Citrus Sinensis ID: 021191

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MNDSKLTKITITPTAAALADSKAEPSASSSRDADAKPLDVMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS
ccccccccccccccHHHHccccccccccccccccccccHHHHccccccccccccccccccccccccEEEEEEEccccccccccEEEEEEccccccEEEEEEEEcccccHHHHHHHHHHHHHHHHcccccHHcHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEccccccccccHHHHHHHHHcccEEEEccccccccEEHHHHHcccccccccccccccEEEEEEccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEEEEEcccc
cccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccccccHcccEEEEEEccccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEccccEEccEEHEHHHHccHHHcccccccccEEEEEcccccEEEEEccccHccccHHHHHHHHHccccHHHHHHHHHHHHHHccccccEEEEEEEEccc
mndskltkiTITPTAaaladskaepsasssrdadakplDVMIaardpdalfsgggmsfltgsrtakfsygystfkgkrssmedfyetslsevdGQMVAFFGvydghggsrtAEYLKNHLFknlsshpdfikDTKTAVVEVFKKTDEnylseekgqhkdagstasTAVLLGDRLLVANVGDSRVVAsragsaiplsidhkpdrsdERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYvvaepeiqeeeidgvdFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYargssdniTCVVVRFENS
mndskltkititptaaaladskaepsasssrdadakPLDVMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNlsshpdfikDTKTAVVEVFKKTDENYLseekgqhkdagstASTAVLLGDRLLVANVGDSRVvasragsaiplsidhkpdrsdERQRIEEAGgfviwagtWRVGGVLAVSRAFGDRLLKQYVVAepeiqeeeidgvDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAyargssdnitcvvvrfens
MNDSKLTKITITPTAAALADSKAEPSASSSRDADAKPLDVMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS
************************************************ALFSGGGMSFLTGSRTAKFSYGYSTFKG*****EDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKK*********************TAVLLGDRLLVANVGDSRVVA*************************EAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRF***
****************************************************************AKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKG*HKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFEN*
MNDSKLTKITITPTA*******************AKPLDVMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLS************ASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS
*************************************************************S*TAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFEN*
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNDSKLTKITITPTAAALADSKAEPSASSSRDADAKPLDVMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query316 2.2.26 [Sep-21-2011]
Q8VZN9371 Probable protein phosphat yes no 0.876 0.746 0.754 1e-127
Q8RXV3311 Probable protein phosphat no no 0.825 0.839 0.644 1e-101
Q4PSE8 447 Probable protein phosphat no no 0.825 0.583 0.644 1e-100
Q8LAY8354 Probable protein phosphat no no 0.825 0.737 0.644 2e-99
Q67UX7348 Probable protein phosphat yes no 0.813 0.738 0.642 8e-98
Q5Z6F5327 Probable protein phosphat no no 0.784 0.758 0.654 7e-96
Q7XR06282 Probable protein phosphat no no 0.810 0.907 0.627 2e-94
Q6L5C4491 Probable protein phosphat no no 0.829 0.533 0.615 6e-94
Q94AT1420 Probable protein phosphat no no 0.835 0.628 0.591 2e-91
Q6EN45363 Probable protein phosphat no no 0.791 0.688 0.605 4e-89
>sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1 Back     alignment and function desciption
 Score =  454 bits (1168), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 209/277 (75%), Positives = 251/277 (90%)

Query: 40  VMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAF 99
           +MI++RDP+ALFSGGG+SFL G RT KFSYGYS+ KGKR++MED++ET +S+V+GQMVAF
Sbjct: 95  LMISSRDPNALFSGGGISFLAGVRTVKFSYGYSSLKGKRATMEDYFETRISDVNGQMVAF 154

Query: 100 FGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDA 159
           FGV+DGHGG+RTAEYLKN+LFKNL SH DFI DTK A+VEVFK+TDE YL EE GQ K+A
Sbjct: 155 FGVFDGHGGARTAEYLKNNLFKNLVSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNA 214

Query: 160 GSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWA 219
           GSTA+TA L+GD+L+VANVGDSRVVASR GSA+PLS DHKPDRSDERQRIE+AGGF+IWA
Sbjct: 215 GSTAATAFLIGDKLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWA 274

Query: 220 GTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAM 279
           GTWRVGG+LAVSRAFGD+ LK YV+AEPEIQEE+I  ++FI++ASDGLWNV+SN+DAVA+
Sbjct: 275 GTWRVGGILAVSRAFGDKQLKPYVIAEPEIQEEDISTLEFIVVASDGLWNVLSNKDAVAI 334

Query: 280 VEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS 316
           V  I+DAE A+RKL++E YARGS DNITC+VVRFE S
Sbjct: 335 VRDISDAETAARKLVQEGYARGSCDNITCIVVRFEVS 371

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q8RXV3|P2C59_ARATH Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1 Back     alignment and function description
>sp|Q4PSE8|P2C71_ARATH Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1 Back     alignment and function description
>sp|Q8LAY8|P2C69_ARATH Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1 Back     alignment and function description
>sp|Q67UX7|P2C10_ORYSJ Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z6F5|P2C59_ORYSJ Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1 Back     alignment and function description
>sp|Q7XR06|P2C45_ORYSJ Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2 Back     alignment and function description
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description
>sp|Q94AT1|P2C76_ARATH Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1 Back     alignment and function description
>sp|Q6EN45|P2C13_ORYSJ Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
255558462 571 protein phosphatase 2c, putative [Ricinu 0.886 0.490 0.886 1e-146
118488591303 unknown [Populus trichocarpa] 0.873 0.910 0.855 1e-138
224085051276 predicted protein [Populus trichocarpa] 0.873 1.0 0.847 1e-137
225457845276 PREDICTED: probable protein phosphatase 0.873 1.0 0.855 1e-137
356536508320 PREDICTED: probable protein phosphatase 0.914 0.903 0.786 1e-135
388516279317 unknown [Lotus japonicus] 0.879 0.876 0.816 1e-135
449453017275 PREDICTED: probable protein phosphatase 0.860 0.989 0.808 1e-131
356574987288 PREDICTED: LOW QUALITY PROTEIN: probable 0.857 0.940 0.811 1e-129
297852168376 predicted protein [Arabidopsis lyrata su 0.873 0.734 0.760 1e-125
30693757371 putative protein phosphatase 2C 11 [Arab 0.876 0.746 0.754 1e-125
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis] gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  522 bits (1345), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 249/281 (88%), Positives = 271/281 (96%), Gaps = 1/281 (0%)

Query: 37  PL-DVMIAARDPDALFSGGGMSFLTGSRTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQ 95
           PL D+MIA RDPDALFSGGG+SFL+GSRTAKFSYGYS+FKGKRSSMEDFYET +SEVDGQ
Sbjct: 291 PLSDIMIANRDPDALFSGGGISFLSGSRTAKFSYGYSSFKGKRSSMEDFYETRISEVDGQ 350

Query: 96  MVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQ 155
           MVAFFGV+DGHGG+RTAEYLKN+LF+NLSSHPDFIKDTKTA+VEVF++TD +YL+EEKG 
Sbjct: 351 MVAFFGVFDGHGGARTAEYLKNNLFRNLSSHPDFIKDTKTAIVEVFRQTDADYLNEEKGH 410

Query: 156 HKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGF 215
            KDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGF
Sbjct: 411 QKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGF 470

Query: 216 VIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDGVDFIIIASDGLWNVISNRD 275
           +IWAGTWRVGGVLAVSRAFGD+LLK YVVAEPEIQEEEIDGVDFII+ASDGLWNV+SN+D
Sbjct: 471 IIWAGTWRVGGVLAVSRAFGDKLLKPYVVAEPEIQEEEIDGVDFIIVASDGLWNVLSNQD 530

Query: 276 AVAMVEHITDAEAASRKLIKEAYARGSSDNITCVVVRFENS 316
           AVA+V  I DAEAASRKLI+EAYARGSSDNITCVVVRF+NS
Sbjct: 531 AVALVRDIADAEAASRKLIQEAYARGSSDNITCVVVRFDNS 571

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118488591|gb|ABK96108.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224085051|ref|XP_002307471.1| predicted protein [Populus trichocarpa] gi|222856920|gb|EEE94467.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225457845|ref|XP_002267913.1| PREDICTED: probable protein phosphatase 2C 11 [Vitis vinifera] gi|302142730|emb|CBI19933.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356536508|ref|XP_003536779.1| PREDICTED: probable protein phosphatase 2C 11-like [Glycine max] Back     alignment and taxonomy information
>gi|388516279|gb|AFK46201.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|449453017|ref|XP_004144255.1| PREDICTED: probable protein phosphatase 2C 11-like [Cucumis sativus] gi|449492785|ref|XP_004159100.1| PREDICTED: probable protein phosphatase 2C 11-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356574987|ref|XP_003555624.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 11-like [Glycine max] Back     alignment and taxonomy information
>gi|297852168|ref|XP_002893965.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297339807|gb|EFH70224.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|30693757|ref|NP_175057.2| putative protein phosphatase 2C 11 [Arabidopsis thaliana] gi|75304482|sp|Q8VZN9.1|P2C11_ARATH RecName: Full=Probable protein phosphatase 2C 11; Short=AtPP2C11 gi|17381034|gb|AAL36329.1| putative protein phosphatase type 2C [Arabidopsis thaliana] gi|21436259|gb|AAM51268.1| putative protein phosphatase type 2C [Arabidopsis thaliana] gi|332193885|gb|AEE32006.1| putative protein phosphatase 2C 11 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.977 0.832 0.702 7.1e-116
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.825 0.839 0.644 8.1e-92
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.835 0.590 0.640 7.3e-91
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.825 0.737 0.644 1.2e-90
TAIR|locus:2163781420 AT5G53140 [Arabidopsis thalian 0.917 0.690 0.549 1.9e-83
TAIR|locus:2194734283 AT1G78200 [Arabidopsis thalian 0.775 0.865 0.428 1.9e-51
TAIR|locus:2008341282 AT1G34750 [Arabidopsis thalian 0.772 0.865 0.424 1.8e-48
TAIR|locus:2121373283 AT4G28400 [Arabidopsis thalian 0.768 0.858 0.434 3.7e-48
TAIR|locus:2046046290 PIA1 "PP2C induced by AVRRPM1" 0.768 0.837 0.434 9.8e-48
TAIR|locus:2061579339 AT2G34740 [Arabidopsis thalian 0.772 0.719 0.417 1.1e-46
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1142 (407.1 bits), Expect = 7.1e-116, P = 7.1e-116
 Identities = 220/313 (70%), Positives = 265/313 (84%)

Query:     6 LTKITITPTAAA--LADSKAEPSASSSRDADAKPLDVMIAARDPDALFSGGGMSFLTGSR 63
             LT  +  P + A    D+ + P  SSS  A    L  MI++RDP+ALFSGGG+SFL G R
Sbjct:    61 LTNPSPPPLSVAPLRGDANSPPPESSSSPATKSSL--MISSRDPNALFSGGGISFLAGVR 118

Query:    64 TAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNL 123
             T KFSYGYS+ KGKR++MED++ET +S+V+GQMVAFFGV+DGHGG+RTAEYLKN+LFKNL
Sbjct:   119 TVKFSYGYSSLKGKRATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNL 178

Query:   124 SSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTASTAVLLGDRLLVANVGDSRV 183
              SH DFI DTK A+VEVFK+TDE YL EE GQ K+AGSTA+TA L+GD+L+VANVGDSRV
Sbjct:   179 VSHDDFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAATAFLIGDKLIVANVGDSRV 238

Query:   184 VASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYV 243
             VASR GSA+PLS DHKPDRSDERQRIE+AGGF+IWAGTWRVGG+LAVSRAFGD+ LK YV
Sbjct:   239 VASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLKPYV 298

Query:   244 VAEPEIQEEEIDGVDFIIIASDGLWNVISNRDAVAMVEHITDAEAASRKLIKEAYARGSS 303
             +AEPEIQEE+I  ++FI++ASDGLWNV+SN+DAVA+V  I+DAE A+RKL++E YARGS 
Sbjct:   299 IAEPEIQEEDISTLEFIVVASDGLWNVLSNKDAVAIVRDISDAETAARKLVQEGYARGSC 358

Query:   304 DNITCVVVRFENS 316
             DNITC+VVRFE S
Sbjct:   359 DNITCIVVRFEVS 371
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163781 AT5G53140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194734 AT1G78200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008341 AT1G34750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121373 AT4G28400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046046 PIA1 "PP2C induced by AVRRPM1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061579 AT2G34740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VZN9P2C11_ARATH3, ., 1, ., 3, ., 1, 60.75450.87650.7466yesno
Q67UX7P2C10_ORYSJ3, ., 1, ., 3, ., 1, 60.64250.81320.7385yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
eugene3.00050932
hypothetical protein (277 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-88
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 2e-85
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-64
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 7e-50
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-46
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 6e-40
PRK14559645 PRK14559, PRK14559, putative protein serine/threon 0.002
pfam13672211 pfam13672, PP2C_2, Protein phosphatase 2C 0.002
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  263 bits (675), Expect = 4e-88
 Identities = 107/258 (41%), Positives = 149/258 (57%), Gaps = 15/258 (5%)

Query: 67  FSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSH 126
           FS G S   G R + ED        ++ +    FGV+DGHGG    E+    L + L   
Sbjct: 1   FSAGVSDKGGDRKTNEDAV-VIKPNLNNEDGGLFGVFDGHGGHAAGEFASKLLVEELLEE 59

Query: 127 PDFI-----KDTKTAVVEVFKKTDENYLSEEKGQHKDA--GSTASTAVLLGDRLLVANVG 179
            +       +D + A+ + F + DE  L E + +  DA  G+TA  A++ G++L VANVG
Sbjct: 60  LEETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVG 119

Query: 180 DSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLL 239
           DSR V  R G A+ L+ DHKP   +ER+RIE+AGG V      RV GVLAV+RA GD  L
Sbjct: 120 DSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN---GRVPGVLAVTRALGDFDL 176

Query: 240 KQYVVAEPEIQEEEIDGVD-FIIIASDGLWNVISNRDAVAMVEH---ITDAEAASRKLIK 295
           K  V AEP++   ++   D F+I+ASDGLW+V+SN++AV +V       D + A+++L+ 
Sbjct: 177 KPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVD 236

Query: 296 EAYARGSSDNITCVVVRF 313
            A  RGS DNIT VVVR 
Sbjct: 237 LALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|237756 PRK14559, PRK14559, putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|222308 pfam13672, PP2C_2, Protein phosphatase 2C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 316
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.95
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.95
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.9
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.87
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.83
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.72
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.59
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.67
PRK10693303 response regulator of RpoS; Provisional 83.71
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.8e-50  Score=363.71  Aligned_cols=246  Identities=37%  Similarity=0.585  Sum_probs=212.2

Q ss_pred             eEEEEeccccCCCCCCceEEEeeccc--------CCceeEEEEEEcCCCCchHHHHHHHHHHHHHhcCCCchhhHHHHHH
Q 021191           67 FSYGYSTFKGKRSSMEDFYETSLSEV--------DGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHPDFIKDTKTAVV  138 (316)
Q Consensus        67 ~~~~~~s~~G~r~~neD~~~~~~~~~--------~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~~~~~~~~~~l~  138 (316)
                      +.++..|.+|.|+.|||++++..+..        ......||||||||||+.++++|++.+.+.+.+...+..+++++|.
T Consensus        65 ~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al~  144 (365)
T PLN03145         65 VRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVVS  144 (365)
T ss_pred             eEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHHH
Confidence            68899999999999999987643221        1223579999999999999999999999999887666556788999


Q ss_pred             HHHHHHHHHHHhhhc-ccccCCCCceEEEEEECCeEEEEEccCceEEEecCCceeecCCCCCCCChhhHHHHHHcCCeEE
Q 021191          139 EVFKKTDENYLSEEK-GQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI  217 (316)
Q Consensus       139 ~~~~~~~~~l~~~~~-~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~e~~ri~~~gg~~~  217 (316)
                      ++|.+++.++..... .....+|||++++++.++++|++|+||||+|++++|++++||.||++.++.|++||.+.||.+.
T Consensus       145 ~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~  224 (365)
T PLN03145        145 SAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVY  224 (365)
T ss_pred             HHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCcee
Confidence            999999999865422 2334599999999999999999999999999999999999999999999999999999999885


Q ss_pred             eCCceeecCeeccccccCcCCCCc-------ceeeeeeEEEEEeCC-CcEEEEEcCCCCCCCCHHHHHHHHH----ccCC
Q 021191          218 WAGTWRVGGVLAVSRAFGDRLLKQ-------YVVAEPEIQEEEIDG-VDFIIIASDGLWNVISNRDAVAMVE----HITD  285 (316)
Q Consensus       218 ~~~~~~~~~~~~~tr~lG~~~~~~-------~~~~~p~i~~~~l~~-~d~llL~SDGl~d~l~~~ei~~i~~----~~~~  285 (316)
                      .   .++++.+.+||+||+..+|.       .++++|++..+++.+ ++|||||||||||+|++++++++++    ...+
T Consensus       225 ~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~  301 (365)
T PLN03145        225 D---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHND  301 (365)
T ss_pred             c---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCC
Confidence            3   36778889999999987763       367899999999998 5577899999999999999866653    4468


Q ss_pred             HHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 021191          286 AEAASRKLIKEAYARGSSDNITCVVVRFEN  315 (316)
Q Consensus       286 ~~~~a~~L~~~a~~~~~~DniTvivv~~~~  315 (316)
                      ++++|+.|+++|+++++.||+|||||+|+.
T Consensus       302 p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~  331 (365)
T PLN03145        302 PVMCSKELVDEALKRKSGDNLAVVVVCFQS  331 (365)
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEEEEEeec
Confidence            999999999999999999999999999964

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-39
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 9e-39
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 1e-38
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-36
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 2e-34
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-34
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 2e-34
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 2e-34
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 2e-34
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 2e-34
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-33
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-32
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 9e-32
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 1e-31
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-31
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-31
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 8e-15
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 4e-13
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 1e-08
2pk0_A250 Structure Of The S. Agalactiae Serine/threonine Pho 1e-08
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 2e-07
2j4o_A401 Structure Of Tab1 Length = 401 2e-07
2pom_A372 Tab1 With Manganese Ion Length = 372 3e-07
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-07
3d8k_A377 Crsytal Structure Of A Phosphatase From A Toxoplasm 2e-05
2j82_A240 Structural Analysis Of The Pp2c Family Phosphatase 5e-05
2y09_A240 The Cyanobacterial Pp2c-Like Phosphatase Tppha Requ 4e-04
2xzv_A240 The Cyanobacterial Pp2c-Like Phosphatase Tppha Requ 4e-04
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score =  157 bits (398), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/296 (36%), Positives = 149/296 (50%), Gaps = 57/296 (19%)
Query: 69  YGYSTFKGKRSSMEDFYET--------SLSEVDGQM-----VAFFGVYDGHGGSRTAEYL 115
           YG+++  G+R  MED   T        S S +DG+        FFGVYDGHGGS+ A Y 
Sbjct: 11  YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 70
Query: 116 KNHLF-----------KNLSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHKDAGSTAS 164
           +  +              LS    +++  K A+   F + D      E    +  GST+ 
Sbjct: 71  RERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEI---ESVAPETVGSTSV 127
Query: 165 TAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVI-WAGTWR 223
            AV+    + VAN GDSR V  R  +A+PLS+DHKPDR DE  RIE AGG VI W G  R
Sbjct: 128 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA-R 186
Query: 224 VGGVLAVSRAFGDRLLKQYVVAEPEIQE-EEIDGVDFIIIASDGLWNVISNRDAVAMVE- 281
           V GVLA+SR+ GDR LK  ++ +PE+   + +   D +I+ASDG+W+V+++ +A  M   
Sbjct: 187 VFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK 246
Query: 282 -----HITDAEA---------------------ASRKLIKEAYARGSSDNITCVVV 311
                H  +A A                     A+  L K A  RGS DNI+ VVV
Sbjct: 247 RILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVV 302
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2PK0|A Chain A, Structure Of The S. Agalactiae Serine/threonine Phosphatase At 2.65 Resolution Length = 250 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma Gondii Length = 377 Back     alignment and structure
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha From Thermosynechococcus Elongatus Length = 240 Back     alignment and structure
>pdb|2Y09|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires Three Metals In The Catalytic Center For Efficient Catalysis Length = 240 Back     alignment and structure
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires Three Metals In The Catalytic Center For Efficient Catalysis Length = 240 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-113
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-112
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-106
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-106
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-106
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-104
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-103
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-97
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 9e-93
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-84
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 3e-70
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 3e-69
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-39
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-25
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-22
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 5e-20
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 4e-19
3rnr_A211 Stage II sporulation E family protein; structural 2e-16
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
 Score =  328 bits (842), Expect = e-113
 Identities = 85/261 (32%), Positives = 141/261 (54%), Gaps = 13/261 (4%)

Query: 63  RTAKFSYGYSTFKGKRSSMEDFYETSLSEVDGQMVAFFGVYDGHGGSRTAEYLKNHLFKN 122
           + +  + G ++  GKR   ED ++          V +F VYDGHGG   A++   H+ K 
Sbjct: 4   KISLENVGCASQIGKRKENEDRFDF---AQLTDEVLYFAVYDGHGGPAAADFCHTHMEKC 60

Query: 123 LSSHPDFIKDTKTAVVEVFKKTDENYLSEEKGQHK----DAGSTASTAVLL-GDRLLVAN 177
           +       K+ +T +   F + D+ + S  +         +G+TA+ A+L  G  L+VA+
Sbjct: 61  IMDLLPKEKNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVAS 120

Query: 178 VGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIW--AGTWRVGGVLAVSRAFG 235
           VGDSR +  R G  + L+IDH P+R DE++RI++ GGFV W   G   V G LA++R+ G
Sbjct: 121 VGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIG 180

Query: 236 DRLLKQY-VVAEPEIQEEEIDGVD--FIIIASDGLWNVISNRDAVAMVEHITDAEAASRK 292
           D  LK   V+AEPE +  ++   D  F+++ +DG+  ++++++    V    D   A+  
Sbjct: 181 DLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHA 240

Query: 293 LIKEAYARGSSDNITCVVVRF 313
           + ++A   G+ DN T VVV F
Sbjct: 241 VTEQAIQYGTEDNSTAVVVPF 261
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.9
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.89
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.8
3f79_A255 Probable two-component response regulator; adaptor 99.8
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.41
3eq2_A394 Probable two-component response regulator; adaptor 98.86
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=4.7e-51  Score=371.54  Aligned_cols=248  Identities=38%  Similarity=0.566  Sum_probs=219.1

Q ss_pred             EEEEeccccCCCCCCceEEEeeccc------------------CCceeEEEEEEcCCCCchHHHHHHHHHHHHHhcCC--
Q 021191           68 SYGYSTFKGKRSSMEDFYETSLSEV------------------DGQMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHP--  127 (316)
Q Consensus        68 ~~~~~s~~G~r~~neD~~~~~~~~~------------------~~~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~--  127 (316)
                      .||..|.+|+|..|||++.+.....                  ......||+|||||||+.++++|++.+++.|.+..  
T Consensus        15 ~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~   94 (337)
T 3qn1_B           15 LWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIER   94 (337)
T ss_dssp             CEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHh
Confidence            4899999999999999998854321                  11256899999999999999999999988876531  


Q ss_pred             ------------CchhhHHHHHHHHHHHHHHHHHhhh-------------cccccCCCCceEEEEEECCeEEEEEccCce
Q 021191          128 ------------DFIKDTKTAVVEVFKKTDENYLSEE-------------KGQHKDAGSTASTAVLLGDRLLVANVGDSR  182 (316)
Q Consensus       128 ------------~~~~~~~~~l~~~~~~~~~~l~~~~-------------~~~~~~~gtT~~~~~i~~~~l~~anvGDsr  182 (316)
                                  .....+.+.|+++|..++.++....             ......+|||++++++.++++|++|+||||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR  174 (337)
T 3qn1_B           95 IKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR  174 (337)
T ss_dssp             TC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCE
T ss_pred             hhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcE
Confidence                        1124578999999999999987643             122356899999999999999999999999


Q ss_pred             EEEecCCceeecCCCCCCCChhhHHHHHHcCCeEEeCCceeecCeeccccccCcCCCCcceeeeeeEEEEEeCC-CcEEE
Q 021191          183 VVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAFGDRLLKQYVVAEPEIQEEEIDG-VDFII  261 (316)
Q Consensus       183 ~~l~r~g~~~~lt~dh~~~~~~e~~ri~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~~~~~~~~p~i~~~~l~~-~d~ll  261 (316)
                      +|++|+|++++||.||++.++.|+.||...+|.+.....+++++.+.+||+||+..+|+.++++|++..+++.+ +|+||
T Consensus       175 ~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d~ll  254 (337)
T 3qn1_B          175 AVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLI  254 (337)
T ss_dssp             EEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEE
T ss_pred             EEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCCCEEE
Confidence            99999999999999999999999999999999999888899999999999999999999999999999999855 99999


Q ss_pred             EEcCCCCCCCCHHHHHHHHHc---------------------cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 021191          262 IASDGLWNVISNRDAVAMVEH---------------------ITDAEAASRKLIKEAYARGSSDNITCVVVRFEN  315 (316)
Q Consensus       262 L~SDGl~d~l~~~ei~~i~~~---------------------~~~~~~~a~~L~~~a~~~~~~DniTvivv~~~~  315 (316)
                      ||||||||+|+++|+.++++.                     ..+++.+|+.|++.|+.+|+.||+|||||+|+.
T Consensus       255 L~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~  329 (337)
T 3qn1_B          255 LASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKA  329 (337)
T ss_dssp             EECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCS
T ss_pred             EEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecC
Confidence            999999999999999999975                     346789999999999999999999999999964
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 316
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 1e-56
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-32
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 1e-56
 Identities = 87/277 (31%), Positives = 129/277 (46%), Gaps = 29/277 (10%)

Query: 66  KFSYGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDGHGGSRTAEYLKNHLFKNLS 124
              YG S+ +G R  MED +   +    G +  +FF VYDGH GS+ A+Y   HL  +++
Sbjct: 20  GLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHIT 79

Query: 125 SHPDFIKDTKTAVVEVFKK----------TDENYLSEEKGQHKDAGSTASTAVLLGDRLL 174
           ++ DF        VE  K                +SE+K     +GSTA   ++      
Sbjct: 80  NNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 139

Query: 175 VANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEEAGGFVIWAGTWRVGGVLAVSRAF 234
             N GDSR +  R       + DHKP    E++RI+ AGG V+     RV G LAVSRA 
Sbjct: 140 FINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI---QRVNGSLAVSRAL 196

Query: 235 GDRLLK---------QYVVAEPEIQEEEI--DGVDFIIIASDGLWNVISNRDAVAMVEHI 283
           GD   K         Q V  EPE+ + E   +   FII+A DG+W+V+ N +    V   
Sbjct: 197 GDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSR 256

Query: 284 ----TDAEAASRKLIKEAYARGSSDNITCVVVRFENS 316
                D E    +++     +GS DN++ +++ F N+
Sbjct: 257 LEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-52  Score=370.63  Aligned_cols=250  Identities=34%  Similarity=0.544  Sum_probs=220.3

Q ss_pred             CCCceEEEEeccccCCCCCCceEEEeecccCC-ceeEEEEEEcCCCCchHHHHHHHHHHHHHhcCC--------CchhhH
Q 021191           63 RTAKFSYGYSTFKGKRSSMEDFYETSLSEVDG-QMVAFFGVYDGHGGSRTAEYLKNHLFKNLSSHP--------DFIKDT  133 (316)
Q Consensus        63 ~~~~~~~~~~s~~G~r~~neD~~~~~~~~~~~-~~~~~~~V~DG~GG~~~a~~a~~~~~~~l~~~~--------~~~~~~  133 (316)
                      ...++.||++|.+|+|+.|||++.+.....++ ....||||||||||+.+++++++.+.+.|.+..        ....++
T Consensus        17 ~~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~   96 (295)
T d1a6qa2          17 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENV   96 (295)
T ss_dssp             EETTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHH
T ss_pred             cCCceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHH
Confidence            44679999999999999999999886654443 457899999999999999999999999987652        233568


Q ss_pred             HHHHHHHHHHHHHHHHhh--hcccccCCCCceEEEEEECCeEEEEEccCceEEEecCCceeecCCCCCCCChhhHHHHHH
Q 021191          134 KTAVVEVFKKTDENYLSE--EKGQHKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEE  211 (316)
Q Consensus       134 ~~~l~~~~~~~~~~l~~~--~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~e~~ri~~  211 (316)
                      .++|+++|.++++.+...  .......+|||++++++.++++|+||+||||+|+++++++++||.||++.++.|++|+..
T Consensus        97 ~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~~  176 (295)
T d1a6qa2          97 KNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN  176 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhHhh
Confidence            899999999999887643  334456789999999999999999999999999999999999999999999999999999


Q ss_pred             cCCeEEeCCceeecCeeccccccCcCCCC---------cceeeeeeEEEEEeCC--CcEEEEEcCCCCCCCCHHHHHHHH
Q 021191          212 AGGFVIWAGTWRVGGVLAVSRAFGDRLLK---------QYVVAEPEIQEEEIDG--VDFIIIASDGLWNVISNRDAVAMV  280 (316)
Q Consensus       212 ~gg~~~~~~~~~~~~~~~~tr~lG~~~~~---------~~~~~~p~i~~~~l~~--~d~llL~SDGl~d~l~~~ei~~i~  280 (316)
                      .||.+..   +|.+|.+.+||++|+..+|         ++++++|++..+++..  +++||||||||||.|+++|+.+++
T Consensus       177 ~gg~v~~---~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v  253 (295)
T d1a6qa2         177 AGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV  253 (295)
T ss_dssp             TTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHH
T ss_pred             cCCcccc---cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHH
Confidence            9999863   4788999999999999887         4589999999999853  669999999999999999999998


Q ss_pred             Hc----cCCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 021191          281 EH----ITDAEAASRKLIKEAYARGSSDNITCVVVRFEN  315 (316)
Q Consensus       281 ~~----~~~~~~~a~~L~~~a~~~~~~DniTvivv~~~~  315 (316)
                      +.    ..+++.+|+.|++.|+++++.||+|||||+|++
T Consensus       254 ~~~~~~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~  292 (295)
T d1a6qa2         254 RSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPN  292 (295)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTT
T ss_pred             HHHhhcCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccC
Confidence            65    368999999999999999999999999999975
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure