Query 021185
Match_columns 316
No_of_seqs 130 out of 151
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 14:00:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z86_A Chondroitin synthase; G 87.8 1.8 6.2E-05 42.4 8.9 216 17-237 93-335 (625)
2 1qg8_A Protein (spore coat pol 85.4 1.3 4.5E-05 37.4 5.6 120 92-233 87-215 (255)
3 1xhb_A Polypeptide N-acetylgal 84.4 1.8 6.2E-05 40.9 6.7 139 92-236 113-262 (472)
4 2ffu_A Ppgalnact-2, polypeptid 79.7 2.4 8E-05 40.7 5.7 210 16-233 65-291 (501)
5 4fix_A UDP-galactofuranosyl tr 68.1 11 0.00036 38.6 7.4 37 93-129 268-305 (657)
6 3bcv_A Putative glycosyltransf 66.6 4.1 0.00014 33.8 3.4 109 16-129 4-120 (240)
7 2d7i_A Polypeptide N-acetylgal 61.5 22 0.00074 35.1 7.9 212 16-235 111-341 (570)
8 3f1y_A Mannosyl-3-phosphoglyce 60.7 10 0.00035 36.1 5.3 197 16-233 93-310 (387)
9 2bo4_A Mannosylglycerate synth 40.3 30 0.001 33.3 4.9 183 19-226 2-211 (397)
10 2c0n_A A197; thermophil protei 36.9 12 0.00041 33.8 1.4 38 82-126 45-85 (203)
11 4hg6_A Cellulose synthase subu 34.3 27 0.00092 36.2 3.7 127 92-233 237-369 (802)
12 2z86_A Chondroitin synthase; G 31.5 59 0.002 31.7 5.5 107 17-128 375-490 (625)
13 2nxv_A ATP synthase subunits r 29.4 32 0.0011 29.7 2.9 29 92-120 73-101 (249)
14 3l7i_A Teichoic acid biosynthe 28.0 12 0.00043 37.7 0.0 37 91-127 81-117 (729)
15 1o7q_A N-acetyllactosaminide a 25.7 1.1E+02 0.0038 28.9 6.0 89 17-106 49-151 (289)
16 4dix_A Plectin-related protein 22.4 60 0.0021 29.7 3.4 38 32-77 106-143 (230)
17 1omz_A Alpha-1,4-N-acetylhexos 21.9 43 0.0015 31.5 2.4 102 18-121 29-134 (293)
No 1
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=87.80 E-value=1.8 Score=42.38 Aligned_cols=216 Identities=13% Similarity=0.127 Sum_probs=100.4
Q ss_pred CCcEEEEEecccchhhHHHHHhhC----CCCCcEEEEEEecCccccccc-cc-ccC-ceeEEEeecccchhhhccccCcc
Q 021185 17 PMNLLAIAAGIKQKKIVDQIVRKF----PSKDFVVMLFHYDGVVDEWKD-LV-WAD-RAIHVSAANQTKWWFAKRFLHPD 89 (316)
Q Consensus 17 ~k~Ll~~~VG~kqk~~vd~~v~kf----~~~nF~v~LfhYDg~vd~w~d-~e-ws~-~aiHv~a~kqtKWw~akRfLHPd 89 (316)
++.-|++|+=.. ...+...+... ...++.|+++. ||..|+=.+ ++ +.+ ..+++........-.+...-.-=
T Consensus 93 p~vsviIp~~n~-~~~l~~~l~sl~~q~~~~~~eiivvD-d~s~d~t~~~~~~~~~~~~i~~i~~~~~~~g~~~a~N~g~ 170 (625)
T 2z86_A 93 DGLSIVIPTYNR-AKILAITLACLCNQKTIYDYEVIVAD-DGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGL 170 (625)
T ss_dssp CCEEEEEEESSC-HHHHHHHHHHHHTCCCSSCEEEEEEE-ESCSSCHHHHHHTTTTTSCEEEEEECCCSCCHHHHHHHHH
T ss_pred CcEEEEEecCCc-HHHHHHHHHHHHhhccCCCeEEEEEe-CCCchhHHHHHHHhhhcCCeEEEEeCCCCcchhHHHHHHH
Confidence 345566666433 34444444432 22378887776 677664322 11 111 12333333221111111100111
Q ss_pred ccccccEEEEecccccCCCCCHHHHHHHHHHhC-CcccCCCcCCCCCccccc------cceec-cC----cccceeeecc
Q 021185 90 IVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEG-LEISQPALDPVKSEVHHP------ITARR-RN----SKAHRRMYKY 157 (316)
Q Consensus 90 iv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~g-LeISQPALd~~s~~~sh~------iT~r~-~~----~~vHr~~~~~ 157 (316)
-.+.+|||++.|+|..++...+.++++.+.+.. .-+.+|..-...+..... -..+. +. ..+.......
T Consensus 171 ~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (625)
T 2z86_A 171 RAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQN 250 (625)
T ss_dssp HHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------------
T ss_pred HhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccC
Confidence 135789999999999999999999999998743 444444321111000000 00000 00 0000000000
Q ss_pred cCCCC------CC-CCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccch-hhHHhhhhhcCCCCCcEEEEeeceE
Q 021185 158 KGSGR------CD-DYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG-LDIQLGYCAQGDRTKNVGVVDSEYI 229 (316)
Q Consensus 158 ~~~~~------C~-~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWG-LD~~w~~c~~g~~~~kiGVVDa~~V 229 (316)
.+..+ .. ..........++=..+=+|+|+++..+ ..+ +....+|| =|+-+..-+. ..+.++.++....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~i-Ggf-de~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v 327 (625)
T 2z86_A 251 KSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRA-GWF-DEEFTHWGGEDNEFGYRLY-REGCYFRSVEGAMA 327 (625)
T ss_dssp -CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHH-CCC-CTTCSSCCCHHHHHHHHHH-HTTCEEEECGGGCE
T ss_pred CccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHh-CCC-ccccccCCcchhhhhhhHH-hCCceEEEcccchh
Confidence 00000 00 000000111233334557899999988 333 45555664 5665543332 23469999999999
Q ss_pred EEccCCCC
Q 021185 230 VHLGLPTL 237 (316)
Q Consensus 230 ~H~~~ptl 237 (316)
.|...++.
T Consensus 328 ~H~~~~~~ 335 (625)
T 2z86_A 328 YHQEPPGK 335 (625)
T ss_dssp EEECCC--
T ss_pred hccCCccc
Confidence 99976543
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=85.36 E-value=1.3 Score=37.40 Aligned_cols=120 Identities=8% Similarity=-0.080 Sum_probs=68.1
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCCcC----CCCCccccccceeccCcccceeeecccCCCCCCCC
Q 021185 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPALD----PVKSEVHHPITARRRNSKAHRRMYKYKGSGRCDDY 166 (316)
Q Consensus 92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~-gLeISQPALd----~~s~~~sh~iT~r~~~~~vHr~~~~~~~~~~C~~~ 166 (316)
+..|||++.|+|..++...+.++++.+++. +..+..+... ...+...+.. . .+...+. .
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~----------~---- 150 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKET-V-RPAAQVT----------W---- 150 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEE-E-ECCCSCB----------S----
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhc-c-CchHHHH----------H----
Confidence 578999999999999999999999999876 6666665432 1111111110 0 0000000 0
Q ss_pred CCCCCccceEEEecccccHHHHHHHhhhh---cC-CCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185 167 STAPPCIGWVEMMAPVFSRAAWRCAWYMI---QN-DLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 233 (316)
Q Consensus 167 ~~~ppcTgFVEiMaPVFSR~Awrcvw~mi---qN-dlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~ 233 (316)
....++-..+=+|+|++++.+=..+ .+ +.....+-|+.+...+.. .+ ++..++...+.|+.
T Consensus 151 ----~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~-~g-~~~~~~~~~~~~r~ 215 (255)
T 1qg8_A 151 ----NAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH-FY-PFYPLDEELDLNYI 215 (255)
T ss_dssp ----CCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT-TC-CBEEEEEEEEEEEE
T ss_pred ----hhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH-hC-CEEEecCcEEEEEE
Confidence 0011122234578999999873112 11 222334567766544432 23 69999998888875
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=84.39 E-value=1.8 Score=40.93 Aligned_cols=139 Identities=15% Similarity=0.088 Sum_probs=70.9
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCC-CCccccc----cceeccCcccceeeecccC---CCCC
Q 021185 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPV-KSEVHHP----ITARRRNSKAHRRMYKYKG---SGRC 163 (316)
Q Consensus 92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~-s~~~sh~----iT~r~~~~~vHr~~~~~~~---~~~C 163 (316)
+..|||++.|+|..++..-++++++.+++..-.+.-|.++.- ...+.+. .+...-...++........ ..+-
T Consensus 113 A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (472)
T 1xhb_A 113 SRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRK 192 (472)
T ss_dssp CCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTT
T ss_pred ccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhccc
Confidence 568999999999999999999999999887665655654210 0011110 0000000000000000000 0000
Q ss_pred CCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccch---hhHHhhhhhcCCCCCcEEEEeeceEEEccCCC
Q 021185 164 DDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWG---LDIQLGYCAQGDRTKNVGVVDSEYIVHLGLPT 236 (316)
Q Consensus 164 ~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWG---LD~~w~~c~~g~~~~kiGVVDa~~V~H~~~pt 236 (316)
. ....+-.+.++-..+=+|+|+++..+= . ++.....|| +|+.+.-... +.+|.++....|.|....+
T Consensus 193 ~-~~~~~~~~~~~~g~~~~irr~~~~~iG-g-fde~~~~~g~ED~dl~~R~~~~---G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 193 G-DRTLPVRTPTMAGGLFSIDRDYFQEIG-T-YDAGMDIWGGENLEISFRIWQC---GGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp T-CTTSCEECSBCCSSSEEEEHHHHHHTT-S-CCTTSCTTCCCCSHHHHHHHHT---TCEEEEEEEEEEEEEC---
T ss_pred C-CCCCcccCccccceeEEEEHHHHHHcC-C-CCCcccccCchhHHHHHHHHhc---CCeEEEccCcEEEEEccCc
Confidence 0 000011111111222357999999882 2 355556674 3444443333 4689999999999987543
No 4
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=79.71 E-value=2.4 Score=40.73 Aligned_cols=210 Identities=11% Similarity=0.110 Sum_probs=100.1
Q ss_pred CCCcEEEEEecccch----hhHHHHHhhCCCCC--cEEEEEEecCccccc-c-cccccCceeEEEeecccchhhhccccC
Q 021185 16 PPMNLLAIAAGIKQK----KIVDQIVRKFPSKD--FVVMLFHYDGVVDEW-K-DLVWADRAIHVSAANQTKWWFAKRFLH 87 (316)
Q Consensus 16 ~~k~Ll~~~VG~kqk----~~vd~~v~kf~~~n--F~v~LfhYDg~vd~w-~-d~ews~~aiHv~a~kqtKWw~akRfLH 87 (316)
.++.-|++|+=.... ..++.++..-. .+ +.|+|+. ||+.|+= . .++-. .-|++.......= ++.-...
T Consensus 65 ~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~-~~~~~EIIvVD-DgS~D~t~~~~~~~~-~~v~vi~~~~n~G-~~~A~N~ 140 (501)
T 2ffu_A 65 LPATSVVITFHNEARSALLRTVVSVLKKSP-PHLIKEIILVD-DYSNDPEDGALLGKI-EKVRVLRNDRREG-LMRSRVR 140 (501)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHSC-GGGEEEEEEEE-CSCSCTHHHHGGGGB-TTEEEEECSSCCH-HHHHHHH
T ss_pred CCCEEEEEEeCcCcHHHHHHHHHHHHhhCc-hhhceeEEEEE-CCCCchHHHHHHhcC-CCEEEEECCCCcC-HHHHHHH
Confidence 345567777754433 23555555432 33 4666554 6776642 1 12111 1233332211110 1111111
Q ss_pred ccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCC-Cccccccc---eecc-Cccccee-eecccC--
Q 021185 88 PDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVK-SEVHHPIT---ARRR-NSKAHRR-MYKYKG-- 159 (316)
Q Consensus 88 Pdiv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s-~~~sh~iT---~r~~-~~~vHr~-~~~~~~-- 159 (316)
-=-.+..|||++.|+|..++...+.++++.+++..-.+..|.++.-. ..+.+.-. .+.. ...++.. .+....
T Consensus 141 G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (501)
T 2ffu_A 141 GADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTPEQR 220 (501)
T ss_dssp HHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCHHHH
T ss_pred HHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCHHHH
Confidence 11235789999999999999999999999999887777777652110 00111000 0000 0000000 000000
Q ss_pred CCCCCCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccc-hhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185 160 SGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 233 (316)
Q Consensus 160 ~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGW-GLD~~w~~c~~g~~~~kiGVVDa~~V~H~~ 233 (316)
..+-. ....+-.+.++-.-+=+|+|+++..+= .++.....| |-|+-+..-+. ..+.+|.++....|.|..
T Consensus 221 ~~~~~-~~~~~~~~~~~~g~~~~irr~~~~~iG--gfde~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~ 291 (501)
T 2ffu_A 221 RSRQG-NPVAPIKTPMIAGGLFVMDKFYFEELG--KYDMMMDVWGGENLEISFRVW-QCGGSLEIIPCSRVGHVF 291 (501)
T ss_dssp HHTSS-CTTSCEECSSCCSSSEEEEHHHHHHTT--CCCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECC
T ss_pred hhccC-CCCCcccCccccceEEEEEHHHHHHhC--CCCccccccCcchHHHHHHHH-hcCCeEEEccCcEEEEEc
Confidence 00000 000010111111123378999999883 235555667 44554432221 124689999999999974
No 5
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=68.14 E-value=11 Score=38.57 Aligned_cols=37 Identities=19% Similarity=0.200 Sum_probs=31.0
Q ss_pred cccEEEEecccccCCCCCHHHHHHHHHHh-CCcccCCC
Q 021185 93 EYNYIFLWDEDIGVENFNPRRYLSIVKDE-GLEISQPA 129 (316)
Q Consensus 93 ~YDYIflwDDDL~vd~f~i~ry~~ivr~~-gLeISQPA 129 (316)
.+|||+|.|+|..++...+.++++.++.. ...+..|.
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~ 305 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQ 305 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEE
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeE
Confidence 68999999999999999999999999876 34455554
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=66.59 E-value=4.1 Score=33.83 Aligned_cols=109 Identities=18% Similarity=0.104 Sum_probs=59.7
Q ss_pred CCCcEEEEEecccchhhHHHHHhhC---CCCCcEEEEEEecCcccccccc--ccc--CceeEEEe-ecccchhhhccccC
Q 021185 16 PPMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKDL--VWA--DRAIHVSA-ANQTKWWFAKRFLH 87 (316)
Q Consensus 16 ~~k~Ll~~~VG~kqk~~vd~~v~kf---~~~nF~v~LfhYDg~vd~w~d~--ews--~~aiHv~a-~kqtKWw~akRfLH 87 (316)
.++.-|++|+=. ....+..+++-. ...+|.|++.. ||+.|+=.++ ++. ..-|.+.. .+..+=- +.. .
T Consensus 4 ~p~vsViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiIvvD-d~S~d~t~~~~~~~~~~~~~i~~i~~~n~G~~~-a~N--~ 78 (240)
T 3bcv_A 4 IPKVSVIVPIYN-VEKYLDQCVQALLAQTLSDIEIILID-DESPDNCPKICDDYAAQYPNIKVIHKKNAGLGM-ACN--S 78 (240)
T ss_dssp CCSEEEEEEESS-CTTTHHHHHHHHHTCSSSSEEEEEEE-CCCSSSHHHHHHHHHHHCSSEEEEECCCCCHHH-HHH--H
T ss_pred CCcEEEEEecCC-CHHHHHHHHHHHHhCcCCCeEEEEEE-CCCCcCHHHHHHHHHhhCCCEEEEECCCCChHH-HHH--H
Confidence 345667777743 334444443322 12467777664 7776642211 011 11133322 2222110 110 0
Q ss_pred ccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCC
Q 021185 88 PDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPA 129 (316)
Q Consensus 88 Pdiv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPA 129 (316)
-=-.+..|||++.|+|..++...++++++.+++.+.++...+
T Consensus 79 g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~ 120 (240)
T 3bcv_A 79 GLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTG 120 (240)
T ss_dssp HHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC-
T ss_pred HHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 011246799999999999999999999999998777766544
No 7
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=61.51 E-value=22 Score=35.09 Aligned_cols=212 Identities=10% Similarity=0.025 Sum_probs=100.9
Q ss_pred CCCcEEEEEecccc----hhhHHHHHhhCCCCC--cEEEEEEecCccccc-cc-cc-cc--CceeEEEeecccchhhhcc
Q 021185 16 PPMNLLAIAAGIKQ----KKIVDQIVRKFPSKD--FVVMLFHYDGVVDEW-KD-LV-WA--DRAIHVSAANQTKWWFAKR 84 (316)
Q Consensus 16 ~~k~Ll~~~VG~kq----k~~vd~~v~kf~~~n--F~v~LfhYDg~vd~w-~d-~e-ws--~~aiHv~a~kqtKWw~akR 84 (316)
.++.-|+||+=... ...++.++..- ..+ |.|+|+ =||+.|+= .+ ++ +. ..-|++....... =++.-
T Consensus 111 ~P~vSVIIp~yNe~~~~L~~~L~Sll~qt-~~~~~~EIIVV-DDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~-G~~~A 187 (570)
T 2d7i_A 111 LPNTSIIIPFHNEGWSSLLRTVHSVLNRS-PPELVAEIVLV-DDFSDREHLKKPLEDYMALFPSVRILRTKKRE-GLIRT 187 (570)
T ss_dssp CCCEEEEEEESSCCHHHHHHHHHHHHHHS-CGGGEEEEEEE-ECSCCCGGGTHHHHHHHTTSTTEEEEECSSCC-CHHHH
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHhcC-CccCcEEEEEE-ECCCCcHHHHHHHHHHHHhCCeEEEEECCCCC-CHHHH
Confidence 45667777775544 23455555542 234 366655 47776654 21 11 10 1124443322111 01111
Q ss_pred ccCccccccccEEEEecccccCCCCCHHHHHHHHHHhCCcccCCCcCCCCC-ccccccc----eecc-Ccccceeeeccc
Q 021185 85 FLHPDIVAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQPALDPVKS-EVHHPIT----ARRR-NSKAHRRMYKYK 158 (316)
Q Consensus 85 fLHPdiv~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQPALd~~s~-~~sh~iT----~r~~-~~~vHr~~~~~~ 158 (316)
...-=-.+.-|||+|.|+|..++..-++++++.+++..--+..|.++.-.+ .+.+... .+.. ...+..... ..
T Consensus 188 ~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 266 (570)
T 2d7i_A 188 RMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRI-PI 266 (570)
T ss_dssp HHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEE-CC
T ss_pred HHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCccccccccccccccc-cc
Confidence 111112356799999999999999999999999987654444454321000 0111100 0000 000000000 00
Q ss_pred CCC-CCCCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccc-hhhHHhhhhhcCCCCCcEEEEeeceEEEccCC
Q 021185 159 GSG-RCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAW-GLDIQLGYCAQGDRTKNVGVVDSEYIVHLGLP 235 (316)
Q Consensus 159 ~~~-~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGW-GLD~~w~~c~~g~~~~kiGVVDa~~V~H~~~p 235 (316)
... .-. ....+..+.++-.-+=+|+|+++..+ .. +++....| |=|+-+..-+. ..+.+|.++....|.|....
T Consensus 267 ~~~~~~~-~~~~~~~~~~~~g~~~~irr~~~~~i-Gg-fDe~~~~~g~ED~dl~~Rl~-~~G~~i~~~p~~~v~H~~r~ 341 (570)
T 2d7i_A 267 PPELQKA-DPSDPFESPVMAGGLFAVDRKWFWEL-GG-YDPGLEIWGGEQYEISFKVW-MCGGRMEDIPCSRVGHIYRK 341 (570)
T ss_dssp CTTTCCS-STTSCEECSSCCSSSEEEEHHHHHHT-TS-SCTTCCSSSSHHHHHHHHHH-HTTCEEEEEEEEEEEECCCS
T ss_pred chhhhcc-CCCcceecccccceEEEEEHHHHHhc-CC-CCCcccccCcchHHHHHHHH-hCCCeEEEccCeEEEEEccc
Confidence 000 000 00011111122222346899999988 32 35566667 44555532221 13468999999999997543
No 8
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=60.71 E-value=10 Score=36.07 Aligned_cols=197 Identities=10% Similarity=0.016 Sum_probs=96.8
Q ss_pred CCCcEEEEEecccchhhHHHHHhhCC------CCCcEEEEEEecCccccccccc--ccCceeEEE------eecccchhh
Q 021185 16 PPMNLLAIAAGIKQKKIVDQIVRKFP------SKDFVVMLFHYDGVVDEWKDLV--WADRAIHVS------AANQTKWWF 81 (316)
Q Consensus 16 ~~k~Ll~~~VG~kqk~~vd~~v~kf~------~~nF~v~LfhYDg~vd~w~d~e--ws~~aiHv~------a~kqtKWw~ 81 (316)
.++..|++|+=.. ..++..+|+... ..+|.|++.. ||+.|+=.++- ...+.++.. ..+..|-.-
T Consensus 93 ~p~vSVVIP~yNe-~~~l~~~l~sl~~~l~~~~~~~EIIVVD-DgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A 170 (387)
T 3f1y_A 93 GLTVSAVLPSRNV-ADTVGGIIDEIHALNERAPLIDQILVVD-ADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDA 170 (387)
T ss_dssp TCCEEEEEEESSC-TTTHHHHHHHHHHHHHHSCCCSEEEEEE-CSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHH
T ss_pred CCeEEEEEEcCCC-HHHHHHHHHHHHHHHhcCCCCeEEEEEc-CcCCccHHHHHHHhCchhcccceeEecCCccCCHHHH
Confidence 4667888888554 444444444321 2467776655 88877643321 111111100 013333111
Q ss_pred hccccCccccccccEEEEeccccc-CCCCCHHHHHHHHHHh-CCcccCCCcCCCCCccccccceeccCcccce----eee
Q 021185 82 AKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDE-GLEISQPALDPVKSEVHHPITARRRNSKAHR----RMY 155 (316)
Q Consensus 82 akRfLHPdiv~~YDYIflwDDDL~-vd~f~i~ry~~ivr~~-gLeISQPALd~~s~~~sh~iT~r~~~~~vHr----~~~ 155 (316)
.+.-+ -.+.+|||++.|.|.. ++...+.++++.+.+. +..+......... ....... +.....+-+ ..+
T Consensus 171 ~n~G~---~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~-~~~~~~~-~~~~g~v~~~~~~~l~ 245 (387)
T 3f1y_A 171 MWRAL---SVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPF-RKGESIE-EDGGGRVTELTAKPLF 245 (387)
T ss_dssp HHHHT---TTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC--------C-CBCCSHHHHHTHHHHH
T ss_pred HHHHH---HhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeecccc-ccccccc-cccCCchhhhhHHHHH
Confidence 11111 1257999999999999 8999999999988765 5666555432110 0000000 000000000 000
Q ss_pred cccCCCCCCCCCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhh-hhhcCCCCCcEEEEeeceEEEcc
Q 021185 156 KYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLG-YCAQGDRTKNVGVVDSEYIVHLG 233 (316)
Q Consensus 156 ~~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~-~c~~g~~~~kiGVVDa~~V~H~~ 233 (316)
+.--+..+ ...-+.+||. +|+|++++.+ . + ..|||.|..+- +++....-++|.=|+-.+..|..
T Consensus 246 ~~~~~~l~---~~~d~~sG~~-----a~rR~~l~~i-~-f----~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 246 NLFYPELA---GFVQPLAGEF-----VADRELFCSI-P-F----LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp HHHCGGGT---TCSCTTCSCE-----EEEHHHHTTS-C-E----ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred HHHhHhhc---cccccccccE-----EEEHHHHHhC-C-C----CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 00000000 0111234442 6899999876 2 2 37899888773 33221112348888877776654
No 9
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=40.27 E-value=30 Score=33.28 Aligned_cols=183 Identities=11% Similarity=0.059 Sum_probs=96.9
Q ss_pred cEEEEEecccchhhHHHHHhhCC----CCCcEEEEEEecCcccccccc-c-----c----cCceeEEEee-----cccc-
Q 021185 19 NLLAIAAGIKQKKIVDQIVRKFP----SKDFVVMLFHYDGVVDEWKDL-V-----W----ADRAIHVSAA-----NQTK- 78 (316)
Q Consensus 19 ~Ll~~~VG~kqk~~vd~~v~kf~----~~nF~v~LfhYDg~vd~w~d~-e-----w----s~~aiHv~a~-----kqtK- 78 (316)
+||++|+ .. +++..++.... ..++.|++.. ||++|+=.+. + . ..+.+..... +..|
T Consensus 2 slVIiP~-~e--E~I~~vl~~l~~~~~~~~~EIIVVD-DGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG 77 (397)
T 2bo4_A 2 SLVVFPF-KH--EHPEVLLHNVRVAAAHPRVHEVLCI-GYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKG 77 (397)
T ss_dssp CEEEEEC-CS--SCHHHHHHHHHHHHHSTTCCEEEEE-ESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHH
T ss_pred cEEEEeC-Cc--cCHHHHHHHHHHhccCCCeEEEEEE-CcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHH
Confidence 6888887 32 46666665421 2467775555 8888863322 1 1 1123333222 4455
Q ss_pred ---hhhhccccCccccccccEEEEeccccc-CCCCCHHHHHHHHHHhCCcccCCCcCC--CCCccccccceeccCcccce
Q 021185 79 ---WWFAKRFLHPDIVAEYNYIFLWDEDIG-VENFNPRRYLSIVKDEGLEISQPALDP--VKSEVHHPITARRRNSKAHR 152 (316)
Q Consensus 79 ---Ww~akRfLHPdiv~~YDYIflwDDDL~-vd~f~i~ry~~ivr~~gLeISQPALd~--~s~~~sh~iT~r~~~~~vHr 152 (316)
+-.++.-+ -.+.+|||.+.|-|+. .+...+.++++.+.+ |.++.-+.... ..|.+.+.+. |. +-+
T Consensus 78 ~Al~~G~~~Al---~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~~~~~~~~~-~~----ll~ 148 (397)
T 2bo4_A 78 DGMNTALRYFL---EETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTDAMITWMIT-RT----GFA 148 (397)
T ss_dssp HHHHHHHHHHH---HHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTSCHHHHHTH-HH----HHH
T ss_pred HHHHHHHHHHH---HhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCCcHHHHHHH-HH----HHH
Confidence 22221000 1357999999999996 899999999998754 66666554221 1112222111 00 000
Q ss_pred eeecccCCCCCCCCCCCCCccceEEEecccccHHHHHHHhhh-hcCCCcccchhhHHhhhhhcCCCCCcEEEEee
Q 021185 153 RMYKYKGSGRCDDYSTAPPCIGWVEMMAPVFSRAAWRCAWYM-IQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDS 226 (316)
Q Consensus 153 ~~~~~~~~~~C~~~~~~ppcTgFVEiMaPVFSR~Awrcvw~m-iqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa 226 (316)
..|+- ..|. ....| -+||. +|+|++++.+... +.. ..+|||.|..+...+.. .+.+|.-|.-
T Consensus 149 ~~~~~---~~~~-~i~dp-~sG~~-----a~~R~vl~~l~~~~~~~-~~~~fg~eiel~~~a~~-~G~rI~EVpi 211 (397)
T 2bo4_A 149 LLWPH---TELS-WIEQP-LGGEL-----LMRREVAAMLYEDERVR-RRSDWGIDTLYTFVTVQ-QGVSIYECYI 211 (397)
T ss_dssp HHCTT---SSGG-GCSCT-TCCCE-----EEEHHHHHHHHHCHHHH-TCCSTTHHHHHHHHHHH-TTCCEEEEEC
T ss_pred HHHHH---hhcc-ccccC-CcccE-----EEeHHHHHHHhhhcccC-cCCCcchHHHHHHHHHH-cCCEEEEEEC
Confidence 01100 0111 11122 34554 5999999876321 112 56899999988766532 3467877653
No 10
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=36.91 E-value=12 Score=33.83 Aligned_cols=38 Identities=24% Similarity=0.483 Sum_probs=28.1
Q ss_pred hccccCccccccccEEEEeccc---ccCCCCCHHHHHHHHHHhCCccc
Q 021185 82 AKRFLHPDIVAEYNYIFLWDED---IGVENFNPRRYLSIVKDEGLEIS 126 (316)
Q Consensus 82 akRfLHPdiv~~YDYIflwDDD---L~vd~f~i~ry~~ivr~~gLeIS 126 (316)
+.+||- -..|||+++.|-| ++.+..++-|++ +.|.+|.
T Consensus 45 v~~Fl~---~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV 85 (203)
T 2c0n_A 45 LDMFLE---MKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVV 85 (203)
T ss_dssp HHHHHH---CTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEE
T ss_pred HHHHHh---cCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEE
Confidence 445552 2369999999999 998888888888 5566654
No 11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=34.26 E-value=27 Score=36.20 Aligned_cols=127 Identities=13% Similarity=0.044 Sum_probs=67.9
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHH-HhCCcccCCCcCCCCCc-cccccce-e---ccCcccceeeecccCCCCCCC
Q 021185 92 AEYNYIFLWDEDIGVENFNPRRYLSIVK-DEGLEISQPALDPVKSE-VHHPITA-R---RRNSKAHRRMYKYKGSGRCDD 165 (316)
Q Consensus 92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr-~~gLeISQPALd~~s~~-~sh~iT~-r---~~~~~vHr~~~~~~~~~~C~~ 165 (316)
+.+|||++.|+|..++...+.++++.+. ..+..+.|......... +...... . .....++........ ..
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 312 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLD-RW--- 312 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHH-HT---
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHh-hc---
Confidence 4799999999999999999999999995 44666666533211100 0000000 0 000001100000000 00
Q ss_pred CCCCCCccceEEEecccccHHHHHHHhhhhcCCCcccchhhHHhhhhhcCCCCCcEEEEeeceEEEcc
Q 021185 166 YSTAPPCIGWVEMMAPVFSRAAWRCAWYMIQNDLIHAWGLDIQLGYCAQGDRTKNVGVVDSEYIVHLG 233 (316)
Q Consensus 166 ~~~~ppcTgFVEiMaPVFSR~Awrcvw~miqNdlvhGWGLD~~w~~c~~g~~~~kiGVVDa~~V~H~~ 233 (316)
..+ ++...+=+|+|++++.+ ..+..+ ..+=|+.+...+. ..+.+++.++...+.|..
T Consensus 313 --~~~----~~~G~~~~~Rr~al~~v-Ggf~~~---~~~ED~~l~~rl~-~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 313 --GGA----FFCGSAAVLRRRALDEA-GGFAGE---TITEDAETALEIH-SRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp --TCC----CCCSSSEEEEHHHHHHH-TTCCCS---SSSHHHHHHHHHH-TTTCCEEECCCCCEEECC
T ss_pred --CCc----eecccchhhhHHHHHHc-CCcCCC---CcchHHHHHHHHH-HcCCeEEEecCCEEEecC
Confidence 000 11233447899999987 223222 2357888875554 245689988877777653
No 12
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=31.48 E-value=59 Score=31.65 Aligned_cols=107 Identities=18% Similarity=0.071 Sum_probs=55.1
Q ss_pred CCcEEEEEecccchhhHHHHHhhC---CCCCcEEEEEEecCccccccc-c-cc--cCceeEEE-eecccchhhhccccCc
Q 021185 17 PMNLLAIAAGIKQKKIVDQIVRKF---PSKDFVVMLFHYDGVVDEWKD-L-VW--ADRAIHVS-AANQTKWWFAKRFLHP 88 (316)
Q Consensus 17 ~k~Ll~~~VG~kqk~~vd~~v~kf---~~~nF~v~LfhYDg~vd~w~d-~-ew--s~~aiHv~-a~kqtKWw~akRfLHP 88 (316)
++.-|++++= +....+...++-. .-.+|.|++.. ||+.|+=.+ + ++ ...-|++. ..+..+-.-.+ .-
T Consensus 375 ~~vsiii~~y-n~~~~l~~~l~s~~~q~~~~~eiivvd-d~S~d~t~~~~~~~~~~~~~i~~~~~~n~G~~~a~n---~g 449 (625)
T 2z86_A 375 PLVSIYIPAY-NCSKYIVRCVESALNQTITDLEVCICD-DGSTDDTLRILQEHYANHPRVRFISQKNKGIGSASN---TA 449 (625)
T ss_dssp CSEEEEEEES-SCTTTHHHHHHHHHSSSCCSEEEEEEE-ESCSSSHHHHHHHHHTTCTTEEEEEECCCCHHHHHH---HH
T ss_pred CeEEEEEeCC-CCHHHHHHHHHHHHhCcCCCeEEEEEE-CcCChhHHHHHHHHHhhCCcEEEEeCCCCCHHHHHH---HH
Confidence 4555666663 3344444443322 12577877765 566553211 1 11 01123332 22333211111 11
Q ss_pred cccccccEEEEecccccCCCCCHHHHHHHHHH-hCCcccCC
Q 021185 89 DIVAEYNYIFLWDEDIGVENFNPRRYLSIVKD-EGLEISQP 128 (316)
Q Consensus 89 div~~YDYIflwDDDL~vd~f~i~ry~~ivr~-~gLeISQP 128 (316)
=-.+..|||++.|+|..++...++++++.+.+ .+..+..+
T Consensus 450 ~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~ 490 (625)
T 2z86_A 450 VRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYT 490 (625)
T ss_dssp HHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEE
T ss_pred HHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEe
Confidence 11257899999999999988888888887754 33444433
No 13
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=29.44 E-value=32 Score=29.69 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=26.5
Q ss_pred ccccEEEEecccccCCCCCHHHHHHHHHH
Q 021185 92 AEYNYIFLWDEDIGVENFNPRRYLSIVKD 120 (316)
Q Consensus 92 ~~YDYIflwDDDL~vd~f~i~ry~~ivr~ 120 (316)
+.-|||+|.|.|..++.-.++++++.+++
T Consensus 73 A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 73 CKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 46799999999999999999999999887
No 14
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.03 E-value=12 Score=37.72 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=0.0
Q ss_pred cccccEEEEecccccCCCCCHHHHHHHHHHhCCcccC
Q 021185 91 VAEYNYIFLWDEDIGVENFNPRRYLSIVKDEGLEISQ 127 (316)
Q Consensus 91 v~~YDYIflwDDDL~vd~f~i~ry~~ivr~~gLeISQ 127 (316)
.+..|||++.|+|-.++...++++++.++..++-++.
T Consensus 81 ~A~gdyI~flD~Dd~~~p~~l~~l~~~l~~~d~v~~~ 117 (729)
T 3l7i_A 81 EVETPYFMFLDADDELASYAITFYLEKFNNTDGLIAP 117 (729)
T ss_dssp -------------------------------------
T ss_pred hccCCEEEEECCCCCCChhHHHHHHHHhcCCCEEEEe
Confidence 3578999999999999988889988888744444443
No 15
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=25.73 E-value=1.1e+02 Score=28.87 Aligned_cols=89 Identities=18% Similarity=0.227 Sum_probs=55.1
Q ss_pred CCcEEEEEecccc----hhhHHHHHhhCCCCCcEEEEEEecCcccccccccccC-ceeEEEeecccchh---hhccc---
Q 021185 17 PMNLLAIAAGIKQ----KKIVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWAD-RAIHVSAANQTKWW---FAKRF--- 85 (316)
Q Consensus 17 ~k~Ll~~~VG~kq----k~~vd~~v~kf~~~nF~v~LfhYDg~vd~w~d~ews~-~aiHv~a~kqtKWw---~akRf--- 85 (316)
.--|+.+++|.=. +......=+-| ..++.|.-+-+=...+.--.+++.. +-++|....+.+.| -+.|+
T Consensus 49 tIGl~vfa~GkY~~~fl~~Fl~SAEk~F-m~g~~v~YYVFTD~~~~~p~v~l~~~r~~~V~~i~~~~~W~d~sm~Rm~~i 127 (289)
T 1o7q_A 49 TVGLTVFAVGRYIEHYLEEFLTSANKHF-MVGHPVIFYIMVDDVSRMPLIELGPLRSFKVFKIKPEKRWQDISMMRMKTI 127 (289)
T ss_dssp CEEEEEEECTTHHHHHHHHHHHHHHHHB-STTSCEEEEEEESCGGGCCCCCCCTTEEEEEEECCCCSSHHHHHHHHHHHH
T ss_pred eEEEEEEEecccHHHHHHHHHHHHHHhc-cCCCeEEEEEEeCChhhCCccccCCCCeEEEEEeccccCCchhHHHHHHHH
Confidence 3368889999754 33333333444 5778888777644333222334443 55788887777766 23343
Q ss_pred c---CccccccccEEEEecccccC
Q 021185 86 L---HPDIVAEYNYIFLWDEDIGV 106 (316)
Q Consensus 86 L---HPdiv~~YDYIflwDDDL~v 106 (316)
+ .-++..+.||+|..|=|...
T Consensus 128 ~~~~~~~~~~evDYLf~~dvd~~F 151 (289)
T 1o7q_A 128 GEHIVAHIQHEVDFLFCMDVDQVF 151 (289)
T ss_dssp HHHHHHTHHHHCSEEEEECSSEEE
T ss_pred HHHHHHHHhhcCCEEEEeeCCcEe
Confidence 2 25568899999999977543
No 16
>4dix_A Plectin-related protein; PH domain, IG domain, malonate ION, beta sheet, PH superfold cytosolic, protein binding; 1.70A {Arabidopsis thaliana}
Probab=22.41 E-value=60 Score=29.74 Aligned_cols=38 Identities=26% Similarity=0.403 Sum_probs=31.3
Q ss_pred hHHHHHhhCCCCCcEEEEEEecCcccccccccccCceeEEEeeccc
Q 021185 32 IVDQIVRKFPSKDFVVMLFHYDGVVDEWKDLVWADRAIHVSAANQT 77 (316)
Q Consensus 32 ~vd~~v~kf~~~nF~v~LfhYDg~vd~w~d~ews~~aiHv~a~kqt 77 (316)
.|+++++| ++..|.|+++-+.|. +|.+.++|+......
T Consensus 106 yVEaL~rk-~~tEFNVvv~q~nG~-------d~~s~sihvl~vgk~ 143 (230)
T 4dix_A 106 YVEALVRK-HDVDFNVVVTQMSGE-------DHTSESIHLFHVGKM 143 (230)
T ss_dssp HHHHHHTT-SEEEEEEEEEEETTE-------ECCCCCEEEEEEESS
T ss_pred HHHHHhhc-CCCcEEEEEEEEcCc-------cCccceEEEEEeccE
Confidence 79999999 478999999999996 566789998776433
No 17
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=21.89 E-value=43 Score=31.49 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=57.0
Q ss_pred CcEEEEEecccchhhHHHHHhhCCC-CCcEEEEEEecCcccccccccccC---ceeEEEeecccchhhhccccCcccccc
Q 021185 18 MNLLAIAAGIKQKKIVDQIVRKFPS-KDFVVMLFHYDGVVDEWKDLVWAD---RAIHVSAANQTKWWFAKRFLHPDIVAE 93 (316)
Q Consensus 18 k~Ll~~~VG~kqk~~vd~~v~kf~~-~nF~v~LfhYDg~vd~w~d~ews~---~aiHv~a~kqtKWw~akRfLHPdiv~~ 93 (316)
++-++|-+- +......++|+.... ..-+=+++..-..-..-.+..|.. .++.|....+.+==+-.||+- .-.-.
T Consensus 29 ~FTvvi~ty-~R~~~L~~lv~~~~~~~~v~~IvVvWn~~~~~pp~~~~~~~~~~~vpv~v~~~~~nsLnnRF~p-~~~i~ 106 (293)
T 1omz_A 29 SFTLIMQTY-NRTDLLLRLLNHYQAVPSLHKVIVVWNNVGEKGPEELWNSLGPHPIPVIFKPQTANKMRNRLQV-FPEVE 106 (293)
T ss_dssp CEEEEEEES-SCHHHHHHHHHHHTTSTTEEEEEEEECCTTCCCTHHHHHHTCCCSSCEEEEECSSCCGGGGGSC-CTTCC
T ss_pred ceEEEEEee-cccHHHHHHHHHHhcCCCCCeEEEEeCCCCCCCChhhccccCCCCccEEEEeCCCCchhhccCC-CccCC
Confidence 444444333 334555666664432 334444444433211122223422 133343444433335677764 33346
Q ss_pred ccEEEEecccccCCCCCHHHHHHHHHHh
Q 021185 94 YNYIFLWDEDIGVENFNPRRYLSIVKDE 121 (316)
Q Consensus 94 YDYIflwDDDL~vd~f~i~ry~~ivr~~ 121 (316)
-|.||..|||+.+...+++.=|++-+++
T Consensus 107 T~AVLslDDDv~l~~~el~faF~vWr~~ 134 (293)
T 1omz_A 107 TNAVLMVDDDTLISAQDLVFAFSIWQQF 134 (293)
T ss_dssp SSEEEEECTTEEECHHHHHHHHHHHTTS
T ss_pred cCEEEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 8999999999999999999989888754
Done!