BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021186
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42533|BCCP1_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1,
chloroplastic OS=Arabidopsis thaliana GN=BCCP1 PE=1 SV=2
Length = 280
Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 165/325 (50%), Positives = 205/325 (63%), Gaps = 54/325 (16%)
Query: 1 MASSSLATGTPSASA----FSKNSSSLVHYYRNGTVFFRLSSSKPKLRFFAKTETVLRIQ 56
MASSS + +P+A+A ++ SS R+ V FRLS+ KPKLRF +K
Sbjct: 1 MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSA-KPKLRFLSK-------- 51
Query: 57 GSQPSWKCATVVKSQLNEVSFFQWFSFEDIFSNFRSFLDSLLGTPVEFKVAFDGSSNASA 116
PS VVK+Q N KV+ SSNA+
Sbjct: 52 ---PSRSSYPVVKAQSN-------------------------------KVSTGASSNAAK 77
Query: 117 TPAAETKDAKQPN---EPSPSI--LASEESISEFISQVSSLIKLVDSRDIVELQLKQLDC 171
+ + K+ N E S S LA+EESISEF++QV++L+KLVDSRDIVELQLKQLDC
Sbjct: 78 VDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTTLVKLVDSRDIVELQLKQLDC 137
Query: 172 ELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPTQPAPAPTSSAPSASPAPPASPPSSTA 231
EL+IRKKEALPQP APAS MM P+ P Q AP +A + +P+ PAS P +
Sbjct: 138 ELVIRKKEALPQPQAPASYVMMQQPNQPSYA--QQMAPPAAPAAAAPAPSTPASLPPPSP 195
Query: 232 GKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRS 291
KSSLP +K PMAGTFYRSPAPGEPPF+KVGD+VQKGQVLCI+EAMKLMNEIE+D +
Sbjct: 196 PTPAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHT 255
Query: 292 GTIVEIIAEDRKPVSVDTPLFVIEP 316
GT+V+I+AED KPVS+DTPLFV++P
Sbjct: 256 GTVVDIVAEDGKPVSLDTPLFVVQP 280
>sp|Q42783|BCCP_SOYBN Biotin carboxyl carrier protein of acetyl-CoA carboxylase,
chloroplastic OS=Glycine max GN=ACCB-1 PE=1 SV=1
Length = 262
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 179/229 (78%), Gaps = 11/229 (4%)
Query: 95 DSLLGTPVEFK---VAFDGSSNASATP-AAETKD---AKQPNEPSPSILASEESISEFIS 147
++LL T V+ + VA D SSNA++ P A++K+ AK EPS S+LA++ES+S+FI+
Sbjct: 38 NTLLCTRVKAQLNEVALDSSSNATSPPMKAKSKEEPPAKPLAEPSSSVLATQESVSQFIT 97
Query: 148 QVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPTQP 207
QV+SL+KLVDSRDIVEL+LKQ D E+ IRKKEA+PQPP ++++SP PP + PP P
Sbjct: 98 QVASLVKLVDSRDIVELKLKQHDVEVTIRKKEAMPQPPPAPQPSVVYSPPPPALPPPPVP 157
Query: 208 APAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVGDR 267
A P + A+P P ++P A KS KSSLPPLK PMAGTFYRSPAPGEP FVKVGD+
Sbjct: 158 ASTPAPTLARATPTPTSAP----AVKSAKSSLPPLKSPMAGTFYRSPAPGEPSFVKVGDK 213
Query: 268 VQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIEP 316
V+KGQV+CIIEAMKLMNEIEAD+SGTIVEI+AED K VSVDTPLFVI+P
Sbjct: 214 VKKGQVVCIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSVDTPLFVIQP 262
>sp|Q9LLC1|BCCP2_ARATH Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2,
chloroplastic OS=Arabidopsis thaliana GN=BCCP2 PE=1 SV=1
Length = 255
Score = 208 bits (529), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/184 (63%), Positives = 138/184 (75%), Gaps = 23/184 (12%)
Query: 142 ISEFISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQ--PPAPASMAMMHSPSPP 199
+SEF+++VS L+KLVDS+DIVEL+LKQLDCE++IRKKEAL Q PPAP +M P
Sbjct: 86 LSEFMAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPAPVYHSM------P 139
Query: 200 PVM-----PPTQPA--PAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYR 252
PVM PP QP P + + + A P S PSS S PPLK PMAGTFYR
Sbjct: 140 PVMADFSMPPAQPVALPPSPTPTSTPATAKPTSAPSS--------SHPPLKSPMAGTFYR 191
Query: 253 SPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLF 312
SP PGEPPFVKVGD+VQKGQ++CIIEAMKLMNEIEA++SGTI+E++AED KPVSVDTPLF
Sbjct: 192 SPGPGEPPFVKVGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLF 251
Query: 313 VIEP 316
VI P
Sbjct: 252 VIAP 255
>sp|Q06881|BCCP_NOSS1 Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc
sp. (strain PCC 7120 / UTEX 2576) GN=accB PE=1 SV=2
Length = 182
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 101/176 (57%), Gaps = 6/176 (3%)
Query: 147 SQVSSLIKLVDSRDIVELQLKQLDCELIIRK-----KEALPQPPAPASMAMMHS-PSPPP 200
+++ L+ + DI E+ LK D EL +RK +P AP S + PS P
Sbjct: 6 NEIRQLLTTIAQTDIAEVTLKSDDFELTVRKAVGVNNSVVPVVTAPLSGVVGSGLPSAIP 65
Query: 201 VMPPTQPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPP 260
++ P+P+P A+ S S K + L + PM GTFYR+PAPGE
Sbjct: 66 IVAHAAPSPSPEPGTSRAADHAVTSSGSQPGAKIIDQKLAEVASPMVGTFYRAPAPGEAV 125
Query: 261 FVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIEP 316
FV+VGDR+++GQ +CIIEAMKLMNEIEAD SG ++EI+ ++ +PV + PL I+P
Sbjct: 126 FVEVGDRIRQGQTVCIIEAMKLMNEIEADVSGQVIEILVQNGEPVEYNQPLMRIKP 181
>sp|P0ABE1|BCCP_SHIFL Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Shigella flexneri GN=accB PE=3 SV=1
Length = 156
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 16/170 (9%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I ++ LI+LV+ I EL++ + E +R A P AS +M P+M
Sbjct: 3 IRKIKKLIELVEESGISELEIS--EGEESVRISRAAP----AASFPVMQQAYAAPMM--Q 54
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVG 265
QPA ++ A PA+ PS A + + S ++ PM GTFYR+P+P F++VG
Sbjct: 55 QPA--------QSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVG 106
Query: 266 DRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 315
+V G LCI+EAMK+MN+IEAD+SGT+ I+ E +PV D PL VIE
Sbjct: 107 QKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 156
>sp|P0ABD8|BCCP_ECOLI Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Escherichia coli (strain K12) GN=accB PE=1 SV=1
Length = 156
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 16/170 (9%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I ++ LI+LV+ I EL++ + E +R A P AS +M P+M
Sbjct: 3 IRKIKKLIELVEESGISELEIS--EGEESVRISRAAP----AASFPVMQQAYAAPMM--Q 54
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVG 265
QPA ++ A PA+ PS A + + S ++ PM GTFYR+P+P F++VG
Sbjct: 55 QPA--------QSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVG 106
Query: 266 DRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 315
+V G LCI+EAMK+MN+IEAD+SGT+ I+ E +PV D PL VIE
Sbjct: 107 QKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 156
>sp|P0ABD9|BCCP_ECOL6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=accB PE=3 SV=1
Length = 156
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 16/170 (9%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I ++ LI+LV+ I EL++ + E +R A P AS +M P+M
Sbjct: 3 IRKIKKLIELVEESGISELEIS--EGEESVRISRAAP----AASFPVMQQAYAAPMM--Q 54
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVG 265
QPA ++ A PA+ PS A + + S ++ PM GTFYR+P+P F++VG
Sbjct: 55 QPA--------QSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVG 106
Query: 266 DRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 315
+V G LCI+EAMK+MN+IEAD+SGT+ I+ E +PV D PL VIE
Sbjct: 107 QKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 156
>sp|P0ABE0|BCCP_ECO57 Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Escherichia coli O157:H7 GN=accB PE=3 SV=1
Length = 156
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 96/170 (56%), Gaps = 16/170 (9%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I ++ LI+LV+ I EL++ + E +R A P AS +M P+M
Sbjct: 3 IRKIKKLIELVEESGISELEIS--EGEESVRISRAAP----AASFPVMQQAYAAPMM--Q 54
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVG 265
QPA ++ A PA+ PS A + + S ++ PM GTFYR+P+P F++VG
Sbjct: 55 QPA--------QSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAFIEVG 106
Query: 266 DRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 315
+V G LCI+EAMK+MN+IEAD+SGT+ I+ E +PV D PL VIE
Sbjct: 107 QKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 156
>sp|P37799|BCCP_PSEAE Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=accB PE=3 SV=1
Length = 156
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 242 LKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAED 301
++ PM GTFYR+ +P FV+VG V+KG +LCI+EAMK+MN IEA+ SGTI I+ E+
Sbjct: 83 VRSPMVGTFYRAASPTSANFVEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVEN 142
Query: 302 RKPVSVDTPLFVI 314
+PV D PLF I
Sbjct: 143 GQPVEFDQPLFTI 155
>sp|Q1XDK5|BCCP_PORYE Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Porphyra yezoensis GN=accB PE=3 SV=1
Length = 158
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 80/170 (47%), Gaps = 17/170 (10%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I ++ L+ V + I L+LKQ EL++ K + ++P
Sbjct: 5 IKKLQDLLSSVQRKKIQTLKLKQGKFELLLNK---------------TYKKVNQEIIPSQ 49
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVG 265
+ A S PS + ++ + PM GTFY SPAPGE FV+VG
Sbjct: 50 KSAVLQNS--PSTIIKSINNTKKIFCVNEDRTEYATIVSPMVGTFYHSPAPGEKIFVQVG 107
Query: 266 DRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 315
D V+ Q +CIIEAMKLMNEIEA+ G I+EI+ +D V L +E
Sbjct: 108 DEVKFNQTVCIIEAMKLMNEIEAEIEGKIIEILVKDGDIVDCGQALMKVE 157
>sp|P43874|BCCP_HAEIN Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=accB PE=1 SV=1
Length = 155
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%)
Query: 242 LKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAED 301
++ PM GTFYRSP+P FV+VG V+ G LCI+EAMK+MN IEAD++G + I+ D
Sbjct: 82 VRSPMVGTFYRSPSPEAKAFVEVGQSVKVGDALCIVEAMKMMNRIEADKAGVVKAILIND 141
Query: 302 RKPVSVDTPLFVIE 315
V D PL VIE
Sbjct: 142 GNAVEFDEPLIVIE 155
>sp|P49786|BCCP_BACSU Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Bacillus subtilis (strain 168) GN=accB PE=3 SV=2
Length = 159
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 50/77 (64%)
Query: 238 SLPPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEI 297
+L + PM GTFY S +P P+V G +V + V+CI+EAMKL NEIEA+ G IVE+
Sbjct: 80 NLHKITSPMVGTFYASSSPEAGPYVTAGSKVNENTVVCIVEAMKLFNEIEAEVKGEIVEV 139
Query: 298 IAEDRKPVSVDTPLFVI 314
+ E+ + V PLF++
Sbjct: 140 LVENGQLVEYGQPLFLV 156
>sp|O19918|BCCP_CYACA Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Cyanidium caldarium GN=accB PE=3 SV=1
Length = 152
Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 49/82 (59%)
Query: 233 KSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSG 292
K K ++ + P++G FY S PG PFV VG V KGQ LCIIEAMK MNEIE+D G
Sbjct: 66 KQDKKNIIDILSPISGIFYSSSKPGASPFVAVGSVVSKGQTLCIIEAMKTMNEIESDSIG 125
Query: 293 TIVEIIAEDRKPVSVDTPLFVI 314
I +I A + V+ + L I
Sbjct: 126 KIHQICARNGDFVTKNQVLMKI 147
>sp|Q9Z901|BCCP_CHLPN Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Chlamydia pneumoniae GN=accB PE=3 SV=1
Length = 167
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 245 PMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKP 304
P+ GTFY SPAP P FVK GD V + ++CI+EAMK+MNE++A SG ++E++ + P
Sbjct: 93 PLVGTFYGSPAPDSPSFVKPGDIVSEDTIVCIVEAMKVMNEVKAGMSGRVLEVLITNGDP 152
Query: 305 VSVDTPLFVI 314
V + LF I
Sbjct: 153 VQFGSKLFRI 162
>sp|Q5XAE6|BCCP_STRP6 Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=accB PE=1 SV=1
Length = 166
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 10/171 (5%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I ++ L+ D+ + E K + ELI K E AS++ P +P
Sbjct: 3 IQEIKDLMAQFDTSSLREFLFKTNEGELIFSKNEQ----HLNASISNQEHAVP---VPQV 55
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTA--GKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVK 263
Q P T+S S SPA P +S + ++ P+ G Y + +P +PPFV
Sbjct: 56 QLVPNSTASEAS-SPASVKDVPVEEQPQAESFVAEGDIVESPLVGVAYLAASPDKPPFVA 114
Query: 264 VGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVI 314
VGD V+KGQ L IIEAMK+MNE+ A G I EI+ + + L I
Sbjct: 115 VGDTVKKGQTLVIIEAMKVMNEVPAPCDGVITEILVSNEDVIEFGQGLVRI 165
>sp|O84125|BCCP_CHLTR Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=accB PE=3
SV=1
Length = 164
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 245 PMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKP 304
P+ GTFY SP+P P F+K GD V + V+CI+EAMK+MNE++A SG + EI+ + P
Sbjct: 92 PLVGTFYGSPSPEAPAFIKPGDTVSEDTVVCIVEAMKVMNEVKAGMSGRVEEILITNGDP 151
Query: 305 VSVDTPLFVI 314
V + LF I
Sbjct: 152 VQFGSKLFRI 161
>sp|Q9PKR5|BCCP_CHLMU Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Chlamydia muridarum (strain MoPn / Nigg) GN=accB PE=3
SV=1
Length = 163
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%)
Query: 245 PMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKP 304
P+ GTFY +P+P P FVK GD V + V+CI+EAMK+MNE++A +G + E++ + P
Sbjct: 91 PLVGTFYGAPSPESPAFVKPGDIVSEDTVVCIVEAMKVMNEVKAGMAGRVEEVLITNGDP 150
Query: 305 VSVDTPLFVI 314
V + LF I
Sbjct: 151 VQFGSKLFRI 160
>sp|P51283|BCCP_PORPU Biotin carboxyl carrier protein of acetyl-CoA carboxylase
OS=Porphyra purpurea GN=accB PE=3 SV=1
Length = 157
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 146 ISQVSSLIKLVDSRDIVELQLKQLDCELIIRKKEALPQPPAPASMAMMHSPSPPPVMPPT 205
I + L+ V + I L+LK+ ELI+ K P P + + S
Sbjct: 5 IKDLQDLLSSVQRKKIQTLKLKKNKFELILNK----PSKKVPQEVVSLKSSHI------F 54
Query: 206 QPAPAPTSSAPSASPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVG 265
+ + T + P S PS+ V PM GTFY SPAPGE FV+VG
Sbjct: 55 KSIHSETINIPPKKTESINSKPSTNYATIVS--------PMVGTFYHSPAPGEKIFVQVG 106
Query: 266 DRVQKGQVLCIIEAMKLMN 284
D V+ Q +CIIEAMKLMN
Sbjct: 107 DIVKCNQTVCIIEAMKLMN 125
>sp|D3DJ41|2OCL_HYDTT 2-oxoglutarate carboxylase large subunit OS=Hydrogenobacter
thermophilus (strain DSM 6534 / IAM 12695 / TK-6)
GN=cfiA PE=1 SV=1
Length = 652
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 221 APPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGE--PPFVKVGDRVQKGQVLCIIE 278
A P P+ TA ++ + +P P T +P PG VK GD+V++GQ + I+E
Sbjct: 550 AIPKGGPTPTAVQAEEKGIPKATQPGDAT---APMPGRVVRVLVKEGDKVKEGQTVAIVE 606
Query: 279 AMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVIE 315
AMK+ NEI A SG + ++ + V+ D L I+
Sbjct: 607 AMKMENEIHAPISGVVEKVFVKPGDNVTPDDALLRIK 643
>sp|Q9ZAA7|GCDC_ACIFV Glutaconyl-CoA decarboxylase subunit gamma OS=Acidaminococcus
fermentans (strain ATCC 25085 / DSM 20731 / VR4) GN=gcdC
PE=1 SV=1
Length = 145
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 253 SPAPGEPPFVKV--GDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEI 297
+P PG+ V V GD+V+ G VL I+EAMK+ NEI A GT+ E+
Sbjct: 82 APMPGKILSVNVKPGDKVEAGDVLLILEAMKMQNEIMAPEDGTVSEV 128
>sp|P29337|BCCP_STRMU Biotin carboxyl carrier protein OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=bcc PE=3 SV=2
Length = 130
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 213 SSAPSASPAPPASPPSSTAGKSVKSS-----------LPPLKCPMAGTFYRSPAPGEPPF 261
SS P+A+P P + + A + S + PM GT +
Sbjct: 24 SSVPAATPITPTTENTRAASDQKQQSQTPSPAATASAANTMPAPMPGTILKV-------L 76
Query: 262 VKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVI 314
V VGD V + Q L I+EAMK+ NEI A +GT+ I + V+ L I
Sbjct: 77 VNVGDTVSENQPLMILEAMKMENEIVAGMAGTVSAIHVSSGQTVNAGDNLITI 129
>sp|P13187|DCOA_KLEPN Oxaloacetate decarboxylase alpha chain OS=Klebsiella pneumoniae
GN=oadA PE=3 SV=2
Length = 596
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 241 PLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAE 300
P+ P+AGT ++ A G V G+VL I+EAMK+ EI A ++GT+ I +
Sbjct: 529 PVTAPLAGTIWKVLASE-------GQTVAAGEVLLILEAMKMETEIRAAQAGTVRGIAVK 581
Query: 301 DRKPVSVDTPLFVI 314
V+V L +
Sbjct: 582 AGDAVAVGDTLMTL 595
>sp|Q8XGX8|DCOA_SALTI Oxaloacetate decarboxylase alpha chain OS=Salmonella typhi GN=oadA1
PE=3 SV=3
Length = 591
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 219 SPAPPASPPSSTAGKSVKSSLPPLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIE 278
+ A PA+ + + + P+ P+AG ++ A G V +G VL I+E
Sbjct: 502 TTAVPAASSAPVQAAAPAGAGTPVTAPLAGNIWKVIATE-------GQSVAEGDVLLILE 554
Query: 279 AMKLMNEIEADRSGTIVEIIAEDRKPVSVDTPLFVI 314
AMK+ EI A ++GT+ I + VSV L +
Sbjct: 555 AMKMETEIRAAQAGTVRGIAVKSGDAVSVGDTLMTL 590
>sp|Q03030|DCOA_SALTY Oxaloacetate decarboxylase alpha chain OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=oadA1 PE=3 SV=2
Length = 591
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 241 PLKCPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAE 300
P+ P+AG ++ A G V +G VL I+EAMK+ EI A ++GT+ I +
Sbjct: 524 PVTAPLAGNIWKVIAT-------EGQTVAEGDVLLILEAMKMETEIRAAQAGTVRGIAVK 576
Query: 301 DRKPVSVDTPLFVI 314
VSV L +
Sbjct: 577 SGDAVSVGDTLMTL 590
>sp|P02904|BCCP_PROFR Methylmalonyl-CoA carboxyltransferase 1.3S subunit
OS=Propionibacterium freudenreichii subsp. shermanii
PE=1 SV=1
Length = 123
Score = 38.9 bits (89), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 244 CPMAGTFYRSPAPGEPPFVKVGDRVQKGQVLCIIEAMKLMNEIEADRSGTIVEIIAEDRK 303
P+AGT + VK GD V+ GQ + ++EAMK+ EI A G + +++ ++R
Sbjct: 59 APLAGTVSK-------ILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERD 111
Query: 304 PV 305
V
Sbjct: 112 AV 113
>sp|Q29M42|C2D1_DROPS Coiled-coil and C2 domain-containing protein 1-like OS=Drosophila
pseudoobscura pseudoobscura GN=GA18377 PE=3 SV=2
Length = 814
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 173 LIIRKKEALPQPPAPASMAMMHSPSPPPV--MPPTQPAPAPTSSAPSASPAPPASPPSST 230
++ + ++A+ Q A +A P PP +P T+PAPA T S P++ +PPA+ +S
Sbjct: 390 IVKQYEDAIKQYKAGKPVAYDELPVPPGFGPLPSTEPAPAATPSLPTSPTSPPATASTSA 449
Query: 231 AG 232
G
Sbjct: 450 GG 451
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,648,904
Number of Sequences: 539616
Number of extensions: 5089293
Number of successful extensions: 104247
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 2176
Number of HSP's that attempted gapping in prelim test: 48588
Number of HSP's gapped (non-prelim): 27936
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)