHHHHHHHHHH
Confidence 9999999999999998877754 3355555566 899998 69998765555444433
No 93
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.68 E-value=2.7e-16 Score=122.03 Aligned_cols=254 Identities=12% Similarity=0.052 Sum_probs=142.2
Q ss_pred CCeEEEEccCCCChhhH-----HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHhCcc
Q 021184 24 GPAVLFLHGFPELWYSW-----RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVV-----GDLVGLLDEFGIE 93 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 93 (316)
++|++++|.+-.....+ ..++..|.++|+.|+.+++++-..+... .++++++ +.+..+.+..+.+
T Consensus 107 ~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~-----~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 107 KRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA-----KNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh-----ccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 56999999987766554 4678899999999999999987776653 3555555 4444555556878
Q ss_pred eEEEEEechhHHHHHHHHHhCccc-cceeeeecccccCCCCCCCch---hhhhhhccchhhhhhhcCCCchhhhhhhhhH
Q 021184 94 QVFLVGHDWGALIAWYFCLLRPDR-VKALVNLSVVFRSRNPATKPV---DQYRALFGDDFYICRFQEPGVAEEDFAQIDT 169 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (316)
+|.++|+|.||.++..+++.++.+ |++++++.+......+....+ ......+..................|.....
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrp 261 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRP 261 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCc
Confidence 999999999999999999999887 999999998876544322111 0011111111111111111112222322222
Q ss_pred HHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhh-cccccccccceeeccCcchhccCCCCCccc
Q 021184 170 ARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKF-SQKGFTGGLNYYRCLDLNWELLAPWTGAQI 248 (316)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (316)
..++...+.+..........-....+..+ ...++......+...+ ....+.. ..+.-.....++ .+|
T Consensus 262 ndliw~~fV~nyl~ge~pl~fdllyWn~d----st~~~~~~~~~~Lrn~y~~N~l~~--g~~~v~G~~VdL------~~I 329 (445)
T COG3243 262 NDLIWNYFVNNYLDGEQPLPFDLLYWNAD----STRLPGAAHSEYLRNFYLENRLIR--GGLEVSGTMVDL------GDI 329 (445)
T ss_pred cccchHHHHHHhcCCCCCCchhHHHhhCC----CccCchHHHHHHHHHHHHhChhhc--cceEECCEEech------hhc
Confidence 22222222111111000000111111111 1233444444444322 2222222 111222222222 389
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccc
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEK 301 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~ 301 (316)
+||++++.|++|.++|.+.+.. .++.+++.++++.. ++||...+=+
T Consensus 330 t~pvy~~a~~~DhI~P~~Sv~~------g~~l~~g~~~f~l~-~sGHIa~vVN 375 (445)
T COG3243 330 TCPVYNLAAEEDHIAPWSSVYL------GARLLGGEVTFVLS-RSGHIAGVVN 375 (445)
T ss_pred ccceEEEeecccccCCHHHHHH------HHHhcCCceEEEEe-cCceEEEEeC
Confidence 9999999999999999887766 55667775355555 5799875433
No 94
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.67 E-value=9.7e-16 Score=108.77 Aligned_cols=88 Identities=25% Similarity=0.291 Sum_probs=63.8
Q ss_pred EEEEccCCCChh-hHHHHH-HHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhH
Q 021184 27 VLFLHGFPELWY-SWRKQL-LYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGA 104 (316)
Q Consensus 27 vv~~hG~~~~~~-~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
|+++||++++.. .|..+. +.|... ++|-..|+ + .-+.+++...+.+.+.... +++++||||+||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D------NPDLDEWVQALDQAIDAID-EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHH
Confidence 689999998764 677665 456555 78887776 1 2267888888888888765 569999999999
Q ss_pred HHHHHHH-HhCccccceeeeecccc
Q 021184 105 LIAWYFC-LLRPDRVKALVNLSVVF 128 (316)
Q Consensus 105 ~~a~~~a-~~~p~~v~~~il~~~~~ 128 (316)
..+++++ .....+|.|++|++|+.
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFD 91 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--S
T ss_pred HHHHHHHhhcccccccEEEEEcCCC
Confidence 9999999 67778999999999864
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.67 E-value=2.2e-16 Score=121.75 Aligned_cols=115 Identities=19% Similarity=0.256 Sum_probs=83.4
Q ss_pred CeeEEEEecCC-CCeEEEEccCCCCh-hhHHH-HHHHHh-hCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021184 13 GINMHVASIGT-GPAVLFLHGFPELW-YSWRK-QLLYLS-SRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD 88 (316)
Q Consensus 13 g~~i~~~~~g~-~~~vv~~hG~~~~~-~~~~~-~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+..+.+..... +|++|++||++++. ..|.. +.+.+. ..+++|+++|+++++.+..+. ...+...+.+++.++++
T Consensus 24 ~~~~~~~~f~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~--a~~~~~~v~~~la~~l~ 101 (275)
T cd00707 24 PSSLKNSNFNPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQ--AVNNTRVVGAELAKFLD 101 (275)
T ss_pred hhhhhhcCCCCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHH--HHHhHHHHHHHHHHHHH
Confidence 44455555544 78999999999887 56654 444454 457999999999874332211 22344555556666665
Q ss_pred Hh------CcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 89 EF------GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 89 ~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.+ +.++++++||||||++|..++.++|++|.++++++|+..
T Consensus 102 ~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 102 FLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 54 446899999999999999999999999999999998753
No 96
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.66 E-value=2.8e-14 Score=108.48 Aligned_cols=100 Identities=13% Similarity=0.122 Sum_probs=83.9
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc-eEEEEEechh
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE-QVFLVGHDWG 103 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~G 103 (316)
++|+++|+.+++...|..+++.|....+.|+.++.+|.+.... ...+++++++...+.+.....+ +++|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEP----PPDSIEELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSH----EESSHHHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCC----CCCCHHHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 4799999999999999999999987558999999999983222 3568999999999888887666 9999999999
Q ss_pred HHHHHHHHHhC---ccccceeeeecccc
Q 021184 104 ALIAWYFCLLR---PDRVKALVNLSVVF 128 (316)
Q Consensus 104 g~~a~~~a~~~---p~~v~~~il~~~~~ 128 (316)
|.+|+.+|.+- ...+..++++++.+
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCC
Confidence 99999999864 33588999999754
No 97
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.66 E-value=4.2e-15 Score=118.07 Aligned_cols=297 Identities=18% Similarity=0.201 Sum_probs=165.6
Q ss_pred eEEeeCCeeEEEEec----CCCCeEEEEccCCCChhhHH------HHHHHHhhCCceEEecCCCCCCCCCCCC-------
Q 021184 7 TTVATNGINMHVASI----GTGPAVLFLHGFPELWYSWR------KQLLYLSSRGYRAIAPDLRGYGDTDAPP------- 69 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~----g~~~~vv~~hG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~~------- 69 (316)
...+.||.-+....- +++|+|++.||+.+++..|- .++=.|+++||.|+.-+.||.-.|....
T Consensus 52 ~V~T~DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~ 131 (403)
T KOG2624|consen 52 EVTTEDGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSD 131 (403)
T ss_pred EEEccCCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCC
Confidence 344557875543322 45799999999999999884 3455789999999999999977774321
Q ss_pred -CCCCCCHHHHHH-HHHHHHHHh----CcceEEEEEechhHHHHHHHHHhCcc---ccceeeeecccccCCCCCCCchhh
Q 021184 70 -SITSYTALHVVG-DLVGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPD---RVKALVNLSVVFRSRNPATKPVDQ 140 (316)
Q Consensus 70 -~~~~~~~~~~~~-~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~ 140 (316)
....+++++++. |+-+.++++ +.++++.+|||+|+......++..|+ +|+.+++++|+.... ........
T Consensus 132 ~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k-~~~~~~~~ 210 (403)
T KOG2624|consen 132 KEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPK-HIKSLLNK 210 (403)
T ss_pred cceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhc-ccccHHHH
Confidence 123456777654 666666654 66799999999999999999998876 799999999988543 11111111
Q ss_pred hhhhc--cchhhhhhhcCCC-----chhhhhhhh------hHHHHHHHHhcCC-CCCCCCCCccccccCC--CCCCCCCC
Q 021184 141 YRALF--GDDFYICRFQEPG-----VAEEDFAQI------DTARLIKKFLGGR-SPKPPCVPKEIGFRGL--PDLRTLPS 204 (316)
Q Consensus 141 ~~~~~--~~~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~ 204 (316)
....+ ........+.... .....+... ........++... ..... .+.... ......+.
T Consensus 211 ~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~-----~~n~~~~~~~~~h~pa 285 (403)
T KOG2624|consen 211 FLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSN-----NWNTTLLPVYLAHLPA 285 (403)
T ss_pred hhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchH-----hhhhcccchhhccCCC
Confidence 11110 0000011111100 000001000 0111111111100 00000 000000 01112233
Q ss_pred CCChHHHHHHHHhhcccccccccceee-cc-CcchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCC
Q 021184 205 WLSEEDVNYYASKFSQKGFTGGLNYYR-CL-DLNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVP 282 (316)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~ 282 (316)
..+-..+..+........++..-.-.. .. ...........+.++++|+.+.+|+.|.++.++++.... ...+
T Consensus 286 gtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~------~~~~ 359 (403)
T KOG2624|consen 286 GTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILL------LVLP 359 (403)
T ss_pred CccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHH------Hhcc
Confidence 345566677776655544332111110 00 001111111233488999999999999999999988643 3444
Q ss_pred Cce--EEEEEcCCCccccc---cchHHHHHHHHHHHhh
Q 021184 283 GLQ--EVIVMEGVAHFINQ---EKADEVSSHIYDFIKQ 315 (316)
Q Consensus 283 ~~~--~~~~~~~~gH~~~~---~~~~~~~~~i~~fl~~ 315 (316)
++. ..+.+++-.|+-++ +.++++.+.|.+.++.
T Consensus 360 ~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~ 397 (403)
T KOG2624|consen 360 NSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRL 397 (403)
T ss_pred cccccccccCCCccceeeeeccCcHHHHHHHHHHHHHh
Confidence 441 22337888897643 6689999999998874
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.65 E-value=1.5e-14 Score=109.49 Aligned_cols=99 Identities=19% Similarity=0.245 Sum_probs=65.5
Q ss_pred CCeEEEEccCCCCh---hhHHHHHHHHhhCCceEEecCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------
Q 021184 24 GPAVLFLHGFPELW---YSWRKQLLYLSSRGYRAIAPDLR----GYGDTDAPPSITSYTALHVVGDLVGLLDEF------ 90 (316)
Q Consensus 24 ~~~vv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------ 90 (316)
...||||.|++..- .....+++.|.+.||.|+-+-++ |+|. .+++.-++||.++++++
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~---------~SL~~D~~eI~~~v~ylr~~~~g 103 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGT---------SSLDRDVEEIAQLVEYLRSEKGG 103 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S-----------HHHHHHHHHHHHHHHHHHS--
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCc---------chhhhHHHHHHHHHHHHHHhhcc
Confidence 44899999998644 35677888998789999988765 3443 36777788888777765
Q ss_pred --CcceEEEEEechhHHHHHHHHHhCc-----cccceeeeecccccCC
Q 021184 91 --GIEQVFLVGHDWGALIAWYFCLLRP-----DRVKALVNLSVVFRSR 131 (316)
Q Consensus 91 --~~~~~~l~G~S~Gg~~a~~~a~~~p-----~~v~~~il~~~~~~~~ 131 (316)
+.++|+|+|||.|+.-+++|+.... ..|+++|+-+|+....
T Consensus 104 ~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 104 HFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp ----S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TT
T ss_pred ccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChh
Confidence 2458999999999999999998753 4699999999987653
No 99
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.65 E-value=7.2e-15 Score=125.09 Aligned_cols=116 Identities=17% Similarity=0.266 Sum_probs=90.4
Q ss_pred eCCeeEEEEec-----CCCCeEEEEccCCCChh---hH-HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHH
Q 021184 11 TNGINMHVASI-----GTGPAVLFLHGFPELWY---SW-RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVG 81 (316)
Q Consensus 11 ~~g~~i~~~~~-----g~~~~vv~~hG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~ 81 (316)
.||.+|++... ++.|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|..... ..+ ...++
T Consensus 4 ~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~--~~~-~~~~~ 80 (550)
T TIGR00976 4 RDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFD--LLG-SDEAA 80 (550)
T ss_pred CCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceE--ecC-cccch
Confidence 47888875443 23589999999987653 12 234567888999999999999999987652 223 45777
Q ss_pred HHHHHHHHhCc-----ceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 82 DLVGLLDEFGI-----EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 82 ~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
|+.++++.+.. .++.++|+|+||.+++.+|..+|.+++++|..++...
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 88888877632 4899999999999999999999999999999887654
No 100
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.64 E-value=3.7e-15 Score=108.58 Aligned_cols=119 Identities=26% Similarity=0.348 Sum_probs=82.4
Q ss_pred EeeCCeeEEEEe------cCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCC----CCC--------
Q 021184 9 VATNGINMHVAS------IGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDA----PPS-------- 70 (316)
Q Consensus 9 ~~~~g~~i~~~~------~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~----~~~-------- 70 (316)
...+|.+|.-+. .|.-|.||-.||++++...|..+.. ++..||.|+.+|.||.|.|.. ++.
T Consensus 62 ~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~m 140 (321)
T COG3458 62 TGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFM 140 (321)
T ss_pred eccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCcee
Confidence 344666665332 1446899999999999988765543 455699999999999998832 110
Q ss_pred -------CCCCCHHHHHHHHHHHHHH------hCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 71 -------ITSYTALHVVGDLVGLLDE------FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 71 -------~~~~~~~~~~~~~~~~~~~------~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
...+-+.....|+..+++. ++.++|.+.|.|.||.+++.+++..| ++++++++-|...
T Consensus 141 trGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~ 211 (321)
T COG3458 141 TRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLS 211 (321)
T ss_pred EeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccc
Confidence 0111122233444444443 35679999999999999999999987 7999998887653
No 101
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.61 E-value=8.7e-15 Score=125.13 Aligned_cols=109 Identities=22% Similarity=0.237 Sum_probs=87.8
Q ss_pred ceEEeeCCeeEEEEecCCC-----------CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCC------
Q 021184 6 HTTVATNGINMHVASIGTG-----------PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAP------ 68 (316)
Q Consensus 6 ~~~~~~~g~~i~~~~~g~~-----------~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~------ 68 (316)
...+..++.+++|...|.+ |+||++||++++...|..+++.|.++||+|+++|+||||.|...
T Consensus 420 ~~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 420 VLLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred eEEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccc
Confidence 3445667777777665442 48999999999999999999999989999999999999999443
Q ss_pred ----CCCC-----------CCCHHHHHHHHHHHHHHhC----------------cceEEEEEechhHHHHHHHHHhC
Q 021184 69 ----PSIT-----------SYTALHVVGDLVGLLDEFG----------------IEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 69 ----~~~~-----------~~~~~~~~~~~~~~~~~~~----------------~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.... +.++++.+.|+..++..++ ..+++++||||||.++..++...
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 1101 1378999999999988876 24899999999999999999753
No 102
>PRK10115 protease 2; Provisional
Probab=99.60 E-value=5.3e-14 Score=121.78 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=91.2
Q ss_pred eeCCeeEEEE-ec-------CCCCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCC---C---CCCCC
Q 021184 10 ATNGINMHVA-SI-------GTGPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDA---P---PSITS 73 (316)
Q Consensus 10 ~~~g~~i~~~-~~-------g~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---~---~~~~~ 73 (316)
+.||.+|.+. .. ++.|.||++||..+... .|......|.++||.|+.++.||-|.=.. . .....
T Consensus 423 s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~ 502 (686)
T PRK10115 423 ARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKK 502 (686)
T ss_pred CCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCC
Confidence 4589888752 21 33689999999887663 46666778899999999999999654321 1 11123
Q ss_pred CCHHHHHHHHHHHHHH--hCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 74 YTALHVVGDLVGLLDE--FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 74 ~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.+++|+++.+..+++. ...+++.+.|.|.||.++..++.++|++++++|+..|....
T Consensus 503 ~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~ 561 (686)
T PRK10115 503 NTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDV 561 (686)
T ss_pred CcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhH
Confidence 5677777777777654 24568999999999999999999999999999999887643
No 103
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.59 E-value=8.9e-15 Score=89.22 Aligned_cols=75 Identities=23% Similarity=0.336 Sum_probs=64.4
Q ss_pred CeeEEEEecCC----CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021184 13 GINMHVASIGT----GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD 88 (316)
Q Consensus 13 g~~i~~~~~g~----~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
|.+|+++.+.+ +.+|+++||++.++..|..+++.|+++||.|+++|+||||.|..... ...+++++++|+..+++
T Consensus 1 G~~L~~~~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg-~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 1 GTKLFYRRWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRG-HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCccc-ccCCHHHHHHHHHHHhC
Confidence 56788877653 45899999999999999999999999999999999999999986553 34589999999988764
No 104
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.58 E-value=6.8e-14 Score=103.94 Aligned_cols=106 Identities=33% Similarity=0.422 Sum_probs=76.3
Q ss_pred cCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-H------hCcc
Q 021184 21 IGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD-E------FGIE 93 (316)
Q Consensus 21 ~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~ 93 (316)
.|.-|+|||+||+......|..+.++++++||-|+.+|+...+...... ......+.++.+.+-++ . .+..
T Consensus 14 ~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~--~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s 91 (259)
T PF12740_consen 14 AGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTD--EVASAAEVIDWLAKGLESKLPLGVKPDFS 91 (259)
T ss_pred CCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcch--hHHHHHHHHHHHHhcchhhcccccccccc
Confidence 3557999999999988788999999999999999999966543321111 11122222222222111 1 1445
Q ss_pred eEEEEEechhHHHHHHHHHhC-----ccccceeeeecccc
Q 021184 94 QVFLVGHDWGALIAWYFCLLR-----PDRVKALVNLSVVF 128 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~-----p~~v~~~il~~~~~ 128 (316)
++.+.|||-||-++..++..+ +.+++++++++|+-
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 899999999999999999987 55899999999975
No 105
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.58 E-value=2.4e-13 Score=90.95 Aligned_cols=104 Identities=16% Similarity=0.183 Sum_probs=79.0
Q ss_pred eEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEE
Q 021184 26 AVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDT-----DAPPSITSYTALHVVGDLVGLLDEFGIEQVFLV 98 (316)
Q Consensus 26 ~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
+||+.||.+.+.+ .....+..|+..|+.|..++++..-.. .+++. ...-...+...+.++...+...+.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~-~~t~~~~~~~~~aql~~~l~~gpLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPG-SGTLNPEYIVAIAQLRAGLAEGPLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCc-cccCCHHHHHHHHHHHhcccCCceeec
Confidence 7999999987655 577888999999999999998754322 22222 333445677778888887776799999
Q ss_pred EechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 99 GHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 99 G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
|+||||-++...+..-.-.|+++++++=++.+
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhp 126 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHP 126 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCC
Confidence 99999999998888755569999998865543
No 106
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.54 E-value=1.3e-12 Score=93.79 Aligned_cols=88 Identities=27% Similarity=0.420 Sum_probs=68.3
Q ss_pred EEEEccCCCChhhHHH--HHHHHhhCC--ceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEech
Q 021184 27 VLFLHGFPELWYSWRK--QLLYLSSRG--YRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~--~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
|+++||+.++..+... +.+.+.+.+ ..+.++|++ ....+..+.+.++++....+.+.++|.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------~~p~~a~~~l~~~i~~~~~~~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------PFPEEAIAQLEQLIEELKPENVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------cCHHHHHHHHHHHHHhCCCCCeEEEEECh
Confidence 7999999998877643 445566554 456666654 35777788889999988877799999999
Q ss_pred hHHHHHHHHHhCccccceeeeecccccC
Q 021184 103 GALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
||..|..+|.+++ +++ |+++|+..+
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCH
Confidence 9999999999986 445 889987654
No 107
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.53 E-value=1.3e-13 Score=97.88 Aligned_cols=194 Identities=18% Similarity=0.327 Sum_probs=126.3
Q ss_pred EEeeCCeeEEEEecCCCC-eEEEEccCCCChh-hHHHHHHHHhhCCceEEecCCC-CCCCCCCCCC------CCCCCHHH
Q 021184 8 TVATNGINMHVASIGTGP-AVLFLHGFPELWY-SWRKQLLYLSSRGYRAIAPDLR-GYGDTDAPPS------ITSYTALH 78 (316)
Q Consensus 8 ~~~~~g~~i~~~~~g~~~-~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~~~~------~~~~~~~~ 78 (316)
..+++|..-++.-.-+.+ .||++--+.+... .-...++.++.+||.|+.+|+- |--.|..... ....+..-
T Consensus 22 ~~~v~gldaYv~gs~~~~~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~ 101 (242)
T KOG3043|consen 22 EEEVGGLDAYVVGSTSSKKVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPK 101 (242)
T ss_pred eEeecCeeEEEecCCCCCeEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCccc
Confidence 344555555444333333 6777777665544 4778889999999999999974 4212221110 01223333
Q ss_pred HHHHHHHHHHHh---C-cceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhh
Q 021184 79 VVGDLVGLLDEF---G-IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRF 154 (316)
Q Consensus 79 ~~~~~~~~~~~~---~-~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (316)
...++..+++.+ + .++|.++|+||||.++..+....| .+.+.+.+-|.....
T Consensus 102 ~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~----------------------- 157 (242)
T KOG3043|consen 102 IWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS----------------------- 157 (242)
T ss_pred chhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh-----------------------
Confidence 445555555544 4 568999999999999999999988 577777666533210
Q ss_pred cCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccC
Q 021184 155 QEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLD 234 (316)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (316)
++..
T Consensus 158 ------------------------------------------------------~D~~---------------------- 161 (242)
T KOG3043|consen 158 ------------------------------------------------------ADIA---------------------- 161 (242)
T ss_pred ------------------------------------------------------hHHh----------------------
Confidence 1111
Q ss_pred cchhccCCCCCccccccEEEEeeCCCcccCCCcchhhhhccCccccCC-CceEEEEEcCCCccccc-----cc------h
Q 021184 235 LNWELLAPWTGAQIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVP-GLQEVIVMEGVAHFINQ-----EK------A 302 (316)
Q Consensus 235 ~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~gH~~~~-----~~------~ 302 (316)
.+++|+|++.|+.|..+|+....++-+ .+.+... +. ++.++++-+|.... +. .
T Consensus 162 ------------~vk~Pilfl~ae~D~~~p~~~v~~~ee--~lk~~~~~~~-~v~~f~g~~HGf~~~r~~~~~Ped~~~~ 226 (242)
T KOG3043|consen 162 ------------NVKAPILFLFAELDEDVPPKDVKAWEE--KLKENPAVGS-QVKTFSGVGHGFVARRANISSPEDKKAA 226 (242)
T ss_pred ------------cCCCCEEEEeecccccCCHHHHHHHHH--HHhcCcccce-eEEEcCCccchhhhhccCCCChhHHHHH
Confidence 789999999999999999988877532 2322211 23 79999999997653 22 2
Q ss_pred HHHHHHHHHHHhhC
Q 021184 303 DEVSSHIYDFIKQF 316 (316)
Q Consensus 303 ~~~~~~i~~fl~~~ 316 (316)
|+..+.+.+|+++|
T Consensus 227 eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 227 EEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHh
Confidence 67778888888764
No 108
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.53 E-value=3.9e-14 Score=100.84 Aligned_cols=116 Identities=16% Similarity=0.230 Sum_probs=79.6
Q ss_pred eeCCeeEEEEecC---CCC-eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCC-CCCCCHHHHHH-HH
Q 021184 10 ATNGINMHVASIG---TGP-AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS-ITSYTALHVVG-DL 83 (316)
Q Consensus 10 ~~~g~~i~~~~~g---~~~-~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~-~~ 83 (316)
..||..+....+. +.+ .++.-.+.+.....|++++..++++||.|+++|+||.|.|+.... ...+.+.|++. |+
T Consensus 12 ~~DG~~l~~~~~pA~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~ 91 (281)
T COG4757 12 APDGYSLPGQRFPADGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDF 91 (281)
T ss_pred cCCCccCccccccCCCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcch
Confidence 3477777655553 334 455555556666788999999999999999999999999987552 13456666664 66
Q ss_pred HHHHHHh----CcceEEEEEechhHHHHHHHHHhCccccceeeeeccc
Q 021184 84 VGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127 (316)
Q Consensus 84 ~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
...++.+ ...+.+.||||+||.+.-.+ .++| +..+....+..
T Consensus 92 ~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~-~~~~-k~~a~~vfG~g 137 (281)
T COG4757 92 PAALAALKKALPGHPLYFVGHSFGGQALGLL-GQHP-KYAAFAVFGSG 137 (281)
T ss_pred HHHHHHHHhhCCCCceEEeeccccceeeccc-ccCc-ccceeeEeccc
Confidence 6666655 34589999999999765544 3444 45555444443
No 109
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.52 E-value=3.5e-13 Score=103.39 Aligned_cols=107 Identities=21% Similarity=0.298 Sum_probs=89.9
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhC---CceEEecCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhC-----
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSR---GYRAIAPDLRGYGDTDAP----PSITSYTALHVVGDLVGLLDEFG----- 91 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~~~~~~~~----- 91 (316)
.+.++|++|.+|-.+.|..+.+.|.+. .+.|++..+.||-.++.. .....+++++.++...++++..-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 357999999999999999998888743 699999999999887665 13467899999988887777652
Q ss_pred -cceEEEEEechhHHHHHHHHHhCc---cccceeeeecccccC
Q 021184 92 -IEQVFLVGHDWGALIAWYFCLLRP---DRVKALVNLSVVFRS 130 (316)
Q Consensus 92 -~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~il~~~~~~~ 130 (316)
..+++++|||.|++++++.+.+.+ .+|.+++++-|....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 247999999999999999999999 689999999987653
No 110
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.52 E-value=5.4e-13 Score=96.00 Aligned_cols=117 Identities=20% Similarity=0.240 Sum_probs=75.1
Q ss_pred EEee-CCeeEEEEecCC-------CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC-CCCCCCCCCCCCCHHH
Q 021184 8 TVAT-NGINMHVASIGT-------GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY-GDTDAPPSITSYTALH 78 (316)
Q Consensus 8 ~~~~-~g~~i~~~~~g~-------~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~ 78 (316)
.+.+ +|.+|+.++.-+ .++||+.+|++.....+..++..|+..||+|+.+|.-.| |.|++.. ..+++..
T Consensus 6 vi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I--~eftms~ 83 (294)
T PF02273_consen 6 VIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI--NEFTMSI 83 (294)
T ss_dssp EEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B---------------HHH
T ss_pred eeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh--hhcchHH
Confidence 3444 789999887643 479999999999999999999999999999999998877 8898877 6888888
Q ss_pred HHHHHHHHHHHh---CcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 79 VVGDLVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 79 ~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
..+++..+++.+ |..++.++.-|+.|-+|+..|++- .+.-+|...+..
T Consensus 84 g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~i--~lsfLitaVGVV 134 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAADI--NLSFLITAVGVV 134 (294)
T ss_dssp HHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTTS----SEEEEES--S
T ss_pred hHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhcc--CcceEEEEeeee
Confidence 888888777765 777899999999999999999954 366666655544
No 111
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.51 E-value=1.8e-13 Score=102.69 Aligned_cols=99 Identities=21% Similarity=0.203 Sum_probs=65.7
Q ss_pred EEEEccCCC---ChhhHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCcceEEE
Q 021184 27 VLFLHGFPE---LWYSWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE-----FGIEQVFL 97 (316)
Q Consensus 27 vv~~hG~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l 97 (316)
||++||.+. +......++..+++ .|+.|+++|+|=..... ....++|..+.+..+++. .+.+++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~-----~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP-----FPAALEDVKAAYRWLLKNADKLGIDPERIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS-----TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc-----ccccccccccceeeeccccccccccccceEE
Confidence 799999873 44455666777765 79999999999432211 222445555555555555 34568999
Q ss_pred EEechhHHHHHHHHHhCcc----ccceeeeecccccC
Q 021184 98 VGHDWGALIAWYFCLLRPD----RVKALVNLSVVFRS 130 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~~ 130 (316)
+|+|.||.+++.++....+ .++++++++|....
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999986544 38999999996543
No 112
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.49 E-value=1.8e-12 Score=91.06 Aligned_cols=97 Identities=22% Similarity=0.233 Sum_probs=77.9
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceEEEEEec
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQVFLVGHD 101 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S 101 (316)
.+||+-|=++-...=..+++.|+++|+.|+.+|-+-|=.+ ..+.++.+.|+.+++++. +.++++|+|+|
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~-------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS-------ERTPEQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh-------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 5788888777766667789999999999999997655444 336788888888888765 66799999999
Q ss_pred hhHHHHHHHHHhCcc----ccceeeeeccccc
Q 021184 102 WGALIAWYFCLLRPD----RVKALVNLSVVFR 129 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~----~v~~~il~~~~~~ 129 (316)
+|+-+.-....+-|. +|..++++++...
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 999888877777764 6999999998653
No 113
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.48 E-value=4.5e-13 Score=107.60 Aligned_cols=107 Identities=23% Similarity=0.256 Sum_probs=61.8
Q ss_pred CCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC-CCCCCC-CC--------------------CCCC-----
Q 021184 22 GTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY-GDTDAP-PS--------------------ITSY----- 74 (316)
Q Consensus 22 g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~-~~--------------------~~~~----- 74 (316)
++-|+|||-||++++...|..++..|+.+||-|+++|+|.. +-.... .+ ....
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 34589999999999999999999999999999999999943 110000 00 0000
Q ss_pred ------CHHHHHHHHHHHHHHh--------------------------CcceEEEEEechhHHHHHHHHHhCccccceee
Q 021184 75 ------TALHVVGDLVGLLDEF--------------------------GIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 122 (316)
Q Consensus 75 ------~~~~~~~~~~~~~~~~--------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~i 122 (316)
.++.-+.++..+++.+ +..++.++|||+||..++..+.+. .++++.|
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I 256 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGI 256 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEE
Confidence 0011223333333222 234799999999999999988887 5799999
Q ss_pred eeccccc
Q 021184 123 NLSVVFR 129 (316)
Q Consensus 123 l~~~~~~ 129 (316)
++++...
T Consensus 257 ~LD~W~~ 263 (379)
T PF03403_consen 257 LLDPWMF 263 (379)
T ss_dssp EES---T
T ss_pred EeCCccc
Confidence 9998653
No 114
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.47 E-value=6.1e-12 Score=103.98 Aligned_cols=117 Identities=17% Similarity=0.144 Sum_probs=82.8
Q ss_pred CeeEEEEecC------CCCeEEEEccCCCChhhHHHHHH------------------HHhhCCceEEecCCC-CCCCCCC
Q 021184 13 GINMHVASIG------TGPAVLFLHGFPELWYSWRKQLL------------------YLSSRGYRAIAPDLR-GYGDTDA 67 (316)
Q Consensus 13 g~~i~~~~~g------~~~~vv~~hG~~~~~~~~~~~~~------------------~l~~~g~~v~~~d~~-G~G~s~~ 67 (316)
+..++|+-.. +.|+||+++|.+|.+..+-.+.+ .+.+. ..++.+|.| |+|.|..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccC
Confidence 4667766543 26899999999988765533221 12233 678999975 9999876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-------CcceEEEEEechhHHHHHHHHHhCc----------cccceeeeecccccC
Q 021184 68 PPSITSYTALHVVGDLVGLLDEF-------GIEQVFLVGHDWGALIAWYFCLLRP----------DRVKALVNLSVVFRS 130 (316)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p----------~~v~~~il~~~~~~~ 130 (316)
.......+.++.++|+.+++... +..+++|+|||+||..+..+|.+-- =.++|+++-++...+
T Consensus 139 ~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 139 DKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 54323456688889998888743 4468999999999999988887621 147899888887654
No 115
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.46 E-value=1.8e-12 Score=94.48 Aligned_cols=107 Identities=27% Similarity=0.366 Sum_probs=76.6
Q ss_pred cCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHh-------Cc
Q 021184 21 IGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITS-YTALHVVGDLVGLLDEF-------GI 92 (316)
Q Consensus 21 ~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~ 92 (316)
.|.-|+|+|+||+......|..+..+++.+||-|+++++-..-. +....+ .+....++.+..-+.++ +.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl 119 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLPENVEANL 119 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCCCCccccc
Confidence 35568999999999999999999999999999999999864211 110001 12222333333333332 34
Q ss_pred ceEEEEEechhHHHHHHHHHhCc--cccceeeeecccccC
Q 021184 93 EQVFLVGHDWGALIAWYFCLLRP--DRVKALVNLSVVFRS 130 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~il~~~~~~~ 130 (316)
.++.++|||.||..|..+|..+. -++.++|.++|....
T Consensus 120 ~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGT 159 (307)
T ss_pred ceEEEeecCCccHHHHHHHhcccccCchhheecccccCCC
Confidence 58999999999999999999774 258899999987644
No 116
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.46 E-value=3.7e-12 Score=111.23 Aligned_cols=84 Identities=11% Similarity=0.174 Sum_probs=65.1
Q ss_pred HHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------cceEEEEEec
Q 021184 42 KQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG--------------------IEQVFLVGHD 101 (316)
Q Consensus 42 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~G~S 101 (316)
.+.+.|+++||.|+..|.||.|.|++... ... .+-.+|..++++.+. ..+|.++|.|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~--~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~S 346 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT--TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKS 346 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc--cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEc
Confidence 34577889999999999999999988653 222 234445555555443 3589999999
Q ss_pred hhHHHHHHHHHhCccccceeeeecccc
Q 021184 102 WGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
+||.+++.+|+..|..++++|..++..
T Consensus 347 Y~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 347 YLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 999999999999888999999887654
No 117
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.44 E-value=1e-11 Score=117.31 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=88.3
Q ss_pred cCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc-ceEEEEE
Q 021184 21 IGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI-EQVFLVG 99 (316)
Q Consensus 21 ~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G 99 (316)
.+++++++++||++++...|..+++.|... +.|+.++.+|+|.+.. ..++++++++++.+.++.+.. .+++++|
T Consensus 1065 ~~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~~----~~~~l~~la~~~~~~i~~~~~~~p~~l~G 1139 (1296)
T PRK10252 1065 EGDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPMQ----TATSLDEVCEAHLATLLEQQPHGPYHLLG 1139 (1296)
T ss_pred cCCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 355789999999999999999999999775 9999999999986532 357999999999999987654 4899999
Q ss_pred echhHHHHHHHHHh---Cccccceeeeecccc
Q 021184 100 HDWGALIAWYFCLL---RPDRVKALVNLSVVF 128 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~---~p~~v~~~il~~~~~ 128 (316)
||+||.++..+|.+ .++++..++++++..
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred echhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 99999999999986 577899999988743
No 118
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.43 E-value=6.8e-12 Score=86.02 Aligned_cols=91 Identities=15% Similarity=0.090 Sum_probs=66.7
Q ss_pred CeEEEEccCCCChh-hHHHHHH-HHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEech
Q 021184 25 PAVLFLHGFPELWY-SWRKQLL-YLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 25 ~~vv~~hG~~~~~~-~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
+.+|++||+.+|.. .|+..-+ .|.. +-.+++. +. ..-..+++++.+.+.++.. .++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w----~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DW----EAPVLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CC----CCCCHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 57899999988764 5654332 2221 2222222 11 2347899999999999887 35799999999
Q ss_pred hHHHHHHHHHhCccccceeeeeccccc
Q 021184 103 GALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
|+..++.++......|+|+++++|+-.
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~ 95 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDV 95 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCc
Confidence 999999999987778999999998653
No 119
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.42 E-value=4.7e-11 Score=92.11 Aligned_cols=241 Identities=16% Similarity=0.133 Sum_probs=131.4
Q ss_pred CCeEEEEccCCCChhhHH-HH-HHHHhhCCceEEecCCCCCCCCCCCCCC--CCCCHHHH----------HHHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYSWR-KQ-LLYLSSRGYRAIAPDLRGYGDTDAPPSI--TSYTALHV----------VGDLVGLLDE 89 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~-~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~----------~~~~~~~~~~ 89 (316)
+|.+|.++|.|.+....+ .+ +..|.++|+..+.+..|-||...+.... .-.+..|+ +..+...++.
T Consensus 92 rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~ 171 (348)
T PF09752_consen 92 RPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLER 171 (348)
T ss_pred CceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHh
Confidence 678888999888554332 23 7788888999999999999987654311 11122221 1233334444
Q ss_pred hCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchh-hhhhhccchhhhhhhcCCCchhhhhhhhh
Q 021184 90 FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVD-QYRALFGDDFYICRFQEPGVAEEDFAQID 168 (316)
Q Consensus 90 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (316)
.|..++.+.|.||||.+|...|+.+|..+..+-.+++.... .. ..+ .+....+.......+ ..
T Consensus 172 ~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs-~v---Ft~Gvls~~i~W~~L~~q~----------~~-- 235 (348)
T PF09752_consen 172 EGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS-VV---FTEGVLSNSINWDALEKQF----------ED-- 235 (348)
T ss_pred cCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC-cc---hhhhhhhcCCCHHHHHHHh----------cc--
Confidence 58889999999999999999999999866655555543221 00 000 011111100000000 00
Q ss_pred HHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCccc
Q 021184 169 TARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQI 248 (316)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 248 (316)
......... .......... ..........+.+......+.. .........+ .-
T Consensus 236 --~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~Ea~~~m~~~md~------------~T~l~nf~~P----~d 288 (348)
T PF09752_consen 236 --TVYEEEISD-------IPAQNKSLPL--DSMEERRRDREALRFMRGVMDS------------FTHLTNFPVP----VD 288 (348)
T ss_pred --cchhhhhcc-------cccCcccccc--hhhccccchHHHHHHHHHHHHh------------hccccccCCC----CC
Confidence 000000000 0000000000 0001111112222222221111 0000111111 22
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccc-cccchHHHHHHHHHHHhh
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFI-NQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~ 315 (316)
.-.+.++.+++|.++|...+.. +.+..|++ ++..+++ ||.. ++-+.+.|.+.|.+=+++
T Consensus 289 p~~ii~V~A~~DaYVPr~~v~~------Lq~~WPGs-EvR~l~g-GHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 289 PSAIIFVAAKNDAYVPRHGVLS------LQEIWPGS-EVRYLPG-GHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred CCcEEEEEecCceEechhhcch------HHHhCCCC-eEEEecC-CcEEEeeechHHHHHHHHHHhhC
Confidence 4458899999999999887765 78999999 9999987 9987 777889999999887653
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.42 E-value=3e-12 Score=99.58 Aligned_cols=117 Identities=19% Similarity=0.227 Sum_probs=77.1
Q ss_pred CCeeEEEEec-----CC--CCeEEEEccCCCChhh-HHHH---------HHHHhhCCceEEecCCCCCCCCCCCCCCCCC
Q 021184 12 NGINMHVASI-----GT--GPAVLFLHGFPELWYS-WRKQ---------LLYLSSRGYRAIAPDLRGYGDTDAPPSITSY 74 (316)
Q Consensus 12 ~g~~i~~~~~-----g~--~~~vv~~hG~~~~~~~-~~~~---------~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 74 (316)
||++|..... +. -|+||..|+++.+... .... ...++++||.|+..|.||.|.|.+.....
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~-- 78 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM-- 78 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--
Confidence 5666653322 22 4789999999865421 1111 12388999999999999999999876421
Q ss_pred CHHHHHHHHHHHHHHh---Cc--ceEEEEEechhHHHHHHHHHhCccccceeeeecccccCC
Q 021184 75 TALHVVGDLVGLLDEF---GI--EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSR 131 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~---~~--~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 131 (316)
...-++|..++++-+ .. .+|.++|.|.+|..++.+|+..|..+++++...+.....
T Consensus 79 -~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 79 -SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp -SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTC
T ss_pred -ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCccc
Confidence 444555666666554 21 389999999999999999998888999999988866543
No 121
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.40 E-value=1.9e-11 Score=87.09 Aligned_cols=59 Identities=17% Similarity=0.326 Sum_probs=46.3
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
.+++|.|-|.|+.|.++|.+.+.. |.+..++. .+..-+| ||.++-.. .+.+.|.+||.+
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~------L~~~~~~a-~vl~Hpg-gH~VP~~~--~~~~~i~~fi~~ 219 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQ------LAESFKDA-TVLEHPG-GHIVPNKA--KYKEKIADFIQS 219 (230)
T ss_pred CCCCCeeEEecccceeecchHHHH------HHHhcCCC-eEEecCC-CccCCCch--HHHHHHHHHHHH
Confidence 789999999999999999998877 66888888 6666665 99987544 455566666543
No 122
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.40 E-value=1.9e-11 Score=106.49 Aligned_cols=222 Identities=17% Similarity=0.231 Sum_probs=141.4
Q ss_pred ccceEEeeCCeeEEEEecCC--------CCeEEEEccCCCChh-------hHHHHHHHHhhCCceEEecCCCCCCCCCCC
Q 021184 4 IKHTTVATNGINMHVASIGT--------GPAVLFLHGFPELWY-------SWRKQLLYLSSRGYRAIAPDLRGYGDTDAP 68 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g~--------~~~vv~~hG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~ 68 (316)
++...+..+|....+...-+ -|.|+.+||.+++.. .|.. ......|+.|+.+|.||.|.....
T Consensus 498 ~~~~~i~~~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~--~~~s~~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 498 VEFGKIEIDGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNE--VVVSSRGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ceeEEEEeccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHH--HhhccCCeEEEEEcCCCcCCcchh
Confidence 34455666898888776432 478999999987332 2322 246677999999999998776432
Q ss_pred C------CCCCCCHHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhCccc-cceeeeecccccCCCCCCCchh
Q 021184 69 P------SITSYTALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLRPDR-VKALVNLSVVFRSRNPATKPVD 139 (316)
Q Consensus 69 ~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~ 139 (316)
. ........|+...+..+++.. +.+++.++|+|.||.+++..+...|+. +++.+.++|+...........+
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~te 655 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTE 655 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccH
Confidence 1 123346677777777766654 556899999999999999999999855 4555999997754221000000
Q ss_pred hhhhhccchhhhhhhcCCCchhhhhhhhhHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhc
Q 021184 140 QYRALFGDDFYICRFQEPGVAEEDFAQIDTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFS 219 (316)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (316)
+. +.. .......+.+.
T Consensus 656 ry-----------------------------------mg~---------------------------p~~~~~~y~e~-- 671 (755)
T KOG2100|consen 656 RY-----------------------------------MGL---------------------------PSENDKGYEES-- 671 (755)
T ss_pred hh-----------------------------------cCC---------------------------Cccccchhhhc--
Confidence 00 000 00000001110
Q ss_pred ccccccccceeeccCcchhccCCCCCccccccE-EEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCcccc
Q 021184 220 QKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPV-KFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFIN 298 (316)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv-l~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~ 298 (316)
...... ..++.|. |++||+.|..++.+.+.++++ .|..+.-.. ++.++|+.+|...
T Consensus 672 --------------~~~~~~------~~~~~~~~LliHGt~DdnVh~q~s~~~~~--aL~~~gv~~-~~~vypde~H~is 728 (755)
T KOG2100|consen 672 --------------SVSSPA------NNIKTPKLLLIHGTEDDNVHFQQSAILIK--ALQNAGVPF-RLLVYPDENHGIS 728 (755)
T ss_pred --------------cccchh------hhhccCCEEEEEcCCcCCcCHHHHHHHHH--HHHHCCCce-EEEEeCCCCcccc
Confidence 000000 1556665 999999999999887777663 355544346 9999999999986
Q ss_pred ccc-hHHHHHHHHHHHh
Q 021184 299 QEK-ADEVSSHIYDFIK 314 (316)
Q Consensus 299 ~~~-~~~~~~~i~~fl~ 314 (316)
... -..+...+..|++
T Consensus 729 ~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 729 YVEVISHLYEKLDRFLR 745 (755)
T ss_pred cccchHHHHHHHHHHHH
Confidence 543 3567778888876
No 123
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.39 E-value=2.9e-12 Score=96.50 Aligned_cols=107 Identities=20% Similarity=0.288 Sum_probs=70.9
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHh-hCCc--e--EEecCCCCC----CCCC---CCC------CCCC-CCHHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLS-SRGY--R--AIAPDLRGY----GDTD---APP------SITS-YTALHVVGDLV 84 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~-~~g~--~--v~~~d~~G~----G~s~---~~~------~~~~-~~~~~~~~~~~ 84 (316)
..|.||+||++++...+..++..+. +.|. . ++.++.-|. |.=. ..+ .... -+....+..+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4589999999999999999999997 6553 2 333333332 2211 111 0012 36777888888
Q ss_pred HHHHHh----CcceEEEEEechhHHHHHHHHHhCcc-----ccceeeeecccccC
Q 021184 85 GLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPD-----RVKALVNLSVVFRS 130 (316)
Q Consensus 85 ~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~~~ 130 (316)
.++.++ +++++.+|||||||..++.++..+.. ++..+|.+++++..
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 887776 67799999999999999999988532 58999999998765
No 124
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.38 E-value=6.6e-11 Score=92.52 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=78.3
Q ss_pred CCeEEEEccCCC-----ChhhHHHHHHHHh-hCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------hC
Q 021184 24 GPAVLFLHGFPE-----LWYSWRKQLLYLS-SRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE------FG 91 (316)
Q Consensus 24 ~~~vv~~hG~~~-----~~~~~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~------~~ 91 (316)
.|.||++||.|. +...|..+...++ +.+..|+++|+|=--+.. ....++|..+.+..+.++ .+
T Consensus 90 ~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~-----~Pa~y~D~~~Al~w~~~~~~~~~~~D 164 (336)
T KOG1515|consen 90 LPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHP-----FPAAYDDGWAALKWVLKNSWLKLGAD 164 (336)
T ss_pred ceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCC-----CCccchHHHHHHHHHHHhHHHHhCCC
Confidence 579999999873 3456778887774 448899999998433322 344677777777777764 35
Q ss_pred cceEEEEEechhHHHHHHHHHhC------ccccceeeeecccccCCCC
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLR------PDRVKALVNLSVVFRSRNP 133 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~------p~~v~~~il~~~~~~~~~~ 133 (316)
.++++|+|-|-||.+|..+|.+. +-++++.|++-|.......
T Consensus 165 ~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~ 212 (336)
T KOG1515|consen 165 PSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDR 212 (336)
T ss_pred cccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCC
Confidence 66899999999999998887753 3479999999998876443
No 125
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.36 E-value=1.9e-12 Score=96.13 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=31.9
Q ss_pred cceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.++|.|+|.|.||-+|+.+|+.+| .|+++|.++|....
T Consensus 21 ~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 21 PDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred CCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 358999999999999999999999 79999999987654
No 126
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.35 E-value=1e-11 Score=92.68 Aligned_cols=103 Identities=24% Similarity=0.294 Sum_probs=71.4
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhh--------CCceEEecCCCCCCCCCCCCCCCCCCHHH----HHHHHHHHHHHh
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSS--------RGYRAIAPDLRGYGDTDAPPSITSYTALH----VVGDLVGLLDEF 90 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~----~~~~~~~~~~~~ 90 (316)
.+.+|||+||.+++...++.+...+.+ ..++++++|+......-. ...+.+ ..+.+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~-----g~~l~~q~~~~~~~i~~i~~~~ 77 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH-----GRTLQRQAEFLAEAIKYILELY 77 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc-----cccHHHHHHHHHHHHHHHHHhh
Confidence 477999999999998888777765522 247899999876432211 122333 333444444444
Q ss_pred -----CcceEEEEEechhHHHHHHHHHhCc---cccceeeeecccccC
Q 021184 91 -----GIEQVFLVGHDWGALIAWYFCLLRP---DRVKALVNLSVVFRS 130 (316)
Q Consensus 91 -----~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~~il~~~~~~~ 130 (316)
+.+++++|||||||.+|..++...+ +.|+.+|.++++-..
T Consensus 78 ~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 78 KSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred hhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 4568999999999999998887643 479999999986543
No 127
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.35 E-value=6.3e-12 Score=97.12 Aligned_cols=93 Identities=25% Similarity=0.250 Sum_probs=68.0
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC--CCCCCCCCC----CCCCHHHHHHHHHHHHHHh-------
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY--GDTDAPPSI----TSYTALHVVGDLVGLLDEF------- 90 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~----~~~~~~~~~~~~~~~~~~~------- 90 (316)
-|.|++-||.+.+...+..+++++++.||.|..+|++|. |........ ...-+.+...|+..+++.+
T Consensus 71 ~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP 150 (365)
T COG4188 71 LPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASP 150 (365)
T ss_pred CCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCc
Confidence 589999999999999999999999999999999999994 333222111 1112233444555444433
Q ss_pred ------CcceEEEEEechhHHHHHHHHHhCcc
Q 021184 91 ------GIEQVFLVGHDWGALIAWYFCLLRPD 116 (316)
Q Consensus 91 ------~~~~~~l~G~S~Gg~~a~~~a~~~p~ 116 (316)
+..+|.++|||+||+.++..+....+
T Consensus 151 ~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 151 ALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred ccccccCccceEEEecccccHHHHHhcccccc
Confidence 34589999999999999999876654
No 128
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.35 E-value=1e-10 Score=87.81 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=86.4
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc-eEEEEEechh
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE-QVFLVGHDWG 103 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S~G 103 (316)
|+|.++|+.+|...+|..+...|... ..|+..+.||+|.-.. ..-+++++++...+.+..+..+ +++++|||+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~----~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ----PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc----ccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 68999999999999999999999998 9999999999986332 3458999999988888887554 8999999999
Q ss_pred HHHHHHHHHhC---ccccceeeeeccccc
Q 021184 104 ALIAWYFCLLR---PDRVKALVNLSVVFR 129 (316)
Q Consensus 104 g~~a~~~a~~~---p~~v~~~il~~~~~~ 129 (316)
|.+|+..|.+- .+.|..++++++...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999999863 346999999998776
No 129
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.34 E-value=3.7e-12 Score=94.82 Aligned_cols=105 Identities=21% Similarity=0.128 Sum_probs=53.4
Q ss_pred CCCeEEEEccCCCChhhHHHHH----HHHhhCCceEEecCCCCCC-----CCCC------------C------C---CCC
Q 021184 23 TGPAVLFLHGFPELWYSWRKQL----LYLSSRGYRAIAPDLRGYG-----DTDA------------P------P---SIT 72 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~----~~l~~~g~~v~~~d~~G~G-----~s~~------------~------~---~~~ 72 (316)
.++.||++||++.++..+.... +.|.+.++..+.+|-|--- -... + . ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3678999999999999886554 4555525888888754211 1100 0 0 001
Q ss_pred CCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCc--------cccceeeeecccc
Q 021184 73 SYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP--------DRVKALVNLSVVF 128 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p--------~~v~~~il~~~~~ 128 (316)
...+++..+.+.+.++..+. =..|+|+|+||.+|..++.... -.++-+|++++..
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp G---HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccCHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 22345556666666666552 2479999999999998886432 1367788887754
No 130
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.32 E-value=2.6e-11 Score=99.00 Aligned_cols=209 Identities=19% Similarity=0.203 Sum_probs=134.9
Q ss_pred CCeEEEEccCCCChh---hHH--HH--HHHHhhCCceEEecCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHh
Q 021184 24 GPAVLFLHGFPELWY---SWR--KQ--LLYLSSRGYRAIAPDLRGYGDTDAPP------SITSYTALHVVGDLVGLLDEF 90 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~---~~~--~~--~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~~~~~~ 90 (316)
-|+++++-|.++-.. .|. .. ...|+..||.|+.+|-||.-...... ......++|.++.+.-+.++.
T Consensus 642 Yptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~ 721 (867)
T KOG2281|consen 642 YPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQT 721 (867)
T ss_pred CceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhc
Confidence 489999999986432 222 11 35788899999999999975543221 224557888888888888876
Q ss_pred ---CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhhhccchhhhhhhcCCCchhhhhhhh
Q 021184 91 ---GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAQI 167 (316)
Q Consensus 91 ---~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (316)
+.+++.+-|||.||++++....++|+.++..|.-+|+..-........+++. ..|...+..
T Consensus 722 gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTERYM------------g~P~~nE~g---- 785 (867)
T KOG2281|consen 722 GFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTERYM------------GYPDNNEHG---- 785 (867)
T ss_pred CcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchhhhc------------CCCccchhc----
Confidence 4568999999999999999999999988877766654421110000000000 000000000
Q ss_pred hHHHHHHHHhcCCCCCCCCCCccccccCCCCCCCCCCCCChHHHHHHHHhhcccccccccceeeccCcchhccCCCCCcc
Q 021184 168 DTARLIKKFLGGRSPKPPCVPKEIGFRGLPDLRTLPSWLSEEDVNYYASKFSQKGFTGGLNYYRCLDLNWELLAPWTGAQ 247 (316)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (316)
.....+......+ + .
T Consensus 786 --------------------------------------Y~agSV~~~Vekl-----------------------p----d 800 (867)
T KOG2281|consen 786 --------------------------------------YGAGSVAGHVEKL-----------------------P----D 800 (867)
T ss_pred --------------------------------------ccchhHHHHHhhC-----------------------C----C
Confidence 0001111111110 0 2
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccc-cccchHHHHHHHHHHHhhC
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFI-NQEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~~ 316 (316)
=....|++||--|.-|.......++. .+.++.+.- ++.+||+..|.+ ..|...-+-..+..||+++
T Consensus 801 epnRLlLvHGliDENVHF~Hts~Lvs--~lvkagKpy-eL~IfP~ERHsiR~~es~~~yE~rll~FlQ~~ 867 (867)
T KOG2281|consen 801 EPNRLLLVHGLIDENVHFAHTSRLVS--ALVKAGKPY-ELQIFPNERHSIRNPESGIYYEARLLHFLQEN 867 (867)
T ss_pred CCceEEEEecccccchhhhhHHHHHH--HHHhCCCce-EEEEccccccccCCCccchhHHHHHHHHHhhC
Confidence 24458999999999888877666553 355666667 999999999998 5566677788899999864
No 131
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.31 E-value=5.2e-10 Score=89.06 Aligned_cols=103 Identities=17% Similarity=0.118 Sum_probs=73.2
Q ss_pred CCeEEEEccCC---CChhhH-HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----Ccce
Q 021184 24 GPAVLFLHGFP---ELWYSW-RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF-----GIEQ 94 (316)
Q Consensus 24 ~~~vv~~hG~~---~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 94 (316)
.|+||++||.+ ++.... ..+...+...|+.|+++|+|-.-+-. ....+++..+.+..+.++. +.++
T Consensus 79 ~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~-----~p~~~~d~~~a~~~l~~~~~~~g~dp~~ 153 (312)
T COG0657 79 APVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHP-----FPAALEDAYAAYRWLRANAAELGIDPSR 153 (312)
T ss_pred CcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCC-----CCchHHHHHHHHHHHHhhhHhhCCCccc
Confidence 68999999987 344445 34445556679999999998543332 2335666655565555543 3568
Q ss_pred EEEEEechhHHHHHHHHHhCcc----ccceeeeecccccCC
Q 021184 95 VFLVGHDWGALIAWYFCLLRPD----RVKALVNLSVVFRSR 131 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~~~ 131 (316)
|.++|+|-||.+++.++..-.+ ...+.+++.|.....
T Consensus 154 i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 154 IAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred eEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 9999999999999998886543 468888888876553
No 132
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.30 E-value=2.2e-11 Score=99.10 Aligned_cols=124 Identities=19% Similarity=0.230 Sum_probs=84.2
Q ss_pred ceEEee-CCeeEEEEe--cCCCCeEEEEccC---CCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHH
Q 021184 6 HTTVAT-NGINMHVAS--IGTGPAVLFLHGF---PELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHV 79 (316)
Q Consensus 6 ~~~~~~-~g~~i~~~~--~g~~~~vv~~hG~---~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~ 79 (316)
..+.+. +|+.+.+.. .|....-.+-+.. ......|..+++.|.+.||.+ ..|++|+|.+.+.........+++
T Consensus 70 ~~~~~~~~gv~i~vp~~~~g~~~i~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~L 148 (440)
T PLN02733 70 GKTVSLDPKTEIVVPDDRYGLYAIDILDPDVIIRLDEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGL 148 (440)
T ss_pred CceecCCCCceEEcCCCCCCceeeEEecCccccCcchHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHH
Confidence 344556 588887764 2322211112211 345678999999999999766 899999999876542111223444
Q ss_pred HHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccc----cceeeeecccccC
Q 021184 80 VGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDR----VKALVNLSVVFRS 130 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~----v~~~il~~~~~~~ 130 (316)
.+.+.++.+..+.++++++||||||.+++.++..+|+. |+++|.++++...
T Consensus 149 k~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 149 KKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred HHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 44444455555778999999999999999999988863 7889999887544
No 133
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.29 E-value=1.3e-10 Score=85.64 Aligned_cols=107 Identities=16% Similarity=0.175 Sum_probs=69.8
Q ss_pred CCeEEEEccCCCChhhHHHH--HHHHhh-CCceEEecCCCCCCCCC--C----CCCC-CCCCHHHHHHHHHHHHHHh--C
Q 021184 24 GPAVLFLHGFPELWYSWRKQ--LLYLSS-RGYRAIAPDLRGYGDTD--A----PPSI-TSYTALHVVGDLVGLLDEF--G 91 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~--~~~l~~-~g~~v~~~d~~G~G~s~--~----~~~~-~~~~~~~~~~~~~~~~~~~--~ 91 (316)
.|.||++||.+.+...+... ...|++ +||-|+.++........ . .... ..-+...+...+..+.... +
T Consensus 16 ~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD 95 (220)
T PF10503_consen 16 VPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNID 95 (220)
T ss_pred CCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccC
Confidence 58999999999998876542 234544 58999999854211110 0 0000 0112222333333444444 4
Q ss_pred cceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
..+|++.|+|.||+++..++..+|+.+.++..+++....
T Consensus 96 ~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 96 PSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYG 134 (220)
T ss_pred CCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccc
Confidence 458999999999999999999999999999888876543
No 134
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.26 E-value=1.1e-10 Score=81.97 Aligned_cols=110 Identities=19% Similarity=0.151 Sum_probs=67.6
Q ss_pred eEEEEecCC---CCeEEEEccCC----CChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021184 15 NMHVASIGT---GPAVLFLHGFP----ELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLL 87 (316)
Q Consensus 15 ~i~~~~~g~---~~~vv~~hG~~----~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 87 (316)
+-.+..+|+ .|..||+||.- ..+.+. ..+..+.+.||+|.++++ +.+..... -..++.+...-+.-++
T Consensus 55 ~q~VDIwg~~~~~klfIfIHGGYW~~g~rk~cl-siv~~a~~~gY~vasvgY---~l~~q~ht-L~qt~~~~~~gv~fil 129 (270)
T KOG4627|consen 55 RQLVDIWGSTNQAKLFIFIHGGYWQEGDRKMCL-SIVGPAVRRGYRVASVGY---NLCPQVHT-LEQTMTQFTHGVNFIL 129 (270)
T ss_pred ceEEEEecCCCCccEEEEEecchhhcCchhccc-chhhhhhhcCeEEEEecc---CcCccccc-HHHHHHHHHHHHHHHH
Confidence 334455553 68999999963 222233 234455567999999864 44432210 1123344444444445
Q ss_pred HHhCc-ceEEEEEechhHHHHHHHHHh-Cccccceeeeeccccc
Q 021184 88 DEFGI-EQVFLVGHDWGALIAWYFCLL-RPDRVKALVNLSVVFR 129 (316)
Q Consensus 88 ~~~~~-~~~~l~G~S~Gg~~a~~~a~~-~p~~v~~~il~~~~~~ 129 (316)
+.... +.+.+-|||-|+++|+.+..+ +.-+|.|+++.++.+.
T Consensus 130 k~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~ 173 (270)
T KOG4627|consen 130 KYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD 173 (270)
T ss_pred HhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh
Confidence 55433 456777899999999987775 3348999999998764
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.24 E-value=1.8e-10 Score=81.60 Aligned_cols=103 Identities=21% Similarity=0.323 Sum_probs=72.5
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCC-----------------CCCCCCCCCHHHHHHHHHHHH
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD-----------------APPSITSYTALHVVGDLVGLL 87 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-----------------~~~~~~~~~~~~~~~~~~~~~ 87 (316)
.+||++||.+.+...|..+++.|.-.....+++..|-.-.+. .-.+ ........++.+..++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~-d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPE-DEEGLHRAADNIANLI 82 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccch-hhhHHHHHHHHHHHHH
Confidence 479999999999999988888876666677777543221110 0000 2234555666677777
Q ss_pred HHh---C--cceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 88 DEF---G--IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 88 ~~~---~--~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
++. + ..+|.+-|.|+||.+++..+..+|..+.+++...+..
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~ 128 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFL 128 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeecccccc
Confidence 654 3 3478999999999999999999988888877666643
No 136
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.23 E-value=1.5e-11 Score=95.81 Aligned_cols=102 Identities=28% Similarity=0.400 Sum_probs=61.5
Q ss_pred CCeEEEEccCCCChhh--------------H----HHHHHHHhhCCceEEecCCCCCCCCCCCCCCC---CCCHHHHH--
Q 021184 24 GPAVLFLHGFPELWYS--------------W----RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSIT---SYTALHVV-- 80 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~---~~~~~~~~-- 80 (316)
.|.||++||-++..+. + ..+...|+++||.|+++|.+|+|+........ .++.+.++
T Consensus 115 ~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~ 194 (390)
T PF12715_consen 115 FPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARN 194 (390)
T ss_dssp EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHH
T ss_pred CCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHH
Confidence 4799999997655432 1 23577899999999999999999976543211 11212221
Q ss_pred -------------HHHHHHHHHh------CcceEEEEEechhHHHHHHHHHhCccccceeeeecc
Q 021184 81 -------------GDLVGLLDEF------GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 81 -------------~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
-|....++.+ +.++|.++|+||||..++.+|+..+ +|++.|..+-
T Consensus 195 ~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALDd-RIka~v~~~~ 258 (390)
T PF12715_consen 195 LLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALDD-RIKATVANGY 258 (390)
T ss_dssp HHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH-T-T--EEEEES-
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcch-hhHhHhhhhh
Confidence 1222344443 4568999999999999999999985 7888876664
No 137
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.21 E-value=1.3e-09 Score=87.71 Aligned_cols=210 Identities=14% Similarity=0.095 Sum_probs=112.8
Q ss_pred HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CcceEEEEEechhHHHHHHHHHhCcccc
Q 021184 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF-----GIEQVFLVGHDWGALIAWYFCLLRPDRV 118 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 118 (316)
+....+.|+.|+.+.+. ..+. ...++.+++....++++.+ +..+.+++|-|.||..++.+|+.+|+.+
T Consensus 93 vG~AL~~GHPvYFV~F~-----p~P~--pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFF-----PEPE--PGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHcCCCeEEEEec-----CCCC--CCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 33333458998888764 1122 4568888888777777665 2338899999999999999999999999
Q ss_pred ceeeeecccccCCC--CCCCchhhhhhhccchhhhhhhcCC-------CchhhhhhhhhHHHH-HHHHhcCCCC-CCCCC
Q 021184 119 KALVNLSVVFRSRN--PATKPVDQYRALFGDDFYICRFQEP-------GVAEEDFAQIDTARL-IKKFLGGRSP-KPPCV 187 (316)
Q Consensus 119 ~~~il~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~ 187 (316)
.-+|+.+++...+. ....++......++..++....... ...-..+....+... +.+.+..... +....
T Consensus 166 gplvlaGaPlsywaG~~g~nPmRy~ggl~ggsw~~~l~sDlG~G~fdGa~lv~nFe~lnPa~~~w~K~y~Ly~~iD~e~~ 245 (581)
T PF11339_consen 166 GPLVLAGAPLSYWAGERGDNPMRYMGGLLGGSWLTALVSDLGNGRFDGAWLVQNFENLNPANTYWSKYYDLYANIDTERE 245 (581)
T ss_pred CceeecCCCcccccCCCCCCcHHHhcCCCcchHHHHHHHHcCCCccCcHHHHhhhhccChhHHHHHHHHHHHhccCCchh
Confidence 98888887766543 2233333333333444433322111 112223333333332 2222221110 00000
Q ss_pred CccccccCCCCCCCCCCCCChHHHHHHHHhh-cccccccccceeeccCcchhccCCCCCccccccEEEEeeCCCcccCCC
Q 021184 188 PKEIGFRGLPDLRTLPSWLSEEDVNYYASKF-SQKGFTGGLNYYRCLDLNWELLAPWTGAQIKIPVKFMVGDLDITYHIP 266 (316)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl~i~G~~D~~~~~~ 266 (316)
....|..++.... .++.+++......+ ..+.+.... ....... ..++++|+||+.++.|..|.++||+
T Consensus 246 Rfl~FErWwgg~~----~l~~~ei~~Iv~nLFvgNrL~~g~-~~~~~G~------~~DLr~Ir~Piivfas~gDnITPP~ 314 (581)
T PF11339_consen 246 RFLEFERWWGGFY----DLNGEEILWIVENLFVGNRLAKGE-FRVSDGR------RVDLRNIRSPIIVFASYGDNITPPQ 314 (581)
T ss_pred hhhHHHHHhCCcc----CCCHHHHHHHHHHHhccchhccCc-eeccCCc------EeehhhCCCCEEEEeccCCCCCChh
Confidence 0111333333222 23445554444333 222222111 1111111 1234499999999999999999998
Q ss_pred cchhh
Q 021184 267 GIREY 271 (316)
Q Consensus 267 ~~~~~ 271 (316)
.+-.+
T Consensus 315 QaL~W 319 (581)
T PF11339_consen 315 QALNW 319 (581)
T ss_pred Hhccc
Confidence 77544
No 138
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.21 E-value=1.9e-10 Score=89.50 Aligned_cols=64 Identities=14% Similarity=0.129 Sum_probs=46.7
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccC-CCceEEEEEcCCCcccc-ccchHHHHHHHHHHH
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDV-PGLQEVIVMEGVAHFIN-QEKADEVSSHIYDFI 313 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~gH~~~-~~~~~~~~~~i~~fl 313 (316)
..++|+++.+|..|.++|.....++++ .+.+.. .++ +++.+++.+|... .........+|.+=|
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~--~~c~~G~a~V-~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVA--KWCAAGGADV-EYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHH--HHHHcCCCCE-EEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 558999999999999999998888763 355665 566 9999999999863 333344445554433
No 139
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.21 E-value=8.8e-10 Score=79.88 Aligned_cols=125 Identities=14% Similarity=0.187 Sum_probs=89.8
Q ss_pred cceEEeeCCeeEEEEecC--------CCCeEEEEccCCCChhhHHHHHHHHhhC---CceEEecCCCCCCCCCC---C--
Q 021184 5 KHTTVATNGINMHVASIG--------TGPAVLFLHGFPELWYSWRKQLLYLSSR---GYRAIAPDLRGYGDTDA---P-- 68 (316)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g--------~~~~vv~~hG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~---~-- 68 (316)
.+.+++.+|..+.....+ +.+.+++++|.+|....|..++++|... .+.++.+-..||-.-+. .
T Consensus 2 ~e~~~~~~gl~~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~ 81 (301)
T KOG3975|consen 2 TEKEYTKSGLPTSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDH 81 (301)
T ss_pred cceeeeecCCcccceeeeeeeccCCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCccccccc
Confidence 455667777766554443 2578999999999999999999887654 25688888888755431 0
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhCc--cccceeeeeccccc
Q 021184 69 --PSITSYTALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLRP--DRVKALVNLSVVFR 129 (316)
Q Consensus 69 --~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p--~~v~~~il~~~~~~ 129 (316)
.....+++++.++--.++++.. ...+++++|||-|+++.+......- .+|.+++++-|...
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIe 148 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIE 148 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHH
Confidence 1114568888888777777665 2348999999999999999887422 35788888777653
No 140
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.19 E-value=1.9e-08 Score=77.11 Aligned_cols=107 Identities=16% Similarity=0.236 Sum_probs=78.2
Q ss_pred ccceEEeeCCeeEEEEecC-----CCCeEEEEccCCCChhhH-------HHHHHHHhhCCceEEecCCCCCCCCCCCCCC
Q 021184 4 IKHTTVATNGINMHVASIG-----TGPAVLFLHGFPELWYSW-------RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI 71 (316)
Q Consensus 4 ~~~~~~~~~g~~i~~~~~g-----~~~~vv~~hG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~ 71 (316)
++...++.|+..|.-..-. ++..||+.-|.++..+.. ..+.+...+.|-+|+.+++||.|.|.+..
T Consensus 112 ~kRv~Iq~D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~-- 189 (365)
T PF05677_consen 112 VKRVPIQYDGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP-- 189 (365)
T ss_pred eeeEEEeeCCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--
Confidence 4555677788877543322 356999999988766551 12233333458899999999999998765
Q ss_pred CCCCHHHHHHHHHHHHHHh-------CcceEEEEEechhHHHHHHHHHhCc
Q 021184 72 TSYTALHVVGDLVGLLDEF-------GIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.++++.|-.+.++++ +.++|++.|||+||.++..++.++.
T Consensus 190 ---s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 190 ---SRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred ---CHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 5688888888888776 2357999999999999998766654
No 141
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.16 E-value=4.7e-09 Score=78.78 Aligned_cols=95 Identities=22% Similarity=0.156 Sum_probs=70.7
Q ss_pred EEccCC--CChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCcceEEEEEechhHH
Q 021184 29 FLHGFP--ELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE-FGIEQVFLVGHDWGAL 105 (316)
Q Consensus 29 ~~hG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~G~S~Gg~ 105 (316)
++|+.+ ++...|..+...|... +.|+.+|.+|++.+.... .+.+++++.+...+.. ....+++++|||+||.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~ 76 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPLP----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGL 76 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCCC----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHH
Confidence 445544 6677899999999875 999999999998765432 3567777665554443 3456899999999999
Q ss_pred HHHHHHHh---Cccccceeeeecccc
Q 021184 106 IAWYFCLL---RPDRVKALVNLSVVF 128 (316)
Q Consensus 106 ~a~~~a~~---~p~~v~~~il~~~~~ 128 (316)
++...+.+ .++.+.+++++++..
T Consensus 77 ~a~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 77 LAHAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHHHhCCCCCcEEEEEccCC
Confidence 99988886 345688888887644
No 142
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.16 E-value=8.4e-11 Score=86.41 Aligned_cols=89 Identities=22% Similarity=0.334 Sum_probs=55.4
Q ss_pred CeEEEEccCCC-ChhhHHHHHHHHhhCCce---EEecCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHhCcceEEEE
Q 021184 25 PAVLFLHGFPE-LWYSWRKQLLYLSSRGYR---AIAPDLRGYGDTDAPPS--ITSYTALHVVGDLVGLLDEFGIEQVFLV 98 (316)
Q Consensus 25 ~~vv~~hG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
.||||+||.++ ....|..+.+.|.++||. |+++++-....+..... ....+..++.+.+.+++++-+. +|.||
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 48999999998 557899999999999999 89999844333221110 0111234555666666667788 99999
Q ss_pred EechhHHHHHHHHHhC
Q 021184 99 GHDWGALIAWYFCLLR 114 (316)
Q Consensus 99 G~S~Gg~~a~~~a~~~ 114 (316)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999988887643
No 143
>PRK04940 hypothetical protein; Provisional
Probab=99.15 E-value=3e-09 Score=74.88 Aligned_cols=89 Identities=21% Similarity=0.282 Sum_probs=54.1
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C-cceEEEEEech
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF---G-IEQVFLVGHDW 102 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~l~G~S~ 102 (316)
||++||+.++..+-..-++.+. .+.+|.+-+-.+ ...+.+.++.+.+.+..+ + .+++.+||.|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~-----~~~p~~~~~~l~-------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQ-----FIDPDVRLISYS-------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhhe-----eeCCCCeEEECC-------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7899999998877211122221 112232222001 123444445555555432 1 15789999999
Q ss_pred hHHHHHHHHHhCccccceeeeecccccC
Q 021184 103 GALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
||..|..+|.++. + ..|+++|+..+
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 9999999999985 4 56778987755
No 144
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.10 E-value=4.8e-10 Score=83.99 Aligned_cols=106 Identities=15% Similarity=0.197 Sum_probs=72.2
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCC------CCC----------------CCCC-----CH
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDA------PPS----------------ITSY-----TA 76 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~------~~~----------------~~~~-----~~ 76 (316)
-|.|||-||++++...|..+.-.|+.+||.|.++++|-+-.+-. +.. .... ..
T Consensus 118 ~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv 197 (399)
T KOG3847|consen 118 YPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQV 197 (399)
T ss_pred ccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHH
Confidence 48999999999999999999999999999999999986543311 000 0000 01
Q ss_pred HHHHHHHHH---HHHHh------------------------CcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 77 LHVVGDLVG---LLDEF------------------------GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 77 ~~~~~~~~~---~~~~~------------------------~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
..-+..... +++.+ ...++.++|||+||..++...+.+. .+++.|++++...
T Consensus 198 ~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 198 GQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAWMF 276 (399)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeeeec
Confidence 111111111 11111 2237899999999999998888764 5889998887654
Q ss_pred C
Q 021184 130 S 130 (316)
Q Consensus 130 ~ 130 (316)
+
T Consensus 277 P 277 (399)
T KOG3847|consen 277 P 277 (399)
T ss_pred c
Confidence 4
No 145
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.99 E-value=3.3e-09 Score=79.08 Aligned_cols=114 Identities=18% Similarity=0.228 Sum_probs=67.2
Q ss_pred CCeeEEEEecCC--------C-CeEEEEccCCCChhhHHHH-H-------HHHhhCCceEEecCCC-CCCCCCCCCCCCC
Q 021184 12 NGINMHVASIGT--------G-PAVLFLHGFPELWYSWRKQ-L-------LYLSSRGYRAIAPDLR-GYGDTDAPPSITS 73 (316)
Q Consensus 12 ~g~~i~~~~~g~--------~-~~vv~~hG~~~~~~~~~~~-~-------~~l~~~g~~v~~~d~~-G~G~s~~~~~~~~ 73 (316)
-|..+-|+.+-+ . |.|||+||.+..+..-... . ...-+.++-|+++.+- =+-.++.. ..
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~---t~ 246 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEK---TL 246 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccc---cc
Confidence 355666654421 2 8999999998765543221 1 1112223344444421 01111111 11
Q ss_pred CCHHHHHHHHHHHH-HHh--CcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 74 YTALHVVGDLVGLL-DEF--GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.-....++-+.+.+ ++. +..+|+++|.|+||+.++.++.++|+.+.+.+++++..
T Consensus 247 ~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 247 LYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred hhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 12333444444333 343 44589999999999999999999999999999999854
No 146
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.98 E-value=6.2e-10 Score=87.79 Aligned_cols=105 Identities=20% Similarity=0.249 Sum_probs=62.7
Q ss_pred CCeEEEEccCCCCh--hhH-HHHHHHHhh---CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------C
Q 021184 24 GPAVLFLHGFPELW--YSW-RKQLLYLSS---RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF------G 91 (316)
Q Consensus 24 ~~~vv~~hG~~~~~--~~~-~~~~~~l~~---~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~------~ 91 (316)
.|++|++|||.++. ..| ..+.+.+.+ ..++|+++|+...-.. . ..........+.+.+..++..+ .
T Consensus 71 ~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~-~-Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 71 KPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN-N-YPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp SEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc-c-ccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 68999999998877 345 445555544 3799999999532111 0 0000112233333444444332 4
Q ss_pred cceEEEEEechhHHHHHHHHHhCcc--ccceeeeecccccC
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLRPD--RVKALVNLSVVFRS 130 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~ 130 (316)
.+++++||||+||++|-.++..... +|..++.++|+...
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 5689999999999999999998777 89999999997643
No 147
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.87 E-value=3.1e-08 Score=74.60 Aligned_cols=105 Identities=14% Similarity=0.172 Sum_probs=67.8
Q ss_pred CCCeEEEEccCCCChhhH-HHHHHHHhhCCc--eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceE
Q 021184 23 TGPAVLFLHGFPELWYSW-RKQLLYLSSRGY--RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQV 95 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~-~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 95 (316)
++..+||+||+..+...- ...++.....++ .++.+.||+.|.-..-.. ...+......++.+++..+ +.++|
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~-d~~~a~~s~~~l~~~L~~L~~~~~~~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFY-DRESARFSGPALARFLRDLARAPGIKRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhh-hhhhHHHHHHHHHHHHHHHHhccCCceE
Confidence 467999999999876543 233222222233 799999998876322111 1223444445555555544 56799
Q ss_pred EEEEechhHHHHHHHHHh----Cc-----cccceeeeecccc
Q 021184 96 FLVGHDWGALIAWYFCLL----RP-----DRVKALVNLSVVF 128 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~----~p-----~~v~~~il~~~~~ 128 (316)
++++||||+.+.+.+... .+ .++..+|+++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 999999999999987664 21 2577888888744
No 148
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.86 E-value=4.8e-07 Score=66.28 Aligned_cols=104 Identities=21% Similarity=0.217 Sum_probs=73.7
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCC-----ceEEecCCCCC----CCCCCCC---------CCCCCCHHHHHHHHHHHH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRG-----YRAIAPDLRGY----GDTDAPP---------SITSYTALHVVGDLVGLL 87 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~----G~s~~~~---------~~~~~~~~~~~~~~~~~~ 87 (316)
|.||+||.+++..+...++..|...+ --++.+|--|. |.=+... .....+..++...+..++
T Consensus 47 PTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~m 126 (288)
T COG4814 47 PTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAM 126 (288)
T ss_pred ceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHH
Confidence 89999999999999999999998763 12555555552 1101100 012235555666666666
Q ss_pred HHh----CcceEEEEEechhHHHHHHHHHhCcc-----ccceeeeeccccc
Q 021184 88 DEF----GIEQVFLVGHDWGALIAWYFCLLRPD-----RVKALVNLSVVFR 129 (316)
Q Consensus 88 ~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~~ 129 (316)
.+| ++.++.++||||||.-...|+..+.. .++.+|.+++++.
T Consensus 127 syL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 127 SYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 555 67799999999999999999987643 4899999998776
No 149
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.85 E-value=5e-07 Score=71.11 Aligned_cols=103 Identities=18% Similarity=0.168 Sum_probs=69.4
Q ss_pred eEEEEccCCCCh---hhHHHHHHHHhhCCceEEecCCCCC--CCCCC--------------CCCCC--C---------CC
Q 021184 26 AVLFLHGFPELW---YSWRKQLLYLSSRGYRAIAPDLRGY--GDTDA--------------PPSIT--S---------YT 75 (316)
Q Consensus 26 ~vv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~--------------~~~~~--~---------~~ 75 (316)
.||++||.+.+. .....+...|.+.|+..+++.+|.- ..... ..... . ..
T Consensus 89 ~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (310)
T PF12048_consen 89 AVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEA 168 (310)
T ss_pred EEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHH
Confidence 899999998775 3567788899999999999988871 10000 00000 0 00
Q ss_pred ----HHHHHHHHHHHH---HHhCcceEEEEEechhHHHHHHHHHhCcc-ccceeeeecccc
Q 021184 76 ----ALHVVGDLVGLL---DEFGIEQVFLVGHDWGALIAWYFCLLRPD-RVKALVNLSVVF 128 (316)
Q Consensus 76 ----~~~~~~~~~~~~---~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~ 128 (316)
...+..-+.+++ ...+..+++|+||+.|+..++.+.+..+. .++++|++++..
T Consensus 169 ~~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 169 REAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 112222333333 33355679999999999999999998774 489999999854
No 150
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.83 E-value=5.9e-08 Score=80.80 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=80.8
Q ss_pred EEeeC---CeeEEEEecC------CCCeEEEEccCCCChhhHHHHHH-------------------HHhhCCceEEecCC
Q 021184 8 TVATN---GINMHVASIG------TGPAVLFLHGFPELWYSWRKQLL-------------------YLSSRGYRAIAPDL 59 (316)
Q Consensus 8 ~~~~~---g~~i~~~~~g------~~~~vv~~hG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d~ 59 (316)
++.++ +..++|.-.. +.|.||++.|.+|++..+-.+.+ .+.+. .+++.+|.
T Consensus 15 yl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~ 93 (415)
T PF00450_consen 15 YLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQ 93 (415)
T ss_dssp EEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--
T ss_pred EEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEee
Confidence 45554 6788776543 36899999999998887754422 12222 68999995
Q ss_pred -CCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CcceEEEEEechhHHHHHHHHHh----C------ccccce
Q 021184 60 -RGYGDTDAPPSI-TSYTALHVVGDLVGLLDEF-------GIEQVFLVGHDWGALIAWYFCLL----R------PDRVKA 120 (316)
Q Consensus 60 -~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~------p~~v~~ 120 (316)
.|.|.|...... ...+.++.++++.+++... ...+++|.|-|.||..+-.+|.. . +-.++|
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 499999766542 2457888888888888764 44589999999999887766654 2 234889
Q ss_pred eeeecccccC
Q 021184 121 LVNLSVVFRS 130 (316)
Q Consensus 121 ~il~~~~~~~ 130 (316)
+++.++...+
T Consensus 174 i~IGng~~dp 183 (415)
T PF00450_consen 174 IAIGNGWIDP 183 (415)
T ss_dssp EEEESE-SBH
T ss_pred ceecCccccc
Confidence 9999887654
No 151
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.82 E-value=8.7e-08 Score=71.95 Aligned_cols=124 Identities=20% Similarity=0.241 Sum_probs=82.8
Q ss_pred cceEEeeCCeeEEEEecC------CCCeEEEEccCCCChhhHHHHH--HHHh-hCCceEEecCC-------CCCCCCCCC
Q 021184 5 KHTTVATNGINMHVASIG------TGPAVLFLHGFPELWYSWRKQL--LYLS-SRGYRAIAPDL-------RGYGDTDAP 68 (316)
Q Consensus 5 ~~~~~~~~g~~i~~~~~g------~~~~vv~~hG~~~~~~~~~~~~--~~l~-~~g~~v~~~d~-------~G~G~s~~~ 68 (316)
+...+..+|.+..|...- ..|.||++||..++...+.... +.|+ +.||-|+.+|- .+.+.+..+
T Consensus 36 ~~~s~~~~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 36 SVASFDVNGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred CccccccCCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 344566777776665442 1469999999998877655443 4444 44899999953 222333222
Q ss_pred CC--CCCCCHHHHHHHHHHHHHHhCcc--eEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 69 PS--ITSYTALHVVGDLVGLLDEFGIE--QVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 69 ~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.+ ....+...+.+.+..++...+++ +|++.|.|-||.++..+++.+|+.+.++..+++..
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 21 11223344444555555565665 89999999999999999999999999988887754
No 152
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.82 E-value=1.6e-07 Score=71.79 Aligned_cols=64 Identities=11% Similarity=0.126 Sum_probs=52.1
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc-cchHHHHHHHHHHH
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ-EKADEVSSHIYDFI 313 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~~~i~~fl 313 (316)
...+|-|+++++.|.+++.+..++..+ ...+..-.+ +...+++++|..|+ .+|+++.+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~--~~~~~G~~V-~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAE--EARRKGWDV-RAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHH--HHHHcCCeE-EEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 567999999999999999998888653 223333345 88999999999977 58999999999985
No 153
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.77 E-value=3e-08 Score=81.09 Aligned_cols=97 Identities=22% Similarity=0.159 Sum_probs=58.7
Q ss_pred CCeEEEEccCC---CChhhHHHHHHHHhhCC--ceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--------h
Q 021184 24 GPAVLFLHGFP---ELWYSWRKQLLYLSSRG--YRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE--------F 90 (316)
Q Consensus 24 ~~~vv~~hG~~---~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~--------~ 90 (316)
.|.+|++||.+ ..++.+..+...|...| ..|-++|++.-- ...++...++.+..+.++ +
T Consensus 176 spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i--------gG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 176 SPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI--------GGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC--------CCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 57899999987 12222223333343332 566777776321 113455555555544442 2
Q ss_pred CcceEEEEEechhHHHHHHHHHhCcc-ccceeeeecccc
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRPD-RVKALVNLSVVF 128 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~ 128 (316)
...+|+|+|.|||+.++.+.+....+ -|+++|.++=+.
T Consensus 248 pha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl 286 (784)
T KOG3253|consen 248 PHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPL 286 (784)
T ss_pred CCCceEEEecccCceeeEEeccccCCceEEEEEEecccc
Confidence 34589999999998888887776543 378888777543
No 154
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.73 E-value=4.5e-08 Score=78.02 Aligned_cols=102 Identities=21% Similarity=0.287 Sum_probs=81.8
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCce---EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYR---AIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
-+++++||+..+...|..+...+...|+. ++.+++++-.... . .....+++..-+.+++...+.+++.++|||
T Consensus 60 ~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~--~~~~~~ql~~~V~~~l~~~ga~~v~LigHS 135 (336)
T COG1075 60 EPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTY--S--LAVRGEQLFAYVDEVLAKTGAKKVNLIGHS 135 (336)
T ss_pred ceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCc--c--ccccHHHHHHHHHHHHhhcCCCceEEEeec
Confidence 38999999988888888887778777777 8888888651111 1 344667777778888888888999999999
Q ss_pred hhHHHHHHHHHhCc--cccceeeeecccccC
Q 021184 102 WGALIAWYFCLLRP--DRVKALVNLSVVFRS 130 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p--~~v~~~il~~~~~~~ 130 (316)
|||..+..++...+ .+|+.++.++++-..
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 99999999999888 789999999986543
No 155
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.72 E-value=1.3e-06 Score=62.68 Aligned_cols=102 Identities=22% Similarity=0.308 Sum_probs=76.3
Q ss_pred CCeEEEEccCCCChh---hHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc----ceEE
Q 021184 24 GPAVLFLHGFPELWY---SWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI----EQVF 96 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 96 (316)
..-|||+-|++..-. ....+...|.+.+|.++-+-++.+-.- ....++.+-++|+..++++++. ..++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G-----~Gt~slk~D~edl~~l~~Hi~~~~fSt~vV 110 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNG-----YGTFSLKDDVEDLKCLLEHIQLCGFSTDVV 110 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccc-----cccccccccHHHHHHHHHHhhccCcccceE
Confidence 457999999886543 346778889999999998887642211 1234677788999999998743 3799
Q ss_pred EEEechhHHHHHHHHHh--CccccceeeeecccccC
Q 021184 97 LVGHDWGALIAWYFCLL--RPDRVKALVNLSVVFRS 130 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~~~ 130 (316)
++|||.|+.=.+.|... -|..+++.|+.+|+...
T Consensus 111 L~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 111 LVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred EEecCccchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 99999999998888833 35568888888887654
No 156
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.72 E-value=2.1e-07 Score=77.17 Aligned_cols=122 Identities=16% Similarity=0.201 Sum_probs=82.9
Q ss_pred EEeeCCeeEEEEec-----CCCCeEEEEccCCCChh---h--HHHHHH---HHhhCCceEEecCCCCCCCCCCCCCCCCC
Q 021184 8 TVATNGINMHVASI-----GTGPAVLFLHGFPELWY---S--WRKQLL---YLSSRGYRAIAPDLRGYGDTDAPPSITSY 74 (316)
Q Consensus 8 ~~~~~g~~i~~~~~-----g~~~~vv~~hG~~~~~~---~--~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~~~~~ 74 (316)
...-||++|+-..+ |+.|+++..+-++-... . -..... .++.+||.|+..|.||.|.|++..+. ..
T Consensus 24 V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~-~~ 102 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDP-ES 102 (563)
T ss_pred EEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccce-ec
Confidence 34449999975543 34678888883332222 1 112233 57889999999999999999987642 22
Q ss_pred C-HHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 75 T-ALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 75 ~-~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+ -.+-.-|+.+.+... ...+|..+|.|++|...+.+|+..|-.+++++...+....
T Consensus 103 ~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~ 161 (563)
T COG2936 103 SREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDR 161 (563)
T ss_pred cccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccc
Confidence 2 122223444444443 2248999999999999999999988889999888876653
No 157
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.68 E-value=7.1e-08 Score=72.10 Aligned_cols=85 Identities=19% Similarity=0.188 Sum_probs=50.0
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhC--CceEEecCCCCCCCCCCCCCCCCCCHHHHH----HHHHHHHHHhCc--ceEE
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSR--GYRAIAPDLRGYGDTDAPPSITSYTALHVV----GDLVGLLDEFGI--EQVF 96 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~ 96 (316)
..|||+||+.++...|..+...+... .+.--.+...++...... ...+++..+ +.+.+.++.... .+++
T Consensus 5 hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~---T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 5 HLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK---TFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc---cchhhHHHHHHHHHHHHHhccccccccccce
Confidence 47999999999999998887776651 122112222222111110 122344444 444444443333 4899
Q ss_pred EEEechhHHHHHHHHH
Q 021184 97 LVGHDWGALIAWYFCL 112 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~ 112 (316)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999999876555
No 158
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.66 E-value=3.4e-07 Score=66.76 Aligned_cols=83 Identities=19% Similarity=0.208 Sum_probs=56.8
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCce-EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEech
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYR-AIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
...|||..|||.+...+..+. ...++. ++++|+|..-. +. |+ -+.+.+.|||+||
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~----------d~-----~~------~~y~~i~lvAWSm 66 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDF----------DF-----DL------SGYREIYLVAWSM 66 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCccccc----------cc-----cc------ccCceEEEEEEeH
Confidence 468999999999987775543 122354 56778873211 10 11 1457899999999
Q ss_pred hHHHHHHHHHhCccccceeeeecccccCCC
Q 021184 103 GALIAWYFCLLRPDRVKALVNLSVVFRSRN 132 (316)
Q Consensus 103 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~ 132 (316)
|-.+|..+....| ++..|.+++...+.+
T Consensus 67 GVw~A~~~l~~~~--~~~aiAINGT~~Pid 94 (213)
T PF04301_consen 67 GVWAANRVLQGIP--FKRAIAINGTPYPID 94 (213)
T ss_pred HHHHHHHHhccCC--cceeEEEECCCCCcC
Confidence 9999988876554 677788887776544
No 159
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.66 E-value=1.8e-07 Score=71.61 Aligned_cols=99 Identities=18% Similarity=0.243 Sum_probs=69.7
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCc--ceEEEEEec
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDL-VGLLDEFGI--EQVFLVGHD 101 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~l~G~S 101 (316)
..||+.-|..+-.+.- .+..=++.||.|+.+++||++.|.+.+- ..+....++.+ .-.+..++. +.|++.|||
T Consensus 244 ~LvIC~EGNAGFYEvG--~m~tP~~lgYsvLGwNhPGFagSTG~P~--p~n~~nA~DaVvQfAI~~Lgf~~edIilygWS 319 (517)
T KOG1553|consen 244 DLVICFEGNAGFYEVG--VMNTPAQLGYSVLGWNHPGFAGSTGLPY--PVNTLNAADAVVQFAIQVLGFRQEDIILYGWS 319 (517)
T ss_pred eEEEEecCCccceEee--eecChHHhCceeeccCCCCccccCCCCC--cccchHHHHHHHHHHHHHcCCCccceEEEEee
Confidence 4677777766544321 1222234589999999999999988763 33333333333 334556665 469999999
Q ss_pred hhHHHHHHHHHhCccccceeeeecccc
Q 021184 102 WGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.||.-+..+|..||+ |+++|+-++.-
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecchh
Confidence 999999999999996 99999877653
No 160
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=2.3e-06 Score=63.19 Aligned_cols=56 Identities=25% Similarity=0.289 Sum_probs=48.1
Q ss_pred EEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccc-cccchHHHHHHHHHHHhh
Q 021184 252 VKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFI-NQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 252 vl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~-~~~~~~~~~~~i~~fl~~ 315 (316)
+.++.+++|.++|...... +++..|++ ++..+++ ||.. ++-+.+.+...|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~------lQ~~WPg~-eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS------LQEIWPGC-EVRYLEG-GHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHH------HHHhCCCC-EEEEeec-CceeeeehhchHHHHHHHHHHHh
Confidence 6778899999999988876 77899999 9999995 9976 777889999999888765
No 161
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.57 E-value=1.4e-06 Score=72.76 Aligned_cols=115 Identities=18% Similarity=0.250 Sum_probs=74.4
Q ss_pred eEEEEecCC-----CCeEEEEccCCCChhh-H--HHHHHHHhhC-CceEEecCCCCCCCCCCCCC-----CCCCCHHHHH
Q 021184 15 NMHVASIGT-----GPAVLFLHGFPELWYS-W--RKQLLYLSSR-GYRAIAPDLRGYGDTDAPPS-----ITSYTALHVV 80 (316)
Q Consensus 15 ~i~~~~~g~-----~~~vv~~hG~~~~~~~-~--~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~ 80 (316)
+.+|....+ +|++|++-|= +.... + ..+...|+++ |-.++++++|-+|.|.+..+ ....+.++..
T Consensus 15 ~qRY~~n~~~~~~~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QAL 93 (434)
T PF05577_consen 15 SQRYWVNDQYYKPGGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQAL 93 (434)
T ss_dssp EEEEEEE-TT--TTSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHH
T ss_pred EEEEEEEhhhcCCCCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHH
Confidence 456665432 5555555444 33332 2 2244455554 67899999999999976432 2456899999
Q ss_pred HHHHHHHHHhC-------cceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 81 GDLVGLLDEFG-------IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 81 ~~~~~~~~~~~-------~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+|+..+++++. ..|++++|.|.||++|..+-.+||+.|.|.+.-+++...
T Consensus 94 aD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 94 ADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred HHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 99999998763 137999999999999999999999999999998887654
No 162
>PLN02209 serine carboxypeptidase
Probab=98.54 E-value=2.3e-05 Score=64.71 Aligned_cols=117 Identities=15% Similarity=0.146 Sum_probs=73.1
Q ss_pred CeeEEEEecC------CCCeEEEEccCCCChhhHHHHHH----------------HH-------hhCCceEEecC-CCCC
Q 021184 13 GINMHVASIG------TGPAVLFLHGFPELWYSWRKQLL----------------YL-------SSRGYRAIAPD-LRGY 62 (316)
Q Consensus 13 g~~i~~~~~g------~~~~vv~~hG~~~~~~~~~~~~~----------------~l-------~~~g~~v~~~d-~~G~ 62 (316)
+..++|.-.. +.|.|+++.|.+|.+..+..+.+ .| .+. .+++.+| ..|.
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqPvGt 129 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANIIFLDQPVGS 129 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcEEEecCCCCC
Confidence 4566665432 26899999999988765533221 11 122 5788999 6689
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CcceEEEEEechhHHHHHHHHHhC----------ccccceeeeec
Q 021184 63 GDTDAPPSITSYTALHVVGDLVGLLDEF-------GIEQVFLVGHDWGALIAWYFCLLR----------PDRVKALVNLS 125 (316)
Q Consensus 63 G~s~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~----------p~~v~~~il~~ 125 (316)
|.|.........+.++.++++.+++... ...+++|.|.|.||..+-.+|..- +=.++|+++.+
T Consensus 130 GfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~ign 209 (437)
T PLN02209 130 GFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGN 209 (437)
T ss_pred CccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecC
Confidence 9986443212223334456666666543 234899999999998777666531 11467888888
Q ss_pred ccccC
Q 021184 126 VVFRS 130 (316)
Q Consensus 126 ~~~~~ 130 (316)
+...+
T Consensus 210 g~td~ 214 (437)
T PLN02209 210 PITHI 214 (437)
T ss_pred cccCh
Confidence 76544
No 163
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.53 E-value=1.3e-06 Score=69.49 Aligned_cols=60 Identities=13% Similarity=0.226 Sum_probs=49.8
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
++++|.++|.|..|.+..+....-++ ..+|+.+.+..+|+++|.... ..+.+.+..|++.
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~------d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYY------DKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHH------hhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 78999999999999999999888765 667777689999999999865 5566777777653
No 164
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.51 E-value=7.5e-07 Score=63.35 Aligned_cols=107 Identities=24% Similarity=0.339 Sum_probs=72.3
Q ss_pred CCeEEEEccCCCChhhHH---HHHHHHhhCCceEEecCC--CCC---CCCCCCC-------------CC--CCCCH-HHH
Q 021184 24 GPAVLFLHGFPELWYSWR---KQLLYLSSRGYRAIAPDL--RGY---GDTDAPP-------------SI--TSYTA-LHV 79 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~---~~~~~l~~~g~~v~~~d~--~G~---G~s~~~~-------------~~--~~~~~-~~~ 79 (316)
-|++.++-|+.++.+.+. .+.+.-+++|+.|+.+|- ||. |.++.-. +. ..+.+ +.+
T Consensus 44 ~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv 123 (283)
T KOG3101|consen 44 CPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYV 123 (283)
T ss_pred CceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHH
Confidence 478999999999887653 334556678999999995 443 2221100 00 01122 223
Q ss_pred HHHHHHHHHH----hCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 80 VGDLVGLLDE----FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 80 ~~~~~~~~~~----~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
++.+.++++. ++..++.|.||||||+=|+..+.+.|++.+++-..+|...+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 4455555552 24457999999999999999999999999998888887654
No 165
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.48 E-value=3.9e-07 Score=70.38 Aligned_cols=52 Identities=21% Similarity=0.393 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHh-Ccc--eEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 79 VVGDLVGLLDEF-GIE--QVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 79 ~~~~~~~~~~~~-~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+.+++...++.- ... +..++|+||||..|+.++.++|+.+.++++++|....
T Consensus 98 l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 98 LTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred hhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 334555555442 322 2799999999999999999999999999999987654
No 166
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.47 E-value=1.7e-06 Score=70.75 Aligned_cols=111 Identities=23% Similarity=0.391 Sum_probs=70.8
Q ss_pred eeCCeeEEEEecCCCCeEEEEc-cCCCChhhHHHHHHHHhhCCce------EEecCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021184 10 ATNGINMHVASIGTGPAVLFLH-GFPELWYSWRKQLLYLSSRGYR------AIAPDLRGYGDTDAPPSITSYTALHVVGD 82 (316)
Q Consensus 10 ~~~g~~i~~~~~g~~~~vv~~h-G~~~~~~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
..+|+.+.+...|.-..|-.+- ........|..+++.|.+.||. ..-+|+|---. ..+++...
T Consensus 36 ~~~gv~i~~~~~g~~~~i~~ld~~~~~~~~~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~----------~~~~~~~~ 105 (389)
T PF02450_consen 36 NDPGVEIRVPGFGGTSGIEYLDPSFITGYWYFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA----------ERDEYFTK 105 (389)
T ss_pred cCCCceeecCCCCceeeeeecccccccccchHHHHHHHHHhcCcccCCEEEEEeechhhchh----------hHHHHHHH
Confidence 3456666665555322222222 2222222789999999988874 22368772111 23455555
Q ss_pred HHHHHHHh---CcceEEEEEechhHHHHHHHHHhCcc------ccceeeeecccccC
Q 021184 83 LVGLLDEF---GIEQVFLVGHDWGALIAWYFCLLRPD------RVKALVNLSVVFRS 130 (316)
Q Consensus 83 ~~~~~~~~---~~~~~~l~G~S~Gg~~a~~~a~~~p~------~v~~~il~~~~~~~ 130 (316)
+...++.. ..++++|+||||||.++..+....+. .|+++|.++++...
T Consensus 106 lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 106 LKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 55555543 34699999999999999999988743 59999999987654
No 167
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=98.45 E-value=6.3e-06 Score=64.81 Aligned_cols=84 Identities=20% Similarity=0.215 Sum_probs=62.9
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceEEEEEec
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQVFLVGHD 101 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S 101 (316)
.-||+-|=|+....=..+.++|.++|+.|+.+|-.=|-.| ..+.++.++|+..+++.. +..++.++|+|
T Consensus 262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~-------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWS-------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhc-------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4566666666555556788999999999999995434333 347888999999998765 55689999999
Q ss_pred hhHHHHHHHHHhCcc
Q 021184 102 WGALIAWYFCLLRPD 116 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~ 116 (316)
+|+-+.-....+-|.
T Consensus 335 fGADvlP~~~n~L~~ 349 (456)
T COG3946 335 FGADVLPFAYNRLPP 349 (456)
T ss_pred ccchhhHHHHHhCCH
Confidence 999777666655553
No 168
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.44 E-value=2.3e-06 Score=66.45 Aligned_cols=104 Identities=13% Similarity=0.179 Sum_probs=68.0
Q ss_pred CCeEEEEccCCCChh-hHHHHHHHHhhCCc--eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceEE
Q 021184 24 GPAVLFLHGFPELWY-SWRKQLLYLSSRGY--RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQVF 96 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 96 (316)
+..+||+||+..+-+ .-.+.++.....|+ ..+.+.||..|.--.... ...+...-..++..++..+ ..++|+
T Consensus 116 k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~-DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 116 KTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY-DRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc-chhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 568999999987654 34455555555544 677888887665422111 1223333444555555554 566899
Q ss_pred EEEechhHHHHHHHHHh--------Cccccceeeeecccc
Q 021184 97 LVGHDWGALIAWYFCLL--------RPDRVKALVNLSVVF 128 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~--------~p~~v~~~il~~~~~ 128 (316)
|++||||.++++....+ -+.+++-+|+.+|-.
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999987764 234678888888744
No 169
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.42 E-value=2.7e-06 Score=69.76 Aligned_cols=103 Identities=20% Similarity=0.234 Sum_probs=63.0
Q ss_pred CCeEEEEccCCCCh-hhHHHHHHHHhhCC----ceEEecCCCCCCCCCCCCCCC-CCC-HHHHHHHHHHHHHHh-----C
Q 021184 24 GPAVLFLHGFPELW-YSWRKQLLYLSSRG----YRAIAPDLRGYGDTDAPPSIT-SYT-ALHVVGDLVGLLDEF-----G 91 (316)
Q Consensus 24 ~~~vv~~hG~~~~~-~~~~~~~~~l~~~g----~~v~~~d~~G~G~s~~~~~~~-~~~-~~~~~~~~~~~~~~~-----~ 91 (316)
.|+|+++||..... ......++.|.+.| ..++.+|..+.. ....+.. .-. .+.+++++.-.++.. +
T Consensus 209 ~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 209 RPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 47899999954221 12234455565555 346777753211 1111100 001 222334554445442 3
Q ss_pred cceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 92 IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 3468999999999999999999999999999999864
No 170
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.38 E-value=1.8e-05 Score=65.30 Aligned_cols=65 Identities=12% Similarity=0.195 Sum_probs=49.5
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCcc------------------ccCCC-ceEEEEEcCCCccccccchHHHHHHH
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFK------------------KDVPG-LQEVIVMEGVAHFINQEKADEVSSHI 309 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~------------------~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
..+||+..|+.|.+||....+.+++.-.+. +...+ . +++.+-+|||++. .+|+...+.+
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~l-tfv~V~~AGHmVp-~qP~~al~m~ 424 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKM-TFATIKAGGHTAE-YRPNETFIMF 424 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCce-EEEEEcCCCCCCC-CCHHHHHHHH
Confidence 589999999999999987776665432111 11122 4 7788899999996 5999999999
Q ss_pred HHHHhh
Q 021184 310 YDFIKQ 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
..|++.
T Consensus 425 ~~Fi~~ 430 (433)
T PLN03016 425 QRWISG 430 (433)
T ss_pred HHHHcC
Confidence 999964
No 171
>PLN02606 palmitoyl-protein thioesterase
Probab=98.35 E-value=2.6e-06 Score=65.22 Aligned_cols=102 Identities=17% Similarity=0.139 Sum_probs=69.0
Q ss_pred CCCeEEEEccCC--CChhhHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--cceEEE
Q 021184 23 TGPAVLFLHGFP--ELWYSWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG--IEQVFL 97 (316)
Q Consensus 23 ~~~~vv~~hG~~--~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l 97 (316)
...|||+.||++ ++...+..+.+.+.+ .|+.+.++. .|-+.... ...+..+.++.+.+.+.... .+-+++
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s----~~~~~~~Qv~~vce~l~~~~~L~~G~na 99 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDS----LFMPLRQQASIACEKIKQMKELSEGYNI 99 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccc----cccCHHHHHHHHHHHHhcchhhcCceEE
Confidence 345999999999 555577777777752 366555554 23222111 12355666666665555421 125999
Q ss_pred EEechhHHHHHHHHHhCcc--ccceeeeeccccc
Q 021184 98 VGHDWGALIAWYFCLLRPD--RVKALVNLSVVFR 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~ 129 (316)
+|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 100 IGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 100 VAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred EEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 9999999999999999887 4999999998643
No 172
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.32 E-value=0.00016 Score=59.44 Aligned_cols=123 Identities=15% Similarity=0.076 Sum_probs=77.9
Q ss_pred eEEeeC---CeeEEEEecC------CCCeEEEEccCCCChhhHHHHHHHHh-----hC-------------CceEEecCC
Q 021184 7 TTVATN---GINMHVASIG------TGPAVLFLHGFPELWYSWRKQLLYLS-----SR-------------GYRAIAPDL 59 (316)
Q Consensus 7 ~~~~~~---g~~i~~~~~g------~~~~vv~~hG~~~~~~~~~~~~~~l~-----~~-------------g~~v~~~d~ 59 (316)
-+++++ +..++|+-.. ..|.||++.|.+|.+..- .+..++. .. --+++.+|.
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~ 125 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQ 125 (454)
T ss_pred ceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEec
Confidence 456665 7888877543 268999999998876544 2222111 11 135777787
Q ss_pred C-CCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh-------CcceEEEEEechhHHHHHHHHHh----C-----c-cccce
Q 021184 60 R-GYGDTDAPPSI-TSYTALHVVGDLVGLLDEF-------GIEQVFLVGHDWGALIAWYFCLL----R-----P-DRVKA 120 (316)
Q Consensus 60 ~-G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~l~G~S~Gg~~a~~~a~~----~-----p-~~v~~ 120 (316)
| |-|.|...... ...+-+..++|...++... ..++++|.|-|.+|+.+-.+|.. . | -.++|
T Consensus 126 PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG 205 (454)
T KOG1282|consen 126 PVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKG 205 (454)
T ss_pred CCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceE
Confidence 6 88888644321 1234555666666666432 34589999999999777666653 2 1 24788
Q ss_pred eeeecccccC
Q 021184 121 LVNLSVVFRS 130 (316)
Q Consensus 121 ~il~~~~~~~ 130 (316)
+++-+|....
T Consensus 206 ~~IGNg~td~ 215 (454)
T KOG1282|consen 206 YAIGNGLTDP 215 (454)
T ss_pred EEecCcccCc
Confidence 8888877654
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.29 E-value=2.5e-06 Score=72.75 Aligned_cols=105 Identities=16% Similarity=0.087 Sum_probs=64.8
Q ss_pred CCeEEEEccCCC---ChhhHHHHHHHHhhC--CceEEecCCC-C---CCCCCCCCCCCCCCHHHHHHHHHHH---HHHhC
Q 021184 24 GPAVLFLHGFPE---LWYSWRKQLLYLSSR--GYRAIAPDLR-G---YGDTDAPPSITSYTALHVVGDLVGL---LDEFG 91 (316)
Q Consensus 24 ~~~vv~~hG~~~---~~~~~~~~~~~l~~~--g~~v~~~d~~-G---~G~s~~~~~~~~~~~~~~~~~~~~~---~~~~~ 91 (316)
.|+||++||.+. +...+ ....|+.. |+.|+++++| | +..+..........+.|....+.-+ ++..|
T Consensus 95 ~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 95 LPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 589999999753 22222 22334333 3999999999 3 3322221111233445554444433 34444
Q ss_pred --cceEEEEEechhHHHHHHHHHh--CccccceeeeecccccC
Q 021184 92 --IEQVFLVGHDWGALIAWYFCLL--RPDRVKALVNLSVVFRS 130 (316)
Q Consensus 92 --~~~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~~~ 130 (316)
.++|.++|+|.||..+..++.. .+..++++|+.++....
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 4589999999999999888776 33468999998876543
No 174
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.25 E-value=0.0001 Score=62.04 Aligned_cols=120 Identities=18% Similarity=0.233 Sum_probs=84.0
Q ss_pred eCCeeEEEEe--------cCCCCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCC------CCCCCCC
Q 021184 11 TNGINMHVAS--------IGTGPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDA------PPSITSY 74 (316)
Q Consensus 11 ~~g~~i~~~~--------~g~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~------~~~~~~~ 74 (316)
.||.+|.+.. .|+.|.+|..-|.-+.+. .|....-.|.+.|+---....||=|.-.. .......
T Consensus 427 ~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~N 506 (682)
T COG1770 427 DDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKN 506 (682)
T ss_pred CCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccc
Confidence 4777665332 245678888777644332 34444446778888777777788655422 1112455
Q ss_pred CHHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 75 TALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
++.|+++....+++.- ..++++++|.|-||++.-..+...|+.++++|+-.|....
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDv 564 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDV 564 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccch
Confidence 8888888877777652 3347999999999999999999999999999998887654
No 175
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.24 E-value=7.2e-06 Score=67.83 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=81.4
Q ss_pred cceEEee-CCeeEEEEecCC------CCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCCC------C
Q 021184 5 KHTTVAT-NGINMHVASIGT------GPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDAP------P 69 (316)
Q Consensus 5 ~~~~~~~-~g~~i~~~~~g~------~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~------~ 69 (316)
++.+.++ ||.+|.|...++ .|++|+--|...-+. .|........++|...+..+.||=|+=.+. .
T Consensus 395 eQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k 474 (648)
T COG1505 395 EQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMK 474 (648)
T ss_pred EEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhh
Confidence 4444444 899999887641 466666555443322 466666777888999999999996653221 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 70 SITSYTALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
......++|+++-..++++.- ..+++.+.|.|-||.+.-....++|+.+.++|+--|..
T Consensus 475 ~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPll 535 (648)
T COG1505 475 ENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLL 535 (648)
T ss_pred hcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchh
Confidence 112224444444444444431 33578999999999999999999999888888666644
No 176
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.22 E-value=1.6e-05 Score=59.13 Aligned_cols=99 Identities=17% Similarity=0.169 Sum_probs=69.6
Q ss_pred CeEEEEccCCCChhh--HHHHHHHHhhC-CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--cceEEEEE
Q 021184 25 PAVLFLHGFPELWYS--WRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG--IEQVFLVG 99 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~G 99 (316)
.|+|++||++.+... +..+.+.+.+. |..|++.|. |-|- ... .-....+.++.+.+.+.... .+-+.++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~--~~s--~l~pl~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI--KDS--SLMPLWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc--chh--hhccHHHHHHHHHHHHhcchhccCceEEEE
Confidence 589999999987765 66666666654 788999986 4441 111 22346666666666665432 13589999
Q ss_pred echhHHHHHHHHHhCcc-ccceeeeecccc
Q 021184 100 HDWGALIAWYFCLLRPD-RVKALVNLSVVF 128 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~ 128 (316)
.|.||.++-.++..-++ .|+..|.++++-
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999999988887554 588999888753
No 177
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.20 E-value=2.4e-06 Score=55.45 Aligned_cols=61 Identities=18% Similarity=0.317 Sum_probs=51.6
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
-..|+|++.++.|+..|.+.++. +++.++++ +++.+++.||..+.....-+.+.+.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~------~~~~l~~s-~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARA------MAARLPGS-RLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHH------HHHHCCCc-eEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 35999999999999999998877 77889998 999999999998864445567888888863
No 178
>COG3150 Predicted esterase [General function prediction only]
Probab=98.18 E-value=8.2e-06 Score=55.95 Aligned_cols=90 Identities=21% Similarity=0.343 Sum_probs=65.0
Q ss_pred EEEEccCCCChhhHHHHH--HHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhH
Q 021184 27 VLFLHGFPELWYSWRKQL--LYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGA 104 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~--~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
||++||+-+|..+..... +.+.+. .|-.+.+.+.. ..++.+.++.+..++...+.+.+.|+|-|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~l---~h~p~~a~~ele~~i~~~~~~~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPHL---PHDPQQALKELEKAVQELGDESPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCCC---CCCHHHHHHHHHHHHHHcCCCCceEEeecchH
Confidence 799999998887775432 233332 22223333222 45789999999999999987789999999999
Q ss_pred HHHHHHHHhCccccceeeeecccccC
Q 021184 105 LIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+.|.+++.++. ++++ +++|...+
T Consensus 71 Y~At~l~~~~G--irav-~~NPav~P 93 (191)
T COG3150 71 YYATWLGFLCG--IRAV-VFNPAVRP 93 (191)
T ss_pred HHHHHHHHHhC--Chhh-hcCCCcCc
Confidence 99999999985 5554 46776544
No 179
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.17 E-value=2.9e-05 Score=61.53 Aligned_cols=64 Identities=13% Similarity=0.249 Sum_probs=47.8
Q ss_pred ccc-ccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchH---HHHHHHHHHHhh
Q 021184 247 QIK-IPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKAD---EVSSHIYDFIKQ 315 (316)
Q Consensus 247 ~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~---~~~~~i~~fl~~ 315 (316)
++. +|+|+++|..|..+|.......+.. ...... +...+++++|......+. +..+.+.+|+.+
T Consensus 229 ~i~~~P~l~~~G~~D~~vp~~~~~~~~~~----~~~~~~-~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~ 296 (299)
T COG1073 229 KISPRPVLLVHGERDEVVPLRDAEDLYEA----ARERPK-KLLFVPGGGHIDLYDNPPAVEQALDKLAEFLER 296 (299)
T ss_pred hcCCcceEEEecCCCcccchhhhHHHHhh----hccCCc-eEEEecCCccccccCccHHHHHHHHHHHHHHHH
Confidence 455 8999999999999999988886531 111134 778888889998754333 788899999876
No 180
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.16 E-value=1.1e-05 Score=68.69 Aligned_cols=100 Identities=21% Similarity=0.245 Sum_probs=62.0
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHh----------------hCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLS----------------SRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLL 87 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~----------------~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~ 87 (316)
|-||+|++|..|+....+.++.... ...++.+++|+-+ .-......+..+.++-+.+.+
T Consensus 89 GIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnE-----e~tAm~G~~l~dQtEYV~dAI 163 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNE-----EFTAMHGHILLDQTEYVNDAI 163 (973)
T ss_pred CceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccc-----hhhhhccHhHHHHHHHHHHHH
Confidence 4599999999998776665544332 1135566666532 111113446666666666665
Q ss_pred HHh-----C--------cceEEEEEechhHHHHHHHHHh---Cccccceeeeecccc
Q 021184 88 DEF-----G--------IEQVFLVGHDWGALIAWYFCLL---RPDRVKALVNLSVVF 128 (316)
Q Consensus 88 ~~~-----~--------~~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~~il~~~~~ 128 (316)
+.+ + ...++++||||||.+|...+.. .++.|.-++..+++-
T Consensus 164 k~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 164 KYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 543 2 2249999999999999877653 234566666666543
No 181
>COG0627 Predicted esterase [General function prediction only]
Probab=98.13 E-value=1.4e-05 Score=62.74 Aligned_cols=109 Identities=19% Similarity=0.210 Sum_probs=70.8
Q ss_pred CCeEEEEccCCCChhhH---HHHHHHHhhCCceEEecCCC--------------CCCCCCCCCCC------CCCCHHHHH
Q 021184 24 GPAVLFLHGFPELWYSW---RKQLLYLSSRGYRAIAPDLR--------------GYGDTDAPPSI------TSYTALHVV 80 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~~~~~------~~~~~~~~~ 80 (316)
-|+++++||..++...+ ..+-+...+.|+.++++|-. |-+.|-..... ..+.+++++
T Consensus 54 ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~tfl 133 (316)
T COG0627 54 IPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWETFL 133 (316)
T ss_pred CCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhHHH
Confidence 46899999998875433 33445556668888887432 33333111100 114444443
Q ss_pred -HHHHHHHHHhCc-----ceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCC
Q 021184 81 -GDLVGLLDEFGI-----EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRN 132 (316)
Q Consensus 81 -~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~ 132 (316)
..+-..+++... ++..++||||||.-|+.+|+++|++++.+..+++...+..
T Consensus 134 ~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~ 191 (316)
T COG0627 134 TQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSS 191 (316)
T ss_pred HhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccc
Confidence 355544443322 2688999999999999999999999999999999877643
No 182
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.12 E-value=3.5e-05 Score=59.21 Aligned_cols=102 Identities=13% Similarity=0.096 Sum_probs=69.3
Q ss_pred CCCeEEEEccCCCChh--hHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--cceEEE
Q 021184 23 TGPAVLFLHGFPELWY--SWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG--IEQVFL 97 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~--~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l 97 (316)
...|+|+.||+|.+.. ....+.+.+.+ .|..+.++.. |.+. .+..-.+..+.++.+.+.+.... .+-+++
T Consensus 24 ~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~--~~s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 24 VSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV--GDSWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred CCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc--cccceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 3568999999997654 44555555533 2667776654 3331 11123456666666666665421 125999
Q ss_pred EEechhHHHHHHHHHhCcc--ccceeeeeccccc
Q 021184 98 VGHDWGALIAWYFCLLRPD--RVKALVNLSVVFR 129 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~ 129 (316)
+|+|.||.++-.++.+.|+ .|+.+|.++++-.
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999987 5999999998643
No 183
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.08 E-value=2.2e-05 Score=62.00 Aligned_cols=104 Identities=19% Similarity=0.213 Sum_probs=77.4
Q ss_pred CeEEEEccCCCChhhHHH---HHHHHhh-CCceEEecCCCCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHHhCc
Q 021184 25 PAVLFLHGFPELWYSWRK---QLLYLSS-RGYRAIAPDLRGYGDTDAPPS--------ITSYTALHVVGDLVGLLDEFGI 92 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~---~~~~l~~-~g~~v~~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
-||+|.-|.-++.+.+.. ++..++. .+--++..++|-+|+|-+--. ....+.++-.+|...++..++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 578888898877665532 2333333 356788899999999965321 1234777888888888887743
Q ss_pred ------ceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 93 ------EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 93 ------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
.+++.+|.|.||+++..+=.+||+.+.|.+..+.+.
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 379999999999999999999999988887766654
No 184
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=98.07 E-value=0.00097 Score=53.26 Aligned_cols=65 Identities=12% Similarity=0.195 Sum_probs=48.8
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCc------------------cccCCC-ceEEEEEcCCCccccccchHHHHHHH
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGF------------------KKDVPG-LQEVIVMEGVAHFINQEKADEVSSHI 309 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l------------------~~~~~~-~~~~~~~~~~gH~~~~~~~~~~~~~i 309 (316)
.++||+..|+.|.+|+.-..+.+++.-.+ .+...+ . +++.+.+|||+++ .+|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~l-tf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKM-TFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcc-eEEEEcCCCCCCC-cCHHHHHHHH
Confidence 48999999999999997666665543211 111122 5 7788889999996 5999999999
Q ss_pred HHHHhh
Q 021184 310 YDFIKQ 315 (316)
Q Consensus 310 ~~fl~~ 315 (316)
..|+..
T Consensus 311 ~~fi~~ 316 (319)
T PLN02213 311 QRWISG 316 (319)
T ss_pred HHHHcC
Confidence 999964
No 185
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.05 E-value=7.8e-05 Score=60.80 Aligned_cols=120 Identities=16% Similarity=0.133 Sum_probs=74.0
Q ss_pred eeCCeeEEEEecC---C-CCeEEEEccCC---CChhhHHHHHHHHhhCC-ceEEecCCCC--CCC---CCCC---CCCCC
Q 021184 10 ATNGINMHVASIG---T-GPAVLFLHGFP---ELWYSWRKQLLYLSSRG-YRAIAPDLRG--YGD---TDAP---PSITS 73 (316)
Q Consensus 10 ~~~g~~i~~~~~g---~-~~~vv~~hG~~---~~~~~~~~~~~~l~~~g-~~v~~~d~~G--~G~---s~~~---~~~~~ 73 (316)
+.|...+..+... + .|++|+|||.+ ++......--..|++.| +-|+++++|= .|. |... .....
T Consensus 76 sEDCL~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n 155 (491)
T COG2272 76 SEDCLYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN 155 (491)
T ss_pred cccceeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccc
Confidence 3355556555443 2 48999999975 33333223346788888 8999999871 111 1111 10012
Q ss_pred CCHHHHHHHH---HHHHHHhCcc--eEEEEEechhHHHHHHHHHh--Cccccceeeeeccccc
Q 021184 74 YTALHVVGDL---VGLLDEFGIE--QVFLVGHDWGALIAWYFCLL--RPDRVKALVNLSVVFR 129 (316)
Q Consensus 74 ~~~~~~~~~~---~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~--~p~~v~~~il~~~~~~ 129 (316)
..+.|.+..+ .+-|++.|.+ +|.|+|+|-||+.++.+.+. ....++++|+.++...
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 3455555444 4445566554 79999999999988877664 2235888888888765
No 186
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.05 E-value=5.7e-06 Score=62.85 Aligned_cols=104 Identities=13% Similarity=0.083 Sum_probs=54.3
Q ss_pred CCeEEEEccCCCCh---hhHHHHHHHHhh--CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-c-ceEE
Q 021184 24 GPAVLFLHGFPELW---YSWRKQLLYLSS--RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG-I-EQVF 96 (316)
Q Consensus 24 ~~~vv~~hG~~~~~---~~~~~~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 96 (316)
..|||+.||+|.+. ..+..+.+.+.+ -|..|.+++.- -+.+.........+..+.++.+.+.+.... . .-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 34899999999753 244444333322 27788888863 222111000011244555555665555421 1 3599
Q ss_pred EEEechhHHHHHHHHHhCcc-ccceeeeecccc
Q 021184 97 LVGHDWGALIAWYFCLLRPD-RVKALVNLSVVF 128 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~p~-~v~~~il~~~~~ 128 (316)
++|+|.||.++-.++.+.|+ .|+.+|.++++-
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 99999999999999999875 699999999864
No 187
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.03 E-value=0.00051 Score=55.10 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=31.3
Q ss_pred eEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 94 QVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
|++++|+|.||++|...|.-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 889999999999999999999999998886665443
No 188
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.98 E-value=0.0011 Score=49.47 Aligned_cols=90 Identities=21% Similarity=0.265 Sum_probs=56.5
Q ss_pred eEEEEccCC--C-ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh----Cc--
Q 021184 26 AVLFLHGFP--E-LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVG----DLVGLLDEF----GI-- 92 (316)
Q Consensus 26 ~vv~~hG~~--~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~----~~~~~~~~~----~~-- 92 (316)
+|=|+-|.. . ..-.|+.+.+.|+++||.|++.-+.- ..+-...++ .....++.+ +.
T Consensus 19 vihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~ 87 (250)
T PF07082_consen 19 VIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-----------TFDHQAIAREVWERFERCLRALQKRGGLDP 87 (250)
T ss_pred EEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-----------CCcHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 455555542 2 22478999999999999999987642 112222222 222222222 21
Q ss_pred --ceEEEEEechhHHHHHHHHHhCccccceeeeecc
Q 021184 93 --EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 93 --~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
-+++-+|||+||.+-+.+...++..-++-|+++-
T Consensus 88 ~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 88 AYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred ccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 2678899999999888888877655566676664
No 189
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.95 E-value=0.00014 Score=54.91 Aligned_cols=103 Identities=8% Similarity=0.016 Sum_probs=75.4
Q ss_pred CCeEEEEccCCCChh-hHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEech
Q 021184 24 GPAVLFLHGFPELWY-SWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
.|.|+++-.+.++.. ..+..++.|... ..|+.-|+-.--.-+... ..++++++++-+.+.++.+|.+ +++++.|.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~~~--G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPLEA--GHFDLDDYIDYVIEMINFLGPD-AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeeccc--CCccHHHHHHHHHHHHHHhCCC-CcEEEEec
Confidence 457777777766654 567778888886 789999986433333223 5779999999999999999965 88888888
Q ss_pred hHHHHH-----HHHHhCccccceeeeecccccC
Q 021184 103 GALIAW-----YFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 103 Gg~~a~-----~~a~~~p~~v~~~il~~~~~~~ 130 (316)
-+.-.+ ..+...|....++++++++...
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 764433 3333466678899999998764
No 190
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.94 E-value=7.4e-05 Score=59.49 Aligned_cols=105 Identities=17% Similarity=0.152 Sum_probs=70.2
Q ss_pred CCeEEEEccCCCChhhH-------HHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEE
Q 021184 24 GPAVLFLHGFPELWYSW-------RKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVF 96 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (316)
.|+||++||+|-.-... ..+...|. ...++.+|+.-... ..........+.+.++-...+++..|.++|+
T Consensus 122 DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~-~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~ 198 (374)
T PF10340_consen 122 DPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSS-DEHGHKYPTQLRQLVATYDYLVESEGNKNII 198 (374)
T ss_pred CcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEecccccc-ccCCCcCchHHHHHHHHHHHHHhccCCCeEE
Confidence 68999999987433222 22233343 35888888754320 0001112345777777788888777889999
Q ss_pred EEEechhHHHHHHHHHhC--cc---ccceeeeecccccCC
Q 021184 97 LVGHDWGALIAWYFCLLR--PD---RVKALVNLSVVFRSR 131 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~~--p~---~v~~~il~~~~~~~~ 131 (316)
++|-|.||.+++.+...- ++ ..+++|+++|.....
T Consensus 199 LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 199 LMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred EEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 999999999999776532 11 267999999987654
No 191
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.90 E-value=0.00028 Score=59.22 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=79.6
Q ss_pred eCCeeEEEEe--------cCCCCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCCC--C----CCCCC
Q 021184 11 TNGINMHVAS--------IGTGPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDAP--P----SITSY 74 (316)
Q Consensus 11 ~~g~~i~~~~--------~g~~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~--~----~~~~~ 74 (316)
.||..+.... .|+.|.+|..+|.-+-+- .|..--..|.+.|+.....|.||=|.-... . .....
T Consensus 449 kDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN 528 (712)
T KOG2237|consen 449 KDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQN 528 (712)
T ss_pred CCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcc
Confidence 3787664322 134677777776543221 343333446668988888899996653221 1 11334
Q ss_pred CHHHHHHHHHHHHHH--hCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 75 TALHVVGDLVGLLDE--FGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+++|+......+++. ...++..+.|.|-||.++..++..+|+.+.++|+-.|...
T Consensus 529 ~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 529 SFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred cHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 677777666666654 2445899999999999999999999999999998777654
No 192
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.80 E-value=9.6e-05 Score=63.96 Aligned_cols=119 Identities=17% Similarity=0.102 Sum_probs=65.4
Q ss_pred CCeeEEEEecC------CCCeEEEEccCCC---Chh-hHHHHHHHHhhCCceEEecCCC----CCCCCCCCCCC-CCCCH
Q 021184 12 NGINMHVASIG------TGPAVLFLHGFPE---LWY-SWRKQLLYLSSRGYRAIAPDLR----GYGDTDAPPSI-TSYTA 76 (316)
Q Consensus 12 ~g~~i~~~~~g------~~~~vv~~hG~~~---~~~-~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~-~~~~~ 76 (316)
|=..+.++... +-|++|++||.+. +.. ....-...++++++-|+++++| |+-.+...... ..+.+
T Consensus 107 DCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl 186 (535)
T PF00135_consen 107 DCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGL 186 (535)
T ss_dssp ---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHH
T ss_pred hHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhh
Confidence 44455555432 1389999999753 221 1222234455668999999998 33222222111 34556
Q ss_pred HHHHHHHHHHHH---HhCc--ceEEEEEechhHHHHHHHHHhC--ccccceeeeecccccC
Q 021184 77 LHVVGDLVGLLD---EFGI--EQVFLVGHDWGALIAWYFCLLR--PDRVKALVNLSVVFRS 130 (316)
Q Consensus 77 ~~~~~~~~~~~~---~~~~--~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~il~~~~~~~ 130 (316)
.|+...+.-+-+ ..|. ++|.|+|+|-||..+...+..- ...++++|+.++....
T Consensus 187 ~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~~ 247 (535)
T PF00135_consen 187 LDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSALS 247 (535)
T ss_dssp HHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TTS
T ss_pred hhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccccc
Confidence 666655554444 4454 4799999999998877766652 2469999999986543
No 193
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.78 E-value=9.6e-05 Score=61.91 Aligned_cols=90 Identities=18% Similarity=0.220 Sum_probs=56.3
Q ss_pred hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CcceEEEEEechhHHHHHHHHHh
Q 021184 38 YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF----GIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..|..+++.|.+.||. --|+.|-...-+........-+++...+..+++.. +.++++|+||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 3678999999999986 33433322211111001112344545555555543 35799999999999999998763
Q ss_pred Cc---------------cccceeeeeccccc
Q 021184 114 RP---------------DRVKALVNLSVVFR 129 (316)
Q Consensus 114 ~p---------------~~v~~~il~~~~~~ 129 (316)
-. ..|++.|.++++..
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccC
Confidence 21 24889999998654
No 194
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.70 E-value=0.00058 Score=49.12 Aligned_cols=105 Identities=17% Similarity=0.230 Sum_probs=64.9
Q ss_pred CCeEEEEccCCCCh-hhHH---------------HHHHHHhhCCceEEecCCC---CCCCCCCCCCCCCCCHHHHHH-HH
Q 021184 24 GPAVLFLHGFPELW-YSWR---------------KQLLYLSSRGYRAIAPDLR---GYGDTDAPPSITSYTALHVVG-DL 83 (316)
Q Consensus 24 ~~~vv~~hG~~~~~-~~~~---------------~~~~~l~~~g~~v~~~d~~---G~G~s~~~~~~~~~~~~~~~~-~~ 83 (316)
.+.+|++||.|--. ..|. ++++.-.+.||.|+..+.- -+-.+...+.....+..+.+. -.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 45899999987422 2342 3455556679999988742 122221111111113333332 23
Q ss_pred HHHHHHhCcceEEEEEechhHHHHHHHHHhCcc--ccceeeeecccc
Q 021184 84 VGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD--RVKALVNLSVVF 128 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~ 128 (316)
..++.-...+.+.++.||.||...+.+..++|+ +|.++.+-+.+.
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 334444566789999999999999999999885 677777776653
No 195
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.70 E-value=5.4e-05 Score=61.20 Aligned_cols=84 Identities=21% Similarity=0.328 Sum_probs=57.7
Q ss_pred hhHHHHHHHHhhCCce------EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCcceEEEEEechhHHHH
Q 021184 38 YSWRKQLLYLSSRGYR------AIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD----EFGIEQVFLVGHDWGALIA 107 (316)
Q Consensus 38 ~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~a 107 (316)
..|..+++.|..-||. -..+|+|= |.... ...+++...+...++ .-|.+|++|++|||||.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~~~----e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYHNS----EERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccCCh----hHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHH
Confidence 4688889999888876 44668773 21111 123344444444444 3466899999999999999
Q ss_pred HHHHHhCcc--------ccceeeeecccc
Q 021184 108 WYFCLLRPD--------RVKALVNLSVVF 128 (316)
Q Consensus 108 ~~~a~~~p~--------~v~~~il~~~~~ 128 (316)
+.+...+++ .|++++.++++.
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCchh
Confidence 999988776 477888777654
No 196
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=97.67 E-value=0.0046 Score=51.01 Aligned_cols=108 Identities=19% Similarity=0.114 Sum_probs=72.7
Q ss_pred CCeEEEEccCCCChhhHHHHHHH-------------------HhhCCceEEecC-CCCCCCCCCCCCCCCCCHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLY-------------------LSSRGYRAIAPD-LRGYGDTDAPPSITSYTALHVVGDL 83 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d-~~G~G~s~~~~~~~~~~~~~~~~~~ 83 (316)
.|.++++.|.+|++..+-.+.+. +... -.++.+| .-|.|.|....+....+.....+|+
T Consensus 101 rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~ 179 (498)
T COG2939 101 RPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDV 179 (498)
T ss_pred CceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccchhH
Confidence 68999999999998877655320 1111 3688899 6699999863332444555555566
Q ss_pred HHHHHHh-------Cc--ceEEEEEechhHHHHHHHHHhCcc---ccceeeeecccccCCC
Q 021184 84 VGLLDEF-------GI--EQVFLVGHDWGALIAWYFCLLRPD---RVKALVNLSVVFRSRN 132 (316)
Q Consensus 84 ~~~~~~~-------~~--~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~ 132 (316)
..+.+.+ .. .+.+|+|-|.||.-+..+|..--+ ..++++++.+......
T Consensus 180 ~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 180 YSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred HHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 5555432 22 489999999999988888876444 3677777777655433
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.66 E-value=0.00015 Score=51.23 Aligned_cols=53 Identities=15% Similarity=0.105 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHh----CcceEEEEEechhHHHHHHHHHhCcc----ccceeeeecccccC
Q 021184 78 HVVGDLVGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPD----RVKALVNLSVVFRS 130 (316)
Q Consensus 78 ~~~~~~~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~----~v~~~il~~~~~~~ 130 (316)
.+...+...++.. ...+++++|||+||.+|..++..... ....++.++++...
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 3344444444443 45689999999999999999988754 46667777765543
No 198
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.66 E-value=0.00039 Score=53.21 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=32.8
Q ss_pred eEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 94 QVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.-+|+|.|+||.+++..+..+|+.+..++..+|...
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 568999999999999999999999999999988664
No 199
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.66 E-value=0.00045 Score=54.04 Aligned_cols=59 Identities=14% Similarity=0.254 Sum_probs=45.2
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccccchHHHHHHHHHHHh
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIK 314 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 314 (316)
++..|-.++.|+.|.+.++..+.-++ ..+|+.+.+..+|+..|...-. .+.+.+..|++
T Consensus 327 RLalpKyivnaSgDdff~pDsa~lYy------d~LPG~kaLrmvPN~~H~~~n~---~i~esl~~fln 385 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANLYY------DDLPGEKALRMVPNDPHNLINQ---FIKESLEPFLN 385 (507)
T ss_pred hccccceeecccCCcccCCCccceee------ccCCCceeeeeCCCCcchhhHH---HHHHHHHHHHH
Confidence 78999999999999999998877644 7889987899999999986432 33344444443
No 200
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=97.60 E-value=0.00014 Score=47.53 Aligned_cols=43 Identities=21% Similarity=0.546 Sum_probs=29.1
Q ss_pred CCCccceEEeeCCeeEEEEecCC----CCeEEEEccCCCChhhHHHH
Q 021184 1 MEKIKHTTVATNGINMHVASIGT----GPAVLFLHGFPELWYSWRKQ 43 (316)
Q Consensus 1 m~~~~~~~~~~~g~~i~~~~~g~----~~~vv~~hG~~~~~~~~~~~ 43 (316)
+|+..+..++++|..|++....+ ..||||+|||++|-..|..+
T Consensus 65 lN~~phf~t~I~g~~iHFih~rs~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 65 LNSFPHFKTEIDGLDIHFIHVRSKRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp HTTS-EEEEEETTEEEEEEEE--S-TT-EEEEEE--SS--GGGGHHH
T ss_pred HHcCCCeeEEEeeEEEEEEEeeCCCCCCeEEEEECCCCccHHhHHhh
Confidence 36778889999999999876542 34999999999998877654
No 201
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.57 E-value=0.00073 Score=55.22 Aligned_cols=110 Identities=16% Similarity=0.249 Sum_probs=81.7
Q ss_pred CCCeEEEEccCCCChhhHH-----HHHHHHhhCCceEEecCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCc
Q 021184 23 TGPAVLFLHGFPELWYSWR-----KQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----ITSYTALHVVGDLVGLLDEFGI 92 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
.+|..|+|-|=+.-...|. .+...-.+.|-.|+..++|-+|.|.+..+ ....+..+...|+.++++++..
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~ 164 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNA 164 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHh
Confidence 3788888887654443331 22223334478999999999998855432 2345788889999999988732
Q ss_pred -------ceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCC
Q 021184 93 -------EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRN 132 (316)
Q Consensus 93 -------~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~ 132 (316)
.|.+.+|.|.-|.++..+=.++|+.+.|.|.-+++.....
T Consensus 165 k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A~~ 211 (514)
T KOG2182|consen 165 KFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLAKV 211 (514)
T ss_pred hcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeEEe
Confidence 2789999999999999999999999999988887765433
No 202
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.57 E-value=0.00025 Score=49.25 Aligned_cols=37 Identities=16% Similarity=0.284 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 78 HVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+..+.+.++++.....++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhh
Confidence 4445555655555556899999999999999888864
No 203
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.35 E-value=0.0044 Score=46.49 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=36.1
Q ss_pred HHHHHHHHHhCcceEEEEEechhHHHHHHHHHhC----ccccceeeeecccccC
Q 021184 81 GDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLR----PDRVKALVNLSVVFRS 130 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~----p~~v~~~il~~~~~~~ 130 (316)
+-+..+++..+ .++++.|||.||.+|..+|... .++|.++...+++...
T Consensus 73 ~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 73 AYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 34444444444 3699999999999999999874 3478898888886544
No 204
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.27 E-value=0.011 Score=40.74 Aligned_cols=82 Identities=10% Similarity=0.054 Sum_probs=54.5
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCc-eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGY-RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGA 104 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
.||+.-||+..+..+..++ +.+ .+ -++++|++..... .++. ..+.+-+|++|||-
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpe-N~dl~lcYDY~dl~ld--------fDfs-------------Ay~hirlvAwSMGV 68 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPE-NHDLLLCYDYQDLNLD--------FDFS-------------AYRHIRLVAWSMGV 68 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCC-CCcEEEEeehhhcCcc--------cchh-------------hhhhhhhhhhhHHH
Confidence 7888889988877665443 223 34 5678888743221 1111 12456799999999
Q ss_pred HHHHHHHHhCccccceeeeecccccCCCC
Q 021184 105 LIAWYFCLLRPDRVKALVNLSVVFRSRNP 133 (316)
Q Consensus 105 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~ 133 (316)
.+|-++....+ +++.+.+++...+.+.
T Consensus 69 wvAeR~lqg~~--lksatAiNGTgLpcDd 95 (214)
T COG2830 69 WVAERVLQGIR--LKSATAINGTGLPCDD 95 (214)
T ss_pred HHHHHHHhhcc--ccceeeecCCCCCccc
Confidence 99999988775 7788888876655443
No 205
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.10 E-value=0.0011 Score=50.02 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=35.7
Q ss_pred CcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
+.++..++|||+||.+++.....+|+.+...++++|...-
T Consensus 135 ~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 135 NSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred CcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 4457899999999999999999999999999999997654
No 206
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.09 E-value=0.019 Score=45.72 Aligned_cols=65 Identities=9% Similarity=0.134 Sum_probs=50.5
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCcccccc-chHHHHHHHHHHHhh
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQE-KADEVSSHIYDFIKQ 315 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~~ 315 (316)
...+.+.+.+..|.++|....+++.. ...+..-++ +-+.+.++-|..+.. .|..+.+...+|+++
T Consensus 224 ~~~~~ly~~s~~d~v~~~~~ie~f~~--~~~~~g~~v-~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPADEIEKFIA--LRREKGVNV-KSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred ccccceeecCCccccccHHHHHHHHH--HHHhcCceE-EEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 36788899999999999988888642 223334445 677788889999764 799999999999975
No 207
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.96 E-value=0.0019 Score=49.10 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=20.2
Q ss_pred CcceEEEEEechhHHHHHHHHHhC
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
...++++.|||+||.+|..++...
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHH
Confidence 345899999999999999888763
No 208
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.93 E-value=0.013 Score=42.07 Aligned_cols=54 Identities=20% Similarity=0.154 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHhC-----cceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 76 ALHVVGDLVGLLDEFG-----IEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~-----~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
-+.-+.++..+++.+. ..++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 3445556666666552 23689999999999999988886778999999987654
No 209
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.93 E-value=0.0017 Score=45.08 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=68.2
Q ss_pred CeeEEEEecCC-CCeEEEEccCCCChhhHHHH--HHHHh---hCC-ceEEecCCCCCCCCCCCCCCCCCCHHHHHHH---
Q 021184 13 GINMHVASIGT-GPAVLFLHGFPELWYSWRKQ--LLYLS---SRG-YRAIAPDLRGYGDTDAPPSITSYTALHVVGD--- 82 (316)
Q Consensus 13 g~~i~~~~~g~-~~~vv~~hG~~~~~~~~~~~--~~~l~---~~g-~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~--- 82 (316)
+..+.+...|. |-+||+.+..++....|..+ +..|+ +.| ...++++ |....+.-. ...+..+.++-
T Consensus 14 ~RdMel~ryGHaG~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a--~h~~~adr~~rH~A 89 (227)
T COG4947 14 NRDMELNRYGHAGIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLA--THKNAADRAERHRA 89 (227)
T ss_pred cchhhhhhccCCCCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhh--hcCCHHHHHHHHHH
Confidence 34556666776 66788888777776666432 33332 334 3555555 222111111 11223333322
Q ss_pred HH-HHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccC
Q 021184 83 LV-GLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 83 ~~-~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.. -+++..-..+.++-|.||||..|..+.-++|+.+.++|.+++.+..
T Consensus 90 yerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYda 138 (227)
T COG4947 90 YERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeH
Confidence 22 2233322235678899999999999999999999999999997754
No 210
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.83 E-value=0.003 Score=46.21 Aligned_cols=70 Identities=13% Similarity=0.046 Sum_probs=45.9
Q ss_pred HHHHhhCCceEEecCCCCCCCCCCC-C------CCCCCCHHHHHHHHHHHHHHhC-cceEEEEEechhHHHHHHHHHhC
Q 021184 44 LLYLSSRGYRAIAPDLRGYGDTDAP-P------SITSYTALHVVGDLVGLLDEFG-IEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~~-~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+..|... .+|+++=+|-....... . ........|..+.+...+++.+ .++++|+|||.|+.++.++...+
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3455555 68888887754322111 0 0012345666667777777764 45899999999999999999875
No 211
>PLN02162 triacylglycerol lipase
Probab=96.83 E-value=0.0038 Score=51.23 Aligned_cols=36 Identities=22% Similarity=0.179 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHH
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
.++.+.+.+++......++++.|||+||.+|..+|+
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 344455556665555568999999999999998765
No 212
>PLN00413 triacylglycerol lipase
Probab=96.81 E-value=0.0042 Score=51.13 Aligned_cols=36 Identities=22% Similarity=0.410 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHH
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
.++.+.+.++++.....++++.|||+||.+|..+|.
T Consensus 268 y~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 268 YTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 355667777777766668999999999999998875
No 213
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.71 E-value=0.0053 Score=44.43 Aligned_cols=74 Identities=18% Similarity=0.120 Sum_probs=42.5
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HhCcceEEEEEechhHHHHHHHHHh------Ccccccee
Q 021184 52 YRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD----EFGIEQVFLVGHDWGALIAWYFCLL------RPDRVKAL 121 (316)
Q Consensus 52 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~G~S~Gg~~a~~~a~~------~p~~v~~~ 121 (316)
..+..+++|-..... . ...+...=+.++...++ .-...+++++|+|+|+.++..++.. ..++|.++
T Consensus 40 ~~~~~V~YpA~~~~~--~--y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~av 115 (179)
T PF01083_consen 40 VAVQGVEYPASLGPN--S--YGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAV 115 (179)
T ss_dssp EEEEE--S---SCGG--S--CHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEE
T ss_pred eEEEecCCCCCCCcc--c--ccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEE
Confidence 556666666322111 0 11233333444444443 3344589999999999999999877 23578899
Q ss_pred eeeccccc
Q 021184 122 VNLSVVFR 129 (316)
Q Consensus 122 il~~~~~~ 129 (316)
++++-+..
T Consensus 116 vlfGdP~~ 123 (179)
T PF01083_consen 116 VLFGDPRR 123 (179)
T ss_dssp EEES-TTT
T ss_pred EEecCCcc
Confidence 98886554
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.63 E-value=0.0052 Score=49.36 Aligned_cols=105 Identities=19% Similarity=0.247 Sum_probs=78.5
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhC---cceEEEEE
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI-TSYTALHVVGDLVGLLDEFG---IEQVFLVG 99 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~l~G 99 (316)
.|+|+..-|++.+......--..|.. -+-+.+++|-+|.|.+.+.. ...++++.+.|.+++++.++ ..+.+--|
T Consensus 63 rPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG 140 (448)
T PF05576_consen 63 RPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTG 140 (448)
T ss_pred CCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecC
Confidence 57777777877654323222223333 47788999999999776532 34589999999999998873 24788999
Q ss_pred echhHHHHHHHHHhCccccceeeeecccccC
Q 021184 100 HDWGALIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 100 ~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
.|-||+.++.+=.-||+-|++.|.-..+...
T Consensus 141 ~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 141 GSKGGMTAVYYRRFYPDDVDGTVAYVAPNDV 171 (448)
T ss_pred cCCCceeEEEEeeeCCCCCCeeeeeeccccc
Confidence 9999999999999999999999987666543
No 215
>PLN02571 triacylglycerol lipase
Probab=96.47 E-value=0.0053 Score=49.94 Aligned_cols=37 Identities=22% Similarity=0.339 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHhCcc--eEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFGIE--QVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++..++..+++....+ ++++.|||+||.+|...|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45667777777665433 68999999999999988875
No 216
>PLN02454 triacylglycerol lipase
Probab=96.47 E-value=0.0058 Score=49.66 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCcc--eEEEEEechhHHHHHHHHHh
Q 021184 79 VVGDLVGLLDEFGIE--QVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+...+.++++..... +|++.|||+||.+|..+|..
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 334444555444333 49999999999999998865
No 217
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.42 E-value=0.0043 Score=49.68 Aligned_cols=88 Identities=18% Similarity=0.275 Sum_probs=48.8
Q ss_pred CCeEEEEccCCC-ChhhHHHHHHHHhhCCceEEecCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 24 GPAVLFLHGFPE-LWYSWRKQLLYLSSRGYRAIAPDLRGY-GDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 24 ~~~vv~~hG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
+-.||+.||+.+ +...|...+...... +.=..+..+|+ +......+.-.+=-...++++.+.+....++++..+|||
T Consensus 80 ~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghS 158 (405)
T KOG4372|consen 80 KHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHS 158 (405)
T ss_pred ceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeee
Confidence 348999999987 566676666666554 22213333332 222222211111112233444444444457899999999
Q ss_pred hhHHHHHHHHH
Q 021184 102 WGALIAWYFCL 112 (316)
Q Consensus 102 ~Gg~~a~~~a~ 112 (316)
+||.++-.+..
T Consensus 159 LGGLvar~AIg 169 (405)
T KOG4372|consen 159 LGGLVARYAIG 169 (405)
T ss_pred cCCeeeeEEEE
Confidence 99988764433
No 218
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.39 E-value=0.017 Score=50.35 Aligned_cols=106 Identities=18% Similarity=0.185 Sum_probs=62.1
Q ss_pred CCeEEEEccCCCCh---hhHH--HHHHHHhhCCceEEecCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C
Q 021184 24 GPAVLFLHGFPELW---YSWR--KQLLYLSSRGYRAIAPDLR----GYGDTDAPPSITSYTALHVVGDLVGLLDEF---G 91 (316)
Q Consensus 24 ~~~vv~~hG~~~~~---~~~~--~~~~~l~~~g~~v~~~d~~----G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~---~ 91 (316)
-|++|++||.+-.. ..+. .....+..+..-|+++.+| |+...........+.+.|++..+.-+-+++ |
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 48999999986322 2221 1122333335778888876 222222111124556666666555554443 3
Q ss_pred --cceEEEEEechhHHHHHHHHHhC--ccccceeeeeccccc
Q 021184 92 --IEQVFLVGHDWGALIAWYFCLLR--PDRVKALVNLSVVFR 129 (316)
Q Consensus 92 --~~~~~l~G~S~Gg~~a~~~a~~~--p~~v~~~il~~~~~~ 129 (316)
.++|.++|||.||..+..+...- ...+..+|..++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 45899999999999887666532 235667777776544
No 219
>PLN02408 phospholipase A1
Probab=96.19 E-value=0.0095 Score=47.78 Aligned_cols=37 Identities=27% Similarity=0.370 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCcc--eEEEEEechhHHHHHHHHHhC
Q 021184 78 HVVGDLVGLLDEFGIE--QVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
++.+.+..+++....+ +|++.|||+||.+|..+|...
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl 221 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDI 221 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHH
Confidence 3445666666655433 589999999999999888764
No 220
>PLN02310 triacylglycerol lipase
Probab=96.15 E-value=0.017 Score=46.98 Aligned_cols=37 Identities=16% Similarity=0.243 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhC---c-ceEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFG---I-EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~---~-~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++.+.+..+++... . .++.+.|||+||.+|...|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445566777776552 1 379999999999999988754
No 221
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=96.05 E-value=0.0074 Score=43.24 Aligned_cols=65 Identities=17% Similarity=0.184 Sum_probs=50.5
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCc-eEEEEEcCCCcccccc---chHHHHHHHHHHHhhC
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGL-QEVIVMEGVAHFINQE---KADEVSSHIYDFIKQF 316 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~gH~~~~~---~~~~~~~~i~~fl~~~ 316 (316)
++++|-|-|+.|.++.+..+.... .|...+|.. +..++.+|+||+..+. ..+++...|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~---~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAH---DLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHH---HHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 677788999999999987766643 366667664 4667889999998664 3578999999999875
No 222
>PLN02934 triacylglycerol lipase
Probab=95.99 E-value=0.014 Score=48.63 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHH
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
.+....+.++++.....++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345566677777666568999999999999998875
No 223
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.99 E-value=0.044 Score=50.39 Aligned_cols=95 Identities=15% Similarity=0.149 Sum_probs=67.8
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc-eEEEEEec
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE-QVFLVGHD 101 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 101 (316)
++|++.|+|..-+....+..++..|. .|-+|.-....- ...++++.++-..+-++.+... +..++|+|
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~v-P~dSies~A~~yirqirkvQP~GPYrl~GYS 2190 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAV-PLDSIESLAAYYIRQIRKVQPEGPYRLAGYS 2190 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccC-CcchHHHHHHHHHHHHHhcCCCCCeeeeccc
Confidence 47999999999888777776666553 233443322111 3457888888877777777554 88999999
Q ss_pred hhHHHHHHHHHhCc--cccceeeeecccc
Q 021184 102 WGALIAWYFCLLRP--DRVKALVNLSVVF 128 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p--~~v~~~il~~~~~ 128 (316)
+|+.++..+|..-. +....+|++++.+
T Consensus 2191 yG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2191 YGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 99999999987543 3456689988865
No 224
>PLN02324 triacylglycerol lipase
Probab=95.81 E-value=0.017 Score=46.97 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHhCc--ceEEEEEechhHHHHHHHHHh
Q 021184 78 HVVGDLVGLLDEFGI--EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
++...+.++++.... .+|++.|||+||.+|...|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 344566666665543 269999999999999988864
No 225
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.67 E-value=0.037 Score=44.31 Aligned_cols=40 Identities=33% Similarity=0.443 Sum_probs=31.6
Q ss_pred CcceEEEEEechhHHHHHHHHHhCcc-----ccceeeeecccccC
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRPD-----RVKALVNLSVVFRS 130 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~-----~v~~~il~~~~~~~ 130 (316)
+.+|+.++|||+|+.+...++..-.+ .|+.+++++++...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 66789999999999998877765443 38899999876644
No 226
>PLN02802 triacylglycerol lipase
Probab=95.63 E-value=0.023 Score=47.37 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCc--ceEEEEEechhHHHHHHHHHhC
Q 021184 78 HVVGDLVGLLDEFGI--EQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~--~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
++.+.+.++++.... .+|++.|||+||.+|...|...
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 445566666665432 2689999999999999887753
No 227
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.54 E-value=0.073 Score=45.15 Aligned_cols=67 Identities=10% Similarity=0.139 Sum_probs=51.1
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCC-------CceEEEEEcCCCccccc--cchHHHHHHHHHHHhh
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVP-------GLQEVIVMEGVAHFINQ--EKADEVSSHIYDFIKQ 315 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~gH~~~~--~~~~~~~~~i~~fl~~ 315 (316)
+-.-.+++.||..|.++|+..+..+|+. +.+... +-.++..+||.+|..-- ..+-.....|.+|+++
T Consensus 351 ~~GGKLI~~HG~aD~~I~p~~ti~YY~~--V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 351 ARGGKLILYHGWADPLIPPQGTIDYYER--VVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred hcCCeEEEEecCCCCccCCCcHHHHHHH--HHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 3467899999999999999999999863 333322 22488999999998743 3555788899999875
No 228
>PLN02753 triacylglycerol lipase
Probab=95.51 E-value=0.028 Score=47.13 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHhCc-----ceEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFGI-----EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++...+..+++.... .+|.+.|||+||.+|...|..
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHH
Confidence 3445566666665432 379999999999999988864
No 229
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.46 E-value=0.029 Score=46.96 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhC---c-ceEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFG---I-EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~---~-~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
++..+++..+++... . .++.+.|||+||.+|...|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345567777776553 1 369999999999999988864
No 230
>PLN02719 triacylglycerol lipase
Probab=95.28 E-value=0.036 Score=46.32 Aligned_cols=37 Identities=19% Similarity=0.324 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhCc-----ceEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFGI-----EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++...+..+++.... .+|.+.|||+||.+|..+|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3445566666655431 279999999999999988864
No 231
>PLN02761 lipase class 3 family protein
Probab=95.27 E-value=0.036 Score=46.41 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhC-----c-ceEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFG-----I-EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~-----~-~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+++...+..+++... . -+|.+.|||+||.+|...|..
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 345566667666552 1 269999999999999988753
No 232
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.02 E-value=0.052 Score=31.38 Aligned_cols=34 Identities=26% Similarity=0.538 Sum_probs=19.1
Q ss_pred eEEeeCCeeEEEEec--C--------CCCeEEEEccCCCChhhH
Q 021184 7 TTVATNGINMHVASI--G--------TGPAVLFLHGFPELWYSW 40 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~--g--------~~~~vv~~hG~~~~~~~~ 40 (316)
..++.||.-+....- + .+|+|++.||+.+++..|
T Consensus 16 ~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 16 EVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp EEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred EEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 445558887765432 1 267999999999999887
No 233
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.77 E-value=0.06 Score=43.42 Aligned_cols=37 Identities=19% Similarity=0.284 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHh
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..+.+++..+++....-++.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677778888887776689999999999999988875
No 234
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=94.58 E-value=0.73 Score=29.62 Aligned_cols=85 Identities=19% Similarity=0.166 Sum_probs=57.7
Q ss_pred hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhH--HHHHHHHHhCc
Q 021184 38 YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGA--LIAWYFCLLRP 115 (316)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~~p 115 (316)
..|..+.+.+..+|+..=.+.++..|.+....-... ..+.-...+..+++.....++++||-|--. -+-..+|.++|
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~-~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSG-AEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCC-chhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCC
Confidence 345556666767788777777777765533221011 113455678888888888899999988766 44556788999
Q ss_pred cccceeee
Q 021184 116 DRVKALVN 123 (316)
Q Consensus 116 ~~v~~~il 123 (316)
++|.++.+
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99988754
No 235
>PLN02847 triacylglycerol lipase
Probab=94.46 E-value=0.082 Score=45.13 Aligned_cols=21 Identities=24% Similarity=0.338 Sum_probs=18.3
Q ss_pred ceEEEEEechhHHHHHHHHHh
Q 021184 93 EQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 489999999999999987764
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.29 E-value=0.3 Score=36.89 Aligned_cols=64 Identities=19% Similarity=0.121 Sum_probs=38.5
Q ss_pred CceEEecCCCCC-CC-CCCCCCCCCCCHHHHHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhC
Q 021184 51 GYRAIAPDLRGY-GD-TDAPPSITSYTALHVVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 51 g~~v~~~d~~G~-G~-s~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
|+.+..+++|.. +- +.........+..+=++.+.+.+... ..++++++|+|+|+.++...+.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 466667777651 11 00011112335555566666666552 235899999999999999887764
No 237
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.14 E-value=0.14 Score=43.50 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=54.0
Q ss_pred HHHhhCCceEEecCCCCCCCCCC--CCCCCCCCHHH-----------HHHHHHHHHHHh---CcceEEEEEechhHHHHH
Q 021184 45 LYLSSRGYRAIAPDLRGYGDTDA--PPSITSYTALH-----------VVGDLVGLLDEF---GIEQVFLVGHDWGALIAW 108 (316)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~-----------~~~~~~~~~~~~---~~~~~~l~G~S~Gg~~a~ 108 (316)
..+ ..||.+..=|- ||..+.. ... ...+.+. .+.--.++++.. ..+.-+..|.|.||.-++
T Consensus 54 ~~~-~~G~A~~~TD~-Gh~~~~~~~~~~-~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 54 TAL-ARGYATASTDS-GHQGSAGSDDAS-FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred hhh-hcCeEEEEecC-CCCCCccccccc-ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 344 45899999996 5654432 111 1122222 222222333332 334678999999999999
Q ss_pred HHHHhCccccceeeeeccccc
Q 021184 109 YFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 109 ~~a~~~p~~v~~~il~~~~~~ 129 (316)
..|.+||+-++|+|.-+|+..
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHhChhhcCeEEeCCchHH
Confidence 999999999999999998764
No 238
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.43 E-value=0.33 Score=37.25 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=25.4
Q ss_pred CcceEEEEEechhHHHHHHHHHhCccccceeeeecc
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
.-.++.+-|||+||.+|..+..++. +..+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4458999999999999999888874 444444444
No 239
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.43 E-value=0.33 Score=37.25 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=25.4
Q ss_pred CcceEEEEEechhHHHHHHHHHhCccccceeeeecc
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
.-.++.+-|||+||.+|..+..++. +..+..-+|
T Consensus 274 pda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 274 PDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred CCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 4458999999999999999888874 444444444
No 240
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=91.34 E-value=3.3 Score=34.14 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=64.4
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC---------------------CCCCHHHHHHHH
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---------------------TSYTALHVVGDL 83 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------------------~~~~~~~~~~~~ 83 (316)
|+|+++--+-.-...+.++.+.+.+.|..++.+|.-=.|......+. ....++.+++.+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 44555544444556788888899999999999997444443322110 001222334444
Q ss_pred HHHHHHh----CcceEEEEEechhHHHHHHHHHhCccccceeeee
Q 021184 84 VGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNL 124 (316)
Q Consensus 84 ~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~ 124 (316)
..++..+ .+.-++-+|.|.|..++.......|=-+-++++-
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 4444444 2346788999999999999999988767776643
No 241
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.78 E-value=9.3 Score=32.39 Aligned_cols=112 Identities=19% Similarity=0.226 Sum_probs=69.1
Q ss_pred EeeCCeeE-EEEecCC--CCeEEEEccCCCChhhHH--HHHHHHhhCCce-EEecCCCCCCCCCCCCCCCCCCHHHHHHH
Q 021184 9 VATNGINM-HVASIGT--GPAVLFLHGFPELWYSWR--KQLLYLSSRGYR-AIAPDLRGYGDTDAPPSITSYTALHVVGD 82 (316)
Q Consensus 9 ~~~~g~~i-~~~~~g~--~~~vv~~hG~~~~~~~~~--~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~ 82 (316)
+...+-.+ +|...|+ .|..|..-|+-. .+.+. .+++.| |.. .+.-|.|=-|.+--.-. ..+ -+.+.+-
T Consensus 271 ~D~~reEi~yYFnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs-~ey-E~~I~~~ 344 (511)
T TIGR03712 271 VDSKRQEFIYYFNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGS-DEY-EQGIINV 344 (511)
T ss_pred ecCCCCeeEEecCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCc-HHH-HHHHHHH
Confidence 33344444 3445565 456778878754 33332 344555 343 44448887776643221 112 3445667
Q ss_pred HHHHHHHhCcc--eEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 83 LVGLLDEFGIE--QVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 83 ~~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
|.+.++.+|.+ .+++-|-|||..-|+.++++.. ..++|+--|..
T Consensus 345 I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 345 IQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred HHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 77888888776 6999999999999999999852 45666555543
No 242
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=90.51 E-value=2.1 Score=36.80 Aligned_cols=99 Identities=17% Similarity=0.069 Sum_probs=57.0
Q ss_pred eEEEEccCCC---ChhhHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC--cceEE
Q 021184 26 AVLFLHGFPE---LWYSWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE---FG--IEQVF 96 (316)
Q Consensus 26 ~vv~~hG~~~---~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~ 96 (316)
.|+-+||.|. ++.+-....+.++. .|..|+.+|+-= .+..+.....++..-...-+++. +| .++|+
T Consensus 398 li~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL-----APEaPFPRaleEv~fAYcW~inn~allG~TgEriv 472 (880)
T KOG4388|consen 398 LIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL-----APEAPFPRALEEVFFAYCWAINNCALLGSTGERIV 472 (880)
T ss_pred EEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc-----CCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEE
Confidence 6778888873 22222222332222 278999999742 22222233455554444444443 33 26999
Q ss_pred EEEechhHHHHHHHHHh----Cccccceeeeeccccc
Q 021184 97 LVGHDWGALIAWYFCLL----RPDRVKALVNLSVVFR 129 (316)
Q Consensus 97 l~G~S~Gg~~a~~~a~~----~p~~v~~~il~~~~~~ 129 (316)
++|-|-||.+++-.|.+ .--..+|+++.-++..
T Consensus 473 ~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl 509 (880)
T KOG4388|consen 473 LAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTL 509 (880)
T ss_pred EeccCCCcceeehhHHHHHHhCCCCCCceEEecChhh
Confidence 99999999876655554 2222468888776644
No 243
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=90.27 E-value=0.76 Score=37.61 Aligned_cols=57 Identities=16% Similarity=0.068 Sum_probs=39.7
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccccc-----cchHHHHHHHHHHH
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQ-----EKADEVSSHIYDFI 313 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~~i~~fl 313 (316)
-.-.+|+|+|++|++...... +.+...+. .+.+.||++|...+ ++.++....|.+|-
T Consensus 350 ~~~rmlFVYG~nDPW~A~~f~--------l~~g~~ds-~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 350 NGPRMLFVYGENDPWSAEPFR--------LGKGKRDS-YVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred CCCeEEEEeCCCCCcccCccc--------cCCCCcce-EEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 355799999999998654322 33444566 78888999998744 34456777777774
No 244
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.05 E-value=0.67 Score=39.67 Aligned_cols=53 Identities=26% Similarity=0.413 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHHHHh--C-cceEEEEEechhHHHHHHHHHh-----Ccc------ccceeeeeccc
Q 021184 75 TALHVVGDLVGLLDEF--G-IEQVFLVGHDWGALIAWYFCLL-----RPD------RVKALVNLSVV 127 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~--~-~~~~~l~G~S~Gg~~a~~~a~~-----~p~------~v~~~il~~~~ 127 (316)
++..-...+.+.+... | .++++.+||||||.++=.+... .|+ ..+|+|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3444444455555444 3 3579999999999887665543 232 35677777765
No 245
>PRK02399 hypothetical protein; Provisional
Probab=89.67 E-value=7.5 Score=32.17 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=60.7
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC---------------------CCCCHHHHHHHH
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---------------------TSYTALHVVGDL 83 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------------------~~~~~~~~~~~~ 83 (316)
+.|+++--+-.-...+.++.+.+.+.|..|+.+|.-..|......+. ....++.+.+..
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 34444433334445677777888888999999998434322111100 001123344444
Q ss_pred HHHHHHh----CcceEEEEEechhHHHHHHHHHhCccccceeee
Q 021184 84 VGLLDEF----GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVN 123 (316)
Q Consensus 84 ~~~~~~~----~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il 123 (316)
..++..+ .+.-++-+|.|.|..++.......|=-+-++++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 4455433 345688899999999999999988876666664
No 246
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=88.71 E-value=4.2 Score=32.22 Aligned_cols=106 Identities=19% Similarity=0.161 Sum_probs=68.8
Q ss_pred CCeEEEEccCCCChhh----HHHHHH----------HHhhCCceEEecCCC-CCCCCCCCCC-CCCCCHHHHHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYS----WRKQLL----------YLSSRGYRAIAPDLR-GYGDTDAPPS-ITSYTALHVVGDLVGLL 87 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~----~~~~~~----------~l~~~g~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~~~~~~ 87 (316)
.|..+.+.|.++.+.. |+.+-+ ...+. -.++.+|-| |.|.|.-.-. ....+..+.+.|+.+++
T Consensus 31 ~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~-adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~ll 109 (414)
T KOG1283|consen 31 RPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD-ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELL 109 (414)
T ss_pred CCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh-ccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHH
Confidence 6889999998775542 222211 11122 456666654 7888754322 12346788899999999
Q ss_pred HHh-------CcceEEEEEechhHHHHHHHHHhCcc---------ccceeeeecccccC
Q 021184 88 DEF-------GIEQVFLVGHDWGALIAWYFCLLRPD---------RVKALVNLSVVFRS 130 (316)
Q Consensus 88 ~~~-------~~~~~~l~G~S~Gg~~a~~~a~~~p~---------~v~~~il~~~~~~~ 130 (316)
+.+ ...|++|+.-|.||-++..++...-+ .+.+++|-++.+.+
T Consensus 110 k~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 110 KGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred HHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 875 33489999999999999888765321 35677776665544
No 247
>PF03283 PAE: Pectinacetylesterase
Probab=86.93 E-value=3.8 Score=33.63 Aligned_cols=40 Identities=28% Similarity=0.159 Sum_probs=26.3
Q ss_pred cceEEEEEechhHHHHHHHHH----hCccccceeeeecccccCC
Q 021184 92 IEQVFLVGHDWGALIAWYFCL----LRPDRVKALVNLSVVFRSR 131 (316)
Q Consensus 92 ~~~~~l~G~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~~~ 131 (316)
.++++|.|.|-||.-++..+- ..|..++-..+.++.....
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d 198 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLD 198 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccccc
Confidence 357999999999988876544 4564444455555555443
No 248
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.27 E-value=1.9 Score=36.37 Aligned_cols=41 Identities=20% Similarity=0.236 Sum_probs=31.6
Q ss_pred hCcceEEEEEechhHHHHHHHHHh-----CccccceeeeecccccC
Q 021184 90 FGIEQVFLVGHDWGALIAWYFCLL-----RPDRVKALVNLSVVFRS 130 (316)
Q Consensus 90 ~~~~~~~l~G~S~Gg~~a~~~a~~-----~p~~v~~~il~~~~~~~ 130 (316)
.|.+|+-++|+|+|+-+....+.. .-+.|..+++++++...
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 477899999999999988866552 22358899999986644
No 249
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=84.97 E-value=8.2 Score=27.88 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=40.2
Q ss_pred CCCCeEEEEccCCCChhh--HHHHHHHHhhCCceEEecCCCC--CCCCCCCCCCCCCCHHHHHHHHHHH
Q 021184 22 GTGPAVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDLRG--YGDTDAPPSITSYTALHVVGDLVGL 86 (316)
Q Consensus 22 g~~~~vv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G--~G~s~~~~~~~~~~~~~~~~~~~~~ 86 (316)
++.+.+|++-|+.++.-+ -..+.+.|.+.|++++.+|-=. ||.+.. -.++-++-.+.+..+
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d----LgFs~edR~eniRRv 84 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD----LGFSREDRIENIRRV 84 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC----CCCChHHHHHHHHHH
Confidence 457899999999887653 3456778899999999999321 343322 344555555554443
No 250
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=83.25 E-value=9.9 Score=29.98 Aligned_cols=89 Identities=18% Similarity=0.185 Sum_probs=47.6
Q ss_pred CeEEEEccCCCChh------hHHHHHHHH-hhCCceEEecCCCCCCCC--------CCCC-----CCCCCCHHHHHHH-H
Q 021184 25 PAVLFLHGFPELWY------SWRKQLLYL-SSRGYRAIAPDLRGYGDT--------DAPP-----SITSYTALHVVGD-L 83 (316)
Q Consensus 25 ~~vv~~hG~~~~~~------~~~~~~~~l-~~~g~~v~~~d~~G~G~s--------~~~~-----~~~~~~~~~~~~~-~ 83 (316)
..|||+=|.+.+.. ....+.+.+ ...+-..+.+=.+|-|.. .... ......+++-+.+ .
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 35777878765433 223445555 223334444555666661 1100 0011233333333 3
Q ss_pred HHHHHHh-CcceEEEEEechhHHHHHHHHHh
Q 021184 84 VGLLDEF-GIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 84 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..+.+.. ..++|.++|+|-|+..|-.+|..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3333443 33579999999999999988864
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=82.61 E-value=9.1 Score=28.51 Aligned_cols=71 Identities=17% Similarity=0.210 Sum_probs=48.1
Q ss_pred HHHHhhCCc-eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEech----hHHHHHHHHHhCc-cc
Q 021184 44 LLYLSSRGY-RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDW----GALIAWYFCLLRP-DR 117 (316)
Q Consensus 44 ~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~----Gg~~a~~~a~~~p-~~ 117 (316)
.+.+...|. .|+..|.+.. ..++.+.+++.+.++++..+ -.++++|+|. |..++-++|++.. ..
T Consensus 69 ~~~l~~~G~d~V~~~~~~~~---------~~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~l 138 (202)
T cd01714 69 LREALAMGADRAILVSDRAF---------AGADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQ 138 (202)
T ss_pred HHHHHHcCCCEEEEEecccc---------cCCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCc
Confidence 334444555 5666654421 35678889999999998877 5789999998 8889998888743 23
Q ss_pred cceeeee
Q 021184 118 VKALVNL 124 (316)
Q Consensus 118 v~~~il~ 124 (316)
+..++-+
T Consensus 139 vsdv~~l 145 (202)
T cd01714 139 ITYVSKI 145 (202)
T ss_pred cceEEEE
Confidence 4444433
No 252
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=81.48 E-value=6.8 Score=30.50 Aligned_cols=71 Identities=20% Similarity=0.284 Sum_probs=45.0
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCC--------CCCCC---CCCC--CCCCCHHHHHHHHHHHHHHh
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG--------YGDTD---APPS--ITSYTALHVVGDLVGLLDEF 90 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--------~G~s~---~~~~--~~~~~~~~~~~~~~~~~~~~ 90 (316)
-|-|+|.-|.++. .+.|+..||.|+..|+-= .|..- ++-+ .-.-+.+.+.+-+.+.++..
T Consensus 252 vPmi~fakG~g~~-------Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 252 VPMILFAKGSGGA-------LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred CceEEEEcCcchH-------HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 3778888887653 678889999999999721 12110 0111 01235667777888888888
Q ss_pred CcceE-EEEEec
Q 021184 91 GIEQV-FLVGHD 101 (316)
Q Consensus 91 ~~~~~-~l~G~S 101 (316)
|.++. .=+||.
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 86654 336664
No 253
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=81.13 E-value=1.7 Score=35.07 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=25.0
Q ss_pred HHHHHHHHhCcceEEEEEechhHHHHHHHHHh
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.+.++++..|+++-.++|||+|=+.|+.++..
T Consensus 73 al~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG~ 104 (318)
T PF00698_consen 73 ALARLLRSWGIKPDAVIGHSLGEYAALVAAGA 104 (318)
T ss_dssp HHHHHHHHTTHCESEEEESTTHHHHHHHHTTS
T ss_pred hhhhhhcccccccceeeccchhhHHHHHHCCc
Confidence 34456677788999999999999888866543
No 254
>COG3933 Transcriptional antiterminator [Transcription]
Probab=79.70 E-value=16 Score=30.65 Aligned_cols=74 Identities=20% Similarity=0.158 Sum_probs=58.1
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechh
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWG 103 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
-.+||+.||... +.+...++..|... --+.++|+| -+.++.+..+.+.+.+++.+..+=+++=..||
T Consensus 109 v~vIiiAHG~sT-ASSmaevanrLL~~-~~~~aiDMP-----------Ldvsp~~vle~l~e~~k~~~~~~GlllLVDMG 175 (470)
T COG3933 109 VKVIIIAHGYST-ASSMAEVANRLLGE-EIFIAIDMP-----------LDVSPSDVLEKLKEYLKERDYRSGLLLLVDMG 175 (470)
T ss_pred eeEEEEecCcch-HHHHHHHHHHHhhc-cceeeecCC-----------CcCCHHHHHHHHHHHHHhcCccCceEEEEecc
Confidence 358999999865 45566778888776 578899988 57789999999999999988777566667899
Q ss_pred HHHHHHH
Q 021184 104 ALIAWYF 110 (316)
Q Consensus 104 g~~a~~~ 110 (316)
+...+.=
T Consensus 176 SL~~f~~ 182 (470)
T COG3933 176 SLTSFGS 182 (470)
T ss_pred hHHHHHH
Confidence 9776643
No 255
>PRK12467 peptide synthase; Provisional
Probab=79.53 E-value=9.9 Score=42.28 Aligned_cols=96 Identities=13% Similarity=0.047 Sum_probs=65.0
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc-ceEEEEEechh
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI-EQVFLVGHDWG 103 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~G 103 (316)
+.+++.|...+....+..+...|... ..++.+..++.-.... ...++.+++....+.+..... .+..+.|+|+|
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~----~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g 3767 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW----QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLG 3767 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC----CccchHHHHHHHHHHHHHhccCCCeeeeeeecc
Confidence 46999999988887788877777654 7888887765432221 233566666666666655432 37899999999
Q ss_pred HHHHHHHHHh---Cccccceeeeec
Q 021184 104 ALIAWYFCLL---RPDRVKALVNLS 125 (316)
Q Consensus 104 g~~a~~~a~~---~p~~v~~~il~~ 125 (316)
|.++..++.. ..+.+.-+.++.
T Consensus 3768 ~~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3768 GTLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred hHHHHHHHHHHHHcCCceeEEEEEe
Confidence 9999887764 334455554443
No 256
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=79.02 E-value=2.9 Score=33.26 Aligned_cols=31 Identities=29% Similarity=0.489 Sum_probs=24.7
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHh
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+.+++...|+++-.++|||+|-+.|+.++..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhCC
Confidence 3455667788899999999999999877653
No 257
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=77.71 E-value=39 Score=28.44 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=43.2
Q ss_pred CCeEEEEccCCCC---hhhHHHHHHHHhhCCceEEecCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHH--hCcceE
Q 021184 24 GPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRGY---GDTDAPPSITSYTALHVVGDLVGLLDE--FGIEQV 95 (316)
Q Consensus 24 ~~~vv~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 95 (316)
+.+||+++.+... ..........|.+.|+.|+-+. +|. |..... .-.++++.+..+...+.. +..+++
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g~g---r~~~~~~I~~~~~~~~~~~~l~gk~v 191 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVGPG---RMAEPEEIVAAAERALSPKDLAGKRV 191 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcCCC---CCCCHHHHHHHHHHHhhhcccCCCEE
Confidence 4567777754322 2234556778888899988665 333 222211 234678887777777643 344567
Q ss_pred EEEEe
Q 021184 96 FLVGH 100 (316)
Q Consensus 96 ~l~G~ 100 (316)
.+.|.
T Consensus 192 lITgG 196 (399)
T PRK05579 192 LITAG 196 (399)
T ss_pred EEeCC
Confidence 77777
No 258
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=77.33 E-value=3.5 Score=32.80 Aligned_cols=31 Identities=13% Similarity=-0.087 Sum_probs=24.6
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHh
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
+.+++...+.++..++|||+|=..|+.++..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG~ 96 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAGV 96 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhCC
Confidence 4455666788899999999999888877654
No 259
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=75.77 E-value=33 Score=27.73 Aligned_cols=53 Identities=13% Similarity=0.098 Sum_probs=32.0
Q ss_pred EEeeCCeeEEEEecCC-------CCeEEEEccCCCC--hhhHHHHHHHHhhCCceEEecCCCC
Q 021184 8 TVATNGINMHVASIGT-------GPAVLFLHGFPEL--WYSWRKQLLYLSSRGYRAIAPDLRG 61 (316)
Q Consensus 8 ~~~~~g~~i~~~~~g~-------~~~vv~~hG~~~~--~~~~~~~~~~l~~~g~~v~~~d~~G 61 (316)
+-+..+..++|...|+ +++=+|+||.|.. .....++++.-.. +..|+..|.-+
T Consensus 188 f~np~Np~~hy~ttg~EI~~q~~g~vDi~V~gaGTGGTitgvGRylke~~~-~~kVv~vdp~~ 249 (362)
T KOG1252|consen 188 FHNPGNPLAHYETTGPEIWRQLDGKVDIFVAGAGTGGTITGVGRYLKEQNP-NIKVVGVDPQE 249 (362)
T ss_pred hcCCCCcccccccccHHHHHHhcCCCCEEEeccCCCceeechhHHHHHhCC-CCEEEEeCCCc
Confidence 3344566688888774 6777888877643 3344444443333 37788877543
No 260
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=75.16 E-value=5.5 Score=31.06 Aligned_cols=51 Identities=18% Similarity=0.083 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCc---ceEEEEEechhHHHHHHHHHh---CccccceeeeecccccC
Q 021184 80 VGDLVGLLDEFGI---EQVFLVGHDWGALIAWYFCLL---RPDRVKALVNLSVVFRS 130 (316)
Q Consensus 80 ~~~~~~~~~~~~~---~~~~l~G~S~Gg~~a~~~a~~---~p~~v~~~il~~~~~~~ 130 (316)
.+.+.+.++.+.. .++++.|-|+|+.-+...... .-+++++.+..+++...
T Consensus 93 ~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 93 FEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred HHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 3344444444432 269999999999777654433 23469999999986644
No 261
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=75.08 E-value=21 Score=23.62 Aligned_cols=74 Identities=14% Similarity=0.010 Sum_probs=49.8
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhC-CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-cceEEEEEechh
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFG-IEQVFLVGHDWG 103 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~G~S~G 103 (316)
.||.-|| .-+......++.+... --.+.++++. ...+.+++.+.+.+.++..+ .+.+.++-==.|
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~g 68 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY-----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGG 68 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET-----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTT
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc-----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCC
Confidence 4788899 4556666777777665 3466666654 34578999999999998886 446666665556
Q ss_pred HHHHHHHHH
Q 021184 104 ALIAWYFCL 112 (316)
Q Consensus 104 g~~a~~~a~ 112 (316)
|...-.++.
T Consensus 69 gsp~n~a~~ 77 (116)
T PF03610_consen 69 GSPFNEAAR 77 (116)
T ss_dssp SHHHHHHHH
T ss_pred CccchHHHH
Confidence 554444443
No 262
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=74.78 E-value=4.8 Score=32.21 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=26.1
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+.++..++..-.++|.|+|+.++..+|+.++
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 455555667776789999999999999998753
No 263
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=74.58 E-value=50 Score=27.68 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=43.3
Q ss_pred CeEEEEccCCC---ChhhHHHHHHHHhhCCceEEecCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHH---hCcceEE
Q 021184 25 PAVLFLHGFPE---LWYSWRKQLLYLSSRGYRAIAPDLRGY--GDTDAPPSITSYTALHVVGDLVGLLDE---FGIEQVF 96 (316)
Q Consensus 25 ~~vv~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 96 (316)
.++|+++-+.. ........+..|.+.|+.|+-+..--+ |..... ...+++++++.+.+.+.. +..+++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g~g---~~~~~~~i~~~v~~~~~~~~~~~~~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEGKG---RLAEPETIVKAAEREFSPKEDLEGKRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCcccccccccCC---CCCCHHHHHHHHHHHHhhccccCCceEE
Confidence 46667666432 222445667788888888776653222 332211 244788888888877754 4445677
Q ss_pred EEEe
Q 021184 97 LVGH 100 (316)
Q Consensus 97 l~G~ 100 (316)
+.|.
T Consensus 190 it~g 193 (390)
T TIGR00521 190 ITAG 193 (390)
T ss_pred EecC
Confidence 7666
No 264
>PRK10279 hypothetical protein; Provisional
Probab=74.14 E-value=4.9 Score=32.06 Aligned_cols=33 Identities=24% Similarity=0.387 Sum_probs=25.9
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+.++..++..-.++|.|+|+.++..+|+...
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 444555567777789999999999999998654
No 265
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=73.88 E-value=25 Score=23.86 Aligned_cols=29 Identities=28% Similarity=0.316 Sum_probs=21.2
Q ss_pred CCCeEEEEccCCCChhhH--HHHHHHHhhCC
Q 021184 23 TGPAVLFLHGFPELWYSW--RKQLLYLSSRG 51 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~--~~~~~~l~~~g 51 (316)
++|.|+-+||++|..-.| +-+++.|-..|
T Consensus 51 ~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 51 RKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 478999999999988765 34566665555
No 266
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=73.72 E-value=5.9 Score=28.52 Aligned_cols=33 Identities=24% Similarity=0.213 Sum_probs=25.0
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+.+...++..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334444457667789999999999999998654
No 267
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=73.52 E-value=4.7 Score=31.93 Aligned_cols=31 Identities=26% Similarity=0.212 Sum_probs=23.9
Q ss_pred HHHHHHhC-cceEEEEEechhHHHHHHHHHhC
Q 021184 84 VGLLDEFG-IEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 84 ~~~~~~~~-~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+.+...+ +++..++|||+|=+.|+.++...
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~l 104 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALVAAGAL 104 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455566 88999999999999888877543
No 268
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=71.84 E-value=6.6 Score=28.89 Aligned_cols=30 Identities=30% Similarity=0.285 Sum_probs=22.9
Q ss_pred HHHHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 85 GLLDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.++..+...-.++|-|.||.++..++...
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 334444666678999999999999999754
No 269
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=70.18 E-value=12 Score=22.54 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=19.4
Q ss_pred CcceEEEEEechhHHHHHHHHHhCc
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+++.++|-|.|=.+|.+.++.+.
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHHC
T ss_pred CCceEEEEecCCcccHHHHHHHHhc
Confidence 5568999999999999988887763
No 270
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=70.09 E-value=3.3 Score=29.27 Aligned_cols=49 Identities=20% Similarity=0.309 Sum_probs=28.2
Q ss_pred cCCCCCCCCCCC-CCCCCCCHHHHHHHH----HHHHHHh----CcceEEEEEechhHH
Q 021184 57 PDLRGYGDTDAP-PSITSYTALHVVGDL----VGLLDEF----GIEQVFLVGHDWGAL 105 (316)
Q Consensus 57 ~d~~G~G~s~~~-~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~l~G~S~Gg~ 105 (316)
|-+-|||..... .....++..+++.-+ ..+.+.. .+++|.++|+|+++.
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 334578876221 122466888888888 4444443 345899999999987
No 271
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=69.88 E-value=7.7 Score=30.39 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=24.9
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+.++..++..-.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44455666776668899999999999999864
No 272
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=69.85 E-value=6.9 Score=31.37 Aligned_cols=33 Identities=24% Similarity=0.326 Sum_probs=26.1
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+.++..++..-++.|-|+|+.++..+|....
T Consensus 29 Vl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 445555667777889999999999999998643
No 273
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=69.05 E-value=9.1 Score=28.98 Aligned_cols=29 Identities=31% Similarity=0.361 Sum_probs=22.3
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
++..+.+.-.++|-|.|+.++..+|...+
T Consensus 22 L~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 22 LLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 33446666689999999999999997543
No 274
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=68.86 E-value=27 Score=29.81 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=47.2
Q ss_pred ccCCCChhhHHHH-HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHH
Q 021184 31 HGFPELWYSWRKQ-LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWY 109 (316)
Q Consensus 31 hG~~~~~~~~~~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
-|++.+....... ++.-..+||.|+.+|-.|. ..+-..+...+..+++.-.++.|..+|--+=|.=++.
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR----------~~~~~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~ 514 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGR----------MHNNAPLMTSLAKLIKVNKPDLILFVGEALVGNDSVD 514 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEecccc----------ccCChhHHHHHHHHHhcCCCceEEEehhhhhCcHHHH
Confidence 3455554433332 3344456999999998763 2234445667778888777888999998887766665
Q ss_pred HHHh
Q 021184 110 FCLL 113 (316)
Q Consensus 110 ~a~~ 113 (316)
-+..
T Consensus 515 q~~~ 518 (587)
T KOG0781|consen 515 QLKK 518 (587)
T ss_pred HHHH
Confidence 4443
No 275
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=67.71 E-value=17 Score=25.50 Aligned_cols=48 Identities=27% Similarity=0.318 Sum_probs=34.2
Q ss_pred CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcce-EEEEEechhHHHHHHH
Q 021184 51 GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQ-VFLVGHDWGALIAWYF 110 (316)
Q Consensus 51 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S~Gg~~a~~~ 110 (316)
|-.|++.|.+| ...+.+++++.+..+.+. | +. ..++|.|.|=.=++..
T Consensus 67 ~~~vi~Ld~~G----------k~~sSe~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRG----------KALSSEEFADFLERLRDD-G-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCC----------CcCChHHHHHHHHHHHhc-C-CeEEEEEeCcccCCHHHHH
Confidence 67899999987 566778788777766554 4 44 4778999886555544
No 276
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=66.76 E-value=37 Score=28.30 Aligned_cols=102 Identities=19% Similarity=0.105 Sum_probs=61.4
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCC-CCCC---CHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS-ITSY---TALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
+|+++--..+..+.-....+.+.+.|.-|.-.|..++=.--...+ ...+ +++.+.+++......-.....+|.|--
T Consensus 50 ~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl~g~g 129 (456)
T COG3946 50 LVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVLTGPG 129 (456)
T ss_pred eeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceEeecC
Confidence 555555444444444556788888889999999877633321111 1222 344444444443333233356888999
Q ss_pred hhHHHHHHHHHhCccc-cceeeeeccc
Q 021184 102 WGALIAWYFCLLRPDR-VKALVNLSVV 127 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p~~-v~~~il~~~~ 127 (316)
-||.+++..+++-|+. +.+.+.+.+.
T Consensus 130 ~Gg~~A~asaaqSp~atlag~Vsldp~ 156 (456)
T COG3946 130 QGGTLAYASAAQSPDATLAGAVSLDPT 156 (456)
T ss_pred CCcHHHHHHHhhChhhhhcCccCCCCC
Confidence 9999999999987753 5555555543
No 277
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=66.56 E-value=37 Score=25.45 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=28.9
Q ss_pred CCCCeEEEEccCCCChhh--H-HHHHHHHhhCCceEEecCC
Q 021184 22 GTGPAVLFLHGFPELWYS--W-RKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 22 g~~~~vv~~hG~~~~~~~--~-~~~~~~l~~~g~~v~~~d~ 59 (316)
|.++.|.|++-.+.+... | ....+.|.+.|..+..+++
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 346799999988876654 3 4566788899998888875
No 278
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=64.92 E-value=55 Score=24.28 Aligned_cols=72 Identities=18% Similarity=0.180 Sum_probs=44.1
Q ss_pred HHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCcc--ccc
Q 021184 42 KQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD--RVK 119 (316)
Q Consensus 42 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~ 119 (316)
...+.+.++++.++.+|-+|... ...+..+.+..+++......++++=-+..+.-.+..+..+-+ .+.
T Consensus 74 ~~l~~~~~~~~D~vlIDT~Gr~~----------~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~ 143 (196)
T PF00448_consen 74 EALEKFRKKGYDLVLIDTAGRSP----------RDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGID 143 (196)
T ss_dssp HHHHHHHHTTSSEEEEEE-SSSS----------THHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTC
T ss_pred HHHHHHhhcCCCEEEEecCCcch----------hhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCc
Confidence 34455666789999999987432 345566777788888766667666555555555544443322 366
Q ss_pred eeee
Q 021184 120 ALVN 123 (316)
Q Consensus 120 ~~il 123 (316)
++|+
T Consensus 144 ~lIl 147 (196)
T PF00448_consen 144 GLIL 147 (196)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 7664
No 279
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=64.43 E-value=43 Score=28.24 Aligned_cols=65 Identities=12% Similarity=0.116 Sum_probs=46.9
Q ss_pred hCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccc--cceeee
Q 021184 49 SRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDR--VKALVN 123 (316)
Q Consensus 49 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~--v~~~il 123 (316)
..+|.|+.+|-.| ...--+++.+.+.++-+.+.+..+.+|--||=|.-|...|..+-+. +.|+|+
T Consensus 180 ~~~~DvvIvDTAG----------Rl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 180 EEGYDVVIVDTAG----------RLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HcCCCEEEEeCCC----------cccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 4456666666544 2223456777788888888888999999999999999999887654 566665
No 280
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=64.39 E-value=12 Score=26.95 Aligned_cols=29 Identities=31% Similarity=0.416 Sum_probs=22.4
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
++..+...-.+.|-|.|+.++..++...+
T Consensus 22 L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 22 LEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34445555688999999999999988754
No 281
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=63.77 E-value=12 Score=28.23 Aligned_cols=32 Identities=28% Similarity=0.307 Sum_probs=24.5
Q ss_pred HHHHHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 84 VGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 84 ~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
.+.+...+...-.+.|.|.|+.++..+|...+
T Consensus 17 l~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 33444456655689999999999999999775
No 282
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=63.59 E-value=9.6 Score=33.28 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=34.9
Q ss_pred cc-cccEEEEeeCCCcccCCCcchhhhhcc-CccccC-CCceEEEEEcCCCccc
Q 021184 247 QI-KIPVKFMVGDLDITYHIPGIREYIQNG-GFKKDV-PGLQEVIVMEGVAHFI 297 (316)
Q Consensus 247 ~i-~~Pvl~i~G~~D~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~~~~gH~~ 297 (316)
++ ..|.+++||..|-++|.....+.|-+. ...+.. ... .+++++++-|+-
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~l-rYyeV~naqHfD 604 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRL-RYYEVTNAQHFD 604 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccce-eEEEecCCeech
Confidence 44 789999999999999997666655321 111222 334 889999988865
No 283
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=62.61 E-value=6.1 Score=33.26 Aligned_cols=34 Identities=18% Similarity=0.313 Sum_probs=25.4
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhCccccce
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKA 120 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~ 120 (316)
+...++.+-++.|-|.|+.+|..++...++.+..
T Consensus 95 L~E~gl~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 95 LFEANLLPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 3333566668999999999999999876655433
No 284
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=62.36 E-value=9.8 Score=33.17 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=25.9
Q ss_pred HHHHH-HHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 83 LVGLL-DEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 83 ~~~~~-~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+++ +..|+++-.++|||+|=+.|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455 577899999999999999999888765
No 285
>PRK14974 cell division protein FtsY; Provisional
Probab=62.32 E-value=77 Score=25.99 Aligned_cols=66 Identities=15% Similarity=0.134 Sum_probs=41.9
Q ss_pred hhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCcc--ccceeee
Q 021184 48 SSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD--RVKALVN 123 (316)
Q Consensus 48 ~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~il 123 (316)
...|+.++.+|-.|... +...+.+.+..+.+......++++.-+.-|.-+..-+..+.+ .+.++|+
T Consensus 219 ~~~~~DvVLIDTaGr~~----------~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 219 KARGIDVVLIDTAGRMH----------TDANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HhCCCCEEEEECCCccC----------CcHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 34578899999886443 234455666666666666677777777767666665554432 3566665
No 286
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=61.71 E-value=17 Score=26.26 Aligned_cols=28 Identities=25% Similarity=0.338 Sum_probs=21.4
Q ss_pred HHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 87 LDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 87 ~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
++..+...-.++|-|.|+.++..++...
T Consensus 22 L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 22 LEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3344555568999999999999998754
No 287
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=61.36 E-value=12 Score=26.52 Aligned_cols=73 Identities=14% Similarity=0.117 Sum_probs=44.3
Q ss_pred EEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHhCcceEEEEEechh
Q 021184 28 LFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPP----SITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWG 103 (316)
Q Consensus 28 v~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
|++.|.|++...-+.++..|..+ |.--.+-+|..-.|.... -..+|.++.. +.+.++.++..--+++|.|..
T Consensus 44 vl~cGNGgSaadAqHfaael~gR-f~~eR~~lpaIaLt~dsS~lTai~NDy~yd~v---FsRqveA~g~~GDvLigISTS 119 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGR-FEKERPSLPAIALSTDSSVLTAIANDYGYDEV---FSRQVEALGQPGDVLIGISTS 119 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhH-HHhcCCCCCeeEeecccHHHhhhhccccHHHH---HHHHHHhcCCCCCEEEEEeCC
Confidence 55668888888777888777665 555444444443332111 1134444433 445566777666789999988
Q ss_pred H
Q 021184 104 A 104 (316)
Q Consensus 104 g 104 (316)
|
T Consensus 120 G 120 (176)
T COG0279 120 G 120 (176)
T ss_pred C
Confidence 8
No 288
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=61.06 E-value=9.1 Score=28.11 Aligned_cols=33 Identities=15% Similarity=0.282 Sum_probs=23.8
Q ss_pred eEEEEccC---CCChhhHHHHHHHHhhCCceEEecC
Q 021184 26 AVLFLHGF---PELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 26 ~vv~~hG~---~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
.||++|.. ..+......+++.|.++||+++.++
T Consensus 153 ~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 153 DIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 58889942 2334566778888889999988764
No 289
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=60.84 E-value=12 Score=29.25 Aligned_cols=33 Identities=12% Similarity=0.221 Sum_probs=27.0
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecC
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
.||++|....+......+++.|.++||.+++++
T Consensus 232 ~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 232 AMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred cEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 688999776666778888899999999988775
No 290
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=60.75 E-value=1e+02 Score=26.29 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=43.3
Q ss_pred HHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCcc--ccceee
Q 021184 45 LYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD--RVKALV 122 (316)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i 122 (316)
+.+...+|.++.+|-+|.-. .-..+.+.+..+.+......+++|--++-|.-+...|..+-+ .+.++|
T Consensus 176 ~~~~~~~~DvViIDTaGr~~----------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~I 245 (429)
T TIGR01425 176 EKFKKENFDIIIVDTSGRHK----------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVI 245 (429)
T ss_pred HHHHhCCCCEEEEECCCCCc----------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEE
Confidence 34445579999999987321 233455666666666666677777777777666666655432 345555
Q ss_pred e
Q 021184 123 N 123 (316)
Q Consensus 123 l 123 (316)
+
T Consensus 246 l 246 (429)
T TIGR01425 246 I 246 (429)
T ss_pred E
Confidence 4
No 291
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=59.89 E-value=60 Score=24.13 Aligned_cols=32 Identities=25% Similarity=0.130 Sum_probs=22.6
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
+..+-|. ++..-+.+...|+++|++|...|+.
T Consensus 16 ~~~vtGg--~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 16 VAAVTGG--SSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred eeEEecC--CchHHHHHHHHHHhcCcEEEEeecc
Confidence 4444443 3445567788999999999998864
No 292
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=59.18 E-value=23 Score=25.03 Aligned_cols=63 Identities=19% Similarity=0.134 Sum_probs=35.0
Q ss_pred CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 51 GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 51 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
+-.++++|-.| ...+..++++.+..+...-..+=+.++|.|.|=.-.+.- +.+..+.+++.+.
T Consensus 67 ~~~~i~Ld~~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~~~~~------~a~~~lSLS~mTf 129 (155)
T PF02590_consen 67 NDYVILLDERG----------KQLSSEEFAKKLERWMNQGKSDIVFIIGGADGLSEEVRK------RADEKLSLSKMTF 129 (155)
T ss_dssp TSEEEEE-TTS----------EE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--HHHHH------H-SEEEES-SS--
T ss_pred CCEEEEEcCCC----------ccCChHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHHh------hcCceEEEecCCC
Confidence 57789999887 567788888888887776332335789999984332221 2345555665443
No 293
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=59.17 E-value=14 Score=27.99 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=26.5
Q ss_pred CeEEEEccC-CCChhhHHHHHHHHhhCCceEEecC
Q 021184 25 PAVLFLHGF-PELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 ~~vv~~hG~-~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
..||++|.. ..+......+++.|.++||.++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 368888974 4455677888999999999988875
No 294
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=57.38 E-value=20 Score=27.95 Aligned_cols=38 Identities=11% Similarity=0.080 Sum_probs=31.6
Q ss_pred CCCeEEEEccCCCCh--hhHHHHHHHHhhCCceEEecCCC
Q 021184 23 TGPAVLFLHGFPELW--YSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
..|+||++.|+.+++ .....+...|...|++|.++..|
T Consensus 54 ~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~P 93 (264)
T TIGR03709 54 RRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAP 93 (264)
T ss_pred CCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCC
Confidence 358999999997654 46788899999999999999765
No 295
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=56.56 E-value=99 Score=25.70 Aligned_cols=85 Identities=20% Similarity=0.141 Sum_probs=57.0
Q ss_pred CeEEEEccCCC-------ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEE
Q 021184 25 PAVLFLHGFPE-------LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFL 97 (316)
Q Consensus 25 ~~vv~~hG~~~-------~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 97 (316)
..||++||=.. +.+.|..+++.+.++| .+-.+|....|.-++ +++-+..+..++.... -.+
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~-lip~~D~AYQGF~~G--------leeDa~~lR~~a~~~~---~~l 239 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERG-LIPFFDIAYQGFADG--------LEEDAYALRLFAEVGP---ELL 239 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcC-Ceeeeehhhhhhccc--------hHHHHHHHHHHHHhCC---cEE
Confidence 37999998654 3467999999988875 556677766665432 4444445555555432 277
Q ss_pred EEechhHHHHHHHHHhCccccceeeeecc
Q 021184 98 VGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 98 ~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
+..|+.=.+++ |.+||-++.+++.
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeC
Confidence 88887655544 6788999888865
No 296
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=56.52 E-value=9.2 Score=32.09 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=27.2
Q ss_pred HHHHHhCcceEEEEEechhHHHHHHHHHhCcccccee
Q 021184 85 GLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKAL 121 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 121 (316)
+.+...+..+-++.|-|.|+.+|..+|...++.+..+
T Consensus 87 kaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 87 KALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 3333346667789999999999999999766655444
No 297
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=55.65 E-value=27 Score=24.77 Aligned_cols=36 Identities=22% Similarity=0.133 Sum_probs=26.6
Q ss_pred CCeEEEEccCCCChhh--HHHHHHHHhhCCceEEecCC
Q 021184 24 GPAVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~ 59 (316)
.+.||++-|.+++.-. -..+.+.|.+.|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecC
Confidence 3679999999887643 34566788888999999984
No 298
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=55.62 E-value=87 Score=23.58 Aligned_cols=59 Identities=24% Similarity=0.318 Sum_probs=33.5
Q ss_pred CeEEEEccCCCChhhH-HHHHHHHhhCCc-eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEE
Q 021184 25 PAVLFLHGFPELWYSW-RKQLLYLSSRGY-RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLV 98 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~-~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
.+|++.||...++... .-+-.-|.+.|| .|+....-|+- .++++.+-++.-+.+.+.++
T Consensus 139 ~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------------~~d~vi~~l~~~~~~~v~L~ 199 (265)
T COG4822 139 ILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------------LVDTVIEYLRKNGIKEVHLI 199 (265)
T ss_pred EEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------------cHHHHHHHHHHcCCceEEEe
Confidence 4788899988777644 344445566777 55554443321 12345555555566665554
No 299
>PHA02114 hypothetical protein
Probab=55.62 E-value=21 Score=22.57 Aligned_cols=34 Identities=15% Similarity=0.325 Sum_probs=28.0
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecC
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
-+||+--.+..+..-|-.++..|.+.||.|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 3677777778888899999999999999998753
No 300
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=55.41 E-value=20 Score=28.01 Aligned_cols=33 Identities=27% Similarity=0.221 Sum_probs=23.7
Q ss_pred HHHHHhCcc-eEEEEEechhHHHHHHHHHhCccc
Q 021184 85 GLLDEFGIE-QVFLVGHDWGALIAWYFCLLRPDR 117 (316)
Q Consensus 85 ~~~~~~~~~-~~~l~G~S~Gg~~a~~~a~~~p~~ 117 (316)
+.+...+.. .-.++|.|.|+.++..+++..+.+
T Consensus 18 ~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 18 DAFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 333444554 348899999999999999876543
No 301
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=54.46 E-value=50 Score=23.49 Aligned_cols=46 Identities=26% Similarity=0.292 Sum_probs=30.4
Q ss_pred CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHH
Q 021184 51 GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALI 106 (316)
Q Consensus 51 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
+-.++++|-+| ...+..++++.+......-..+-+.++|.+.|=.-
T Consensus 67 ~~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~ 112 (157)
T PRK00103 67 GARVIALDERG----------KQLSSEEFAQELERWRDDGRSDVAFVIGGADGLSP 112 (157)
T ss_pred CCEEEEEcCCC----------CcCCHHHHHHHHHHHHhcCCccEEEEEcCccccCH
Confidence 34688999887 56677888888777644322234577888877433
No 302
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=54.40 E-value=24 Score=28.42 Aligned_cols=19 Identities=16% Similarity=0.333 Sum_probs=16.6
Q ss_pred EEEEechhHHHHHHHHHhC
Q 021184 96 FLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+.|.|+||.+|..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 6789999999999999754
No 303
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=54.25 E-value=11 Score=30.22 Aligned_cols=33 Identities=12% Similarity=0.196 Sum_probs=24.1
Q ss_pred HHHHhCcceEEEEEechhHHHHHHHHHhCcccc
Q 021184 86 LLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRV 118 (316)
Q Consensus 86 ~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 118 (316)
.+...+..+-++.|-|.|+.+|..++...++.+
T Consensus 89 aL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 89 TLVEHQLLPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 333446667789999999999999988654433
No 304
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=54.06 E-value=11 Score=31.25 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=24.7
Q ss_pred HhCcceEEEEEechhHHHHHHHHHhCcccccee
Q 021184 89 EFGIEQVFLVGHDWGALIAWYFCLLRPDRVKAL 121 (316)
Q Consensus 89 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~ 121 (316)
..+..+-++.|-|.|+.+|..+|...++.+..+
T Consensus 107 e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 107 LRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 335567789999999999999999655544443
No 305
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=54.05 E-value=22 Score=27.10 Aligned_cols=68 Identities=13% Similarity=0.133 Sum_probs=45.3
Q ss_pred CCeEEEEccCCCCh--hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhCc-ceEEEEE
Q 021184 24 GPAVLFLHGFPELW--YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVG-DLVGLLDEFGI-EQVFLVG 99 (316)
Q Consensus 24 ~~~vv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~G 99 (316)
.|+||++.|+.+++ .....+...|...|+.|.++..|.. ++... .+..+-..+.. .++.++=
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~--------------eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD--------------RERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH--------------HHHcChHHHHHHHhCCCCCeEEEEe
Confidence 58999999997654 4678889999999999999886631 11111 24444555532 3677776
Q ss_pred echhHH
Q 021184 100 HDWGAL 105 (316)
Q Consensus 100 ~S~Gg~ 105 (316)
-|+=+-
T Consensus 96 rSwY~~ 101 (230)
T TIGR03707 96 RSWYNR 101 (230)
T ss_pred Cchhhh
Confidence 665443
No 306
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=52.66 E-value=41 Score=25.03 Aligned_cols=42 Identities=21% Similarity=0.174 Sum_probs=28.0
Q ss_pred CCCeEEEEccCCCCh---hhHHHHHHHHhhCCceEEecCCCCCCC
Q 021184 23 TGPAVLFLHGFPELW---YSWRKQLLYLSSRGYRAIAPDLRGYGD 64 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~ 64 (316)
..+|++++||..... ..-..+.+.|.+.|..+...-+++-|.
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH 187 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH 187 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC
Confidence 358999999986543 334567788888887666655555444
No 307
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=52.49 E-value=92 Score=24.12 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=37.5
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
.||+++............+..+.+.|..|+.+|....+....+. -..+....+..+.+.+-..|.+++.+++..
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~~~ipvV~i~~~~~~~~~~~~--V~~d~~~~~~~~~~~l~~~g~~~i~~i~~~ 131 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAERGLPVVLVNGRAPPPLKVPH--VSTDDALAMRLAVRHLVALGHRRIGFASGP 131 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHhCCCCEEEEcCCCCCCCCCCE--EEECcHHHHHHHHHHHHHCCCceEEEEeCC
Confidence 45555433322223344456677778899988854322111111 122344444445444444576777777644
No 308
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=51.70 E-value=22 Score=25.60 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=27.9
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEe
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIA 56 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~ 56 (316)
..+.|+++-|-+.+...-.-.+++|.+.|+.|..
T Consensus 24 ~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v 57 (169)
T PF03853_consen 24 KGPRVLILCGPGNNGGDGLVAARHLANRGYNVTV 57 (169)
T ss_dssp TT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEE
Confidence 4678999999998888777889999999999888
No 309
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=51.33 E-value=1.2e+02 Score=26.90 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=53.4
Q ss_pred CeEEEEccCCCChhhHHHHH--------HHHhhCCceEEecCCCC----CC-CCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 021184 25 PAVLFLHGFPELWYSWRKQL--------LYLSSRGYRAIAPDLRG----YG-DTDAPPSITSYTALHVVGDLVGLLDEFG 91 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~--------~~l~~~g~~v~~~d~~G----~G-~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (316)
-++-+-=|.+-+......+. -+|.+-|=.|+.-.--| +| .|.............+...+.+.+..
T Consensus 259 ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e-- 336 (655)
T COG3887 259 IPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE-- 336 (655)
T ss_pred cceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh--
Confidence 36666666665544443322 13334455666553322 33 33322211112223333344444443
Q ss_pred cceEEEEEe------chhHHHHHHHHHhCccccceeeeeccc
Q 021184 92 IEQVFLVGH------DWGALIAWYFCLLRPDRVKALVNLSVV 127 (316)
Q Consensus 92 ~~~~~l~G~------S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
.++++++|| |.|+.+++..-+..-.+ .+.+.++|.
T Consensus 337 ~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 569999999 78999999776665444 667777764
No 310
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=51.24 E-value=40 Score=23.84 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=29.4
Q ss_pred ceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHH
Q 021184 52 YRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIA 107 (316)
Q Consensus 52 ~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 107 (316)
-.|+++|-+| ...+..++++.+....+. +.+-+.++|.+.|=.-.
T Consensus 66 ~~~i~LDe~G----------k~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~ 110 (153)
T TIGR00246 66 AHVVTLDIPG----------KPWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPT 110 (153)
T ss_pred CeEEEEcCCC----------CcCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHH
Confidence 4688888877 456777788777776443 32335677888775433
No 311
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=50.27 E-value=25 Score=23.82 Aligned_cols=14 Identities=21% Similarity=0.422 Sum_probs=10.2
Q ss_pred HHHHhhCCceEEec
Q 021184 44 LLYLSSRGYRAIAP 57 (316)
Q Consensus 44 ~~~l~~~g~~v~~~ 57 (316)
+..|.+.|++|+.+
T Consensus 101 ~~~L~~~GwrvlvV 114 (150)
T COG3727 101 IKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHcCCeEEEE
Confidence 45778889887754
No 312
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=50.22 E-value=54 Score=25.14 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=27.5
Q ss_pred CCCeEEEEccCCCC--hhhH-HHHHHHHhhCCceEEecCCC
Q 021184 23 TGPAVLFLHGFPEL--WYSW-RKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 23 ~~~~vv~~hG~~~~--~~~~-~~~~~~l~~~g~~v~~~d~~ 60 (316)
.+|.|+|++-.... ...| ....+.+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 46889999987743 3443 44566788889998888765
No 313
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=48.70 E-value=1.1e+02 Score=22.57 Aligned_cols=52 Identities=8% Similarity=0.077 Sum_probs=37.2
Q ss_pred eEEeeCCeeEEEEecCC----CCeEE--EEccCCCChhhHHHHHHHHhhCCceE------EecC
Q 021184 7 TTVATNGINMHVASIGT----GPAVL--FLHGFPELWYSWRKQLLYLSSRGYRA------IAPD 58 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~----~~~vv--~~hG~~~~~~~~~~~~~~l~~~g~~v------~~~d 58 (316)
..+..+|..+.|..+.. |++.| ++-|+....+.-.++..+|.++|+.+ +.++
T Consensus 38 ge~~~~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~~~~~~~y~~t~~IN 101 (184)
T TIGR01626 38 GEIVLSGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAAKFPPVKYQTTTIIN 101 (184)
T ss_pred ceEEEcCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHcCCCcccccceEEEE
Confidence 34556778888888763 55444 44467767777889999998888887 6665
No 314
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=47.88 E-value=1.5e+02 Score=24.10 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=50.5
Q ss_pred CeEEEEccCCCC----h-hhHHHHHHHHhh-CCceEEecCCCCCCCCCCCCCC--------------CCCCHHHHHHHH-
Q 021184 25 PAVLFLHGFPEL----W-YSWRKQLLYLSS-RGYRAIAPDLRGYGDTDAPPSI--------------TSYTALHVVGDL- 83 (316)
Q Consensus 25 ~~vv~~hG~~~~----~-~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~--------------~~~~~~~~~~~~- 83 (316)
..|+++-|.... . .....+...|.. .+..++++-.+|.|.-...... ....+.+-+...
T Consensus 32 ~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AY 111 (423)
T COG3673 32 RLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAY 111 (423)
T ss_pred eEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHH
Confidence 467777775421 1 234455666665 5788888877888765322100 011122222211
Q ss_pred HHHHHHh-CcceEEEEEechhHHHHHHHHHh
Q 021184 84 VGLLDEF-GIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 84 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.-++.+. ..++|+++|+|-|+..|-.+|..
T Consensus 112 rFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 112 RFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 1222332 23689999999999999888764
No 315
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=47.24 E-value=71 Score=22.80 Aligned_cols=48 Identities=13% Similarity=0.073 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHh--CcceEEEEEechhHHHHHHHHHhCccccceeeeecc
Q 021184 79 VVGDLVGLLDEF--GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 79 ~~~~~~~~~~~~--~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
.-+.+.++++.+ ..++|+++|-|..|...+.++...++.+..++=.+|
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 334444454443 336799999999999999888776666766664444
No 316
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=46.89 E-value=94 Score=24.99 Aligned_cols=91 Identities=20% Similarity=0.151 Sum_probs=52.8
Q ss_pred HHHHHHHHhhCCceEEecCCCCCCCCCCCCCCC-CC---CHHHHHHHHHHHHHHhCcce------EEEEEech-------
Q 021184 40 WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSIT-SY---TALHVVGDLVGLLDEFGIEQ------VFLVGHDW------- 102 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~------~~l~G~S~------- 102 (316)
-...+..|.+.||.|+.+|-...|......... .. ++.| -+-+.++++...++- ...||-|+
T Consensus 13 GSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D-~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy 91 (329)
T COG1087 13 GSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLD-RALLTAVFEENKIDAVVHFAASISVGESVQNPLKYY 91 (329)
T ss_pred HHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEecccc-HHHHHHHHHhcCCCEEEECccccccchhhhCHHHHH
Confidence 346677888899999999988777654433210 11 1211 123555555555443 23456664
Q ss_pred -----hHHHHHHHHHhCccccceeeeecccccCCCC
Q 021184 103 -----GALIAWYFCLLRPDRVKALVNLSVVFRSRNP 133 (316)
Q Consensus 103 -----Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~ 133 (316)
|....+..+.++ .|+.+|+-++......+
T Consensus 92 ~NNv~gTl~Ll~am~~~--gv~~~vFSStAavYG~p 125 (329)
T COG1087 92 DNNVVGTLNLIEAMLQT--GVKKFIFSSTAAVYGEP 125 (329)
T ss_pred hhchHhHHHHHHHHHHh--CCCEEEEecchhhcCCC
Confidence 344444555554 49999998887654444
No 317
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.68 E-value=35 Score=26.16 Aligned_cols=32 Identities=28% Similarity=0.172 Sum_probs=23.1
Q ss_pred HHHHHHhCcc--eEEEEEechhHHHHHHHHHhCc
Q 021184 84 VGLLDEFGIE--QVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 84 ~~~~~~~~~~--~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
.+.+...++. .-.++|-|.|+.++..++...+
T Consensus 18 l~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 18 LSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3334444554 3479999999999999998754
No 318
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=46.61 E-value=63 Score=24.62 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=28.4
Q ss_pred hHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEE
Q 021184 39 SWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLV 98 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 98 (316)
.++.+++.|.++|+.|..+.+.- ..+..++.+.+...++..+.+.+.++
T Consensus 50 aMRhfa~~L~~~G~~V~Y~~~~~-----------~~~~~s~~~~L~~~~~~~~~~~~~~~ 98 (224)
T PF04244_consen 50 AMRHFADELRAKGFRVHYIELDD-----------PENTQSFEDALARALKQHGIDRLHVM 98 (224)
T ss_dssp HHHHHHHHHHHTT--EEEE-TT------------TT--SSHHHHHHHHHHHH----EEEE
T ss_pred HHHHHHHHHHhCCCEEEEEeCCC-----------ccccccHHHHHHHHHHHcCCCEEEEE
Confidence 34667888999999999998752 11233566777788888888877665
No 319
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=46.61 E-value=13 Score=28.24 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=27.8
Q ss_pred CCeEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCC
Q 021184 24 GPAVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
.|+||++.|+.+++- ....+...|...|+.|.++..|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 468999999987663 5667778888889999999876
No 320
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=46.52 E-value=23 Score=27.67 Aligned_cols=15 Identities=27% Similarity=0.780 Sum_probs=12.3
Q ss_pred CcceEEEEEechhHH
Q 021184 91 GIEQVFLVGHDWGAL 105 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~ 105 (316)
....|+++|||+|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 446899999999974
No 321
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=45.94 E-value=30 Score=27.89 Aligned_cols=22 Identities=27% Similarity=0.413 Sum_probs=18.8
Q ss_pred CcceEEEEEechhHHHHHHHHH
Q 021184 91 GIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
+.++.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4677899999999999988776
No 322
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=45.77 E-value=1.2e+02 Score=23.38 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=34.1
Q ss_pred HHHHHHHhhC-CceEEecCCCCCCCCCCCCCCC---CC---CHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHh
Q 021184 41 RKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSIT---SY---TALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 41 ~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
..+++..+++ |-.++++-. -+|.|....... .. ++..++.|+.+-+...|.++++++..--|-.-++..+++
T Consensus 43 ~~~a~~~a~~~~~~lv~P~i-~yG~s~~h~~fpGTisl~~~t~~~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 43 EAVAERAAERLGEALVLPPI-PYGCSPHHMGFPGTISLSPETLIALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp HHHHHHHHHHHTHEEE---B---BB-GCCTTSTT-BBB-HHHHHHHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEeCCC-ccccCcccCCCCCeEEeCHHHHHHHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 4455555554 213444443 366665433211 22 445555566666666699998888665554445555554
No 323
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.43 E-value=49 Score=24.97 Aligned_cols=39 Identities=15% Similarity=0.139 Sum_probs=26.5
Q ss_pred cCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCC
Q 021184 21 IGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 21 ~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
.++.|..|++-|-... ..-..++..|++.||.|++--.+
T Consensus 3 ~~~~~k~VlItgcs~G-GIG~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 3 LQSQPKKVLITGCSSG-GIGYALAKEFARNGYLVYATARR 41 (289)
T ss_pred cccCCCeEEEeecCCc-chhHHHHHHHHhCCeEEEEEccc
Confidence 3456667777664332 23346789999999999987543
No 324
>PLN03050 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=44.25 E-value=50 Score=25.57 Aligned_cols=34 Identities=21% Similarity=0.051 Sum_probs=28.9
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecC
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
+.|+++-|-|.+...-.-.+++|...|+.|..+-
T Consensus 61 ~~V~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~ 94 (246)
T PLN03050 61 PRVLLVCGPGNNGGDGLVAARHLAHFGYEVTVCY 94 (246)
T ss_pred CeEEEEECCCCCchhHHHHHHHHHHCCCeEEEEE
Confidence 5688899999888887788999999999887765
No 325
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=43.86 E-value=14 Score=35.47 Aligned_cols=26 Identities=38% Similarity=0.439 Sum_probs=20.9
Q ss_pred HHHHHHHHHhCcceEEEEEechhHHH
Q 021184 81 GDLVGLLDEFGIEQVFLVGHDWGALI 106 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
-.+.+++..+|+++-.++|||.|-+-
T Consensus 570 iaLtDlLs~lgi~PDGIvGHS~GElg 595 (2376)
T KOG1202|consen 570 IALTDLLSCLGIRPDGIVGHSLGELG 595 (2376)
T ss_pred HHHHHHHHhcCCCCCcccccccchhc
Confidence 35667788889999999999998543
No 326
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=43.43 E-value=36 Score=18.46 Aligned_cols=28 Identities=29% Similarity=0.500 Sum_probs=24.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCcceEEEEE
Q 021184 72 TSYTALHVVGDLVGLLDEFGIEQVFLVG 99 (316)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
..++.+.+..|+...+..+.+.++.++|
T Consensus 4 ~~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 4 TAWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred cccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 3567889999999999999888888887
No 327
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=43.20 E-value=58 Score=18.70 Aligned_cols=35 Identities=14% Similarity=0.418 Sum_probs=25.9
Q ss_pred ccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 279 KDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 279 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+..|+. .+. +-++.++...|.++++.+.|.+|-++
T Consensus 23 e~~PDT-vIt-L~~G~k~vV~Es~~eVi~ki~~y~~~ 57 (60)
T PF06289_consen 23 EETPDT-VIT-LTNGKKYVVKESVEEVIEKIIEYRRK 57 (60)
T ss_pred EEcCCe-EEE-EeCCCEEEEECCHHHHHHHHHHHHHh
Confidence 456664 444 44546777889999999999999765
No 328
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=43.13 E-value=36 Score=27.19 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=21.9
Q ss_pred hCcceEEEEEechhHHHHHHHHHhCcccc
Q 021184 90 FGIEQVFLVGHDWGALIAWYFCLLRPDRV 118 (316)
Q Consensus 90 ~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v 118 (316)
.+..+-++.|.|.|+.+|..++....+.+
T Consensus 94 ~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 94 QDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred cCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 35556679999999999999988654333
No 329
>PRK15180 Vi polysaccharide biosynthesis protein TviD; Provisional
Probab=42.82 E-value=1e+02 Score=26.63 Aligned_cols=78 Identities=14% Similarity=0.174 Sum_probs=54.8
Q ss_pred CeEEEEccCCCChh-hHHHHHHHHhhCCceEEecCCCCCCCCCCC-------CC----------------CCCCCHHHHH
Q 021184 25 PAVLFLHGFPELWY-SWRKQLLYLSSRGYRAIAPDLRGYGDTDAP-------PS----------------ITSYTALHVV 80 (316)
Q Consensus 25 ~~vv~~hG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~----------------~~~~~~~~~~ 80 (316)
.-++.+-|+.-... ....+.+.|+..+.+.+.|++++-|+-... +. ....+-+++-
T Consensus 97 qKkl~~dG~~LQ~NyVvrHF~Effsd~~R~~mfWSLa~Ad~raqRlAYL~ddP~FAgLs~D~r~lLs~ivvrq~teaEIE 176 (831)
T PRK15180 97 QKKIMAYGFCLQINYLTRHFYEFFSQTERACMYWSLATQGNRHKLLAYLKDDPCFAGMSEDDRALLSNINVEQMDEHAIE 176 (831)
T ss_pred eeeEEeccchhhHHHHHHHHHHHhhhcchhhhhhhcccccchhHHHHHhhcChhhhhhhHhHHHHHHhhHhhcccHHHHH
Confidence 45777888776554 346677888888888888899988765331 00 0122455566
Q ss_pred HHHHHHHHHhCcceEEEEEech
Q 021184 81 GDLVGLLDEFGIEQVFLVGHDW 102 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~ 102 (316)
+|+.+++.-+|.+++++|-|.=
T Consensus 177 eDmmeIVqLLGk~rVvfVTHVN 198 (831)
T PRK15180 177 QDMMEIVQLLGRDRVMFMTHVD 198 (831)
T ss_pred HHHHHHHHHhCCCcEEEEEeec
Confidence 7888888889999999998863
No 330
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=42.60 E-value=34 Score=29.14 Aligned_cols=39 Identities=26% Similarity=0.255 Sum_probs=23.5
Q ss_pred cccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccc
Q 021184 249 KIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFI 297 (316)
Q Consensus 249 ~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~ 297 (316)
...|++++|+.|++....... ....+. ..+++||++|..
T Consensus 376 ~tnviFtNG~~DPW~~lgv~~---------~~~~~~-~~~~I~g~~Hc~ 414 (434)
T PF05577_consen 376 ATNVIFTNGELDPWRALGVTS---------DSSDSV-PAIVIPGGAHCS 414 (434)
T ss_dssp --SEEEEEETT-CCGGGS--S----------SSSSE-EEEEETT--TTG
T ss_pred CCeEEeeCCCCCCcccccCCC---------CCCCCc-ccEEECCCeeec
Confidence 457999999999997765221 223344 667899999986
No 331
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=42.19 E-value=72 Score=25.27 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=45.0
Q ss_pred eEEEEccCCCChhh-HHHHHHHHhhCCc-------eEEecCCCCCCCCCCCCCCCCCCHHHHH--------HHHHHHHHH
Q 021184 26 AVLFLHGFPELWYS-WRKQLLYLSSRGY-------RAIAPDLRGYGDTDAPPSITSYTALHVV--------GDLVGLLDE 89 (316)
Q Consensus 26 ~vv~~hG~~~~~~~-~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~~~--------~~~~~~~~~ 89 (316)
.-|++.|.|...-. -+.+...+.+.|. +++.+|..|.=..+... ....-..++ .++.++++.
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~--l~~~~~~~a~~~~~~~~~~L~e~i~~ 103 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD--LTPFKKPFARKDEEKEGKSLLEVVKA 103 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc--chHHHHHHHhhcCcccCCCHHHHHHh
Confidence 45566676654443 3444555555676 89999998853333221 011111222 245555554
Q ss_pred hCcceEEEEEech-hHHHHHHHH
Q 021184 90 FGIEQVFLVGHDW-GALIAWYFC 111 (316)
Q Consensus 90 ~~~~~~~l~G~S~-Gg~~a~~~a 111 (316)
++ +-+++|.|- ||.+.-...
T Consensus 104 v~--ptvlIG~S~~~g~ft~evv 124 (279)
T cd05312 104 VK--PTVLIGLSGVGGAFTEEVV 124 (279)
T ss_pred cC--CCEEEEeCCCCCCCCHHHH
Confidence 44 668999995 675554443
No 332
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=41.96 E-value=75 Score=20.89 Aligned_cols=37 Identities=30% Similarity=0.288 Sum_probs=24.6
Q ss_pred EEEEccCCCChhhHHHHHHHHhhC-CceEEecCC--CCCCCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDL--RGYGDT 65 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~--~G~G~s 65 (316)
||++.|.+++.-+ .+++.|++. |+.++..|- +-.+..
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~~~~~~~~~ 40 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDDLIREPGWI 40 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHHHHCCGTHC
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecceEEecccc
Confidence 6788888877653 335555554 899988887 444444
No 333
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=41.80 E-value=67 Score=18.56 Aligned_cols=35 Identities=17% Similarity=0.528 Sum_probs=27.9
Q ss_pred ccCCCceEEEEEcCCCccccccchHHHHHHHHHHHhh
Q 021184 279 KDVPGLQEVIVMEGVAHFINQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 279 ~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 315 (316)
+..|+. ++..+.| --+...|.-+++.+.|.+|-++
T Consensus 23 e~~PDt-tItLinG-kkyvVkEsveEVi~kI~~y~rk 57 (67)
T COG1582 23 EAFPDT-TITLING-KKYVVKESVEEVINKIIEYRRK 57 (67)
T ss_pred hccCCc-EEEEEcC-cEEEEcccHHHHHHHHHHHHHH
Confidence 567887 7777754 6677788899999999999775
No 334
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=41.45 E-value=1.5e+02 Score=22.27 Aligned_cols=85 Identities=15% Similarity=0.105 Sum_probs=47.7
Q ss_pred CCCeEEEEccCCCChhh-HHHHHHHHhhC-CceEEecCCCCCCCCCCCCCC--------CCCCHHHHHHH-----HHHHH
Q 021184 23 TGPAVLFLHGFPELWYS-WRKQLLYLSSR-GYRAIAPDLRGYGDTDAPPSI--------TSYTALHVVGD-----LVGLL 87 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~-~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~--------~~~~~~~~~~~-----~~~~~ 87 (316)
..+.|++++-.+..... ...+.+.|.+. |+.+..++... ..+..... ..-+...+.+. +.+++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 45789999988775544 45566778888 99888887643 11100000 00012222222 22333
Q ss_pred HHhCcceEEEEEechhHHHHHH
Q 021184 88 DEFGIEQVFLVGHDWGALIAWY 109 (316)
Q Consensus 88 ~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
+..-.+...++|.|.|+.+...
T Consensus 108 ~~~~~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAALERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHCCCEEEEECHhHHhhCC
Confidence 3221235789999999988775
No 335
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=41.43 E-value=49 Score=25.53 Aligned_cols=20 Identities=20% Similarity=0.104 Sum_probs=18.0
Q ss_pred EEEEechhHHHHHHHHHhCc
Q 021184 96 FLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p 115 (316)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999998764
No 336
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=41.37 E-value=61 Score=29.25 Aligned_cols=42 Identities=14% Similarity=0.090 Sum_probs=29.8
Q ss_pred CCeEEEEccCCCCh---hhHHHHHHHHhhCCceEEecCCCCCCCC
Q 021184 24 GPAVLFLHGFPELW---YSWRKQLLYLSSRGYRAIAPDLRGYGDT 65 (316)
Q Consensus 24 ~~~vv~~hG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~G~s 65 (316)
..|++++||..... ..-..++..|..+|..|-..-+|+-|.+
T Consensus 551 ~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 551 KTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHG 595 (620)
T ss_pred CCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcC
Confidence 56899999987543 3445677888888887777666654444
No 337
>PRK01261 aroD 3-dehydroquinate dehydratase; Provisional
Probab=41.15 E-value=65 Score=24.64 Aligned_cols=65 Identities=14% Similarity=-0.041 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccccCCCCCCCchhhhhh
Q 021184 75 TALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRA 143 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~ 143 (316)
+.+|...++...+......+.-+++.|||- ...+.+.. .+.+.+..+.......|+......++.
T Consensus 157 ~~~Dvl~~l~~~~~~~~~~~~p~i~isMG~-~iSRi~~~---~fGS~lTyas~~~~sAPGQi~v~~l~~ 221 (229)
T PRK01261 157 DNKKFVDDLQYILMKKDEKYKPIVFIPMGR-EFLRIFSG---YYVSDIVYARYDNETAPGQPKRDYYES 221 (229)
T ss_pred ChHHHHHHHHHHHHHHhcCCCCEEEEECCc-HHHHHHHH---HHCCceEEeeCCCCCCCCCCCHHHHHH
Confidence 455555555555444322233456778888 43344332 233333344333333444444444433
No 338
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=40.90 E-value=1.4e+02 Score=21.83 Aligned_cols=61 Identities=16% Similarity=0.182 Sum_probs=36.5
Q ss_pred CCeEEEEccCCC---ChhhHHHHHHHHhhCCceEEecCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021184 24 GPAVLFLHGFPE---LWYSWRKQLLYLSSRGYRAIAPDLRGY---GDTDAPPSITSYTALHVVGDLVGLLD 88 (316)
Q Consensus 24 ~~~vv~~hG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+.+||+++-... ...........|.+.|+.|+-+. +|+ |..... ...+++++++.+...+.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g~g---~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEGYG---ALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCccCC---CCCCHHHHHHHHHHHhc
Confidence 457777775322 22234566778888898888777 344 333221 23467777777766553
No 339
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=39.67 E-value=1.2e+02 Score=22.80 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=33.8
Q ss_pred CCeEEEEccCCCChhh---HHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 021184 24 GPAVLFLHGFPELWYS---WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDE 89 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~ 89 (316)
..+|+++||-....-. .....+.|.+.|.+|-.-.++|.|.+- ..+...++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i---------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI---------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS-----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC---------CHHHHHHHHHHHhh
Confidence 4589999998775533 345667888888777777777655442 23455566666653
No 340
>PF04763 DUF562: Protein of unknown function (DUF562); InterPro: IPR006850 This represents a conserved region found in a number of Chlamydophila pneumoniae proteins.
Probab=39.03 E-value=1.2e+02 Score=20.92 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=28.8
Q ss_pred CCeEEEEccCCC----ChhhHHHHHHHHhhCCc---eEEecCCCC
Q 021184 24 GPAVLFLHGFPE----LWYSWRKQLLYLSSRGY---RAIAPDLRG 61 (316)
Q Consensus 24 ~~~vv~~hG~~~----~~~~~~~~~~~l~~~g~---~v~~~d~~G 61 (316)
.-+||+-|+.++ ....+..+...|...|| ++++++..|
T Consensus 17 ~vvVv~~~~~~~~~~l~~~s~~~l~~eL~~~GYSylNIfs~~~~~ 61 (146)
T PF04763_consen 17 NVVVVCNHSWPGPESLPPESVSLLIEELEESGYSYLNIFSCSSES 61 (146)
T ss_pred cEEEEEeCCcccccCCChHHHHHHHHHHhhcCCceEEEEEEcCCC
Confidence 447888888865 44578888999999987 677777654
No 341
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=38.91 E-value=45 Score=22.30 Aligned_cols=31 Identities=16% Similarity=0.323 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhCcceEEEEEechhHHHHH
Q 021184 78 HVVGDLVGLLDEFGIEQVFLVGHDWGALIAW 108 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
+....+.-.+..++.+.++++||+--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4556777778889999999999976555443
No 342
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=38.78 E-value=1.6e+02 Score=21.91 Aligned_cols=35 Identities=11% Similarity=-0.011 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHH
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
+.++......+..++....-++|.|+|..+....+
T Consensus 62 ~~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~l 96 (198)
T COG0518 62 DPWLPREKDLIKDAGVPGKPVLGICLGHQLLAKAL 96 (198)
T ss_pred cccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHh
Confidence 33678888888887766556889999997665544
No 343
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=38.77 E-value=39 Score=25.57 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=22.2
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
+.=||++|=|.+.+ +..|+++||.|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 34677777766644 5667888999999996
No 344
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=38.29 E-value=57 Score=25.28 Aligned_cols=20 Identities=30% Similarity=0.247 Sum_probs=17.6
Q ss_pred EEEEechhHHHHHHHHHhCc
Q 021184 96 FLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p 115 (316)
.+.|-|.|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998754
No 345
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=38.25 E-value=1.6e+02 Score=21.67 Aligned_cols=62 Identities=21% Similarity=0.233 Sum_probs=37.6
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCcc
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLV-GLLDEFGIE 93 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 93 (316)
+.++++++--.-....-......|.+.|+.|+-+.. |+- . ...+++++++.+. .+++.++++
T Consensus 115 ~~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~--a-----~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 115 RRRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPVP-AFY--H-----RPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred CCCEEEEeccccCCHHHHHHHHHHHHCcCEEECCCc-ccc--c-----CCCCHHHHHHHHHHHHHHhcCCC
Confidence 345666663222222334567778888988887764 221 1 2347888888655 677888765
No 346
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=37.76 E-value=2.1e+02 Score=22.79 Aligned_cols=92 Identities=21% Similarity=0.126 Sum_probs=46.4
Q ss_pred EccCCCChhhHHHHHHHHhhCCceEEec------CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCcceEEEEEe
Q 021184 30 LHGFPELWYSWRKQLLYLSSRGYRAIAP------DLRGYGDTDAPPSITSYTALHVVGDLVGLLDE---FGIEQVFLVGH 100 (316)
Q Consensus 30 ~hG~~~~~~~~~~~~~~l~~~g~~v~~~------d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~G~ 100 (316)
+||.-+++..- -.|...|++|+++ .++|||...+.. ...+..+++..-++. ++.=+.++-|+
T Consensus 11 v~G~vGn~AA~----f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v-----~~~e~l~~~l~~l~~~~~~~~~davltGY 81 (281)
T COG2240 11 VYGSVGNSAAI----FPLQRLGLDVWAVPTVQFSNHTGYGKWTGIV-----MPPEQLADLLNGLEAIDKLGECDAVLTGY 81 (281)
T ss_pred eecccccHhHH----HHHHHcCCceeeeceEEecCCCCCCCCCCcC-----CCHHHHHHHHHHHHhcccccccCEEEEcc
Confidence 45665554433 3344567766654 689999866533 233333333333333 22225667775
Q ss_pred chhH----HHHHHHHHhCccccceeeeecccccC
Q 021184 101 DWGA----LIAWYFCLLRPDRVKALVNLSVVFRS 130 (316)
Q Consensus 101 S~Gg----~~a~~~a~~~p~~v~~~il~~~~~~~ 130 (316)
=-.+ .++-...+.....-+.+++++|...-
T Consensus 82 lgs~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD 115 (281)
T COG2240 82 LGSAEQVRAIAGIVKAVKEANPNALYLCDPVMGD 115 (281)
T ss_pred CCCHHHHHHHHHHHHHHhccCCCeEEEeCCcccC
Confidence 2222 22222222222244578999987643
No 347
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=37.33 E-value=73 Score=26.61 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=27.7
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDT 65 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 65 (316)
|||+|+..- ..|..+++.|.+.|+.|..+-..+.+..
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 788886532 3478899999999999988776665443
No 348
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=36.87 E-value=1.5e+02 Score=22.66 Aligned_cols=82 Identities=21% Similarity=0.157 Sum_probs=45.4
Q ss_pred HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcc--eEEEEEechhHH----HHHHHHHhCccc
Q 021184 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIE--QVFLVGHDWGAL----IAWYFCLLRPDR 117 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~G~S~Gg~----~a~~~a~~~p~~ 117 (316)
++.|.+.+..|+.+|+-|-...-..--....+.+++.+.+.. +.+.+++ +=+.+|-+.|+. =|+.+...++
T Consensus 103 ~eklk~~~vdvvsLDfvgDn~vIk~vy~l~ksv~dyl~~l~~-L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~-- 179 (275)
T COG1856 103 LEKLKEELVDVVSLDFVGDNDVIKRVYKLPKSVEDYLRSLLL-LKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE-- 179 (275)
T ss_pred HHHHHHhcCcEEEEeecCChHHHHHHHcCCccHHHHHHHHHH-HHHcCceeceeEEEEeccCcccchHHHHHHHhcCC--
Confidence 345566678899999876332211100012344444444332 3334443 557889999984 4666666664
Q ss_pred cceeeeecccc
Q 021184 118 VKALVNLSVVF 128 (316)
Q Consensus 118 v~~~il~~~~~ 128 (316)
.+.+|+..-.+
T Consensus 180 ~DalVl~vliP 190 (275)
T COG1856 180 PDALVLVVLIP 190 (275)
T ss_pred CCeEEEEEEec
Confidence 56666655433
No 349
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=36.64 E-value=22 Score=25.77 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+.+.+.++++.....-.-.+|.|||++.++.++--.
T Consensus 83 Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 83 YWEELTEILDWAKTHVTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred hHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHcCc
Confidence 444455555554433456889999999999887643
No 350
>COG0218 Predicted GTPase [General function prediction only]
Probab=36.60 E-value=66 Score=23.93 Aligned_cols=16 Identities=38% Similarity=0.576 Sum_probs=12.0
Q ss_pred EEecCCCCCCCCCCCC
Q 021184 54 AIAPDLRGYGDTDAPP 69 (316)
Q Consensus 54 v~~~d~~G~G~s~~~~ 69 (316)
...+|+||+|....+.
T Consensus 72 ~~lVDlPGYGyAkv~k 87 (200)
T COG0218 72 LRLVDLPGYGYAKVPK 87 (200)
T ss_pred EEEEeCCCcccccCCH
Confidence 6678899999876544
No 351
>PRK04148 hypothetical protein; Provisional
Probab=36.58 E-value=74 Score=21.92 Aligned_cols=30 Identities=7% Similarity=0.039 Sum_probs=21.1
Q ss_pred ceEEEEEechhHHHHHHHHHhCccccceeeeecc
Q 021184 93 EQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
.++..+|...|..+|..++... .-++.++-
T Consensus 18 ~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 5799999998888888877542 24454553
No 352
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=36.53 E-value=40 Score=25.68 Aligned_cols=28 Identities=21% Similarity=0.282 Sum_probs=19.8
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
=||++|=|.+.+ +..|+++||.|+.+|+
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 456666554432 5668889999999997
No 353
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=36.18 E-value=2.4e+02 Score=22.98 Aligned_cols=60 Identities=10% Similarity=0.031 Sum_probs=41.1
Q ss_pred HHHhhCCc-eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhH-HHHHHHHHhC
Q 021184 45 LYLSSRGY-RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGA-LIAWYFCLLR 114 (316)
Q Consensus 45 ~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg-~~a~~~a~~~ 114 (316)
+.+...|. .|+..|.+. ..++.+.+++.+.++++..+...++++|+|.-| -++-++|++.
T Consensus 42 ~~~~~~Gad~V~~~~~~~----------~~~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 42 AQAIQLGANHVWKLSGKP----------DDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred HHHHhcCCCEEEEecCcc----------cccChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 44555555 577766531 236778889999998888664468888877644 7777777764
No 354
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.86 E-value=2.5e+02 Score=23.78 Aligned_cols=47 Identities=9% Similarity=0.133 Sum_probs=25.8
Q ss_pred HHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 45 LYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
+.+.+.+|.|+.+|--|.- ..-..+-+.+.++.+.+..+.+++|=-+
T Consensus 177 ~~fKke~fdvIIvDTSGRh----------~qe~sLfeEM~~v~~ai~Pd~vi~VmDa 223 (483)
T KOG0780|consen 177 DRFKKENFDVIIVDTSGRH----------KQEASLFEEMKQVSKAIKPDEIIFVMDA 223 (483)
T ss_pred HHHHhcCCcEEEEeCCCch----------hhhHHHHHHHHHHHhhcCCCeEEEEEec
Confidence 4566678999999965521 1233344445555555555555444333
No 355
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.69 E-value=68 Score=24.98 Aligned_cols=21 Identities=29% Similarity=0.249 Sum_probs=18.2
Q ss_pred EEEEEechhHHHHHHHHHhCc
Q 021184 95 VFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p 115 (316)
-.++|-|.|+.++..+++..+
T Consensus 34 ~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 34 RMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CEEEEEcHHHHHHHHHHhCCC
Confidence 468999999999999998765
No 356
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=35.57 E-value=1.7e+02 Score=23.86 Aligned_cols=46 Identities=20% Similarity=0.175 Sum_probs=33.0
Q ss_pred HHHHHHHHhCcceEEEEEechhH--HHHHHHHHhCccccceeeeeccc
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGA--LIAWYFCLLRPDRVKALVNLSVV 127 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg--~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
.+..++......+++|+|-|-== .+=..++.++|++|-++.+=+..
T Consensus 267 ~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 267 SLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred HHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 45556677777899999987432 34446677899999998776654
No 357
>PRK04435 hypothetical protein; Provisional
Probab=35.54 E-value=1.4e+02 Score=21.02 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=28.5
Q ss_pred EEecCCCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 18 VASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 18 ~~~~g~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
+.+...+..+-+.-........+..+...+++.|.++..++.
T Consensus 61 ~~~~~~~r~vtL~i~l~Dr~GlLs~Il~~IA~~~aNIltI~q 102 (147)
T PRK04435 61 FDEMVKGKIITLSLLLEDRSGTLSKVLNVIAEAGGNILTINQ 102 (147)
T ss_pred ccccCCCcEEEEEEEEecCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 333334554444444455566788899999999999998865
No 358
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=35.51 E-value=2.2e+02 Score=24.30 Aligned_cols=67 Identities=12% Similarity=-0.010 Sum_probs=47.0
Q ss_pred HHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccc
Q 021184 40 WRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVK 119 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~ 119 (316)
=+..+..|.+.|..|+++- ..+.+++...+..+++..+.++-+++ .-||.+...+...+|+...
T Consensus 74 qd~vaa~l~~~gi~v~a~~--------------~~~~~~y~~~~~~~l~~~~~~p~~i~--DdGg~~~~~~~~~~~~~~~ 137 (413)
T cd00401 74 QDHAAAAIAAAGIPVFAWK--------------GETLEEYWWCIEQALKFPDGEPNMIL--DDGGDLTLLIHKKHPELLP 137 (413)
T ss_pred hHHHHHHHHhcCceEEEEc--------------CCCHHHHHHHHHHHHhccCCCCcEEE--ecchHHHHHHHhhhhhhhh
Confidence 3567888888899998864 23566777778888876554565555 7888888887777776544
Q ss_pred eee
Q 021184 120 ALV 122 (316)
Q Consensus 120 ~~i 122 (316)
.++
T Consensus 138 ~~~ 140 (413)
T cd00401 138 GIR 140 (413)
T ss_pred ccE
Confidence 443
No 359
>PF08433 KTI12: Chromatin associated protein KTI12 ; InterPro: IPR013641 This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II []. The Elongator complex has histone acetyltransferase activity. ; PDB: 3ADB_B 3ADC_B 3A4M_B 3A4N_B 3AM1_A 3A4L_B 3ADD_A.
Probab=35.48 E-value=1.1e+02 Score=24.11 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=22.4
Q ss_pred eEEEEccCCCChhh--HHHHHHHHhhCCceEEecCCCCCC
Q 021184 26 AVLFLHGFPELWYS--WRKQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 26 ~vv~~hG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G 63 (316)
|+|++-|.++++-. -..+.+.|.+.++.|..++--..+
T Consensus 2 pLiil~G~P~SGKTt~a~~L~~~~~~~~~~v~~i~~~~~~ 41 (270)
T PF08433_consen 2 PLIILCGLPCSGKTTRAKELKKYLEEKGKEVVIISDDSLG 41 (270)
T ss_dssp -EEEEE--TTSSHHHHHHHHHHHHHHTT--EEEE-THHHH
T ss_pred EEEEEEcCCCCcHHHHHHHHHHHHHhcCCEEEEEcccccc
Confidence 68899999988754 345667777788888888754444
No 360
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=35.35 E-value=90 Score=18.62 Aligned_cols=11 Identities=27% Similarity=0.631 Sum_probs=8.5
Q ss_pred CCeEEEEccCC
Q 021184 24 GPAVLFLHGFP 34 (316)
Q Consensus 24 ~~~vv~~hG~~ 34 (316)
.|.++++||..
T Consensus 31 ~~~~~lvhGga 41 (71)
T PF10686_consen 31 HPDMVLVHGGA 41 (71)
T ss_pred CCCEEEEECCC
Confidence 46788999876
No 361
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=35.13 E-value=2.2e+02 Score=22.23 Aligned_cols=38 Identities=13% Similarity=0.133 Sum_probs=25.1
Q ss_pred CCCeEEEEccCCCChhh-HHHHHHHHhhCCce-EEecCCC
Q 021184 23 TGPAVLFLHGFPELWYS-WRKQLLYLSSRGYR-AIAPDLR 60 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~-~~~~~~~l~~~g~~-v~~~d~~ 60 (316)
..|.|++++-.++.... ...+.+.|.+.|+. |-.++.+
T Consensus 27 ~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 27 EDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 36789999977665543 45556677777873 5556654
No 362
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.13 E-value=65 Score=25.03 Aligned_cols=21 Identities=24% Similarity=-0.007 Sum_probs=18.1
Q ss_pred EEEEEechhHHHHHHHHHhCc
Q 021184 95 VFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 95 ~~l~G~S~Gg~~a~~~a~~~p 115 (316)
-.+.|-|.|+.++..+++..+
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 38 RKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCCC
Confidence 468899999999999998764
No 363
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=35.05 E-value=71 Score=22.52 Aligned_cols=19 Identities=26% Similarity=0.305 Sum_probs=16.2
Q ss_pred ceEEEEEechhHHHHHHHH
Q 021184 93 EQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 93 ~~~~l~G~S~Gg~~a~~~a 111 (316)
..-++.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457889999999999988
No 364
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=34.75 E-value=3e+02 Score=23.67 Aligned_cols=70 Identities=14% Similarity=0.163 Sum_probs=37.8
Q ss_pred HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCcc--cccee
Q 021184 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD--RVKAL 121 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~ 121 (316)
.+.+...+|.++.+|-+|.... -+...+.+..+.+.+....+++|--++-|.-+...|..+-+ .+.++
T Consensus 175 l~~~~~~~~DvVIIDTaGr~~~----------d~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~gi 244 (428)
T TIGR00959 175 LEYAKENGFDVVIVDTAGRLQI----------DEELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGV 244 (428)
T ss_pred HHHHHhcCCCEEEEeCCCcccc----------CHHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEE
Confidence 3444456799999999875332 12244444455554555555555555555555555544322 34555
Q ss_pred ee
Q 021184 122 VN 123 (316)
Q Consensus 122 il 123 (316)
|+
T Consensus 245 Il 246 (428)
T TIGR00959 245 VL 246 (428)
T ss_pred EE
Confidence 53
No 365
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=34.39 E-value=2.5e+02 Score=22.69 Aligned_cols=75 Identities=15% Similarity=0.227 Sum_probs=42.1
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCC----CCC--CCCCCC---------------CCCCCCCHHHHHHHH
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL----RGY--GDTDAP---------------PSITSYTALHVVGDL 83 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~----~G~--G~s~~~---------------~~~~~~~~~~~~~~~ 83 (316)
+.||++-|-.++.-+ .++-.|++.+-.++..|- +|. |...+. .....++..++.++.
T Consensus 4 ~~ii~I~GpTasGKS--~LAl~LA~~~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 4 NKIVFIFGPTAVGKS--NILFHFPKGKAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred CcEEEEECCCccCHH--HHHHHHHHhCCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 347777777665442 233344444347888883 332 111110 112567889999999
Q ss_pred HHHHHHhC--cceEEEEEec
Q 021184 84 VGLLDEFG--IEQVFLVGHD 101 (316)
Q Consensus 84 ~~~~~~~~--~~~~~l~G~S 101 (316)
.+.++.+. .+..+++|.|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 99888762 2234666644
No 366
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=34.23 E-value=58 Score=26.16 Aligned_cols=32 Identities=22% Similarity=0.123 Sum_probs=20.7
Q ss_pred HHHHHHHHhCcceEEEEEechhHHHHHHHHHh
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~ 113 (316)
.+.++++.+.....-++|.|+|+.+++.+.--
T Consensus 123 El~~i~~w~~~~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 123 ELKEILDWAKTHVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHHHcCCCEEEEcHHHHHHHHHcCC
Confidence 34444444332345689999999998876654
No 367
>PRK11320 prpB 2-methylisocitrate lyase; Provisional
Probab=33.96 E-value=2.5e+02 Score=22.58 Aligned_cols=64 Identities=14% Similarity=0.168 Sum_probs=40.5
Q ss_pred cCCCChhhHHHHHHHHhhCCceEEec-CCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEE
Q 021184 32 GFPELWYSWRKQLLYLSSRGYRAIAP-DLRG---YGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVG 99 (316)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~g~~v~~~-d~~G---~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
|+| +.....+.++.+.+.|..-+.+ |..+ +|..... .-.+.+++++-|...++.....+++|+.
T Consensus 88 GyG-~~~~v~r~V~~~~~aGaagi~IEDq~~pK~cg~~~~~---~lv~~ee~~~kI~Aa~~a~~~~d~~IiA 155 (292)
T PRK11320 88 GFG-GAFNIARTVKSMIKAGAAAVHIEDQVGAKRCGHRPNK---EIVSQEEMVDRIKAAVDARTDPDFVIMA 155 (292)
T ss_pred CCC-CHHHHHHHHHHHHHcCCeEEEEecCCCccccCCCCCC---cccCHHHHHHHHHHHHHhccCCCeEEEE
Confidence 555 6666677888888888877777 6542 2222211 2457888888888877765434455543
No 368
>TIGR03586 PseI pseudaminic acid synthase.
Probab=33.60 E-value=2.7e+02 Score=22.85 Aligned_cols=83 Identities=16% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCc-eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGY-RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
.+.||++--|+ .+...|..-++.+.+.|. .|+.... .|..+......++. .+..+-+..+ -+|.+..|+
T Consensus 133 ~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~LlhC----~s~YP~~~~~~nL~----~i~~lk~~f~-~pVG~SDHt 202 (327)
T TIGR03586 133 TGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLKC----TSSYPAPLEDANLR----TIPDLAERFN-VPVGLSDHT 202 (327)
T ss_pred cCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEec----CCCCCCCcccCCHH----HHHHHHHHhC-CCEEeeCCC
Confidence 37799999999 578888888888988776 4555542 23322211222332 2333333344 477778999
Q ss_pred hhHHHHHHHHHhCc
Q 021184 102 WGALIAWYFCLLRP 115 (316)
Q Consensus 102 ~Gg~~a~~~a~~~p 115 (316)
.|-.+++...+...
T Consensus 203 ~G~~~~~aAva~GA 216 (327)
T TIGR03586 203 LGILAPVAAVALGA 216 (327)
T ss_pred CchHHHHHHHHcCC
Confidence 99766666655543
No 369
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=33.21 E-value=97 Score=23.09 Aligned_cols=40 Identities=13% Similarity=0.199 Sum_probs=29.7
Q ss_pred HHHHHhCcceEEEEE-echhHHHHHHHHHhCccccceeeeeccc
Q 021184 85 GLLDEFGIEQVFLVG-HDWGALIAWYFCLLRPDRVKALVNLSVV 127 (316)
Q Consensus 85 ~~~~~~~~~~~~l~G-~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
+..+.+...++.++| ..+|+.++..++.. .+..+++++.-
T Consensus 14 ~~q~~L~~~~V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQATVAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCcEEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 344556667888888 66888898888775 37788888875
No 370
>PRK05665 amidotransferase; Provisional
Probab=33.18 E-value=83 Score=24.29 Aligned_cols=37 Identities=14% Similarity=-0.013 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHH
Q 021184 75 TALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
....++..+.++++..-..++=++|.|+|..+...++
T Consensus 72 ~~~pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 72 GTDPWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred ccchHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 3455777777777765333455899999997776554
No 371
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=33.04 E-value=99 Score=26.73 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=36.5
Q ss_pred ccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccc-cccc-----------hHHHHHHHHHHHh
Q 021184 248 IKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFI-NQEK-----------ADEVSSHIYDFIK 314 (316)
Q Consensus 248 i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~-~~~~-----------~~~~~~~i~~fl~ 314 (316)
-...|++.+|..|++-..... .....+. ..+.+.|++|.. +... ...+.+.+..||+
T Consensus 432 ~atnVvf~NG~~DPWh~LG~~---------~st~~~~-~~~li~gtsHCaDMyp~~~sD~~~L~~aR~~i~~~l~~wl~ 500 (514)
T KOG2182|consen 432 NATNVVFPNGSLDPWHALGLQ---------NSTDSSV-VSILINGTSHCADMYPARDSDSPSLKAARNRIDQNLARWLH 500 (514)
T ss_pred CcceEEecCCCCCchhhhccc---------cCCCCCc-eEEEecCCccccccCCCCCCccHHHHHHHHHHHHHHHHHhh
Confidence 367899999999998554321 1223344 778899999987 3211 2445566666664
No 372
>PLN03019 carbonic anhydrase
Probab=32.96 E-value=69 Score=25.96 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWY 109 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
....+.-.+.+++.+.|+++|||-=|.+...
T Consensus 201 v~aSIEYAV~~L~V~~IVV~GHs~CGaVkAa 231 (330)
T PLN03019 201 VGAAIEYAVLHLKVENIVVIGHSACGGIKGL 231 (330)
T ss_pred cchhHHHHHHHhCCCEEEEecCCCchHHHHH
Confidence 4567778888999999999999965554443
No 373
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=32.58 E-value=42 Score=27.59 Aligned_cols=18 Identities=33% Similarity=0.422 Sum_probs=15.9
Q ss_pred EEEEechhHHHHHHHHHh
Q 021184 96 FLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~ 113 (316)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 678999999999999864
No 374
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=32.04 E-value=1.6e+02 Score=19.70 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=45.9
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc-ceEEEEEechhH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI-EQVFLVGHDWGA 104 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S~Gg 104 (316)
.||.-|| .-+......++.+....-.+.+++.. ...+.+++.+.+.++++..+. +.++++-==+||
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~-----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GG 69 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP-----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGG 69 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC-----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCC
Confidence 5788898 44555666667665543466677654 244788888889998888754 456655555566
Q ss_pred HHHH
Q 021184 105 LIAW 108 (316)
Q Consensus 105 ~~a~ 108 (316)
....
T Consensus 70 Sp~n 73 (122)
T cd00006 70 SPNN 73 (122)
T ss_pred CHHH
Confidence 5544
No 375
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.81 E-value=76 Score=22.04 Aligned_cols=29 Identities=14% Similarity=0.276 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHhCcceEEEEEechhHHH
Q 021184 78 HVVGDLVGLLDEFGIEQVFLVGHDWGALI 106 (316)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
+....+.-.+..++.+.++++||+-=|++
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~ 69 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGML 69 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcce
Confidence 45566777778889999999999754433
No 376
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=31.79 E-value=81 Score=16.74 Aligned_cols=33 Identities=27% Similarity=0.296 Sum_probs=23.2
Q ss_pred hCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021184 49 SRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLD 88 (316)
Q Consensus 49 ~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
..+|.+.++|+||.-. ...|.++..+.+.+++.
T Consensus 11 ~~~y~~~~pdlpg~~t-------~G~t~eea~~~~~eal~ 43 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCFT-------QGDTLEEALENAKEALE 43 (48)
T ss_dssp SSSEEEEETTCCTCEE-------EESSHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChhh-------cCCCHHHHHHHHHHHHH
Confidence 3479999999997642 23467777777776665
No 377
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=31.62 E-value=2.6e+02 Score=22.88 Aligned_cols=34 Identities=15% Similarity=0.030 Sum_probs=24.3
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
++...|.+++-..+..+++.|.+.|+.|..+-..
T Consensus 5 ~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 5 LLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 4444567766666678899999999988776443
No 378
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=31.60 E-value=2.8e+02 Score=22.36 Aligned_cols=98 Identities=10% Similarity=0.062 Sum_probs=57.7
Q ss_pred eEEEEccCCCCh-hhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCC---------------------CCCCHHHHHHHH
Q 021184 26 AVLFLHGFPELW-YSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSI---------------------TSYTALHVVGDL 83 (316)
Q Consensus 26 ~vv~~hG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------------------~~~~~~~~~~~~ 83 (316)
..|++-|.+... +....+.+.....|-.++.+|.--.+......+. ....+..++..+
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 456677776655 4566777777888999999986432221111100 001122233333
Q ss_pred HHHHHHh-CcceEEEEEechhHHHHHHHHHhCccccceeee
Q 021184 84 VGLLDEF-GIEQVFLVGHDWGALIAWYFCLLRPDRVKALVN 123 (316)
Q Consensus 84 ~~~~~~~-~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il 123 (316)
.+++.+- +..-++-+|.|.|..++.-.+...|-.+.+++.
T Consensus 83 ~r~l~sR~dV~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 83 VRFLSSRGDVAGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHHhhcccchhheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 3333221 334577889999999999999988866666553
No 379
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=31.48 E-value=76 Score=23.23 Aligned_cols=32 Identities=13% Similarity=0.130 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 45567777888999999999999766665544
No 380
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=31.46 E-value=2.6e+02 Score=22.11 Aligned_cols=63 Identities=13% Similarity=0.061 Sum_probs=38.1
Q ss_pred CceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEE-EechhHHHHHHHHHhCcc-ccceeee
Q 021184 51 GYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLV-GHDWGALIAWYFCLLRPD-RVKALVN 123 (316)
Q Consensus 51 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-G~S~Gg~~a~~~a~~~p~-~v~~~il 123 (316)
++.++.+|.+|.... -....+.+.++++......++++ .-++++.-+...+..+.. .++++|+
T Consensus 154 ~~D~ViIDt~Gr~~~----------~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 154 RVDYILIDTAGKNYR----------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCEEEEECCCCCcC----------CHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 689999998875432 12344455566665555455554 456777777777776532 3555554
No 381
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=31.36 E-value=50 Score=21.94 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=19.5
Q ss_pred hhHHHHHHHHhhCCceEEecCCC
Q 021184 38 YSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 38 ~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
..+..+++.|+++|+.|++.|.-
T Consensus 23 G~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 23 GFFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred chHHHHHHHHHHcCCcEEEEecc
Confidence 35678899999999999999963
No 382
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=31.32 E-value=73 Score=24.05 Aligned_cols=64 Identities=17% Similarity=-0.016 Sum_probs=39.3
Q ss_pred HHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHH
Q 021184 45 LYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWY 109 (316)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~ 109 (316)
..+++. +.+=.+-.+--|+|....-....+-.|-++|+-+++..+..+-.-+=|.|.|+.++-.
T Consensus 57 ~lyaec-m~lPlyrr~i~g~s~nq~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 57 DLYAEC-MGLPLYRRRIRGRSINQKLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDY 120 (277)
T ss_pred HHHHHH-hcCceeeeeccCcccccccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHH
Confidence 334443 3333333333355544332245567788999999999887443478899999977654
No 383
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=31.22 E-value=2.6e+02 Score=21.97 Aligned_cols=73 Identities=21% Similarity=0.238 Sum_probs=45.6
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCc-eEEecCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCcceEEE-EE
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGY-RAIAPDLRGYGDTDA-PPSITSYTALHVVGDLVGLLDEFGIEQVFL-VG 99 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~G 99 (316)
.+.||++--|..++.+.|..-++.+.+.|- +++... | |-|.. +......++. .+..+-+..+ -+|.+ -+
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~-r--G~s~y~~~~~~~~dl~----~i~~lk~~~~-~pV~~ds~ 202 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSSGNGNVILCE-R--GIRTFEKATRNTLDLS----AVPVLKKETH-LPIIVDPS 202 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEE-C--CCCCCCCCCcCCcCHH----HHHHHHHhhC-CCEEEcCC
Confidence 378999999999999999999999988776 455444 3 33332 2111222333 2222223334 47777 79
Q ss_pred echh
Q 021184 100 HDWG 103 (316)
Q Consensus 100 ~S~G 103 (316)
||.|
T Consensus 203 Hs~G 206 (260)
T TIGR01361 203 HAAG 206 (260)
T ss_pred CCCC
Confidence 9988
No 384
>PRK06490 glutamine amidotransferase; Provisional
Probab=31.20 E-value=2.5e+02 Score=21.71 Aligned_cols=35 Identities=11% Similarity=-0.055 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHH
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
..+...+.++++..-..++=++|.|+|..+...+.
T Consensus 69 ~~wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 69 DDFIRREIDWISVPLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred chHHHHHHHHHHHHHHCCCCEEEECHhHHHHHHHc
Confidence 34555566666654223456899999998777653
No 385
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=30.90 E-value=2.8e+02 Score=22.23 Aligned_cols=87 Identities=13% Similarity=-0.015 Sum_probs=53.0
Q ss_pred ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCc
Q 021184 36 LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+...+..+++.+.+.|.+-+.+- | |.+.. ...|.++..+-+..+++..+.+-.+++|.+..-.-++..+...-
T Consensus 24 D~~~l~~li~~l~~~Gv~gi~v~--G---stGE~--~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a~ 96 (296)
T TIGR03249 24 DEAAYRENIEWLLGYGLEALFAA--G---GTGEF--FSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLAE 96 (296)
T ss_pred CHHHHHHHHHHHHhcCCCEEEEC--C---CCcCc--ccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHHH
Confidence 34567788889988888766643 2 11111 35688888888888888876554456666533344444444332
Q ss_pred c-ccceeeeeccccc
Q 021184 116 D-RVKALVNLSVVFR 129 (316)
Q Consensus 116 ~-~v~~~il~~~~~~ 129 (316)
+ .+++++++.|.+.
T Consensus 97 ~~Gadav~~~pP~y~ 111 (296)
T TIGR03249 97 KAGADGYLLLPPYLI 111 (296)
T ss_pred HhCCCEEEECCCCCC
Confidence 2 3677777666543
No 386
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=30.87 E-value=3.1e+02 Score=22.72 Aligned_cols=74 Identities=12% Similarity=0.070 Sum_probs=45.0
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCC--ceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechh
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRG--YRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWG 103 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
-.++++|.-.+.+....+++.+...+ .+++-+.. .|.+... . ...+.++.+.+.+...|+. +.+..|.|
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp--~~~~~~~----~-ps~e~i~~f~~~L~~~Gi~--vtvR~~~G 329 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNP--IDEVEFQ----R-PSPKRIQAFQRVLEQRGVA--VSVRASRG 329 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCC--CCCCCCC----C-CCHHHHHHHHHHHHHCCCe--EEEeCCCC
Confidence 36899999999888888887776543 33344433 2333221 1 2234455566667666653 45789998
Q ss_pred HHHHH
Q 021184 104 ALIAW 108 (316)
Q Consensus 104 g~~a~ 108 (316)
.-+..
T Consensus 330 ~di~a 334 (345)
T PRK14457 330 LDANA 334 (345)
T ss_pred Cchhh
Confidence 75544
No 387
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=30.84 E-value=3.2e+02 Score=22.89 Aligned_cols=64 Identities=19% Similarity=0.112 Sum_probs=38.1
Q ss_pred CeEEEEccCCC--ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEE
Q 021184 25 PAVLFLHGFPE--LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVG 99 (316)
Q Consensus 25 ~~vv~~hG~~~--~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
..++++.|-.. ....+..+.+.|.+.|..+..+|-- . . ..+. +.++...+..+..+.+-|+.+|
T Consensus 26 ~r~livt~~~~~~~~g~~~~v~~~L~~~~~~~~~~~~v----~-~-----~p~~-~~v~~~~~~~~~~~~D~IiavG 91 (380)
T cd08185 26 KKALIVTGNGSSKKTGYLDRVIELLKQAGVEVVVFDKV----E-P-----NPTT-TTVMEGAALAREEGCDFVVGLG 91 (380)
T ss_pred CeEEEEeCCCchhhccHHHHHHHHHHHcCCeEEEeCCc----c-C-----CCCH-HHHHHHHHHHHHcCCCEEEEeC
Confidence 56777877544 3456777888888888888777621 1 1 1123 3444455555555666555555
No 388
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=30.68 E-value=2.8e+02 Score=22.16 Aligned_cols=57 Identities=19% Similarity=0.328 Sum_probs=30.5
Q ss_pred HHHHHHhhCCce--EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHH
Q 021184 42 KQLLYLSSRGYR--AIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIA 107 (316)
Q Consensus 42 ~~~~~l~~~g~~--v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a 107 (316)
..++.+.+.|+. =+.+|. |.|.+.... .-.+..+.+..+ ..++ ..+++|+|-=..+.
T Consensus 167 ~~i~~a~~~GI~~~~IilDP-GiGF~k~~~-----~n~~ll~~l~~l-~~lg--~Pilvg~SRKsfig 225 (282)
T PRK11613 167 EQIARCEAAGIAKEKLLLDP-GFGFGKNLS-----HNYQLLARLAEF-HHFN--LPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHcCCChhhEEEeC-CCCcCCCHH-----HHHHHHHHHHHH-HhCC--CCEEEEecccHHHH
Confidence 334556677885 778885 777543211 122233333333 2333 46789999555444
No 389
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.63 E-value=46 Score=26.49 Aligned_cols=19 Identities=32% Similarity=0.370 Sum_probs=16.8
Q ss_pred EEEEechhHHHHHHHHHhC
Q 021184 96 FLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~ 114 (316)
.++|.|.||.+|+.++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 7889999999999998754
No 390
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=30.50 E-value=1.3e+02 Score=20.90 Aligned_cols=42 Identities=24% Similarity=0.201 Sum_probs=26.8
Q ss_pred eEEEEccCCCChh--hHHHHHHHHhhCCceEEecCCCCCCCCCC
Q 021184 26 AVLFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDLRGYGDTDA 67 (316)
Q Consensus 26 ~vv~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~ 67 (316)
++|.+-|..++.- .-..++..|.++|++|.++=.-+||+...
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~ 44 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEI 44 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCccc
Confidence 4677777765543 45778899999999998776666666544
No 391
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=30.42 E-value=2e+02 Score=20.70 Aligned_cols=58 Identities=17% Similarity=0.339 Sum_probs=38.8
Q ss_pred ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHhCcc
Q 021184 36 LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPS-----ITSYTALHVVGDLVGLLDEFGIE 93 (316)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 93 (316)
+...|+...+.+.+.|++.+.+-.-|++.....+. .......+.++.+.+..+..|.+
T Consensus 18 ~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk 80 (166)
T PF14488_consen 18 TPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK 80 (166)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE
Confidence 45679999999999999888777666665432221 01224456777777777777765
No 392
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=30.36 E-value=64 Score=27.88 Aligned_cols=54 Identities=13% Similarity=0.234 Sum_probs=32.6
Q ss_pred hhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceE-----EEEEechhHHHHHHHHHhC
Q 021184 48 SSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQV-----FLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 48 ~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~G~S~Gg~~a~~~a~~~ 114 (316)
..+|.+++.+|--|. .+ - .+-.+.+-++.+..++| .+.|.|.||.+|..+..++
T Consensus 413 kg~G~rILSiDGGGt---rG-----~-----~~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 413 KGQGLRILSIDGGGT---RG-----L-----ATLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCCceEEEEecCCCc---cc-----h-----hHHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 356889999995431 11 1 11123333344433443 4789999999999888764
No 393
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=30.25 E-value=2.8e+02 Score=21.95 Aligned_cols=74 Identities=22% Similarity=0.286 Sum_probs=44.7
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CcceEEE-EEe
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEF-GIEQVFL-VGH 100 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l-~G~ 100 (316)
.+.||++=-|..++.+.|..-++.+...|-.=+.+=.||. .+. ..|...+.--.....++.. + -++++ ..|
T Consensus 133 ~gkPV~lk~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~-~t~-----~~Y~~~~vdl~~i~~lk~~~~-~pV~~D~sH 205 (266)
T PRK13398 133 TKKPILLKRGMSATLEEWLYAAEYIMSEGNENVVLCERGI-RTF-----ETYTRNTLDLAAVAVIKELSH-LPIIVDPSH 205 (266)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCeEEEEECCC-CCC-----CCCCHHHHHHHHHHHHHhccC-CCEEEeCCC
Confidence 3789999999999999999989988877764334444553 111 1222222111222233322 3 46766 699
Q ss_pred chh
Q 021184 101 DWG 103 (316)
Q Consensus 101 S~G 103 (316)
|.|
T Consensus 206 s~G 208 (266)
T PRK13398 206 ATG 208 (266)
T ss_pred ccc
Confidence 998
No 394
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=30.10 E-value=55 Score=22.22 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=23.7
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
++...|..|+-.-+-.+++.|.++|+.|...-.
T Consensus 2 li~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~ 34 (139)
T PF03033_consen 2 LIATGGTRGHVYPFLALARALRRRGHEVRLATP 34 (139)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTT-EEEEEET
T ss_pred EEEEcCChhHHHHHHHHHHHHhccCCeEEEeec
Confidence 455666667777777889999999999875543
No 395
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=30.02 E-value=3.8e+02 Score=23.45 Aligned_cols=61 Identities=20% Similarity=0.296 Sum_probs=38.0
Q ss_pred CCeEEEEccCCCC---hhhHHHHHHHHhhCCceEEecCCCC----CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 021184 24 GPAVLFLHGFPEL---WYSWRKQLLYLSSRGYRAIAPDLRG----YGDTDAPPSITSYTALHVVGDLVGLLD 88 (316)
Q Consensus 24 ~~~vv~~hG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~~~~~~~~~ 88 (316)
+.+|++++..... .......+..|.+.|+.|+-++. | +|..... .-...++.+..+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G~G---rm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAGVG---RMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcCCC---CCCCHHHHHHHHHHHHh
Confidence 4578888766443 23345667788889999997764 2 2333221 23367777777777663
No 396
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=29.99 E-value=96 Score=26.21 Aligned_cols=65 Identities=12% Similarity=0.151 Sum_probs=33.8
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCccc---cccchHHHHHHHHHHHhh
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFI---NQEKADEVSSHIYDFIKQ 315 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~---~~~~~~~~~~~i~~fl~~ 315 (316)
.-..|++++.|.-|.+-+.- ... +. +.+..+.=.. =.+..||.|+.. .-++.+...+.+.+||.+
T Consensus 187 ~~p~P~VIv~gGlDs~qeD~-~~l-~~-~~l~~rGiA~-LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQEDL-YRL-FR-DYLAPRGIAM-LTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp SS-EEEEEEE--TTS-GGGG-HHH-HH-CCCHHCT-EE-EEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCcchhHHHH-HHH-HH-HHHHhCCCEE-EEEccCCCcccccCCCCcCHHHHHHHHHHHHhc
Confidence 45789999999999975432 111 11 1122222122 345668888764 234556788999999875
No 397
>PF09695 YtfJ_HI0045: Bacterial protein of unknown function (YtfJ_HI0045); InterPro: IPR006513 These are sequences from gammaproteobacteria that are related to the Escherichia coli protein, YtfJ.
Probab=29.92 E-value=1.3e+02 Score=21.40 Aligned_cols=45 Identities=11% Similarity=0.059 Sum_probs=31.6
Q ss_pred eEEeeCCeeEEEEecCC----CCeEEEEc--cCCCChhhHHHHHHHHhhCC
Q 021184 7 TTVATNGINMHVASIGT----GPAVLFLH--GFPELWYSWRKQLLYLSSRG 51 (316)
Q Consensus 7 ~~~~~~g~~i~~~~~g~----~~~vv~~h--G~~~~~~~~~~~~~~l~~~g 51 (316)
..+.++|..+.|..+.+ |++.|+.| |-....+...++.+++.+++
T Consensus 16 Gel~l~~~~~~y~~W~s~~l~GKVrviq~iAGr~sake~N~~l~~aik~a~ 66 (160)
T PF09695_consen 16 GELILNGDKISYQPWNSAQLPGKVRVIQHIAGRSSAKEMNAPLIEAIKAAK 66 (160)
T ss_pred ceEEEcCCcccccccCccccCCCEEEEEEeccCCchhHhhHHHHHHHHHcC
Confidence 45667788888988875 66666655 44555667888888887653
No 398
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=29.87 E-value=83 Score=24.37 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=17.6
Q ss_pred EEEEechhHHHHHHHHHhCcccc
Q 021184 96 FLVGHDWGALIAWYFCLLRPDRV 118 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~p~~v 118 (316)
.+.|-|.|+.++..++. .|+++
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~ 55 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKI 55 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHH
Confidence 78999999999999984 34433
No 399
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.83 E-value=1.2e+02 Score=24.48 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=26.2
Q ss_pred HHHHHHHHHHhCc----ceEEEEEec--hhHHHHHHHHHhC
Q 021184 80 VGDLVGLLDEFGI----EQVFLVGHD--WGALIAWYFCLLR 114 (316)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~l~G~S--~Gg~~a~~~a~~~ 114 (316)
...+.+++++.+. +++.++|-| ||..++..+..+.
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 3456677776643 589999986 9999999888653
No 400
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=29.76 E-value=3e+02 Score=22.23 Aligned_cols=85 Identities=22% Similarity=0.183 Sum_probs=44.7
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCC---------------CCCCCCCCCCC--------CCCHHHHHHH
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRG---------------YGDTDAPPSIT--------SYTALHVVGD 82 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G---------------~G~s~~~~~~~--------~~~~~~~~~~ 82 (316)
.+|.--|.+++........+.-... .++++.|..| .|.+..+.... ..+.++-...
T Consensus 172 ~fVagvGTGGTitGvar~Lk~~~p~-i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~~~ 250 (300)
T COG0031 172 AFVAGVGTGGTITGVARYLKERNPN-VRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAIAT 250 (300)
T ss_pred EEEEeCCcchhHHHHHHHHHhhCCC-cEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHHHH
Confidence 4444445555544444444443333 7888888764 23332221111 1133444445
Q ss_pred HHHHHHHhCcceEEEEEechhHHHH--HHHHHhCc
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIA--WYFCLLRP 115 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a--~~~a~~~p 115 (316)
..++.+..| .++|.|.|+.++ +.+|.+.+
T Consensus 251 ~r~La~~eG----ilvG~SsGA~~~aa~~~a~~~~ 281 (300)
T COG0031 251 ARRLAREEG----LLVGISSGAALAAALKLAKELP 281 (300)
T ss_pred HHHHHHHhC----eeecccHHHHHHHHHHHHHhcC
Confidence 555555555 689999999654 45566655
No 401
>PRK10867 signal recognition particle protein; Provisional
Probab=29.68 E-value=3.7e+02 Score=23.19 Aligned_cols=69 Identities=12% Similarity=0.090 Sum_probs=35.5
Q ss_pred HHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCcc--ccceee
Q 021184 45 LYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD--RVKALV 122 (316)
Q Consensus 45 ~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~--~v~~~i 122 (316)
......+|.++.+|-+|.... -+...+.+..+.+.+....++++.-++-|.-+...|..+-+ .+.++|
T Consensus 177 ~~a~~~~~DvVIIDTaGrl~~----------d~~lm~eL~~i~~~v~p~evllVlda~~gq~av~~a~~F~~~~~i~giI 246 (433)
T PRK10867 177 EEAKENGYDVVIVDTAGRLHI----------DEELMDELKAIKAAVNPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVI 246 (433)
T ss_pred HHHHhcCCCEEEEeCCCCccc----------CHHHHHHHHHHHHhhCCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEE
Confidence 334455799999999885432 12233344444444444455555545444445554444322 244554
Q ss_pred e
Q 021184 123 N 123 (316)
Q Consensus 123 l 123 (316)
+
T Consensus 247 l 247 (433)
T PRK10867 247 L 247 (433)
T ss_pred E
Confidence 4
No 402
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=29.67 E-value=1.2e+02 Score=22.69 Aligned_cols=37 Identities=22% Similarity=0.019 Sum_probs=30.2
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCC
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
.+.|+++-|-|.|...-.-.+++|...|+.|..+-..
T Consensus 49 ~~~v~vlcG~GnNGGDG~VaAR~L~~~G~~V~v~~~~ 85 (203)
T COG0062 49 ARRVLVLCGPGNNGGDGLVAARHLKAAGYAVTVLLLG 85 (203)
T ss_pred CCEEEEEECCCCccHHHHHHHHHHHhCCCceEEEEeC
Confidence 4568889999988888778889999999888777654
No 403
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=29.24 E-value=82 Score=22.89 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=21.3
Q ss_pred EEEccCCCChh--hHHHHHHHHhhCCceEEecCC
Q 021184 28 LFLHGFPELWY--SWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 28 v~~hG~~~~~~--~~~~~~~~l~~~g~~v~~~d~ 59 (316)
.+..+-||..- .-..++..|+++|++|+.+|.
T Consensus 2 ~v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 2 AVTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 34444444433 335678889999999999997
No 404
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=29.02 E-value=2e+02 Score=19.99 Aligned_cols=28 Identities=11% Similarity=-0.130 Sum_probs=19.8
Q ss_pred CCCChhhHHHHHHHHhhCCceEEecCCC
Q 021184 33 FPELWYSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 33 ~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
.||.......+++.|.+.|+.|..+-..
T Consensus 11 ~GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 11 IGGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SSHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred CChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 3444556778899999999988887443
No 405
>PRK07053 glutamine amidotransferase; Provisional
Probab=28.89 E-value=2.7e+02 Score=21.42 Aligned_cols=33 Identities=15% Similarity=0.020 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
+.....++++..-...+-++|.|+|..+....+
T Consensus 68 ~~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 68 FLAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred cHHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 344555555543223456899999998777655
No 406
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=28.64 E-value=46 Score=26.77 Aligned_cols=17 Identities=29% Similarity=0.669 Sum_probs=15.2
Q ss_pred EEEEechhHHHHHHHHH
Q 021184 96 FLVGHDWGALIAWYFCL 112 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~ 112 (316)
.+.|-|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 57899999999999886
No 407
>PLN03014 carbonic anhydrase
Probab=28.62 E-value=97 Score=25.37 Aligned_cols=30 Identities=17% Similarity=0.155 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAW 108 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
....+.-.+.+++.+.|+++|||-=|.+..
T Consensus 206 v~asLEYAV~~L~V~~IVV~GHs~CGaV~A 235 (347)
T PLN03014 206 VGAAIEYAVLHLKVENIVVIGHSACGGIKG 235 (347)
T ss_pred chhHHHHHHHHhCCCEEEEeCCCCchHHHH
Confidence 456777788899999999999996554443
No 408
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=28.62 E-value=3.1e+02 Score=21.93 Aligned_cols=85 Identities=16% Similarity=0.140 Sum_probs=52.3
Q ss_pred hhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCcc
Q 021184 37 WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPD 116 (316)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~ 116 (316)
......+++.+.+.|..-+.+- | |.+.. ...+.++..+-+..+++..+.+-.+++|.+.+..-++.++...-+
T Consensus 20 ~~~l~~l~~~l~~~Gv~gi~v~--G---stGE~--~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~~ 92 (289)
T cd00951 20 EDAYRAHVEWLLSYGAAALFAA--G---GTGEF--FSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAEK 92 (289)
T ss_pred HHHHHHHHHHHHHcCCCEEEEC--c---CCcCc--ccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHHH
Confidence 3456777888888888766653 2 12212 456888888888888888764433555655455555555544322
Q ss_pred -ccceeeeecccc
Q 021184 117 -RVKALVNLSVVF 128 (316)
Q Consensus 117 -~v~~~il~~~~~ 128 (316)
.+++++++.|.+
T Consensus 93 ~Gad~v~~~pP~y 105 (289)
T cd00951 93 AGADGILLLPPYL 105 (289)
T ss_pred hCCCEEEECCCCC
Confidence 367777666544
No 409
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=28.45 E-value=65 Score=23.20 Aligned_cols=21 Identities=29% Similarity=0.143 Sum_probs=16.6
Q ss_pred eEEEEEechhHHHHHHHHHhC
Q 021184 94 QVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 94 ~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.-.+.|-|.||.+++.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 457899999999998887763
No 410
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=28.24 E-value=1.8e+02 Score=19.17 Aligned_cols=33 Identities=12% Similarity=-0.056 Sum_probs=24.7
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecC
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
+|++......+......+...+.+.|+.+...+
T Consensus 2 ~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~ 34 (125)
T cd02065 2 VLGATVGGDVHDIGKNIVAIALRDNGFEVIDLG 34 (125)
T ss_pred EEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcC
Confidence 456666666666667777788889999998885
No 411
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=28.18 E-value=3.2e+02 Score=21.94 Aligned_cols=35 Identities=14% Similarity=0.148 Sum_probs=24.7
Q ss_pred CCeEEEEccCCCChh--hHHHHHHHHhhCCce--EEecC
Q 021184 24 GPAVLFLHGFPELWY--SWRKQLLYLSSRGYR--AIAPD 58 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~--~~~~~~~~l~~~g~~--v~~~d 58 (316)
.|++|++-|..|+.- ..+++..++.+++-+ |+.+|
T Consensus 18 ~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNLD 56 (366)
T KOG1532|consen 18 RPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINLD 56 (366)
T ss_pred CCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeCC
Confidence 688888889887764 457788888776554 44444
No 412
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=27.73 E-value=1.9e+02 Score=20.28 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHH
Q 021184 76 ALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
..+....+.-.+..++.+.++++||+-=|.+...+.
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 455667777788889999999999998776664433
No 413
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=27.57 E-value=96 Score=28.61 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHH---HhCcceEEEEEechhHHHHHHHHH
Q 021184 77 LHVVGDLVGLLD---EFGIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 77 ~~~~~~~~~~~~---~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
.....++.+.+. ..+..--++.|.|.||.++..+|+
T Consensus 47 ~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 47 EAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred hhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 334444555554 334444588999999999998887
No 414
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=27.50 E-value=1.1e+02 Score=20.34 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=24.3
Q ss_pred eEEEEE-echhHHHHHHHHHhCccccceeeeecc
Q 021184 94 QVFLVG-HDWGALIAWYFCLLRPDRVKALVNLSV 126 (316)
Q Consensus 94 ~~~l~G-~S~Gg~~a~~~a~~~p~~v~~~il~~~ 126 (316)
|+.|+| ..+.|...+++...+|+ +.-+.+++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~~ 33 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVSS 33 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEES
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeeee
Confidence 578899 89999999999999884 554444443
No 415
>PRK15219 carbonic anhydrase; Provisional
Probab=27.47 E-value=61 Score=25.10 Aligned_cols=32 Identities=16% Similarity=0.182 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 129 ~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 129 LLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred hhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 45567777888999999999999766555443
No 416
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=27.09 E-value=2.1e+02 Score=23.77 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=34.9
Q ss_pred eEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc
Q 021184 26 AVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI 92 (316)
Q Consensus 26 ~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
+|+.+-|.-.|+ -.+..|.++||.|+.+-+..+..+.. ..++..+...|...+.+.+|+
T Consensus 6 V~v~mSGGVDSS----VaA~lLk~QGyeViGl~m~~~~~~~~----~~C~s~~d~~da~~va~~LGI 64 (356)
T COG0482 6 VLVGMSGGVDSS----VAAYLLKEQGYEVIGLFMKNWDEDGG----GGCCSEEDLRDAERVADQLGI 64 (356)
T ss_pred EEEEccCCHHHH----HHHHHHHHcCCeEEEEEEEeeccCCC----CcCCchhHHHHHHHHHHHhCC
Confidence 455554443332 22455678899999998877665111 234455555666666666654
No 417
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=27.04 E-value=66 Score=34.59 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=24.4
Q ss_pred HHHHHHHhCcceEEEEEechhHHHHHHHHH
Q 021184 83 LVGLLDEFGIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 83 ~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
+.+++...|+++-.++|||+|=+.|+.+|.
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAG 693 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAAG 693 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHhC
Confidence 445667789989899999999998887763
No 418
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=26.98 E-value=81 Score=24.74 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=24.2
Q ss_pred eE-EEEEechhHHHHHHHHHhCccccceeee
Q 021184 94 QV-FLVGHDWGALIAWYFCLLRPDRVKALVN 123 (316)
Q Consensus 94 ~~-~l~G~S~Gg~~a~~~a~~~p~~v~~~il 123 (316)
++ .++|.|+|+.-+..+.++.+.+-++++.
T Consensus 40 ~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 40 PFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred CcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 44 5789999999999999998887666554
No 419
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=26.60 E-value=70 Score=26.24 Aligned_cols=18 Identities=22% Similarity=0.218 Sum_probs=15.2
Q ss_pred EEEEechhHHHHHHHHHh
Q 021184 96 FLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~ 113 (316)
.++|||+|=+.|+..+..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 579999999999887754
No 420
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.52 E-value=2.5e+02 Score=20.31 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=36.4
Q ss_pred HHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhH
Q 021184 46 YLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGA 104 (316)
Q Consensus 46 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg 104 (316)
.|.+.|+..+.+|.=+.=.... ...-..++.+.+.++.+..+.+++.++.-|.|.
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~----~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs 89 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPY----EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGS 89 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCC----cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCc
Confidence 3888899999999865422211 112234455666666666666689999999863
No 421
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=26.48 E-value=2.7e+02 Score=21.05 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=22.9
Q ss_pred CCCeEEEEccCCCChhh-HHHHHHHHhhCCce-EEecCCC
Q 021184 23 TGPAVLFLHGFPELWYS-WRKQLLYLSSRGYR-AIAPDLR 60 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~-~~~~~~~l~~~g~~-v~~~d~~ 60 (316)
.++.|++++-.+..... ...+.+.+.+.|.. +..++..
T Consensus 28 ~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~ 67 (217)
T cd03145 28 AGARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVID 67 (217)
T ss_pred CCCcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccC
Confidence 46778888776655433 44556666666763 5555554
No 422
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=26.25 E-value=3.5e+02 Score=21.83 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=23.3
Q ss_pred EEEEccC--CCChhhHHHHHHHHhhCCceEEecCCCC
Q 021184 27 VLFLHGF--PELWYSWRKQLLYLSSRGYRAIAPDLRG 61 (316)
Q Consensus 27 vv~~hG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G 61 (316)
++++++. ||.......+++.|.+.|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4455554 4444556778899998898887775443
No 423
>PLN00416 carbonate dehydratase
Probab=26.22 E-value=1.3e+02 Score=23.50 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 126 ~~asLEyAv~~L~V~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 126 VGAAVEYAVVHLKVENILVIGHSCCGGIKGLM 157 (258)
T ss_pred chhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 44567777888999999999999666554433
No 424
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=26.21 E-value=2.7e+02 Score=20.44 Aligned_cols=62 Identities=19% Similarity=0.233 Sum_probs=35.0
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCcc
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLV-GLLDEFGIE 93 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 93 (316)
+.+|++++--.-....-......|.+.|+.++-+.. |+- . ...+++++++.+. .+++.+|++
T Consensus 112 ~~pv~i~P~~m~~~~~~~~Nl~~L~~~G~~ii~P~~-g~~--~-----~p~~~~~~~~~i~~~~l~~lg~~ 174 (181)
T TIGR00421 112 RRKLVLVPRETPLNSIHLENMLRLSRMGAIILPPMP-AFY--T-----RPKSVEDMIDFIVGRVLDQLGIE 174 (181)
T ss_pred CCCEEEEeCCCcCCHHHHHHHHHHHHCCCEEECCCC-ccc--C-----CCCCHHHHHHHHHHHHHHHcCCC
Confidence 345555553211122234556678888999877654 321 1 2347888777554 667777754
No 425
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=26.10 E-value=1.7e+02 Score=21.53 Aligned_cols=15 Identities=33% Similarity=0.421 Sum_probs=10.4
Q ss_pred EEecCCCCCCCCCCCC
Q 021184 54 AIAPDLRGYGDTDAPP 69 (316)
Q Consensus 54 v~~~d~~G~G~s~~~~ 69 (316)
++++| ||||..++-.
T Consensus 2 ~I~iD-pGHGg~d~GA 16 (189)
T TIGR02883 2 IIVID-PGHGGIDGGA 16 (189)
T ss_pred EEEEe-CCCCCCCCCC
Confidence 56677 7999876543
No 426
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=26.00 E-value=1.7e+02 Score=20.40 Aligned_cols=49 Identities=8% Similarity=0.089 Sum_probs=28.9
Q ss_pred eeCCeeEEEEecCCCCeEEEEccC-CCC--h---hhHHHHHHHHhhCCceEEecC
Q 021184 10 ATNGINMHVASIGTGPAVLFLHGF-PEL--W---YSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 10 ~~~g~~i~~~~~g~~~~vv~~hG~-~~~--~---~~~~~~~~~l~~~g~~v~~~d 58 (316)
..+|..+.......++.||++-+. .+. . ..+..+.+.+.+.|..++.+.
T Consensus 17 ~~~G~~~~l~~~~gk~~ll~f~~~~~~p~C~~~~~~l~~~~~~~~~~~v~vi~Is 71 (154)
T PRK09437 17 DQDGEQVSLTDFQGQRVLVYFYPKAMTPGCTVQACGLRDNMDELKKAGVVVLGIS 71 (154)
T ss_pred CCCCCEEeHHHhCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 356666655444335666666432 221 1 124556677888889999996
No 427
>TIGR02260 benz_CoA_red_B benzoyl-CoA reductase, bcr type, subunit B. This model describes B, or beta, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA.
Probab=25.77 E-value=4.2e+02 Score=22.63 Aligned_cols=39 Identities=18% Similarity=0.212 Sum_probs=28.2
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCC
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G 63 (316)
+.+-|++||.+.... ...+.+.+.+.|..|++-++..++
T Consensus 266 e~~Ril~~G~P~~~~-~~~~~k~~ee~Ga~VV~~~~~~~~ 304 (413)
T TIGR02260 266 EKYRLVVEGPPNWTN-FREFWKLFYDEGAVVVASSYTKVG 304 (413)
T ss_pred cceEEEEECCCcchh-HHHHHHHHHHCCCEEEEEeccccc
Confidence 468999999887654 334455566789999999877553
No 428
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=25.70 E-value=1.4e+02 Score=24.48 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=25.2
Q ss_pred CCeEEEEcc-CCC-----ChhhHHHHHHHHhhCCceEEecC
Q 021184 24 GPAVLFLHG-FPE-----LWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 24 ~~~vv~~hG-~~~-----~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
+|.|++.|| ..+ +.+.|..+++.|.++|+.|+.+=
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g 215 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFG 215 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 478888888 332 23467888999999887777653
No 429
>PLN03006 carbonate dehydratase
Probab=25.60 E-value=1e+02 Score=24.67 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAW 108 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~ 108 (316)
....+.-.+.+++.+.|+++|||-=|.+..
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~A 187 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQA 187 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHH
Confidence 456777888899999999999997665553
No 430
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=25.49 E-value=1.8e+02 Score=20.38 Aligned_cols=48 Identities=17% Similarity=0.039 Sum_probs=31.3
Q ss_pred HHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
++.+.++..+.+.++++|.+....+...+....-..++-.|+.+....
T Consensus 89 ~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 577788888999999999998765554443332223555555555443
No 431
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=25.44 E-value=3.7e+02 Score=24.75 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=27.9
Q ss_pred EEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEe
Q 021184 54 AIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGH 100 (316)
Q Consensus 54 v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
.-.+-.||+|++ .+++++.++.+.+...++..-+|.++|.
T Consensus 632 te~isCPgCGRT-------~~dlq~~~~~I~~~~~hl~GvkiavMGC 671 (733)
T PLN02925 632 TEYVSCPSCGRT-------LFDLQEVSAEIREKTSHLPGVSIAIMGC 671 (733)
T ss_pred CeEEECCCCCCc-------cccHHHHHHHHHHHhhcCCCceEEEEee
Confidence 334456888876 3458888888888887776557777664
No 432
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=25.21 E-value=2.1e+02 Score=18.82 Aligned_cols=35 Identities=17% Similarity=0.038 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 80 VGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+++.++++.-..++++++=||.-|.+...+..++
T Consensus 7 ~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 7 EEQLEEILEESKEKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp HHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHHH
Confidence 45677777776667899999999999988776654
No 433
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=25.16 E-value=1.1e+02 Score=22.45 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=15.6
Q ss_pred HHHHHHHhhCCceEEecCC
Q 021184 41 RKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 41 ~~~~~~l~~~g~~v~~~d~ 59 (316)
..++..|+++|+.|+.+|.
T Consensus 13 l~~A~~lA~~G~~V~g~D~ 31 (185)
T PF03721_consen 13 LPLAAALAEKGHQVIGVDI 31 (185)
T ss_dssp HHHHHHHHHTTSEEEEE-S
T ss_pred HHHHHHHHhCCCEEEEEeC
Confidence 4668889999999999996
No 434
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=25.07 E-value=1.2e+02 Score=23.13 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=20.7
Q ss_pred CCeEEEEccCCCCh-----hhHHHHHHHHhhCCceEEecC
Q 021184 24 GPAVLFLHGFPELW-----YSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 24 ~~~vv~~hG~~~~~-----~~~~~~~~~l~~~g~~v~~~d 58 (316)
++.|++.+|.+... +.|..+++.|.+.++.|+.+=
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g 144 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLG 144 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEc
Confidence 56777888876643 346778888988887776543
No 435
>PF13383 Methyltransf_22: Methyltransferase domain
Probab=24.96 E-value=1.4e+02 Score=23.15 Aligned_cols=36 Identities=25% Similarity=0.475 Sum_probs=31.2
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
...+|=+||.+.....|..+.+.|.+.||+++..+.
T Consensus 192 ~Qi~iEiH~~~~~~~~~~~~l~~l~~~gfr~F~~e~ 227 (242)
T PF13383_consen 192 CQILIEIHGWPSEHREWYKLLQELEKAGFRLFNVEP 227 (242)
T ss_pred cEEEEEEEeCccchhHHHHHHHHHHHCCcEEEEecC
Confidence 568999999888777788899999999999998774
No 436
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=24.77 E-value=3.2e+02 Score=20.92 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceE
Q 021184 37 WYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQV 95 (316)
Q Consensus 37 ~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (316)
......+++.+.++|..=+.+..-.-|+... +.+...+++.+.+.+...+..+|
T Consensus 45 ~~Hl~al~~~a~~~gv~~V~vH~f~DGRDt~-----P~S~~~yl~~l~~~l~~~~~g~I 98 (223)
T PF06415_consen 45 IDHLFALIKLAKKQGVKKVYVHAFTDGRDTP-----PKSALKYLEELEEKLAEIGIGRI 98 (223)
T ss_dssp HHHHHHHHHHHHHTT-SEEEEEEEE-SSSS------TTTHHHHHHHHHHHHHHHTCTEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCCCCC-----cchHHHHHHHHHHHHHhhCCceE
Confidence 3456667777778886533333333344433 34677888888888888776555
No 437
>cd06296 PBP1_CatR_like Ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation. This group includes the ligand-binding domain of a LacI-like transcriptional regulator, CatR which is involved in catechol degradation. This group belongs to the the LacI-GalR family repressors that are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=24.73 E-value=3.3e+02 Score=20.95 Aligned_cols=58 Identities=19% Similarity=0.086 Sum_probs=30.7
Q ss_pred HHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechh
Q 021184 44 LLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWG 103 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~G 103 (316)
.+.+.+.|..|+++|....+....+. -..+.......+.+.+-..|.+++.+++...+
T Consensus 71 ~~~~~~~~ipvV~i~~~~~~~~~~~~--v~~d~~~~~~~a~~~l~~~g~~~i~~i~~~~~ 128 (270)
T cd06296 71 RAALRRTGIPFVVVDPAGDPDADVPS--VGATNWAGGLAATEHLLELGHRRIGFITGPPD 128 (270)
T ss_pred HHHHhcCCCCEEEEecccCCCCCCCE--EEeCcHHHHHHHHHHHHHcCCCcEEEEcCCCc
Confidence 56666778999999865432111111 12233333443433433446677877766554
No 438
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=24.65 E-value=2e+02 Score=21.64 Aligned_cols=25 Identities=12% Similarity=0.182 Sum_probs=14.0
Q ss_pred HHHHHHHHhCcceEEEEEechhHHH
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGALI 106 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~ 106 (316)
.+.+.++..+.-..+++-||+||..
T Consensus 113 ~ir~~~e~~d~~~~~~i~~slgGGT 137 (216)
T PF00091_consen 113 QIRKEIEKCDSLDGFFIVHSLGGGT 137 (216)
T ss_dssp HHHHHHHTSTTESEEEEEEESSSSH
T ss_pred ccchhhccccccccceeccccccee
Confidence 3333343334446677778877753
No 439
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=24.62 E-value=1.1e+02 Score=28.00 Aligned_cols=78 Identities=18% Similarity=0.212 Sum_probs=46.7
Q ss_pred CCCeEEEEccCCCC----------hhhHHHHHHHHhhCCceEEecCCCC---CCCCCCCCCCCCCC----HHHHHHHHHH
Q 021184 23 TGPAVLFLHGFPEL----------WYSWRKQLLYLSSRGYRAIAPDLRG---YGDTDAPPSITSYT----ALHVVGDLVG 85 (316)
Q Consensus 23 ~~~~vv~~hG~~~~----------~~~~~~~~~~l~~~g~~v~~~d~~G---~G~s~~~~~~~~~~----~~~~~~~~~~ 85 (316)
++.+||+.|..... ...+...++.|.++||++++++--- .|....+...-..| ..+....+..
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlP 126 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYP 126 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHH
Confidence 35689999987532 2457788899999999999997321 12221111101112 2335566777
Q ss_pred HHHHhCcc-eEEEEEe
Q 021184 86 LLDEFGIE-QVFLVGH 100 (316)
Q Consensus 86 ~~~~~~~~-~~~l~G~ 100 (316)
+++..+.. -+.++|.
T Consensus 127 ILKkyg~pATfFvVg~ 142 (672)
T PRK14581 127 LLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHcCCCEEEEEech
Confidence 88888875 3455554
No 440
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=24.55 E-value=1.1e+02 Score=23.21 Aligned_cols=38 Identities=18% Similarity=0.082 Sum_probs=27.6
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGD 64 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~ 64 (316)
+.....+.++......-++.|.++|-.++..|.-||..
T Consensus 154 ~a~asPy~~~~~~l~~Aa~~L~~~gadlIvLDCmGYt~ 191 (221)
T PF07302_consen 154 VAAASPYEGDEEELAAAARELAEQGADLIVLDCMGYTQ 191 (221)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 33333444566677777889999999999999987653
No 441
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=24.53 E-value=1.6e+02 Score=21.22 Aligned_cols=32 Identities=13% Similarity=0.109 Sum_probs=23.9
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
-|++.|.|.+...-..+...|...|..+...+
T Consensus 32 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~ 63 (179)
T TIGR03127 32 RIFVAGAGRSGLVGKAFAMRLMHLGFNVYVVG 63 (179)
T ss_pred EEEEEecCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 57888888776666666777877788887764
No 442
>PRK11460 putative hydrolase; Provisional
Probab=24.48 E-value=2.3e+02 Score=21.57 Aligned_cols=40 Identities=15% Similarity=0.053 Sum_probs=24.7
Q ss_pred CCeEEEEccCCCChhh---HHHHHHHHhhCCceEEecCCCCCC
Q 021184 24 GPAVLFLHGFPELWYS---WRKQLLYLSSRGYRAIAPDLRGYG 63 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G 63 (316)
.++|+++||.-...-. -....+.|.+.|..+-..-++|.|
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~g 190 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLG 190 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 5688999988765432 345566677667655544445433
No 443
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=24.48 E-value=1.4e+02 Score=25.78 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=26.8
Q ss_pred HHHHHHHHHhCcceEEEEEechhHHHHHHHHHhC
Q 021184 81 GDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~ 114 (316)
+|+.++...+..+++.++|....|..+..++...
T Consensus 3 ~~~~~~~~~~~~~~i~v~G~G~sG~a~a~~L~~~ 36 (458)
T PRK01710 3 RDFNEFKKFIKNKKVAVVGIGVSNIPLIKFLVKL 36 (458)
T ss_pred chHHHHhhhhcCCeEEEEcccHHHHHHHHHHHHC
Confidence 4677777777778999999999998777776653
No 444
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=24.44 E-value=2.5e+02 Score=24.52 Aligned_cols=114 Identities=15% Similarity=0.061 Sum_probs=56.9
Q ss_pred eeEEEEecCC----CCeEEEEccCCC---ChhhHHHHHHHHhhCC-ceEEecCCC----C---C-CCCCCCCCCCCCCHH
Q 021184 14 INMHVASIGT----GPAVLFLHGFPE---LWYSWRKQLLYLSSRG-YRAIAPDLR----G---Y-GDTDAPPSITSYTAL 77 (316)
Q Consensus 14 ~~i~~~~~g~----~~~vv~~hG~~~---~~~~~~~~~~~l~~~g-~~v~~~d~~----G---~-G~s~~~~~~~~~~~~ 77 (316)
..+.++..+. ..++|++-|.|- ++..--+-.+.|+..+ .-|+.+++| | . |.++.+ ....+.
T Consensus 121 LYlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaP---GNmGl~ 197 (601)
T KOG4389|consen 121 LYLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAP---GNMGLL 197 (601)
T ss_pred eEEEEeccCCCCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCC---CccchH
Confidence 3444554432 347888888753 2221112234555443 345555554 1 1 222222 233444
Q ss_pred HHHH---HHHHHHHHhCc--ceEEEEEechhHHHHH-HHHHh-CccccceeeeecccccC
Q 021184 78 HVVG---DLVGLLDEFGI--EQVFLVGHDWGALIAW-YFCLL-RPDRVKALVNLSVVFRS 130 (316)
Q Consensus 78 ~~~~---~~~~~~~~~~~--~~~~l~G~S~Gg~~a~-~~a~~-~p~~v~~~il~~~~~~~ 130 (316)
|..- .+.+-+...|. +++.|+|-|-|+.-.. ++.+= -...++..|+-++....
T Consensus 198 DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~ 257 (601)
T KOG4389|consen 198 DQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNN 257 (601)
T ss_pred HHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCC
Confidence 4443 34444445544 4799999999985433 33321 11247777777766543
No 445
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=24.40 E-value=1e+02 Score=23.35 Aligned_cols=16 Identities=25% Similarity=0.642 Sum_probs=13.1
Q ss_pred HHHHhhCCceEEecCC
Q 021184 44 LLYLSSRGYRAIAPDL 59 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~ 59 (316)
+..|+++|+.|+++|.
T Consensus 52 a~~LA~~G~~V~avD~ 67 (218)
T PRK13255 52 MLWLAEQGHEVLGVEL 67 (218)
T ss_pred HHHHHhCCCeEEEEcc
Confidence 4556788999999996
No 446
>PRK03846 adenylylsulfate kinase; Provisional
Probab=24.20 E-value=1.9e+02 Score=21.40 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=24.3
Q ss_pred CCCCeEEEEccCCCChh-h-HHHHHHHHhhCCceEEecC
Q 021184 22 GTGPAVLFLHGFPELWY-S-WRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 22 g~~~~vv~~hG~~~~~~-~-~~~~~~~l~~~g~~v~~~d 58 (316)
+..|.+|.+.|..++.- . ...+...|...|..++.+|
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld 59 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLD 59 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 34677888888766554 3 3445556666677777776
No 447
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=24.13 E-value=1.5e+02 Score=17.98 Aligned_cols=19 Identities=26% Similarity=0.235 Sum_probs=15.8
Q ss_pred HHHHHHHHhhCCceEEecC
Q 021184 40 WRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d 58 (316)
-..++..|++.|+.|+.+|
T Consensus 16 ~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 16 AANLAAALAKRGKRVLLID 34 (99)
T ss_pred HHHHHHHHHHCCCeEEEEC
Confidence 3567788888899999999
No 448
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=24.02 E-value=4.1e+02 Score=21.83 Aligned_cols=32 Identities=13% Similarity=0.146 Sum_probs=22.5
Q ss_pred CHHHHHHHHHHHHHHhC-cceEEEEEechhHHH
Q 021184 75 TALHVVGDLVGLLDEFG-IEQVFLVGHDWGALI 106 (316)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~~~~l~G~S~Gg~~ 106 (316)
+..+.++.+.+.++... ..+++++=|+.=|..
T Consensus 118 ~~~~~~~~i~~~l~~~~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 118 SPSEQLDFIISYLESRPSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CHHHHHHHHHHHHhccCCCCceEEEEECCCChh
Confidence 55666666666666554 568999999987765
No 449
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=23.91 E-value=3.6e+02 Score=21.13 Aligned_cols=40 Identities=25% Similarity=0.304 Sum_probs=32.0
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCC
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGY 62 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 62 (316)
.+.||++=-|...+.+.|...++.+.+.|-.=+.+=.||.
T Consensus 121 tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 3789999999999999999999999988875444444554
No 450
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.38 E-value=1.3e+02 Score=22.18 Aligned_cols=32 Identities=13% Similarity=0.128 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....+.-.+..++.+.++++|||-=|.+...+
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALL 104 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHh
Confidence 55667777888999999999999766555543
No 451
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=23.18 E-value=96 Score=19.11 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=16.8
Q ss_pred hHHHHHHHHhhCCceEEecCC
Q 021184 39 SWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 39 ~~~~~~~~l~~~g~~v~~~d~ 59 (316)
....+.+.|.++||.|+.++-
T Consensus 9 ~Ls~v~~~L~~~GyeVv~l~~ 29 (80)
T PF03698_consen 9 GLSNVKEALREKGYEVVDLEN 29 (80)
T ss_pred CchHHHHHHHHCCCEEEecCC
Confidence 345778899999999998873
No 452
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=22.99 E-value=1.5e+02 Score=25.83 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=32.2
Q ss_pred CCCeEEEEccCCCCh--hhHHHHHHHHhhCCceEEecCCCC
Q 021184 23 TGPAVLFLHGFPELW--YSWRKQLLYLSSRGYRAIAPDLRG 61 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G 61 (316)
..|.||++-|+-+++ .....+...|...|+.|.++..|.
T Consensus 38 ~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 38 GFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 467999999997655 467888999999999999998764
No 453
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=22.99 E-value=1.4e+02 Score=19.98 Aligned_cols=14 Identities=21% Similarity=0.268 Sum_probs=10.7
Q ss_pred HHHHhhCCceEEec
Q 021184 44 LLYLSSRGYRAIAP 57 (316)
Q Consensus 44 ~~~l~~~g~~v~~~ 57 (316)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 34678889999865
No 454
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=22.82 E-value=1.8e+02 Score=19.03 Aligned_cols=50 Identities=14% Similarity=0.224 Sum_probs=30.1
Q ss_pred eeCCeeEEEEecCCCCeEEEEccCCCChhh------HHHHHHHHhhCCceEEecCC
Q 021184 10 ATNGINMHVASIGTGPAVLFLHGFPELWYS------WRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 10 ~~~g~~i~~~~~g~~~~vv~~hG~~~~~~~------~~~~~~~l~~~g~~v~~~d~ 59 (316)
+.+|.++.......+++||++-.......+ +..+.+.+.+.|..++.+..
T Consensus 12 ~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~ 67 (124)
T PF00578_consen 12 DSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGIST 67 (124)
T ss_dssp TTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEES
T ss_pred CCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccc
Confidence 457777777666455666665544222222 33445566677899988874
No 455
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=22.78 E-value=2.8e+02 Score=19.47 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=25.7
Q ss_pred CCCCeEE-EEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 22 GTGPAVL-FLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 22 g~~~~vv-~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
|.+|.|+ .--|.-++...-.-....|.+.||.|+..-+
T Consensus 10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 5666444 4456556555566667788999999987643
No 456
>PRK07877 hypothetical protein; Provisional
Probab=22.47 E-value=1.9e+02 Score=26.85 Aligned_cols=37 Identities=19% Similarity=0.083 Sum_probs=27.5
Q ss_pred HhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccc
Q 021184 89 EFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVV 127 (316)
Q Consensus 89 ~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~ 127 (316)
.+...+|.|+|-+.|+.++..+|..- -+..+++++.-
T Consensus 104 ~L~~~~V~IvG~GlGs~~a~~LaraG--vvG~l~lvD~D 140 (722)
T PRK07877 104 RLGRLRIGVVGLSVGHAIAHTLAAEG--LCGELRLADFD 140 (722)
T ss_pred HHhcCCEEEEEecHHHHHHHHHHHcc--CCCeEEEEcCC
Confidence 34556899999999999998888753 13678888763
No 457
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=22.47 E-value=94 Score=17.61 Aligned_cols=18 Identities=22% Similarity=0.468 Sum_probs=12.9
Q ss_pred ccchHHHHHHHHHHHhhC
Q 021184 299 QEKADEVSSHIYDFIKQF 316 (316)
Q Consensus 299 ~~~~~~~~~~i~~fl~~~ 316 (316)
.|=|+.+.+.+.+||+.|
T Consensus 4 aeiPe~L~~~m~~fie~h 21 (57)
T PF10929_consen 4 AEIPEDLHQAMKDFIETH 21 (57)
T ss_pred ccccHHHHHHHHHHHHcC
Confidence 355777888888888764
No 458
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=22.35 E-value=1e+02 Score=23.23 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHH
Q 021184 77 LHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFC 111 (316)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a 111 (316)
......+.-.+..++.+.|+++||+-=|++...+.
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~ 110 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALD 110 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhccc
Confidence 56677788888999999999999987666555443
No 459
>PLN03049 pyridoxine (pyridoxamine) 5'-phosphate oxidase; Provisional
Probab=22.31 E-value=1.6e+02 Score=25.51 Aligned_cols=35 Identities=20% Similarity=-0.081 Sum_probs=29.1
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
..|+++.|-|.|...-.-.+++|...|+.|.++-.
T Consensus 60 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~ 94 (462)
T PLN03049 60 RRVLALCGPGNNGGDGLVAARHLHHFGYKPSICYP 94 (462)
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHCCCceEEEEE
Confidence 46889999999988887889999999998776653
No 460
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.14 E-value=62 Score=26.06 Aligned_cols=17 Identities=29% Similarity=0.356 Sum_probs=14.8
Q ss_pred EEEEechhHHHHHHHHH
Q 021184 96 FLVGHDWGALIAWYFCL 112 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~ 112 (316)
.+.|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 67899999999998864
No 461
>PLN02748 tRNA dimethylallyltransferase
Probab=22.11 E-value=5.4e+02 Score=22.52 Aligned_cols=76 Identities=22% Similarity=0.195 Sum_probs=42.2
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhC-CceEEecCC----CCC--CCCCCC---------------CCCCCCCHHHHHH
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDL----RGY--GDTDAP---------------PSITSYTALHVVG 81 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~----~G~--G~s~~~---------------~~~~~~~~~~~~~ 81 (316)
.+.+|++-|-.++.-+ .++..|+.. +..|+..|- +|. |....+ .....++..++.+
T Consensus 21 ~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F~~ 98 (468)
T PLN02748 21 KAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDFRD 98 (468)
T ss_pred CCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHHHH
Confidence 4567777776665432 223334433 456888772 332 111110 0125688999999
Q ss_pred HHHHHHHHhCc--ceEEEEEec
Q 021184 82 DLVGLLDEFGI--EQVFLVGHD 101 (316)
Q Consensus 82 ~~~~~~~~~~~--~~~~l~G~S 101 (316)
+....++.+.. +-.+|||.|
T Consensus 99 ~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 99 HAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHhcCCCeEEEcCh
Confidence 99998887632 234666544
No 462
>PRK09936 hypothetical protein; Provisional
Probab=22.10 E-value=3.9e+02 Score=21.51 Aligned_cols=51 Identities=16% Similarity=0.252 Sum_probs=35.9
Q ss_pred ChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCc
Q 021184 36 LWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGI 92 (316)
Q Consensus 36 ~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (316)
+...|+.+.+.+...|++.+.+-+-++|.++... .+-+.....+.....|.
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~------~~g~La~~l~~A~~~Gl 86 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG------QRGWLAKRLAAAQQAGL 86 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc------chHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999884332 24444444444444443
No 463
>PRK13753 dihydropteroate synthase; Provisional
Probab=22.01 E-value=2.7e+02 Score=22.20 Aligned_cols=60 Identities=23% Similarity=0.287 Sum_probs=32.6
Q ss_pred HHHhhCCc--eEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHH
Q 021184 45 LYLSSRGY--RAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 45 ~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
+.+.+.|. .=+.+| ||.|...... ... ..++.+.+.++...++ ..+++|+|-=+.+.-.+
T Consensus 158 ~~~~~~Gi~~~~IilD-PGiGF~k~k~--~~~-n~~ll~~l~~l~~~~g--~PvLvg~SRKsfig~~~ 219 (279)
T PRK13753 158 SALRRSGVAADRLILD-PGMGFFLSPA--PET-SLHVLSNLQKLKSALG--LPLLVSVSRKSFLGATV 219 (279)
T ss_pred HHHHHcCCChhhEEEe-CCCCCCCCCC--hHH-HHHHHHhHHHHHHhCC--CceEEEccHhHHHHHHc
Confidence 34455676 357778 5888632111 111 2224444444433344 46799999888776433
No 464
>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]
Probab=21.93 E-value=1.7e+02 Score=23.47 Aligned_cols=25 Identities=20% Similarity=0.184 Sum_probs=21.9
Q ss_pred CcceEEEEEechhHHHHHHHHHhCc
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
+.+++.++|-|.|=.+|.+.++.+.
T Consensus 40 gPKkVLviGaSsGyGLa~RIsaaFG 64 (398)
T COG3007 40 GPKKVLVIGASSGYGLAARISAAFG 64 (398)
T ss_pred CCceEEEEecCCcccHHHHHHHHhC
Confidence 5668999999999999999988875
No 465
>PRK13938 phosphoheptose isomerase; Provisional
Probab=21.75 E-value=2.8e+02 Score=20.68 Aligned_cols=25 Identities=24% Similarity=0.153 Sum_probs=21.5
Q ss_pred CcceEEEEEechhHHHHHHHHHhCc
Q 021184 91 GIEQVFLVGHDWGALIAWYFCLLRP 115 (316)
Q Consensus 91 ~~~~~~l~G~S~Gg~~a~~~a~~~p 115 (316)
...+++++|.+-.|.+|..++.+..
T Consensus 44 ~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 44 AGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 3468999999999999999998764
No 466
>cd01012 YcaC_related YcaC related amidohydrolases; E.coli YcaC is an homooctameric hydrolase with unknown specificity. Despite its weak sequence similarity, it is structurally related to other amidohydrolases and shares conserved active site residues with them. Multimerisation interface seems not to be conserved in all members.
Probab=21.72 E-value=3e+02 Score=19.38 Aligned_cols=47 Identities=17% Similarity=0.049 Sum_probs=32.1
Q ss_pred HHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeecccc
Q 021184 82 DLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVF 128 (316)
Q Consensus 82 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 128 (316)
++...++..+.+.+++.|.+.-..+............+-+++.+...
T Consensus 78 ~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~~a~~~g~~v~v~~Da~a 124 (157)
T cd01012 78 AFRKALKATGRKQVVLAGLETHVCVLQTALDLLEEGYEVFVVADACG 124 (157)
T ss_pred HHHHHHHhcCCCEEEEEEeeccHHHHHHHHHHHHCCCEEEEEeeCCC
Confidence 67778888899999999999877665544333323466666555544
No 467
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]
Probab=21.62 E-value=4.3e+02 Score=21.21 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=43.3
Q ss_pred ccCCCChhhHHHHHHHHhhCCceEEec-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEE
Q 021184 31 HGFPELWYSWRKQLLYLSSRGYRAIAP-DLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVG 99 (316)
Q Consensus 31 hG~~~~~~~~~~~~~~l~~~g~~v~~~-d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
+|+|. ...-...++.+.+.|..-+.+ |+-+--+....+...-++.+++++-|.+..+.-....+++++
T Consensus 87 tGfG~-~~nvartV~~~~~aG~agi~iEDq~~pk~cgh~~gk~l~~~~e~v~rIkAa~~a~~~~~fvi~A 155 (289)
T COG2513 87 TGFGE-ALNVARTVRELEQAGAAGIHIEDQVGPKRCGHLPGKELVSIDEMVDRIKAAVEARRDPDFVIIA 155 (289)
T ss_pred CCCCc-HHHHHHHHHHHHHcCcceeeeeecccchhcCCCCCCCcCCHHHHHHHHHHHHHhccCCCeEEEe
Confidence 45555 666667788888888765555 554422222223334678999999999988876545566653
No 468
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.57 E-value=2.8e+02 Score=21.16 Aligned_cols=34 Identities=18% Similarity=0.311 Sum_probs=26.1
Q ss_pred eEEEEccCCCChh-hH-HHHHHHHhhCCceEEecCC
Q 021184 26 AVLFLHGFPELWY-SW-RKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 26 ~vv~~hG~~~~~~-~~-~~~~~~l~~~g~~v~~~d~ 59 (316)
++|++-|.++++- .+ ..+++.|.+.+++|+...-
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 5789999998775 33 5678888888888877654
No 469
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=21.54 E-value=1.7e+02 Score=22.44 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=24.4
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLR 60 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 60 (316)
.+++-|..+....-..+++.|+++|+.|++.+.+
T Consensus 7 ~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 7 IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 4667775543344456788899999999998764
No 470
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=21.42 E-value=2e+02 Score=20.46 Aligned_cols=49 Identities=18% Similarity=0.085 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCcceEEEEEechhHHHHHHHHHhCccccceeeeeccccc
Q 021184 81 GDLVGLLDEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFR 129 (316)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 129 (316)
.++.++++..+.+.+++.|.+.-+.+..-+...+-..++-+|+.+....
T Consensus 101 t~L~~~L~~~gi~~vil~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~ 149 (174)
T PF00857_consen 101 TDLDEILRKRGIDTVILCGVATDVCVLATARDAFDRGYRVIVVEDACAS 149 (174)
T ss_dssp SSHHHHHHHTTESEEEEEEESTTTHHHHHHHHHHHTT-EEEEEEEEEEB
T ss_pred ccccccccccccceEEEcccccCcEEehhHHHHHHCCCEEEEEChhhcC
Confidence 4688888889999999999888877655443333233566666665443
No 471
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=21.30 E-value=1.6e+02 Score=22.93 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=16.2
Q ss_pred EEEEechhHHHHHHHHHh
Q 021184 96 FLVGHDWGALIAWYFCLL 113 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~ 113 (316)
.+.|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 578999999999999886
No 472
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=21.30 E-value=1.9e+02 Score=23.36 Aligned_cols=51 Identities=12% Similarity=-0.015 Sum_probs=28.2
Q ss_pred cccccEEEEeeCCCcccCCCcchhhhhccCccccCCCceEEEEEcCCCcccccc-chHHHHHHHHHHHh
Q 021184 247 QIKIPVKFMVGDLDITYHIPGIREYIQNGGFKKDVPGLQEVIVMEGVAHFINQE-KADEVSSHIYDFIK 314 (316)
Q Consensus 247 ~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~~-~~~~~~~~i~~fl~ 314 (316)
.+++|++.++|..|+..-. -..++. .. .-+. +.++.+ .|+++.+.+.++|.
T Consensus 270 A~g~p~valfGpt~p~~~~-------------p~~~~~-~~-~~~~--~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 270 ALDRPNITLYGPTDPGLIG-------------GYGKNQ-HA-CRSP--GKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred HhCCCEEEEECCCCccccc-------------CCCCCc-ee-ecCC--CcccccCCHHHHHHHHHHHhh
Confidence 5788999999977653211 111122 11 1222 223322 68888888887763
No 473
>PRK06849 hypothetical protein; Provisional
Probab=21.30 E-value=5e+02 Score=21.80 Aligned_cols=61 Identities=11% Similarity=0.111 Sum_probs=38.1
Q ss_pred HHHHHHHHhhCCceEEecCCCCCCCCC---CCC-----CCCCCCHHHHHHHHHHHHHHhCcceEEEEEec
Q 021184 40 WRKQLLYLSSRGYRAIAPDLRGYGDTD---APP-----SITSYTALHVVGDLVGLLDEFGIEQVFLVGHD 101 (316)
Q Consensus 40 ~~~~~~~l~~~g~~v~~~d~~G~G~s~---~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 101 (316)
-..+++.|.+.|+.|++.|......+. ... .....+...+++.+.++++..++ .+++-+.+
T Consensus 17 ~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~i-d~vIP~~e 85 (389)
T PRK06849 17 ALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENI-DLLIPTCE 85 (389)
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCC-CEEEECCh
Confidence 346788899999999999876433221 000 00233567788888888887664 34444444
No 474
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=21.06 E-value=2.4e+02 Score=23.87 Aligned_cols=43 Identities=14% Similarity=0.086 Sum_probs=37.3
Q ss_pred CCCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCC
Q 021184 23 TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDT 65 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 65 (316)
.++++|-+--+|-+..+.....+.|.+.||.|++|.--|.|..
T Consensus 183 ~~kp~I~iTmfGvTTp~V~~~~~~Le~~G~Ev~VFHAtG~GG~ 225 (403)
T PF06792_consen 183 EDKPLIGITMFGVTTPCVDAIRERLEEEGYEVLVFHATGTGGR 225 (403)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHHhcCCeEEEEcCCCCchH
Confidence 3567888888888888888999999999999999999998854
No 475
>PLN02918 pyridoxine (pyridoxamine) 5'-phosphate oxidase
Probab=21.05 E-value=1.8e+02 Score=25.82 Aligned_cols=34 Identities=18% Similarity=-0.024 Sum_probs=28.9
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhCCceEEecC
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPD 58 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d 58 (316)
..|+++.|-|.|...-.-.+++|...||.|.++-
T Consensus 136 ~~VlVlcGpGNNGGDGLVaAR~L~~~G~~V~V~~ 169 (544)
T PLN02918 136 SRVLAICGPGNNGGDGLVAARHLHHFGYKPFVCY 169 (544)
T ss_pred CEEEEEECCCcCHHHHHHHHHHHHHCCCceEEEE
Confidence 4689999999998888788899999999887765
No 476
>KOG3179 consensus Predicted glutamine synthetase [Nucleotide transport and metabolism]
Probab=20.97 E-value=1.8e+02 Score=21.80 Aligned_cols=40 Identities=10% Similarity=0.126 Sum_probs=31.3
Q ss_pred CCCHHHHHHHHHHHHHHhCcceEEEEEechhHHHHHHHHH
Q 021184 73 SYTALHVVGDLVGLLDEFGIEQVFLVGHDWGALIAWYFCL 112 (316)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~ 112 (316)
..+-.+|+.-+..+++.+...+.-++|.|+|=.+..+++.
T Consensus 72 Af~d~dWI~KLcs~~kkld~mkkkvlGICFGHQiiara~G 111 (245)
T KOG3179|consen 72 AFSDADWIKKLCSFVKKLDFMKKKVLGICFGHQIIARAKG 111 (245)
T ss_pred ccccchHHHHHHHHHHHHHhhccceEEEeccHHHHHHhhC
Confidence 4456778888888888887667778999999988776543
No 477
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=20.93 E-value=1.2e+02 Score=22.86 Aligned_cols=16 Identities=31% Similarity=0.648 Sum_probs=13.3
Q ss_pred HHHHhhCCceEEecCC
Q 021184 44 LLYLSSRGYRAIAPDL 59 (316)
Q Consensus 44 ~~~l~~~g~~v~~~d~ 59 (316)
+..|+++|+.|+++|.
T Consensus 49 a~~LA~~G~~V~gvD~ 64 (213)
T TIGR03840 49 LAWLAEQGHRVLGVEL 64 (213)
T ss_pred HHHHHhCCCeEEEEeC
Confidence 4567788999999995
No 478
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=20.78 E-value=4.6e+02 Score=21.28 Aligned_cols=64 Identities=17% Similarity=0.232 Sum_probs=34.5
Q ss_pred CeEEEEccCCCChhhHHHHHHHHhhC-CceEEecCCCC------CCCCCCC---------------CCCCCCCHHHHHHH
Q 021184 25 PAVLFLHGFPELWYSWRKQLLYLSSR-GYRAIAPDLRG------YGDTDAP---------------PSITSYTALHVVGD 82 (316)
Q Consensus 25 ~~vv~~hG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G------~G~s~~~---------------~~~~~~~~~~~~~~ 82 (316)
+.+|++-|-.++.-. .++..|++. +..++..|-.- +|...+. .....++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 467777777665432 333444443 45677777531 1111110 00134677788888
Q ss_pred HHHHHHHh
Q 021184 83 LVGLLDEF 90 (316)
Q Consensus 83 ~~~~~~~~ 90 (316)
....++.+
T Consensus 82 a~~~i~~i 89 (307)
T PRK00091 82 ALAAIADI 89 (307)
T ss_pred HHHHHHHH
Confidence 88877765
No 479
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=20.75 E-value=5.2e+02 Score=21.88 Aligned_cols=64 Identities=14% Similarity=-0.057 Sum_probs=35.4
Q ss_pred CeEEEEccCC-CChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEE
Q 021184 25 PAVLFLHGFP-ELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVG 99 (316)
Q Consensus 25 ~~vv~~hG~~-~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
..++++.|-. .....+..+.+.|.+.|..+..+|-. . ...+.+ .++...+..+..+.+-|+-+|
T Consensus 50 ~~~lvv~~~~~~~~g~~~~v~~~L~~~gi~~~~~~~v-----~-----~~P~~~-~v~~~~~~~r~~~~D~IiavG 114 (395)
T PRK15454 50 KHLFVMADSFLHQAGMTAGLTRSLAVKGIAMTLWPCP-----V-----GEPCIT-DVCAAVAQLRESGCDGVIAFG 114 (395)
T ss_pred CEEEEEcCcchhhCccHHHHHHHHHHcCCeEEEECCC-----C-----CCcCHH-HHHHHHHHHHhcCcCEEEEeC
Confidence 3445554422 22345778888898888888777622 1 111233 355555666666666555554
No 480
>PRK05920 aromatic acid decarboxylase; Validated
Probab=20.73 E-value=3.8e+02 Score=20.21 Aligned_cols=62 Identities=18% Similarity=0.158 Sum_probs=34.1
Q ss_pred CCeEEEEccCCCChhhHHHHHHHHhhCCceEEecCCCCCCCCCCCCCCCCCCHHHHHHHH-HHHHHHhCcc
Q 021184 24 GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHVVGDL-VGLLDEFGIE 93 (316)
Q Consensus 24 ~~~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 93 (316)
+.+||+++-.......-...+..|.+.|+.|+-++.--++. ..+.+++++.+ ..+++.+|++
T Consensus 130 ~~pvvi~P~~m~~~~~~~~nl~~L~~~G~~ii~P~~g~y~~--------p~~~~~~~~f~~~~~l~~lg~~ 192 (204)
T PRK05920 130 RRKLILVPRETPLSLIHLENMLKLAEAGAIILPAIPAFYHK--------PQTIDDLVDFVVARILDLLGID 192 (204)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEeCCcccccCC--------CCCHHHHHHHHHHHHHHhcCCC
Confidence 34566666422222233555677888888887655322222 22556666644 3667777754
No 481
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=20.64 E-value=2.7e+02 Score=19.83 Aligned_cols=57 Identities=9% Similarity=0.214 Sum_probs=36.3
Q ss_pred EeeCCeeEEEEecCCCCeEEEEccCC-----CChhhHHHHHHHHhhCCceEEecCCCCCCCCC
Q 021184 9 VATNGINMHVASIGTGPAVLFLHGFP-----ELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTD 66 (316)
Q Consensus 9 ~~~~g~~i~~~~~g~~~~vv~~hG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~ 66 (316)
...+|..+.... =.|.+|+++.-.. -.......+.+...++|+.|+.+-.--++.-.
T Consensus 11 ~~~~G~~~~l~~-~~GkVlLIVNtASkCGfTpQYegLe~Ly~ky~~~Gf~VLgFPcNQF~~QE 72 (162)
T COG0386 11 KDIDGEPVSLSD-YKGKVLLIVNTASKCGFTPQYEGLEALYKKYKDKGFEVLGFPCNQFGGQE 72 (162)
T ss_pred eccCCCCccHHH-hCCcEEEEEEcccccCCcHhHHHHHHHHHHHhhCCcEEEeccccccccCC
Confidence 344665554332 2367888887543 33344566778888999999998776666443
No 482
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=20.60 E-value=61 Score=16.93 Aligned_cols=13 Identities=38% Similarity=0.555 Sum_probs=9.9
Q ss_pred eEEecCCCCCCCC
Q 021184 53 RAIAPDLRGYGDT 65 (316)
Q Consensus 53 ~v~~~d~~G~G~s 65 (316)
.+-+-|+||+|+-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 5667799999863
No 483
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=20.57 E-value=1.9e+02 Score=22.75 Aligned_cols=33 Identities=9% Similarity=-0.202 Sum_probs=24.3
Q ss_pred EEEEccCCCChhhHHHHHHHHhhCCceEEecCC
Q 021184 27 VLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDL 59 (316)
Q Consensus 27 vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 59 (316)
++++-|.+.+...-..+++.|++.|+.|+..+.
T Consensus 7 ~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r 39 (274)
T PRK08415 7 KGLIVGVANNKSIAYGIAKACFEQGAELAFTYL 39 (274)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 556777654445567788999999999988763
No 484
>PF08257 Sulfakinin: Sulfakinin family; InterPro: IPR013259 The sulfakinin (SK) family of neuropeptides have only been identified in crustaceans and insects. For most species there is the potential for producing two sulfakinin peptides, one has a short sulfakinin sequence. The function of the sulfakinins is difficult to assess. For the Periplaneta americana (American cockroach), various forms of the endogenous sulfakinins have been shown to be active on the hindgut, and also on the heart. In Calliphora vomitoria (Blue blowfly) the peptides act as neurotransmitters or neuromodulators, linking the brain with all thoracic and abdominal ganglia. In adults of Penaeus monodon (Penoeid shrimp) they appear to be restricted to a few neurones in the brain with a neural pathway extending along to the ventral thoracic and abdominal ganglia [].
Probab=20.35 E-value=40 Score=10.88 Aligned_cols=6 Identities=17% Similarity=0.545 Sum_probs=3.2
Q ss_pred cCCCcc
Q 021184 291 EGVAHF 296 (316)
Q Consensus 291 ~~~gH~ 296 (316)
++.||+
T Consensus 2 ~dyghm 7 (9)
T PF08257_consen 2 DDYGHM 7 (9)
T ss_pred Cccccc
Confidence 345665
No 485
>PRK02048 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Provisional
Probab=20.32 E-value=1.4e+02 Score=26.67 Aligned_cols=38 Identities=13% Similarity=0.139 Sum_probs=27.9
Q ss_pred ecCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEEe
Q 021184 56 APDLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVGH 100 (316)
Q Consensus 56 ~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 100 (316)
.+..||+|++ -+++++..+.+.+...++..-+|.++|.
T Consensus 518 yISCPsCGRT-------LfDLq~tta~Ik~~t~HLkGlkI~IMGC 555 (611)
T PRK02048 518 YISCPGCGRT-------LYDLQSTIARIKEATSHLKGLKIGIMGC 555 (611)
T ss_pred EEECCCCCcc-------hhhHHHHHHHHHHHhCCCCCceEEEEEe
Confidence 3445677764 4578888888888888887778888764
No 486
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B ....
Probab=20.31 E-value=4.2e+02 Score=20.55 Aligned_cols=63 Identities=13% Similarity=0.106 Sum_probs=42.8
Q ss_pred cCCCChhhHHHHHHHHhhCCceEEec-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCcceEEEEE
Q 021184 32 GFPELWYSWRKQLLYLSSRGYRAIAP-DLRGYGDTDAPPSITSYTALHVVGDLVGLLDEFGIEQVFLVG 99 (316)
Q Consensus 32 G~~~~~~~~~~~~~~l~~~g~~v~~~-d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 99 (316)
|+|.+.....+.++.+.+.|..-+.+ |. .+|. . .. .-.+.+++++-|...++......++|++
T Consensus 79 GyG~~~~~v~~tv~~~~~aG~agi~IEDq-~~~~-~-~~--~l~~~ee~~~kI~Aa~~a~~~~~~~I~A 142 (238)
T PF13714_consen 79 GYGNDPENVARTVRELERAGAAGINIEDQ-RCGH-G-GK--QLVSPEEMVAKIRAAVDARRDPDFVIIA 142 (238)
T ss_dssp TSSSSHHHHHHHHHHHHHCT-SEEEEESB-STTT-S-TT---B--HHHHHHHHHHHHHHHSSTTSEEEE
T ss_pred ccCchhHHHHHHHHHHHHcCCcEEEeecc-ccCC-C-CC--ceeCHHHHHHHHHHHHHhccCCeEEEEE
Confidence 56666888888899999999876666 55 4442 1 11 3558999999999999887655566665
No 487
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=20.24 E-value=73 Score=26.26 Aligned_cols=19 Identities=21% Similarity=0.291 Sum_probs=16.5
Q ss_pred EEEEechhHHHHHHHHHhC
Q 021184 96 FLVGHDWGALIAWYFCLLR 114 (316)
Q Consensus 96 ~l~G~S~Gg~~a~~~a~~~ 114 (316)
.+.|-|.||.+|+.++...
T Consensus 46 liaGTStGgiiA~~la~~~ 64 (349)
T cd07214 46 VIAGTSTGGLITAMLTAPN 64 (349)
T ss_pred EEeeCCHHHHHHHHHhcCC
Confidence 6789999999999998753
No 488
>PLN02154 carbonic anhydrase
Probab=20.14 E-value=1.8e+02 Score=23.29 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhCcceEEEEEechhHHHHHHH
Q 021184 79 VVGDLVGLLDEFGIEQVFLVGHDWGALIAWYF 110 (316)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~ 110 (316)
....+.-.+..++.+.|+++|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQVENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCCCEEEEecCCCchHHHHHH
Confidence 45567777888999999999999655544433
No 489
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=20.13 E-value=1.5e+02 Score=23.94 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=19.8
Q ss_pred CCCeEEEEccCCCChhhHH--HHHHHHhhCC
Q 021184 23 TGPAVLFLHGFPELWYSWR--KQLLYLSSRG 51 (316)
Q Consensus 23 ~~~~vv~~hG~~~~~~~~~--~~~~~l~~~g 51 (316)
++|.++-+||++|+.-.|- -+++.+-..|
T Consensus 108 ~KPLvLSfHG~tGTGKN~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 108 RKPLVLSFHGWTGTGKNYVAEIIAENLYRGG 138 (344)
T ss_pred CCCeEEEecCCCCCchhHHHHHHHHHHHhcc
Confidence 4789999999999876652 2344444444
Done!