BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021192
(316 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255546479|ref|XP_002514299.1| Protein cbxX, chromosomal, putative [Ricinus communis]
gi|223546755|gb|EEF48253.1| Protein cbxX, chromosomal, putative [Ricinus communis]
Length = 481
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/298 (86%), Positives = 282/298 (94%), Gaps = 1/298 (0%)
Query: 6 DRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
D+RSRS+K T IHG AQSGDLLAFQ+LLR NPSLLNERNPVMAQTPLHVSAG N+AEIV
Sbjct: 7 DQRSRSSKQVTTIHGFAQSGDLLAFQKLLRVNPSLLNERNPVMAQTPLHVSAGNNRAEIV 66
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
K+LLEW G +KVELEA+NMYGETPLHMAAKNGCNEAA+LLLAHGAF+E+KANNGMTPLHL
Sbjct: 67 KTLLEWQGPEKVELEAKNMYGETPLHMAAKNGCNEAARLLLAHGAFVESKANNGMTPLHL 126
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRK 184
+VWYSIRS+D++TVKTLLEYNADCSAKDNEG TP++HLS GPGS KLR+LL WH +EQRK
Sbjct: 127 AVWYSIRSDDFSTVKTLLEYNADCSAKDNEGMTPMNHLSRGPGSEKLRQLLQWHIDEQRK 186
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RRALEACSETKAKM+ELEN LSNIVGLHELKIQLRKWAKGMLLDERR ALGLKVG RRPP
Sbjct: 187 RRALEACSETKAKMEELENALSNIVGLHELKIQLRKWAKGMLLDERRMALGLKVGVRRPP 246
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
HMAFLGNPGTGKTMVARILGRLL++VGILPTDRVTEVQRTDLVGEFVGHTGPKTR+++
Sbjct: 247 HMAFLGNPGTGKTMVARILGRLLHLVGILPTDRVTEVQRTDLVGEFVGHTGPKTRKKI 304
>gi|356520543|ref|XP_003528921.1| PREDICTED: protein CbxX, chromosomal-like [Glycine max]
Length = 480
Score = 531 bits (1367), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/300 (82%), Positives = 282/300 (94%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
++QD+RSR AKPATIHGCA SGDL+ QRLLR+NPSLLNERNPVMAQTPLHVSAG+N+ E
Sbjct: 4 RSQDQRSRPAKPATIHGCALSGDLVGLQRLLRDNPSLLNERNPVMAQTPLHVSAGHNRTE 63
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
IVK LL+W G DKVE+EA+NMYGETPLHMAAKNGCNEAA+LLLA GA +EA+ANNGMTPL
Sbjct: 64 IVKFLLDWQGTDKVEMEAKNMYGETPLHMAAKNGCNEAAQLLLACGATVEARANNGMTPL 123
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VWYS+R+E++ TVKTLLEYNADCSAKD+EG TPL+HLS GPG+ KLRELLLWH EEQ
Sbjct: 124 HLAVWYSLRAEEFLTVKTLLEYNADCSAKDDEGMTPLNHLSQGPGTEKLRELLLWHLEEQ 183
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RK+RA+EACSETKAKMDELE ELSNIVGL++LK+QLRKWAKGMLLDE+R++LGL VG RR
Sbjct: 184 RKQRAIEACSETKAKMDELEKELSNIVGLNDLKVQLRKWAKGMLLDEKRRSLGLHVGRRR 243
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PPHMAFLGNPGTGKTMVARILG+LL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 244 PPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 303
>gi|356531267|ref|XP_003534199.1| PREDICTED: protein CbxX, chromosomal-like [Glycine max]
Length = 484
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 244/300 (81%), Positives = 280/300 (93%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
++QD+RSR AK ATIHGCA SGDL+ QRLLR+NPSLLNERNPVMAQTPLHVSAG+N+ E
Sbjct: 8 RSQDQRSRPAKAATIHGCALSGDLVGLQRLLRDNPSLLNERNPVMAQTPLHVSAGHNRTE 67
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
IVK LL+W G DKVE+EA+NMYGETPLHMAAKNGCN+AA+LLLA GA +EA+ANNGMTPL
Sbjct: 68 IVKFLLDWQGADKVEMEAKNMYGETPLHMAAKNGCNKAAQLLLARGAIVEARANNGMTPL 127
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VWYS+R+E++ TVKTLLEYNADCSAKD+EG TPL+HLS GPG+ KLRELLLWH EEQ
Sbjct: 128 HLAVWYSLRAEEFLTVKTLLEYNADCSAKDDEGMTPLNHLSQGPGTEKLRELLLWHLEEQ 187
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RK+RA+EACSETKAKMDELE +LSNIVGL++LK+QLRKWAKGMLLDE+R++LGL VG RR
Sbjct: 188 RKQRAIEACSETKAKMDELEKQLSNIVGLNDLKVQLRKWAKGMLLDEKRRSLGLHVGRRR 247
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PPHMAFLGNPGTGKTMVARILG+LL+ VGILPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 248 PPHMAFLGNPGTGKTMVARILGKLLHTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 307
>gi|225445236|ref|XP_002280965.1| PREDICTED: caseinolytic peptidase B protein homolog [Vitis
vinifera]
gi|297738825|emb|CBI28070.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/302 (82%), Positives = 279/302 (92%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
MQ+ D+RSRS+KP TIHGCAQSGDLLA Q+LLR NPSLLN+RNPVMAQTPLHVS+GYN
Sbjct: 1 MQRPLDQRSRSSKPTTIHGCAQSGDLLALQKLLRGNPSLLNDRNPVMAQTPLHVSSGYNN 60
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
EIVK LL W G +KVELEA+NMYGETPLHMAAKNGCN AA+LLLAHGA +EAKANNGMT
Sbjct: 61 VEIVKFLLNWQGPEKVELEAKNMYGETPLHMAAKNGCNAAAQLLLAHGAIVEAKANNGMT 120
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
PLHL+VWYS+R+ED +TVKTLL+YNADCS+KDNEG TPL+HLS GPGS KLRELL + +
Sbjct: 121 PLHLAVWYSLRAEDCSTVKTLLDYNADCSSKDNEGMTPLNHLSQGPGSEKLRELLHRYLD 180
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQ KRRALEACSETKAKMDELE+ LSNIVGL++LK QLR+WAKGMLLDERRKALGLKVG+
Sbjct: 181 EQIKRRALEACSETKAKMDELEDALSNIVGLNDLKSQLRRWAKGMLLDERRKALGLKVGS 240
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
R+PPHMAFLGNPGTGKTMVAR+LGRLL+MVG+LPTD+VTEVQRTDLVGEFVGHTGPKTRR
Sbjct: 241 RKPPHMAFLGNPGTGKTMVARVLGRLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRR 300
Query: 301 RV 302
++
Sbjct: 301 KI 302
>gi|357500765|ref|XP_003620671.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|355495686|gb|AES76889.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 479
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 245/302 (81%), Positives = 282/302 (93%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
M ++QD+RSR AKPATIH CA SGDL+ Q+LLR+NPSLLN++NPVMA TPLHVSAG N+
Sbjct: 1 MNRSQDQRSRPAKPATIHSCALSGDLIGLQKLLRDNPSLLNDKNPVMAHTPLHVSAGNNR 60
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
A+IVK LLEW G+++VE+EA+NMYGETPLHMAAKNGC+EAA+LLLAHGA IEA+ANNGMT
Sbjct: 61 ADIVKFLLEWQGSERVEIEAKNMYGETPLHMAAKNGCSEAAQLLLAHGASIEARANNGMT 120
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
PLHL+VW+S+R+E++ TVKTLLE+NADCSAKDNEG TPL+HLS GPG+ KLRELL WH E
Sbjct: 121 PLHLAVWHSLRAEEFLTVKTLLEHNADCSAKDNEGMTPLNHLSQGPGNDKLRELLNWHLE 180
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQRKRRA++ACSETKAKMDELE ELSNIVGL++LKIQLRKWAKGMLLDERR+ALGL VG
Sbjct: 181 EQRKRRAIKACSETKAKMDELEKELSNIVGLNDLKIQLRKWAKGMLLDERRRALGLHVGT 240
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
RRPPHMAFLGNPGTGKTMVARILGRLL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTR+
Sbjct: 241 RRPPHMAFLGNPGTGKTMVARILGRLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRK 300
Query: 301 RV 302
++
Sbjct: 301 KI 302
>gi|224119764|ref|XP_002331155.1| predicted protein [Populus trichocarpa]
gi|222873238|gb|EEF10369.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/304 (81%), Positives = 279/304 (91%), Gaps = 1/304 (0%)
Query: 1 MQKN-QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
MQ+N Q + SR +KPATIH CAQSGDLL FQRLL NP LLNERNPVMAQTPLHVSAGYN
Sbjct: 1 MQRNRQGQGSRISKPATIHSCAQSGDLLGFQRLLSGNPYLLNERNPVMAQTPLHVSAGYN 60
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
+AEI+K LL+W G +KVELE +NMYGETPLHMAAKNGC+EAA+LLLAHGA IEAKANNGM
Sbjct: 61 RAEIIKFLLDWQGAEKVELEPRNMYGETPLHMAAKNGCSEAARLLLAHGAIIEAKANNGM 120
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
TPLHL+VWYSIR ED++TVKTLLEYNADCSA+DNEG TPL+HLS GP S +L +LL WH
Sbjct: 121 TPLHLAVWYSIRVEDHSTVKTLLEYNADCSAEDNEGMTPLNHLSPGPRSEELCKLLQWHL 180
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
EEQRKR+ALEACS+TKAKMDELE+ LSN+VGLH+LKIQLRKWAKGMLLDERR+ALG+KVG
Sbjct: 181 EEQRKRKALEACSKTKAKMDELEDALSNVVGLHDLKIQLRKWAKGMLLDERRRALGMKVG 240
Query: 240 ARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
RRPPHMAFLG+PGTGKTMVARILGRLL+MVG+LPTD+VTEVQRTDLVGEFVGHTGPKTR
Sbjct: 241 LRRPPHMAFLGSPGTGKTMVARILGRLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTR 300
Query: 300 RRVG 303
R++
Sbjct: 301 RKIA 304
>gi|224143544|ref|XP_002324992.1| predicted protein [Populus trichocarpa]
gi|222866426|gb|EEF03557.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust.
Identities = 246/304 (80%), Positives = 282/304 (92%), Gaps = 2/304 (0%)
Query: 1 MQKN-QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
MQ++ QD SRS+KPATIH AQSGDLL FQRLLR +PSLLNERNPVMAQTPLHVSAGYN
Sbjct: 1 MQRDRQDHGSRSSKPATIHSYAQSGDLLGFQRLLRGDPSLLNERNPVMAQTPLHVSAGYN 60
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
+A+I+K LL+W G +KVELE +NM +TPLHMAAKNGC EAA+LLLAHGAF+EAKANNGM
Sbjct: 61 RADIIKFLLDWQGAEKVELEPRNM-AKTPLHMAAKNGCTEAARLLLAHGAFVEAKANNGM 119
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
TPLHL+VWYSIR+ED++TVKTLLEYNADCSA+DNEG TPL+HLS GPGS ++R+LL WH
Sbjct: 120 TPLHLAVWYSIRAEDHSTVKTLLEYNADCSAEDNEGMTPLNHLSPGPGSEEVRKLLHWHL 179
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
EEQRKR+ALEACS+TKAKMDELE+ L+N+VGLHELK+QLRKWAKGMLLDERR+ALG+KVG
Sbjct: 180 EEQRKRKALEACSKTKAKMDELEDALTNVVGLHELKVQLRKWAKGMLLDERRRALGMKVG 239
Query: 240 ARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
RRPPHMAFLG+PGTGKTMVARILGRLL+MVG+LPTD+VTEVQRTDLVGEFVGHTGPKTR
Sbjct: 240 MRRPPHMAFLGSPGTGKTMVARILGRLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTR 299
Query: 300 RRVG 303
R++
Sbjct: 300 RKIA 303
>gi|449459838|ref|XP_004147653.1| PREDICTED: ESX-1 secretion system protein EccA1-like [Cucumis
sativus]
gi|449498823|ref|XP_004160644.1| PREDICTED: ESX-1 secretion system protein EccA1-like [Cucumis
sativus]
Length = 479
Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust.
Identities = 244/302 (80%), Positives = 271/302 (89%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
MQK QD+R RS KP TIHG AQSGD+L+ Q+LLRENP LLNERNP M QTPLHVSAGYN+
Sbjct: 1 MQKPQDQRLRSTKPTTIHGYAQSGDILSLQKLLRENPGLLNERNPFMGQTPLHVSAGYNR 60
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
AEIV LL W G + VELEA+NMYGETPLHMAAKNGCN+AA++LLAHGAF+EAKANNGMT
Sbjct: 61 AEIVTFLLAWKGPENVELEAKNMYGETPLHMAAKNGCNDAARVLLAHGAFVEAKANNGMT 120
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
PLHL+VWYS++SED TVKTLL+YNADCSA D EG TPL+HLS S KLRELL H E
Sbjct: 121 PLHLAVWYSLQSEDCETVKTLLDYNADCSATDEEGMTPLNHLSQSSCSKKLRELLNRHLE 180
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQRK++A+EACSETKAKM ELENELS+IVGLHELKIQL+KWAKGMLLDERR+ALGLKVG
Sbjct: 181 EQRKQKAIEACSETKAKMKELENELSHIVGLHELKIQLQKWAKGMLLDERRRALGLKVGT 240
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
RR PHMAFLGNPGTGKTMVARILG+LL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR
Sbjct: 241 RRSPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRR 300
Query: 301 RV 302
++
Sbjct: 301 KI 302
>gi|21553510|gb|AAM62603.1| rubisco expression protein, putative [Arabidopsis thaliana]
Length = 481
Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/301 (77%), Positives = 259/301 (86%)
Query: 2 QKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKA 61
Q +R RSA+P TIH CA SGDL+A QRLLR+NPSLLNERNPVM TPLHVSAG
Sbjct: 4 QNGGGQRLRSARPTTIHDCALSGDLIALQRLLRDNPSLLNERNPVMYHTPLHVSAGNGNV 63
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+IVK LL W G+DKVELEA N YGETPLHMAAKNGCNEAAKLLL GAFIEAKA+NGMTP
Sbjct: 64 DIVKYLLAWTGSDKVELEAMNTYGETPLHMAAKNGCNEAAKLLLESGAFIEAKASNGMTP 123
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
LHL+VWYSI +++ +TVKTLL++NADCSAKDNEG TPLDHL G GS KLRELL W +E
Sbjct: 124 LHLAVWYSITAKEISTVKTLLDHNADCSAKDNEGMTPLDHLPQGQGSEKLRELLRWFLQE 183
Query: 182 QRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGAR 241
QRKR ALE C +TKAKM+ LE+ELSNIVGL ELK QLRKWAKGMLLDERR+ALGL +G R
Sbjct: 184 QRKRSALEQCGKTKAKMELLEDELSNIVGLSELKTQLRKWAKGMLLDERRRALGLNIGTR 243
Query: 242 RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
RPPHMAFLGNPGTGKTMVAR+LG+LL VGILPTD+VTEVQRTDLVGEFVGHTGPKTRR+
Sbjct: 244 RPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRK 303
Query: 302 V 302
+
Sbjct: 304 I 304
>gi|18404228|ref|NP_566752.1| AAA-type ATPase family protein / ankyrin repeat family protein
[Arabidopsis thaliana]
gi|13507553|gb|AAK28639.1|AF360342_1 putative rubisco expression protein [Arabidopsis thaliana]
gi|15293291|gb|AAK93756.1| putative rubisco expression protein [Arabidopsis thaliana]
gi|332643395|gb|AEE76916.1| AAA-type ATPase family protein / ankyrin repeat family protein
[Arabidopsis thaliana]
Length = 481
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/301 (77%), Positives = 259/301 (86%)
Query: 2 QKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKA 61
Q +R RSA+P TIH CA SGDL+A QRLL++NPSLLNERNPVM TPLHVSAG
Sbjct: 4 QNGGGQRLRSARPTTIHDCALSGDLIALQRLLKDNPSLLNERNPVMYHTPLHVSAGNGNV 63
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+IVK LL W G+DKVELEA N YGETPLHMAAKNGCNEAAKLLL GAFIEAKA+NGMTP
Sbjct: 64 DIVKYLLAWTGSDKVELEAMNTYGETPLHMAAKNGCNEAAKLLLESGAFIEAKASNGMTP 123
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
LHL+VWYSI +++ +TVKTLL++NADCSAKDNEG TPLDHL G GS KLRELL W +E
Sbjct: 124 LHLAVWYSITAKEISTVKTLLDHNADCSAKDNEGMTPLDHLPQGQGSEKLRELLRWFLQE 183
Query: 182 QRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGAR 241
QRKR ALE C +TKAKM+ LE+ELSNIVGL ELK QLRKWAKGMLLDERR+ALGL +G R
Sbjct: 184 QRKRSALEQCGKTKAKMELLEDELSNIVGLSELKTQLRKWAKGMLLDERRRALGLNIGTR 243
Query: 242 RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
RPPHMAFLGNPGTGKTMVAR+LG+LL VGILPTD+VTEVQRTDLVGEFVGHTGPKTRR+
Sbjct: 244 RPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRK 303
Query: 302 V 302
+
Sbjct: 304 I 304
>gi|297835546|ref|XP_002885655.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331495|gb|EFH61914.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 497
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 233/317 (73%), Positives = 259/317 (81%), Gaps = 16/317 (5%)
Query: 2 QKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKA 61
Q +R RSA+P TIH CA SGDL+A QRLL++NPSLLNERNPVM TPLHVSAG
Sbjct: 4 QNGGGQRLRSARPTTIHDCALSGDLIALQRLLKDNPSLLNERNPVMYHTPLHVSAGNGNV 63
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKAN----- 116
+IVK LL W G++KVELEA N YGETPLHMAAKNGCNEAAKLLL GAFIEAKA+
Sbjct: 64 DIVKYLLAWTGSEKVELEAMNTYGETPLHMAAKNGCNEAAKLLLERGAFIEAKASCGKVG 123
Query: 117 -----------NGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
NGMTPLHL+VWYSI ++D +TVKTLL++NADCSAKDNEG TPLDHL G
Sbjct: 124 SFGLIWFWLMQNGMTPLHLAVWYSITAKDISTVKTLLDHNADCSAKDNEGMTPLDHLPQG 183
Query: 166 PGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGM 225
GS KLRELL W +EQRKR ALE C +TKAKM+ LE+ELSNIVGL ELK QLRKWAKGM
Sbjct: 184 QGSEKLRELLRWFLQEQRKRSALEQCGKTKAKMELLEDELSNIVGLSELKTQLRKWAKGM 243
Query: 226 LLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTD 285
LLDERR+ALGL +G RRPPHMAFLGNPGTGKTMVAR+LG+LL VGILPTD+VTEVQRTD
Sbjct: 244 LLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNTVGILPTDKVTEVQRTD 303
Query: 286 LVGEFVGHTGPKTRRRV 302
LVGEFVGHTGPKTRR++
Sbjct: 304 LVGEFVGHTGPKTRRKI 320
>gi|9294047|dbj|BAB02004.1| unnamed protein product [Arabidopsis thaliana]
Length = 468
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/273 (79%), Positives = 240/273 (87%)
Query: 30 QRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPL 89
+RLL++NPSLLNERNPVM TPLHVSAG +IVK LL W G+DKVELEA N YGETPL
Sbjct: 19 ERLLKDNPSLLNERNPVMYHTPLHVSAGNGNVDIVKYLLAWTGSDKVELEAMNTYGETPL 78
Query: 90 HMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCS 149
HMAAKNGCNEAAKLLL GAFIEAKA+NGMTPLHL+VWYSI +++ +TVKTLL++NADCS
Sbjct: 79 HMAAKNGCNEAAKLLLESGAFIEAKASNGMTPLHLAVWYSITAKEISTVKTLLDHNADCS 138
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIV 209
AKDNEG TPLDHL G GS KLRELL W +EQRKR ALE C +TKAKM+ LE+ELSNIV
Sbjct: 139 AKDNEGMTPLDHLPQGQGSEKLRELLRWFLQEQRKRSALEQCGKTKAKMELLEDELSNIV 198
Query: 210 GLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYM 269
GL ELK QLRKWAKGMLLDERR+ALGL +G RRPPHMAFLGNPGTGKTMVAR+LG+LL
Sbjct: 199 GLSELKTQLRKWAKGMLLDERRRALGLNIGTRRPPHMAFLGNPGTGKTMVARVLGKLLNT 258
Query: 270 VGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VGILPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 259 VGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 291
>gi|116789157|gb|ABK25136.1| unknown [Picea sitchensis]
Length = 484
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 211/302 (69%), Positives = 258/302 (85%), Gaps = 1/302 (0%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
+Q QD+R RS +P+++H AQ GDL++ + L+E+PSLLN RNPV+AQTPLHV+A +NK
Sbjct: 7 IQAMQDKRPRS-RPSSLHNFAQYGDLISLNKKLQESPSLLNARNPVIAQTPLHVAAAHNK 65
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
EIVK LL WPG +K+ELEA+NMYGETPLHMAAKNGC E +LLL H A IEA+ANNGMT
Sbjct: 66 KEIVKFLLNWPGPEKLELEAKNMYGETPLHMAAKNGCTEVLRLLLEHNADIEARANNGMT 125
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
PLHL+VW+S+R ED +TV+ LL+Y+AD + KDNEG TPL HLS GP + KL+ LL H +
Sbjct: 126 PLHLAVWHSLRVEDCSTVEALLQYHADINTKDNEGMTPLSHLSQGPSNQKLQSLLQVHLD 185
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQRKR+A EAC ++K+KM ELE ELS +VGLHELK+QLR WAKGM+LDE+R+ALGLKV A
Sbjct: 186 EQRKRKAREACEKSKSKMSELEVELSRVVGLHELKVQLRTWAKGMILDEKRRALGLKVAA 245
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
RR PHMAFLGNPGTGKTMVARILG+LL+MVG+LP+D+VTEVQRTDLVGEFVGHTGPKTR+
Sbjct: 246 RRSPHMAFLGNPGTGKTMVARILGKLLHMVGVLPSDKVTEVQRTDLVGEFVGHTGPKTRK 305
Query: 301 RV 302
++
Sbjct: 306 KI 307
>gi|357141547|ref|XP_003572263.1| PREDICTED: probable S-acyltransferase At2g14255-like [Brachypodium
distachyon]
Length = 483
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/302 (66%), Positives = 247/302 (81%), Gaps = 1/302 (0%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
M +Q+ R R AK TIHG ++GDL QR L+ENP+LLN++NPVM+QTPLHV+AGYN
Sbjct: 1 MPGSQNGRPRPAKAETIHGLVRAGDLAGVQRKLQENPALLNDKNPVMSQTPLHVAAGYNN 60
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
+IVK LL+W G D VELEA+NMYGETPLHMA KN E+AKLLL HG + EAKANNGM+
Sbjct: 61 TDIVKFLLDWQGADAVELEAKNMYGETPLHMAVKNSSCESAKLLLEHGVYTEAKANNGMS 120
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
PLHL+VW+++++ D +TV LL YNADC AKD+EGK PL+H+ G G+ KL +LL + E
Sbjct: 121 PLHLAVWHALQTGDCSTVTVLLSYNADCYAKDDEGKIPLNHIPGGAGNEKLLQLLTRYME 180
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQRKR+A+ +C E +A M E E +S IVGL ELK+QLR+WA+GML DE+R+A+GL + +
Sbjct: 181 EQRKRKAVMSCHEQQA-MAEFEEAISQIVGLQELKMQLRRWARGMLFDEKRRAMGLGIAS 239
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
RR PHMAF+GNPGTGKTMVARILG+LLYMVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR
Sbjct: 240 RRAPHMAFVGNPGTGKTMVARILGKLLYMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRR 299
Query: 301 RV 302
++
Sbjct: 300 KI 301
>gi|115445451|ref|NP_001046505.1| Os02g0266300 [Oryza sativa Japonica Group]
gi|50251964|dbj|BAD27899.1| putative CbxX protein [Oryza sativa Japonica Group]
gi|113536036|dbj|BAF08419.1| Os02g0266300 [Oryza sativa Japonica Group]
gi|215740885|dbj|BAG97041.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 485
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/299 (67%), Positives = 246/299 (82%), Gaps = 1/299 (0%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
+Q+ R R AK TIHG A++GDL QR L+ENP+L+N+RNPVM+QTPLHV+AGYN I
Sbjct: 6 SQNGRPRPAKAETIHGLARAGDLAGVQRKLQENPALINDRNPVMSQTPLHVAAGYNNTGI 65
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK LL++ G DKVELEA+NMYGETPLHMA KN E+AKLLL GA IEAKANNGM PLH
Sbjct: 66 VKFLLDFQGTDKVELEAKNMYGETPLHMAVKNSSCESAKLLLERGAHIEAKANNGMAPLH 125
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQR 183
L+VW++++S D +TV LL YNADC AKD+EGK P +H+ G G+ KL++LL H EEQR
Sbjct: 126 LAVWHALQSGDCSTVSVLLSYNADCYAKDDEGKIPSNHIPGGAGNEKLQKLLTRHMEEQR 185
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
KR+AL +C E KA M E E +S IVGL +LK+QLR+WA+GML DE+R+A+GL + +RR
Sbjct: 186 KRKALMSCREGKA-MAEFEEAISQIVGLQDLKMQLRRWARGMLFDEKRRAMGLGIASRRA 244
Query: 244 PHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTMVARILG+LL+MVG+LPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 245 PHMAFLGNPGTGKTMVARILGKLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 303
>gi|242064728|ref|XP_002453653.1| hypothetical protein SORBIDRAFT_04g009900 [Sorghum bicolor]
gi|241933484|gb|EES06629.1| hypothetical protein SORBIDRAFT_04g009900 [Sorghum bicolor]
Length = 485
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 239/300 (79%), Gaps = 1/300 (0%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
+N R R K TIHG A++GDL QR LRENP+LLN++NPVM QTPLHV+AGYN E
Sbjct: 5 QNGGPRPRPVKAETIHGLARAGDLAGVQRKLRENPALLNDKNPVMCQTPLHVAAGYNNTE 64
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
IVK LL G + V+LEA+NMYGETPLHMA KN + LLL HGA IEAKANNGMTPL
Sbjct: 65 IVKFLLNQQGTETVDLEAKNMYGETPLHMAVKNSSCGSTNLLLEHGAHIEAKANNGMTPL 124
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VW+++++ D +TV LL YNADC AKD+EGK PL+H+ G GS KL +LL H EEQ
Sbjct: 125 HLAVWHALQAGDCSTVSVLLSYNADCFAKDDEGKMPLNHIPGGAGSEKLLKLLTHHMEEQ 184
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RK++AL +C E +A M E E +S IVGL ELK+QLR+WA+GML DE+R+A+GL + RR
Sbjct: 185 RKKKALMSCVEGQA-MSEFEEAISQIVGLQELKMQLRRWARGMLFDEKRRAMGLGIARRR 243
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTMVARILG+LL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 244 APHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 303
>gi|413925926|gb|AFW65858.1| hypothetical protein ZEAMMB73_374157 [Zea mays]
Length = 330
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 235/300 (78%), Gaps = 1/300 (0%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
+N R R K TIH A++GDL QR L ENPSLLN++NPVM QTPLHV+AGYN E
Sbjct: 5 QNGGPRPRPVKVETIHDLARAGDLAGVQRKLLENPSLLNDKNPVMCQTPLHVAAGYNNTE 64
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
IVK LL G + V+LEA+NMYGETPLHMA KN + LLL HGA IEAKANNGMTPL
Sbjct: 65 IVKFLLNQQGTETVDLEAKNMYGETPLHMAVKNSSCGSTNLLLEHGAHIEAKANNGMTPL 124
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VW++I++ D++TV LL YN DC KD+EGK PL+H+ G GS KL +LL H EEQ
Sbjct: 125 HLAVWHAIQAGDFSTVSVLLSYNPDCFVKDDEGKMPLNHIPGGAGSEKLLKLLTHHMEEQ 184
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RKR+AL +C E KA M E E +S IVGL ELK+QLR+WA+GM DE+R+A+GL + RR
Sbjct: 185 RKRKALMSCLEGKA-MSEFEEAMSQIVGLQELKMQLRRWARGMFFDEKRRAMGLGIAKRR 243
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTMVARILG+LL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR+V
Sbjct: 244 APHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKV 303
>gi|224029157|gb|ACN33654.1| unknown [Zea mays]
gi|413925927|gb|AFW65859.1| hypothetical protein ZEAMMB73_374157 [Zea mays]
Length = 485
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/300 (66%), Positives = 235/300 (78%), Gaps = 1/300 (0%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
+N R R K TIH A++GDL QR L ENPSLLN++NPVM QTPLHV+AGYN E
Sbjct: 5 QNGGPRPRPVKVETIHDLARAGDLAGVQRKLLENPSLLNDKNPVMCQTPLHVAAGYNNTE 64
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
IVK LL G + V+LEA+NMYGETPLHMA KN + LLL HGA IEAKANNGMTPL
Sbjct: 65 IVKFLLNQQGTETVDLEAKNMYGETPLHMAVKNSSCGSTNLLLEHGAHIEAKANNGMTPL 124
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VW++I++ D++TV LL YN DC KD+EGK PL+H+ G GS KL +LL H EEQ
Sbjct: 125 HLAVWHAIQAGDFSTVSVLLSYNPDCFVKDDEGKMPLNHIPGGAGSEKLLKLLTHHMEEQ 184
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RKR+AL +C E KA M E E +S IVGL ELK+QLR+WA+GM DE+R+A+GL + RR
Sbjct: 185 RKRKALMSCLEGKA-MSEFEEAMSQIVGLQELKMQLRRWARGMFFDEKRRAMGLGIAKRR 243
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTMVARILG+LL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 244 APHMAFLGNPGTGKTMVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 303
>gi|222622570|gb|EEE56702.1| hypothetical protein OsJ_06177 [Oryza sativa Japonica Group]
Length = 469
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/299 (64%), Positives = 234/299 (78%), Gaps = 17/299 (5%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
+Q+ R R AK TIHG A++GDL QR L+ENP+L+N+RNPVM+QTPLHV+AGYN I
Sbjct: 6 SQNGRPRPAKAETIHGLARAGDLAGVQRKLQENPALINDRNPVMSQTPLHVAAGYNNTGI 65
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK LL++ G DKVELEA+NMYGETPLHMA KN E+AKLLL GA IEAKANNGM PLH
Sbjct: 66 VKFLLDFQGTDKVELEAKNMYGETPLHMAVKNSSCESAKLLLERGAHIEAKANNGMAPLH 125
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQR 183
L+VW++++S DCS EGK P +H+ G G+ KL++LL H EEQR
Sbjct: 126 LAVWHALQS-------------GDCS---TEGKIPSNHIPGGAGNEKLQKLLTRHMEEQR 169
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
KR+AL +C E KA M E E +S IVGL +LK+QLR+WA+GML DE+R+A+GL + +RR
Sbjct: 170 KRKALMSCREGKA-MAEFEEAISQIVGLQDLKMQLRRWARGMLFDEKRRAMGLGIASRRA 228
Query: 244 PHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTMVARILG+LL+MVG+LPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 229 PHMAFLGNPGTGKTMVARILGKLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 287
>gi|218190456|gb|EEC72883.1| hypothetical protein OsI_06666 [Oryza sativa Indica Group]
Length = 455
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/299 (63%), Positives = 234/299 (78%), Gaps = 17/299 (5%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
+Q+ R R AK TIHG A++GDL QR L+ENP+L+N+RNPVM+QTPLHV+AGYN I
Sbjct: 6 SQNGRPRPAKAETIHGLARAGDLAGVQRKLQENPALINDRNPVMSQTPLHVAAGYNNTGI 65
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK LL++ G DKVELEA+NMYGETPLHMA KN E+AKLLL GA IEAKANNGM PLH
Sbjct: 66 VKFLLDFQGTDKVELEAKNMYGETPLHMAVKNSSCESAKLLLERGAHIEAKANNGMAPLH 125
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQR 183
L+VW++++S DCS EGK P +H+ G G+ KL++LL H EEQR
Sbjct: 126 LAVWHALQS-------------GDCST---EGKIPSNHIPGGAGNEKLQKLLTRHMEEQR 169
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
+R+AL +C E KA M E E +S IVGL +LK+QLR+WA+GML DE+R+A+GL + +RR
Sbjct: 170 QRKALMSCREGKA-MAEFEEAISQIVGLQDLKMQLRRWARGMLFDEKRRAMGLGIASRRA 228
Query: 244 PHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTMVARILG+LL+MVG+LPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 229 PHMAFLGNPGTGKTMVARILGKLLHMVGVLPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 287
>gi|302754222|ref|XP_002960535.1| hypothetical protein SELMODRAFT_437606 [Selaginella moellendorffii]
gi|300171474|gb|EFJ38074.1| hypothetical protein SELMODRAFT_437606 [Selaginella moellendorffii]
Length = 628
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 180/300 (60%), Positives = 227/300 (75%), Gaps = 7/300 (2%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
RSA+P T H AQSGD+ + LL +NPSL+N RNPVM+QTPL ++A N+ + V+ LLE
Sbjct: 8 RSARPVTCHSLAQSGDIDGLRVLLHQNPSLINSRNPVMSQTPLQMAAASNQDDAVRFLLE 67
Query: 70 WPGNDKVELEAQNM-------YGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
W G ++ +LEA NM YGET LH+AAKNG +A K+LL H A EAKA NGMTPL
Sbjct: 68 WNGPERADLEATNMFLVALSQYGETALHLAAKNGSTDALKVLLKHNARKEAKALNGMTPL 127
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VW S+R++D V+ LLE+NAD S +DNE TPL HL G+ KL+E+L + Q
Sbjct: 128 HLAVWSSVRAQDCKAVEVLLEHNADVSLEDNEKLTPLSHLPKSSGNEKLQEMLERQLDLQ 187
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
R+++A +A S +K KM ELE EL IVGL +LK+QLRKWAKGMLLDE+R++LGL V R+
Sbjct: 188 RRQKAEKALSGSKLKMLELEKELEKIVGLDDLKLQLRKWAKGMLLDEKRRSLGLNVPKRK 247
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTM+AR+L +LL+MVG+L D+V EVQRTDLVGEFVGHTGPKTR+R+
Sbjct: 248 LPHMAFLGNPGTGKTMIARLLAKLLHMVGVLECDKVVEVQRTDLVGEFVGHTGPKTRKRI 307
>gi|302767528|ref|XP_002967184.1| hypothetical protein SELMODRAFT_407995 [Selaginella moellendorffii]
gi|300165175|gb|EFJ31783.1| hypothetical protein SELMODRAFT_407995 [Selaginella moellendorffii]
Length = 567
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/300 (60%), Positives = 226/300 (75%), Gaps = 7/300 (2%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
RSA+P T H AQSGD+ + LL +NPSL+N RNPVM+QTPL ++A N+ + V+ LLE
Sbjct: 8 RSARPVTCHSLAQSGDIDGLRVLLHQNPSLINSRNPVMSQTPLQMAAASNQDDAVRFLLE 67
Query: 70 WPGNDKVELEAQNM-------YGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
W G ++ +LEA NM YGET LH+AAKNG A K+LL H A EAKA NGMTPL
Sbjct: 68 WNGPERADLEATNMFLVALSQYGETALHLAAKNGSTGALKVLLKHNARKEAKALNGMTPL 127
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VW S+R++D V+ LLE+NAD S +DNE TPL HL G+ KL+E+L + Q
Sbjct: 128 HLAVWSSVRAQDCKAVEVLLEHNADVSLEDNEKLTPLSHLPKSSGNEKLQEMLERQLDLQ 187
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
R+++A +A S +K KM ELE EL IVGL +LK+QLRKWAKGMLLDE+R++LGL V R+
Sbjct: 188 RRQKAKKALSGSKLKMLELEKELEKIVGLDDLKLQLRKWAKGMLLDEKRRSLGLNVPKRK 247
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PHMAFLGNPGTGKTM+AR+L +LL+MVG+L D+V EVQRTDLVGEFVGHTGPKTR+R+
Sbjct: 248 LPHMAFLGNPGTGKTMIARLLAKLLHMVGVLECDKVVEVQRTDLVGEFVGHTGPKTRKRI 307
>gi|413925925|gb|AFW65857.1| hypothetical protein ZEAMMB73_374157 [Zea mays]
Length = 287
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 158/254 (62%), Positives = 189/254 (74%), Gaps = 1/254 (0%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
+N R R K TIH A++GDL QR L ENPSLLN++NPVM QTPLHV+AGYN E
Sbjct: 5 QNGGPRPRPVKVETIHDLARAGDLAGVQRKLLENPSLLNDKNPVMCQTPLHVAAGYNNTE 64
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
IVK LL G + V+LEA+NMYGETPLHMA KN + LLL HGA IEAKANNGMTPL
Sbjct: 65 IVKFLLNQQGTETVDLEAKNMYGETPLHMAVKNSSCGSTNLLLEHGAHIEAKANNGMTPL 124
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ 182
HL+VW++I++ D++TV LL YN DC KD+EGK PL+H+ G GS KL +LL H EEQ
Sbjct: 125 HLAVWHAIQAGDFSTVSVLLSYNPDCFVKDDEGKMPLNHIPGGAGSEKLLKLLTHHMEEQ 184
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RKR+AL +C E KA M E E +S IVGL ELK+QLR+WA+GM DE+R+A+GL + RR
Sbjct: 185 RKRKALMSCLEGKA-MSEFEEAMSQIVGLQELKMQLRRWARGMFFDEKRRAMGLGIAKRR 243
Query: 243 PPHMAFLGNPGTGK 256
PHMAFLGNPGTGK
Sbjct: 244 APHMAFLGNPGTGK 257
>gi|255639241|gb|ACU19919.1| unknown [Glycine max]
Length = 255
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 75/78 (96%)
Query: 225 MLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRT 284
MLLDE+R++LGL VG RRPPHMAFLGNPGTGKTMVARILG+LL+ VGILPTD+VTEVQRT
Sbjct: 1 MLLDEKRRSLGLHVGRRRPPHMAFLGNPGTGKTMVARILGKLLHTVGILPTDKVTEVQRT 60
Query: 285 DLVGEFVGHTGPKTRRRV 302
DLVGEFVGHTGPKTRR++
Sbjct: 61 DLVGEFVGHTGPKTRRKI 78
>gi|302528499|ref|ZP_07280841.1| predicted protein [Streptomyces sp. AA4]
gi|302437394|gb|EFL09210.1| predicted protein [Streptomyces sp. AA4]
Length = 1400
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D+L EL ++GL E+K Q+R LD RR+ GL VGAR H+ F GNPGT KT
Sbjct: 1129 LDDLLAELDGMIGLDEVKAQVRALVAETRLDARRRKAGLPVGARSR-HLVFTGNPGTAKT 1187
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR----RRVGHLL 306
VAR++G+L +G+LP+ + EV R DLVGE++G T PKTR R +G LL
Sbjct: 1188 TVARLMGQLYRELGVLPSGHLVEVARPDLVGEYIGQTAPKTREMCERAIGGLL 1240
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A ++EL EL ++GL +K ++R M +D RR+ G+KV A R H+ GNPGT
Sbjct: 570 ASIEELLAELDGMIGLAAVKERVRSLTSEMTIDARRREAGMKV-AVRSRHLLLTGNPGTA 628
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR----RRVGHLL 306
KT VAR+LG++ +G LP V EV RTDLVGE+VG T KTR R VG +L
Sbjct: 629 KTTVARLLGKIYRALGALPKGHVVEVTRTDLVGEYVGQTSLKTRAAVQRAVGGVL 683
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S + + EL EL ++GL +K ++R M +D RR+ G+KV A R H+ F GN
Sbjct: 844 SGPRRSLPELLAELDAMIGLDSVKQRVRSMVDEMAVDARRREAGMKV-AVRSRHLLFTGN 902
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGT KT V+R++G++ +G+LP+ + EV R DLV EF G T PKTR
Sbjct: 903 PGTAKTTVSRLVGQIYRELGVLPSGHLVEVGRGDLVAEFSGQTAPKTR 950
>gi|319645848|ref|ZP_08000078.1| SpoVK protein [Bacillus sp. BT1B_CT2]
gi|317391598|gb|EFV72395.1| SpoVK protein [Bacillus sp. BT1B_CT2]
Length = 198
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Query: 175 LLWHSEEQRKRRALEACSETK-AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKA 233
+L +SE + + +A +E K + + E+E E++ +VG+ E+K +++ + ++++R+
Sbjct: 26 VLANSEAEAEYQAALQKNEAKHSILKEIEREMNTLVGMEEMKRNIKEIYAWIFVNKKREE 85
Query: 234 LGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGH 293
GLK G ++ HM F GNPGTGKT VAR++GRL Y + +L + E +R DLVGE++GH
Sbjct: 86 QGLKAG-KQALHMMFKGNPGTGKTTVARLIGRLFYEMNVLSKGHLIEAERADLVGEYIGH 144
Query: 294 TGPKTR 299
T KTR
Sbjct: 145 TAQKTR 150
>gi|157692413|ref|YP_001486875.1| stage V sporulation protein K [Bacillus pumilus SAFR-032]
gi|194014788|ref|ZP_03053405.1| stage V sporulation protein K [Bacillus pumilus ATCC 7061]
gi|157681171|gb|ABV62315.1| stage V sporulation protein K [Bacillus pumilus SAFR-032]
gi|194013814|gb|EDW23379.1| stage V sporulation protein K [Bacillus pumilus ATCC 7061]
Length = 319
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 188 LEACSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
LEA + +AK + E+E E++++VG+ E+K +++ + ++++R+ GLKVG ++
Sbjct: 34 LEALQKNEAKHSILREIEREMNSLVGMDEMKRNIKEIYAWIFVNQKRQEQGLKVG-KQAL 92
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 93 HMMFKGNPGTGKTTVARLVGKLFFEMNVLSKGHLIEAERGDLVGEYIGHTAQKTR 147
>gi|407980496|ref|ZP_11161281.1| stage V sporulation protein K [Bacillus sp. HYC-10]
gi|407412744|gb|EKF34511.1| stage V sporulation protein K [Bacillus sp. HYC-10]
Length = 319
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 188 LEACSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
LEA + +AK + E+E E++++VG+ E+K +++ + ++++R+ GLKVG ++
Sbjct: 34 LEALQKNEAKHSILREIEREMNSLVGMDEMKRNIKEIYAWIFVNQKRQEQGLKVG-KQAL 92
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 93 HMMFKGNPGTGKTTVARLVGKLFFEMNVLSKGHLIEAERGDLVGEYIGHTAQKTR 147
>gi|389572772|ref|ZP_10162852.1| stage V sporulation protein K [Bacillus sp. M 2-6]
gi|388427593|gb|EIL85398.1| stage V sporulation protein K [Bacillus sp. M 2-6]
Length = 319
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 188 LEACSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
LEA + +AK + E+E E++++VG+ E+K +++ + ++++R+ GLKVG ++
Sbjct: 34 LEALQKNEAKHSILREIEREMNSLVGMDEMKRNIKEIYAWIFVNQKRQEQGLKVG-KQAL 92
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 93 HMMFKGNPGTGKTTVARLVGKLFFEMNVLSKGHLIEAERGDLVGEYIGHTAQKTR 147
>gi|52080367|ref|YP_079158.1| hypothetical protein BL03237 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|404489252|ref|YP_006713358.1| stage V sporulation protein SpoVK [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423682317|ref|ZP_17657156.1| hypothetical protein MUY_02145 [Bacillus licheniformis WX-02]
gi|52003578|gb|AAU23520.1| SpoVK [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348247|gb|AAU40881.1| stage V sporulation protein SpoVK [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|383439091|gb|EID46866.1| hypothetical protein MUY_02145 [Bacillus licheniformis WX-02]
Length = 321
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Query: 175 LLWHSEEQRKRRALEACSETK-AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKA 233
+L +SE + + +A +E K + + E+E E++ +VG+ E+K +++ + ++++R+
Sbjct: 24 VLANSEAEAEYQAALQKNEAKHSILKEIEREMNTLVGMEEMKRNIKEIYAWIFVNKKREE 83
Query: 234 LGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGH 293
GLK G ++ HM F GNPGTGKT VAR++GRL Y + +L + E +R DLVGE++GH
Sbjct: 84 QGLKAG-KQALHMMFKGNPGTGKTTVARLIGRLFYEMNVLSKGHLIEAERADLVGEYIGH 142
Query: 294 TGPKTR 299
T KTR
Sbjct: 143 TAQKTR 148
>gi|443632581|ref|ZP_21116760.1| stage V sporulation protein K [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347404|gb|ELS61462.1| stage V sporulation protein K [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 321
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++GRL + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGRLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|282601140|ref|ZP_05980877.2| stage V sporulation protein K [Subdoligranulum variabile DSM 15176]
gi|282569979|gb|EFB75514.1| ATPase, AAA family [Subdoligranulum variabile DSM 15176]
Length = 686
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ + +D +E ELS I+GL E+K +R AK + +RRKA GL+V A HM F GNP
Sbjct: 418 QYRGDVDAVEAELSAIIGLTEVKNYVRDIAKNVQAQQRRKAQGLQV-ADVNMHMIFTGNP 476
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKT +ARIL + L +G L ++ EV R DLVG +VGHT P T
Sbjct: 477 GTGKTTIARILAKYLKAIGALRGGQLVEVTRADLVGRYVGHTAPLT 522
>gi|1750107|gb|AAB41076.1| SpoVK [Bacillus subtilis]
Length = 322
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 48 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 107 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 148
>gi|398310819|ref|ZP_10514293.1| stage V sporulation protein K [Bacillus mojavensis RO-H-1]
Length = 321
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++GRL + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGRLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|398304609|ref|ZP_10508195.1| stage V sporulation protein K [Bacillus vallismortis DV1-F-3]
Length = 212
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++GRL + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGRLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|170761619|ref|YP_001787678.1| stage V sporulation protein K [Clostridium botulinum A3 str. Loch
Maree]
gi|169408608|gb|ACA57019.1| stage V sporulation protein K [Clostridium botulinum A3 str. Loch
Maree]
Length = 1212
Score = 97.4 bits (241), Expect = 8e-18, Method: Composition-based stats.
Identities = 47/103 (45%), Positives = 65/103 (63%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE ELS IVGL E+K + + + + RK LGL V + HM F GNPGTGKTMV
Sbjct: 949 DLEKELSKIVGLQEVKDYISSLSARLRMQNERKKLGLTVDTTQTLHMIFKGNPGTGKTMV 1008
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR + +LY +G++ T+++ E R+ LV +VG T KTR +V
Sbjct: 1009 ARTVAEVLYNIGVIKTNKLVETDRSGLVAGYVGQTAMKTREKV 1051
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A +D+++ EL NI+GL +K + + + + R++ G K A HM F GNPGTG
Sbjct: 407 AGIDDVKKELENIIGLKSVKQYVESLEDNLKIQKMRESSGFK-AANISMHMIFTGNPGTG 465
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
KT +ARI+ + L +GIL ++ EV R DLVG++VGHT T
Sbjct: 466 KTTIARIVAKYLKALGILSQGQLREVTRADLVGQYVGHTAKLT 508
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 59/99 (59%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE LS I+GL +K +R K ++ E+R+ G+ V + +M F GNPGTGKT +
Sbjct: 678 DLEASLSEIIGLDNVKDFVRTQYKLLIAQEKRRKAGMNVDTSQALNMIFSGNPGTGKTTI 737
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
AR++ ++ +G+L + + EV R LV E+ G T KT
Sbjct: 738 ARLVAQMFKEMGLLKSGHLVEVDRGSLVAEYAGQTSKKT 776
>gi|386758473|ref|YP_006231689.1| mother cell sporulation ATPase [Bacillus sp. JS]
gi|384931755|gb|AFI28433.1| mother cell sporulation ATPase [Bacillus sp. JS]
Length = 321
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|221309621|ref|ZP_03591468.1| sporulation protein VK [Bacillus subtilis subsp. subtilis str. 168]
gi|221313944|ref|ZP_03595749.1| sporulation protein VK [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221318867|ref|ZP_03600161.1| sporulation protein VK [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323139|ref|ZP_03604433.1| sporulation protein VK [Bacillus subtilis subsp. subtilis str. SMY]
gi|321315511|ref|YP_004207798.1| stage V sporulation protein K [Bacillus subtilis BSn5]
gi|428279333|ref|YP_005561068.1| sporulation protein VK [Bacillus subtilis subsp. natto BEST195]
gi|452914799|ref|ZP_21963426.1| stage V sporulation protein K [Bacillus subtilis MB73/2]
gi|291484290|dbj|BAI85365.1| sporulation protein VK [Bacillus subtilis subsp. natto BEST195]
gi|320021785|gb|ADV96771.1| stage V sporulation protein K [Bacillus subtilis BSn5]
gi|407964726|dbj|BAM57965.1| mother cell sporulation ATPase [Bacillus subtilis BEST7003]
gi|452117219|gb|EME07614.1| stage V sporulation protein K [Bacillus subtilis MB73/2]
Length = 321
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|451819597|ref|YP_007455798.1| stage V sporulation protein K [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785576|gb|AGF56544.1| stage V sporulation protein K [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 866
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ KM EL++EL N+VGL ++K ++ + L R+K +G++ +M F GNPGT
Sbjct: 598 RDKMIELQDELDNLVGLKDVKNIVKGIVNTLELQHRKKEMGIE-SQDISLNMIFTGNPGT 656
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VARI+G++L +G+L + EV R+DLVGE+VG T PKT ++
Sbjct: 657 GKTTVARIIGKILKAIGVLKKGHMVEVTRSDLVGEYVGQTAPKTLNKI 704
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 15/127 (11%)
Query: 179 SEEQRKRRALEACSETKAKM---DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALG 235
SE+ R +LE E + D ++NE+ IV QL K+ + R LG
Sbjct: 316 SEDDRNSSSLEEALEKLEALIGLDNVKNEIKRIV-------QLIKYE-----NNRANVLG 363
Query: 236 LKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
++ + H AFLGNPGTGKT VAR++G + Y +GIL ++ EV R+ +VG ++G T
Sbjct: 364 IEKNINQCYHFAFLGNPGTGKTTVARLIGDIFYYLGILEKGQLIEVDRSTIVGRYIGETA 423
Query: 296 PKTRRRV 302
T++ +
Sbjct: 424 KLTKKAI 430
>gi|255767408|ref|NP_389624.2| mother cell sporulation ATPase [Bacillus subtilis subsp. subtilis
str. 168]
gi|384175490|ref|YP_005556875.1| stage V sporulation protein K [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|402775984|ref|YP_006629928.1| mother cell sporulation ATPase [Bacillus subtilis QB928]
gi|418033107|ref|ZP_12671584.1| mother cell sporulation ATPase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|430758831|ref|YP_007209550.1| Stage V sporulation protein K [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449094429|ref|YP_007426920.1| mother cell sporulation ATPase [Bacillus subtilis XF-1]
gi|239938849|sp|P27643.3|SP5K_BACSU RecName: Full=Stage V sporulation protein K
gi|40197|emb|CAA42049.1| spoVJ [Bacillus subtilis subsp. subtilis str. 168]
gi|225185035|emb|CAB13626.2| mother cell sporulation ATPase [Bacillus subtilis subsp. subtilis
str. 168]
gi|349594714|gb|AEP90901.1| stage V sporulation protein K [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|351469255|gb|EHA29431.1| mother cell sporulation ATPase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481165|gb|AFQ57674.1| Mother cell sporulation ATPase [Bacillus subtilis QB928]
gi|407959149|dbj|BAM52389.1| mother cell sporulation ATPase [Synechocystis sp. PCC 6803]
gi|430023351|gb|AGA23957.1| Stage V sporulation protein K [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|449028344|gb|AGE63583.1| mother cell sporulation ATPase [Bacillus subtilis XF-1]
Length = 322
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 48 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 107 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 148
>gi|350266060|ref|YP_004877367.1| stage V sporulation protein K [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349598947|gb|AEP86735.1| stage V sporulation protein K [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 322
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 48 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 107 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 148
>gi|296330958|ref|ZP_06873433.1| stage V sporulation protein K [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674476|ref|YP_003866148.1| mother cell sporulation ATPase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296151963|gb|EFG92837.1| stage V sporulation protein K [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412720|gb|ADM37839.1| mother cell sporulation ATPase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 321
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E+S +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMSALVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|452972720|gb|EME72548.1| stage V sporulation protein K [Bacillus sonorensis L12]
Length = 187
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 83/126 (65%), Gaps = 2/126 (1%)
Query: 175 LLWHSEEQRKRRALEACSETK-AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKA 233
+L +SE + + +A +E K + + E+E E++ +VG+ E+K +++ + ++++R+
Sbjct: 23 VLANSEAEAEYQAALQKNEAKHSILKEIEREMNTLVGMEEMKRNIKEIYAWIFINKKREE 82
Query: 234 LGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGH 293
GLK G ++ HM F GNPGTGKT VAR++GRL + + +L + E +R DLVGE++GH
Sbjct: 83 QGLKAG-KQALHMMFKGNPGTGKTTVARLIGRLFHEMNVLSKGHLIEAERADLVGEYIGH 141
Query: 294 TGPKTR 299
T KTR
Sbjct: 142 TAQKTR 147
>gi|308173702|ref|YP_003920407.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens DSM 7]
gi|384159276|ref|YP_005541349.1| stage V sporulation protein K [Bacillus amyloliquefaciens TA208]
gi|384164291|ref|YP_005545670.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens LL3]
gi|384168321|ref|YP_005549699.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens XH7]
gi|307606566|emb|CBI42937.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens DSM 7]
gi|328553364|gb|AEB23856.1| stage V sporulation protein K [Bacillus amyloliquefaciens TA208]
gi|328911846|gb|AEB63442.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens LL3]
gi|341827600|gb|AEK88851.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens XH7]
Length = 321
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|384265332|ref|YP_005421039.1| Stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380498685|emb|CCG49723.1| Stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 321
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|452855690|ref|YP_007497373.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452079950|emb|CCP21709.1| mother cell sporulation ATPase [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 322
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 48 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 107 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 148
>gi|385264874|ref|ZP_10042961.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
gi|385149370|gb|EIF13307.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
Length = 322
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 48 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 107 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 148
>gi|154686155|ref|YP_001421316.1| hypothetical protein RBAM_017220 [Bacillus amyloliquefaciens FZB42]
gi|375362386|ref|YP_005130425.1| Stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|394994730|ref|ZP_10387439.1| stage V sporulation protein K [Bacillus sp. 916]
gi|421731586|ref|ZP_16170709.1| stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429505296|ref|YP_007186480.1| stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451346885|ref|YP_007445516.1| stage V sporulation protein K [Bacillus amyloliquefaciens IT-45]
gi|154352006|gb|ABS74085.1| SpoVK [Bacillus amyloliquefaciens FZB42]
gi|371568380|emb|CCF05230.1| Stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|393804473|gb|EJD65883.1| stage V sporulation protein K [Bacillus sp. 916]
gi|407073799|gb|EKE46789.1| stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|429486886|gb|AFZ90810.1| stage V sporulation protein K [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449850643|gb|AGF27635.1| stage V sporulation protein K [Bacillus amyloliquefaciens IT-45]
Length = 321
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 47 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 105
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 106 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|387898329|ref|YP_006328625.1| stage V sporulation protein K [Bacillus amyloliquefaciens Y2]
gi|387172439|gb|AFJ61900.1| stage V sporulation protein K [Bacillus amyloliquefaciens Y2]
Length = 322
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 70/102 (68%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E E++ +VG+ E+K +++ + ++++R GLKVG ++ HM F GNPGTGKT
Sbjct: 48 LKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKVG-KQALHMMFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 107 TVARLIGKLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 148
>gi|311068266|ref|YP_003973189.1| stage V sporulation protein K [Bacillus atrophaeus 1942]
gi|419823747|ref|ZP_14347284.1| stage V sporulation protein K [Bacillus atrophaeus C89]
gi|310868783|gb|ADP32258.1| stage V sporulation protein K [Bacillus atrophaeus 1942]
gi|388472114|gb|EIM08900.1| stage V sporulation protein K [Bacillus atrophaeus C89]
Length = 321
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
Query: 190 ACSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHM 246
A + +AK + E+E E++ +VG+ E+K +++ + ++++R GLK G ++ HM
Sbjct: 36 AVQKNEAKHGILKEIEKEMNTLVGMEEMKRNIKEIYAWIFVNQKRAEQGLKAG-KQALHM 94
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++GRL + + +L + E +R DLVGE++GHT KTR
Sbjct: 95 MFKGNPGTGKTTVARLIGRLFFEMNVLSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|441167822|ref|ZP_20968934.1| sporulation protein K [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440615696|gb|ELQ78873.1| sporulation protein K [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 928
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPG 253
+DEL EL ++GL +K + K M + +RR+A GL PP H+ F GNPG
Sbjct: 643 DLDELLGELHQLIGLDRVKQDVASLVKLMRMVQRREAAGLAA----PPLSRHLVFAGNPG 698
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
TGKT VAR+ GR+L VG+L + E R+ LVGE+VGHTGPKT+R
Sbjct: 699 TGKTTVARLYGRILAAVGLLERGHLVEADRSALVGEYVGHTGPKTQR 745
>gi|288556893|ref|YP_003428828.1| stage V sporulation protein K [Bacillus pseudofirmus OF4]
gi|288548053|gb|ADC51936.1| stage V sporulation protein K [Bacillus pseudofirmus OF4]
Length = 317
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 77/124 (62%), Gaps = 10/124 (8%)
Query: 176 LWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALG 235
L+ SE+ R++ + +D E EL VGL+E+K +++ + +++RRK LG
Sbjct: 31 LFKSEQDRQKHEI---------LDRFEKELEEYVGLNEVKRLIKEIYAWLYINQRRKELG 81
Query: 236 LKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
L+ +++ HM F GNPGTGKT VAR++ + + +L ++ EV+R DLVGE++GHT
Sbjct: 82 LR-ASKQVLHMIFKGNPGTGKTTVARMIASFFHEMNVLAKGQLIEVERADLVGEYIGHTA 140
Query: 296 PKTR 299
KTR
Sbjct: 141 QKTR 144
>gi|322375341|ref|ZP_08049854.1| stage V sporulation protein K [Streptococcus sp. C300]
gi|321279604|gb|EFX56644.1| stage V sporulation protein K [Streptococcus sp. C300]
Length = 373
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ +DEL EL+ +VGL ++K ++ + + +RK GLKV +R HMAF+GNPGTG
Sbjct: 95 SSLDELMKELNQLVGLQKVKEEVSRLVIYQKVQSKRKESGLKV-PKRTLHMAFMGNPGTG 153
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VARI+GR+ Y +G+L TEV RTDL+ + G T K + +
Sbjct: 154 KTTVARIVGRMYYQLGLLSKGHFTEVSRTDLIAGYQGQTALKVKSVI 200
>gi|347753690|ref|YP_004861255.1| stage V sporulation protein K [Bacillus coagulans 36D1]
gi|347586208|gb|AEP02475.1| stage V sporulation protein K [Bacillus coagulans 36D1]
Length = 313
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E+EL +VG+ E+K +++ + ++++R+A GLK G ++ HM F GNPGTGKT
Sbjct: 45 LKEIEDELGTLVGMEEIKKMVKEVYAWIYINKKREAAGLKTG-KQALHMMFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 104 TVARLIGKLFHKMNVLSKGHLIEAERADLVGEYIGHTAQKTR 145
>gi|336113907|ref|YP_004568674.1| stage V sporulation protein K [Bacillus coagulans 2-6]
gi|335367337|gb|AEH53288.1| stage V sporulation protein K [Bacillus coagulans 2-6]
Length = 313
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E+EL +VG+ E+K +++ + ++++R+A GLK G ++ HM F GNPGTGKT
Sbjct: 45 LKEIEDELGTLVGMEEIKKMVKEVYAWIYINKKREAAGLKTG-KQALHMMFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 104 TVARLIGKLFHKMNVLSKGHLIEAERADLVGEYIGHTAQKTR 145
>gi|295706196|ref|YP_003599271.1| stage V sporulation protein K [Bacillus megaterium DSM 319]
gi|294803855|gb|ADF40921.1| stage V sporulation protein K [Bacillus megaterium DSM 319]
Length = 311
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+E E+S +VG+ ELK +++ + ++++R+ GLK G ++ HM F GNPGTGKT V
Sbjct: 47 EIEREMSGLVGMEELKKMIKEIYAWLYINKKREEQGLKAG-KQALHMMFKGNPGTGKTTV 105
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR+LG+L + IL + E +R DLVGE++GHT KTR V L I +
Sbjct: 106 ARLLGKLFLNMNILSKGHLIEAERADLVGEYIGHTAQKTRDLVKKALGGILFI 158
>gi|419780387|ref|ZP_14306237.1| stage V sporulation protein K family protein [Streptococcus oralis
SK100]
gi|383185546|gb|EIC78042.1| stage V sporulation protein K family protein [Streptococcus oralis
SK100]
Length = 373
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ +DEL EL+ +VGL ++K ++ + + +RK GLKV +R HMAF+GNPGTG
Sbjct: 95 SSLDELMKELNQLVGLQKVKEEVSRLVIYQKVQSKRKESGLKV-PKRTLHMAFMGNPGTG 153
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VARI+GR+ Y +G+L TEV RTDL+ + G T K + +
Sbjct: 154 KTTVARIVGRMYYQLGLLSKGHFTEVSRTDLIAGYQGQTALKVKSVI 200
>gi|293365550|ref|ZP_06612259.1| stage V sporulation protein K [Streptococcus oralis ATCC 35037]
gi|291315918|gb|EFE56362.1| stage V sporulation protein K [Streptococcus oralis ATCC 35037]
Length = 363
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ +DEL EL+ +VGL ++K ++ + + +RK GLKV +R HMAF+GNPGTG
Sbjct: 95 SSLDELMKELNQLVGLQKVKEEVSRLVIYQKVQSKRKESGLKV-PKRTLHMAFMGNPGTG 153
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VARI+GR+ Y +G+L TEV RTDL+ + G T K + +
Sbjct: 154 KTTVARIVGRMYYQLGLLSKGHFTEVSRTDLIAGYQGQTALKVKNVI 200
>gi|294500850|ref|YP_003564550.1| stage V sporulation protein K [Bacillus megaterium QM B1551]
gi|294350787|gb|ADE71116.1| stage V sporulation protein K [Bacillus megaterium QM B1551]
Length = 318
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+E E+S +VG+ ELK +++ + ++++R+ GLK G ++ HM F GNPGTGKT V
Sbjct: 54 EIEREMSGLVGMEELKKMIKEIYAWLYINKKREEQGLKAG-KQALHMMFKGNPGTGKTTV 112
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR+LG+L + IL + E +R DLVGE++GHT KTR V L I +
Sbjct: 113 ARLLGKLFLNMNILSKGHLIEAERADLVGEYIGHTAQKTRDLVKKALGGILFI 165
>gi|315613262|ref|ZP_07888171.1| stage V sporulation protein K [Streptococcus sanguinis ATCC 49296]
gi|315314497|gb|EFU62540.1| stage V sporulation protein K [Streptococcus sanguinis ATCC 49296]
Length = 373
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ +DEL EL+ +VGL ++K ++ + + +RK GLKV +R HMAF+GNPGTG
Sbjct: 95 SSLDELMKELNQLVGLQKVKEEVSRLVIYQKVQSKRKESGLKV-PKRTLHMAFMGNPGTG 153
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VARI+GR+ Y +G+L TEV RTDL+ + G T K +
Sbjct: 154 KTTVARIVGRMYYQLGLLSKGHFTEVSRTDLIAGYQGQTALKVK 197
>gi|359412736|ref|ZP_09205201.1| AAA ATPase central domain protein [Clostridium sp. DL-VIII]
gi|357171620|gb|EHI99794.1| AAA ATPase central domain protein [Clostridium sp. DL-VIII]
Length = 874
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ KM EL++EL +VGL ++K L+ + L R+K +G+ +M F GNPGT
Sbjct: 601 RDKMSELQDELDALVGLDDVKSILKGIINTLELQHRKKEMGINT-EDISLNMIFTGNPGT 659
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VARI+G++L +G+L + EV R DLVGE+VG T PKT ++
Sbjct: 660 GKTTVARIIGKILKAIGVLKKGHMVEVTRADLVGEYVGQTAPKTLNKI 707
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 90/167 (53%), Gaps = 20/167 (11%)
Query: 156 KTPLDHLSN-GPGSAKLRELLLWHSEEQRKRRALE---------ACSETKAKMDELEN-- 203
K+ +D + + G + L E H EE +K +A+ + +E K D+ +N
Sbjct: 267 KSSIDDIIDMGLKNEDLNETSENHEEEYKKDKAVNLERNIENNFSNAEIVQKDDKNKNSV 326
Query: 204 -------ELSNIVGLHELKIQLRKWAKGMLLDERR-KALGLKVGARRPPHMAFLGNPGTG 255
+L ++GL+ +K ++++ + + + R LG++ + H AFLGNPGTG
Sbjct: 327 LLQEALDKLDALIGLNTVKAEIKRIVQLIKYENNRANVLGIEKNINQSYHFAFLGNPGTG 386
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VAR++G + Y +GIL ++ EV R+++VG F+G T T++ +
Sbjct: 387 KTTVARLIGDIFYYLGILEKGQLIEVDRSEIVGRFIGETAKLTKKAI 433
>gi|307703506|ref|ZP_07640448.1| stage V sporulation protein K [Streptococcus oralis ATCC 35037]
gi|307622913|gb|EFO01908.1| stage V sporulation protein K [Streptococcus oralis ATCC 35037]
Length = 315
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ +DEL EL+ +VGL ++K ++ + + +RK GLKV +R HMAF+GNPGTG
Sbjct: 47 SSLDELMKELNQLVGLQKVKEEVSRLVIYQKVQSKRKESGLKV-PKRTLHMAFMGNPGTG 105
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VARI+GR+ Y +G+L TEV RTDL+ + G T K + +
Sbjct: 106 KTTVARIVGRMYYQLGLLSKGHFTEVSRTDLIAGYQGQTALKVKNVI 152
>gi|410722817|ref|ZP_11362070.1| AAA+ family ATPase [Clostridium sp. Maddingley MBC34-26]
gi|410603813|gb|EKQ58239.1| AAA+ family ATPase [Clostridium sp. Maddingley MBC34-26]
Length = 879
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ KM EL+ EL ++VGL E+K ++ + L R+K +G++ +M F GNPGT
Sbjct: 610 RDKMKELQEELDSLVGLEEVKNIVKGIINALELQHRKKEMGIEC-EDISLNMIFTGNPGT 668
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VARI+G++L ++G+L + EV R+DLVG++VG T PKT ++
Sbjct: 669 GKTTVARIIGKILEVIGVLKKGHMIEVTRSDLVGQYVGQTAPKTLGKI 716
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERR-KALGLKVGARRPPHMAFLGNPGTGK 256
++E N+L +++GL +K ++ + + + + R LG++ + H AFLGNPGTGK
Sbjct: 337 LEEALNKLESLIGLENVKTEIMRIVQLIKYENNRANVLGIEKNINQSYHFAFLGNPGTGK 396
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
T VAR++G + Y +GIL ++ EV R+ +VG F+G T T++ + + + I
Sbjct: 397 TTVARLIGDIFYYLGILEKGQLIEVDRSAIVGRFIGETSKLTKKAIDNAMGGI 449
>gi|365154961|ref|ZP_09351357.1| stage V sporulation protein K [Bacillus smithii 7_3_47FAA]
gi|363628886|gb|EHL79587.1| stage V sporulation protein K [Bacillus smithii 7_3_47FAA]
Length = 318
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E+ ++ + E+E E++++VGL E+K +++ + ++++R+ GLK G ++ HM F
Sbjct: 36 ESFAQEHTILKEIEEEMNSLVGLEEMKKMIKEIYAWIYINKKREMYGLKTG-KQVLHMMF 94
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT AR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 95 KGNPGTGKTTAARLIGKLFHKMNVLSKGHLIEAERADLVGEYIGHTAQKTR 145
>gi|406576556|ref|ZP_11052184.1| ATPase, AAA family protein [Streptococcus sp. GMD6S]
gi|406587587|ref|ZP_11062455.1| ATPase, AAA family protein [Streptococcus sp. GMD1S]
gi|419814872|ref|ZP_14339608.1| ATPase, AAA family protein [Streptococcus sp. GMD2S]
gi|419818175|ref|ZP_14342266.1| ATPase, AAA family protein [Streptococcus sp. GMD4S]
gi|404461304|gb|EKA07277.1| ATPase, AAA family protein [Streptococcus sp. GMD6S]
gi|404464362|gb|EKA09906.1| ATPase, AAA family protein [Streptococcus sp. GMD4S]
gi|404470739|gb|EKA15336.1| ATPase, AAA family protein [Streptococcus sp. GMD2S]
gi|404472938|gb|EKA17321.1| ATPase, AAA family protein [Streptococcus sp. GMD1S]
Length = 373
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 83/143 (58%), Gaps = 12/143 (8%)
Query: 160 DHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLR 219
D+L+ G + L E+L +E KR + + +DEL EL+ +VGL ++K ++
Sbjct: 70 DNLACYLGYSSLYEIL---GQELGKR--------SNSSLDELMKELNQLVGLQKVKEEVS 118
Query: 220 KWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVT 279
+ + +RK GLKV +R HMAF+GNPGTGKT VARI+GR+ + +G+L T
Sbjct: 119 RLVIYQKVQSKRKESGLKV-PKRTLHMAFMGNPGTGKTTVARIVGRMYFQLGLLSKGHFT 177
Query: 280 EVQRTDLVGEFVGHTGPKTRRRV 302
EV RTDL+ + G T K + +
Sbjct: 178 EVSRTDLIAGYQGQTALKVKNVI 200
>gi|118478932|ref|YP_896083.1| stage V sporulation protein K [Bacillus thuringiensis str. Al
Hakam]
gi|118418157|gb|ABK86576.1| stage V sporulation protein K [Bacillus thuringiensis str. Al
Hakam]
Length = 318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + EV+R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEVERADLVGEYIGHTAQKTR 145
>gi|418961816|ref|ZP_13513701.1| ATPase of the AAA+ class [Lactobacillus salivarius SMXD51]
gi|380343911|gb|EIA32259.1| ATPase of the AAA+ class [Lactobacillus salivarius SMXD51]
Length = 933
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ +L++++GL ++K Q+ K+ +++ +RK GL A H FLGNPGTGKT
Sbjct: 667 DDAYAKLNSLIGLEKVKQQVSKFINMSVINNKRKEQGLATSAV-SLHSLFLGNPGTGKTT 725
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+G++L+ G++ + EV RTDLV E+VG T PKTR
Sbjct: 726 VARIMGQILFQKGVIRKPELVEVSRTDLVAEYVGQTAPKTR 766
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L++++GL ++K Q++++ +++++RK GL+V H FLGNPGTGKT VARI+
Sbjct: 400 KLNSLIGLDKVKKQVKEFINLNIINQKRKEQGLQV-VNTSMHSLFLGNPGTGKTTVARII 458
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +LY ++ V EV R DLV E+VG T KTR
Sbjct: 459 GDVLYQKQVISRSDVIEVSRADLVAEYVGQTASKTR 494
>gi|149183203|ref|ZP_01861650.1| SpoVK [Bacillus sp. SG-1]
gi|148849099|gb|EDL63302.1| SpoVK [Bacillus sp. SG-1]
Length = 316
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A++ E+E EL+++VG+ ++K +++ + ++++R+ GLK G ++ HM F GNPGTG
Sbjct: 43 AELKEIEAELASLVGMEDMKKMVKEIYAWIYVNKKREEAGLKAG-KQALHMMFKGNPGTG 101
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VAR++G+L + + +L + E +R DLVGE++GHT KTR
Sbjct: 102 KTTVARLIGKLFHKMNVLTKGHLIEAERADLVGEYIGHTAQKTR 145
>gi|301299725|ref|ZP_07205975.1| stage V sporulation protein K [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300852656|gb|EFK80290.1| stage V sporulation protein K [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 871
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ +L++++GL ++K Q+ K+ +++ +RK GL A H FLGNPGTGKT
Sbjct: 605 DDAYAKLNSLIGLEKVKQQVSKFINMSVINNKRKEQGLATSAV-SLHSLFLGNPGTGKTT 663
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+G++L+ G++ + EV RTDLV E+VG T PKTR
Sbjct: 664 VARIMGQILFQKGVIRKPELVEVSRTDLVAEYVGQTAPKTR 704
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L++++GL ++K Q++++ +++++RK GL+V H FLGNPGTGKT VARI+
Sbjct: 338 KLNSLIGLDKVKKQVKEFINLNIINQKRKEQGLQV-VNTSMHSLFLGNPGTGKTTVARII 396
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +LY ++ V EV R DLV E+VG T KTR
Sbjct: 397 GDVLYQKQVISRPDVIEVSRADLVAEYVGQTASKTR 432
>gi|417809827|ref|ZP_12456508.1| ATPase of the AAA+ class [Lactobacillus salivarius GJ-24]
gi|335350751|gb|EGM52247.1| ATPase of the AAA+ class [Lactobacillus salivarius GJ-24]
Length = 933
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ +L++++GL ++K Q+ K+ +++ +RK GL A H FLGNPGTGKT
Sbjct: 667 DDAYAKLNSLIGLEKVKQQVSKFINMSVINNKRKEQGLATSAV-SLHSLFLGNPGTGKTT 725
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+G++L+ G++ + EV RTDLV E+VG T PKTR
Sbjct: 726 VARIMGQILFQKGVIRKPELVEVSRTDLVAEYVGQTAPKTR 766
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L++++GL ++K Q++++ +++++RK GL+V H FLGNPGTGKT VARI+
Sbjct: 400 KLNSLIGLDKVKKQVKEFINLNIINQKRKEQGLQV-VNTSMHSLFLGNPGTGKTTVARII 458
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +LY ++ V EV R DLV E+VG T KTR
Sbjct: 459 GDVLYQKQVISRPDVIEVSRADLVAEYVGQTASKTR 494
>gi|227892274|ref|ZP_04010079.1| ATPase of the AAA+ class [Lactobacillus salivarius ATCC 11741]
gi|227865915|gb|EEJ73336.1| ATPase of the AAA+ class [Lactobacillus salivarius ATCC 11741]
Length = 933
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ +L++++GL ++K Q+ K+ +++ +RK GL A H FLGNPGTGKT
Sbjct: 667 DDAYAKLNSLIGLEKVKQQVSKFINMSVINNKRKEQGLATSAV-SLHSLFLGNPGTGKTT 725
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+G++L+ G++ + EV RTDLV E+VG T PKTR
Sbjct: 726 VARIMGQILFQKGVIRKPELVEVSRTDLVAEYVGQTAPKTR 766
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L++++GL ++K Q++++ +++++RK GL+V H FLGNPGTGKT VARI+
Sbjct: 400 KLNSLIGLDKVKKQVKEFINLNIINQKRKEQGLQV-INTSMHSLFLGNPGTGKTTVARII 458
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +LY ++ V EV R DLV E+VG T KTR
Sbjct: 459 GDVLYQKQVISRPDVIEVSRADLVAEYVGQTASKTR 494
>gi|423511729|ref|ZP_17488260.1| stage V sporulation protein K [Bacillus cereus HuA2-1]
gi|402450747|gb|EJV82577.1| stage V sporulation protein K [Bacillus cereus HuA2-1]
Length = 318
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ E+K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDEIKKIIKEIYAWIYVNKKRQEMGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FRGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|373857383|ref|ZP_09600125.1| stage V sporulation protein K [Bacillus sp. 1NLA3E]
gi|372453033|gb|EHP26502.1| stage V sporulation protein K [Bacillus sp. 1NLA3E]
Length = 315
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A + E+E EL +VG+ E+K +++ + ++++R+ +GLK G ++ HM F GNPGTG
Sbjct: 44 AALKEIEEELGALVGMEEMKRMIKEIYAWIYVNKKREEMGLKAG-KQALHMMFKGNPGTG 102
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VAR++G+L + +L + E +R DLVGE++GHT KTR
Sbjct: 103 KTTVARLIGKLFLKMNVLAKGHLIEAERADLVGEYIGHTAQKTR 146
>gi|254393387|ref|ZP_05008531.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197707018|gb|EDY52830.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 878
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 147 DCSAKDNEGK---TPLDHLSNGP--GSAKLRELLLWHSEEQRKRRALEACSETKAKMDEL 201
DC+A+D P D P G+ R S +R +A +D+L
Sbjct: 557 DCTAQDVRTAHWPGPGDRARATPAVGTGTGRADGTGDSARDAERDGEQAGEPPVENLDDL 616
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTM 258
EL +VGL +K + K M + RR+ GL PP H+ F GNPGTGKT
Sbjct: 617 LAELGRLVGLERVKHDVSSLVKLMQMVRRREEAGLPA----PPLSRHLVFAGNPGTGKTT 672
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
VAR+ GR+L VG+L + E R+ LVGE+VGHTGPKT+R
Sbjct: 673 VARLYGRILAAVGLLERGHLIEADRSSLVGEYVGHTGPKTQR 714
>gi|294817214|ref|ZP_06775856.1| Putative sporulation protein K [Streptomyces clavuligerus ATCC
27064]
gi|326446453|ref|ZP_08221187.1| sporulation protein K [Streptomyces clavuligerus ATCC 27064]
gi|294322029|gb|EFG04164.1| Putative sporulation protein K [Streptomyces clavuligerus ATCC
27064]
Length = 900
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 147 DCSAKDNEGK---TPLDHLSNGP--GSAKLRELLLWHSEEQRKRRALEACSETKAKMDEL 201
DC+A+D P D P G+ R S +R +A +D+L
Sbjct: 579 DCTAQDVRTAHWPGPGDRARATPAVGTGTGRADGTGDSARDAERDGEQAGEPPVENLDDL 638
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTM 258
EL +VGL +K + K M + RR+ GL PP H+ F GNPGTGKT
Sbjct: 639 LAELGRLVGLERVKHDVSSLVKLMQMVRRREEAGLPA----PPLSRHLVFAGNPGTGKTT 694
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
VAR+ GR+L VG+L + E R+ LVGE+VGHTGPKT+R
Sbjct: 695 VARLYGRILAAVGLLERGHLIEADRSSLVGEYVGHTGPKTQR 736
>gi|283768582|ref|ZP_06341494.1| ATPase, AAA family [Bulleidia extructa W1219]
gi|283104974|gb|EFC06346.1| ATPase, AAA family [Bulleidia extructa W1219]
Length = 650
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ ++E SNI+GL E+K ++R + L RR+ GL V HM F+GNPGTGKT
Sbjct: 391 LSQIEESFSNIIGLEEVKEKIRSYQALFLAQRRREEQGLPVNPI-SMHMLFMGNPGTGKT 449
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M+AR+LG+ L +G+L ++ EV R+DLV ++VG T P T+
Sbjct: 450 MIARLLGQYLKNIGLLQEGQLIEVTRSDLVAKYVGQTAPLTK 491
>gi|163941392|ref|YP_001646276.1| sporulation stage V protein K [Bacillus weihenstephanensis KBAB4]
gi|229012881|ref|ZP_04170048.1| Stage V sporulation protein K [Bacillus mycoides DSM 2048]
gi|229065852|ref|ZP_04201049.1| Stage V sporulation protein K [Bacillus cereus AH603]
gi|229134502|ref|ZP_04263315.1| Stage V sporulation protein K [Bacillus cereus BDRD-ST196]
gi|229168442|ref|ZP_04296166.1| Stage V sporulation protein K [Bacillus cereus AH621]
gi|423367684|ref|ZP_17345116.1| stage V sporulation protein K [Bacillus cereus VD142]
gi|423488823|ref|ZP_17465505.1| stage V sporulation protein K [Bacillus cereus BtB2-4]
gi|423494548|ref|ZP_17471192.1| stage V sporulation protein K [Bacillus cereus CER057]
gi|423498662|ref|ZP_17475279.1| stage V sporulation protein K [Bacillus cereus CER074]
gi|423518340|ref|ZP_17494821.1| stage V sporulation protein K [Bacillus cereus HuA2-4]
gi|423592354|ref|ZP_17568385.1| stage V sporulation protein K [Bacillus cereus VD048]
gi|423598990|ref|ZP_17574990.1| stage V sporulation protein K [Bacillus cereus VD078]
gi|423661462|ref|ZP_17636631.1| stage V sporulation protein K [Bacillus cereus VDM022]
gi|423669272|ref|ZP_17644301.1| stage V sporulation protein K [Bacillus cereus VDM034]
gi|423674600|ref|ZP_17649539.1| stage V sporulation protein K [Bacillus cereus VDM062]
gi|163863589|gb|ABY44648.1| Sporulation stage V protein K [Bacillus weihenstephanensis KBAB4]
gi|228615086|gb|EEK72187.1| Stage V sporulation protein K [Bacillus cereus AH621]
gi|228649123|gb|EEL05145.1| Stage V sporulation protein K [Bacillus cereus BDRD-ST196]
gi|228715390|gb|EEL67221.1| Stage V sporulation protein K [Bacillus cereus AH603]
gi|228748425|gb|EEL98283.1| Stage V sporulation protein K [Bacillus mycoides DSM 2048]
gi|401084234|gb|EJP92484.1| stage V sporulation protein K [Bacillus cereus VD142]
gi|401152162|gb|EJQ59603.1| stage V sporulation protein K [Bacillus cereus CER057]
gi|401158744|gb|EJQ66133.1| stage V sporulation protein K [Bacillus cereus CER074]
gi|401161701|gb|EJQ69065.1| stage V sporulation protein K [Bacillus cereus HuA2-4]
gi|401229730|gb|EJR36239.1| stage V sporulation protein K [Bacillus cereus VD048]
gi|401235974|gb|EJR42440.1| stage V sporulation protein K [Bacillus cereus VD078]
gi|401299829|gb|EJS05425.1| stage V sporulation protein K [Bacillus cereus VDM034]
gi|401299835|gb|EJS05430.1| stage V sporulation protein K [Bacillus cereus VDM022]
gi|401309182|gb|EJS14547.1| stage V sporulation protein K [Bacillus cereus VDM062]
gi|402433830|gb|EJV65880.1| stage V sporulation protein K [Bacillus cereus BtB2-4]
Length = 318
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ E+K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDEIKKIIKEIYAWIYVNKKRQEMGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FRGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|435853704|ref|YP_007315023.1| AAA+ family ATPase [Halobacteroides halobius DSM 5150]
gi|433670115|gb|AGB40930.1| AAA+ family ATPase [Halobacteroides halobius DSM 5150]
Length = 324
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
EE + A E S + ++ E+ +EL+ +VGL +K +++ + + + RK GLK
Sbjct: 34 EEVEQIGAQEGVSSQQDRIKEVIDELNKLVGLDNIKELVKELKAFVKIQQVRKQRGLK-- 91
Query: 240 ARRPP---HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGP 296
P HM F GNPGTGKT VARI G+L +G+L T + EV+R DLVGE++GHT
Sbjct: 92 --SDPLVLHMIFKGNPGTGKTTVARIFGKLFKELGVLETGELQEVERADLVGEYIGHTAK 149
Query: 297 KTRRRVGHLLSEITCL 312
KTR + L I +
Sbjct: 150 KTREVIDKALGGILFI 165
>gi|228992413|ref|ZP_04152344.1| Stage V sporulation protein K [Bacillus pseudomycoides DSM 12442]
gi|228998469|ref|ZP_04158060.1| Stage V sporulation protein K [Bacillus mycoides Rock3-17]
gi|229008335|ref|ZP_04165812.1| Stage V sporulation protein K [Bacillus mycoides Rock1-4]
gi|228752903|gb|EEM02455.1| Stage V sporulation protein K [Bacillus mycoides Rock1-4]
gi|228761390|gb|EEM10345.1| Stage V sporulation protein K [Bacillus mycoides Rock3-17]
gi|228767438|gb|EEM16070.1| Stage V sporulation protein K [Bacillus pseudomycoides DSM 12442]
Length = 335
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 184 KRRALEACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
K+ + + + TK +M +E E+ +VG+ ++K +++ + ++++R+ +GLK ++
Sbjct: 47 KKSVISSETSTKHEMLQRIEEEMGKLVGMEDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQ 105
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 106 VLHMLFKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 162
>gi|403234711|ref|ZP_10913297.1| stage V sporulation protein K [Bacillus sp. 10403023]
Length = 314
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 9/147 (6%)
Query: 158 PLDHLSNGPGSAKL----RELLLWHSEEQRKRRALEACSETK-AKMDELENELSNIVGLH 212
P+ +NG + L ++L + HS + A+ +TK A + E+E E+S +VG+
Sbjct: 4 PITMKNNGQINVILNGEKKKLKVMHS---TSKEAVATKIQTKHAALKEIEEEMSALVGME 60
Query: 213 ELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGI 272
E+K +++ + ++++R+ GLK ++ HM F GNPGTGKT VAR+LG+L + +
Sbjct: 61 EMKKMIKEIYAWIYINKKREEQGLK-AEKQALHMMFKGNPGTGKTTVARLLGKLFLRMNV 119
Query: 273 LPTDRVTEVQRTDLVGEFVGHTGPKTR 299
L + E +R DLVGE++GHT KTR
Sbjct: 120 LSKGHLIEAERADLVGEYIGHTAQKTR 146
>gi|395241652|ref|ZP_10418659.1| Stage V sporulation protein K [Lactobacillus pasteurii CRBIP 24.76]
gi|394481008|emb|CCI84899.1| Stage V sporulation protein K [Lactobacillus pasteurii CRBIP 24.76]
Length = 948
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L N++GL +K Q+ ++ L++++R+ LG + + H FLGNPGTGKT VAR++
Sbjct: 688 KLQNLIGLKRVKEQIDEFISMALINKKRQELGYE-ASDYTLHSLFLGNPGTGKTTVARLM 746
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G++LY G++ D+ EV R DLVG++VGHT TR+
Sbjct: 747 GKVLYQKGVIRRDKFVEVTRADLVGKYVGHTAQLTRK 783
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+N+VGL +K Q++ + ++ RKA GLK H FLGNPGTGKT VAR+
Sbjct: 415 LNNLVGLGRVKEQIKTTTTLIKFNKIRKASGLK-NISNTLHAVFLGNPGTGKTTVARLYA 473
Query: 265 RLLYMVGILPTD--RVTEVQRTDLVGEFVGHTGPKT 298
++L+ G+LP + + E R DLVG+ +G + KT
Sbjct: 474 KILFDAGVLPGEEFKFVEAGREDLVGKVIGESAQKT 509
>gi|392956059|ref|ZP_10321589.1| stage V sporulation protein K [Bacillus macauensis ZFHKF-1]
gi|391878301|gb|EIT86891.1| stage V sporulation protein K [Bacillus macauensis ZFHKF-1]
Length = 320
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A E + ++E E++ +VG+ ELK +++ + +++ R++ GLKV ++ HM F
Sbjct: 41 AALEKHLPLKKMEQEMATLVGMEELKSFVKEVYAWIYVNKCRESQGLKV-EKQVLHMMFK 99
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VAR+LGRL + + +L + EV+R DLVGE++GHT KTR
Sbjct: 100 GNPGTGKTTVARLLGRLFHEMNVLSKGHLIEVERADLVGEYIGHTAQKTR 149
>gi|254721134|ref|ZP_05182925.1| stage V sporulation protein K [Bacillus anthracis str. A1055]
Length = 318
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG++++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMNDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|423390045|ref|ZP_17367271.1| stage V sporulation protein K [Bacillus cereus BAG1X1-3]
gi|401640423|gb|EJS58154.1| stage V sporulation protein K [Bacillus cereus BAG1X1-3]
Length = 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIFVNKKRQEVGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|410452952|ref|ZP_11306914.1| stage V sporulation protein K [Bacillus bataviensis LMG 21833]
gi|409933697|gb|EKN70617.1| stage V sporulation protein K [Bacillus bataviensis LMG 21833]
Length = 315
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A + E+E EL ++VG+ E+K +++ + ++++R+ +GLK ++ HM F GNPGTG
Sbjct: 44 AALKEIEEELGSLVGMEEMKRMIKEIYAWIYVNKKREEMGLK-ARKQALHMMFKGNPGTG 102
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VARI+G+L + +L + E +R DLVGE++GHT KTR
Sbjct: 103 KTTVARIIGKLFQKMNVLTKGHLIEAERADLVGEYIGHTAQKTR 146
>gi|433445602|ref|ZP_20409952.1| stage V sporulation protein K [Anoxybacillus flavithermus
TNO-09.006]
gi|432001016|gb|ELK21903.1| stage V sporulation protein K [Anoxybacillus flavithermus
TNO-09.006]
Length = 309
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A + E++ EL +VGL E+K +++ + +++ R+A GLK G ++ HM F GNPGTG
Sbjct: 40 AVLKEIQKELDELVGLSEVKKLIKEIYAWLYINKARQANGLK-GNKQSLHMIFKGNPGTG 98
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VARILG+L + +L E +R DLVGE++GHT KTR
Sbjct: 99 KTTVARILGKLFLEMNVLSKGHFIEAERADLVGEYIGHTANKTR 142
>gi|423418393|ref|ZP_17395482.1| stage V sporulation protein K [Bacillus cereus BAG3X2-1]
gi|401104999|gb|EJQ12966.1| stage V sporulation protein K [Bacillus cereus BAG3X2-1]
Length = 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIFVNKKRQEVGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FRGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|212639347|ref|YP_002315867.1| stage V sporulation protein K [Anoxybacillus flavithermus WK1]
gi|212560827|gb|ACJ33882.1| Stage V sporulation protein K [Anoxybacillus flavithermus WK1]
Length = 309
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A + E++ EL +VGL E+K +++ + +++ R+A GLK G ++ HM F GNPGTG
Sbjct: 40 AVLKEIQKELDELVGLSEVKKLIKEIYAWLYINKARQANGLK-GNKQSLHMIFKGNPGTG 98
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VARILG+L + +L E +R DLVGE++GHT KTR
Sbjct: 99 KTTVARILGKLFLEMNVLSKGHFIEAERADLVGEYIGHTANKTR 142
>gi|294815188|ref|ZP_06773831.1| Putative sporulation protein K [Streptomyces clavuligerus ATCC
27064]
gi|326443547|ref|ZP_08218281.1| sporulation protein K [Streptomyces clavuligerus ATCC 27064]
gi|294327787|gb|EFG09430.1| Putative sporulation protein K [Streptomyces clavuligerus ATCC
27064]
Length = 917
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 67/107 (62%), Gaps = 7/107 (6%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPG 253
+++L EL ++GL +K + K M + +RR+A GL PP H+ F GNPG
Sbjct: 632 SLEDLLGELDALIGLARVKQDVASLVKLMRMVQRREAAGLAA----PPLSRHLVFAGNPG 687
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
TGKT VAR+ GR+L VG+L + E R+ LVGE+VGHTGPKT+R
Sbjct: 688 TGKTTVARLYGRILAAVGLLERGHLVEADRSALVGEYVGHTGPKTQR 734
>gi|229018897|ref|ZP_04175741.1| Stage V sporulation protein K [Bacillus cereus AH1273]
gi|229025136|ref|ZP_04181562.1| Stage V sporulation protein K [Bacillus cereus AH1272]
gi|228736171|gb|EEL86740.1| Stage V sporulation protein K [Bacillus cereus AH1272]
gi|228742406|gb|EEL92562.1| Stage V sporulation protein K [Bacillus cereus AH1273]
Length = 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIFVNKKRQEVGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FRGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|441518293|ref|ZP_21000017.1| hypothetical protein GOHSU_28_00330 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441454827|dbj|GAC57978.1| hypothetical protein GOHSU_28_00330 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 594
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 65/98 (66%), Gaps = 1/98 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
LE EL+ VGL E+K Q+++ L + R GL+ G R H+AF G PGTGKT +A
Sbjct: 303 LEQELAEQVGLVEVKAQVQRLRSTATLAKLRAERGLRTG-ERSLHLAFAGPPGTGKTTIA 361
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
RI+ +L + +G+L TDRV EV R DLVGE++G T PKT
Sbjct: 362 RIVAKLYHGLGLLGTDRVVEVSRRDLVGEYLGSTAPKT 399
>gi|47569231|ref|ZP_00239917.1| ATPase, AAA family [Bacillus cereus G9241]
gi|47554105|gb|EAL12470.1| ATPase, AAA family [Bacillus cereus G9241]
Length = 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|423607148|ref|ZP_17583041.1| hypothetical protein IIK_03729 [Bacillus cereus VD102]
gi|401241338|gb|EJR47730.1| hypothetical protein IIK_03729 [Bacillus cereus VD102]
Length = 1659
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 64/103 (62%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L I+GL+E+K +R + + + RK LGL V HM F GNPGTGKT V
Sbjct: 1397 QLEEHLQKIIGLNEVKDFMRSLQDQIRITQTRKNLGLPVDEGSALHMIFTGNPGTGKTTV 1456
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR++ LLY +GIL +++V EV R+ LV +VG T KT+ +
Sbjct: 1457 ARVVAELLYHLGILSSNKVIEVDRSGLVAGYVGQTAIKTKEVI 1499
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 72/114 (63%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
+A + +T+ K +LE EL IVGL E+K +R K ++ + R+++G++ + + +
Sbjct: 1112 KAPDFLVDTRDKEFDLEKELETIVGLTEIKDFVRSLEKQLIAQQLRQSVGIRQKSSQNLN 1171
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M F GNPGTGKT VAR++G LL +G+L + ++ EV +++L+ + G T K R
Sbjct: 1172 MIFTGNPGTGKTTVARVVGDLLKRMGVLKSGKLVEVDKSNLISPYAGQTPEKVR 1225
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L EL I+GL ++K +R+ ++ ++RK GL + +M F GNPGTGKT V
Sbjct: 855 DLNAELDKIIGLDQVKEFMREMELQLVAQKKRKTAGLHSTMNQSLNMIFTGNPGTGKTTV 914
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLTFI 315
AR+LG ++ +GIL + EV R LVG +VG T PKT + +S + + FI
Sbjct: 915 ARLLGTMMKEMGILKSGHFVEVDRGGLVGRYVGETAPKTTDK---FMSALGGILFI 967
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Query: 191 CSETKAKMDELEN---ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+ KA + LEN E ++GL+ +K ++ + + + L + R++ G K R +
Sbjct: 569 VTRKKAGAENLENIKKEFEKVIGLNAVKERVFQLEEFLALQKIRQSRGSK-QTRLTMNFI 627
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT +AR++ + L +G L + + EV R+ LVG+++GHT PKT+
Sbjct: 628 FTGNPGTGKTTIARLVSKYLKALGYLSSGHLVEVDRSRLVGQYIGHTAPKTQ 679
>gi|387926944|ref|ZP_10129623.1| stage V sporulation protein K [Bacillus methanolicus PB1]
gi|387589088|gb|EIJ81408.1| stage V sporulation protein K [Bacillus methanolicus PB1]
Length = 317
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
+A A + E+E EL +VG+ E+K +++ + ++++R+ +GLK ++ HM F
Sbjct: 37 KAIPAEHAALKEIEEELGTLVGMEEMKRTIKEIYAWIYVNKKREEMGLKT-EKQVLHMMF 95
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
GNPGTGKT VARI+G+L + +L + E +R DLVGE++GHT KTR + L
Sbjct: 96 KGNPGTGKTTVARIIGKLFQKMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLIKKALGG 155
Query: 309 ITCL 312
I +
Sbjct: 156 ILFI 159
>gi|423611930|ref|ZP_17587791.1| stage V sporulation protein K [Bacillus cereus VD107]
gi|401246937|gb|EJR53281.1| stage V sporulation protein K [Bacillus cereus VD107]
Length = 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEMGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|42782787|ref|NP_980034.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
gi|52141780|ref|YP_085050.1| stage V sporulation protein K [Bacillus cereus E33L]
gi|228986798|ref|ZP_04146927.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229157285|ref|ZP_04285365.1| Stage V sporulation protein K [Bacillus cereus ATCC 4342]
gi|301055199|ref|YP_003793410.1| stage V sporulation protein K [Bacillus cereus biovar anthracis
str. CI]
gi|384181518|ref|YP_005567280.1| stage V sporulation protein K [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|402556168|ref|YP_006597439.1| stage V sporulation protein K [Bacillus cereus FRI-35]
gi|42738714|gb|AAS42642.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
gi|51975249|gb|AAU16799.1| stage V sporulation protein K; AAA, ATPase family associated with
various cellular activities [Bacillus cereus E33L]
gi|228626349|gb|EEK83096.1| Stage V sporulation protein K [Bacillus cereus ATCC 4342]
gi|228772970|gb|EEM21407.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|300377368|gb|ADK06272.1| stage V sporulation protein K [Bacillus cereus biovar anthracis
str. CI]
gi|324327602|gb|ADY22862.1| stage V sporulation protein K [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|401797378|gb|AFQ11237.1| stage V sporulation protein K [Bacillus cereus FRI-35]
Length = 318
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|2462107|emb|CAA71850.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
Length = 455
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L I+GL+E+K +R + + + RK LGL V HM F GNPGTGKT V
Sbjct: 340 QLEEHLQKIIGLNEVKDFMRSLQDQIRITQTRKNLGLPVDEGSALHMIFTGNPGTGKTTV 399
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR++ LLY +GIL +++V EV R+ LV +VG T KT+
Sbjct: 400 ARVVAELLYQLGILSSNKVIEVDRSGLVAGYVGQTAIKTK 439
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 72/114 (63%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
+A + +T+ K +LE EL IVGL ++K +R K ++ + R+++G++ + + +
Sbjct: 55 KASDFLVDTRDKDFDLEKELETIVGLTDIKDFVRSLEKQLIAQQLRQSVGIRQKSSQNLN 114
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M F GNPGTGKT VAR++G LL +G+L + ++ EV +++L+ + G T K R
Sbjct: 115 MIFTGNPGTGKTTVARVVGDLLKRMGVLKSGKLVEVDKSNLISPYAGQTPEKVR 168
>gi|30263713|ref|NP_846090.1| stage V sporulation protein K [Bacillus anthracis str. Ames]
gi|47529125|ref|YP_020474.1| stage V sporulation protein K [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186557|ref|YP_029809.1| stage V sporulation protein K [Bacillus anthracis str. Sterne]
gi|49478335|ref|YP_037775.1| stage V sporulation protein K [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165872806|ref|ZP_02217433.1| stage V sporulation protein K [Bacillus anthracis str. A0488]
gi|167636075|ref|ZP_02394381.1| stage V sporulation protein K [Bacillus anthracis str. A0442]
gi|167639847|ref|ZP_02398116.1| stage V sporulation protein K [Bacillus anthracis str. A0193]
gi|170689272|ref|ZP_02880467.1| stage V sporulation protein K [Bacillus anthracis str. A0465]
gi|170706832|ref|ZP_02897290.1| stage V sporulation protein K [Bacillus anthracis str. A0389]
gi|177652125|ref|ZP_02934671.1| stage V sporulation protein K [Bacillus anthracis str. A0174]
gi|190569242|ref|ZP_03022137.1| stage V sporulation protein K [Bacillus anthracis str.
Tsiankovskii-I]
gi|196034214|ref|ZP_03101624.1| stage V sporulation protein K [Bacillus cereus W]
gi|196038374|ref|ZP_03105683.1| stage V sporulation protein K [Bacillus cereus NVH0597-99]
gi|196044430|ref|ZP_03111665.1| stage V sporulation protein K [Bacillus cereus 03BB108]
gi|218904835|ref|YP_002452669.1| stage V sporulation protein K [Bacillus cereus AH820]
gi|225865684|ref|YP_002751062.1| stage V sporulation protein K [Bacillus cereus 03BB102]
gi|227813391|ref|YP_002813400.1| stage V sporulation protein K [Bacillus anthracis str. CDC 684]
gi|228916339|ref|ZP_04079909.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228928756|ref|ZP_04091791.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935007|ref|ZP_04097838.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947371|ref|ZP_04109663.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229092736|ref|ZP_04223881.1| Stage V sporulation protein K [Bacillus cereus Rock3-42]
gi|229123224|ref|ZP_04252429.1| Stage V sporulation protein K [Bacillus cereus 95/8201]
gi|229185936|ref|ZP_04313108.1| Stage V sporulation protein K [Bacillus cereus BGSC 6E1]
gi|229602105|ref|YP_002867949.1| stage V sporulation protein K [Bacillus anthracis str. A0248]
gi|254683584|ref|ZP_05147444.1| stage V sporulation protein K [Bacillus anthracis str. CNEVA-9066]
gi|254735744|ref|ZP_05193450.1| stage V sporulation protein K [Bacillus anthracis str. Western
North America USA6153]
gi|254739557|ref|ZP_05197252.1| stage V sporulation protein K [Bacillus anthracis str. Kruger B]
gi|254751126|ref|ZP_05203165.1| stage V sporulation protein K [Bacillus anthracis str. Vollum]
gi|254759443|ref|ZP_05211468.1| stage V sporulation protein K [Bacillus anthracis str. Australia
94]
gi|376267600|ref|YP_005120312.1| Stage V sporulation protein SpoVK [Bacillus cereus F837/76]
gi|386737525|ref|YP_006210706.1| Stage V sporulation protein K [Bacillus anthracis str. H9401]
gi|421509842|ref|ZP_15956744.1| stage V sporulation protein K [Bacillus anthracis str. UR-1]
gi|421637361|ref|ZP_16077959.1| stage V sporulation protein K [Bacillus anthracis str. BF1]
gi|423550543|ref|ZP_17526870.1| stage V sporulation protein K [Bacillus cereus ISP3191]
gi|30258357|gb|AAP27576.1| stage V sporulation protein K [Bacillus anthracis str. Ames]
gi|47504273|gb|AAT32949.1| stage V sporulation protein K [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180484|gb|AAT55860.1| stage V sporulation protein K [Bacillus anthracis str. Sterne]
gi|49329891|gb|AAT60537.1| stage V sporulation protein K [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164711484|gb|EDR17034.1| stage V sporulation protein K [Bacillus anthracis str. A0488]
gi|167512248|gb|EDR87625.1| stage V sporulation protein K [Bacillus anthracis str. A0193]
gi|167528587|gb|EDR91349.1| stage V sporulation protein K [Bacillus anthracis str. A0442]
gi|170128250|gb|EDS97119.1| stage V sporulation protein K [Bacillus anthracis str. A0389]
gi|170666730|gb|EDT17498.1| stage V sporulation protein K [Bacillus anthracis str. A0465]
gi|172082494|gb|EDT67559.1| stage V sporulation protein K [Bacillus anthracis str. A0174]
gi|190559616|gb|EDV13606.1| stage V sporulation protein K [Bacillus anthracis str.
Tsiankovskii-I]
gi|195993288|gb|EDX57246.1| stage V sporulation protein K [Bacillus cereus W]
gi|196024465|gb|EDX63137.1| stage V sporulation protein K [Bacillus cereus 03BB108]
gi|196030782|gb|EDX69380.1| stage V sporulation protein K [Bacillus cereus NVH0597-99]
gi|218538336|gb|ACK90734.1| stage V sporulation protein K [Bacillus cereus AH820]
gi|225789780|gb|ACO29997.1| stage V sporulation protein K [Bacillus cereus 03BB102]
gi|227004555|gb|ACP14298.1| stage V sporulation protein K [Bacillus anthracis str. CDC 684]
gi|228597540|gb|EEK55188.1| Stage V sporulation protein K [Bacillus cereus BGSC 6E1]
gi|228660239|gb|EEL15874.1| Stage V sporulation protein K [Bacillus cereus 95/8201]
gi|228690662|gb|EEL44440.1| Stage V sporulation protein K [Bacillus cereus Rock3-42]
gi|228812312|gb|EEM58641.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824907|gb|EEM70708.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830911|gb|EEM76513.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228843537|gb|EEM88615.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266513|gb|ACQ48150.1| stage V sporulation protein K [Bacillus anthracis str. A0248]
gi|364513400|gb|AEW56799.1| Stage V sporulation protein SpoVK [Bacillus cereus F837/76]
gi|384387377|gb|AFH85038.1| Stage V sporulation protein K [Bacillus anthracis str. H9401]
gi|401188927|gb|EJQ95987.1| stage V sporulation protein K [Bacillus cereus ISP3191]
gi|401820217|gb|EJT19385.1| stage V sporulation protein K [Bacillus anthracis str. UR-1]
gi|403396157|gb|EJY93395.1| stage V sporulation protein K [Bacillus anthracis str. BF1]
Length = 318
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|386714422|ref|YP_006180745.1| stage V sporulation protein K [Halobacillus halophilus DSM 2266]
gi|384073978|emb|CCG45471.1| stage V sporulation protein K [Halobacillus halophilus DSM 2266]
Length = 312
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 68/99 (68%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+++ S+IVGL +LK+++++ +L+ +RK LGLK ++ HM + GNPGTGKT +A
Sbjct: 43 IDDFFSSIVGLGDLKVRIKEIYAQVLIAHKRKELGLK-SDQQVLHMVYKGNPGTGKTTIA 101
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R++ +L Y + +L EV R+DLVGE++GHT KT+
Sbjct: 102 RMVAQLFYEIEVLEKGHFIEVDRSDLVGEYIGHTAKKTK 140
>gi|229174368|ref|ZP_04301901.1| Stage V sporulation protein K [Bacillus cereus MM3]
gi|423458115|ref|ZP_17434912.1| stage V sporulation protein K [Bacillus cereus BAG5X2-1]
gi|228609225|gb|EEK66514.1| Stage V sporulation protein K [Bacillus cereus MM3]
gi|401147570|gb|EJQ55070.1| stage V sporulation protein K [Bacillus cereus BAG5X2-1]
Length = 318
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|423395980|ref|ZP_17373181.1| stage V sporulation protein K [Bacillus cereus BAG2X1-1]
gi|423406860|ref|ZP_17384009.1| stage V sporulation protein K [Bacillus cereus BAG2X1-3]
gi|401653193|gb|EJS70743.1| stage V sporulation protein K [Bacillus cereus BAG2X1-1]
gi|401659435|gb|EJS76919.1| stage V sporulation protein K [Bacillus cereus BAG2X1-3]
Length = 318
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEMGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|15614926|ref|NP_243229.1| stage V sporulation protein K [Bacillus halodurans C-125]
gi|10174983|dbj|BAB06082.1| stage V sporulation protein K [Bacillus halodurans C-125]
Length = 315
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 12/138 (8%)
Query: 162 LSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKW 221
L N P K+ E +HSEE+R++ + ++++E EL VGL E+K +++
Sbjct: 18 LHNKPN--KMEEETFFHSEEEREKHYV---------LEKMERELKKYVGLDEVKRLIKEV 66
Query: 222 AKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEV 281
+ +++ R GL+ +++ HM F GNPGTGKT VAR++ R + +L ++ E
Sbjct: 67 YAWIYINQCRTEQGLR-ASKQALHMIFKGNPGTGKTTVARLIARFFRDMNVLSKGQLIEA 125
Query: 282 QRTDLVGEFVGHTGPKTR 299
+R DLVGE++GHT KTR
Sbjct: 126 ERADLVGEYIGHTAQKTR 143
>gi|417787457|ref|ZP_12435140.1| hypothetical protein NIAS840_00318 [Lactobacillus salivarius
NIAS840]
gi|334307634|gb|EGL98620.1| hypothetical protein NIAS840_00318 [Lactobacillus salivarius
NIAS840]
Length = 933
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ +L++++GL ++K Q+ K+ +++ +RK GL H FLGNPGTGKT
Sbjct: 667 DDAYAKLNSLIGLEKVKQQVSKFINMSVINNKRKEQGLATSVI-SLHSLFLGNPGTGKTT 725
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+G++L+ G++ + EV RTDLV E+VG T PKTR
Sbjct: 726 VARIMGQILFQKGVIRKPELVEVSRTDLVAEYVGQTAPKTR 766
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L++++GL ++K Q++++ +++++RK GL+V H FLGNPGTGKT VARI+
Sbjct: 400 KLNSLIGLDKVKKQVKEFINLNIINQKRKEQGLQV-VNTSMHSLFLGNPGTGKTTVARII 458
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +LY ++ V EV R DLV E+VG T KTR
Sbjct: 459 GDVLYQKQVISLLDVIEVSRADLVAEYVGQTASKTR 494
>gi|386846556|ref|YP_006264569.1| ATPase family gene 2 protein [Actinoplanes sp. SE50/110]
gi|359834060|gb|AEV82501.1| ATPase family gene 2 protein [Actinoplanes sp. SE50/110]
Length = 552
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLG 250
+ A++D L EL ++GL +K ++R + ++E R++ GL VGA H+ F G
Sbjct: 276 AGQDAAEVDRLLGELDAMIGLAGVKNEVRALIDEIQVNEWRRSAGLSVGAA-SHHLIFTG 334
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
PGTGKT VARI G+LL +G+LP R EV R DLVG+++GHT KT
Sbjct: 335 APGTGKTTVARIYGQLLKALGVLPNGRFREVSRRDLVGQYIGHTAEKT 382
>gi|423522467|ref|ZP_17498940.1| stage V sporulation protein K [Bacillus cereus HuA4-10]
gi|401174403|gb|EJQ81611.1| stage V sporulation protein K [Bacillus cereus HuA4-10]
Length = 318
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEVGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FRGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|415886662|ref|ZP_11548442.1| stage V sporulation protein K [Bacillus methanolicus MGA3]
gi|387587349|gb|EIJ79672.1| stage V sporulation protein K [Bacillus methanolicus MGA3]
Length = 317
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E ELS +VG+ E+K +++ + ++++R+ +GLK ++ HM F GNPGTGKT
Sbjct: 46 LKEIEEELSTLVGMEEMKRTIKEIYAWIYVNKKREEMGLKT-EKQVLHMMFKGNPGTGKT 104
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR++G+L + +L + E +R DLVGE++GHT KTR + L I +
Sbjct: 105 TVARMIGKLFQKMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLIKKALGGILFI 159
>gi|229075615|ref|ZP_04208602.1| Stage V sporulation protein K [Bacillus cereus Rock4-18]
gi|229098171|ref|ZP_04229119.1| Stage V sporulation protein K [Bacillus cereus Rock3-29]
gi|229104266|ref|ZP_04234937.1| Stage V sporulation protein K [Bacillus cereus Rock3-28]
gi|229117189|ref|ZP_04246568.1| Stage V sporulation protein K [Bacillus cereus Rock1-3]
gi|407706106|ref|YP_006829691.1| S-layer protein [Bacillus thuringiensis MC28]
gi|423378507|ref|ZP_17355791.1| stage V sporulation protein K [Bacillus cereus BAG1O-2]
gi|423441564|ref|ZP_17418470.1| stage V sporulation protein K [Bacillus cereus BAG4X2-1]
gi|423448211|ref|ZP_17425090.1| stage V sporulation protein K [Bacillus cereus BAG5O-1]
gi|423464637|ref|ZP_17441405.1| stage V sporulation protein K [Bacillus cereus BAG6O-1]
gi|423533979|ref|ZP_17510397.1| stage V sporulation protein K [Bacillus cereus HuB2-9]
gi|423540751|ref|ZP_17517142.1| stage V sporulation protein K [Bacillus cereus HuB4-10]
gi|423546987|ref|ZP_17523345.1| stage V sporulation protein K [Bacillus cereus HuB5-5]
gi|423616033|ref|ZP_17591867.1| stage V sporulation protein K [Bacillus cereus VD115]
gi|423623221|ref|ZP_17598999.1| stage V sporulation protein K [Bacillus cereus VD148]
gi|228666357|gb|EEL21820.1| Stage V sporulation protein K [Bacillus cereus Rock1-3]
gi|228679162|gb|EEL33368.1| Stage V sporulation protein K [Bacillus cereus Rock3-28]
gi|228685362|gb|EEL39292.1| Stage V sporulation protein K [Bacillus cereus Rock3-29]
gi|228707594|gb|EEL59780.1| Stage V sporulation protein K [Bacillus cereus Rock4-18]
gi|401129735|gb|EJQ37415.1| stage V sporulation protein K [Bacillus cereus BAG5O-1]
gi|401172819|gb|EJQ80035.1| stage V sporulation protein K [Bacillus cereus HuB4-10]
gi|401179676|gb|EJQ86842.1| stage V sporulation protein K [Bacillus cereus HuB5-5]
gi|401258853|gb|EJR65035.1| stage V sporulation protein K [Bacillus cereus VD148]
gi|401258998|gb|EJR65175.1| stage V sporulation protein K [Bacillus cereus VD115]
gi|401635004|gb|EJS52763.1| stage V sporulation protein K [Bacillus cereus BAG1O-2]
gi|402416822|gb|EJV49135.1| stage V sporulation protein K [Bacillus cereus BAG4X2-1]
gi|402419739|gb|EJV52015.1| stage V sporulation protein K [Bacillus cereus BAG6O-1]
gi|402463455|gb|EJV95156.1| stage V sporulation protein K [Bacillus cereus HuB2-9]
gi|407383791|gb|AFU14292.1| Stage V sporulation protein K [Bacillus thuringiensis MC28]
Length = 318
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 74/114 (64%), Gaps = 4/114 (3%)
Query: 189 EACSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
E +ET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ H
Sbjct: 33 EISNETTIKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEMGLK-SEKQVLH 91
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 92 MLFKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|319649403|ref|ZP_08003561.1| SpoVK protein [Bacillus sp. 2_A_57_CT2]
gi|317399037|gb|EFV79717.1| SpoVK protein [Bacillus sp. 2_A_57_CT2]
Length = 316
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 69/105 (65%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E+E EL +VG+ E+K +++ + ++++R+ GLK G ++ HM F GNPGTGKT
Sbjct: 46 LKEIEEELGALVGMEEMKKMIKEIYAWIYVNKKREEAGLKAG-KQALHMMFKGNPGTGKT 104
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VAR++G+L + +L + E +R DLVGE++GHT KTR V
Sbjct: 105 TVARLIGKLFQKMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLV 149
>gi|423452995|ref|ZP_17429848.1| stage V sporulation protein K [Bacillus cereus BAG5X1-1]
gi|423469918|ref|ZP_17446662.1| stage V sporulation protein K [Bacillus cereus BAG6O-2]
gi|423483300|ref|ZP_17459990.1| stage V sporulation protein K [Bacillus cereus BAG6X1-2]
gi|423558746|ref|ZP_17535048.1| stage V sporulation protein K [Bacillus cereus MC67]
gi|401138675|gb|EJQ46240.1| stage V sporulation protein K [Bacillus cereus BAG5X1-1]
gi|401142073|gb|EJQ49623.1| stage V sporulation protein K [Bacillus cereus BAG6X1-2]
gi|401190515|gb|EJQ97556.1| stage V sporulation protein K [Bacillus cereus MC67]
gi|402437997|gb|EJV70018.1| stage V sporulation protein K [Bacillus cereus BAG6O-2]
Length = 318
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
SET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SSETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEVGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FRGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|229162641|ref|ZP_04290601.1| Stage V sporulation protein K [Bacillus cereus R309803]
gi|228620904|gb|EEK77770.1| Stage V sporulation protein K [Bacillus cereus R309803]
Length = 318
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
Query: 184 KRRALEACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
K+ + + TK +M +E E+ +VG+ ++K +++ + ++++R+ +GLK ++
Sbjct: 30 KKTVISNETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEMGLK-SEKQ 88
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 89 VLHMLFKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|229582572|ref|YP_002840971.1| ankyrin [Sulfolobus islandicus Y.N.15.51]
gi|228013288|gb|ACP49049.1| Ankyrin [Sulfolobus islandicus Y.N.15.51]
Length = 359
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 11/160 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H AQ GD+ + LL + N QTPLH++A ++V+ LLE G D
Sbjct: 142 LHMAAQIGDVDVVRVLLERGADPNAKDN--NGQTPLHMAAHKGDVDVVRVLLER-GADP- 197
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
A++ G+TPLHMAA+ G + ++LL GA AK NNG TPLH++ D
Sbjct: 198 --NAKDNNGQTPLHMAAQEGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKG----DVD 251
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LLE AD +AKDN G+TPL H++ G + +LL
Sbjct: 252 VVRVLLERGADPNAKDNNGQTPL-HMAAHKGHVDVVRVLL 290
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H AQ GD+ + LL + N QTPLH++A ++V+ LLE G D
Sbjct: 208 LHMAAQEGDVDVVRVLLERGADPNAKDN--NGQTPLHMAAHKGDVDVVRVLLER-GADP- 263
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
A++ G+TPLHMAA G + ++LL GA AK NNG TPLH++
Sbjct: 264 --NAKDNNGQTPLHMAAHKGHVDVVRVLLERGADPNAKDNNGQTPLHMAAHKG----HVD 317
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDH 161
V+ LLE+ AD DN PLD+
Sbjct: 318 VVRVLLEHGADPRIADNGRHIPLDY 342
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
L+E+ N + E E YG TPLHMAA+ G + ++LL GA AK NNG TPLH++
Sbjct: 121 LIEYI-NKRAEEERLVSYGLTPLHMAAQIGDVDVVRVLLERGADPNAKDNNGQTPLHMAA 179
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
D V+ LLE AD +AKDN G+TPL H++ G + +LL
Sbjct: 180 HKG----DVDVVRVLLERGADPNAKDNNGQTPL-HMAAQEGDVDVVRVLL 224
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A GD+ + LL + N QTPLH++A ++V+ LLE G D
Sbjct: 241 LHMAAHKGDVDVVRVLLERGADPNAKDN--NGQTPLHMAAHKGHVDVVRVLLER-GADP- 296
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRS 132
A++ G+TPLHMAA G + ++LL HGA N PL + +IRS
Sbjct: 297 --NAKDNNGQTPLHMAAHKGHVDVVRVLLEHGADPRIADNGRHIPLDYAKDSAIRS 350
>gi|65321036|ref|ZP_00393995.1| COG0464: ATPases of the AAA+ class [Bacillus anthracis str. A2012]
Length = 318
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 185 RRALEACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
+ + + + TK +M +E E+ +VG+ ++K +++ + ++++R+ +GLK ++
Sbjct: 31 KTVISSXTTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQV 89
Query: 244 PHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 90 LHMLFKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|90962737|ref|YP_536652.1| ATPase [Lactobacillus salivarius UCC118]
gi|385839674|ref|YP_005877421.1| ATPase [Lactobacillus salivarius CECT 5713]
gi|90821931|gb|ABE00569.1| ATPase of the AAA+ class [Lactobacillus salivarius UCC118]
gi|300215370|gb|ADJ79783.1| ATPase of the AAA+ class [Lactobacillus salivarius CECT 5713]
Length = 925
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 66/101 (65%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ +L +++GL+++K Q+ ++ +++++RK GL A H F+GNPGTGKT
Sbjct: 655 DDAYAKLDSLIGLNKVKKQVSRFINMSVVNKKRKENGLSTSAT-SLHSLFVGNPGTGKTT 713
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARILG+LLY GI+ EV R+DLV E+VG T KTR
Sbjct: 714 VARILGQLLYQKGIVRKSSFVEVSRSDLVAEYVGQTAQKTR 754
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ +A E ++L+N++GL ++K Q+ ++ K +++++RK L H F GNP
Sbjct: 378 QIEAPKSEAMDKLNNMIGLKKVKEQVLEFIKLNVVNQKRKEQDLD-KIHTSMHSLFFGNP 436
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VARI+ +LY ++ + EV RTDLV E++G T KTR
Sbjct: 437 GTGKTTVARIIADILYQKRVISKKDIVEVSRTDLVAEYIGQTATKTR 483
>gi|288556515|ref|YP_003428450.1| stage V sporulation protein K [Bacillus pseudofirmus OF4]
gi|288547675|gb|ADC51558.1| stage V sporulation protein K [Bacillus pseudofirmus OF4]
Length = 1169
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A +++ NEL +++GL E+K + + K + L +RK GL HM F GNPGTG
Sbjct: 362 ASVEQAFNELESLIGLAEVKTFVHELTKTVELQMKRKERGLST-TPLTLHMIFSGNPGTG 420
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VAR++ +L +GIL ++ EV R DLVGE+VGHTGPKT ++
Sbjct: 421 KTTVARLISYILKGLGILSKGQLVEVARQDLVGEYVGHTGPKTMSKI 467
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
+ET+ K D+ + +L++I+GL +K + + ++ERRKAL L + + HM+F GN
Sbjct: 898 AETENK-DQAKEQLNDIIGLQNVKTFMENLFAQVAMNERRKALNLPEISGQSLHMSFTGN 956
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PGTGKT +ARI + L+ +G++ TDR+ E R+ LV +VG T KT++ +
Sbjct: 957 PGTGKTTIARIAAKRLHELGVIATDRLIETDRSGLVAGYVGQTALKTKQII 1007
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE ELS VGL +K +R K +L ++RRK G + + +M F GNPGTGKT +
Sbjct: 633 DLEEELSAYVGLDSVKNVIRTLEKQLLANKRRKEAGHTIRTEQVLNMVFSGNPGTGKTTI 692
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR L R++ +G+L + EV R++LV + G T KT+ V
Sbjct: 693 ARTLSRMMKELGVLKKGHLVEVGRSELVSGYAGQTAEKTKSVV 735
>gi|229087199|ref|ZP_04219347.1| Stage V sporulation protein K [Bacillus cereus Rock3-44]
gi|228696117|gb|EEL48954.1| Stage V sporulation protein K [Bacillus cereus Rock3-44]
Length = 776
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 76/123 (61%), Gaps = 3/123 (2%)
Query: 183 RKRRALEACSETKAKMD--ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
++++A+E E K +D ++ EL+ VG++ +K Q+ + + + RK +GL G
Sbjct: 198 QEKQAVEQVKEQKEDIDPEDIMTELNRFVGMNSIKEQIEQLMNLVEITRYRKEVGLDSGE 257
Query: 241 R-RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+P H F GNPGTGKT +AR+LG++ +G+L + EV+R DLVG ++GH+ +T+
Sbjct: 258 DIKPKHTVFYGNPGTGKTTIARLLGKVYKSLGLLEKGHIVEVKREDLVGSYIGHSEERTK 317
Query: 300 RRV 302
+ +
Sbjct: 318 KYI 320
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
H+A +GNPGTGKT VARI+ ++ +GIL EV R +LV ++ G T KT
Sbjct: 548 HIALIGNPGTGKTEVARIIAKVYEALGILSRGDCVEVDRKELVDKYRGGTEEKT 601
>gi|336176327|ref|YP_004581702.1| parallel beta-helix repeat-containing protein [Frankia symbiont of
Datisca glomerata]
gi|334857307|gb|AEH07781.1| parallel beta-helix repeat protein [Frankia symbiont of Datisca
glomerata]
Length = 559
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A + K+D+L EL +++GL +K ++R + ++E R+ GL VGA H+ F
Sbjct: 282 ATGQDAEKVDKLLAELDSMIGLGGVKAEVRALIDEIQVNEWRRDAGLAVGAV-SNHLVFT 340
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
G PGTGKT VAR+ G+LL +G+LP + EV R DLVG+++GHT KT
Sbjct: 341 GAPGTGKTTVARLYGQLLKALGVLPNGKFKEVARRDLVGQYIGHTAEKT 389
>gi|42780219|ref|NP_977466.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
gi|42736138|gb|AAS40074.1| stage V sporulation protein K [Bacillus cereus ATCC 10987]
Length = 1930
Score = 90.1 bits (222), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L I+GL+E+K +R + + + RK LGL V HM F GNPGTGKT V
Sbjct: 1668 QLEEHLQKIIGLNEVKDFMRSLQDQIRITQTRKNLGLPVDEGSALHMIFTGNPGTGKTTV 1727
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR++ LLY +GIL +++V EV R+ LV +VG T KT+
Sbjct: 1728 ARVVAELLYQLGILSSNKVIEVDRSGLVAGYVGQTAIKTK 1767
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/106 (44%), Positives = 66/106 (62%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+T+ K +LE EL IVGL ++K +R K + ++ R++ G+K + +M F GNP
Sbjct: 1119 DTRDKDFDLEKELETIVGLTDIKDFVRSLEKQLSAEQLRQSAGIKNRVSQNLNMIFTGNP 1178
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKT VAR++G LL +GIL + EV R LVG +VG T PKT
Sbjct: 1179 GTGKTTVARVVGDLLKRMGILKSGHFVEVDRGGLVGRYVGETAPKT 1224
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 69/107 (64%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+T+ K +LE EL IVGL ++K +R K ++ + R+++G++ + + +M F GNP
Sbjct: 1390 DTRDKDFDLEKELETIVGLTDIKDFVRSLEKQLIAQQLRQSVGIRQKSSQNLNMIFTGNP 1449
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VAR++G LL +G+L + ++ EV +++L+ + G T K R
Sbjct: 1450 GTGKTTVARVVGDLLKRMGVLKSGKLVEVDKSNLISPYAGQTPEKVR 1496
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 60/99 (60%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L EL I+GL ++K +R+ ++ ++RK GL + +M F GNPGTGKT V
Sbjct: 855 DLNAELDKIIGLDQVKEFMREMELQLVAQKKRKTAGLHSTMNQSLNMIFTGNPGTGKTTV 914
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
AR+LG ++ +GIL + EV R LVG +VG T PKT
Sbjct: 915 ARLLGTMMKEMGILKSGHFVEVDRGGLVGRYVGETAPKT 953
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 192 SETKAKMDELEN---ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
+ KA + LEN E ++GL+ +K ++ + + + L + R++ G K R + F
Sbjct: 570 TRKKAGAENLENIKKEFEKVIGLNAVKERVFQLEEFLALQKIRQSRGAK-QTRLTMNFIF 628
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT +AR++ + L +G L + + EV R LV ++VG TGPKT+
Sbjct: 629 TGNPGTGKTTIARLVAKYLKALGYLSSGHLVEVDRARLVAQYVGQTGPKTQ 679
>gi|114566514|ref|YP_753668.1| hypothetical protein Swol_0983 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337449|gb|ABI68297.1| SpoVK [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 299
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL E+K L + A L+ RR L LK HM F GNPGTGKT VARIL
Sbjct: 34 ELERLIGLREVKRTLAEVAAFTLIQNRRSELRLKSDPT-ALHMVFKGNPGTGKTTVARIL 92
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GR+ +GIL + EV+R DLVGE++GHT KTR
Sbjct: 93 GRVFNEIGILSKGHLLEVERADLVGEYIGHTAQKTR 128
>gi|23099102|ref|NP_692568.1| stage V sporulation protein K [Oceanobacillus iheyensis HTE831]
gi|22777330|dbj|BAC13603.1| stage V sporulation protein K [Oceanobacillus iheyensis HTE831]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
++ E S+ VGL +LK +++ +L++E+RK GLK +++ HM F GNPGTGKT VA
Sbjct: 44 VDREFSSFVGLKDLKTSIKEIYASILINEKRKESGLK-DSKQVLHMLFKGNPGTGKTTVA 102
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R L ++ Y + IL E +R DLVGE++G T KTR
Sbjct: 103 RKLAKIYYEMNILSKGHFIEAERADLVGEYIGQTAQKTR 141
>gi|423374485|ref|ZP_17351823.1| stage V sporulation protein K [Bacillus cereus AND1407]
gi|401093773|gb|EJQ01859.1| stage V sporulation protein K [Bacillus cereus AND1407]
Length = 318
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+ET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SNETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|206978288|ref|ZP_03239165.1| stage V sporulation protein K [Bacillus cereus H3081.97]
gi|217961134|ref|YP_002339702.1| stage V sporulation protein K [Bacillus cereus AH187]
gi|222097164|ref|YP_002531221.1| stage V sporulation protein k; AAA [Bacillus cereus Q1]
gi|229197817|ref|ZP_04324534.1| Stage V sporulation protein K [Bacillus cereus m1293]
gi|375285635|ref|YP_005106074.1| stage V sporulation protein K [Bacillus cereus NC7401]
gi|423353416|ref|ZP_17331043.1| stage V sporulation protein K [Bacillus cereus IS075]
gi|423567391|ref|ZP_17543638.1| stage V sporulation protein K [Bacillus cereus MSX-A12]
gi|423574695|ref|ZP_17550814.1| stage V sporulation protein K [Bacillus cereus MSX-D12]
gi|423604666|ref|ZP_17580559.1| stage V sporulation protein K [Bacillus cereus VD102]
gi|206743492|gb|EDZ54922.1| stage V sporulation protein K [Bacillus cereus H3081.97]
gi|217068038|gb|ACJ82288.1| stage V sporulation protein K [Bacillus cereus AH187]
gi|221241222|gb|ACM13932.1| stage V sporulation protein K; AAA [Bacillus cereus Q1]
gi|228585667|gb|EEK43768.1| Stage V sporulation protein K [Bacillus cereus m1293]
gi|358354162|dbj|BAL19334.1| stage V sporulation protein K [Bacillus cereus NC7401]
gi|401089229|gb|EJP97400.1| stage V sporulation protein K [Bacillus cereus IS075]
gi|401210965|gb|EJR17714.1| stage V sporulation protein K [Bacillus cereus MSX-D12]
gi|401214479|gb|EJR21209.1| stage V sporulation protein K [Bacillus cereus MSX-A12]
gi|401243814|gb|EJR50178.1| stage V sporulation protein K [Bacillus cereus VD102]
Length = 318
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+ET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SNETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|429198565|ref|ZP_19190383.1| ATPase, AAA family [Streptomyces ipomoeae 91-03]
gi|428665726|gb|EKX64931.1| ATPase, AAA family [Streptomyces ipomoeae 91-03]
Length = 896
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 9/107 (8%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP----HMAFLGNPG 253
+D+L EL + GL +K + K M + RR+ +GL PP H+ F GNPG
Sbjct: 630 LDDLLAELRGLAGLERVKHDVSSLVKLMQMVRRREEMGLA-----PPPLSRHLVFAGNPG 684
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
TGKT VAR+ GR+L VG+L + E R+ LVGE+VGHTGPKT R
Sbjct: 685 TGKTTVARLYGRILAAVGLLERGHLVEADRSALVGEYVGHTGPKTTR 731
>gi|315613302|ref|ZP_07888211.1| ATPase of the AAA family protein [Streptococcus sanguinis ATCC
49296]
gi|315314537|gb|EFU62580.1| ATPase of the AAA family protein [Streptococcus sanguinis ATCC
49296]
Length = 361
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
DEL +EL++++GL +K ++ + + R+ +GLK R HMAFLGNPGTGKT
Sbjct: 96 FDELSDELNSLIGLENVKKEIENLVAFNKVQQSREKIGLK-KTNRTMHMAFLGNPGTGKT 154
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+G + +GIL E RTDL+ E+ G T K +R +
Sbjct: 155 TVARIVGNMYRSLGILSKGHFIEASRTDLIAEYQGQTASKVKRLI 199
>gi|288916463|ref|ZP_06410841.1| AAA ATPase central domain protein [Frankia sp. EUN1f]
gi|288352234|gb|EFC86433.1| AAA ATPase central domain protein [Frankia sp. EUN1f]
Length = 296
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 72/125 (57%), Gaps = 11/125 (8%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---H 245
E +E +++L EL+ +VGL +K + K M RR+ GL PP H
Sbjct: 18 EGEAEVTESLEDLLAELAGLVGLERVKKDVGAQVKLMQTVRRRQEAGLPA----PPLSRH 73
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRR 301
+ F GNPGTGKT VAR+ GRLL +GIL + E R+D+VGE+VGHT PKT RR
Sbjct: 74 LVFAGNPGTGKTTVARLYGRLLAALGILEHGHLVETDRSDMVGEYVGHTAPKTQAVFRRA 133
Query: 302 VGHLL 306
+G +L
Sbjct: 134 LGGVL 138
>gi|6016881|dbj|BAA31535.2| unnamed protein product [Bacillus sp.]
Length = 263
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 63/102 (61%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+E L++I GL E+K +R + + +RK LGL V + HM F GNPGTGKTM+A
Sbjct: 1 METALASIAGLEEVKNHVRSLHALLRIQAKRKKLGLPVDENKTLHMIFTGNPGTGKTMMA 60
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
RI+ +LY +GI+ +++ E R+ LV FVG T KTR +
Sbjct: 61 RIIANVLYSLGIIKANKLVETDRSGLVAGFVGQTSIKTREVI 102
>gi|212723508|ref|NP_001132342.1| uncharacterized protein LOC100193785 [Zea mays]
gi|194694130|gb|ACF81149.1| unknown [Zea mays]
gi|413925924|gb|AFW65856.1| hypothetical protein ZEAMMB73_374157 [Zea mays]
Length = 227
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/45 (88%), Positives = 45/45 (100%)
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
MVARILG+LL+MVGILPTD+VTEVQRTDLVGEFVGHTGPKTRR++
Sbjct: 1 MVARILGKLLHMVGILPTDKVTEVQRTDLVGEFVGHTGPKTRRKI 45
>gi|423401477|ref|ZP_17378650.1| stage V sporulation protein K [Bacillus cereus BAG2X1-2]
gi|423477817|ref|ZP_17454532.1| stage V sporulation protein K [Bacillus cereus BAG6X1-1]
gi|401652855|gb|EJS70406.1| stage V sporulation protein K [Bacillus cereus BAG2X1-2]
gi|402429452|gb|EJV61538.1| stage V sporulation protein K [Bacillus cereus BAG6X1-1]
Length = 318
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+ET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SNETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|229031332|ref|ZP_04187337.1| Stage V sporulation protein K [Bacillus cereus AH1271]
gi|228729987|gb|EEL80962.1| Stage V sporulation protein K [Bacillus cereus AH1271]
Length = 318
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+ET K + +E E+ +VG+ ++K +++ + ++++R+ +GLK ++ HM
Sbjct: 35 SNETTTKHEMLQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEIGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|384135197|ref|YP_005517911.1| AAA ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|339289282|gb|AEJ43392.1| AAA ATPase central domain protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 329
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
K +M EL EL ++VGL E+K +R+ + + RK LK A HM F GNPGT
Sbjct: 56 KRRMHELLRELDDLVGLDEVKRVVREIFALVYVQRLRKEHRLKADAT-VLHMIFYGNPGT 114
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
GKT VARIL R+ + G+L + EV+R DLVGE++GHT KTR ++ L + +
Sbjct: 115 GKTTVARILARMFHECGLLEKGHLVEVERADLVGEYIGHTAQKTREQIQKALGGVLFI 172
>gi|322376674|ref|ZP_08051167.1| stage V sporulation protein K [Streptococcus sp. M334]
gi|321282481|gb|EFX59488.1| stage V sporulation protein K [Streptococcus sp. M334]
Length = 373
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E + K+ +D+L EL+ +VGL ++K ++ + + +RK GL + +R HMAF
Sbjct: 88 ELSHQKKSSLDDLLVELNQLVGLEKVKKEVSRLIIYQKVQSKRKESGLNI-PKRTLHMAF 146
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+GNPGTGKT VARI+GR+ Y +G+L EV RTDL+ + G T K + +
Sbjct: 147 MGNPGTGKTTVARIIGRMYYQLGLLSKGHFLEVSRTDLIAGYQGQTALKVKNVI 200
>gi|147677681|ref|YP_001211896.1| ATPase of the AAA+ class [Pelotomaculum thermopropionicum SI]
gi|146273778|dbj|BAF59527.1| ATPase of the AAA+ class [Pelotomaculum thermopropionicum SI]
Length = 317
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ EL+++VGL +K + + + + ++R+ L V HM F GNPGTGKT V
Sbjct: 50 EIMMELNSLVGLQSVKKLIEEIYAFVEIQKKRQKEKLAV-ENLVLHMIFKGNPGTGKTTV 108
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
ARILGRL VG+LP + EV+R DLVGEF+GHT KTR ++ L I +
Sbjct: 109 ARILGRLFKEVGVLPRGHLVEVERADLVGEFIGHTAQKTREQIKQALGGILFI 161
>gi|226312948|ref|YP_002772842.1| stage V sporulation protein K [Brevibacillus brevis NBRC 100599]
gi|226095896|dbj|BAH44338.1| stage V sporulation protein K [Brevibacillus brevis NBRC 100599]
Length = 305
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +++GLHE K + + + +++ R+ GLK+ ++ HM F GNPGTGKT +AR+
Sbjct: 45 ELESLIGLHEAKKTIYEIYALIKMNKARERHGLKI-EKQVFHMVFKGNPGTGKTTIARLF 103
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
G++ +G+L +TEV+R DLVGEF+GHT KTR V
Sbjct: 104 GKIFKEMGVLTKGHLTEVERADLVGEFIGHTAQKTRDLV 142
>gi|311030169|ref|ZP_07708259.1| stage V sporulation protein K [Bacillus sp. m3-13]
Length = 310
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A + E+E E+ +VGL E+K +++ + ++++R+ GLK R+ HM F GNPGTG
Sbjct: 41 AILQEIEREMGELVGLQEMKKVVKEIYAWIYVNKKREEFGLKT-ERQVLHMMFKGNPGTG 99
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
KT VAR++G+L + +L + E +R DLVGE++GHT KTR V L I
Sbjct: 100 KTTVARLIGKLFCDMNVLSKGHLIEAERADLVGEYIGHTAQKTRDLVKKALGGI 153
>gi|398814303|ref|ZP_10572984.1| AAA+ family ATPase [Brevibacillus sp. BC25]
gi|398036572|gb|EJL29781.1| AAA+ family ATPase [Brevibacillus sp. BC25]
Length = 316
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +++GLHE K + + + +++ R+ GLK+ ++ HM F GNPGTGKT +AR+
Sbjct: 56 ELESLIGLHEAKRTIYEIYALIKMNKARERHGLKI-EKQVFHMVFKGNPGTGKTTIARLF 114
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
G++ +G+L +TEV+R DLVGEF+GHT KTR V
Sbjct: 115 GKIFKEMGVLTKGHLTEVERADLVGEFIGHTAQKTRDLV 153
>gi|357039451|ref|ZP_09101245.1| AAA ATPase central domain protein [Desulfotomaculum gibsoniae DSM
7213]
gi|355358350|gb|EHG06118.1| AAA ATPase central domain protein [Desulfotomaculum gibsoniae DSM
7213]
Length = 316
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLG 250
S++ K+ E+ EL +VGL +K + + + + +RR L ++ HM F G
Sbjct: 38 ASDSDNKVHEIRKELDALVGLDNVKKHINEIYAFVEIQKRRSREKLHTESQ-VLHMVFKG 96
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEIT 310
NPGTGKT VARILG+L GILP + EV+R DLVGE++GHT K+R ++ L I
Sbjct: 97 NPGTGKTTVARILGKLFREAGILPKGHLVEVERADLVGEYIGHTAQKSRDQIKKSLGGIL 156
Query: 311 CL 312
+
Sbjct: 157 FI 158
>gi|384045300|ref|YP_005493317.1| stage V sporulation protein K; AAA, ATPase family associated with
various cellular activities [Bacillus megaterium
WSH-002]
gi|345442991|gb|AEN88008.1| Stage V sporulation protein K; AAA, ATPase family associated with
various cellular activities [Bacillus megaterium
WSH-002]
Length = 260
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 1/108 (0%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
+S +VG+ ELK +++ + ++++R+ GLK G ++ HM F GNPGTGKT VAR+LG
Sbjct: 1 MSGLVGMEELKKMIKEIYAWLYINKKREEQGLKAG-KQALHMMFKGNPGTGKTTVARLLG 59
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
+L + IL + E +R DLVGE++GHT KTR V L I +
Sbjct: 60 KLFLNMNILSKGHLIEAERADLVGEYIGHTAQKTRDLVKKALGGILFI 107
>gi|334135581|ref|ZP_08509064.1| stage V sporulation protein K [Paenibacillus sp. HGF7]
gi|333606776|gb|EGL18107.1| stage V sporulation protein K [Paenibacillus sp. HGF7]
Length = 1222
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+ENEL+ IVGL ++K+ +R K +++D RRK G+ V + +M F GNPGTGKT +A
Sbjct: 682 IENELAGIVGLEKVKLFVRTLEKQLIVDRRRKEAGIHVDTGQTLNMIFSGNPGTGKTTMA 741
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R++ +L +G L + EV R+DLV E+VG T KT+
Sbjct: 742 RLVAGMLRSMGYLKKGHLVEVDRSDLVAEYVGQTANKTK 780
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D++ EL+ + GL +K + + + + +++ R G + HM F GNPGTGKT
Sbjct: 407 IDDVLEELNALTGLEPVKKFVYELMETVQVNKLRAREG-EGSVAMSLHMVFTGNPGTGKT 465
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR++GR+L +G+LP ++ EV R DLVG++VG T PKT +V L + +
Sbjct: 466 TVARLVGRILKALGLLPQGQLIEVTRQDLVGQYVGSTAPKTMAQVNEALGGVLFI 520
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +VGL +K ++ + + + +RR+ +GL + + HM F GNPGTGKT +ARIL
Sbjct: 964 LDAVVGLSSVKEFVKSLSAQIEVAKRRQEMGLPKASAQALHMVFKGNPGTGKTTIARILA 1023
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ +G++ D + E R+ LV +VG T KT+ + L I
Sbjct: 1024 QRFKELGVIKADTLVETDRSGLVAGYVGQTALKTKEVIERALGGI 1068
>gi|111224635|ref|YP_715429.1| sporulation protein K [Frankia alni ACN14a]
gi|111152167|emb|CAJ63898.1| putative sporulation protein K (stage V; partial match). Contains
an ATPase domain [Frankia alni ACN14a]
Length = 996
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNP 252
A + +L EL+ +VGL +K + K M RR+ GL PP H+ F GNP
Sbjct: 725 ASLADLLGELAGLVGLERVKQDVGAQVKLMRTVRRRQEAGLPA----PPLSRHLVFAGNP 780
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRRVGHLL 306
GTGKT VAR+ GRLL +GIL + E R+D+VGE+VGHT PKT RR +G +L
Sbjct: 781 GTGKTTVARLYGRLLAALGILERGHLVEADRSDMVGEYVGHTAPKTQAIFRRALGGVL 838
>gi|379012438|ref|YP_005270250.1| sporulation protein [Acetobacterium woodii DSM 1030]
gi|375303227|gb|AFA49361.1| sporulation protein [Acetobacterium woodii DSM 1030]
Length = 1208
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 67/118 (56%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S T A +LE LS++VGL +K +R + + RK +GL V + HM F GN
Sbjct: 937 SNTSANTFDLEKSLSSVVGLTNVKNYVRSLYARLRMQSERKKIGLPVDNTQTLHMIFKGN 996
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
PGTGKTM+AR + +LY +G++ T+++ E R LV +VG T KT +V + +
Sbjct: 997 PGTGKTMIARTVVEVLYNIGVIKTNKLVETDRAGLVAGYVGQTALKTTEKVSEAMDGV 1054
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ + DE++ EL +VGL ++K + + + + R+ G K A HM F GNP
Sbjct: 399 KNTSNFDEIKKELLEVVGLTKVKEYVLDLENNLKVQQMREDAGHKT-ASLSMHMIFTGNP 457
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKTM+ARI+ + L ++G+L T + EV R DLVG+++GHT +T
Sbjct: 458 GTGKTMIARIIAKYLKIIGVLSTGHLREVSRADLVGQYLGHTAKQT 503
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L I+GL +K +R + ++ +E+R+ G+ V + + +M F GNPGTGKT V
Sbjct: 673 DLEKSLGTIIGLENVKDFVRTQYRLLIANEKRRNAGIVVDSTQSLNMIFTGNPGTGKTTV 732
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
AR++ + +G+L + E +R LV E+VG T KT
Sbjct: 733 ARVVASMFKEMGLLKKGHLIETERGGLVAEYVGQTAQKT 771
>gi|335038597|ref|ZP_08531825.1| stage V sporulation protein K [Caldalkalibacillus thermarum TA2.A1]
gi|334181510|gb|EGL84047.1| stage V sporulation protein K [Caldalkalibacillus thermarum TA2.A1]
Length = 318
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
Query: 178 HSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
H + +RA + S ++ +L +VGL +K + + + ++++RK LGLK
Sbjct: 25 HQPQTAHQRAFISDSPKHMILERAMKQLERLVGLENVKDFIYEIYAWLYINQKRKELGLK 84
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
++ HM F GNPGTGKT VARIL + +G+L + EV+R DLVGE++GHT K
Sbjct: 85 TTSQ-SLHMIFKGNPGTGKTTVARILSEMFRDIGVLSKGHLVEVERGDLVGEYIGHTAQK 143
Query: 298 TRRRVGHLLSEITCL 312
TR V L I +
Sbjct: 144 TRETVNKALGGILFI 158
>gi|167630626|ref|YP_001681125.1| stage v sporulation protein k [Heliobacterium modesticaldum Ice1]
gi|167593366|gb|ABZ85114.1| stage v sporulation protein k [Heliobacterium modesticaldum Ice1]
Length = 335
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ K+ E+ +E+S +VGL E+K + + + + + R GL + HM F GNP
Sbjct: 36 QATGKVQEILDEISGLVGLQEIKALIHELRSFVEIRQLRDKEGL-INEPMALHMIFKGNP 94
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
G+GKT VAR++GRL +G+LP + EV+R DLVGE++GHT K R +V
Sbjct: 95 GSGKTTVARLIGRLFKELGVLPKGHIVEVERADLVGEYIGHTAVKAREQV 144
>gi|56963946|ref|YP_175677.1| spore formation protein K [Bacillus clausii KSM-K16]
gi|56910189|dbj|BAD64716.1| spore formation protein K [Bacillus clausii KSM-K16]
Length = 313
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ + E +LS +GL E+K +++ + ++ERRK GLK ++ HM F GNPGTGKT
Sbjct: 42 LTKFEQKLSAYIGLDEIKALIQELYAWIYVNERRKERGLK-ATKQVLHMIFKGNPGTGKT 100
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+ L+ + +L + E++R DLVGE++GHT KTR
Sbjct: 101 TVARIVASFLHEMNVLSKGHLLEMERADLVGEYIGHTAQKTR 142
>gi|423455433|ref|ZP_17432286.1| hypothetical protein IEE_04177 [Bacillus cereus BAG5X1-1]
gi|401134732|gb|EJQ42345.1| hypothetical protein IEE_04177 [Bacillus cereus BAG5X1-1]
Length = 1928
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L I+GL+E+K +R + + + RK+LGL V HM F GNPGTGKT V
Sbjct: 1666 QLEEHLQAIIGLNEVKDFMRSLQDQIRIAQTRKSLGLPVEEGSSLHMIFTGNPGTGKTTV 1725
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
ARI+ LLY +GIL +++ EV R+ LV +VG T KT+
Sbjct: 1726 ARIVANLLYHLGILSSNKTIEVDRSGLVAGYVGQTAIKTK 1765
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 77/131 (58%)
Query: 168 SAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLL 227
SA++ E S E +A + +T+ K +LE EL I+GL ++K +R K +
Sbjct: 1092 SARISEDEYADSTELITFKASDFLIDTRDKEFDLEKELEKIIGLTDIKDFVRSLEKQLSA 1151
Query: 228 DERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLV 287
++ R++ G+K + +M F GNPGTGKT VAR++G LL +GIL + EV R LV
Sbjct: 1152 EQLRQSAGIKNRFSQNLNMIFTGNPGTGKTTVARVVGDLLKRMGILKSGHFVEVDRGGLV 1211
Query: 288 GEFVGHTGPKT 298
G+++G T PKT
Sbjct: 1212 GQYLGETAPKT 1222
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 62/99 (62%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L EL I+GL ++K +R ++ ++RK GL+ A +M F GNPGTGKT V
Sbjct: 855 DLNAELDKIIGLDQVKEFMRGMKLQLVAQKKRKNAGLQSPAGPSLNMIFTGNPGTGKTTV 914
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
AR+LG ++ +GIL + EV R LVG+++GHT PKT
Sbjct: 915 ARVLGTMMKEMGILKSGHFVEVDRGGLVGQYLGHTAPKT 953
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 71/114 (62%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
+A + ++T+ K +LE EL IVGL ++K +R K ++ + R+++G+K + +
Sbjct: 1381 KAPDFLTDTRDKEFDLEKELEKIVGLTDIKNFVRSLEKQLIAQQLRQSVGIKNKFSQNLN 1440
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M F GNPGTGKT VAR++G LL +G+L + ++ EV + +L+ + G T K +
Sbjct: 1441 MIFTGNPGTGKTTVARVVGDLLKRMGLLKSGKLVEVDKGNLIAPYAGQTPEKVK 1494
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 192 SETKAKMDELEN---ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
+ KA + LEN + ++GL+ +K ++ + + + L + R++ G K R + F
Sbjct: 570 TRKKAGAENLENIKGKFEKVIGLNTVKERIFQLEEFLALQKIRQSRGSK-QTRLTMNFIF 628
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT +AR++ L VG L + + EV R+ LVG+++G T PKT+
Sbjct: 629 TGNPGTGKTTIARLVAEYLKAVGYLSSGHLVEVDRSRLVGQYIGDTAPKTQ 679
>gi|284028731|ref|YP_003378662.1| AAA ATPase central domain-containing protein [Kribbella flavida DSM
17836]
gi|283808024|gb|ADB29863.1| AAA ATPase central domain protein [Kribbella flavida DSM 17836]
Length = 545
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
+E+ +++L EL +VGL +K ++ + ++E R+A GL +GA H+ F G
Sbjct: 269 AESGGPLEDLLGELDEMVGLPGVKAEVHALVDEIQVNEWRRAAGLSIGAV-SHHLIFAGA 327
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
PGTGKT VAR+ G+LL +G+LP TEV R DLVG++VGHT KT
Sbjct: 328 PGTGKTTVARLYGKLLKALGVLPHGEFTEVSRRDLVGQYVGHTAEKT 374
>gi|419782257|ref|ZP_14308066.1| ATPase, AAA family [Streptococcus oralis SK610]
gi|383183361|gb|EIC75898.1| ATPase, AAA family [Streptococcus oralis SK610]
Length = 361
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
DEL +EL++++GL +K ++ + + R+ +GLK R HMAFLGNPGTGKT
Sbjct: 96 FDELSDELNSLIGLENVKKEIEDLVIFNKVQKNREKIGLK-KTNRTMHMAFLGNPGTGKT 154
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+G + +GIL E RTDL+ E+ G T K +R +
Sbjct: 155 TVARIVGNMYRSLGILSKGHFIEATRTDLIAEYQGQTASKVKRLI 199
>gi|254479231|ref|ZP_05092576.1| stage V sporulation protein K [Carboxydibrachium pacificum DSM
12653]
gi|214034832|gb|EEB75561.1| stage V sporulation protein K [Carboxydibrachium pacificum DSM
12653]
Length = 302
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
E+ + LE E K + + L EL++++GLH++K + + L +RK GL A
Sbjct: 22 EKEISKELEQVDEKKLQEEAL-RELNSLIGLHKVKEIIYEIYAFSQLQMKRKKEGL---A 77
Query: 241 RRPP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
P HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT +
Sbjct: 78 TDPIVLHMIFKGNPGTGKTTVARILGKLLKGIGVLEKGHVVEVERADLVGEYIGHTAHRV 137
Query: 299 RRRVGHLLSEI 309
R V L I
Sbjct: 138 RENVKKALGGI 148
>gi|385678049|ref|ZP_10051977.1| parallel beta-helix repeat-containing protein [Amycolatopsis sp.
ATCC 39116]
Length = 560
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D+L EL ++GL +K ++R + ++E R++ GL VG H+ F G PGTGKT
Sbjct: 288 VDKLLGELDGMIGLASVKAEVRGLIDEIQVNEWRRSEGLSVGTV-SNHLVFAGAPGTGKT 346
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
VARI G+LL +GILP R EV R DLVG+++GHT K
Sbjct: 347 TVARIYGQLLKALGILPNGRFKEVSRRDLVGQYIGHTAEK 386
>gi|20807813|ref|NP_622984.1| ATPase AAA+ [Thermoanaerobacter tengcongensis MB4]
gi|20516372|gb|AAM24588.1| ATPases of the AAA+ class [Thermoanaerobacter tengcongensis MB4]
Length = 298
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 6/134 (4%)
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
E+ + LE E K + + L EL++++GLH++K + + L +RK GL A
Sbjct: 18 EKEISKELEQVDEKKLQEEAL-RELNSLIGLHKVKEIIYEIYAFSQLQMKRKKEGL---A 73
Query: 241 RRPP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
P HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT +
Sbjct: 74 TDPIVLHMIFKGNPGTGKTTVARILGKLLKGIGVLEKGHVVEVERADLVGEYIGHTAHRV 133
Query: 299 RRRVGHLLSEITCL 312
R V L I +
Sbjct: 134 RENVKKALGGILFV 147
>gi|451336536|ref|ZP_21907092.1| Stage V sporulation protein K [Amycolatopsis azurea DSM 43854]
gi|449420848|gb|EMD26304.1| Stage V sporulation protein K [Amycolatopsis azurea DSM 43854]
Length = 549
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 1/103 (0%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ +DE+ EL ++GL E+K ++R + ++E R+ GL VGA H+ F G PGTG
Sbjct: 277 SALDEMLAELDAMIGLPEVKEEVRALVDELQVNEWRRRAGLPVGAAGH-HLIFAGAPGTG 335
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
KT VARI G+LL +G+LP EV R DLVG+++GHT KT
Sbjct: 336 KTTVARIYGKLLKALGVLPVGEFREVSRRDLVGQYIGHTAEKT 378
>gi|417849238|ref|ZP_12495162.1| ATPase, AAA family [Streptococcus mitis SK1080]
gi|339456705|gb|EGP69290.1| ATPase, AAA family [Streptococcus mitis SK1080]
Length = 304
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+EL N+L +++GL +K +++ + + R+ +GLK R HMAFLGNPGTGKT
Sbjct: 96 FEELANDLKSLIGLENVKKEIKDLVAFNKVQQSREKIGLK-KTNRTMHMAFLGNPGTGKT 154
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+G + +GIL E RTDL+ E+ G T K +R +
Sbjct: 155 TVARIVGNMYRSLGILSKGHFIEASRTDLIAEYQGQTASKVKRLI 199
>gi|225174624|ref|ZP_03728622.1| AAA ATPase central domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225169751|gb|EEG78547.1| AAA ATPase central domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 332
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 14/133 (10%)
Query: 183 RKRRALEACSETKAKMDE-------------LENELSNIVGLHELKIQLRKWAKGMLLDE 229
R ALE ++T+ +DE L NEL+ +VGL +K +R+ + +
Sbjct: 27 RTEDALEVVAKTRQAVDEPHDVMETPPNLQQLINELNRLVGLGNVKELVREIRAYVEISR 86
Query: 230 RRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGE 289
RR++ LK HM F GNPGTGKT VARILG++L + +LP + EV+R DLVGE
Sbjct: 87 RRQSFQLKNDGL-VLHMVFKGNPGTGKTTVARILGKMLAELQVLPKGHLVEVERADLVGE 145
Query: 290 FVGHTGPKTRRRV 302
F+G T +TR ++
Sbjct: 146 FIGQTAQRTREQL 158
>gi|28373837|pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 77/128 (60%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH++A E+VK LLE ++ A++ G TPLH+AA+NG E KLLL G
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK NG TPLHL+ R+ VK LLE AD +AKD G+TPL HL+ G
Sbjct: 59 ADVNAKDKNGRTPLHLAA----RNGHLEVVKLLLEAGADVNAKDKNGRTPL-HLAARNGH 113
Query: 169 AKLRELLL 176
++ +LLL
Sbjct: 114 LEVVKLLL 121
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G TPLH+AA+NG E KLLL GA + AK NG TPLHL+ R+ VK LLE
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA----RNGHLEVVKLLLEA 57
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AD +AKD G+TPL HL+ G ++ +LLL
Sbjct: 58 GADVNAKDKNGRTPL-HLAARNGHLEVVKLLL 88
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+D+ R+ +H A++G L +LL E + +N ++ +TPLH++A E+V
Sbjct: 31 KDKNGRT----PLHLAARNGHL-EVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVV 84
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
K LLE ++ A++ G TPLH+AA+NG E KLLL GA+
Sbjct: 85 KLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126
>gi|304439621|ref|ZP_07399525.1| stage V sporulation protein K [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371933|gb|EFM25535.1| stage V sporulation protein K [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 730
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGAR--RPPHMAFLGNPGTGKTMVAR 261
EL++++GL +K Q+ +L D K + K G + R HMAF GNPGTGKT VA+
Sbjct: 470 ELNSLIGLSSVKKQITGIKNEVLYD---KLVEEKTGKKYNRSYHMAFTGNPGTGKTTVAK 526
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
I+G++ Y +GIL T +V E QR+DLV ++G T KTR
Sbjct: 527 IMGKIFYNMGILATPKVVEAQRSDLVAGYIGQTAIKTR 564
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+ ++GL +KI++ K + +++RK G+ ++ HMAF GNPGTGKT VAR+LG
Sbjct: 198 LNKLIGLGSVKIEINKIISQIKFEQKRKQAGIINKNKQSYHMAFYGNPGTGKTTVARLLG 257
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+ +GIL + EV R DLV +++G T KT
Sbjct: 258 DIFKSLGILEKGHLVEVDRGDLVQQYIGATAIKT 291
>gi|228953983|ref|ZP_04116013.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229071205|ref|ZP_04204430.1| Stage V sporulation protein K [Bacillus cereus F65185]
gi|229080962|ref|ZP_04213476.1| Stage V sporulation protein K [Bacillus cereus Rock4-2]
gi|229179985|ref|ZP_04307330.1| Stage V sporulation protein K [Bacillus cereus 172560W]
gi|229191831|ref|ZP_04318804.1| Stage V sporulation protein K [Bacillus cereus ATCC 10876]
gi|365159515|ref|ZP_09355694.1| stage V sporulation protein K [Bacillus sp. 7_6_55CFAA_CT2]
gi|423425848|ref|ZP_17402879.1| stage V sporulation protein K [Bacillus cereus BAG3X2-2]
gi|423503612|ref|ZP_17480204.1| stage V sporulation protein K [Bacillus cereus HD73]
gi|449090650|ref|YP_007423091.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228591655|gb|EEK49501.1| Stage V sporulation protein K [Bacillus cereus ATCC 10876]
gi|228603519|gb|EEK60995.1| Stage V sporulation protein K [Bacillus cereus 172560W]
gi|228702379|gb|EEL54851.1| Stage V sporulation protein K [Bacillus cereus Rock4-2]
gi|228711946|gb|EEL63896.1| Stage V sporulation protein K [Bacillus cereus F65185]
gi|228805705|gb|EEM52294.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|363625091|gb|EHL76142.1| stage V sporulation protein K [Bacillus sp. 7_6_55CFAA_CT2]
gi|401111651|gb|EJQ19539.1| stage V sporulation protein K [Bacillus cereus BAG3X2-2]
gi|402458649|gb|EJV90394.1| stage V sporulation protein K [Bacillus cereus HD73]
gi|449024407|gb|AGE79570.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 318
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMEDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|423437166|ref|ZP_17414147.1| stage V sporulation protein K [Bacillus cereus BAG4X12-1]
gi|401121497|gb|EJQ29288.1| stage V sporulation protein K [Bacillus cereus BAG4X12-1]
Length = 318
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMEDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|399055650|ref|ZP_10743345.1| AAA+ family ATPase [Brevibacillus sp. CF112]
gi|433546755|ref|ZP_20503059.1| stage V sporulation protein K [Brevibacillus agri BAB-2500]
gi|398046859|gb|EJL39443.1| AAA+ family ATPase [Brevibacillus sp. CF112]
gi|432181975|gb|ELK39572.1| stage V sporulation protein K [Brevibacillus agri BAB-2500]
Length = 319
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A SE + DELEN ++GL E K + + + +++ R+ LK+ ++ HM F
Sbjct: 49 APSELASLFDELEN----LIGLQEAKKTMYEIYALIKINKEREKHHLKI-EKQVFHMVFK 103
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GNPGTGKT VAR+ G++ +GIL + EV+R DLVGEF+GHT KTR V L I
Sbjct: 104 GNPGTGKTTVARLFGKMFREMGILSKGHLIEVERADLVGEFIGHTAQKTRELVKKALGGI 163
Query: 310 TCL 312
+
Sbjct: 164 LFI 166
>gi|224024849|ref|ZP_03643215.1| hypothetical protein BACCOPRO_01580 [Bacteroides coprophilus DSM
18228]
gi|224018084|gb|EEF76083.1| hypothetical protein BACCOPRO_01580 [Bacteroides coprophilus DSM
18228]
Length = 625
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 60/101 (59%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
E EL +VGLH +K + + +RRK L L G HM FLGNPGTGKT VAR
Sbjct: 334 ELELQEMVGLHRVKEDMAEARMMACFLQRRKDLSLDSGTENRHHMLFLGNPGTGKTTVAR 393
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ G++ + +G+L + EV RTDLVGE++G T K + +
Sbjct: 394 LAGKMYHYIGVLSSGHTVEVSRTDLVGEYIGQTEKKMKEVI 434
>gi|228922421|ref|ZP_04085725.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|229151910|ref|ZP_04280107.1| Stage V sporulation protein K [Bacillus cereus m1550]
gi|423581921|ref|ZP_17558032.1| stage V sporulation protein K [Bacillus cereus VD014]
gi|423635519|ref|ZP_17611172.1| stage V sporulation protein K [Bacillus cereus VD156]
gi|228631566|gb|EEK88198.1| Stage V sporulation protein K [Bacillus cereus m1550]
gi|228837246|gb|EEM82583.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|401213785|gb|EJR20523.1| stage V sporulation protein K [Bacillus cereus VD014]
gi|401277462|gb|EJR83404.1| stage V sporulation protein K [Bacillus cereus VD156]
Length = 318
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|218235138|ref|YP_002368513.1| stage V sporulation protein K [Bacillus cereus B4264]
gi|228959919|ref|ZP_04121585.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047388|ref|ZP_04192985.1| Stage V sporulation protein K [Bacillus cereus AH676]
gi|229111179|ref|ZP_04240735.1| Stage V sporulation protein K [Bacillus cereus Rock1-15]
gi|229128985|ref|ZP_04257959.1| Stage V sporulation protein K [Bacillus cereus BDRD-Cer4]
gi|229146278|ref|ZP_04274652.1| Stage V sporulation protein K [Bacillus cereus BDRD-ST24]
gi|296504213|ref|YP_003665913.1| cell division protein FtsH [Bacillus thuringiensis BMB171]
gi|423585879|ref|ZP_17561966.1| stage V sporulation protein K [Bacillus cereus VD045]
gi|423628792|ref|ZP_17604541.1| stage V sporulation protein K [Bacillus cereus VD154]
gi|423641207|ref|ZP_17616825.1| stage V sporulation protein K [Bacillus cereus VD166]
gi|423649572|ref|ZP_17625142.1| stage V sporulation protein K [Bacillus cereus VD169]
gi|423656565|ref|ZP_17631864.1| stage V sporulation protein K [Bacillus cereus VD200]
gi|218163095|gb|ACK63087.1| stage V sporulation protein K [Bacillus cereus B4264]
gi|228637197|gb|EEK93653.1| Stage V sporulation protein K [Bacillus cereus BDRD-ST24]
gi|228654483|gb|EEL10347.1| Stage V sporulation protein K [Bacillus cereus BDRD-Cer4]
gi|228672276|gb|EEL27564.1| Stage V sporulation protein K [Bacillus cereus Rock1-15]
gi|228723973|gb|EEL75321.1| Stage V sporulation protein K [Bacillus cereus AH676]
gi|228799771|gb|EEM46722.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|296325265|gb|ADH08193.1| cell division protein ftsH [Bacillus thuringiensis BMB171]
gi|401232534|gb|EJR39034.1| stage V sporulation protein K [Bacillus cereus VD045]
gi|401268639|gb|EJR74682.1| stage V sporulation protein K [Bacillus cereus VD154]
gi|401278471|gb|EJR84402.1| stage V sporulation protein K [Bacillus cereus VD166]
gi|401283601|gb|EJR89489.1| stage V sporulation protein K [Bacillus cereus VD169]
gi|401291087|gb|EJR96771.1| stage V sporulation protein K [Bacillus cereus VD200]
Length = 318
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|228909531|ref|ZP_04073355.1| Stage V sporulation protein K [Bacillus thuringiensis IBL 200]
gi|228850122|gb|EEM94952.1| Stage V sporulation protein K [Bacillus thuringiensis IBL 200]
Length = 318
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|206968710|ref|ZP_03229665.1| stage V sporulation protein K [Bacillus cereus AH1134]
gi|423385214|ref|ZP_17362470.1| stage V sporulation protein K [Bacillus cereus BAG1X1-2]
gi|423412487|ref|ZP_17389607.1| stage V sporulation protein K [Bacillus cereus BAG3O-2]
gi|423431728|ref|ZP_17408732.1| stage V sporulation protein K [Bacillus cereus BAG4O-1]
gi|423528429|ref|ZP_17504874.1| stage V sporulation protein K [Bacillus cereus HuB1-1]
gi|206735751|gb|EDZ52909.1| stage V sporulation protein K [Bacillus cereus AH1134]
gi|401103315|gb|EJQ11297.1| stage V sporulation protein K [Bacillus cereus BAG3O-2]
gi|401117797|gb|EJQ25633.1| stage V sporulation protein K [Bacillus cereus BAG4O-1]
gi|401638310|gb|EJS56061.1| stage V sporulation protein K [Bacillus cereus BAG1X1-2]
gi|402450768|gb|EJV82594.1| stage V sporulation protein K [Bacillus cereus HuB1-1]
Length = 318
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|228940784|ref|ZP_04103345.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228973703|ref|ZP_04134283.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980261|ref|ZP_04140573.1| Stage V sporulation protein K [Bacillus thuringiensis Bt407]
gi|384187708|ref|YP_005573604.1| cell division protein ftsH [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676027|ref|YP_006928398.1| stage V sporulation protein K [Bacillus thuringiensis Bt407]
gi|452200085|ref|YP_007480166.1| Stage V sporulation protein SpoVK [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228779493|gb|EEM27748.1| Stage V sporulation protein K [Bacillus thuringiensis Bt407]
gi|228786026|gb|EEM34025.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818899|gb|EEM64963.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941417|gb|AEA17313.1| cell division protein ftsH [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409175156|gb|AFV19461.1| stage V sporulation protein K [Bacillus thuringiensis Bt407]
gi|452105478|gb|AGG02418.1| Stage V sporulation protein SpoVK [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 318
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|75762918|ref|ZP_00742725.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218898804|ref|YP_002447215.1| stage V sporulation protein K [Bacillus cereus G9842]
gi|228902209|ref|ZP_04066371.1| Stage V sporulation protein K [Bacillus thuringiensis IBL 4222]
gi|228966601|ref|ZP_04127652.1| Stage V sporulation protein K [Bacillus thuringiensis serovar sotto
str. T04001]
gi|402558991|ref|YP_006601715.1| stage V sporulation protein K [Bacillus thuringiensis HD-771]
gi|423359309|ref|ZP_17336812.1| stage V sporulation protein K [Bacillus cereus VD022]
gi|423561892|ref|ZP_17538168.1| stage V sporulation protein K [Bacillus cereus MSX-A1]
gi|434376764|ref|YP_006611408.1| stage V sporulation protein K [Bacillus thuringiensis HD-789]
gi|74489595|gb|EAO53004.1| Stage V sporulation protein K [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218545445|gb|ACK97839.1| stage V sporulation protein K [Bacillus cereus G9842]
gi|228793123|gb|EEM40675.1| Stage V sporulation protein K [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228857444|gb|EEN01942.1| Stage V sporulation protein K [Bacillus thuringiensis IBL 4222]
gi|401083865|gb|EJP92117.1| stage V sporulation protein K [Bacillus cereus VD022]
gi|401201215|gb|EJR08089.1| stage V sporulation protein K [Bacillus cereus MSX-A1]
gi|401787643|gb|AFQ13682.1| stage V sporulation protein K [Bacillus thuringiensis HD-771]
gi|401875321|gb|AFQ27488.1| stage V sporulation protein K [Bacillus thuringiensis HD-789]
Length = 318
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +E E+ +VG+ ++K +++ + ++++R+ GLK ++ HM F GNPGTGKT
Sbjct: 45 LQRIEEEMGKLVGMDDIKKIIKEIYAWIYVNKKRQEKGLK-SEKQVLHMLFKGNPGTGKT 103
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR++G+LL+ + IL + E +R DLVGE++GHT KTR
Sbjct: 104 TVARMIGKLLFEMNILSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|365853294|ref|ZP_09393575.1| putative stage V sporulation protein K [Lactobacillus
parafarraginis F0439]
gi|363712848|gb|EHL96520.1| putative stage V sporulation protein K [Lactobacillus
parafarraginis F0439]
Length = 838
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTM 258
L +EL +VGL +K + +D K L K+ ++ P HM F GNPGTGKT
Sbjct: 577 LLSELDAMVGLDNVKSFVHDLVNRATVD---KKLADKLPSKEKPTYHMVFTGNPGTGKTT 633
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+AR++ ++ Y +GIL D V+EV R+DLVGE++GHT KTR+ V
Sbjct: 634 IARLIAQIFYNLGILQKDTVSEVSRSDLVGEYIGHTEAKTRKVV 677
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L+ +VGL ++K + K+ + +++RKA L + H +LGNPGTGKT VAR++
Sbjct: 308 QLNAMVGLGDVKAAVTKFINLAVFNQKRKAKNLPT-ISQSYHSIYLGNPGTGKTTVARLV 366
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+++Y G++P D+ EV R +LV VG T +T++
Sbjct: 367 AKIMYEKGVMPKDKYVEVSRQNLVSPNVGGTAVQTKK 403
>gi|392375215|ref|YP_003207048.1| CbbX-like protein, containing AAA-ATPase domain [Candidatus
Methylomirabilis oxyfera]
gi|258592908|emb|CBE69217.1| putative CbbX-like protein, containing AAA-ATPase domain
[Candidatus Methylomirabilis oxyfera]
Length = 320
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 8/110 (7%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFL 249
S+ + +D+L+ EL VGL +K ++R+ A +L+D RK+LGL G PP HM F
Sbjct: 33 SQIQEILDKLDREL---VGLKPIKTRIREIAALLLVDRVRKSLGLMSG---PPSLHMCFT 86
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 87 GNPGTGKTTVAMRMAEILHRLGYIRKCNLAAVTRDDLVGQYIGHTAPKTK 136
>gi|452992198|emb|CCQ96356.1| mother cell sporulation ATPase [Clostridium ultunense Esp]
Length = 313
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL ELK + + + ++++R LGLK + HM F GNPGTGKT VARI
Sbjct: 52 QELDRLVGLEELKRLIFEIFALLYVNQKRSELGLKTEPQ-VFHMIFRGNPGTGKTTVARI 110
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LG + +G+L + EV+R DLVGE++GHT KTR
Sbjct: 111 LGNIFREMGVLSKGHLVEVERADLVGEYIGHTAQKTR 147
>gi|317129117|ref|YP_004095399.1| stage V sporulation protein K [Bacillus cellulosilyticus DSM 2522]
gi|315474065|gb|ADU30668.1| stage V sporulation protein K [Bacillus cellulosilyticus DSM 2522]
Length = 317
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+++ EL +GL +K +++ + L+++R+ GLK G ++ HM F GNPGTGKT V
Sbjct: 46 QIQYELDEFIGLSSIKQFMKEIYAWLYLNQKRQEQGLKTG-KQVLHMVFKGNPGTGKTTV 104
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ +L +G+L + E +R DLVGE++GHT KTR V L I +
Sbjct: 105 ARLIAKLFKDMGVLEKGHLIEAERADLVGEYIGHTAQKTRDLVQKALGGILFV 157
>gi|334136551|ref|ZP_08510012.1| ATPase, AAA family [Paenibacillus sp. HGF7]
gi|333605884|gb|EGL17237.1| ATPase, AAA family [Paenibacillus sp. HGF7]
Length = 251
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHM 246
L+ SET +E EL+ ++GL E+K + + + +++ R A GLK ++ HM
Sbjct: 53 TLDIQSET---FNETLKELNTMIGLQEVKDLIYQMYATLHINKLRSAAGLKDNSQ-VYHM 108
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VARIL +L +G+L + EV+R DLVGE++GHT KTR
Sbjct: 109 IFKGNPGTGKTTVARILAKLFKSLGVLSKGHLIEVERADLVGEYIGHTAIKTR 161
>gi|223983125|ref|ZP_03633321.1| hypothetical protein HOLDEFILI_00601, partial [Holdemania
filiformis DSM 12042]
gi|223964931|gb|EEF69247.1| hypothetical protein HOLDEFILI_00601 [Holdemania filiformis DSM
12042]
Length = 644
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
K +D + E+ IVGL E+K L+ + + + R+ GLK A HM F GNPGT
Sbjct: 376 KDDLDAIRKEMDAIVGLQEVKDTLQSMEEHYKVTQLRQKQGLK-AAPLSRHMIFTGNPGT 434
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT +AR++ RL +G+L ++ EV R+DLVG +VGHT P T++ +
Sbjct: 435 GKTTMARLVARLFKALGLLSQGQLIEVSRSDLVGRYVGHTAPLTQQII 482
>gi|330470653|ref|YP_004408396.1| ATPase central domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328813624|gb|AEB47796.1| ATPase central domain-containing protein [Verrucosispora maris
AB-18-032]
Length = 559
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ A++D+L EL +VGL +K ++R + ++E R++ GL VGA H+ F G P
Sbjct: 284 QDTARVDKLLAELEQMVGLESVKEEVRALIDEIQVNEWRRSAGLPVGAV-SHHLIFAGAP 342
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKT VARI G LL +G LP EV R DLVG+++GHT KT
Sbjct: 343 GTGKTTVARIYGDLLAALGALPGGAFREVSRRDLVGQYIGHTAEKT 388
>gi|332981964|ref|YP_004463405.1| AAA ATPase central domain-containing protein [Mahella australiensis
50-1 BON]
gi|332699642|gb|AEE96583.1| AAA ATPase central domain protein [Mahella australiensis 50-1 BON]
Length = 316
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL +++GL +K + + + + +RRK G+ A HM F GNPGTGKT+V
Sbjct: 48 EAKKELFSLIGLENIKKLVEELQAYINIQQRRKMEGMAHDAM-TLHMIFKGNPGTGKTIV 106
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR+LG++L+ +GIL + EV+R DLVGE++GHT K R +V
Sbjct: 107 ARLLGKMLHGMGILRVGHIIEVERADLVGEYIGHTAQKVREQV 149
>gi|307709279|ref|ZP_07645737.1| stage V sporulation protein K [Streptococcus mitis SK564]
gi|307619862|gb|EFN98980.1| stage V sporulation protein K [Streptococcus mitis SK564]
Length = 373
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E + K+ +++L EL+ +VGL +K ++ + + +RK GL + +R HMAF
Sbjct: 88 ELGQQKKSSLNDLLAELNQLVGLERVKKEVSRLIIYQKVQSKRKESGLNI-PKRTLHMAF 146
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+GNPGTGKT VARI+GR+ Y +G+L EV RTDL+ + G T K + +
Sbjct: 147 MGNPGTGKTTVARIIGRMYYQLGLLSKGHFLEVSRTDLIAGYQGQTALKVKNVI 200
>gi|289168296|ref|YP_003446565.1| ATPases of the AAA+ class [Streptococcus mitis B6]
gi|288907863|emb|CBJ22703.1| ATPases of the AAA+ class [Streptococcus mitis B6]
Length = 920
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D LE +L N++G+ ++K Q+ ++ L+++R+ G V + H FLGNPGTGKT
Sbjct: 656 DALE-QLQNLIGIEKVKKQVEQFISLAELNKKREEQGAAV-SEFSLHSLFLGNPGTGKTT 713
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VARI+G++LY GI+P ++ EV R+DLV +VG T KT+
Sbjct: 714 VARIVGKILYQKGIIPQNKFIEVSRSDLVAGYVGQTAIKTQ 754
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
+EE E SET + + E EL +++GL+ +K +++K + + +++R + GL +
Sbjct: 361 NEESTNSEPQEEISETIER--DYEEELYSLIGLNNVKKEVQKLLRTVEFNQKRLSEGLPI 418
Query: 239 GARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTD--RVTEVQRTDLVGEFVGHTGP 296
+ H F GNPGTGKT VAR+LGR+L+ G+LP D + EV +DL+ +G T
Sbjct: 419 -QEQSLHSVFTGNPGTGKTTVARLLGRVLFDRGVLPGDEFKFIEVSESDLIATHIGETAV 477
Query: 297 KTR 299
+T+
Sbjct: 478 QTQ 480
>gi|256546101|ref|ZP_05473454.1| stage V sporulation protein K [Anaerococcus vaginalis ATCC 51170]
gi|256398218|gb|EEU11842.1| stage V sporulation protein K [Anaerococcus vaginalis ATCC 51170]
Length = 936
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
N+L N++G+ ++K Q+ ++ L+++R+ G K+ H FLGNPGTGKT VARI
Sbjct: 680 NKLQNLIGIDQVKRQVDEFISMAELNKKRRDSGQKI-QNFTLHSLFLGNPGTGKTTVARI 738
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LG LLY I+ ++ EV R+DLV ++G T KTR
Sbjct: 739 LGNLLYQKSIIKENKFIEVSRSDLVAGYIGQTAIKTR 775
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 202 ENELS------NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
ENELS +VGL+ +K ++ K + + + +R +G + H FLGNPGTG
Sbjct: 396 ENELSPYDKLNKLVGLNSVKNEINKMIRMVEFNNKRIQMGF-LPEENSLHSVFLGNPGTG 454
Query: 256 KTMVARILGRLLYMVGILPTDR---VTEVQRTDLVGEFVGHTGPKTRR 300
KT VAR++G +L+ L E +DL+ VG T +T +
Sbjct: 455 KTTVARLIGEILFEYKALYNKEEFIFIEASESDLISSNVGQTAEQTYK 502
>gi|410584479|ref|ZP_11321582.1| AAA+ family ATPase [Thermaerobacter subterraneus DSM 13965]
gi|410504414|gb|EKP93925.1| AAA+ family ATPase [Thermaerobacter subterraneus DSM 13965]
Length = 343
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 179 SEEQRKR-RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
+E+QR+R R +EA EL ++GLH +K +R+ + + ERR GL
Sbjct: 59 TEDQRQREREIEAAL----------AELDALIGLHHVKRVVREIRAYVTVRERRARAGL- 107
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
+ HM F GNPGTGKT VARIL RL +G+L + EV+R DLVGE++GHT K
Sbjct: 108 INEPLTLHMVFTGNPGTGKTTVARILARLFRALGVLEKGHLVEVERADLVGEYIGHTAQK 167
Query: 298 TRRRVGHLLSEITCL 312
TR+ + L + +
Sbjct: 168 TRQVIHQALGGVLFI 182
>gi|390630584|ref|ZP_10258563.1| Stage V sporulation protein K [Weissella confusa LBAE C39-2]
gi|390484141|emb|CCF30911.1| Stage V sporulation protein K [Weissella confusa LBAE C39-2]
Length = 367
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 2/121 (1%)
Query: 182 QRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGAR 241
+R+ +L+ S+T ++EL N+L+ +VGL ++K Q+ + + + R+A GL
Sbjct: 75 EREYVSLKEASQT-VPLNELLNQLNGLVGLQDVKAQINRLIAFQKVQQMRQANGLATD-N 132
Query: 242 RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
HMAFLGNPGT KT VARI+GR+ +G+L E RTDL+ E+ G T K R+
Sbjct: 133 GTKHMAFLGNPGTAKTTVARIVGRMYKSLGLLSKGHFIEASRTDLIAEYQGQTATKVRKL 192
Query: 302 V 302
+
Sbjct: 193 I 193
>gi|332799278|ref|YP_004460777.1| stage V sporulation protein K [Tepidanaerobacter acetatoxydans Re1]
gi|438002409|ref|YP_007272152.1| Stage V sporulation protein whose disruption leads to the
production of immature spores (SpoVK) [Tepidanaerobacter
acetatoxydans Re1]
gi|332697013|gb|AEE91470.1| stage V sporulation protein K [Tepidanaerobacter acetatoxydans Re1]
gi|432179203|emb|CCP26176.1| Stage V sporulation protein whose disruption leads to the
production of immature spores (SpoVK) [Tepidanaerobacter
acetatoxydans Re1]
Length = 335
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHM 246
E S+ + K++++ EL ++GL ++K L K + +R++A + + HM
Sbjct: 46 TFEKVSDEEEKLEDIMKELDELIGLSKVK-NLVKEIQAFSEIQRKRAEEKLLAEPQVLHM 104
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
F GNPGTGKT VAR+LG++ +GIL EV+R D+VGE++GHT KTR ++
Sbjct: 105 IFKGNPGTGKTTVARLLGKIFKHIGILEKGHTVEVERADIVGEYIGHTAQKTRDQI 160
>gi|182418782|ref|ZP_02950050.1| stage V sporulation protein K [Clostridium butyricum 5521]
gi|237668580|ref|ZP_04528564.1| stage V sporulation protein K [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377381|gb|EDT74940.1| stage V sporulation protein K [Clostridium butyricum 5521]
gi|237656928|gb|EEP54484.1| stage V sporulation protein K [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 909
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E E +L ++VGL +K ++ + L R+K +G+ +M F GNPGTGKT
Sbjct: 645 IKEYETQLESLVGLDNVKNLIKDILNTVELIHRKKEMGINC-EDVSLNMIFSGNPGTGKT 703
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+G++L +GIL + EV R+DLVG++VG TGPKT ++
Sbjct: 704 TVARIVGKILKAMGILKKGHMVEVTRSDLVGQYVGQTGPKTLEKI 748
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGM-LLDERRKALGLK 237
SE Q+ ++ E + + LE +L+++ GL +K ++ + + + + R + L +
Sbjct: 351 SEFQKNSKSNEGERNSNTLEEALE-KLNSLTGLKNVKKEIERIVRLIKYVKNRNEVLKIN 409
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
H AF+GNPGTGKT VAR++G + Y +GIL V EV R+D+VG+F+G T
Sbjct: 410 KEINLSYHFAFMGNPGTGKTTVARLIGDIFYYLGILEKGHVVEVDRSDIVGKFIGETAKL 469
Query: 298 TRRRV 302
T++ +
Sbjct: 470 TKKAI 474
>gi|196248596|ref|ZP_03147297.1| stage V sporulation protein K [Geobacillus sp. G11MC16]
gi|196212321|gb|EDY07079.1| stage V sporulation protein K [Geobacillus sp. G11MC16]
Length = 310
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
++ EL ++GL +K +++ + + RRK GLK R+ HM F GNPGTGKT VA
Sbjct: 45 IQKELDQLIGLDHVKKIVKEIYAWLYISRRRKENGLKAN-RQALHMIFKGNPGTGKTTVA 103
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R+LG+L + + +L E +R DLVGE++GHT KTR
Sbjct: 104 RLLGKLFFEMNVLSKGHFIEAERADLVGEYIGHTANKTR 142
>gi|138894833|ref|YP_001125286.1| stage V sporulation protein K [Geobacillus thermodenitrificans
NG80-2]
gi|134266346|gb|ABO66541.1| Stage V sporulation protein K [Geobacillus thermodenitrificans
NG80-2]
Length = 305
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
++ EL ++GL +K +++ + + RRK GLK R+ HM F GNPGTGKT VA
Sbjct: 40 IQKELDQLIGLDHVKKIVKEIYAWLYISRRRKENGLKAN-RQALHMIFKGNPGTGKTTVA 98
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R+LG+L + + +L E +R DLVGE++GHT KTR
Sbjct: 99 RLLGKLFFEMNVLSKGHFIEAERADLVGEYIGHTANKTR 137
>gi|404330953|ref|ZP_10971401.1| stage V sporulation protein K [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 322
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
M+ +E L ++VGL E+K +R+ + + +R+A L VG R+ HM F GNPGTGKT
Sbjct: 40 MENVEKVLDDLVGLDEVKRMVRELYAWLYVRRKRQAADLSVG-RQSFHMLFKGNPGTGKT 98
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+L L + ILP ++ E +R DLVGE++G T KTR
Sbjct: 99 TVARMLSGLFRDMEILPKGQMIEAERADLVGEYIGQTAQKTR 140
>gi|150390303|ref|YP_001320352.1| ATPase central domain-containing protein [Alkaliphilus
metalliredigens QYMF]
gi|149950165|gb|ABR48693.1| AAA ATPase, central domain protein [Alkaliphilus metalliredigens
QYMF]
Length = 319
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 90/160 (56%), Gaps = 6/160 (3%)
Query: 158 PLDHLSNGPGSAK--LRELLLWHSEEQRKRRALEACSETKAKMDELEN---ELSNIVGLH 212
P + G S+ +R+++++ + Q + ++ + + + L+N EL+ ++GL
Sbjct: 4 PFNAFRKGDISSNELIRQMIVFETTSQSQSQSEKPFISKEQDIQSLDNLLEELNELIGLK 63
Query: 213 ELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGI 272
++K+ + + + + R+ GL+ A HM F GNPGTGKT +AR+LG++ +GI
Sbjct: 64 KVKVLVNEMIAYTEMQQIRRNAGLQ-SAPLVLHMIFKGNPGTGKTTIARLLGKIFCAMGI 122
Query: 273 LPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
L + E++R DLVGE++GHT K +++V L I +
Sbjct: 123 LKKGHLIEIERADLVGEYIGHTAQKVKQQVKDALGGILFI 162
>gi|403069103|ref|ZP_10910435.1| stage V sporulation protein K [Oceanobacillus sp. Ndiop]
Length = 301
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+++E ++ VG+ LK +++ L++E+RK +GL+ +++ HM F GNPGTGKT VA
Sbjct: 38 IDHEFASFVGMKTLKKSIKEVYANYLINEKRKDMGLR-DSKQVLHMLFKGNPGTGKTTVA 96
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R L ++ Y + IL E +R DLVGE++G T KTR
Sbjct: 97 RKLAKIYYDMNILSKGHFIEAERADLVGEYIGQTAQKTR 135
>gi|317121917|ref|YP_004101920.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315591897|gb|ADU51193.1| AAA ATPase central domain protein [Thermaerobacter marianensis DSM
12885]
Length = 342
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 88/176 (50%), Gaps = 21/176 (11%)
Query: 153 NEGKTPLDHLSNGPGSAKLRELLLWHSEEQ-------------RKRRALEACSETKAKMD 199
+G+ P S P + L E++ W E + + A E + + +
Sbjct: 11 QDGRVP----SQPPQPSSLDEVIRWIEEGRITPPQAVVYLHRLEREPAPETADDERQRER 66
Query: 200 ELEN---ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
E+E +L ++GLH +K +R+ + + ERR GL + HM F GNPGTGK
Sbjct: 67 EIEAAMADLDALIGLHHVKRVIREMRAYVTVRERRARAGL-INEPLTLHMVFTGNPGTGK 125
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
T VARI+ RL +G+L + EV+R DLVGE++GHT KTR+ + L + +
Sbjct: 126 TTVARIVARLFRALGVLEKGHLVEVERADLVGEYIGHTAQKTRQVIHQALGGVLFI 181
>gi|163942292|ref|YP_001647176.1| ATPase central domain-containing protein [Bacillus
weihenstephanensis KBAB4]
gi|163864489|gb|ABY45548.1| AAA ATPase central domain protein [Bacillus weihenstephanensis
KBAB4]
Length = 466
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL +K ++++ ++ ++ RK G+K HM F GNPGTGKT VAR++
Sbjct: 199 ELDELIGLQSVKQKVKEIYNLVIFNQMRKEQGMKTD-NLSLHMIFTGNPGTGKTTVARLV 257
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
++ +G+L + E R++LVGEF+GHT PKT +++ L
Sbjct: 258 AKIFKALGVLSKGHLVETDRSELVGEFIGHTAPKTMKKIKEAL 300
>gi|312111553|ref|YP_003989869.1| stage V sporulation protein K [Geobacillus sp. Y4.1MC1]
gi|336235939|ref|YP_004588555.1| stage V sporulation protein K [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216654|gb|ADP75258.1| stage V sporulation protein K [Geobacillus sp. Y4.1MC1]
gi|335362794|gb|AEH48474.1| stage V sporulation protein K [Geobacillus thermoglucosidasius
C56-YS93]
Length = 305
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +++ EL ++GL +K +++ + +D+ RK GLK ++ HM F GNPGTGKT
Sbjct: 37 LKDIQKELDQLIGLDHVKKIIKEIYAWLYIDKVRKENGLK-SNKQALHMIFKGNPGTGKT 95
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+LG+L + + +L E +R DLVGE++GHT KTR
Sbjct: 96 TVARLLGKLFFEMNVLSKGHFIEAERADLVGEYIGHTANKTR 137
>gi|375092999|ref|ZP_09739264.1| AAA+ family ATPase [Saccharomonospora marina XMU15]
gi|374653732|gb|EHR48565.1| AAA+ family ATPase [Saccharomonospora marina XMU15]
Length = 560
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
++D+L EL ++GL +K ++R + ++E R++ GL VG H+ F G PGTGK
Sbjct: 287 QVDKLLGELDAMIGLAGVKAEVRGLIDEIQVNEWRRSEGLSVGTV-SNHLVFAGAPGTGK 345
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
T VARI G+LL +GILP + EV R DLVG+++GHT K
Sbjct: 346 TTVARIYGQLLKALGILPHGKFKEVSRRDLVGQYIGHTAEK 386
>gi|423720483|ref|ZP_17694665.1| stage V sporulation protein K [Geobacillus thermoglucosidans
TNO-09.020]
gi|383366538|gb|EID43828.1| stage V sporulation protein K [Geobacillus thermoglucosidans
TNO-09.020]
Length = 310
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +++ EL ++GL +K +++ + +D+ RK GLK ++ HM F GNPGTGKT
Sbjct: 42 LKDIQKELDQLIGLDHVKKIIKEIYAWLYIDKVRKENGLK-SNKQALHMIFKGNPGTGKT 100
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+LG+L + + +L E +R DLVGE++GHT KTR
Sbjct: 101 TVARLLGKLFFEMNVLSKGHFIEAERADLVGEYIGHTANKTR 142
>gi|42519607|ref|NP_965537.1| hypothetical protein LJ1732 [Lactobacillus johnsonii NCC 533]
gi|41583896|gb|AAS09503.1| hypothetical protein LJ_1732 [Lactobacillus johnsonii NCC 533]
Length = 665
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L ++GL +K Q++++ +L+++R+ GL ++ H FLGNPGTGKT VARI+
Sbjct: 407 QLDEMIGLETVKQQVKEFIAVTVLNKKREEKGLNTSSQ-TLHSLFLGNPGTGKTTVARIV 465
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G +LY G++ D++ E R DLV +VG T KTR+
Sbjct: 466 GHVLYEKGVIAEDKLIETSRADLVAGYVGQTAEKTRK 502
>gi|338814531|ref|ZP_08626545.1| stage V sporulation protein K [Acetonema longum DSM 6540]
gi|337273467|gb|EGO62090.1| stage V sporulation protein K [Acetonema longum DSM 6540]
Length = 164
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL E+K +R+ + + +RR+ L V HM F GNPGTGKT VARI+
Sbjct: 57 ELDALIGLKEVKKLVREIYAFVEIQKRRQKENL-VAEPLVLHMIFKGNPGTGKTTVARII 115
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
G++ +G+LP + E++R DLVGE++GHT KTR ++
Sbjct: 116 GKIFREIGVLPKGHLIEIERADLVGEYIGHTAQKTREQI 154
>gi|417838090|ref|ZP_12484328.1| ATPase, AAA family protein [Lactobacillus johnsonii pf01]
gi|338761633|gb|EGP12902.1| ATPase, AAA family protein [Lactobacillus johnsonii pf01]
Length = 665
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L ++GL +K Q++++ +L+++R+ GL ++ H FLGNPGTGKT VARI+
Sbjct: 407 QLDEMIGLETVKQQVKEFIAVTVLNKKREEKGLNTSSQ-TLHSLFLGNPGTGKTTVARIV 465
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G +LY G++ D++ E R DLV +VG T KTR+
Sbjct: 466 GHVLYEKGVIAEDKLIETSRADLVAGYVGQTAEKTRK 502
>gi|82701817|ref|YP_411383.1| AAA ATPase [Nitrosospira multiformis ATCC 25196]
gi|82409882|gb|ABB73991.1| AAA ATPase, central region [Nitrosospira multiformis ATCC 25196]
Length = 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 69/110 (62%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S K +D+L+ EL +GL +K ++R+ A +L+D RK L L GA P HM+F
Sbjct: 24 ASNIKEVLDKLDREL---IGLKPVKTRIRETAALLLVDRVRKKLDLTAGA--PSLHMSFT 78
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA+ + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 79 GNPGTGKTTVAQRMSEILHRLGYVREGHLVSVTRDDLVGQYIGHTAPKTK 128
>gi|385826409|ref|YP_005862751.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|329667853|gb|AEB93801.1| hypothetical protein LJP_1481c [Lactobacillus johnsonii DPC 6026]
Length = 661
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L ++GL +K Q++++ +L+++R+ GL ++ H FLGNPGTGKT VARI+
Sbjct: 403 QLDEMIGLETVKQQVKEFIAVTVLNKKREEKGLNTSSQ-TLHSLFLGNPGTGKTTVARIV 461
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G +LY G++ D++ E R DLV +VG T KTR+
Sbjct: 462 GHVLYEKGVIAEDKLIETSRADLVAGYVGQTAEKTRK 498
>gi|390566892|ref|ZP_10247245.1| CbbX protein [Burkholderia terrae BS001]
gi|420255213|ref|ZP_14758157.1| putative Rubsico expression protein CbbX [Burkholderia sp. BT03]
gi|389941276|gb|EIN03052.1| CbbX protein [Burkholderia terrae BS001]
gi|398046365|gb|EJL38982.1| putative Rubsico expression protein CbbX [Burkholderia sp. BT03]
Length = 323
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 73/125 (58%), Gaps = 3/125 (2%)
Query: 176 LWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALG 235
L +E Q R L A D L+ ++VGL +K ++R+ A +L+ R+ALG
Sbjct: 9 LAQNETQAPRVDLLALFRESGIADVLDELDRDLVGLAPVKTRIREVAAQLLVGRAREALG 68
Query: 236 LKVGARRPP-HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
++ GA P HM F GNPGTGKT VA + +L+ +G + + + V R DLVG+++GHT
Sbjct: 69 IESGA--PTLHMCFSGNPGTGKTTVALRMADVLFRLGYIRRNHLVSVTRDDLVGQYIGHT 126
Query: 295 GPKTR 299
PKTR
Sbjct: 127 APKTR 131
>gi|383776547|ref|YP_005461113.1| putative AAA ATPase [Actinoplanes missouriensis 431]
gi|381369779|dbj|BAL86597.1| putative AAA ATPase [Actinoplanes missouriensis 431]
Length = 546
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
+A + A ++ L +EL +++GL +K ++R + ++E R++ GL VGA H+ F
Sbjct: 265 KAGAHDDADVERLLSELDSMIGLAGVKGEVRALIDEIQVNEWRRSAGLSVGAV-SHHLIF 323
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
G PGTGKT VARI G+LL +G+LP + EV R DLVG+++GHT K
Sbjct: 324 TGAPGTGKTTVARIYGQLLKALGVLPNGQFREVSRRDLVGQYIGHTAEK 372
>gi|51892883|ref|YP_075574.1| stage V sporulation protein K [Symbiobacterium thermophilum IAM
14863]
gi|51856572|dbj|BAD40730.1| stage V sporulation protein K [Symbiobacterium thermophilum IAM
14863]
Length = 333
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 9/109 (8%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL +VGL ++K +R+ + + RR GL A P HM F GNPGTGKT VAR
Sbjct: 64 ELERMVGLGQVKALVRELQAYIAIQLRRAKAGL---ASEPGSLHMIFTGNPGTGKTTVAR 120
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRRVGHLL 306
+LGRL +G+LP EV+R DLVGE++GHT +T RR +G LL
Sbjct: 121 LLGRLFKEMGVLPKGHTVEVERADLVGEYIGHTAQRTRDVVRRALGGLL 169
>gi|302389745|ref|YP_003825566.1| stage V sporulation protein K [Thermosediminibacter oceani DSM
16646]
gi|302200373|gb|ADL07943.1| stage V sporulation protein K [Thermosediminibacter oceani DSM
16646]
Length = 327
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 88/154 (57%), Gaps = 4/154 (2%)
Query: 159 LDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQL 218
+D L+ G + + +L+ +++K A++ +E K++++ EL ++VGL ++K QL
Sbjct: 21 IDMLAKGTITP-VEAFILFKEIDEKKSEAVKPPTE--EKIEDIMKELDSLVGLTKVK-QL 76
Query: 219 RKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRV 278
K + + ++R+ V HM F GNPGTGKT VAR+ G++ + +L +
Sbjct: 77 VKEIQAFVEIQKRRQKEQLVSEPLVLHMIFKGNPGTGKTTVARLFGKIFKQMDVLQKGHL 136
Query: 279 TEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
EV+R DLVGE++GHT KTR ++ L I +
Sbjct: 137 VEVERADLVGEYIGHTAQKTREQIRRALGGILFI 170
>gi|331266224|ref|YP_004325854.1| ATPase AAA [Streptococcus oralis Uo5]
gi|326682896|emb|CBZ00513.1| AAA family ATPase, putative [Streptococcus oralis Uo5]
Length = 362
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
+E +K ++ EA L N+L +++GL +K ++ + + R+ +GLK
Sbjct: 89 KETKKNKSFEA----------LANDLKSLIGLENVKKEIEDLVAFNKVQQSREKIGLK-K 137
Query: 240 ARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R HMAFLGNPGTGKT VARI+G + +GIL E RTDL+ E+ G T K +
Sbjct: 138 TNRTMHMAFLGNPGTGKTTVARIVGNMYRSLGILSKGHFIEASRTDLIAEYQGQTALKVK 197
Query: 300 RRV 302
R +
Sbjct: 198 RLI 200
>gi|209967300|ref|YP_002300215.1| Rubisco accessary protein AAA type ATPase CbbX [Rhodospirillum
centenum SW]
gi|209960766|gb|ACJ01403.1| Rubisco accessary protein AAA type ATPase CbbX [Rhodospirillum
centenum SW]
Length = 308
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMV 259
LE +VGL +K ++R+ A +L++ R++LG++ A PP HM F GNPGTGKT V
Sbjct: 39 LEQMDRELVGLKPVKTRIREIAALLLVERARRSLGMQ--ADPPPLHMCFTGNPGTGKTTV 96
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR + +L+ +G + D V V R DLVG+++GHT PKT+
Sbjct: 97 ARRMAGILHGLGYIRRDHVVSVTRDDLVGQYIGHTAPKTK 136
>gi|227889444|ref|ZP_04007249.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200]
gi|227849922|gb|EEJ60008.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200]
Length = 661
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L ++GL +K Q++++ +L+++R+ GL ++ H FLGNPGTGKT VARI+
Sbjct: 403 QLDEMIGLETVKQQVKEFIAVTVLNKKREEKGLNTSSQ-TLHSLFLGNPGTGKTTVARIV 461
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G +LY G++ D++ E R DLV +VG T KTR+
Sbjct: 462 GHVLYEKGVIAEDKLIETSRADLVAGYVGQTAEKTRK 498
>gi|270292603|ref|ZP_06198814.1| stage V sporulation protein K [Streptococcus sp. M143]
gi|270278582|gb|EFA24428.1| stage V sporulation protein K [Streptococcus sp. M143]
Length = 361
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+EL +EL++++GL +K ++ + + R+ +GLK R HMAFLGNPGTGKT
Sbjct: 96 FEELSDELNSLIGLENVKKEIEDLVIFNKVQKNREKIGLK-KTNRTMHMAFLGNPGTGKT 154
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+G + +GIL E RTDL+ E+ G T K +R +
Sbjct: 155 TVARIVGNMYRSLGILSKGHFIEATRTDLIAEYQGQTALKVKRLI 199
>gi|149242815|pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
gi|149242818|pdb|2P2C|Q Chain Q, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
gi|149242821|pdb|2P2C|R Chain R, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
gi|149242824|pdb|2P2C|S Chain S, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
gi|149242827|pdb|2P2C|T Chain T, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
gi|149242830|pdb|2P2C|U Chain U, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
Length = 169
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + + TPLH++A EIV+ LL++ ++ A + YG TPLH
Sbjct: 31 RILMANGADVNATDW-LGHTPLHLAAKTGHLEIVEVLLKYG----ADVNAWDNYGATPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA NG E ++LL HGA + AK G TPLHL+ + V+ LL+Y AD +A
Sbjct: 86 LAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAY----DGHLEIVEVLLKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A G TPLHL+ ++ V+ LL+Y AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDWLGHTPLHLAA----KTGHLEIVEVLLKYGADVNAW 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
DN G TPL HL+ G ++ E+LL H + +
Sbjct: 77 DNYGATPL-HLAADNGHLEIVEVLLKHGADVNAK 109
>gi|381210069|ref|ZP_09917140.1| stage V sporulation protein K [Lentibacillus sp. Grbi]
Length = 308
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 7/124 (5%)
Query: 182 QRKRRALEACSETKAKMDE------LENELSNIVGLHELKIQLRKWAKGMLLDERRKALG 235
Q K+R A E K + E ++ E S+ +G+ LK +++ ++++E+R+ +G
Sbjct: 18 QDKQRDATADEEGKKCLTESNSFSHIDTEFSSFIGMKRLKRTIKEIYATIVINEKRREIG 77
Query: 236 LKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
L G ++ HM F GNPGTGKT VAR L R+ + + +L E +R DLVGE++G T
Sbjct: 78 LP-GTKQVLHMLFKGNPGTGKTTVARKLARMYFEMDLLSKGHFIEAERADLVGEYIGQTA 136
Query: 296 PKTR 299
KTR
Sbjct: 137 QKTR 140
>gi|302875527|ref|YP_003844160.1| AAA ATPase [Clostridium cellulovorans 743B]
gi|307687981|ref|ZP_07630427.1| AAA ATPase central domain-containing protein [Clostridium
cellulovorans 743B]
gi|302578384|gb|ADL52396.1| AAA ATPase central domain protein [Clostridium cellulovorans 743B]
Length = 1219
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 62/103 (60%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L+ L+ I+GL E+K +R + L RK +G+ + + HM F GNPGTGKTMV
Sbjct: 956 DLDKALNKIIGLDEVKSYIRSLHARLRLQSERKKMGMIIDNSQTLHMIFKGNPGTGKTMV 1015
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR + +LY +G++ T+++ E R LV +VG T KT +V
Sbjct: 1016 ARTVADVLYNIGVIRTNKLVETDRASLVAGYVGQTAIKTTEKV 1058
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
+ +K++E++ EL++++GL ++K + + + R+ G K A HM F GNPG
Sbjct: 410 SASKLEEVKEELNSVIGLKKVKDYVLDLENNFKVQKMREDSGYK-AAEISKHMIFTGNPG 468
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
TGKT +ARI+ + L +G+L T ++ EV R DLV ++VGHT +T V
Sbjct: 469 TGKTTIARIVAKYLKAIGVLSTGQLREVTRADLVAQYVGHTAKQTNEVV 517
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 57/99 (57%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L+ LS I+GL +K +R ++ +E+R+ G+++ + +M F GNPGTGKT +
Sbjct: 683 DLDKALSEIIGLESVKDFVRTQYNLLVANEKRRKAGIELDTTQSLNMIFSGNPGTGKTTI 742
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
AR++ + +G+L + E R LV ++ G T KT
Sbjct: 743 ARVVASMFKEMGLLKKGHLVETDRGGLVAQYQGQTAVKT 781
>gi|357009750|ref|ZP_09074749.1| SpoVK [Paenibacillus elgii B69]
Length = 297
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 8/127 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
+A+EA S+ + EL ++GL E+K + + + + + R GL+V + H
Sbjct: 12 QAMEAFSD-------IYKELDKMIGLDEIKELVFQIYAILQIKQFRSQEGLQVSSN-VYH 63
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHL 305
M F GNPGTGKT VARI+G+L +G+L + EV+R DLVGE++GHT KTR V
Sbjct: 64 MIFKGNPGTGKTSVARIIGKLFRSMGLLSKGHLIEVERADLVGEYIGHTALKTREMVKKA 123
Query: 306 LSEITCL 312
L I +
Sbjct: 124 LGGILFI 130
>gi|268319985|ref|YP_003293641.1| hypothetical protein FI9785_1518 [Lactobacillus johnsonii FI9785]
gi|262398360|emb|CAX67374.1| hypothetical protein predicted by Glimmer/Critica [Lactobacillus
johnsonii FI9785]
Length = 661
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L ++GL +K Q++++ +L+++R+ GL ++ H FLGNPGTGKT VARI+
Sbjct: 403 QLDEMIGLETVKQQVKEFIAVTVLNKKREEKGLNTSSQ-TLHSLFLGNPGTGKTTVARIV 461
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G +LY G++ D++ E R DLV +VG T KTR+
Sbjct: 462 GHVLYEKGVIAEDKLIETSRADLVAGYVGQTAEKTRK 498
>gi|395238390|ref|ZP_10416320.1| Stage V sporulation protein K [Lactobacillus gigeriorum CRBIP
24.85]
gi|394477743|emb|CCI86297.1| Stage V sporulation protein K [Lactobacillus gigeriorum CRBIP
24.85]
Length = 949
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 69/109 (63%), Gaps = 1/109 (0%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S + ++ +L +++GL +K Q+ ++ L++++R+ +G + + H FLGN
Sbjct: 677 SYIEGSQEDAYEQLQHLIGLKRVKEQIDEFISMALINKKRQEMGYE-ASDYTLHSLFLGN 735
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
PGTGKT VAR++G+ LY G++ D+ EV R DLVG++VGHT TR+
Sbjct: 736 PGTGKTTVARLMGKTLYQKGVIRRDKFVEVTRADLVGKYVGHTAILTRK 784
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
K D +E L N+ GL +K Q++ + ++ RKA GLK H FLGNPGTGK
Sbjct: 409 KEDAMET-LMNLTGLGRVKEQIKTTTTLIKFNKIRKAQGLKT-ISNTLHAVFLGNPGTGK 466
Query: 257 TMVARILGRLLYMVGILPTD--RVTEVQRTDLVGEFVGHTGPKT 298
T VAR+ ++LY G+LP + + E R DLVG+ +G + KT
Sbjct: 467 TTVARLYAKILYDAGVLPGEEFKFVEAGREDLVGKVIGESAQKT 510
>gi|218289109|ref|ZP_03493345.1| AAA ATPase central domain protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218240692|gb|EED07871.1| AAA ATPase central domain protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 329
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNP 252
K ++ EL EL ++VGL E+K +R+ + + R+ LK P HM F GNP
Sbjct: 56 KRRIHELLRELDDLVGLEEVKRVVREIFALVYVQRLRREHRLKAD---PTVLHMIFYGNP 112
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
GTGKT VARIL R+ + G+L + EV+R DLVGE++GHT KTR ++ L + +
Sbjct: 113 GTGKTTVARILARMFHECGLLEKGHLVEVERADLVGEYIGHTAQKTREQIQKALGGVLFI 172
>gi|186471253|ref|YP_001862571.1| CbbX protein [Burkholderia phymatum STM815]
gi|184197562|gb|ACC75525.1| CbbX protein [Burkholderia phymatum STM815]
Length = 329
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-H 245
AL S +DEL+ +L VGL +K+++R+ A +L+ R+ALGL GA P H
Sbjct: 29 ALYRESGIAGVLDELDRDL---VGLVPVKMRIREIAAQLLVGRAREALGLGSGA--PTLH 83
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M F GNPGTGKT VA + +L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 84 MCFSGNPGTGKTTVALRMADVLFRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 137
>gi|366053574|ref|ZP_09451296.1| stage V sporulation protein K [Lactobacillus suebicus KCTC 3549]
Length = 847
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
+ E +D++ EL ++GL +K + K + D KALG HM F
Sbjct: 574 SAEEKSNNVDQIVAELDAMIGLKSVKDFVHNLVKQVQAD---KALGESSFGAGNYHMVFE 630
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
G PGTGKT VARI+ ++ Y +GIL D V EV RTDLVG ++GHT T+ +
Sbjct: 631 GEPGTGKTTVARIIAKIFYNLGILEKDTVKEVDRTDLVGAYIGHTEKNTKEVI 683
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL N++GL +K +K+ +++R+A GL + H FLGNPGTGKT VAR+L
Sbjct: 317 ELQNMIGLESVKETAKKFISLATYNKQREADGLP-QLDQSLHSLFLGNPGTGKTTVARLL 375
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ L+ G++ D++ EV R DLV + VG T +T++++
Sbjct: 376 AKALFEEGVIAEDKLVEVSRQDLVSQNVGGTAIQTKQKL 414
>gi|339484584|ref|YP_004696370.1| CbbX protein [Nitrosomonas sp. Is79A3]
gi|338806729|gb|AEJ02971.1| CbbX protein [Nitrosomonas sp. Is79A3]
Length = 313
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S + +D+L+ EL +GL +K ++R+ A +L+D RK LGL GA P HM F
Sbjct: 24 ASNIQEVLDKLDREL---IGLIPVKTRIRETAALLLVDRVRKQLGLSAGA--PSLHMCFT 78
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 79 GNPGTGKTTVALRMAEILHRLGYVREGHLVSVTRDDLVGQYIGHTAPKTK 128
>gi|398352974|ref|YP_006398438.1| protein CbbX [Sinorhizobium fredii USDA 257]
gi|390128300|gb|AFL51681.1| protein CbbX [Sinorhizobium fredii USDA 257]
Length = 311
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ R+A+GL + PP HM+F GNPGTG
Sbjct: 32 LDELDREL---VGLKPVKQRIRETAALLLVERARRAMGL---SHEPPSLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|423484121|ref|ZP_17460811.1| stage V sporulation protein K [Bacillus cereus BAG6X1-2]
gi|401139147|gb|EJQ46710.1| stage V sporulation protein K [Bacillus cereus BAG6X1-2]
Length = 463
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL +K ++++ ++ ++ RK G+K HM F GNPGTGKT VAR++
Sbjct: 196 ELDELIGLQSVKQKVKEIYNLVIFNQMRKEQGMKTD-NLSLHMIFTGNPGTGKTTVARLV 254
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
+ +G+L + E R++LVGEF+GHT PKT +++ L
Sbjct: 255 AEIFKALGVLSKGHLVEADRSELVGEFIGHTAPKTMKKIKEAL 297
>gi|313114638|ref|ZP_07800145.1| ATPase, AAA family [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623041|gb|EFQ06489.1| ATPase, AAA family [Faecalibacterium cf. prausnitzii KLE1255]
Length = 730
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 176 LWHSEEQRKRRALEAC--SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKA 233
+W + + L A +E +DE+ EL+ +VGL +K + A + + +RR A
Sbjct: 442 VWFCLNDQPEQELSALLPAEYTGAVDEIRAELNGLVGLGAVKEYVFGLADNLQVQQRRAA 501
Query: 234 LGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGH 293
G K A HM F GNPGTGKT +AR++ + L +G L ++ EV R DLVG + GH
Sbjct: 502 AGFKT-ASLSMHMIFTGNPGTGKTTIARLVAKYLKAIGALKGGQLVEVTRADLVGRYTGH 560
Query: 294 TGPKT 298
T P T
Sbjct: 561 TAPLT 565
>gi|258539919|ref|YP_003174418.1| stage V sporulation protein K [Lactobacillus rhamnosus Lc 705]
gi|385835568|ref|YP_005873342.1| stage V sporulation protein K [Lactobacillus rhamnosus ATCC 8530]
gi|257151595|emb|CAR90567.1| Stage V sporulation protein K [Lactobacillus rhamnosus Lc 705]
gi|355395059|gb|AER64489.1| stage V sporulation protein K [Lactobacillus rhamnosus ATCC 8530]
Length = 852
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV-GARRPP-HMAFLG 250
E A +D L +L+ +VGL+ +K + K + +D+ AL K+ A +P HM F G
Sbjct: 579 EKAAAVDALLGQLNGMVGLNSVKAFVNDLVKQVKVDQ---ALQDKLPDATKPTYHMVFAG 635
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PGTGKT VAR++ +L Y +GILP D V+EV R DLVG+++G T KT + +
Sbjct: 636 PPGTGKTTVARLIAQLFYNLGILPKDTVSEVARPDLVGQYIGQTAQKTGKAI 687
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
++L ++GL +LK Q+ + K +++R A G K A+ H FLGNPGTGKT VAR+
Sbjct: 318 DQLHEMIGLTKLKKQVDTFIKVASFNQKRAAQGSKATAQSL-HSLFLGNPGTGKTTVARL 376
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+G+++Y G+LP++ EV R DLV + VG T +T++
Sbjct: 377 VGKIMYENGVLPSNNYVEVSREDLVSQNVGGTAVQTKK 414
>gi|229552546|ref|ZP_04441271.1| cbxX/cfqX family protein [Lactobacillus rhamnosus LMS2-1]
gi|229314098|gb|EEN80071.1| cbxX/cfqX family protein [Lactobacillus rhamnosus LMS2-1]
Length = 869
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 5/112 (4%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV-GARRPP-HMAFLG 250
E A +D L +L+ +VGL+ +K + K + +D+ AL K+ A +P HM F G
Sbjct: 596 EKAAAVDALLGQLNGMVGLNSVKAFVNDLVKQVKVDQ---ALQDKLPDATKPTYHMVFAG 652
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PGTGKT VAR++ +L Y +GILP D V+EV R DLVG+++G T KT + +
Sbjct: 653 PPGTGKTTVARLIAQLFYNLGILPKDTVSEVARPDLVGQYIGQTAQKTGKAI 704
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
++L ++GL +LK Q+ + K +++R A G K A+ H FLGNPGTGKT VAR+
Sbjct: 335 DQLHEMIGLTKLKKQVDTFIKVASFNQKRAAQGSKATAQSL-HSLFLGNPGTGKTTVARL 393
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+G+++Y G+LP++ EV R DLV + VG T +T++
Sbjct: 394 VGKIMYENGVLPSNNYVEVSREDLVSQNVGGTAVQTKK 431
>gi|319789292|ref|YP_004150925.1| Ankyrin [Thermovibrio ammonificans HB-1]
gi|317113794|gb|ADU96284.1| Ankyrin [Thermovibrio ammonificans HB-1]
Length = 236
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 89/179 (49%), Gaps = 14/179 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQ 81
+SGD + L+ ++ RN QTPL+ + + E K L+E N + A
Sbjct: 47 RSGDFKKAEELIASGRVPVDYRNK-FDQTPLYYAVDADNVEFAKFLIEHGAN----VNAT 101
Query: 82 NMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTL 141
+ +G TPLH A G AKLL+ HGA + A G TPLHL+ Y+ K L
Sbjct: 102 DYFGLTPLHEAVVRGSYRVAKLLIEHGAKVNATDKYGYTPLHLTAIYNRPR----LAKLL 157
Query: 142 LEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS-----EEQRKRRALEACSETK 195
+E+ AD +AKDN G TPL + + GS + ++LL + + R + L+ +E+K
Sbjct: 158 IEHGADVNAKDNYGNTPLHYCATTKGSEAVAKVLLENGANPNVKNNRGKTPLDLANESK 216
>gi|56419849|ref|YP_147167.1| spore formation protein [Geobacillus kaustophilus HTA426]
gi|261419520|ref|YP_003253202.1| stage V sporulation protein K [Geobacillus sp. Y412MC61]
gi|297530510|ref|YP_003671785.1| stage V sporulation protein K [Geobacillus sp. C56-T3]
gi|319766336|ref|YP_004131837.1| stage V sporulation protein K [Geobacillus sp. Y412MC52]
gi|375008292|ref|YP_004981925.1| stage V sporulation protein K [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448237469|ref|YP_007401527.1| stage V sporulation protein K [Geobacillus sp. GHH01]
gi|56379691|dbj|BAD75599.1| spore formation protein [Geobacillus kaustophilus HTA426]
gi|261375977|gb|ACX78720.1| stage V sporulation protein K [Geobacillus sp. Y412MC61]
gi|297253762|gb|ADI27208.1| stage V sporulation protein K [Geobacillus sp. C56-T3]
gi|317111202|gb|ADU93694.1| stage V sporulation protein K [Geobacillus sp. Y412MC52]
gi|359287141|gb|AEV18825.1| Stage V sporulation protein K [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445206311|gb|AGE21776.1| stage V sporulation protein K [Geobacillus sp. GHH01]
Length = 310
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
++ EL ++GL +K +++ + ++ RK GLK R+ HM F GNPGTGKT VA
Sbjct: 45 IQKELDQLIGLDHVKKIIKEIYAWLYINRLRKENGLKAN-RQALHMIFKGNPGTGKTTVA 103
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R+LG+L + + +L E +R DLVGE++GHT KTR
Sbjct: 104 RLLGKLFFEMNVLSKGHFIEAERADLVGEYIGHTASKTR 142
>gi|374709032|ref|ZP_09713466.1| stage V sporulation protein K [Sporolactobacillus inulinus CASD]
Length = 320
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+++LE++L +VG+ ++K+ +R+ + + +R+ + LKV ++ HM F GNPGTGKT
Sbjct: 40 LEKLEHKLDRLVGMDQVKLMVRELYAWLYVYRKRQEVQLKV-KKQSFHMLFKGNPGTGKT 98
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR+L L + + ILP ++ E +R DLVGE++G T KTR V L + +
Sbjct: 99 TVARLLSDLFHEMEILPKGQLIEAERADLVGEYIGQTAQKTRDLVKRALGGVLFI 153
>gi|342216765|ref|ZP_08709412.1| ATPase, AAA family [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587655|gb|EGS31055.1| ATPase, AAA family [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 394
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 71/125 (56%)
Query: 182 QRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGAR 241
Q R A E +A ++E +L +++GL +K ++RK + ++ R+ G+ +
Sbjct: 178 QEARTADHQAQEKEAGLEESLKKLDDLIGLEGVKKEIRKIVGQVQFEKNREQAGIINENK 237
Query: 242 RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
+ HMAF GNPGTGKT VAR+LG + +GIL + EV R+DLV ++G T KT+
Sbjct: 238 QSYHMAFYGNPGTGKTTVARLLGDIFKSLGILEKGHLVEVDRSDLVVGYIGQTATKTQET 297
Query: 302 VGHLL 306
+ L
Sbjct: 298 IEEAL 302
>gi|384539663|ref|YP_005723747.1| probabable CbbX protein [Sinorhizobium meliloti SM11]
gi|407724088|ref|YP_006843749.1| Protein CbbX [Sinorhizobium meliloti Rm41]
gi|336038316|gb|AEH84246.1| probabable CbbX protein [Sinorhizobium meliloti SM11]
gi|407324148|emb|CCM72749.1| Protein CbbX [Sinorhizobium meliloti Rm41]
Length = 311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ R+A+GL + PP HM+F GNPGTG
Sbjct: 32 LDELDREL---VGLKPVKQRIRETAALLLVERARRAMGL---SHEPPSLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|155122099|gb|ABT13967.1| hypothetical protein MT325_M413L [Paramecium bursaria chlorella
virus MT325]
Length = 333
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G L + LL+ + ++ N TPLHV+A + EIV+ LLE G D
Sbjct: 139 LHDMAWKGHLEIARLLLKHGADVCSKTND--GWTPLHVAALHGSLEIVRVLLE-HGTD-- 193
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ A+ G TPLH+AA +G E ++LL HGA + AK N+G+TPLH++
Sbjct: 194 -VGAKTKTGCTPLHLAALHGSLEIVRVLLEHGADVGAKNNDGLTPLHVAASRGC----LE 248
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSN 164
TV+ LLE+ A+ KDN KTP +HL +
Sbjct: 249 TVRLLLEHGANIRVKDNLFKTPFEHLED 276
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
RLL ++ + ++ +N + T LHV+A E+V+ LLE ++ ++ G PLH
Sbjct: 85 RLLLKHGANVDAKNNDVGWTLLHVAALEGHLEVVRLLLE----HGADVCSKTYDGWMPLH 140
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A G E A+LLL HGA + +K N+G TPLH++ + V+ LLE+ D A
Sbjct: 141 DMAWKGHLEIARLLLKHGADVCSKTNDGWTPLHVAALHG----SLEIVRVLLEHGTDVGA 196
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
K G TPL HL+ GS ++ +LL H +
Sbjct: 197 KTKTGCTPL-HLAALHGSLEIVRVLLEHGAD 226
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 27 LAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYG 85
L F L EN + + E PV LH++ + E V LL G D + A + YG
Sbjct: 21 LVFALLQHENANAIGEDGIPV-----LHMA----RNEDVARLLIEHGAD---VNANDTYG 68
Query: 86 ETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN-GMTPLHLSVWYSIRSEDYATVKTLLEY 144
TPLHMAA+ G E +LLL HGA ++AK N+ G T LH++ V+ LLE+
Sbjct: 69 RTPLHMAARQGYTEIVRLLLKHGANVDAKNNDVGWTLLHVAALEG----HLEVVRLLLEH 124
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSET 194
AD +K +G PL H G ++ LLL H + CS+T
Sbjct: 125 GADVCSKTYDGWMPL-HDMAWKGHLEIARLLLKHGA--------DVCSKT 165
>gi|384569034|gb|AFI09262.1| LmrCD-specific DARPin, partial [synthetic construct]
Length = 169
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 86/145 (59%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A + EIV+ LL++ ++ A +++G TPLH
Sbjct: 31 RILMANGADVNATD-YTGYTPLHLAAKWGHLEIVEVLLKYG----ADVNADDVFGNTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA +G E ++LL +GA + A +NG TPLHL+ + R E V+ LL+Y AD +A
Sbjct: 86 LAANHGHLEIVEVLLKYGADVNATDSNGTTPLHLAALHG-RLE---IVEVLLKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV-WYSIRSEDYATVKTLLEYNADCSA 150
AA+ G ++ ++L+A+GA + A G TPLHL+ W + V+ LL+Y AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDYTGYTPLHLAAKWGHLE-----IVEVLLKYGADVNA 75
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL + +
Sbjct: 76 DDVFGNTPL-HLAANHGHLEIVEVLLKYGAD 105
>gi|378763870|ref|YP_005192486.1| putative cbbX protein [Sinorhizobium fredii HH103]
gi|365183498|emb|CCF00347.1| putative cbbX protein [Sinorhizobium fredii HH103]
Length = 311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ R+A+GL + PP HM+F GNPGTG
Sbjct: 32 LDELDREL---VGLKPVKQRIRETAALLLVERARRAMGL---SHEPPSLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|2541885|dbj|BAA22821.1| CfxQ protein [Cyanidioschyzon merolae]
Length = 295
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ + +D+L+ EL +GL +K ++R+ A +L+D R+ LGL + P HM+F G
Sbjct: 21 TQIQEVLDDLDREL---IGLQTVKTRIREIAALLLVDRLRQKLGL--SSSNPGLHMSFTG 75
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+PGTGKT VAR + +LY +G + + V R DLVG+++GHT PKT++
Sbjct: 76 SPGTGKTTVARKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQ 125
>gi|374998623|ref|YP_004974122.1| ATP-binding protein (RuBisCO operon) [Azospirillum lipoferum 4B]
gi|357426048|emb|CBS88947.1| ATP-binding protein (RuBisCO operon) [Azospirillum lipoferum 4B]
Length = 314
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K ++R+ A +L++ R+++GL+ PP HM F GNPGTGKT VAR +
Sbjct: 52 LVGLLPVKTRIREIAALLLVERARRSIGLRA---EPPSLHMCFTGNPGTGKTTVARRMAG 108
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LL+ +G + D V V R DLVG+++GHT PKT+
Sbjct: 109 LLHGLGYIRRDHVVSVTRDDLVGQYIGHTAPKTK 142
>gi|30468060|ref|NP_848947.1| CfxQ protein homolog [Cyanidioschyzon merolae strain 10D]
gi|32172414|sp|O22025.2|CFXQ_CYAME RecName: Full=Protein cfxQ homolog
gi|30409160|dbj|BAC76109.1| CfxQ protein homolog (chloroplast) [Cyanidioschyzon merolae strain
10D]
Length = 293
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ + +D+L+ EL +GL +K ++R+ A +L+D R+ LGL + P HM+F G
Sbjct: 19 TQIQEVLDDLDREL---IGLQTVKTRIREIAALLLVDRLRQKLGL--SSSNPGLHMSFTG 73
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+PGTGKT VAR + +LY +G + + V R DLVG+++GHT PKT++
Sbjct: 74 SPGTGKTTVARKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQ 123
>gi|326389409|ref|ZP_08210976.1| stage V sporulation protein K [Thermoanaerobacter ethanolicus JW
200]
gi|392940981|ref|ZP_10306625.1| stage V sporulation protein K [Thermoanaerobacter siderophilus SR4]
gi|325994414|gb|EGD52839.1| stage V sporulation protein K [Thermoanaerobacter ethanolicus JW
200]
gi|392292731|gb|EIW01175.1| stage V sporulation protein K [Thermoanaerobacter siderophilus SR4]
Length = 303
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
K + + + K +E EL++++GL+++K +++ L +RK GL A P
Sbjct: 25 KPKEVTTTVDDKKLQEEALKELNSLIGLNKVKEIIQEIYAFSQLQIKRKKEGL---ATEP 81
Query: 244 P--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT + R
Sbjct: 82 IVLHMIFKGNPGTGKTTVARILGKLLKSIGVLEKGHVVEVERADLVGEYIGHTAHRVREN 141
Query: 302 VGHLLSEITCL 312
V L I +
Sbjct: 142 VKKALGGILFV 152
>gi|16263937|ref|NP_436729.1| CbbX protein [Sinorhizobium meliloti 1021]
gi|334319927|ref|YP_004556556.1| CbbX protein [Sinorhizobium meliloti AK83]
gi|384533912|ref|YP_005716576.1| CbbX protein [Sinorhizobium meliloti BL225C]
gi|433611640|ref|YP_007195101.1| putative Rubsico expression protein CbbX [Sinorhizobium meliloti
GR4]
gi|15140061|emb|CAC48589.1| probable CbbX protein [Sinorhizobium meliloti 1021]
gi|333816088|gb|AEG08755.1| CbbX protein [Sinorhizobium meliloti BL225C]
gi|334097666|gb|AEG55676.1| CbbX protein [Sinorhizobium meliloti AK83]
gi|429556582|gb|AGA11502.1| putative Rubsico expression protein CbbX [Sinorhizobium meliloti
GR4]
Length = 311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ R+A+GL + PP HM+F GNPGTG
Sbjct: 32 LDELDREL---VGLKPVKQRIRETAALLLVERARRAMGL---SHEPPSLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|406577186|ref|ZP_11052803.1| ATPase AAA [Streptococcus sp. GMD6S]
gi|419814853|ref|ZP_14339592.1| ATPase AAA [Streptococcus sp. GMD2S]
gi|419818048|ref|ZP_14342161.1| ATPase AAA [Streptococcus sp. GMD4S]
gi|404460274|gb|EKA06547.1| ATPase AAA [Streptococcus sp. GMD6S]
gi|404465116|gb|EKA10620.1| ATPase AAA [Streptococcus sp. GMD4S]
gi|404470784|gb|EKA15377.1| ATPase AAA [Streptococcus sp. GMD2S]
Length = 361
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
L N+L +++GL +K ++ + + R+ +GLK R HMAFLGNPGTGKT VA
Sbjct: 99 LANDLKSLIGLENVKKEIEDLVAFNKVQQSREKIGLK-KTNRTMHMAFLGNPGTGKTTVA 157
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
RI+G + +GIL E RTDL+ E+ G T K +R +
Sbjct: 158 RIVGNMYRSLGILSKGHFIEASRTDLIAEYQGQTASKVKRLI 199
>gi|295697416|ref|YP_003590654.1| CbbX protein [Kyrpidia tusciae DSM 2912]
gi|295413018|gb|ADG07510.1| CbbX protein [Kyrpidia tusciae DSM 2912]
Length = 298
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 10/105 (9%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGT 254
+D+L+ EL VGL +K ++R+ A +L+D RK +GLK PP HM+F GNPGT
Sbjct: 24 LDQLDREL---VGLRPVKTKIREIAALLLVDRMRKQVGLKT----PPPSLHMSFTGNPGT 76
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 77 GKTTVALRMADILHRLGYVRKGHMVAVTRDDLVGQYIGHTAPKTK 121
>gi|345017675|ref|YP_004820028.1| stage V sporulation protein K [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033018|gb|AEM78744.1| stage V sporulation protein K [Thermoanaerobacter wiegelii Rt8.B1]
Length = 303
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
K + + + K +E EL++++GL+++K +++ L +RK GL A P
Sbjct: 25 KPKEVTTTVDDKKLQEEALKELNSLIGLNKVKEIIQEIYAFSQLQIKRKKEGL---ATEP 81
Query: 244 P--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT + R
Sbjct: 82 IVLHMIFKGNPGTGKTTVARILGKLLKSIGVLEKGHVVEVERADLVGEYIGHTAHRVREN 141
Query: 302 VGHLLSEITCL 312
V L I +
Sbjct: 142 VKKALGGILFV 152
>gi|188586127|ref|YP_001917672.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350814|gb|ACB85084.1| AAA ATPase central domain protein [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 321
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
N++ +VGL ++K + + + + +R+ L L V ++ HM F+G+PGTGKT VARI
Sbjct: 57 NKMERLVGLEKVKRNIYEICAYIAIQNKRQQLNLSVESQ-TLHMLFMGSPGTGKTTVARI 115
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
LG + + LP+ + EV+R DLVGE++G T KT++++ + L I +
Sbjct: 116 LGEIFKELDYLPSGHLVEVERADLVGEYIGQTAQKTKKQIDNALGGILFI 165
>gi|406587834|ref|ZP_11062643.1| ATPase AAA [Streptococcus sp. GMD1S]
gi|404471856|gb|EKA16323.1| ATPase AAA [Streptococcus sp. GMD1S]
Length = 353
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
L N+L +++GL +K ++ + + R+ +GLK R HMAFLGNPGTGKT VA
Sbjct: 91 LANDLKSLIGLENVKKEIEDLVAFNKVQQSREKIGLK-KTNRTMHMAFLGNPGTGKTTVA 149
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
RI+G + +GIL E RTDL+ E+ G T K +R +
Sbjct: 150 RIVGNMYRSLGILSKGHFIEASRTDLIAEYQGQTASKVKRLI 191
>gi|320526776|ref|ZP_08027966.1| ATPase, AAA family [Solobacterium moorei F0204]
gi|320132744|gb|EFW25284.1| ATPase, AAA family [Solobacterium moorei F0204]
Length = 714
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+++E+ ELS I+GL E+K + + + ++R+ G+K A HM F GNPGTGK
Sbjct: 427 ELEEVNRELSEIIGLDEVKAYITSLQSLVAMQQKRREQGMKT-ATLSKHMIFTGNPGTGK 485
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T +AR++ R + +G L ++ EV R+DLV ++VG T P T
Sbjct: 486 TTIARLISRYMKAIGALTQGQLVEVSRSDLVAQYVGQTAPLT 527
>gi|258511533|ref|YP_003184967.1| AAA ATPase [Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478259|gb|ACV58578.1| AAA ATPase central domain protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 329
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNP 252
K ++ EL EL ++VGL E+K +R+ + + R+ LK P HM F GNP
Sbjct: 56 KRRIHELLRELDDLVGLDEVKRVVREIFALVYVQRLRREHRLKAD---PTVLHMIFYGNP 112
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
GTGKT VARIL R+ + G+L + EV+R DLVGE++GHT KTR ++ L + +
Sbjct: 113 GTGKTTVARILARMFHECGLLEKGHLVEVERADLVGEYIGHTAQKTREQIQKALGGVLFI 172
>gi|150376073|ref|YP_001312669.1| protein CbxX/CfqX [Sinorhizobium medicae WSM419]
gi|150030620|gb|ABR62736.1| CbxX/CfqX monofunctional [Sinorhizobium medicae WSM419]
Length = 311
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ R+A+GL + PP HM+F GNPGTG
Sbjct: 32 LDELDREL---VGLKPVKQRIRETAALLLVERARRAMGL---SHEPPSLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|365127974|ref|ZP_09340322.1| hypothetical protein HMPREF1032_02086 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363623553|gb|EHL74664.1| hypothetical protein HMPREF1032_02086 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 768
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ +++ ++ EL IVGL +K + + RRKA GLK A HM F GNPGT
Sbjct: 497 QGEVEAVKAELDVIVGLAAVKEYVLSLEDNFAVQARRKAAGLKT-ASVSMHMIFTGNPGT 555
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLTF 314
GKT +AR++ R L +G+L ++ EV R DLVG +VGHT P T + L S + + F
Sbjct: 556 GKTTIARLVSRYLKAIGVLSGGQLVEVTRADLVGRYVGHTAPLTTQ---VLKSAVGGVLF 612
Query: 315 I 315
I
Sbjct: 613 I 613
>gi|354557455|ref|ZP_08976713.1| AAA ATPase central domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550249|gb|EHC19686.1| AAA ATPase central domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 325
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 81/148 (54%), Gaps = 4/148 (2%)
Query: 158 PLDHLSNGPGSAKLRELLLWHSE---EQRKRRALEACSETKAKMDELENELSNIVGLHEL 214
P DHL S K + L SE + K R + S K K++E+ +EL ++GL ++
Sbjct: 9 PDDHLPPVVHSPKPKVALESQSEPTVQNSKFRKTISNSTDKDKVEEILSELDALIGLRKV 68
Query: 215 KIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILP 274
K +R+ + + RR L + HM F GNPGTGKT VAR++GRL + +L
Sbjct: 69 KELVRELQAYVEIQRRRTREKL-LAESLVLHMIFRGNPGTGKTTVARLIGRLFKEMEVLQ 127
Query: 275 TDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ E +R DLVGE++GHT KTR +V
Sbjct: 128 KGHIIECERADLVGEYIGHTAQKTREQV 155
>gi|167037594|ref|YP_001665172.1| ATPase central domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116009|ref|YP_004186168.1| stage V sporulation protein K [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856428|gb|ABY94836.1| AAA ATPase, central domain protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929100|gb|ADV79785.1| stage V sporulation protein K [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 298
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
K + + + K +E EL++++GL+++K +++ L +RK GL A P
Sbjct: 20 KPKEVTTTVDDKKLQEEALKELNSLIGLNKVKEIIQEIYAFSQLQIKRKKEGL---ATEP 76
Query: 244 P--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT + R
Sbjct: 77 IVLHMIFKGNPGTGKTTVARILGKLLKSIGVLEKGHVVEVERADLVGEYIGHTAHRVREN 136
Query: 302 VGHLLSEITCL 312
V L I +
Sbjct: 137 VKKALGGILFV 147
>gi|167040256|ref|YP_001663241.1| ATPase central domain-containing protein [Thermoanaerobacter sp.
X514]
gi|256750820|ref|ZP_05491705.1| stage V sporulation protein K [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914340|ref|ZP_07131656.1| stage V sporulation protein K [Thermoanaerobacter sp. X561]
gi|307724424|ref|YP_003904175.1| stage V sporulation protein K [Thermoanaerobacter sp. X513]
gi|166854496|gb|ABY92905.1| AAA ATPase, central domain protein [Thermoanaerobacter sp. X514]
gi|256750403|gb|EEU63422.1| stage V sporulation protein K [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889275|gb|EFK84421.1| stage V sporulation protein K [Thermoanaerobacter sp. X561]
gi|307581485|gb|ADN54884.1| stage V sporulation protein K [Thermoanaerobacter sp. X513]
Length = 298
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
K + + + K +E EL++++GL+++K +++ L +RK GL A P
Sbjct: 20 KPKEVTTTVDDKKLQEEALKELNSLIGLNKVKEIIQEIYAFSQLQIKRKKEGL---ATEP 76
Query: 244 P--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT + R
Sbjct: 77 IVLHMIFKGNPGTGKTTVARILGKLLKSIGVLEKGHVVEVERADLVGEYIGHTAHRVREN 136
Query: 302 VGHLLSEITCL 312
V L I +
Sbjct: 137 VKKALGGILFV 147
>gi|220932000|ref|YP_002508908.1| ATPase AAA [Halothermothrix orenii H 168]
gi|219993310|gb|ACL69913.1| AAA ATPase central domain protein [Halothermothrix orenii H 168]
Length = 348
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 5/135 (3%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
+E+ K A + K ++++ ++ +VGL +K ++++ + + + R+ GLK
Sbjct: 51 DEKNKDTAGNSLPFNKTNVEKVLKDMDKLVGLTRIKKLVKEYISFIQVQKMREQYGLKT- 109
Query: 240 ARRPP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
P HM F GNPGTGKT +AR+LGR+ +G+L T + EV+R DLVGE++GHT K
Sbjct: 110 --EPVVMHMIFKGNPGTGKTTMARLLGRVFKELGLLETGDLIEVERADLVGEYIGHTAQK 167
Query: 298 TRRRVGHLLSEITCL 312
T++ + L I +
Sbjct: 168 TKKVIQKALGGILFI 182
>gi|383759456|ref|YP_005438441.1| rubisco accessory protein CbbX, AAA ATPase [Rubrivivax gelatinosus
IL144]
gi|381380125|dbj|BAL96942.1| rubisco accessory protein CbbX, AAA ATPase [Rubrivivax gelatinosus
IL144]
Length = 316
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAF 248
A S+ +A MDELE++L VGL +K ++R A +++D+ R LGL A+ P HM F
Sbjct: 36 AQSQVEAVMDELEHDL---VGLAPVKQRIRDIAALLVIDKLRLNLGL--AAQMPSLHMCF 90
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 91 TGNPGTGKTTVALRMAEILHRLGYVRKGHLVAVTRDDLVGQYIGHTAPKTK 141
>gi|374991999|ref|YP_004967494.1| sporulation protein K [Streptomyces bingchenggensis BCW-1]
gi|297162651|gb|ADI12363.1| sporulation protein K [Streptomyces bingchenggensis BCW-1]
Length = 931
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 7/95 (7%)
Query: 209 VGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTMVARILGR 265
VGL +K + K M +RR++ GL PP H+ F GNPGTGKT VAR+ GR
Sbjct: 670 VGLARVKQDVASLVKLMRTVQRRESAGLAA----PPLSRHLVFAGNPGTGKTTVARLYGR 725
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+L VG+L + E R+ LVGE+VGHTGPKT+R
Sbjct: 726 ILAAVGLLERGHLVEADRSSLVGEYVGHTGPKTQR 760
>gi|289578359|ref|YP_003476986.1| stage V sporulation protein K [Thermoanaerobacter italicus Ab9]
gi|297544636|ref|YP_003676938.1| stage V sporulation protein K [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528072|gb|ADD02424.1| stage V sporulation protein K [Thermoanaerobacter italicus Ab9]
gi|296842411|gb|ADH60927.1| stage V sporulation protein K [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 298
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
K + + + K +E EL++++GL+++K +++ L +RK GL A P
Sbjct: 20 KPKEVTTTVDDKKLQEEALKELNSLIGLNKVKEIIQEIYAFSQLQIKRKKEGL---ATEP 76
Query: 244 P--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT + R
Sbjct: 77 IVLHMIFKGNPGTGKTTVARILGKLLKSIGVLEKGHVVEVERADLVGEYIGHTAHRVREN 136
Query: 302 VGHLLSEITCL 312
V L I +
Sbjct: 137 VKKALGGILFV 147
>gi|329770145|ref|ZP_08261537.1| hypothetical protein HMPREF0433_01301 [Gemella sanguinis M325]
gi|328837161|gb|EGF86801.1| hypothetical protein HMPREF0433_01301 [Gemella sanguinis M325]
Length = 640
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L ++GL ++K ++R++ +++ R+ GL+ A H FLGNPGTGKT VAR++
Sbjct: 385 KLDEMIGLTKVKSEVREFIALAQMNKLRREKGLE-DAPLTLHSLFLGNPGTGKTTVARLI 443
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G++LY G++ +D E R+DLVG+++GHT +TR
Sbjct: 444 GKILYQKGLIKSDNFVETSRSDLVGKYIGHTAKQTR 479
>gi|239826719|ref|YP_002949343.1| stage V sporulation protein K [Geobacillus sp. WCH70]
gi|239807012|gb|ACS24077.1| stage V sporulation protein K [Geobacillus sp. WCH70]
Length = 310
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +++ EL ++GL +K +++ + +++ RK GLK ++ HM F GNPGTGKT
Sbjct: 42 LKDIQKELDQLIGLDHVKKIIKEIYAWLYINKVRKENGLK-SNKQALHMIFKGNPGTGKT 100
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+LG+L + + +L E +R DLVGE++GHT KTR
Sbjct: 101 TVARLLGKLFFEMNVLSKGHFIEAERADLVGEYIGHTANKTR 142
>gi|332528011|ref|ZP_08404045.1| AAA type ATPase [Rubrivivax benzoatilyticus JA2]
gi|332112585|gb|EGJ12378.1| AAA type ATPase [Rubrivivax benzoatilyticus JA2]
Length = 317
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAF 248
A S+ +A MDELE++L VGL +K ++R A +++D+ R LGL A+ P HM F
Sbjct: 37 AQSQVEAVMDELEHDL---VGLAPVKQRIRDIAALLVIDKLRLNLGL--AAQMPSLHMCF 91
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 92 TGNPGTGKTTVALRMAEILHRLGYVRKGHLVAVTRDDLVGQYIGHTAPKTK 142
>gi|121533672|ref|ZP_01665499.1| AAA ATPase, central domain protein [Thermosinus carboxydivorans
Nor1]
gi|121307663|gb|EAX48578.1| AAA ATPase, central domain protein [Thermosinus carboxydivorans
Nor1]
Length = 315
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+++E+ EL +++GL E+K +R+ + + +RR+ L + HM F GNPGTGK
Sbjct: 48 RVEEIMRELDSLIGLSEVKKLVREINAFIEIQKRREKEHL-ITDPLVLHMIFKGNPGTGK 106
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VARILG++ +G+L + EV+R DLVGE++GHT KTR ++
Sbjct: 107 TTVARILGKIFREMGVLSRGHLIEVERADLVGEYIGHTAQKTREQL 152
>gi|239816005|ref|YP_002944915.1| CbbX protein [Variovorax paradoxus S110]
gi|239802582|gb|ACS19649.1| CbbX protein [Variovorax paradoxus S110]
Length = 310
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 71/116 (61%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
R L S KA +D+L+ EL +GL +K ++R A +L+D+ R+ GL+ +PP
Sbjct: 18 RQLFESSGVKALLDQLDAEL---IGLAPVKGRIRDIAALLLIDKLRQEQGLQ---SQPPS 71
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L +G + + V R DLVG+F+GHT PKT+
Sbjct: 72 LHMSFTGNPGTGKTTVAMRMAEVLKQLGYVRKGHLVAVTRDDLVGQFIGHTAPKTK 127
>gi|333978778|ref|YP_004516723.1| stage V sporulation protein K [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822259|gb|AEG14922.1| stage V sporulation protein K [Desulfotomaculum kuznetsovii DSM
6115]
Length = 320
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKT 257
E+ EL ++VGL +K + + + + RR+ L A P HM F GNPGTGKT
Sbjct: 50 EIMKELDSLVGLAGVKKLVGEIHAFVEIQRRRQREKL---ATEPQVLHMVFKGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VARI+GRL VG+LP + EV+R DLVGE++GHT KTR ++ L I +
Sbjct: 107 TVARIIGRLFKEVGVLPKGHLVEVERADLVGEYIGHTAQKTRDQIKKALGGILFI 161
>gi|288929954|ref|ZP_06423796.1| stage V sporulation protein K [Prevotella sp. oral taxon 317 str.
F0108]
gi|288328773|gb|EFC67362.1| stage V sporulation protein K [Prevotella sp. oral taxon 317 str.
F0108]
Length = 292
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
ET+ +DEL N+L ++VGL +K ++ + + R LGL + H+AF GNP
Sbjct: 22 ETEKTLDELLNDLDHLVGLDNVKSKVSDLICFQKVQKLRNGLGLS-SPKSTLHLAFTGNP 80
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GTGKT VARI+GRL +GIL EV RTDL+ F G T K + +
Sbjct: 81 GTGKTTVARIVGRLYKQIGILSKGHFVEVSRTDLIAGFQGQTAHKVKHVI 130
>gi|448926939|gb|AGE50514.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus CVA-1]
Length = 333
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G L + LL+ + ++ N TPLH +A + EIV+ LLE
Sbjct: 139 LHDMAWKGHLEIARLLLKHGADVCSKTND--GWTPLHAAALHWSLEIVRVLLE----HGA 192
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A+ G TPLH+AA +G E ++LL HGA I AK N+G TPLH++ + R E
Sbjct: 193 DVGAKTKTGCTPLHLAAWHGSLEIVRVLLEHGADIGAKNNDGSTPLHVAASHG-RLE--- 248
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSN 164
TV+ LLE+ AD KDN KTP +HL +
Sbjct: 249 TVRLLLEHGADIRVKDNLFKTPFEHLED 276
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G + LL+ ++ E N V T LHV+A E+V+ LLE
Sbjct: 72 LHMAARQGYTEIVRLLLKHGANVGAENNDV-GWTLLHVAALEGHLEVVRLLLE----HGA 126
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ ++ G PLH A G E A+LLL HGA + +K N+G TPLH + +
Sbjct: 127 DVCSKTYDGWMPLHDMAWKGHLEIARLLLKHGADVCSKTNDGWTPLHAAALHW----SLE 182
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
V+ LLE+ AD AK G TPL HL+ GS ++ +LL H +
Sbjct: 183 IVRVLLEHGADVGAKTKTGCTPL-HLAAWHGSLEIVRVLLEHGAD 226
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 9/151 (5%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
RLL E+ + +N N +TPLH++A EIV+ LL+ N E N G T LH
Sbjct: 52 RLLIEHGADVNA-NDTYGRTPLHMAARQGYTEIVRLLLKHGANVGAE---NNDVGWTLLH 107
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E +LLL HGA + +K +G PLH W + LL++ AD +
Sbjct: 108 VAALEGHLEVVRLLLEHGADVCSKTYDGWMPLHDMAWKG----HLEIARLLLKHGADVCS 163
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
K N+G TPL H + S ++ +LL H +
Sbjct: 164 KTNDGWTPL-HAAALHWSLEIVRVLLEHGAD 193
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 79 EAQNMYGET---PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
E N+ GE LHMA + A+LL+ HGA + A G TPLH++ R
Sbjct: 29 ENANVIGEDGIPVLHMARNE---DVARLLIEHGADVNANDTYGRTPLHMAA----RQGYT 81
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSET 194
V+ LL++ A+ A++N+ L H++ G ++ LLL H + CS+T
Sbjct: 82 EIVRLLLKHGANVGAENNDVGWTLLHVAALEGHLEVVRLLLEHGA--------DVCSKT 132
>gi|325983489|ref|YP_004295891.1| CbbX protein [Nitrosomonas sp. AL212]
gi|325533008|gb|ADZ27729.1| CbbX protein [Nitrosomonas sp. AL212]
Length = 313
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D RK LGL GA P HM F GNPGTGK
Sbjct: 31 LDKLDREL---IGLIPVKTRIRETAALLLVDRVRKQLGLSAGA--PSLHMCFTGNPGTGK 85
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 TTVALRMAEILHRLGYVREGHLVSVTRDDLVGQYIGHTAPKTK 128
>gi|156341294|ref|XP_001620716.1| hypothetical protein NEMVEDRAFT_v1g62711 [Nematostella vectensis]
gi|156205968|gb|EDO28616.1| predicted protein [Nematostella vectensis]
Length = 172
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)
Query: 214 LKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGIL 273
LK Q+ +WAK ++ D R GLK A+ HM F+GNPGTGKT +AR++ +L+ G++
Sbjct: 2 LKEQILRWAKSVVADNMRAKRGLK-KAKETYHMMFVGNPGTGKTTMARMMAGILHEAGVI 60
Query: 274 PTDRVTEVQRTDLVGEFVGHTGPKTR 299
++V EVQRT LVG ++G TG KT+
Sbjct: 61 KRNKVIEVQRTALVGRYIGETGTKTK 86
>gi|379729841|ref|YP_005322037.1| stage V sporulation protein K [Saprospira grandis str. Lewin]
gi|378575452|gb|AFC24453.1| stage V sporulation protein K [Saprospira grandis str. Lewin]
Length = 875
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
K +E EL+ ++GL +K Q+ + A + + RK G K A H F+GNPGT
Sbjct: 295 KLSYEEAVAELNALIGLESVKQQIDELATYLKFIQIRKEKGFKENAAINLHTVFMGNPGT 354
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VA++LG++ +G+L +V EV R DLVGE++G T PK ++ +
Sbjct: 355 GKTTVAKMLGQIYASLGLLSKGQVHEVGRVDLVGEYIGQTAPKVKKAI 402
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E NEL ++VGL ++K + + AK L +G V H F+GNPGTGKT
Sbjct: 590 LQEALNELHSLVGLEDVKRDVDEVAK---LVRYYTEIGRDVKKAFSLHTVFVGNPGTGKT 646
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV------GHLLSEITC 311
VARIL ++ +G+L + E R DLV + G T KT + G + E
Sbjct: 647 TVARILVKIYKALGVLERGHLVETDRKDLVAGYTGQTAIKTDEAIEKAMGGGLFIDEAYA 706
Query: 312 LT 313
LT
Sbjct: 707 LT 708
>gi|113477661|ref|YP_723722.1| AAA ATPase [Trichodesmium erythraeum IMS101]
gi|110168709|gb|ABG53249.1| AAA ATPase, central region [Trichodesmium erythraeum IMS101]
Length = 846
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
+A + + +L EL N +GL+ +K +R+ L +++ +A GL G HM F
Sbjct: 565 QAGGSKEENLADLLEELENKIGLNSVKSAIREIVNNQLANQQLEAAGLPAGGTETLHMIF 624
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GNPGTGKT VAR++G++ +G+L TEV R DLV E+VG T KT
Sbjct: 625 SGNPGTGKTTVARLVGKIFKALGLLRQGHFTEVVRRDLVAEYVGQTAIKT 674
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 15/155 (9%)
Query: 168 SAKLRELLLWH-----SEE-----QRKRRALEACSETKAKMDELENELSNIVGLHELKIQ 217
+A+ R L W+ SEE R++ L T+ ++ LE ++GL +K +
Sbjct: 263 AAENRSLNYWYDRYLTSEEISLTQARQQNWLSGNISTQPALERLEQ----MIGLQTVKDK 318
Query: 218 LRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDR 277
+R W + + ++ R+ GL + R H+ F GNPGTGKT VAR++G + +G+L
Sbjct: 319 IRGWMRKLEVESDRQRQGLTQESPRL-HLVFKGNPGTGKTTVARLIGEIYRDLGLLARGH 377
Query: 278 VTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
V EV R DLV +VG T +T V L + +
Sbjct: 378 VREVARGDLVAGYVGQTAIQTNEAVDDALDGVLFI 412
>gi|424842386|ref|ZP_18267011.1| AAA+ family ATPase [Saprospira grandis DSM 2844]
gi|395320584|gb|EJF53505.1| AAA+ family ATPase [Saprospira grandis DSM 2844]
Length = 875
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 65/108 (60%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
K +E EL+ ++GL +K Q+ + A + + RK G K A H F+GNPGT
Sbjct: 295 KLSYEEAVAELNALIGLESVKQQIDELATYLKFIQIRKEKGFKENAAINLHTVFMGNPGT 354
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VA++LG++ +G+L +V EV R DLVGE++G T PK ++ +
Sbjct: 355 GKTTVAKMLGQIYASLGLLSKGQVHEVGRVDLVGEYIGQTAPKVKKAI 402
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E NEL ++VGL ++K + + AK L +G V H F+GNPGTGKT
Sbjct: 590 LQEALNELHSLVGLEDVKRDVDEVAK---LVRYYTEIGRDVKKAFSLHTVFVGNPGTGKT 646
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV------GHLLSEITC 311
VARIL ++ +G+L + E R DLV + G T KT + G + E
Sbjct: 647 TVARILVKIYKALGVLERGHLVETDRKDLVAGYTGQTAIKTDEAIEKAMGGGLFIDEAYA 706
Query: 312 LT 313
LT
Sbjct: 707 LT 708
>gi|418400994|ref|ZP_12974529.1| CbbX protein [Sinorhizobium meliloti CCNWSX0020]
gi|359505101|gb|EHK77628.1| CbbX protein [Sinorhizobium meliloti CCNWSX0020]
Length = 311
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ R+A+GL + PP HM+F GNPGTG
Sbjct: 32 LDELDLEL---VGLKPVKQRIRETAALLLVERARRAMGL---SHEPPSLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|375103562|ref|ZP_09749823.1| putative Rubsico expression protein CbbX [Burkholderiales bacterium
JOSHI_001]
gi|374664293|gb|EHR69078.1| putative Rubsico expression protein CbbX [Burkholderiales bacterium
JOSHI_001]
Length = 321
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 84/144 (58%), Gaps = 15/144 (10%)
Query: 157 TPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKI 216
TP+ +S P A ++ R + A S+ +A ++ELE++L VGL +K
Sbjct: 15 TPVAPVSTPPDGA---------GQQPRTVGEVLAQSQVEAVLNELEHDL---VGLAPVKQ 62
Query: 217 QLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGRLLYMVGILPT 275
++R A +++D+ R A+GL+ A+ P HM F GNPGTGKT VA + +L+ +G +
Sbjct: 63 RIRDIAALLVIDKLRLAMGLQ--AQSPSLHMCFTGNPGTGKTTVALRMAEILHRLGYVRK 120
Query: 276 DRVTEVQRTDLVGEFVGHTGPKTR 299
+ V R DLVG+++GHT PKT+
Sbjct: 121 GHLVAVTRDDLVGQYIGHTAPKTK 144
>gi|402850953|ref|ZP_10899138.1| putative RuBisCo-expression protein CbbX [Rhodovulum sp. PH10]
gi|402498811|gb|EJW10538.1| putative RuBisCo-expression protein CbbX [Rhodovulum sp. PH10]
Length = 324
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 73/118 (61%), Gaps = 7/118 (5%)
Query: 185 RRALEACSETKAKMDELENELSN-IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
R L+A S ++DE+ EL N ++GL +K ++R+ A +L+D+ R+ GL P
Sbjct: 40 RVDLKALSH-DTQIDEVLTELDNALIGLKPVKRRIREIAAYLLVDKARRLQGLTAN---P 95
Query: 244 P--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
P HMAF GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 96 PTLHMAFTGNPGTGKTTVALRMASILHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 153
>gi|345858089|ref|ZP_08810502.1| ATPase associated with various cellular activities family protein
[Desulfosporosinus sp. OT]
gi|344328894|gb|EGW40259.1| ATPase associated with various cellular activities family protein
[Desulfosporosinus sp. OT]
Length = 324
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RK + + + K K+ E+ +EL + GL +K +R + + +RR L +
Sbjct: 42 RKNNNVSSLEKDKDKIKEILDELESFTGLVTVKRLIRDLQAFVEIQKRRTQEKL-IAEPL 100
Query: 243 PPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
HM F GNPGTGKT VAR++GRLL +G+L V E +R DLVGE++GHT KTR ++
Sbjct: 101 VLHMIFRGNPGTGKTTVARLVGRLLKEMGVLQKGHVIECERADLVGEYIGHTAQKTREQL 160
>gi|387879014|ref|YP_006309317.1| CbxX/CfqX family protein [Streptococcus parasanguinis FW213]
gi|386792469|gb|AFJ25504.1| cbxX/cfqX family protein [Streptococcus parasanguinis FW213]
Length = 621
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL--KVGARRPPHMAFLGNPGTGKTMV 259
E +LS ++GL E+KI L + + R+A G ++ R H+ F GNPGTGKT+V
Sbjct: 339 EKKLSELIGLEEVKIVLNQQLAYNRVSALRQAHGFSNEISNR---HLIFSGNPGTGKTVV 395
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
AR+ +LY I+ +++ EV RTDLVGE+VG T PK R+
Sbjct: 396 ARLFSEILYNNKIIQENKLVEVGRTDLVGEYVGQTAPKVRK 436
>gi|383755090|ref|YP_005433993.1| putative sporulation protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381367142|dbj|BAL83970.1| putative sporulation protein [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 892
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L+ L+ ++GL E+K +R + + RK GLK + HM F GNPGTGKTM+
Sbjct: 629 DLDKRLAEVIGLDEVKKYIRSLNARIKIQNMRKHAGLKTDNTQTLHMIFAGNPGTGKTMM 688
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR + +LY + ++ T+++ E R+ LV +VG T KTRR +
Sbjct: 689 ARTVADVLYNLNVIQTNKLIETDRSGLVAGYVGQTALKTRRVI 731
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+++E+ EL+ +VGL ++K + + + + R GLK HM F GNPGTGK
Sbjct: 359 ELEEVRQELAQVVGLDQVKEYVLSLENNLKVQQLRAGKGLK-STNLSMHMIFAGNPGTGK 417
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T +ARI+ + L +G+L + + EV R DLVG++ GHT KT
Sbjct: 418 TTIARIVAKYLKAIGVLSSGHLCEVTRADLVGQYAGHTAIKT 459
>gi|317969548|ref|ZP_07970938.1| cbbX protein [Synechococcus sp. CB0205]
Length = 310
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
+E + +D+L+ EL +GL +K ++R+ A +++D RK +GL A P HM+F G
Sbjct: 21 AEVQEVLDQLDQEL---IGLQPVKTRIREIAALLVVDRARKQVGLSTTA--PSLHMSFTG 75
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + ++L+ +G + V R DLVG+++GHT PKTR
Sbjct: 76 RPGTGKTTVAERMSQILHKLGYVRKGHVVTATRDDLVGQYIGHTAPKTR 124
>gi|403746477|ref|ZP_10955010.1| AAA ATPase central domain-containing protein [Alicyclobacillus
hesperidum URH17-3-68]
gi|403120808|gb|EJY55162.1| AAA ATPase central domain-containing protein [Alicyclobacillus
hesperidum URH17-3-68]
Length = 284
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNP 252
K ++ L EL ++GL E+K +R+ + + + R LK P HM F GNP
Sbjct: 93 KERLQSLLAELDELIGLDEVKRVVREIFAFVYIQQLRTRQHLKA---EPVVLHMVFFGNP 149
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VARIL RL + G+L + EV+R DLVGE++GHT KTR
Sbjct: 150 GTGKTTVARILARLFHECGLLAEGHLVEVERADLVGEYIGHTAQKTR 196
>gi|124266673|ref|YP_001020677.1| AAA type ATPase [Methylibium petroleiphilum PM1]
gi|124259448|gb|ABM94442.1| AAA type ATPase [Methylibium petroleiphilum PM1]
Length = 318
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAF 248
A S+ +A +DEL+ +L +GL +K ++R A +++D+ R LGL A+ P HM+F
Sbjct: 36 ADSQVEAVLDELDRDL---IGLAPVKQRIRDIAALLVIDKLRLNLGL--AAQSPSLHMSF 90
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 91 TGNPGTGKTTVAMRMAEILHRLGYVRKGHLVAVTRDDLVGQYIGHTAPKTK 141
>gi|410458691|ref|ZP_11312448.1| stage V sporulation protein K [Bacillus azotoformans LMG 9581]
gi|409931041|gb|EKN68029.1| stage V sporulation protein K [Bacillus azotoformans LMG 9581]
Length = 316
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+E E+S +VG+ E+K +++ + +++ R+ GL+ G++ HM F GNPGTGKT VA
Sbjct: 50 IEAEMSVLVGMEEMKKIIKEIYAWIYINKVREEHGLQAGSQ-VLHMLFKGNPGTGKTTVA 108
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R++G+LL + L + E +R DLVGE++GHT KTR
Sbjct: 109 RLIGKLLKEMNALSKGHLIEAERADLVGEYIGHTAQKTR 147
>gi|315646582|ref|ZP_07899700.1| AAA ATPase central domain protein [Paenibacillus vortex V453]
gi|315278225|gb|EFU41545.1| AAA ATPase central domain protein [Paenibacillus vortex V453]
Length = 327
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
E++ EL +VGL ++K + + + + + R GL G HM F GNPGTGKT
Sbjct: 54 FQEIQKELDQLVGLDQIKDLVFEIYALLQVSQMRSEAGLLSGGHVY-HMIFKGNPGTGKT 112
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VARI+ +L +G+L + EV+R DLVGE++GHT KTR V L I +
Sbjct: 113 TVARIVAKLFQKMGVLSKGHLVEVERADLVGEYIGHTAQKTRELVKKALGGILFI 167
>gi|334132391|ref|ZP_08506148.1| Protein cbxX, chromosomal AAA type ATPase [Methyloversatilis
universalis FAM5]
gi|333442357|gb|EGK70327.1| Protein cbxX, chromosomal AAA type ATPase [Methyloversatilis
universalis FAM5]
Length = 310
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA+ A S +A +++L+ EL VGL +K ++R A +L+D R GL+ +PP
Sbjct: 21 RAMFASSGVQALLEQLDAEL---VGLAPVKGRIRDIAALLLIDRLRAQQGLQ---SQPPS 74
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VA + +L +G + + V R DLVG+F+GHT PKT+
Sbjct: 75 LHMCFTGNPGTGKTTVALRMAEVLRQLGYVRKGHLVAVTRDDLVGQFIGHTAPKTK 130
>gi|257437492|ref|ZP_05613247.1| stage V sporulation protein K [Faecalibacterium prausnitzii A2-165]
gi|257200060|gb|EEU98344.1| ATPase, AAA family [Faecalibacterium prausnitzii A2-165]
Length = 679
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D + E++ +VGL +K + A + + +RR A GLK A HM F GNPGTGKT
Sbjct: 414 LDAIRAEINELVGLAPVKEYVFGLADNLQVQQRRAAAGLKT-ASLSMHMIFTGNPGTGKT 472
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+AR++ R L +G L ++ EV R DLVG + GHT P T
Sbjct: 473 TIARLVARYLKAIGALKGGQLVEVTRADLVGRYTGHTAPLT 513
>gi|434406869|ref|YP_007149754.1| AAA+ family ATPase [Cylindrospermum stagnale PCC 7417]
gi|428261124|gb|AFZ27074.1| AAA+ family ATPase [Cylindrospermum stagnale PCC 7417]
Length = 314
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 8/110 (7%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFL 249
S + +D+L+ EL VGL +K ++++ A +L+D RK+LGL G PP HM FL
Sbjct: 31 SHVQEILDQLDQEL---VGLKSVKNKIKEMAALLLVDRIRKSLGLTAG---PPSLHMTFL 84
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPG GKT VA + +LY + + + V V R DLVG+ +G T PKTR
Sbjct: 85 GNPGMGKTTVAMRMAEILYRLEYIRKENVMLVTRDDLVGQGIGQTAPKTR 134
>gi|345019802|ref|ZP_08783415.1| stage V sporulation protein K [Ornithinibacillus scapharcae TW25]
Length = 311
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
++ ELS+ VGL LK ++++ ++++E+R +G+ ++ HM F GNPGTGKT VA
Sbjct: 42 IDQELSDFVGLDTLKSKIKEIYATIVINEKRSQMGM-ANTKQVLHMLFKGNPGTGKTTVA 100
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R L ++ + + +L E +R DLVGE++G T KTR
Sbjct: 101 RKLAKIYFDMNLLSKGHFIEAERADLVGEYIGQTAQKTR 139
>gi|299745186|ref|XP_002910884.1| CbxX/CfqX family protein [Coprinopsis cinerea okayama7#130]
gi|298406472|gb|EFI27390.1| CbxX/CfqX family protein [Coprinopsis cinerea okayama7#130]
Length = 2315
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
LE +IVG E+K +L +W K L+ K+ G+ + P + F G PGTGKT +A
Sbjct: 1796 LEKLFDDIVGHEEIKAKLAQWQKVALVS---KSKGMDPRDQVPTNFVFTGPPGTGKTTIA 1852
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R +G++ Y +G+L + V E +DLVG++VG TGPKTR
Sbjct: 1853 RKMGQVYYDMGLLASTDVFECSASDLVGQYVGQTGPKTR 1891
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
FLG PGTGKT VA++ G++L +G+L V +D G +G + KT+
Sbjct: 1614 FLGPPGTGKTTVAQLYGQILADIGMLSKGEVVLKNPSDFTGTVLGESEDKTK 1665
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%)
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFV 291
++ FLGNPGTGKT VAR L V +LP + E L E V
Sbjct: 1333 NIVFLGNPGTGKTTVAREYAAFLSYVKVLPGNEFKETSGAKLANEGV 1379
>gi|374710379|ref|ZP_09714813.1| ATPase AAA [Sporolactobacillus inulinus CASD]
Length = 366
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+DE+ +L +VGL +K Q+R + + R GLK + + HMAFLGNPGT KT
Sbjct: 98 VDEILIQLDELVGLEHVKQQVRDLIDFNQIQQLRVKNGLK-KSNKTLHMAFLGNPGTAKT 156
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+GR+ +G+L + E RTDL+ E+ G T K +R +
Sbjct: 157 TVARIVGRMYKAIGLLSKGQFIEASRTDLIAEYQGQTAIKVKRLI 201
>gi|218282499|ref|ZP_03488755.1| hypothetical protein EUBIFOR_01337 [Eubacterium biforme DSM 3989]
gi|218216554|gb|EEC90092.1| hypothetical protein EUBIFOR_01337 [Eubacterium biforme DSM 3989]
Length = 432
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 70/110 (63%), Gaps = 1/110 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E++ +++L+ +L +++GL +K Q+ + +D RK+ GLKV + H+ F GNP
Sbjct: 155 ESEESLEDLQKQLDSMIGLDGVKQQVHSIINELKIDALRKSKGLKV-SNTSKHLVFKGNP 213
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GTGKT +AR+L ++ +GIL ++ EV R+++V +VG T KT+ ++
Sbjct: 214 GTGKTTIARLLSKIYKQLGILEKGQLVEVDRSEIVAGYVGQTALKTKEKI 263
>gi|6016879|dbj|BAA31534.2| unnamed protein product [Bacillus sp.]
Length = 549
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E +K D LE +LS +VGL +K +R ++ +++R+ GLKV A + HM F GNP
Sbjct: 278 EDNSKFD-LETKLSQVVGLENVKQLIRTQQNLLIAEKKRREAGLKVDATQSLHMIFSGNP 336
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKT VARI+ + +G+L + EV L GE VG T KT
Sbjct: 337 GTGKTTVARIMASMFKEMGLLKSGNFVEVDSGGLTGEHVGQTAKKT 382
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
++ +++++ EL IVG+ +K + K + + + R++ G HM F GNPGT
Sbjct: 12 ESSIEDIKKELEQIVGIKSVKDYILKIEDNLKVQQLRESKGFS-RTNISMHMVFTGNPGT 70
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GKT +ARI+ + L ++G+L T ++ EV R DLVGE+VG T T
Sbjct: 71 GKTTIARIVAKYLKVIGVLSTGQLREVTRADLVGEYVGQTARLT 114
>gi|242017239|ref|XP_002429099.1| Tankyrase-1, putative [Pediculus humanus corporis]
gi|212513963|gb|EEB16361.1| Tankyrase-1, putative [Pediculus humanus corporis]
Length = 1151
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+SGDL A QRLL P ++N ++ TPLH ++GYN+ IV+ LL+ ++
Sbjct: 496 AKSGDLEAIQRLLSSYPQIVNCQDLDGRHSTPLHFASGYNRVSIVEYLLDH----GADVH 551
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 552 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 607
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL++ AD S K+ +G TPLD + G
Sbjct: 608 LLLKHGADASKKNRDGSTPLDLVKEG 633
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 15/141 (10%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G++ QRL+ + +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 651 AKKGNVTRVQRLISSDN--INCRDAQGRNSTPLHLAAGYNNIEVAELLLEH----GADVN 704
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R+
Sbjct: 705 AQDKGGLIPLHNASSYGHLDIAALLIKYHTAVNATDKWGFTPLHEAAQKEERN------- 757
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
L + AD K+ EG+TPL+
Sbjct: 758 -YLAHGADPFLKNQEGQTPLE 777
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 17/165 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN+ +V+ LL+ + ++ A++ G PLH A G E ++L+ HGA
Sbjct: 210 TPLHLAAGYNRGRVVQLLLK----NGADVHAKDKGGLVPLHNACSYGHFEVTEMLIKHGA 265
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL AD + + K+P+D A
Sbjct: 266 NVNAMDLWQFTPLHEAASKS-RVE---VCSLLLSEGADPTIFNCHSKSPID-------VA 314
Query: 170 KLRELLLWHSEEQRKRRALEACSETK-AKMDE-LENELSNIVGLH 212
R+L E + LEAC +T A++ + L +EL N L+
Sbjct: 315 PTRDLQQKLIHEFKGHCLLEACRQTDPARVKKYLSSELVNFKHLY 359
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++G+L ++L+ + +N R+ TPLH +AGY + E+V+ LL + ++A
Sbjct: 30 KTGNLNKVKKLVSQQS--VNARDTAGRKSTPLHFAAGYGRKEVVEFLL----STGASIQA 83
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G + +LLL GA + N TPLH + +I+ + +
Sbjct: 84 RDDGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWSYTPLHEA---AIKGKIDVCI-A 139
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL+ AD S +++EGKT L+
Sbjct: 140 LLQNGADPSIRNSEGKTALE 159
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 33/153 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A K EIV+ LL+ G D + +N G TPL + K G + A LL + A
Sbjct: 592 TPLHEAAAKGKYEIVRLLLKH-GADASK---KNRDGSTPLDLV-KEGDQDVADLLRGNVA 646
Query: 110 FIEAKANNGMT----------------------PLHLSVWYSIRSEDYATVKTLLEYNAD 147
++A +T PLHL+ Y+ + + LLE+ AD
Sbjct: 647 LLDAAKKGNVTRVQRLISSDNINCRDAQGRNSTPLHLAAGYN----NIEVAELLLEHGAD 702
Query: 148 CSAKDNEGKTPLDHLSNGPGSAKLRELLL-WHS 179
+A+D G PL H ++ G + LL+ +H+
Sbjct: 703 VNAQDKGGLIPL-HNASSYGHLDIAALLIKYHT 734
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 39 LLNERNPVMAQTPLHVSAGY---NKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKN 95
L+N ++ TPLH A + +++ SL+ N L +N TPLH+AA
Sbjct: 352 LVNFKHLYTGDTPLHCVAASPYPKRKQVLDSLIRKGAN----LNDKNKNLLTPLHLAADK 407
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
+ LL HGA + A + G T LH R + K L+ YN D S +G
Sbjct: 408 SHYDVMDALLRHGAKVNALDDLGQTALHRCA----RDGNIQACKILMSYNVDLSIVSLQG 463
Query: 156 KT 157
T
Sbjct: 464 LT 465
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA +LLL +GA + AK G+ PLH + Y +
Sbjct: 199 VNCHASDGRRSTPLHLAAGYNRGRVVQLLLKNGADVHAKDKGGLVPLHNACSYG----HF 254
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ L+++ A+ +A D TPL
Sbjct: 255 EVTEMLIKHGANVNAMDLWQFTPL 278
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
LN++N + TPLH++A + +++ +LL ++ A + G+T LH A++G +
Sbjct: 390 LNDKNKNLL-TPLHLAADKSHYDVMDALLRH----GAKVNALDDLGQTALHRCARDGNIQ 444
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHL---------------------SVWYSIRSEDYATV 138
A K+L+++ + + G+T L + + +S D +
Sbjct: 445 ACKILMSYNVDLSIVSLQGLTAAQLGTENVTKILQDPSSGSSDSECQLLEAAKSGDLEAI 504
Query: 139 KTLLEYN---ADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ LL +C D TPL H ++G + E LL H +
Sbjct: 505 QRLLSSYPQIVNCQDLDGRHSTPL-HFASGYNRVSIVEYLLDHGAD 549
>gi|358460783|ref|ZP_09170960.1| AAA ATPase central domain protein [Frankia sp. CN3]
gi|357075082|gb|EHI84567.1| AAA ATPase central domain protein [Frankia sp. CN3]
Length = 965
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 11/116 (9%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGT 254
+D+L EL+ +VGL +K + K M RR+ GL PP ++ F GNPGT
Sbjct: 700 LDDLLAELAGLVGLDRVKRDVGAQVKLMQTVRRRQEAGLAA----PPLSRNLIFAGNPGT 755
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRRVGHLL 306
GKT VAR+ GRLL +G+L + E R+ +VGE++GHT PKT RR +G +L
Sbjct: 756 GKTTVARLYGRLLTALGMLERGHLVEADRSAMVGEYIGHTAPKTTAVFRRALGGVL 811
>gi|113953691|ref|YP_731148.1| cbbX protein [Synechococcus sp. CC9311]
gi|113881042|gb|ABI46000.1| cbbX protein homolog [Synechococcus sp. CC9311]
Length = 307
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-- 244
A A S +++L+ EL VGL +K ++R+ A +L+D R+ L L+ A P
Sbjct: 9 AAYADSGVAEVLEQLDQEL---VGLRPVKTRIREIAALLLVDRARQQLDLQSTA---PGL 62
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGH 304
HM+F G PGTGKT VA+ + ++L+ +G L V V R DLVG++VGHT PKTR +
Sbjct: 63 HMSFTGKPGTGKTTVAKRISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMIKR 122
Query: 305 LL 306
L
Sbjct: 123 AL 124
>gi|304316830|ref|YP_003851975.1| stage V sporulation protein K [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433654973|ref|YP_007298681.1| stage V sporulation protein K [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|302778332|gb|ADL68891.1| stage V sporulation protein K [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|433293162|gb|AGB18984.1| stage V sporulation protein K [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 296
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 182 QRKRRALEACSETKAKMDELE--NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
+RK ++ E + K K E+E EL++++GL+++K + + + +RK GL
Sbjct: 14 ERKAKSEENKNIDKDKNLEIEALKELNSLIGLNKVKQIINELYALEQVQIKRKNAGL--- 70
Query: 240 ARRPP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
A P HM F GNPGTGKT VARILG+LL +G+L V EV+R DLVGE++GHT +
Sbjct: 71 ATDPIVLHMVFKGNPGTGKTTVARILGKLLKGIGVLSKGHVVEVERADLVGEYIGHTAHR 130
Query: 298 TRRRV 302
+ V
Sbjct: 131 VQENV 135
>gi|421858015|ref|ZP_16290304.1| ATPase [Paenibacillus popilliae ATCC 14706]
gi|410832465|dbj|GAC40741.1| ATPase [Paenibacillus popilliae ATCC 14706]
Length = 329
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +++GL ++K + + + + RKA GLKV + HM F GNPGTGKT VARI+
Sbjct: 53 ELDDMIGLEKIKEFVFSMYAILQVRKLRKAEGLKVD-EQVFHMIFKGNPGTGKTTVARII 111
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
++ +G+L + EV+R DLVGE++GHT KTR +
Sbjct: 112 AKMFKTMGLLGKGHLIEVERADLVGEYIGHTAQKTREVI 150
>gi|323703574|ref|ZP_08115219.1| AAA ATPase central domain protein [Desulfotomaculum nigrificans DSM
574]
gi|333923594|ref|YP_004497174.1| AAA ATPase [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323531477|gb|EGB21371.1| AAA ATPase central domain protein [Desulfotomaculum nigrificans DSM
574]
gi|333749155|gb|AEF94262.1| AAA ATPase central domain protein [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 319
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 7/117 (5%)
Query: 199 DELENELSNIVGLHELKI---QLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+E+ EL ++GL +K +++ + + L +R K + + HM F GNPGTG
Sbjct: 51 NEILKELDTLIGLTSVKKLVKEIQAFVEIQKLRQREKLIYEPMVL----HMIFKGNPGTG 106
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
KT VARI+GRL +G+LP + EV+R DLVGE++GHT KTR ++ L I +
Sbjct: 107 KTTVARIIGRLFKEIGVLPKGHLIEVERADLVGEYIGHTAAKTRDQIKKALGGILFI 163
>gi|189183509|ref|YP_001937294.1| ankyrin repeat-containing protein 12_01 [Orientia tsutsugamushi
str. Ikeda]
gi|189180280|dbj|BAG40060.1| ankyrin repeat-containing protein 12_01 [Orientia tsutsugamushi
str. Ikeda]
Length = 494
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 24 GDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM 83
GD+ A +L ENP L+N + V +TPLH S + + EI K LLE N V L+ N
Sbjct: 12 GDVKAVLDILNENPGLVNFQQDVDFKTPLHTSVEHKQEEITKLLLERNAN--VTLQDNN- 68
Query: 84 YGETPLHMAAKNGCNEAAKLLLAHG-AFIEAKANNGMTPLHLS---------VWYSIRSE 133
G TPLH+AA+N + ++LL+HG A ++ + N G TPLHL+ + E
Sbjct: 69 -GNTPLHVAARNHDLKTTEILLSHGNAIVDMQNNKGQTPLHLASTRPYTHQGASSLLSKE 127
Query: 134 DYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ + LL + A + +D +G T L + +N ++ E+LL H
Sbjct: 128 SLSIAQALLTHGAKVNLQDGDGNTALHYATNSFHHKEITEILLNH 172
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 50 TPLHVSA-GYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
T LH + ++ EI + LL N + AQN G+T LH AAKNG LL G
Sbjct: 151 TALHYATNSFHHKEITEILLNHGAN----VNAQNNLGDTALHRAAKNGFLPTVVCLLKSG 206
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
A + K NG + LH + R + + VK +L + AD +A++N TPL H
Sbjct: 207 ASVHLKGENGNSVLHCAAQG--RGPNESIVKAVLHHGADVNARNNNDSTPLHH 257
>gi|295101189|emb|CBK98734.1| ATPases of the AAA+ class [Faecalibacterium prausnitzii L2-6]
Length = 671
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ EL+++VGL +K + A + + +RR A GLK A HM F GNPGTGKT
Sbjct: 409 VEEIRKELNDLVGLAPVKEYVFGLADNIQVQQRRAAAGLKT-ASLSMHMIFTGNPGTGKT 467
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+AR++ + L +G L ++ EV R DLVG + GHT P T
Sbjct: 468 TIARLVAKYLKAIGALKGGQLVEVSRGDLVGRYTGHTAPLT 508
>gi|402817020|ref|ZP_10866609.1| stage V sporulation protein K [Paenibacillus alvei DSM 29]
gi|402505126|gb|EJW15652.1| stage V sporulation protein K [Paenibacillus alvei DSM 29]
Length = 331
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+EL ++GL ++K + + + +++ RK G+ V + HM F GNPGTGKT VARI
Sbjct: 56 DELDELIGLDKVKELVFQIYAMLTINQHRKNEGMLVN-EQVYHMIFKGNPGTGKTSVARI 114
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
L +L +G+L + EV R DLVGE++GHT KTR V
Sbjct: 115 LAKLFKTMGLLSKGHLLEVHRADLVGEYIGHTAQKTREVV 154
>gi|402300565|ref|ZP_10820053.1| stage V sporulation protein K [Bacillus alcalophilus ATCC 27647]
gi|401724290|gb|EJS97665.1| stage V sporulation protein K [Bacillus alcalophilus ATCC 27647]
Length = 317
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 175 LLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKAL 234
L+++SEE +++ + + E + + +GL ++K + + + ++ R+
Sbjct: 30 LVYYSEEDKEKHEI---------LKRFEKRMEDFIGLKDVKKLINEIYAWLYVNRCREQN 80
Query: 235 GLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
GLKV +++ HM F GNPGTGKT VARI+ + + +L + EV+R DLVGE++GHT
Sbjct: 81 GLKV-SKQVLHMIFKGNPGTGKTTVARIIAEFFHEMNVLEKGHLLEVERADLVGEYIGHT 139
Query: 295 GPKTR 299
KTR
Sbjct: 140 AQKTR 144
>gi|329930860|ref|ZP_08284259.1| putative stage V sporulation protein K [Paenibacillus sp. HGF5]
gi|328934562|gb|EGG31067.1| putative stage V sporulation protein K [Paenibacillus sp. HGF5]
Length = 305
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
E++ EL +VGL ++K + + + + + R GL G HM F GNPGTGKT
Sbjct: 32 FQEIQKELDQLVGLEQIKDLVFEIYALLQVAQMRSEAGLLSGGHVY-HMIFKGNPGTGKT 90
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VARI+ +L +G+L + EV+R DLVGE++GHT KTR V L I +
Sbjct: 91 TVARIVAKLFQKMGVLNKGHLVEVERADLVGEYIGHTAQKTRELVKKALGGILFI 145
>gi|347738124|ref|ZP_08869720.1| CbbX protein [Azospirillum amazonense Y2]
gi|346918943|gb|EGY00695.1| CbbX protein [Azospirillum amazonense Y2]
Length = 332
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
D+L+ E+ VGL +K +LR+ A +L+D R+ GL VG PP HM+F GNPGTG
Sbjct: 46 FDQLDQEM---VGLAPIKRRLREIAALLLVDRARQRFGLAVG---PPTLHMSFTGNPGTG 99
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT +A + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 100 KTTLALKMAAILHRLGYVRRGHLVTVTRDDLVGQYIGHTAPKTK 143
>gi|307727437|ref|YP_003910650.1| CbbX protein [Burkholderia sp. CCGE1003]
gi|307587962|gb|ADN61359.1| CbbX protein [Burkholderia sp. CCGE1003]
Length = 346
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R++LGL GA P HM F GNPGTGKT VA +
Sbjct: 30 DLVGLAPVKTRIREIAAHLLVERARESLGLASGA--PTLHMCFSGNPGTGKTTVALRMAE 87
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 88 VLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 121
>gi|430749975|ref|YP_007212883.1| AAA ATPase [Thermobacillus composti KWC4]
gi|430733940|gb|AGA57885.1| AAA+ family ATPase [Thermobacillus composti KWC4]
Length = 327
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E + E++ EL +VG+ ++K + + + + R A GL VG + HM F GNP
Sbjct: 49 EPGSPFAEIQRELDAMVGMEKVKALIYEIYALLHVSGLRAAAGLSVGPQVY-HMIFRGNP 107
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT +ARI+ +L +G+L + EV+R DLVGE++GHT KTR
Sbjct: 108 GTGKTTIARIVAKLFQKMGVLQKGHLIEVERADLVGEYIGHTAQKTR 154
>gi|152976103|ref|YP_001375620.1| sporulation stage V protein K [Bacillus cytotoxicus NVH 391-98]
gi|152024855|gb|ABS22625.1| Sporulation stage V protein K [Bacillus cytotoxicus NVH 391-98]
Length = 318
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 191 CSETKAK---MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+ET K + ++E E+ +VG+ E+K +++ + ++++R+ GLK ++ HM
Sbjct: 35 SNETATKHEMLQKIEEEMGKLVGMEEIKKIIKEIYAWIYVNKKRQEAGLK-SEKQVLHML 93
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VAR++G+LL+ + +L + E +R DLVGE++GHT KTR
Sbjct: 94 FKGNPGTGKTTVARLIGKLLFEMNVLSKGHLVEAERADLVGEYIGHTAQKTR 145
>gi|32475580|ref|NP_868574.1| stage V sporulation protein K [Rhodopirellula baltica SH 1]
gi|32446122|emb|CAD75951.1| probable stage V sporulation protein K-putative ATPase of the AAA
family [Rhodopirellula baltica SH 1]
Length = 610
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 157 TPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKI 216
TP P S + + + EQ R E +E +AK+D L +GL +K
Sbjct: 236 TPTRAGGGSPASTEPAKPSTKETAEQDDRTPEERLAEARAKLDRL-------IGLDAIKN 288
Query: 217 QLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTD 276
Q++ A + ++ R GL + HMAF+GNPGTGKT VARI+ + +G+L
Sbjct: 289 QIQTLANFLAMERHRAKEGLPT-TKPSLHMAFVGNPGTGKTTVARIIAEIYGGLGVLEKG 347
Query: 277 RVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ E R+ LV E+ G TGPKT ++ L +
Sbjct: 348 HLVETDRSGLVAEYAGQTGPKTNAKIDEALDGV 380
>gi|449135938|ref|ZP_21771364.1| AAA ATPase central domain protein [Rhodopirellula europaea 6C]
gi|448885380|gb|EMB15825.1| AAA ATPase central domain protein [Rhodopirellula europaea 6C]
Length = 611
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 157 TPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKI 216
TP P S + + + EQ R E +E +AK+D L +GL +K
Sbjct: 236 TPTRAGGGSPASTEPAKTPAKETAEQDDRTPEERLAEARAKLDRL-------IGLDAIKN 288
Query: 217 QLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTD 276
Q++ A + ++ R GL + HMAF+GNPGTGKT VARI+ + +G+L
Sbjct: 289 QIQTLANFLAMERHRAKEGLPT-TKPSLHMAFVGNPGTGKTTVARIIAEIYGGLGVLEKG 347
Query: 277 RVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ E R+ LV E+ G TGPKT ++ L +
Sbjct: 348 HLVETDRSGLVAEYAGQTGPKTNAKIDEALDGV 380
>gi|377813677|ref|YP_005042926.1| CbbX-like protein AAA ATPase [Burkholderia sp. YI23]
gi|357938481|gb|AET92039.1| CbbX-like protein, putative AAA ATPase [Burkholderia sp. YI23]
Length = 304
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 70/106 (66%), Gaps = 4/106 (3%)
Query: 196 AKMDELENELS-NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPG 253
+++ E+ EL +++GL +K ++R+ A +L++ R+ LG+ GA P HM F GNPG
Sbjct: 25 SRIGEVLTELDRDLIGLAPVKTRIREIAAHLLVERARETLGIASGA--PTLHMCFSGNPG 82
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
TGKT VA + ++L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 83 TGKTTVALRMAQVLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 128
>gi|417300819|ref|ZP_12088007.1| AAA ATPase central domain protein [Rhodopirellula baltica WH47]
gi|327542889|gb|EGF29345.1| AAA ATPase central domain protein [Rhodopirellula baltica WH47]
Length = 610
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 157 TPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKI 216
TP P S + + + EQ R E +E +AK+D L +GL +K
Sbjct: 236 TPTRAGGGSPASTEPAKPSTKETAEQDDRTPEERLAEARAKLDRL-------IGLDAIKN 288
Query: 217 QLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTD 276
Q++ A + ++ R GL + HMAF+GNPGTGKT VARI+ + +G+L
Sbjct: 289 QIQTLANFLAMERHRAKEGLPT-TKPSLHMAFVGNPGTGKTTVARIIAEIYGGLGVLEKG 347
Query: 277 RVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ E R+ LV E+ G TGPKT ++ L +
Sbjct: 348 HLVETDRSGLVAEYAGQTGPKTNAKIDEALDGV 380
>gi|82799245|gb|ABB92172.1| putative RuBisCo-expression protein CbbX [uncultured marine type-A
Synechococcus 4O4]
gi|90655457|gb|ABD96297.1| probable RuBisCo-expression protein CbbX [uncultured marine type-A
Synechococcus GOM 3O6]
Length = 301
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D+ R+ L L A P HM+F GNPGTGK
Sbjct: 20 LDQLDREL---IGLTPVKTRIREIAALLLVDQARQQLELASTA--PSLHMSFTGNPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|3913225|sp|O22034.1|CFXQ2_CYACA RecName: Full=Protein cfxQ homolog
gi|2541895|dbj|BAA22830.1| CfxQ protein [Cyanidium caldarium]
Length = 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ + +D+L+ EL +GL +K ++R+ A +L+D R+ LGL + P HM+F G
Sbjct: 12 TQIQQVLDDLDREL---IGLQAVKTRIREIAALLLVDRLRQKLGL--SSSNPGLHMSFTG 66
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+PGTGKT VA + +LY +G + + V R DLVG+++GHT PKT++
Sbjct: 67 SPGTGKTTVATKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQ 116
>gi|413965450|ref|ZP_11404676.1| CbbX-like protein AAA ATPase [Burkholderia sp. SJ98]
gi|413928124|gb|EKS67413.1| CbbX-like protein AAA ATPase [Burkholderia sp. SJ98]
Length = 306
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
Query: 195 KAKMDELENELS-NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNP 252
++++ E+ EL +++GL +K ++R+ A +L++ R+ LG+ GA P HM F GNP
Sbjct: 26 ESRIGEVLAELDRDLIGLAPVKTRIREIAAHLLVERARETLGIASGA--PTLHMCFSGNP 83
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VA + ++L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 84 GTGKTTVALRMAQVLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 130
>gi|440682074|ref|YP_007156869.1| AAA ATPase [Anabaena cylindrica PCC 7122]
gi|428679193|gb|AFZ57959.1| AAA ATPase [Anabaena cylindrica PCC 7122]
Length = 312
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
S + +D+L+ EL VGL +K ++++ A +L+D RK+LGL GA P HM FLG
Sbjct: 29 SHIQDILDKLDEEL---VGLKSVKNKIKEMAALLLVDRIRKSLGLTAGA--PSLHMTFLG 83
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
NPG GKT VA + +LY + + + V V R DLVG+ +G TGPKTR
Sbjct: 84 NPGMGKTTVAMRMAEILYRLEYIRKENVMLVTRDDLVGQGMGQTGPKTR 132
>gi|414076601|ref|YP_006995919.1| ATPase [Anabaena sp. 90]
gi|413970017|gb|AFW94106.1| ATPase [Anabaena sp. 90]
Length = 308
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
S + +D+L+ EL VGL +K ++R+ A +L+D RK+LGL GA P HM FLG
Sbjct: 25 SHIQEILDKLDQEL---VGLKSVKNKIREMAALLLVDRIRKSLGLNAGA--PSLHMTFLG 79
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
NPG GKT VA + +LY + + + V V R DLVG+ +G T PKTR
Sbjct: 80 NPGMGKTTVAMRMAEILYRLEYIRKENVMLVTRDDLVGQGMGQTAPKTR 128
>gi|423375715|ref|ZP_17353051.1| hypothetical protein IC5_04767 [Bacillus cereus AND1407]
gi|401090959|gb|EJP99105.1| hypothetical protein IC5_04767 [Bacillus cereus AND1407]
Length = 367
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
+ +D L +L +VGL +K Q+R + R GLK + + HMAFLGNPG
Sbjct: 94 SNVSLDALVKQLDELVGLENVKQQVRDLIDYNQIQNLRVKNGLK-KSNKTLHMAFLGNPG 152
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T KT VARI+GR+ +G+L + E RTDL+ E+ G T K +R +
Sbjct: 153 TAKTTVARIVGRMYKAIGLLSKGQFIEASRTDLIAEYQGQTAIKVKRLI 201
>gi|328542606|ref|YP_004302715.1| CbbX-like protein, containing AAA-ATPase domain [Polymorphum gilvum
SL003B-26A1]
gi|326412353|gb|ADZ69416.1| Putative CbbX-like protein, containing AAA-ATPase domain
[Polymorphum gilvum SL003B-26A1]
Length = 306
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL VGL +K ++R+ A +L++ RKA+GL A P HM+F GNPGTG
Sbjct: 30 LDELDREL---VGLKPVKQRIREIAALLLVERARKAMGL---AHETPTLHMSFTGNPGTG 83
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 84 KTTVALRMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 127
>gi|261406201|ref|YP_003242442.1| AAA ATPase central domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261282664|gb|ACX64635.1| AAA ATPase central domain protein [Paenibacillus sp. Y412MC10]
Length = 327
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
E++ EL +VGL ++K + + + + + R GL G HM F GNPGTGKT
Sbjct: 54 FQEIQKELDQLVGLEQIKDLVFEIYALLQVAQMRSEAGLLSGGHVY-HMIFKGNPGTGKT 112
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VARI+ +L +G+L + EV+R DLVGE++GHT KTR V L I +
Sbjct: 113 TVARIVAKLFQKMGVLNKGHLVEVERADLVGEYIGHTAQKTRELVKKALGGILFI 167
>gi|322392271|ref|ZP_08065732.1| stage V sporulation protein K [Streptococcus peroris ATCC 700780]
gi|321144806|gb|EFX40206.1| stage V sporulation protein K [Streptococcus peroris ATCC 700780]
Length = 621
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
E +LS ++GL E+KI L + + R+A G H+ F GNPGTGKT+VAR
Sbjct: 339 EKKLSELIGLEEVKIVLNQQLAYNRVSALRQAHGYS-NEILNRHLVFSGNPGTGKTVVAR 397
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+ +LY I+ +++ EV RTDLVGE+VG T PK R+
Sbjct: 398 LFSEILYNNKIIQENKLVEVGRTDLVGEYVGQTAPKVRK 436
>gi|90420023|ref|ZP_01227932.1| rubisco expression protein CbbX [Aurantimonas manganoxydans
SI85-9A1]
gi|90336064|gb|EAS49812.1| rubisco expression protein CbbX [Aurantimonas manganoxydans
SI85-9A1]
Length = 318
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DEL+ EL +GL +K ++R+ A +L++ RK LGL A P HM+F GNPGTG
Sbjct: 39 LDELDREL---IGLAPVKKRIRETAALLLVERARKRLGL---AHDTPTLHMSFTGNPGTG 92
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G + + V R DLVG+++GHT PKTR
Sbjct: 93 KTTVAMKMANLLHRLGYIRKGHLVSVTRDDLVGQYIGHTAPKTR 136
>gi|414155125|ref|ZP_11411440.1| Stage V sporulation protein K [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411453175|emb|CCO09344.1| Stage V sporulation protein K [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 321
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ EL ++GL +K +++ + + + R+ L + HM F GNPGTGKT V
Sbjct: 54 EILGELDQLIGLSSVKKLVKEIQAFVEIQKLRQKEKL-IYEPMVLHMIFKGNPGTGKTTV 112
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
ARI+GRL +G+LP + EV+R DLVGE++GHT KTR ++ L I +
Sbjct: 113 ARIIGRLFKEMGVLPKGHLIEVERADLVGEYIGHTAAKTRDQIKKALGGILFI 165
>gi|134299731|ref|YP_001113227.1| ATPase central domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052431|gb|ABO50402.1| AAA ATPase, central domain protein [Desulfotomaculum reducens MI-1]
Length = 318
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 178 HSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
S +Q K + LE + E+ EL ++GL +K +R+ + + R+ L
Sbjct: 31 QSVQQEKSQLLEEIDRKATQ--EILGELDQLIGLDSVKKLVREIQAFVEIQRLRQKEKL- 87
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
+ HM F GNPGTGKT VARI+GRL + +LP + EV+R DLVGE++GHT K
Sbjct: 88 IFEPMVLHMIFKGNPGTGKTTVARIIGRLFKEMAVLPKGHLIEVERADLVGEYIGHTAAK 147
Query: 298 TRRRV 302
TR ++
Sbjct: 148 TRDQI 152
>gi|88807738|ref|ZP_01123250.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. WH
7805]
gi|88788952|gb|EAR20107.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. WH
7805]
Length = 309
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ +L++EL +GLH +K ++R+ A +L+D+ R+ L L V HM+F G PGTGKT
Sbjct: 20 LQQLDHEL---IGLHPVKTRIREIAALLLVDQARRQLDL-VSTAPSLHMSFTGQPGTGKT 75
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA + +L+ +G L V V R DLVG++VGHT PKT+ +
Sbjct: 76 TVALRMSLILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTKEMI 120
>gi|421604987|ref|ZP_16046989.1| CbbX protein, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404262901|gb|EJZ28579.1| CbbX protein, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 166
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 73/117 (62%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T A + +LE EL +GL +K ++R+ A +L++ R+ GL A PP
Sbjct: 38 RKEAEAAGIT-ATLQQLEQEL---IGLKPVKSRVRQIASLLLIERIRQRAGL---ASAPP 90
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 91 TLHMSFTGNPGTGKTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 147
>gi|33866239|ref|NP_897798.1| RuBisCo-expression protein CbbX [Synechococcus sp. WH 8102]
gi|33639214|emb|CAE08222.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. WH
8102]
Length = 301
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D+ R+ L L A P HM+F GNPGTGK
Sbjct: 20 LDQLDREL---IGLTPVKTRIREIAALLLVDQARQQLELASTA--PSLHMSFTGNPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|119720190|ref|YP_920685.1| ankyrin [Thermofilum pendens Hrk 5]
gi|119525310|gb|ABL78682.1| Ankyrin [Thermofilum pendens Hrk 5]
Length = 870
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 116/231 (50%), Gaps = 36/231 (15%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
+++ D +R+ T +H SG++ A RLL E+ + ++ RN TPLH +A
Sbjct: 645 IERGADINARTKDGETPLHKATSSGNVEAV-RLLLEHGADVDARND-FGGTPLHHAAARG 702
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLH-------MAAKNG---CNEAAKLLLAHGA 109
EIV+ LL+ + A+N +GETPLH M +KN C A+LLL HGA
Sbjct: 703 HLEIVRLLLKHGADSN----ARNSHGETPLHYVAEHADMCSKNAWDNCLRIAELLLIHGA 758
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ + TPLH++V++ R E + LLE+ AD +A+D EG TPL +
Sbjct: 759 DVNARDSRDQTPLHIAVFFGSR-EHLEVARWLLEHGADPNARDWEGNTPLHY-------- 809
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRK 220
++ HS + +R A+E E A + + N GL L++ + K
Sbjct: 810 -----VIEHSFWRERREAIELLLEHGA-----DPSIRNSEGLSPLQLAVIK 850
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 76/133 (57%), Gaps = 11/133 (8%)
Query: 27 LAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGE 86
+ +LL E + +N RN +TPLH +A AE+VK LLE G D ++A +G
Sbjct: 199 IEVSKLLLERGADVNARNN-EGRTPLHRAAMEGSAEVVKFLLE-RGADPCAVDA---FGN 253
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+A KN E AKLLL GA AK ++GMTPLH + V+ LLE+ A
Sbjct: 254 TPLHLAFKN--MEVAKLLLEKGADPNAKNSSGMTPLHFAAGLG----KVEVVELLLEHGA 307
Query: 147 DCSAKDNEGKTPL 159
D AKDN+G TPL
Sbjct: 308 DVDAKDNDGLTPL 320
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 17/162 (10%)
Query: 17 IHGCAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
+H A G + + LL +P+ +E TPLH++A A+I + LL+
Sbjct: 93 LHWAAVYGHFVVAEVLLDRGADPNATDEE----GNTPLHLAALLGFADIARLLLD----R 144
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
++ A+N G+TPLH AA+ G E AKLLL GA A G TPLHL+V RS +
Sbjct: 145 GADVNAKNSSGKTPLHYAAEQGSAEVAKLLLERGADPGATDTYGNTPLHLAV----RSIE 200
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ K LLE AD +A++NEG+TPL H + GSA++ + LL
Sbjct: 201 VS--KLLLERGADVNARNNEGRTPL-HRAAMEGSAEVVKFLL 239
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 76/129 (58%), Gaps = 12/129 (9%)
Query: 36 NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKN 95
+PSL+ + T LH +A + A++V+ LLE ++ A++ YG TPLH AA+
Sbjct: 351 DPSLIGSD----SYTLLHKAAFWCYAKVVRLLLE----KGLDANAKDEYGRTPLHWAAER 402
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
GC E +LLL HGA A+ ++GMTPLHL+ +D K LLE+ AD +A++ G
Sbjct: 403 GCPEVVELLLEHGADPNARNDSGMTPLHLAA----TVKDTEAAKLLLEHGADPNAEEYGG 458
Query: 156 KTPLDHLSN 164
TPL +S+
Sbjct: 459 STPLAIISS 467
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 77/132 (58%), Gaps = 9/132 (6%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL E + +N R+ +TPLH +AG A I + L+E ++ A+ GETPLH
Sbjct: 610 LLLERGADINARD-WFDRTPLHGAAGCRDAGIARFLIE----RGADINARTKDGETPLHK 664
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
A +G EA +LLL HGA ++A+ + G TPLH ++ V+ LL++ AD +A+
Sbjct: 665 ATSSGNVEAVRLLLEHGADVDARNDFGGTPLH----HAAARGHLEIVRLLLKHGADSNAR 720
Query: 152 DNEGKTPLDHLS 163
++ G+TPL +++
Sbjct: 721 NSHGETPLHYVA 732
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 93/196 (47%), Gaps = 34/196 (17%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE------- 69
+H A +GD+ + LL E + +N RN +TPLHV+A E VK LLE
Sbjct: 536 LHAAAWNGDVEVIEILL-ERGADINARNK-FGETPLHVAAERGNFEAVKLLLERGAEVNA 593
Query: 70 -----------WPG-----NDKVELEAQNMYGETPLHMAAKNGCNEA--AKLLLAHGAFI 111
W ++ A++ + TPLH AA GC +A A+ L+ GA I
Sbjct: 594 DALCYAARSCRWDVFTLLLERGADINARDWFDRTPLHGAA--GCRDAGIARFLIERGADI 651
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
A+ +G TPLH + S + V+ LLE+ AD A+++ G TPL H + G ++
Sbjct: 652 NARTKDGETPLH----KATSSGNVEAVRLLLEHGADVDARNDFGGTPLHHAA-ARGHLEI 706
Query: 172 RELLLWHSEEQRKRRA 187
LLL H + R +
Sbjct: 707 VRLLLKHGADSNARNS 722
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 98/227 (43%), Gaps = 53/227 (23%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAG 57
+++ D +R+ + T +H A G + LL +P ++ TPLH++
Sbjct: 206 LERGADVNARNNEGRTPLHRAAMEGSAEVVKFLLERGADPCAVD----AFGNTPLHLA-- 259
Query: 58 YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN 117
+ E+ K LLE G D A+N G TPLH AA G E +LLL HGA ++AK N+
Sbjct: 260 FKNMEVAKLLLE-KGADP---NAKNSSGMTPLHFAAGLGKVEVVELLLEHGADVDAKDND 315
Query: 118 GMTPL----HLSVWYS-----------------------IRSEDYA------------TV 138
G+TPL H Y I S+ Y V
Sbjct: 316 GLTPLAYAAHRQDMYIRADALTALKVVGLLLERGADPSLIGSDSYTLLHKAAFWCYAKVV 375
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ LLE D +AKD G+TPL H + G ++ ELLL H + R
Sbjct: 376 RLLLEKGLDANAKDEYGRTPL-HWAAERGCPEVVELLLEHGADPNAR 421
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 15/128 (11%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
T LH +A E+++ LLE ++ A+N +GETPLH+AA+ G EA KLLL G
Sbjct: 533 NTLLHAAAWNGDVEVIEILLE----RGADINARNKFGETPLHVAAERGNFEAVKLLLERG 588
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + A A + Y+ RS + LLE AD +A+D +TPL H + G
Sbjct: 589 AEVNADA----------LCYAARSCRWDVFTLLLERGADINARDWFDRTPL-HGAAGCRD 637
Query: 169 AKLRELLL 176
A + L+
Sbjct: 638 AGIARFLI 645
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGN----DKVELEAQNM----YGETPLHMAAKNGCNEAA 101
PLH +A + AE + LLE + DK+ + + G TPLH AA G A
Sbjct: 46 APLHCAAIFGHAEAARLLLERGADPNVKDKITWDVLSSELGRKGRTPLHWAAVYGHFVVA 105
Query: 102 KLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
++LL GA A G TPLHL+ + LL+ AD +AK++ GKTPL H
Sbjct: 106 EVLLDRGADPNATDEEGNTPLHLAALLGFAD----IARLLLDRGADVNAKNSSGKTPL-H 160
Query: 162 LSNGPGSAKLRELLL 176
+ GSA++ +LLL
Sbjct: 161 YAAEQGSAEVAKLLL 175
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 59/128 (46%), Gaps = 21/128 (16%)
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAK------ 114
A+ VK+LLE V+ A G PLH AA G EAA+LLL GA K
Sbjct: 24 AKRVKALLE----GGVDPNAAGPAGLAPLHCAAIFGHAEAARLLLERGADPNVKDKITWD 79
Query: 115 ------ANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
G TPLH + Y + + LL+ AD +A D EG TPL HL+ G
Sbjct: 80 VLSSELGRKGRTPLHWAAVYG----HFVVAEVLLDRGADPNATDEEGNTPL-HLAALLGF 134
Query: 169 AKLRELLL 176
A + LLL
Sbjct: 135 ADIARLLL 142
>gi|260583473|ref|ZP_05851221.1| spoVK domain protein [Granulicatella elegans ATCC 700633]
gi|260158099|gb|EEW93167.1| spoVK domain protein [Granulicatella elegans ATCC 700633]
Length = 915
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GLH++K Q+ + ++ +R+ G H FLGNPGTGKT VARI+
Sbjct: 659 ELHQLIGLHKVKEQVEDFIAQAEMNRKREQEGFATSVA-TLHSLFLGNPGTGKTTVARIV 717
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLTFI 315
LLY G++ T+++ EV R DL+G + G T KTR HL + + + FI
Sbjct: 718 AELLYQKGLIATNKLIEVSRGDLIGGYQGQTAIKTRE---HLHAALGGVLFI 766
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 183 RKRRALEACSETKA--KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
R +A+ A + A ++D E EL ++VGL +K ++ GM+ +++ L +
Sbjct: 363 RHTKAIGAEGDENAPKELDSYE-ELQSLVGLEAVKKEIDTLI-GMVDYNKQRVLRGEPPQ 420
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTD--RVTEVQRTDLVGEFVGHTGPKT 298
+ H F+GNPGTGKT VAR++G++L+ G L D + EV +DL+ +V T +T
Sbjct: 421 QLVLHSMFMGNPGTGKTTVARLMGKILFERGALFGDTFKFVEVSESDLLSGYVNQTTTQT 480
>gi|296088473|emb|CBI37464.3| unnamed protein product [Vitis vinifera]
Length = 214
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 13/177 (7%)
Query: 8 RSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSL 67
+ R+++ IH A+SGDLL Q + NP +N R+ ++TPLH++A + ++V L
Sbjct: 3 KERNSEIEDIHNAARSGDLLKLQSICSSNPLAVNSRDK-HSRTPLHLAAWAGQTQVVTYL 61
Query: 68 LEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVW 127
+ K ++ A M +H AA+ G E + LL+ GA ++A GMTPLH
Sbjct: 62 CKH----KADVGAAAMDDMGAIHFAAQKGHLEVVRTLLSSGASVKAITRKGMTPLH---- 113
Query: 128 YSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRK 184
Y+ + K L+ SAK GKTPLD GS + R +L+ RK
Sbjct: 114 YAAQGSHLDLAKYLVRKGGSLSAKSKAGKTPLDL----AGSEEFRTVLVECERLSRK 166
>gi|440717860|ref|ZP_20898335.1| AAA ATPase central domain protein [Rhodopirellula baltica SWK14]
gi|436436985|gb|ELP30666.1| AAA ATPase central domain protein [Rhodopirellula baltica SWK14]
Length = 610
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQ R E +E +AK+D L +GL +K Q++ A + ++ R GL
Sbjct: 260 EQDDRTPEERLAEARAKLDRL-------IGLDAIKNQIQTLANFLAMERHRAKEGLPT-T 311
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+ HMAF+GNPGTGKT VARI+ + +G+L + E R+ LV E+ G TGPKT
Sbjct: 312 KPSLHMAFVGNPGTGKTTVARIIAEIYGGLGVLEKGHLVETDRSGLVAEYAGQTGPKTNA 371
Query: 301 RVGHLLSEI 309
++ L +
Sbjct: 372 KIDEALDGV 380
>gi|452953101|gb|EME58524.1| AAA ATPase central domain-containing protein [Amycolatopsis
decaplanina DSM 44594]
Length = 549
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHM 246
A++ + + +D++ EL ++GL +K ++R + ++E R+ GL VGA H+
Sbjct: 268 AVDPGAVGDSALDDMLAELDAMIGLPGVKEEVRALVDELQVNEWRRRAGLPVGAAGH-HL 326
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
F G PGTGKT VARI G+LL +G+LP EV R +LVG+++GHT KT
Sbjct: 327 IFAGAPGTGKTTVARIYGKLLKALGVLPIGEFHEVTRRELVGQYIGHTAEKT 378
>gi|28274854|gb|AAO25692.1| ankyrin repeat protein E4_8, partial [synthetic construct]
Length = 199
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 90/176 (51%), Gaps = 12/176 (6%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
M D +R T +H A G L + LL+ + + V TPLH++A +
Sbjct: 34 MANGADVNARDRDGNTPLHLAADMGHLEIVEVLLKNGADV--NADDVTGFTPLHLAAVWG 91
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
EIV+ LL+ + ++ A + G TPLH+AA NG E ++LL +GA + A NG+
Sbjct: 92 HLEIVEVLLK----NGADVNAIDTIGYTPLHLAANNGHLEIVEVLLKNGADVNAHDTNGV 147
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
TPLHL+ V+ LL+Y AD +A+D GKT D +S G+ L E+L
Sbjct: 148 TPLHLAA----HEGHLEIVEVLLKYGADVNAQDKFGKTAFD-ISIDNGNEDLAEIL 198
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL-SVWYSIRSEDY 135
++ A++ G TPLH+AA G E ++LL +GA + A G TPLHL +VW +
Sbjct: 39 DVNARDRDGNTPLHLAADMGHLEIVEVLLKNGADVNADDVTGFTPLHLAAVWGHLE---- 94
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL+ AD +A D G TPL HL+ G ++ E+LL
Sbjct: 95 -IVEVLLKNGADVNAIDTIGYTPL-HLAANNGHLEIVEVLL 133
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A+ +G TPLHL+ V+ LL+ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNARDRDGNTPLHLAADMG----HLEIVEVLLKNGADVNAD 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G TPL HL+ G ++ E+LL
Sbjct: 77 DVTGFTPL-HLAAVWGHLEIVEVLL 100
>gi|358392447|gb|EHK41851.1| hypothetical protein TRIATDRAFT_229044 [Trichoderma atroviride IMI
206040]
Length = 313
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH + + ++ L N +EA+N YG+TPLH AA G + AKLLL+HG
Sbjct: 150 HTPLHYAVSCRQVDVANLFLSHGAN----IEAENDYGDTPLHRAALYGEVDIAKLLLSHG 205
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I+A++N G TPLH + + R+E + LLE A +A+D EG TPL H+++ G
Sbjct: 206 ANIQAESNEGYTPLHYTAFDG-RTE---VCQLLLEQGASINAQDGEGDTPL-HVASREGE 260
Query: 169 AKLRELLL 176
L +L+
Sbjct: 261 IDLARILV 268
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A Y +A LL G + N TPLH AA N + AKLLL+HG
Sbjct: 83 ETPLHYAASYGEAPFHSKLLLSHGANVEAENNNNN---TPLHNAASNEQVDVAKLLLSHG 139
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I+A+ G TPLH +V S R D A + L + A+ A+++ G TPL H + G
Sbjct: 140 ANIQARDKEGHTPLHYAV--SCRQVDVANL--FLSHGANIEAENDYGDTPL-HRAALYGE 194
Query: 169 AKLRELLLWH 178
+ +LLL H
Sbjct: 195 VDIAKLLLSH 204
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 35/159 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + + E+V+ LL N ++A++ G+TPLH+A + A L+HGA
Sbjct: 18 TKLHNAVRNGETEVVEFLLNHGAN----IQARDEDGDTPLHIAVFCRQVDVANFFLSHGA 73
Query: 110 FIEAKANNGMTPLHLSVWY------------------------------SIRSEDYATVK 139
IEA+ NNG TPLH + Y + +E K
Sbjct: 74 NIEAENNNGETPLHYAASYGEAPFHSKLLLSHGANVEAENNNNNTPLHNAASNEQVDVAK 133
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LL + A+ A+D EG TPL H + + L L H
Sbjct: 134 LLLSHGANIQARDKEGHTPL-HYAVSCRQVDVANLFLSH 171
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 86 ETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN 145
+T LH A +NG E + LL HGA I+A+ +G TPLH++V+ R D A L +
Sbjct: 17 DTKLHNAVRNGETEVVEFLLNHGANIQARDEDGDTPLHIAVF--CRQVDVANF--FLSHG 72
Query: 146 ADCSAKDNEGKTPLDHLSNGPGSAKLR-ELLLWH 178
A+ A++N G+TPL H + G A +LLL H
Sbjct: 73 ANIEAENNNGETPL-HYAASYGEAPFHSKLLLSH 105
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G++ + LL ++ E N TPLH +A + E+ + LLE +
Sbjct: 186 LHRAALYGEVDIAKLLLSHGANIQAESNE--GYTPLHYTAFDGRTEVCQLLLEQGAS--- 240
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
+ AQ+ G+TPLH+A++ G + A++L+ GA ++ + +G T L +++
Sbjct: 241 -INAQDGEGDTPLHVASREGEIDLARILVEQGADMDTENTHGNTALSIAI 289
>gi|358397980|gb|EHK47348.1| hypothetical protein TRIATDRAFT_317156 [Trichoderma atroviride IMI
206040]
Length = 2221
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 86/150 (57%), Gaps = 9/150 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++G+L Q LL + +N++N TPLHV++ + + +V+ LL +
Sbjct: 2070 LHTAAENGNLQVVQLLLGYKSTKINDKNE-QECTPLHVASAHGQEPVVQLLL---NQQDI 2125
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
EL+A++ G TPL++A G +LLL GA IEAK + G TPLH + SI S +
Sbjct: 2126 ELDAKDYEGYTPLNLAIDGGRFRITRLLLESGADIEAKTHAGHTPLHNA---SI-SGRFK 2181
Query: 137 TVKTLLEYNADCSAKDNEGKTPLD-HLSNG 165
VK LLE+ AD DN+G+T +D L NG
Sbjct: 2182 IVKLLLEHGADRKIADNDGRTAMDLALRNG 2211
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N + + R+ + A +H + D +A + L E + E QTPL + I
Sbjct: 967 NVNVQDRNDQSALLHSAIRGHDAIAKELLTIEGIEINVE--DAYHQTPLLYAVKKEHEGI 1024
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLL-LAHGAFIEAKANNGMTPL 122
VK LL+ G +++ A + +G+TPL AA NG +L+ +G I AK +G TPL
Sbjct: 1025 VKMLLDKEG---IDVNAVDRHGQTPLWWAASNGNKILFQLIHTQNGVDINAKNTSGQTPL 1081
Query: 123 HLSVWYSIRSEDYATVKTLLEY-NADCSAKDNEGKTPL 159
+W + R+ + ATVK LL D + KD E TPL
Sbjct: 1082 ---LW-AARNGNEATVKFLLNVPGIDINTKDRENLTPL 1115
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPL +A + +V+ LL D A++ Y +T L +AAKNG A KLL+ +
Sbjct: 738 GQTPLMWAAKEGHSTVVELLLVTGRGDS---NARDRYSQTSLLLAAKNGQKAATKLLIEN 794
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLS-NG 165
A + A+ N G TPL W+++R+ D ++ LL + D + K+ ++PL + NG
Sbjct: 795 HANLNARDNFGQTPL----WWAVRNGDIPIMELLLAKDGVDINTKNRYDQSPLWWAARNG 850
Query: 166 PGSA 169
G+A
Sbjct: 851 DGAA 854
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 107/247 (43%), Gaps = 51/247 (20%)
Query: 2 QKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
Q N D S++ T ++ ++ G Q LL + + +N +TPLH +
Sbjct: 1986 QNNIDVTSKTIYNQTALYLASERGHFEIVQLLLSKTNTNINSAG-FDGRTPLHSAIFKRH 2044
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL--------------- 105
+VK LL ++ V + +++ G TPLH AA+NG + +LLL
Sbjct: 2045 MSVVKLLL---SHENVNVHSKSDAGWTPLHTAAENGNLQVVQLLLGYKSTKINDKNEQEC 2101
Query: 106 -------AHG-------------AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN 145
AHG ++AK G TPL+L +I + + LLE
Sbjct: 2102 TPLHVASAHGQEPVVQLLLNQQDIELDAKDYEGYTPLNL----AIDGGRFRITRLLLESG 2157
Query: 146 ADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMD-ELENE 204
AD AK + G TPL H ++ G K+ +LLL H +++ A ++ + MD L N
Sbjct: 2158 ADIEAKTHAGHTPL-HNASISGRFKIVKLLLEHGADRKI-----ADNDGRTAMDLALRNG 2211
Query: 205 LSNIVGL 211
S + GL
Sbjct: 2212 HSVVAGL 2218
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL-A 106
QTPL +A N +I+ L+ + V++ A+N G+TPL AA+NG K LL
Sbjct: 1043 GQTPLWWAAS-NGNKILFQLIH--TQNGVDINAKNTSGQTPLLWAARNGNEATVKFLLNV 1099
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL--EYNADCSAKDNEGKTPLDHLSN 164
G I K +TPL W++++ Y V LL N + +++D +G+TPL + +
Sbjct: 1100 PGIDINTKDRENLTPL----WWAVKKV-YKEVARLLLATNNIEVNSRDKDGQTPLLYATK 1154
Query: 165 GPGSAKLRELLL 176
G K+ ELLL
Sbjct: 1155 -QGHKKMVELLL 1165
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL EN + LN R+ QTPL + I++ LL D V++ +N Y ++
Sbjct: 786 AATKLLIENHANLNARDN-FGQTPLWWAVRNGDIPIMELLL---AKDGVDINTKNRYDQS 841
Query: 88 PLHMAAKNGCNEAAKLLLAH-GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
PL AA+NG A LLL G I K +G TPL + + Y V ++L
Sbjct: 842 PLWWAARNGDGAAVNLLLTQDGIDINTKNKSGQTPLGAAA-----QKGYEAVVSMLLAKK 896
Query: 147 DCSA--KDNEGKTPL 159
D D G+TPL
Sbjct: 897 DIEVGIADEYGRTPL 911
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 3 KNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRE---NPSLLNERNPVMAQTPLHVSAGY 58
+N D K T +H A G + LL E +P + ++ +TP+ +AG
Sbjct: 659 RNSDYSQHVPKTITGLHLAAYFGIEKVLENLLGEQGSDPDMSDD----FGRTPISYAAGN 714
Query: 59 NKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNG 118
+ K LL+ + ++ + G+TPL AAK G + +LLL G +N
Sbjct: 715 GYETVAKQLLD---TFAINSDSTDNDGQTPLMWAAKEGHSTVVELLLVTG---RGDSNAR 768
Query: 119 MTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
S+ + ++ A K L+E +A+ +A+DN G+TPL
Sbjct: 769 DRYSQTSLLLAAKNGQKAATKLLIENHANLNARDNFGQTPL 809
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+ TP+ + N I++ LL G+ +V +++++ G TP+ A E LL+ H
Sbjct: 1638 SYTPIMDAILKNNMTIIRLLL---GSTQVNVDSESPTGWTPVRRAIHKANWELLHLLIGH 1694
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA + ++ +G L W + E A L D +++D + +TPL + +
Sbjct: 1695 GAQVNSRDRSGKPLL---AWVAENDEGKAASILLAVNGIDVNSRDRKNRTPLFYAAENGH 1751
Query: 168 SAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGML 226
+ + +LL H + + LE E + +E N+ G L + R+ G++
Sbjct: 1752 ESVVEKLLESHDIDINGQDRLEQAPEARVNASAQVDEEYNMGGQTALSVAARREHNGVV 1810
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMT 120
+I K LL D +++ ++ YG++ L AAKNG + + LL+ + G I AK + +
Sbjct: 1244 DIAKLLL---AKDGIDVNIRDNYGQSVLLWAAKNGYDTSIDLLVKSDGIDINAKDDLNNS 1300
Query: 121 PLHLSVWYSIRSEDYATVKTLLEY-NADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
L L+V A VK LL + N D +D G TPL L+ G+ + ELLL +
Sbjct: 1301 ALSLAV----AKGHTAVVKLLLSHINLDVVNEDGNGHTPL-WLAVETGNETVVELLLEGT 1355
Query: 180 EEQRKRRAL----EACSETKAKMDELENELSNIVGLHELKI---QLRKWAKGMLLDERRK 232
+ R+ +A SE K ++ EL V L+E + L WA G+ +E K
Sbjct: 1356 TKHRESINYGLLKKAASERKVRIFELLTAQEG-VDLNEKDVYGDTLLSWAVGIGHEETVK 1414
Query: 233 AL 234
L
Sbjct: 1415 LL 1416
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL-A 106
QT L +A N V LL ++ +++ ++ G+TPL A + G NE KLLL A
Sbjct: 1828 GQTALWNAASMNLKSTVGLLL---AHEDIDINIKDNSGKTPLLRATELGFNEVVKLLLAA 1884
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA-DCSAKDNEGKTPLDHLSNG 165
G AK + G PL +V+ + + VK +L D +AKD +G+T L L+
Sbjct: 1885 DGIDFMAKDDKGRNPLGTAVF----TNNEMVVKLILAKGIRDINAKDAKGRTIL-FLAAE 1939
Query: 166 PGSAKLRELLL 176
G+ ++ +L L
Sbjct: 1940 VGTPEIFQLFL 1950
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF-IEAKANNGMTPLHLSVWYSIRSED 134
V+L +++YG+T L A G E KLLLA + AK G TPL W ++ +
Sbjct: 1388 VDLNEKDVYGDTLLSWAVGIGHEETVKLLLARTDIDVNAKDTRGGTPL----WRAVDGNN 1443
Query: 135 YATVKTLL-EYNADCSAKDNEGKTPL 159
+ K LL + N D +A++ G +PL
Sbjct: 1444 ISIFKLLLNKENVDINARNYLGVSPL 1469
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
++E + QT L V+A +VK ++ ++ V++ ++ G+T L AA
Sbjct: 1786 VDEEYNMGGQTALSVAARREHNGVVKQII---ASESVDVNLRDDNGQTALWNAASMNLKS 1842
Query: 100 AAKLLLAHGAF-IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA-DCSAKDNEGKT 157
LLLAH I K N+G TPL + VK LL + D AKD++G+
Sbjct: 1843 TVGLLLAHEDIDINIKDNSGKTPLLRATELGFNE----VVKLLLAADGIDFMAKDDKGRN 1898
Query: 158 PL 159
PL
Sbjct: 1899 PL 1900
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++GD A LL ++ +N +N QTPL +A +V LL +E+
Sbjct: 846 AARNGDGAAVNLLLTQDGIDINTKNK-SGQTPLGAAAQKGYEAVVSMLL---AKKDIEVG 901
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAH-GAFIEAKANNGMTPL 122
+ YG TPL AA+ G LL GA I G TPL
Sbjct: 902 IADEYGRTPLLWAARRGHVAVVGLLYNKVGAGINVMDKTGKTPL 945
>gi|421609165|ref|ZP_16050367.1| stage V sporulation protein K [Rhodopirellula baltica SH28]
gi|408500090|gb|EKK04547.1| stage V sporulation protein K [Rhodopirellula baltica SH28]
Length = 610
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQ R E +E +AK+D L +GL +K Q++ A + ++ R GL
Sbjct: 260 EQDDRTPEERLAEARAKLDRL-------IGLDAIKNQIQTLANFLAMERHRAKEGLPT-T 311
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+ HMAF+GNPGTGKT VARI+ + +G+L + E R+ LV E+ G TGPKT
Sbjct: 312 KPSLHMAFVGNPGTGKTTVARIIAEIYGGLGVLEKGHLVETDRSGLVAEYAGQTGPKTNA 371
Query: 301 RVGHLLSEI 309
++ L +
Sbjct: 372 KIDEALDGV 380
>gi|304404432|ref|ZP_07386093.1| AAA ATPase central domain protein [Paenibacillus curdlanolyticus
YK9]
gi|304346239|gb|EFM12072.1| AAA ATPase central domain protein [Paenibacillus curdlanolyticus
YK9]
Length = 358
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+++ EL +VGL +K + + + + + R GL GA HM F GNPGTGKT +
Sbjct: 77 DIQKELDVMVGLDNVKSLVYEIYAMLQIAQMRSEAGLNGGAH-VYHMIFKGNPGTGKTTI 135
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
ARI+ +LL +G+L + EV+R DLVGE++GHT KTR V
Sbjct: 136 ARIVAKLLQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRDLV 178
>gi|323528280|ref|YP_004230432.1| CbbX protein [Burkholderia sp. CCGE1001]
gi|407709128|ref|YP_006792992.1| CbbX protein [Burkholderia phenoliruptrix BR3459a]
gi|323385282|gb|ADX57372.1| CbbX protein [Burkholderia sp. CCGE1001]
gi|407237811|gb|AFT88009.1| CbbX protein [Burkholderia phenoliruptrix BR3459a]
Length = 332
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R++LGL GA P HM F GNPGTGKT VA +
Sbjct: 30 DLVGLAPVKTRIREIAAHLLVERARESLGLASGA--PTLHMCFSGNPGTGKTTVALRMAE 87
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 88 VLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 121
>gi|91777682|ref|YP_552890.1| CbbX-like protein AAA ATPase [Burkholderia xenovorans LB400]
gi|91690342|gb|ABE33540.1| CbbX-like protein, putative AAA ATPase [Burkholderia xenovorans
LB400]
Length = 349
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R +LGL GA P HM F GNPGTGKT VA +
Sbjct: 56 DLVGLAPVKTRIREIAAHLLVERARDSLGLAGGA--PTLHMCFSGNPGTGKTTVALRMAE 113
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 114 VLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 147
>gi|312112802|ref|YP_004010398.1| CbbX protein [Rhodomicrobium vannielii ATCC 17100]
gi|311217931|gb|ADP69299.1| CbbX protein [Rhodomicrobium vannielii ATCC 17100]
Length = 308
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D+L+ EL +GL +K +LR+ A +L++ RK LGL V HM+F GNPGTGKT
Sbjct: 32 LDQLDREL---IGLKPVKTRLREIAALLLVERARKRLGL-VNEAPTLHMSFTGNPGTGKT 87
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + +L+ +G + ++ V R DLVG+++GHT PKT+
Sbjct: 88 TVAMRMANILHRLGYVRRGQLVSVTRDDLVGQYIGHTAPKTK 129
>gi|196048014|ref|ZP_03115192.1| stage V sporulation protein K [Bacillus cereus 03BB108]
gi|196021270|gb|EDX59999.1| stage V sporulation protein K [Bacillus cereus 03BB108]
Length = 550
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
LENEL+ ++G E+K +R + +++ RK L LK + HM F G+PG GKT A
Sbjct: 288 LENELNKLIGNEEVKNLIRSLEDQIYINQERKKLNLK-NTEQSLHMVFKGSPGVGKTTFA 346
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
RI+ +LL +G+L T + EV R+DLV +VG T KT+
Sbjct: 347 RIVAQLLKELGVLKTGHLVEVDRSDLVAGYVGQTALKTK 385
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
E S ++GL + K L + + R G V + + H FLGN G GKT ARIL
Sbjct: 25 EASKLIGLRKFKDFLIELVALVEFQNERAQKGFSV-SNQSFHTVFLGNAGVGKTTAARIL 83
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
++LY +GI+ V EV R+DLV E+VG T KT+
Sbjct: 84 AKILYGLGIVQNANVVEVSRSDLVSEYVGQTAAKTK 119
>gi|354582786|ref|ZP_09001687.1| AAA ATPase central domain protein [Paenibacillus lactis 154]
gi|353199078|gb|EHB64544.1| AAA ATPase central domain protein [Paenibacillus lactis 154]
Length = 327
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
E++ EL +VGL ++K + + + + + R GL G HM F GNPGTGKT
Sbjct: 54 FQEIQKELDQLVGLDQIKELVFEIYALLQVAQMRSEAGLLSGGH-VFHMIFKGNPGTGKT 112
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VARI+ +L +G+L + EV+R DLVGE++GHT KTR V L I +
Sbjct: 113 TVARIIAKLFQKMGVLNKGHLVEVERADLVGEYIGHTAQKTRDLVKKALGGILFI 167
>gi|220911007|ref|YP_002486316.1| ATPase AAA [Arthrobacter chlorophenolicus A6]
gi|219857885|gb|ACL38227.1| AAA ATPase central domain protein [Arthrobacter chlorophenolicus
A6]
Length = 344
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E++ EL ++VGL +K Q+R + + RRKA GL A H+ FLGNPGTGKT
Sbjct: 48 LSEVQAELDSLVGLETVKEQVRALVALLQVQARRKAHGLPEVATSQ-HLVFLGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR+L + VG+L + EV R+ LVG++VG T KT R + L + +
Sbjct: 107 TVARLLAEMYRAVGLLQKGHLVEVDRSGLVGQYVGQTAIKTDRVIRRALDGVLFI 161
>gi|356531509|ref|XP_003534320.1| PREDICTED: ankyrin-2-like [Glycine max]
Length = 249
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 13 KPAT---IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
KP+T +H A+SGDL+A +L NP +N R+ ++TPLH++A +AE+V L +
Sbjct: 6 KPSTADELHMAARSGDLIAVNSILASNPLAVNSRDK-HSRTPLHLAAFSGQAEVVTYLSK 64
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
K ++ A M +H A++ G E + LL+ GA ++A GMT LH Y+
Sbjct: 65 H----KADVGASAMDDMAAIHFASQKGHLEVVRALLSAGASLKAATRKGMTSLH----YA 116
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
++ VK L + A AK GKTPLD +NG
Sbjct: 117 VQGSHMELVKYLAKKGASLGAKTKAGKTPLDLATNG 152
>gi|334340548|ref|YP_004545528.1| AAA ATPase [Desulfotomaculum ruminis DSM 2154]
gi|334091902|gb|AEG60242.1| AAA ATPase central domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 319
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 47/68 (69%)
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGH 304
HM F GNPGTGKT VARI+GRL +G+LP + EV+R DLVGE++GHT KTR ++
Sbjct: 96 HMIFKGNPGTGKTTVARIIGRLFKEMGVLPKGHLIEVERADLVGEYIGHTAAKTRDQIKK 155
Query: 305 LLSEITCL 312
L I +
Sbjct: 156 ALGGILFI 163
>gi|298490054|ref|YP_003720231.1| AAA ATPase ['Nostoc azollae' 0708]
gi|298231972|gb|ADI63108.1| AAA ATPase central domain protein ['Nostoc azollae' 0708]
Length = 312
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
S + +D+L+ EL VGL +K ++++ A +L+D RK+LGL GA P HM FLG
Sbjct: 29 SHIQDILDKLDQEL---VGLKSVKNKIKEMAALLLVDRIRKSLGLTAGA--PSLHMTFLG 83
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
NPG GKT VA + +LY + + + V V R DLVG+ +G T PKTR
Sbjct: 84 NPGMGKTTVAMRMAEILYRLEYIRKENVMLVTRDDLVGQGIGQTAPKTR 132
>gi|296133004|ref|YP_003640251.1| ATPase AAA [Thermincola potens JR]
gi|296031582|gb|ADG82350.1| AAA ATPase central domain protein [Thermincola potens JR]
Length = 333
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 10/128 (7%)
Query: 181 EQRKRRALEACSETKAKMD---ELENELSNIVGLHELKI---QLRKWAKGMLLDERRKAL 234
E+ +++ + E ++D E+ +EL+ +VGL +K ++R + K L E + L
Sbjct: 39 EKNRKKFKDYAKEESVQIDREQEILDELNQMVGLAPVKKIVNEIRAFVKIQKLREEERLL 98
Query: 235 GLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
+ HM F GNPGTGKT VAR+ GRL +G+L + E++R DLVGE++GHT
Sbjct: 99 T----EPQALHMIFKGNPGTGKTTVARVFGRLFKEIGVLSKGHLLEIERADLVGEYIGHT 154
Query: 295 GPKTRRRV 302
KTR ++
Sbjct: 155 AQKTRDQI 162
>gi|322695294|gb|EFY87105.1| ankyrin 2,3/unc44 [Metarhizium acridum CQMa 102]
Length = 1543
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 89/162 (54%), Gaps = 14/162 (8%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A IH +G A + +L ++ L ++R TPLH++A + +I K L+ N
Sbjct: 1217 AAIHLAVLAGKQRAVE-ILVDDKDLCDKR----GMTPLHIAAACGRVDIAKILI----NS 1267
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
K ++EA N TPLH A +G AK LLA GA +EAK + TPLH +V E+
Sbjct: 1268 KADIEAGNWGKGTPLHQAVYSGEVGVAKFLLAVGANLEAKTMSNKTPLHAAV----EGEN 1323
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
VK LL+ +AD AK + +TPL +++ GSAK+ +LLL
Sbjct: 1324 VDMVKLLLDIDADIEAKTSWNETPL-YIAVERGSAKMVKLLL 1364
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 13 KPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPG 72
K +H SG++ + LL +L E + +TPLH + ++VK LL
Sbjct: 1278 KGTPLHQAVYSGEVGVAKFLLAVGANL--EAKTMSNKTPLHAAVEGENVDMVKLLL---- 1331
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRS 132
+ ++EA+ + ETPL++A + G + KLLL GA +E K TPLH +V +
Sbjct: 1332 DIDADIEAKTSWNETPLYIAVERGSAKMVKLLLEAGANVEVKTMLDETPLHAAV----KG 1387
Query: 133 EDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
VK LLE A+ A D KTPL HL++
Sbjct: 1388 GKEKMVKMLLEAGANTMATDKSKKTPL-HLAS 1418
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 28/151 (18%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL+++ A++VK LLE N +E + M ETPLH A K G + K+LL G
Sbjct: 1345 ETPLYIAVERGSAKMVKLLLEAGAN----VEVKTMLDETPLHAAVKGGKEKMVKMLLEAG 1400
Query: 109 AFIEAKANNGMTPLHL-----------------------SVWYSIRSEDYATVKTLLEYN 145
A A + TPLHL ++ +I E+ VK LLE+
Sbjct: 1401 ANTMATDKSKKTPLHLASKVEINKLLLAAGATIDEVNITALHQAIYREELKRVKELLEHG 1460
Query: 146 ADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AD A + PL L+ G A+L + L+
Sbjct: 1461 ADVKALAMRDR-PLLPLAVRIGKAELLKTLI 1490
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 50 TPLHVSAGYNKAEIVKSL--LEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
TPLH +A+ V +L + + ++E++ +++ G T LH A C +A + L+
Sbjct: 1094 TPLHYLVSTREADAVYTLRRIRCIPSYQLEIDKKDLRGWTALHYACWYSCRDAVRELIQI 1153
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLE 143
GA I + +G +P H ++ Y ++ +LE
Sbjct: 1154 GASISCQGFDGASPFHCAIRYDENDKNNDNSNEILE 1189
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 40/163 (24%)
Query: 42 ERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAA 101
E ++ +TPLH + K ++VK LLE N A + +TPLH+A+K N
Sbjct: 1371 EVKTMLDETPLHAAVKGGKEKMVKMLLEAGANTM----ATDKSKKTPLHLASKVEIN--- 1423
Query: 102 KLLLAHGAFIEAKANNGMTPLHLSVW-----------------------------YSIRS 132
KLLLA GA I+ +T LH +++ ++R
Sbjct: 1424 KLLLAAGATID---EVNITALHQAIYREELKRVKELLEHGADVKALAMRDRPLLPLAVRI 1480
Query: 133 EDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+KTL+E AD A + EG+ + +N G +L ++L
Sbjct: 1481 GKAELLKTLIEAGADLGAVNEEGENAFEE-ANREGKVELAQML 1522
>gi|170690072|ref|ZP_02881239.1| CbbX protein [Burkholderia graminis C4D1M]
gi|170144507|gb|EDT12668.1| CbbX protein [Burkholderia graminis C4D1M]
Length = 324
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R++LGL GA P HM F GNPGTGKT VA +
Sbjct: 30 DLVGLVPVKTRIREIAAHLLVERARESLGLASGA--PTLHMCFSGNPGTGKTTVALRMAE 87
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 88 VLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 121
>gi|116670421|ref|YP_831354.1| ATPase central domain-containing protein [Arthrobacter sp. FB24]
gi|116610530|gb|ABK03254.1| AAA ATPase, central domain protein [Arthrobacter sp. FB24]
Length = 344
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E++ EL +VGL +K Q+R + + RRKA GL A H+ FLGNPGTGKT
Sbjct: 48 LSEVQAELDALVGLETVKEQVRALVALLQVQARRKAHGLPEVAT-SQHLVFLGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VAR+L + VG+L + EV R+ LVG+FVG T KT R +
Sbjct: 107 TVARLLAEMYRAVGLLQKGHLVEVDRSGLVGQFVGATAIKTDRVI 151
>gi|353328673|ref|ZP_08971000.1| ankyrin repeat domain protein [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
gi|321272303|gb|ADW80188.1| ankyrin repeat protein [Wolbachia endosymbiont wVitA of Nasonia
vitripennis phage WOVitA1]
gi|321272355|gb|ADW80236.1| ankyrin repeat protein [Wolbachia endosymbiont wVitB of Nasonia
vitripennis phage WOVitB]
Length = 946
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL N S +N +N + TPLH +A EIVK LL+ N ++A+N YG T
Sbjct: 55 AVTKLLLTNGSKVNSKNKKPSNTPLHFAAINGDIEIVKMLLDRGAN----IDAKNQYGRT 110
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY--- 144
PLH A +N E +LLL GA I ++N+G+TPLH++ E V+ LL+Y
Sbjct: 111 PLHNAIENKKMEITELLLNRGANINVRSNDGITPLHIAA----EREYLQIVEYLLKYGAY 166
Query: 145 -NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
N C++ +G PL H + GS ++ LLL
Sbjct: 167 VNCVCTSTWKKGYAPL-HFAVEKGSKEVITLLL 198
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 16 TIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ-TPLHVSAGYNKAEIVKSLLEWPGND 74
T+H AQ G + LL N + + V + TPLH+SA I K LL N
Sbjct: 563 TLHAAAQKGYTKVVEALLEYNADV---NSTVKSDITPLHLSAQQGNEVISKMLLNKGAN- 618
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
A+ G T LH+A + G E K+LL GA + +K + +TPLHL+ +
Sbjct: 619 ---ANAKQKDGITALHIATQKGHKEVVKVLLECGAKVGSKIKSDITPLHLAAQKGYQE-- 673
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
++T+L++ AD +++D G+T L H+++ G ++ LL + +
Sbjct: 674 --IIETILKFGADINSRDEYGRTAL-HIASKEGHEEVVTTLLEYGSD 717
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPG-NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH++A I + LL L+ G TPLH A++ G EA KL L G
Sbjct: 213 TPLHIAAKKGYMHIAEDLLNHGACTHSFTLKE----GYTPLHFASELGNEEAVKLFLNKG 268
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I A N+ +TPLH++ ++ VK LL++ A +D +GKT L HL+ G
Sbjct: 269 ADINASTNSNLTPLHIAT----KTGRKTVVKLLLQHGAKVDNQDKDGKTTL-HLAVEKGY 323
Query: 169 AKLRELLLWHSEE---QRKRRALE 189
+ E +L + + Q R +L+
Sbjct: 324 LMIVEDVLKYCPDINHQSNRSSLK 347
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A +IV+ LL++ + G PLH A + G E LLL+ GA
Sbjct: 143 TPLHIAAEREYLQIVEYLLKYGAYVNCVCTSTWKKGYAPLHFAVEKGSKEVITLLLSRGA 202
Query: 110 FIEAKANNGMTPLHLSV--WYSIRSED---------------------YAT-------VK 139
++ K + +TPLH++ Y +ED +A+ VK
Sbjct: 203 NVDVKGEDSITPLHIAAKKGYMHIAEDLLNHGACTHSFTLKEGYTPLHFASELGNEEAVK 262
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
L AD +A N TPL H++ G + +LLL H
Sbjct: 263 LFLNKGADINASTNSNLTPL-HIATKTGRKTVVKLLLQH 300
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 26/132 (19%)
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAA-----------------KNGCNEAAKLL 104
EIV++LL+ ++ A + YG T LH A N E AKLL
Sbjct: 491 EIVEALLQHD----TDINASDKYGRTALHFTALSESEGFFGFLTNEDPDINIKGEIAKLL 546
Query: 105 LAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
L+ GA I A+ NG+T LH + V+ LLEYNAD ++ TPL HLS
Sbjct: 547 LSKGANINAQTKNGITTLHAAAQKGYTK----VVEALLEYNADVNSTVKSDITPL-HLSA 601
Query: 165 GPGSAKLRELLL 176
G+ + ++LL
Sbjct: 602 QQGNEVISKMLL 613
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 44 NPVMAQTP--LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAA 101
NP A P LH + +I++ LL++ + + G TPLH AAKN E A
Sbjct: 372 NPEDANNPKLLHAAVEKGYLKIIEDLLKYGADVNTLYNSTFKEGFTPLHSAAKNKQEEVA 431
Query: 102 KLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL 142
KLL+++ A I A+ G TP ++Y+I + D K LL
Sbjct: 432 KLLISYEADINAQDKTGKTP----IFYAIENADLKITKLLL 468
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
NQD+ ++ T+H + G L+ + +L+ P + ++ N + +H G +I
Sbjct: 306 NQDKDGKT----TLHLAVEKGYLMIVEDVLKYCPDINHQSNRSSLKIAVH-GYGEEYKKI 360
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN----GM 119
V++LLE+ + + ++ LH A + G + + LL +GA + N+ G
Sbjct: 361 VEALLEYG----LIVNPEDANNPKLLHAAVEKGYLKIIEDLLKYGADVNTLYNSTFKEGF 416
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
TPLH + +++ K L+ Y AD +A+D GKTP+
Sbjct: 417 TPLHSAA----KNKQEEVAKLLISYEADINAQDKTGKTPI 452
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 14 PATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ--TPLHVSAGYNKAEIVKSLLEWP 71
P +H + G L + LL+ + N + TPLH +A + E+ K L+ +
Sbjct: 379 PKLLHAAVEKGYLKIIEDLLKYGADVNTLYNSTFKEGFTPLHSAAKNKQEEVAKLLISY- 437
Query: 72 GNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIR 131
+ ++ AQ+ G+TP+ A +N + KLLL + +AN +P L++ +++
Sbjct: 438 ---EADINAQDKTGKTPIFYAIENADLKITKLLLTN------RANIKDSPDLLNI--AVK 486
Query: 132 SEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ V+ LL+++ D +A D G+T L
Sbjct: 487 KKCIEIVEALLQHDTDINASDKYGRTAL 514
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 5/83 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A EI++++L++ ++ +++ YG T LH+A+K G E LL +G+
Sbjct: 661 TPLHLAAQKGYQEIIETILKFGA----DINSRDEYGRTALHIASKEGHEEVVTTLLEYGS 716
Query: 110 FIEAKANNGMTPLHLSVWYSIRS 132
I + N TPL S IRS
Sbjct: 717 DINITSRNNHTPLD-SAMVGIRS 738
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
K EI K LL N + AQ G T LH AA+ G + + LL + A + + + +
Sbjct: 539 KGEIAKLLLSKGAN----INAQTKNGITTLHAAAQKGYTKVVEALLEYNADVNSTVKSDI 594
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
TPLHLS + + K LL A+ +AK +G T L H++ G ++ ++LL
Sbjct: 595 TPLHLSA----QQGNEVISKMLLNKGANANAKQKDGITAL-HIATQKGHKEVVKVLL 646
>gi|392943328|ref|ZP_10308970.1| AAA+ family ATPase [Frankia sp. QA3]
gi|392286622|gb|EIV92646.1| AAA+ family ATPase [Frankia sp. QA3]
Length = 569
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L EL +++GL +K ++R + ++E R+A GL V A H+ F G+PGTGKT V
Sbjct: 304 KLLAELESMIGLAAVKAEVRAIIDELRVNEWRRAAGLGVSAV-SHHLIFAGSPGTGKTTV 362
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI G LL +G+LP EV R DLVG++VG T P+T
Sbjct: 363 ARIYGELLRALGVLPGGTFREVSRRDLVGQYVGATAPQT 401
>gi|311033220|ref|ZP_07711310.1| AAA family ATPase [Bacillus sp. m3-13]
Length = 1348
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 70/118 (59%), Gaps = 7/118 (5%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR-----PP 244
+ S T ++ + +E+ +++G+ LK +R+ + +++ + +LG VG+ P
Sbjct: 783 SASVTNPELQTILDEIDSLIGMEPLKQDIREMITLIEVNKLKASLG--VGSPEQVMPAAP 840
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
H GNPGTGKT VA++ G+L +G+L V +V R LVGEF+GHT PKT+ ++
Sbjct: 841 HTVLYGNPGTGKTTVAKLFGKLYKAMGLLEKGHVVQVNREKLVGEFIGHTAPKTKGKI 898
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
H GNPGTGKT V+RI+ + +G+L + EV R L+G VG +
Sbjct: 1125 HTVLRGNPGTGKTEVSRIISNIYKALGVLERGSLIEVNRDKLIGTHVGES 1174
>gi|385203930|ref|ZP_10030800.1| putative Rubsico expression protein CbbX [Burkholderia sp. Ch1-1]
gi|385183821|gb|EIF33095.1| putative Rubsico expression protein CbbX [Burkholderia sp. Ch1-1]
Length = 347
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R +LGL GA P HM F GNPGTGKT VA +
Sbjct: 56 DLVGLAPVKTRIREIAAHLLVERARDSLGLAGGA--PTLHMCFSGNPGTGKTTVALRMAE 113
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 114 VLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 147
>gi|46309261|dbj|BAD15116.1| cfxQ [Heterosigma akashiwo]
Length = 287
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S+ + +D LE+EL +GL +K ++R+ A +L+D+ RK LGL V + HM+F G+
Sbjct: 23 SQIQRVIDILESEL---IGLEPVKSRIREIAALLLVDKLRKNLGL-VSSSPGLHMSFTGS 78
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + +LY +G + V R DLVG+++GHT PKT+
Sbjct: 79 PGTGKTTVALRMADILYKLGYSRKGHLITVTRDDLVGQYIGHTAPKTK 126
>gi|342215607|ref|ZP_08708254.1| stage V sporulation protein K [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341586497|gb|EGS29897.1| stage V sporulation protein K [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 332
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP----HMAFLGNPGTGKTMV 259
EL+++VGL +K Q++ L ++ + G+ PP HMAF GNPGTGKT V
Sbjct: 70 ELNSLVGLESVKKQVQAIKDRALFNQLLEEKGMI-----PPALSYHMAFTGNPGTGKTTV 124
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARILG++ +GI +D+ E R+ LVG +VG T PKT
Sbjct: 125 ARILGKIFKNLGITSSDKFVEADRSALVGSYVGQTAPKT 163
>gi|352094682|ref|ZP_08955853.1| CbbX protein [Synechococcus sp. WH 8016]
gi|351681022|gb|EHA64154.1| CbbX protein [Synechococcus sp. WH 8016]
Length = 316
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-- 244
A A S + +L+ EL +GL +K ++R+ A +L+D R+ L L+ A P
Sbjct: 18 AAYADSGVAEVLQQLDQEL---IGLRPVKTRIREIAALLLVDRARQQLDLQSTA---PGL 71
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGH 304
HM+F G PGTGKT VA+ + ++L+ +G L V V R DLVG++VGHT PKTR V
Sbjct: 72 HMSFTGRPGTGKTTVAKRISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMVKR 131
Query: 305 LLSEITCL 312
L + +
Sbjct: 132 ALGGVLFI 139
>gi|255639757|gb|ACU20172.1| unknown [Glycine max]
Length = 216
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 13 KPAT---IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
KP+T +H A+SGDL+A +L NP +N R+ ++TPLH++A +AE+V L +
Sbjct: 6 KPSTADELHTAARSGDLIAVNSILASNPLAVNSRDK-HSRTPLHLAAFSGQAEVVTYLCK 64
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
K ++ A M +H A++ G E + LL+ GA ++A GMT LH Y+
Sbjct: 65 Q----KADVGASAMDDMAAIHFASQKGHLEVVRALLSAGASLKATTRKGMTSLH----YA 116
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
++ VK L + A+ AK GKTPLD +N
Sbjct: 117 VQGSHMELVKYLAKKGANLGAKTKAGKTPLDLATN 151
>gi|317130403|ref|YP_004096685.1| ATPase AAA [Bacillus cellulosilyticus DSM 2522]
gi|315475351|gb|ADU31954.1| AAA ATPase central domain protein [Bacillus cellulosilyticus DSM
2522]
Length = 493
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
+E + + ALE +E A +++ +L ++GL ++K +++ + +E RK G K
Sbjct: 186 NEREDLKDALEKTNEI-ASLEKAMAQLDELIGLTDMKRKIKDITNWVTFNELRKEQGFK- 243
Query: 239 GARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
HM F GNPGTGKT VARI+ +L VG+L + EV R+DLV E++G T KT
Sbjct: 244 KEEISLHMIFSGNPGTGKTTVARIVANILQAVGVLSKGHLVEVGRSDLVAEYIGQTAVKT 303
Query: 299 RRRV 302
R+
Sbjct: 304 MNRI 307
>gi|389872739|ref|YP_006380158.1| rubisco accessory protein CbbX, AAA ATPase [Advenella kashmirensis
WT001]
gi|388537988|gb|AFK63176.1| rubisco accessory protein CbbX, AAA ATPase [Advenella kashmirensis
WT001]
Length = 322
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
R A E A + +L+ EL VGL +K +++ A +L+D+ R GL+ GA
Sbjct: 18 RNSTASEDRQAIAATLQQLDREL---VGLVPVKQRIQDIAALLLVDKLRAERGLRTGA-- 72
Query: 243 PP-HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
P HM+F GNPGTGKT VA + ++L+ +G L + V R DLVG+++GHT PKT+
Sbjct: 73 PSLHMSFTGNPGTGKTTVAMRMAQILHQLGYLRRGHLVAVTRDDLVGQYIGHTAPKTK 130
>gi|126031029|pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
gi|126031030|pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
gi|385867791|pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
gi|385867792|pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
gi|385867796|pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
gi|385867797|pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
gi|385867801|pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
gi|385867802|pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + V+ TPLH++A + EIV+ LL+ + ++ A + G TPLH
Sbjct: 31 RILMANGADVNAAD-VVGWTPLHLAAYWGHLEIVEVLLK----NGADVNAYDTLGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL +GA + AK +NG+TPLHL+ V+ LL+Y AD +A
Sbjct: 86 LAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAA----NRGHLEIVEVLLKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISINNGNEDLAEIL 165
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A G TPLHL+ ++ V+ LL+ AD +A
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWG----HLEIVEVLLKNGADVNAY 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G TPL HL+ G ++ E+LL
Sbjct: 77 DTLGSTPL-HLAAHFGHLEIVEVLL 100
>gi|375308890|ref|ZP_09774172.1| ATPase AAA [Paenibacillus sp. Aloe-11]
gi|390453610|ref|ZP_10239138.1| stage V sporulation protein K [Paenibacillus peoriae KCTC 3763]
gi|375079102|gb|EHS57328.1| ATPase AAA [Paenibacillus sp. Aloe-11]
Length = 327
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 189 EACSETKAK--------MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EA + TK++ E++ EL ++VGL +K + + + + R GL A
Sbjct: 39 EAAASTKSQALPQYLSLYQEIQKELDHLVGLDNIKDLVFEVYAFLQITHMRTDAGLLSNA 98
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
HM F GNPGTGKT VARI+ ++L +G+L + EV+R DLVGE++GHT KTR
Sbjct: 99 H-VYHMIFKGNPGTGKTTVARIIAKMLQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRD 157
Query: 301 RV 302
V
Sbjct: 158 LV 159
>gi|392960664|ref|ZP_10326130.1| AAA ATPase central domain protein [Pelosinus fermentans DSM 17108]
gi|421054578|ref|ZP_15517545.1| AAA ATPase central domain protein [Pelosinus fermentans B4]
gi|421057360|ref|ZP_15520204.1| AAA ATPase central domain protein [Pelosinus fermentans B3]
gi|421065501|ref|ZP_15527242.1| AAA ATPase central domain protein [Pelosinus fermentans A12]
gi|421071441|ref|ZP_15532559.1| AAA ATPase central domain protein [Pelosinus fermentans A11]
gi|392440680|gb|EIW18349.1| AAA ATPase central domain protein [Pelosinus fermentans B4]
gi|392447068|gb|EIW24331.1| AAA ATPase central domain protein [Pelosinus fermentans A11]
gi|392454800|gb|EIW31619.1| AAA ATPase central domain protein [Pelosinus fermentans DSM 17108]
gi|392458755|gb|EIW35249.1| AAA ATPase central domain protein [Pelosinus fermentans A12]
gi|392463268|gb|EIW39238.1| AAA ATPase central domain protein [Pelosinus fermentans B3]
Length = 188
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGN 251
+ +++E+ EL +++GL E+K +R+ + + RR L P HM F GN
Sbjct: 44 QKRIEEILYELDHLIGLSEVKKLVREIYAFIEIQRRRVQEKLNT----EPLVLHMIFKGN 99
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PGTGKT VAR+LG++ +G+L + EV+R DLVGE++GHT KTR ++
Sbjct: 100 PGTGKTTVARLLGQIFREIGVLQRGHLIEVERADLVGEYIGHTAQKTREQL 150
>gi|339008301|ref|ZP_08640874.1| stage V sporulation protein K [Brevibacillus laterosporus LMG
15441]
gi|338774101|gb|EGP33631.1| stage V sporulation protein K [Brevibacillus laterosporus LMG
15441]
Length = 324
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
N+L ++GL E K+ + + + + R LK ++ HM F G+PGTGKT VARI
Sbjct: 57 NDLEKMIGLDEAKLVMYEIYALLRTNRERAKHQLKT-EQQVYHMVFKGSPGTGKTTVARI 115
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G++L +GIL + EV+R DLVGEF+GHT KTR
Sbjct: 116 FGKVLKEMGILSKGHLIEVERADLVGEFIGHTAQKTR 152
>gi|123464740|ref|XP_001317129.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121899855|gb|EAY04906.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 766
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N E+V+ LL ++ A++ GETPLH AAKN C E A+ L++HGA
Sbjct: 367 TALHLAANINSEEVVELLLSHGA----DVNAKDKEGETPLHHAAKNNCKETAEFLISHGA 422
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ AK N TPLH + + + T + L+ + D ++KD E KTPL H + S
Sbjct: 423 DVNAKDKNNKTPLHKTTTNNCKE----TAEILISHGVDVNSKDKEEKTPLHHAAKN-NSI 477
Query: 170 KLRELLLWH 178
+ E L+ H
Sbjct: 478 ETAEYLISH 486
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 14/147 (9%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
L+ EN + + ++ T +H ++ N EI + L+ + V++ +N Y ET LH
Sbjct: 288 LMNENIDI--SKISLIGCTAIHYASVGNCKEIAEFLI----SHGVDINVKNDYNETALHY 341
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
+ E ++L++HG I K +G T LHL+ +I SE+ V+ LL + AD +AK
Sbjct: 342 SPY---KETTEVLISHGIDINWKQKHGYTALHLAA--NINSEE--VVELLLSHGADVNAK 394
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWH 178
D EG+TPL H + + E L+ H
Sbjct: 395 DKEGETPLHHAAKN-NCKETAEFLISH 420
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 13/178 (7%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
M +N D S T A G+ L + +N +N +T LH S
Sbjct: 289 MNENIDISKISLIGCTAIHYASVGNCKEIAEFLISHGVDINVKND-YNETALHYSPYKET 347
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
E++ S +++ + +G T LH+AA E +LLL+HGA + AK G T
Sbjct: 348 TEVLIS-------HGIDINWKQKHGYTALHLAANINSEEVVELLLSHGADVNAKDKEGET 400
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
PLH ++ ++ T + L+ + AD +AKD KTPL H + + E+L+ H
Sbjct: 401 PLH----HAAKNNCKETAEFLISHGADVNAKDKNNKTPL-HKTTTNNCKETAEILISH 453
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 34/168 (20%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLL---------EWP 71
A G L L N + +N RN V +TPLH++ N ++ + LL +
Sbjct: 594 AAYGKLKITVEFLIANGANVNARNNV-EKTPLHLATKGNGKKVAEMLLCHGADINAKDAK 652
Query: 72 GNDKVELEAQNMY--------------------GETPLHMAAKNGCNEAAKLLLAHGAFI 111
GN + L A + + G T LH+A K E +K+L++HGA +
Sbjct: 653 GNTSLCLNAHSFHQKITNILISHGADINSKNNDGWTALHIAIKEDQTEISKILISHGADV 712
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
K N G TPLH + + +S ++ LL AD + K+ +GKTPL
Sbjct: 713 NVKENKGNTPLHFAAKHYRQS----VIELLLSNGADINPKNKDGKTPL 756
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH + N E + L+ + V++ +++ +TPLH AAKN E A+ L++HG
Sbjct: 432 KTPLHKTTTNNCKETAEILI----SHGVDVNSKDKEEKTPLHHAAKNNSIETAEYLISHG 487
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A + AK +G P ++++I + ++ L+E+ AD K+ G+ L
Sbjct: 488 ADVNAKDKDGNPP----IYWAIMKTNKDIIRLLIEHGADIKLKNKHGRNIL 534
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
K + +K +LE +++ +++ YG TPLH+AA + L+A+GA + A+ N
Sbjct: 562 KDKSIKEVLEILILCGIDINSKDKYGNTPLHLAAYGKLKITVEFLIANGANVNARNNVEK 621
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
TPLHL+ + + LL + AD +AKD +G T L L+ K+ +L+ H
Sbjct: 622 TPLHLAT----KGNGKKVAEMLLCHGADINAKDAKGNTSL-CLNAHSFHQKITNILISHG 676
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRK 220
+ + + + + E + E+S I+ H + +++
Sbjct: 677 ADINSKNN-DGWTALHIAIKEDQTEISKILISHGADVNVKE 716
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++ ++ EI K L+ ++ + G TPLH AAK+ +LLL++GA
Sbjct: 688 TALHIAIKEDQTEISKILISHGA----DVNVKENKGNTPLHFAAKHYRQSVIELLLSNGA 743
Query: 110 FIEAKANNGMTPLHLSV 126
I K +G TPLH +V
Sbjct: 744 DINPKNKDGKTPLHYAV 760
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+A E ++L+ G I +K G TPLHL+ + ++ TV+ L+ A+ +A
Sbjct: 560 LAKDKSIKEVLEILILCGIDINSKDKYGNTPLHLAAYGKLK----ITVEFLIANGANVNA 615
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRA 187
++N KTPL HL+ K+ E+LL H + + A
Sbjct: 616 RNNVEKTPL-HLATKGNGKKVAEMLLCHGADINAKDA 651
>gi|333370917|ref|ZP_08462888.1| stage V sporulation protein K [Desmospora sp. 8437]
gi|332976934|gb|EGK13753.1| stage V sporulation protein K [Desmospora sp. 8437]
Length = 323
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +VGL +K + + + + +RR A GL + + HM F GNPGTGKT VARI+
Sbjct: 50 ELDRLVGLSGIKSFIHEIYAWLTVGKRRSAAGL-MTENQVLHMVFEGNPGTGKTTVARIM 108
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
G LL + IL + EV+R DLVGE++GHT KTR V L I +
Sbjct: 109 GHLLKEMDILSKGHLLEVERADLVGEYIGHTAQKTREHVKQALGGILFI 157
>gi|374632512|ref|ZP_09704886.1| ankyrin repeat-containing protein [Metallosphaera yellowstonensis
MK1]
gi|373526342|gb|EHP71122.1| ankyrin repeat-containing protein [Metallosphaera yellowstonensis
MK1]
Length = 364
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 80/142 (56%), Gaps = 14/142 (9%)
Query: 20 CAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVE 77
A++GDL+ Q LL + +P+ ++ + TPLH +A +VK LLE G D
Sbjct: 14 AAENGDLIKVQTLLEKGADPNAKDD----IGWTPLHFAAYLGHVNVVKILLE-RGADP-- 66
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
A++ G TPLH+AA+ G E K+LL GA AK +NG TPLH++ + D
Sbjct: 67 -NAKDDNGRTPLHIAAQEGDVEIVKILLERGADPNAKDDNGRTPLHIAA----QEGDVEI 121
Query: 138 VKTLLEYNADCSAKDNEGKTPL 159
VK LLE AD +AK+N G TPL
Sbjct: 122 VKILLERGADPNAKNNYGWTPL 143
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLH++A EIVK LLE G D A++ G TPLH+AA+ G E K+LL
Sbjct: 73 GRTPLHIAAQEGDVEIVKILLE-RGADP---NAKDDNGRTPLHIAAQEGDVEIVKILLER 128
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
GA AK N G TPLH + + V+ LLE AD DN G PLD+
Sbjct: 129 GADPNAKNNYGWTPLHDAAYRG----HVDVVRVLLERGADPWIADNGGHIPLDY 178
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 17 IHGCAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
+H AQ GD+ + LL +P+ ++ +TPLH++A EIVK LLE G D
Sbjct: 77 LHIAAQEGDVEIVKILLERGADPNAKDDN----GRTPLHIAAQEGDVEIVKILLE-RGAD 131
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRS 132
A+N YG TPLH AA G + ++LL GA N G PL + +IRS
Sbjct: 132 P---NAKNNYGWTPLHDAAYRGHVDVVRVLLERGADPWIADNGGHIPLDYAKDSAIRS 186
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+NG + LL GA AK + G TPLH + + VK LLE AD +AK
Sbjct: 14 AAENGDLIKVQTLLEKGADPNAKDDIGWTPLHFAAYLG----HVNVVKILLERGADPNAK 69
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D+ G+TPL H++ G ++ ++LL
Sbjct: 70 DDNGRTPL-HIAAQEGDVEIVKILL 93
>gi|421874335|ref|ZP_16305941.1| ATPase associated with various cellular activities family protein
[Brevibacillus laterosporus GI-9]
gi|372456766|emb|CCF15490.1| ATPase associated with various cellular activities family protein
[Brevibacillus laterosporus GI-9]
Length = 318
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
N+L ++GL E K+ + + + + R LK ++ HM F G+PGTGKT VARI
Sbjct: 51 NDLEKMIGLDEAKLVMYEIYALLRTNRERAKHQLKT-EQQVYHMVFKGSPGTGKTTVARI 109
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G++L +GIL + EV+R DLVGEF+GHT KTR
Sbjct: 110 FGKVLKEMGILSKGHLIEVERADLVGEFIGHTAQKTR 146
>gi|383773634|ref|YP_005452700.1| CbbX protein [Bradyrhizobium sp. S23321]
gi|381361758|dbj|BAL78588.1| CbbX protein [Bradyrhizobium sp. S23321]
Length = 304
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T + +LE EL +GL +K ++R+ A +L++ R+ GL A PP
Sbjct: 14 RKEAEAAGITDT-LQQLEQEL---IGLRPVKDRVRQIASLLLIERIRQRAGL---ASSPP 66
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 67 TLHMSFTGNPGTGKTTVAMRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 123
>gi|145593033|ref|YP_001157330.1| ATPase central domain-containing protein [Salinispora tropica
CNB-440]
gi|145302370|gb|ABP52952.1| AAA ATPase, central domain protein [Salinispora tropica CNB-440]
Length = 564
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+ ++L EL +VGL +K Q+ + ++E R++ GL VG H+ F G PGTGK
Sbjct: 293 RTEQLLAELEAMVGLESVKEQVHALTDEIQVNEWRRSAGLPVGTV-SHHLIFAGTPGTGK 351
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T VARI G LL +G LP EV R DLVG+++GHT KT
Sbjct: 352 TTVARIYGELLAALGALPGGAFREVSRRDLVGQYLGHTAEKT 393
>gi|154245860|ref|YP_001416818.1| CbxX/CfqX monofunctional [Xanthobacter autotrophicus Py2]
gi|154159945|gb|ABS67161.1| CbxX/CfqX monofunctional [Xanthobacter autotrophicus Py2]
Length = 317
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
+E Q AL SE + ELE ++++GL +K ++R+ A +++ R+ LGL
Sbjct: 18 AEGQLDLGALFIESEVPEFLAELE---ADLIGLKPVKRRIREIAAHLVIGRARETLGLTS 74
Query: 239 GARRPP-HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
GA P HMAF GNPGTGKT VA + ++L+ +G + + V R DLVG+++GHT PK
Sbjct: 75 GA--PTLHMAFTGNPGTGKTTVALKMAQILHRLGYVRRGHLVSVTRDDLVGQYIGHTAPK 132
Query: 298 TR 299
T+
Sbjct: 133 TK 134
>gi|325963519|ref|YP_004241425.1| AAA ATPase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469606|gb|ADX73291.1| AAA+ family ATPase [Arthrobacter phenanthrenivorans Sphe3]
Length = 346
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ EL+ EL +VGL +K Q+R + + RRKA GL A H+ FLGNPGTGKT
Sbjct: 48 LSELQAELDALVGLETVKEQVRALVALLQVQARRKAHGLPEVAT-SQHLVFLGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VAR+L + VG+L + EV R+ LVG++VG T KT R +
Sbjct: 107 TVARLLAEMYRAVGLLQKGHLVEVDRSGLVGQYVGATAIKTDRVI 151
>gi|308069363|ref|YP_003870968.1| stage V sporulation protein K [Paenibacillus polymyxa E681]
gi|305858642|gb|ADM70430.1| Stage V sporulation protein K [Paenibacillus polymyxa E681]
Length = 327
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 189 EACSETKAK--------MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EA + TK++ E++ EL ++VGL +K + + + + R GL A
Sbjct: 39 EAVASTKSQALPQYLSLYQEIQKELDHLVGLDNIKDLVFEVYAFLQIAHMRTDAGLLSNA 98
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
HM F GNPGTGKT VARI+ ++L +G+L + EV+R DLVGE++GHT KTR
Sbjct: 99 H-VYHMIFKGNPGTGKTTVARIIAKMLQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRD 157
Query: 301 RV 302
V
Sbjct: 158 LV 159
>gi|87308774|ref|ZP_01090913.1| probable stage V sporulation protein K [Blastopirellula marina DSM
3645]
gi|87288485|gb|EAQ80380.1| probable stage V sporulation protein K [Blastopirellula marina DSM
3645]
Length = 603
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+A + +EL +VGL +K ++++ + + ++R+ GL+ + + H F GNPGT
Sbjct: 252 EASLQAAMSELDALVGLPGVKAEVKRLTAFLKIQQQRRKYGLRT-STQTLHFVFTGNPGT 310
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GKT VARI+G++LY +L + V E R DLVG +VG T KT++++ L +
Sbjct: 311 GKTTVARIVGKILYGFELLKSTNVVECSRADLVGGYVGQTAMKTQKKIESALDGV 365
>gi|421076043|ref|ZP_15537045.1| AAA ATPase central domain protein [Pelosinus fermentans JBW45]
gi|392525902|gb|EIW49026.1| AAA ATPase central domain protein [Pelosinus fermentans JBW45]
Length = 187
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 7/111 (6%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGN 251
+ +++E+ EL +++GL E+K +R+ + + RR L P HM F GN
Sbjct: 44 QKRIEEILYELDHLIGLSEVKKLVREIYAFIEIQRRRVQEKLNT----EPLVLHMIFKGN 99
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PGTGKT VAR+LG++ +G+L + EV+R DLVGE++GHT KTR ++
Sbjct: 100 PGTGKTTVARLLGQIFREIGVLQRGHLIEVERADLVGEYIGHTAQKTREQL 150
>gi|189095297|ref|YP_001936310.1| CbbX [Heterosigma akashiwo]
gi|189095347|ref|YP_001936360.1| CbbX [Heterosigma akashiwo]
gi|157694640|gb|ABV65916.1| putative rubisco expression protein [Heterosigma akashiwo]
gi|157694690|gb|ABV65966.1| putative rubisco expression protein [Heterosigma akashiwo]
gi|157777871|gb|ABV70057.1| putative rubisco expression protein [Heterosigma akashiwo]
gi|157777921|gb|ABV70107.1| putative rubisco expression protein [Heterosigma akashiwo]
Length = 298
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S+ + +D LE+EL +GL +K ++R+ A +L+D+ RK LGL V + HM+F G+
Sbjct: 23 SQIQRVIDILESEL---IGLKPVKSRIREIAALLLVDKLRKNLGL-VSSSPGLHMSFTGS 78
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + +LY +G + V R DLVG+++GHT PKT+
Sbjct: 79 PGTGKTTVALRMADILYKLGYSRKGHLITVTRDDLVGQYIGHTAPKTK 126
>gi|212535284|ref|XP_002147798.1| ankyrin repeat-containing protein, putative [Talaromyces marneffei
ATCC 18224]
gi|210070197|gb|EEA24287.1| ankyrin repeat-containing protein, putative [Talaromyces marneffei
ATCC 18224]
Length = 1506
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
++ LH++A ++ LL PG +EL+AQ+ ETPLH+AAKNG KLLL G
Sbjct: 220 RSALHIAASDRHTRVIPRLLVIPG---IELDAQDENCETPLHLAAKNGSPGTVKLLLEFG 276
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY-NADCSAKDNEGKTPL 159
A + AK G+TPLHL+ + R + +A V+ +L N D A+ N G+TPL
Sbjct: 277 ANVNAKDKKGLTPLHLA---AARRDSFALVEMILTAKNIDVDARANNGRTPL 325
>gi|295698872|ref|YP_003606765.1| CbbX protein [Burkholderia sp. CCGE1002]
gi|295438085|gb|ADG17254.1| CbbX protein [Burkholderia sp. CCGE1002]
Length = 331
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 178 HSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
HS++ L A D L ++VGL +K ++R+ A +L++ R +LGL
Sbjct: 16 HSDDATPHIDLAALYRDSGIGDVLGELDRDLVGLAPVKTRIREVAAHLLVERARASLGLA 75
Query: 238 VGARRPP-HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGP 296
GA P HM F GNPGTGKT VA + +L+ +G + + + V R DLVG+++GHT P
Sbjct: 76 GGA--PTLHMCFSGNPGTGKTTVALRMAEVLHRLGYIRRNHLVSVTRDDLVGQYIGHTAP 133
Query: 297 KTR 299
KTR
Sbjct: 134 KTR 136
>gi|433463876|ref|ZP_20421407.1| stage V sporulation protein K [Halobacillus sp. BAB-2008]
gi|432186950|gb|ELK44316.1| stage V sporulation protein K [Halobacillus sp. BAB-2008]
Length = 313
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
++ ++I+G+ +LK ++++ +L+ ++R+A GLK A+ HM F GNPGTGKT VA
Sbjct: 43 IDEYFASIIGMEDLKRRVKEIYAQVLIAKKREAEGLKASAQ-VLHMVFKGNPGTGKTTVA 101
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
R++ L + +L E R+DLVGE++GHT KT+
Sbjct: 102 RMVAALFNEIDVLEKGHFIEADRSDLVGEYIGHTAQKTK 140
>gi|154415475|ref|XP_001580762.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121914983|gb|EAY19776.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 594
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ T LH++A YN E + L+ N + ++ YG+T LH A +N C E
Sbjct: 330 INEKDD-DGYTALHIAAWYNSKETAEVLISHGAN----INEKDKYGKTALHYAVENNCKE 384
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++L++HGA I K ++G T LH++ WY+ + T + L+ + A+ + KD GKT L
Sbjct: 385 TAEVLISHGANINEKDDDGYTALHIAAWYNSKE----TAEVLISHGANINEKDKYGKTSL 440
Query: 160 DHLSNGPGSAKLRELLLWH 178
H + S + E+L+ H
Sbjct: 441 -HYAAQNCSKETAEVLISH 458
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ T LH++A YN E + L+ N + ++ YG+T LH A +N C E
Sbjct: 264 INEKDD-DGYTALHIAAWYNSKETAEVLISHGAN----INEKDKYGKTALHYAVENNCKE 318
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++L++HGA I K ++G T LH++ WY+ + T + L+ + A+ + KD GKT L
Sbjct: 319 TAEVLISHGANINEKDDDGYTALHIAAWYNSKE----TAEVLISHGANINEKDKYGKTAL 374
Query: 160 DHLSNGPGSAKLRELLLWH 178
H + + E+L+ H
Sbjct: 375 -HYAVENNCKETAEVLISH 392
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N + ++ YG+T LH A +N C E A++L++HG
Sbjct: 206 KTSLHIAALNNSKETAEVLISHGAN----INEKDKYGKTALHYAVENNCKETAEVLISHG 261
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K ++G T LH++ WY+ + T + L+ + A+ + KD GKT L H +
Sbjct: 262 ANINEKDDDGYTALHIAAWYNSKE----TAEVLISHGANINEKDKYGKTAL-HYAVENNC 316
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 317 KETAEVLISH 326
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ T LH++A YN E + L+ N + ++ YG+T LH AA+N E
Sbjct: 396 INEKDD-DGYTALHIAAWYNSKETAEVLISHGAN----INEKDKYGKTSLHYAAQNCSKE 450
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++L++HGA I K +G T LH++ + + T + L+ + A+ + KD GKT L
Sbjct: 451 TAEVLISHGANINEKTQDGETALHIAAL----NNNNETAEVLISHGANINEKDKYGKTSL 506
Query: 160 DHLSNGPGSAKLRELLLWH 178
H + S + E+L+ H
Sbjct: 507 -HYAAQNCSKETAEVLISH 524
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 8/113 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N + ++ YG+T LH AA+N E A++L++HG
Sbjct: 470 ETALHIAALNNNNETAEVLISHGAN----INEKDKYGKTSLHYAAQNCSKETAEVLISHG 525
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
A I K +G T LH++ + + T + L+ + A+ + KDN G+T L +
Sbjct: 526 ANINEKTQDGETALHIAAL----NNNNETAEVLISHGANINEKDNNGQTSLQY 574
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH +A E + L+ N + + GET LH+AA N NE
Sbjct: 495 INEKDK-YGKTSLHYAAQNCSKETAEVLISHGAN----INEKTQDGETALHIAALNNNNE 549
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
A++L++HGA I K NNG T L Y++ ++ TV+ L+ + A
Sbjct: 550 TAEVLISHGANINEKDNNGQTSLQ----YAVENKCKETVEVLISHGA 592
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ SL E+ + + + YG+T LH+AA E A+ L++H A I K + T LH
Sbjct: 151 IPSLFEYFLSRGANINEKFKYGKTALHIAAMFNSKETAEFLISHDANINEKIEDRKTSLH 210
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++ + + T + L+ + A+ + KD GKT L H + + E+L+ H
Sbjct: 211 IAALNNSKE----TAEVLISHGANINEKDKYGKTAL-HYAVENNCKETAEVLISH 260
>gi|90655614|gb|ABD96450.1| probable RuBisCo-expression protein CbbX [uncultured marine type-A
Synechococcus GOM 5D20]
Length = 301
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+++L++EL +GL ++K ++R+ A +L+D+ R+ L L A P HM+F GNPGTGK
Sbjct: 20 LEQLDHEL---IGLVQVKTRIREIAALLLVDQARQQLELPSTA--PSLHMSFTGNPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQKMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|392406333|ref|YP_006442942.1| AAA+ family ATPase [Mycobacterium chubuense NBB4]
gi|390619469|gb|AFM20617.1| AAA+ family ATPase [Mycobacterium chubuense NBB4]
Length = 593
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E E +L +GL +K + K +G++ D R A G VG R HM +G PGT KT
Sbjct: 296 LEESERDLQAFIGLGAVKAHINKLKRGLVYDRRLAARGEAVGERNALHMTLVGPPGTAKT 355
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+AR++G++ + +GIL + + EV R DLVG +G T KT
Sbjct: 356 SIARVMGKMYFGLGILKSPKFIEVSRKDLVGGHIGETEIKT 396
>gi|253577136|ref|ZP_04854457.1| stage V sporulation protein K [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843518|gb|EES71545.1| stage V sporulation protein K [Paenibacillus sp. oral taxon 786
str. D14]
Length = 327
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E++ EL ++VGL +K + + + + R GL + + + HM F GNPGTGKT V
Sbjct: 56 EIQKELDHLVGLDHIKELMYEIYALLQIASMRSEAGL-LSSAQVYHMVFKGNPGTGKTTV 114
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
ARI+ ++ +G+L + EV+R DLVGE++GHT KTR V L I +
Sbjct: 115 ARIVAKMFQRMGVLSKGHLIEVERADLVGEYIGHTAQKTRDLVKKALGGILFI 167
>gi|403380631|ref|ZP_10922688.1| SpoVK [Paenibacillus sp. JC66]
Length = 325
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ EL+++VGL +K + + + +++ R+ GLK +++ HM F GNPGTGKT V
Sbjct: 46 EMIRELNSMVGLENVKELVFRIYAMLKVNQMREKAGLK-PSKQVHHMIFYGNPGTGKTTV 104
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR L +L + +G+L + E R DLVGE++GHT KTR V
Sbjct: 105 ARALAKLFHKMGLLSKGHLIEADRADLVGEYIGHTAQKTRELV 147
>gi|307706327|ref|ZP_07643139.1| stage V sporulation protein K [Streptococcus mitis SK321]
gi|307618245|gb|EFN97400.1| stage V sporulation protein K [Streptococcus mitis SK321]
Length = 621
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
E +LS ++GL E+K+ L++ + R+A G H+ F GNPGTGKT+VAR
Sbjct: 339 EKKLSELIGLEEVKMVLKQQLAYSRVSVMRQAHGFS-NEVLNRHLVFSGNPGTGKTVVAR 397
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+ +LY I+ +++ EV RT+LVGE+VG T PK +R
Sbjct: 398 LFSEILYNNKIIKENKLVEVGRTELVGEYVGQTAPKVKR 436
>gi|148252060|ref|YP_001236645.1| CbbX-like protein [Bradyrhizobium sp. BTAi1]
gi|146404233|gb|ABQ32739.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. BTAi1]
Length = 334
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ S A ++EL+ L +GL +K ++R+ A +L+D RK+ GL A P
Sbjct: 36 RREFES-SGVHAVLEELDRSL---IGLKPVKRRIRETAALLLVDRARKSFGL---AHETP 88
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 89 TLHMSFTGNPGTGKTTVALKMADLLHRLGYIRRGHLVTVTRDDLVGQYIGHTAPKTK 145
>gi|357590529|ref|ZP_09129195.1| stage V sporulation protein K [Corynebacterium nuruki S6-4]
Length = 1123
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL +K +R+ + D + G +R HM F GNPGTGKT VARI+
Sbjct: 864 ELDGMLGLAPVKEWVRQLVNRVTFDREQTRAG-GTTSRPNYHMTFTGNPGTGKTTVARII 922
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
GRL + +GIL + V EV R+DLVG ++GHT +T R
Sbjct: 923 GRLFHELGILDSPTVKEVDRSDLVGSWIGHTEKQTTR 959
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L + GL K ++ + +RR+ GLKV + H FLGNPGTGKT VAR+LG
Sbjct: 591 LMAMTGLASAKTHVQDIIREARARKRRQDQGLKV-QQTTLHSLFLGNPGTGKTTVARLLG 649
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ LY G + D EV R+DLVG +G + KT+
Sbjct: 650 KALYNAGAVEKDIFVEVGRSDLVGMGLGQSAIKTK 684
>gi|58698798|ref|ZP_00373678.1| ankyrin 3 [Wolbachia endosymbiont of Drosophila ananassae]
gi|58534693|gb|EAL58812.1| ankyrin 3 [Wolbachia endosymbiont of Drosophila ananassae]
Length = 617
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 83/153 (54%), Gaps = 13/153 (8%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL N S +N +N + TPLH +A EIVK LL+ N ++A+N YG T
Sbjct: 55 AVTKLLLTNGSKVNSKNKRPSNTPLHFAAINGDIEIVKMLLDRGAN----IDAKNQYGRT 110
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY--- 144
PLH A +N E +LLL GA I ++N+G+TPLH++ E V+ LL+Y
Sbjct: 111 PLHNAIENKKMEITELLLNRGANINVRSNDGITPLHIAA----EREYLQIVEHLLKYGAY 166
Query: 145 -NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
N C++ +G PL H + GS ++ LLL
Sbjct: 167 VNCVCTSTWKKGYAPL-HFAVEKGSKEVITLLL 198
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPG-NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH++A I + LL L+ G TPLH A++ G EA KL L G
Sbjct: 213 TPLHIAAKKGYMHIAEDLLNHGACTHSFTLKE----GYTPLHFASELGNEEAVKLFLNKG 268
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I A N+ +TPLH++ ++ VK LL++ A +D +GKT L HL+ G
Sbjct: 269 ADINASTNSNLTPLHIAT----KTGRKTVVKLLLQHGAKVDNQDKDGKTTL-HLAVEKGY 323
Query: 169 AKLRELLLWHSEE---QRKRRALE 189
+ E +L + + Q R +L+
Sbjct: 324 LMIVEDVLKYCPDINHQSNRSSLK 347
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 31/159 (19%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A +IV+ LL++ + G PLH A + G E LLL+ GA
Sbjct: 143 TPLHIAAEREYLQIVEHLLKYGAYVNCVCTSTWKKGYAPLHFAVEKGSKEVITLLLSRGA 202
Query: 110 FIEAKANNGMTPLHLSV--WYSIRSED---------------------YAT-------VK 139
++ K + +TPLH++ Y +ED +A+ VK
Sbjct: 203 NVDVKGEDSITPLHIAAKKGYMHIAEDLLNHGACTHSFTLKEGYTPLHFASELGNEEAVK 262
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
L AD +A N TPL H++ G + +LLL H
Sbjct: 263 LFLNKGADINASTNSNLTPL-HIATKTGRKTVVKLLLQH 300
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 70/160 (43%), Gaps = 38/160 (23%)
Query: 26 LLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYG 85
LL + +++NP LLN ++ EIV++LL+ ++ A + YG
Sbjct: 467 LLTNRANVKDNPELLN------------IAVKKECIEIVEALLQHD----TDINASDKYG 510
Query: 86 ETPLHMAA-----------------KNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY 128
T LH A N E AKLLL+ GA I A+ NG+T LH +
Sbjct: 511 RTALHFTALSESEGFFGFLTNEDPDINIKGEIAKLLLSKGANINAQTKNGITTLHAAAQK 570
Query: 129 SIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
V+ LLEYNAD ++ TPL HLS G+
Sbjct: 571 GYTK----VVEALLEYNADVNSTVKSDITPL-HLSAQQGN 605
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 54 VSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEA 113
V GY K IV+ LL++ + + + G TPLH AAKN E AKLL+++GA I A
Sbjct: 386 VEKGYLK--IVEDLLKYGADVNTLHNSTSKEGFTPLHSAAKNKQEEVAKLLISYGADINA 443
Query: 114 KANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDN 153
+ G TP ++Y+ + D K LL A+ KDN
Sbjct: 444 QDKTGKTP----IFYATENADLKITKLLLTNRANV--KDN 477
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 18/177 (10%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
NQD+ ++ T+H + G L+ + +L+ P + ++ N + +H G +I
Sbjct: 306 NQDKDGKT----TLHLAVEKGYLMIVEDVLKYCPDINHQSNRSSLKIAVH-GYGEEYKKI 360
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN----GM 119
V++LLE+ V LE N LH A + G + + LL +GA + N+ G
Sbjct: 361 VEALLEY--GLIVNLEDAN--NPKLLHAAVEKGYLKIVEDLLKYGADVNTLHNSTSKEGF 416
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
TPLH + +++ K L+ Y AD +A+D GKTP+ + + K+ +LLL
Sbjct: 417 TPLHSAA----KNKQEEVAKLLISYGADINAQDKTGKTPIFYATEN-ADLKITKLLL 468
>gi|340028809|ref|ZP_08664872.1| ATPase central domain-containing protein [Paracoccus sp. TRP]
Length = 307
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAF 248
S + +D+LE EL +GL +K ++R+ A +L+D R+ LGL A P HM+F
Sbjct: 20 TSGVREILDDLEREL---IGLAPVKQRIRETAALLLVDRARRELGL---AHETPTLHMSF 73
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 74 TGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 124
>gi|319653182|ref|ZP_08007284.1| stage V sporulation protein K [Bacillus sp. 2_A_57_CT2]
gi|317395103|gb|EFV75839.1| stage V sporulation protein K [Bacillus sp. 2_A_57_CT2]
Length = 770
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+EL+ +VGLH +K ++ + + + RK+LG + +M GNPGTGKT +AR+
Sbjct: 232 DELNEMVGLHSVKSRVHDFYRFLKYQNERKSLGFQTKDELSLNMILTGNPGTGKTTIARL 291
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
L ++ + +G+LP + V E R+ LVG FVG T R V
Sbjct: 292 LAKIYHSLGVLPREEVIEADRSQLVGGFVGQTEENVRAAV 331
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
+ +L+ ++GL +K +++ + + + R+ GL V + H F GNPGTGKT VA+
Sbjct: 505 QEQLAQLIGLETVKTEVQNLVSFVKMQQLRRERGLPVVPIQL-HSVFTGNPGTGKTTVAK 563
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
I LL G L + R D V +VG T KT++++
Sbjct: 564 IYAELLEECGFLKRGHLMVASRADFVAGYVGQTAIKTKKKI 604
>gi|310642425|ref|YP_003947183.1| ATPase AAA [Paenibacillus polymyxa SC2]
gi|386041495|ref|YP_005960449.1| stage V sporulation protein K [Paenibacillus polymyxa M1]
gi|309247375|gb|ADO56942.1| AAA ATPase central domain protein [Paenibacillus polymyxa SC2]
gi|343097533|emb|CCC85742.1| stage V sporulation protein K [Paenibacillus polymyxa M1]
Length = 327
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 189 EACSETKAK--------MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EA + TK++ E++ EL ++VGL +K + + + + R GL A
Sbjct: 39 EAVASTKSQALPQYLSLYQEIQKELDHLVGLDNIKELVFEVYAFLQIAHMRTDAGLLSNA 98
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
HM F GNPGTGKT VARI+ ++L +G+L + EV+R DLVGE++GHT KTR
Sbjct: 99 H-VYHMIFKGNPGTGKTTVARIIAKMLQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRD 157
Query: 301 RV 302
V
Sbjct: 158 LV 159
>gi|302391926|ref|YP_003827746.1| ATPase AAA [Acetohalobium arabaticum DSM 5501]
gi|302204003|gb|ADL12681.1| AAA ATPase central domain protein [Acetohalobium arabaticum DSM
5501]
Length = 310
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP--PHMAFL 249
+++K K+ E++ +L +VGL +LK + + + + ++R+ L A P HM F
Sbjct: 39 NDSKEKLKEVKAKLDRLVGLDKLKRLVDELEAFVKIQQKRQENQL---ATEPLVMHMVFK 95
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GNPGTGKT +ARI G L +G+L + EV+R DLVGE++GHT KT+ + L I
Sbjct: 96 GNPGTGKTTIARIFGELFKELGLLSEGHLKEVERADLVGEYIGHTAQKTKDAIEEALGGI 155
Query: 310 TCL 312
+
Sbjct: 156 LFI 158
>gi|198274939|ref|ZP_03207471.1| hypothetical protein BACPLE_01098 [Bacteroides plebeius DSM 17135]
gi|198272386|gb|EDY96655.1| ATPase, AAA family [Bacteroides plebeius DSM 17135]
Length = 628
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 113/256 (44%), Gaps = 21/256 (8%)
Query: 54 VSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEA 113
+ + ++ E+++ L+W KV E + + + + + + LL G +E
Sbjct: 195 LCSHFSLQELLEGSLQW----KVLQEKMDTRKVVLVEVPYMDYSRQESNLLDLLGNLMEQ 250
Query: 114 KANNGMTPLH---LSVWYSIRSEDYATVKTLLE----YNADCSAKDNEGKTPLDHLSNGP 166
K ++G + + Y +R A + E Y D + DN K D +N
Sbjct: 251 KTSSGPIFIFYGTMDSTYQLRRCSTAMSRIFTEENTIYTPDKAENDNSDK---DFPANDL 307
Query: 167 GSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGML 226
E L H+EE + S+ E L +VGL LK LR+
Sbjct: 308 PLPFDEEQPLSHTEEDNPLPEDDTPSDA-------EQALQEMVGLTRLKEDLREARMLAT 360
Query: 227 LDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDL 286
+RR LGL HM FLGNPGTGKTMVA+++G+L + +G+L + E RT L
Sbjct: 361 FMKRRMELGLDTELDNRHHMLFLGNPGTGKTMVAKLIGQLYHQMGLLSSGHTIETCRTKL 420
Query: 287 VGEFVGHTGPKTRRRV 302
VGE++G T R+ +
Sbjct: 421 VGEYIGETEKHIRQAI 436
>gi|294674343|ref|YP_003574959.1| AAA family ATPase [Prevotella ruminicola 23]
gi|294473549|gb|ADE82938.1| ATPase, AAA family [Prevotella ruminicola 23]
Length = 339
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL +K ++R A + L ++R+A GLK A+ H+ F G+PGTGKT VARI+
Sbjct: 70 ELDELIGLGSVKDEVRSLANFVKLQKQREAKGLKT-AKVSYHLVFYGSPGTGKTTVARIV 128
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GR+ +G+L E R L ++VG TGPKT
Sbjct: 129 GRIYKDLGVLKRGHTVETDRAGLCAQYVGQTGPKT 163
>gi|170725433|ref|YP_001759459.1| ATPase central domain-containing protein [Shewanella woodyi ATCC
51908]
gi|169810780|gb|ACA85364.1| AAA ATPase central domain protein [Shewanella woodyi ATCC 51908]
Length = 596
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 62/98 (63%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +++GL +K ++R+ + +++R+ GL + HM F GNPGTGKT++AR++
Sbjct: 328 LDSMIGLKRVKEEVRRLNAMLTYNQQRQQEGLAELEQGAYHMVFTGNPGTGKTVIARLIA 387
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+L+ G+L +V EV R+DLV +++G T PK R V
Sbjct: 388 EMLFDKGVLKNKKVVEVTRSDLVAQYIGQTAPKVRAVV 425
>gi|398821019|ref|ZP_10579512.1| putative Rubsico expression protein CbbX [Bradyrhizobium sp. YR681]
gi|398228320|gb|EJN14449.1| putative Rubsico expression protein CbbX [Bradyrhizobium sp. YR681]
Length = 310
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T + +LE EL +GL +K ++R+ A +L++ R+ GL A PP
Sbjct: 20 RKEAEAAGITDT-LQQLEREL---IGLKPVKSRVRQIASLLLIERIRQRAGL---ASSPP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 129
>gi|89098430|ref|ZP_01171314.1| stage V sporulation protein K [Bacillus sp. NRRL B-14911]
gi|89086979|gb|EAR66096.1| stage V sporulation protein K [Bacillus sp. NRRL B-14911]
Length = 787
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 177 WHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL 236
WH+ Q + E S ++ L++++G+ ++K ++ + K + ++RK LG
Sbjct: 220 WHALFQTEEEVTEEISALES--------LNSMIGMEKVKSRVNDFYKFLKYQKKRKQLGF 271
Query: 237 KVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGP 296
++ HM GNPGTGKT +AR+L ++ + +G+LP + V E R+ LVG +VG T
Sbjct: 272 QIKDEMSLHMILTGNPGTGKTTLARLLAKIYHELGVLPREEVVEADRSQLVGAYVGQTEE 331
Query: 297 KTRRRV 302
R V
Sbjct: 332 NVRSAV 337
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
E +L +VGL +K ++ + + + R+ L H F GNPGTGKT VA+
Sbjct: 512 EKQLEMLVGLGNIKEEVESLISFVKMQQYRRGQNLP-SVPVQLHSVFTGNPGTGKTTVAK 570
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
I LL+ G+L + R+DLV +VG T KT++ +
Sbjct: 571 IYAELLHKCGMLKRGHLIVAGRSDLVAGYVGQTAIKTKKII 611
>gi|325289880|ref|YP_004266061.1| ATPase AAA [Syntrophobotulus glycolicus DSM 8271]
gi|324965281|gb|ADY56060.1| AAA ATPase central domain protein [Syntrophobotulus glycolicus DSM
8271]
Length = 297
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGT 254
K+ E+ EL +++GL +K + + + + + R+ L L P HM F GNPGT
Sbjct: 32 KVKEILTELDDLIGLGTVKNLIYELQAFIEIQKCREKLNL---TSEPTVLHMIFSGNPGT 88
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GKT VARI+G+L +G+L + E +R DLVGE++GHT KTR ++ L I
Sbjct: 89 GKTTVARIVGKLFKEIGVLNKGHILECERADLVGEYIGHTAQKTREQIKKALGGI 143
>gi|115523384|ref|YP_780295.1| ATPase central domain-containing protein [Rhodopseudomonas
palustris BisA53]
gi|115517331|gb|ABJ05315.1| AAA ATPase, central domain protein [Rhodopseudomonas palustris
BisA53]
Length = 306
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L++ RK +GL G P HM+F GNPGTGK
Sbjct: 32 LDQLDREL---IGLKPVKTRIREIAALLLIERLRKQMGLATG--NPTLHMSFTGNPGTGK 86
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 87 TTVALRIASILHKLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 129
>gi|189502556|ref|YP_001958273.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497997|gb|ACE06544.1| hypothetical protein Aasi_1217 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1402
Score = 80.5 bits (197), Expect = 8e-13, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+ G A+ G+L ++L++ + + N PLH +A E+ K L+E
Sbjct: 329 LFGAAKKGNLEVSKQLIQLGAHINAKDNS--GYIPLHKAALNGHLEVAKLLIE----SGA 382
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A+N++G+TPLH AA+ G E AKLL+ GA + AK NNG+TPL+++ E
Sbjct: 383 DVNAKNIHGDTPLHWAAEEGHLEVAKLLIESGADVNAKGNNGITPLYVAA----EEEHLE 438
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
K L+E AD +AK N G TPL
Sbjct: 439 VAKLLIESGADVNAKGNNGITPL 461
Score = 61.6 bits (148), Expect = 4e-07, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 17/157 (10%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A +G L +LL E+ + +N +N + TPLH +A E+ K L+E
Sbjct: 362 LHKAALNGHL-EVAKLLIESGADVNAKN-IHGDTPLHWAAEEGHLEVAKLLIE----SGA 415
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A+ G TPL++AA+ E AKLL+ GA + AK NNG+TPL+++ E
Sbjct: 416 DVNAKGNNGITPLYVAAEEEHLEVAKLLIESGADVNAKGNNGITPLYVAA----EEEHLE 471
Query: 137 TVKTLLEYNA---DCSAKDNEGKTPLDHLSNGPGSAK 170
K L+E A D + N G+ NG G+A+
Sbjct: 472 VAKLLIESGAGQGDAETQYNIGRM----YRNGRGTAQ 504
Score = 56.6 bits (135), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 27/149 (18%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL+V+A E+++ L+ + N + A+N+ G TPL+MAA G + L+ GA
Sbjct: 235 TPLYVAALLGHLELIRYLIAFGAN----VNAKNINGNTPLYMAALKGNLALVRYLIEQGA 290
Query: 110 FIEAKANNGMTPLHLSV----------------------WYSIRSEDYATVKTLLEYNAD 147
I K NNG TPL++++ + + + + K L++ A
Sbjct: 291 DINDKDNNGSTPLYIAILKGHIEVAKQLVILGADVQDNLFGAAKKGNLEVSKQLIQLGAH 350
Query: 148 CSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+AKDN G PL H + G ++ +LL+
Sbjct: 351 INAKDNSGYIPL-HKAALNGHLEVAKLLI 378
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH + +K L+ N V + ++ TPLH AA+ G + A L++ GA +
Sbjct: 171 LHTATEQRDINKIKELV----NAGVNINLKDNNSWTPLHKAAQKGHIDVAAFLISLGADV 226
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ NNG+TPL+++ ++ L+ + A+ +AK+ G TPL
Sbjct: 227 NARDNNGITPLYVAALLG----HLELIRYLIAFGANVNAKNINGNTPL 270
>gi|356496455|ref|XP_003517083.1| PREDICTED: putative ankyrin repeat protein RF_0381-like [Glycine
max]
Length = 251
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 12/155 (7%)
Query: 13 KPAT---IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
KP+T +H A+SGDL+A +L NP +N R+ ++TPLH++A +AE+V L +
Sbjct: 6 KPSTADELHTAARSGDLIAVNSILASNPLAVNSRDK-HSRTPLHLAAFSGQAEVVTYLCK 64
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
K ++ A M +H A++ G E + LL+ GA ++A GMT LH Y+
Sbjct: 65 Q----KADVGASAMDDMAAIHFASQKGHLEVVRALLSAGASLKATTRKGMTSLH----YA 116
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
++ VK L + A+ AK GKTPLD +N
Sbjct: 117 VQGSHMELVKYLAKKGANLGAKTKAGKTPLDLATN 151
>gi|328779905|ref|XP_003249717.1| PREDICTED: tankyrase-1 isoform 1 [Apis mellifera]
Length = 1193
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+LR NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 497 SKSGDLAAVERILRTNPLAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 552
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 553 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 608
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 609 LLLRHGADATKKNRDGATPLDLVRDG 634
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 652 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 705
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++ A
Sbjct: 706 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQLCA--- 761
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD +K+ EG+TPLD
Sbjct: 762 LLLAHGADPFSKNQEGQTPLD 782
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 31 KTGDLTRVKALV--TPKTVNARDTAGRKSTPLHFAAGYGRIDVVEFLLSA----GASIQA 84
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 85 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 140
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 141 LLQHGADANIRNTEGKTALE 160
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 211 TPLHLAAGYNRSRLVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 266
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL AD + + K+ +D +
Sbjct: 267 AVNASDLWAFTPLHEAASKS-RVE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 318
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELS 206
+L+E L + E + L+AC + A + +L+ LS
Sbjct: 319 ELQERLAY---EYKGHCLLDACRQ--ADLTKLKKYLS 350
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L +P ++N ++P TPLH V++ Y K
Sbjct: 321 QERLAYEYKGHCLLDACRQADLTKLKKYL--SPEVVNFKHPYTRDTPLHCAVASPYPKRK 378
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
++++SL+ L +N TPLH+A + +A +LL H A + A G T
Sbjct: 379 QVIESLIR----KNAALNEKNKDFLTPLHVATDHSHYDAMDVLLRHNAKVNALDGLGQTA 434
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH V R ++ + LL YN D S +G T
Sbjct: 435 LHRCV----REDNVQACRILLSYNVDPSIVSLQGYT 466
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 680 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 735
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 736 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 769
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 58 TPLHFAAGYGRIDVVEFLLSAGASIQARDDGGLHPLHNACSFGHSD----VVRLLLEAGA 113
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +DN TPL H + G + LL H + R
Sbjct: 114 NPNTRDNWNYTPL-HEAAIKGKIDVCIALLQHGADANIR 151
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 200 VNCHASDGRRSTPLHLAAGYNRSRLVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 255
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ LL++ A +A D TPL
Sbjct: 256 EVTEALLKHGAAVNASDLWAFTPL 279
>gi|328779903|ref|XP_396483.4| PREDICTED: tankyrase-1 isoform 2 [Apis mellifera]
Length = 1208
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+LR NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 497 SKSGDLAAVERILRTNPLAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 552
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 553 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 608
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 609 LLLRHGADATKKNRDGATPLDLVRDG 634
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 652 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 705
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++ A
Sbjct: 706 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQLCA--- 761
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD +K+ EG+TPLD
Sbjct: 762 LLLAHGADPFSKNQEGQTPLD 782
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 31 KTGDLTRVKALV--TPKTVNARDTAGRKSTPLHFAAGYGRIDVVEFLLSA----GASIQA 84
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 85 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 140
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 141 LLQHGADANIRNTEGKTALE 160
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 211 TPLHLAAGYNRSRLVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 266
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL AD + + K+ +D +
Sbjct: 267 AVNASDLWAFTPLHEAASKS-RVE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 318
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELS 206
+L+E L + E + L+AC + A + +L+ LS
Sbjct: 319 ELQERLAY---EYKGHCLLDACRQ--ADLTKLKKYLS 350
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L +P ++N ++P TPLH V++ Y K
Sbjct: 321 QERLAYEYKGHCLLDACRQADLTKLKKYL--SPEVVNFKHPYTRDTPLHCAVASPYPKRK 378
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
++++SL+ L +N TPLH+A + +A +LL H A + A G T
Sbjct: 379 QVIESLIR----KNAALNEKNKDFLTPLHVATDHSHYDAMDVLLRHNAKVNALDGLGQTA 434
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH V R ++ + LL YN D S +G T
Sbjct: 435 LHRCV----REDNVQACRILLSYNVDPSIVSLQGYT 466
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 680 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 735
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 736 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 769
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 58 TPLHFAAGYGRIDVVEFLLSAGASIQARDDGGLHPLHNACSFGHSD----VVRLLLEAGA 113
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +DN TPL H + G + LL H + R
Sbjct: 114 NPNTRDNWNYTPL-HEAAIKGKIDVCIALLQHGADANIR 151
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + +++V+ LLE N ++ + TPLH AA G + LL HGA
Sbjct: 92 PLHNACSFGHSDVVRLLLEAGANPNT----RDNWNYTPLHEAAIKGKIDVCIALLQHGAD 147
Query: 111 IEAKANNGMTPLHLS----------------VWYSIRSEDYATVKTLLE-YNADCSAKDN 153
+ G T L L+ + + RS + + LL N +C A D
Sbjct: 148 ANIRNTEGKTALELADPATKPVLTGEYKKDELLEAARSGNEERLLQLLNPLNVNCHASDG 207
Query: 154 EGKTPLDHLSNGPGSAKLRELLL 176
TPL HL+ G ++L ++LL
Sbjct: 208 RRSTPL-HLAAGYNRSRLVQILL 229
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 200 VNCHASDGRRSTPLHLAAGYNRSRLVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 255
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ LL++ A +A D TPL
Sbjct: 256 EVTEALLKHGAAVNASDLWAFTPL 279
>gi|27377698|ref|NP_769227.1| CbbX protein [Bradyrhizobium japonicum USDA 110]
gi|27350843|dbj|BAC47852.1| cbbX [Bradyrhizobium japonicum USDA 110]
Length = 312
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T + +LE EL VGL +K ++R+ A +L++ R+ GL A PP
Sbjct: 22 RKEAEAAGITDT-LQQLEQEL---VGLRPVKNRVRQIASLLLIERIRQRAGL---ASAPP 74
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 75 TLHMSFTGNPGTGKTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 131
>gi|24559828|gb|AAN61150.1| CbbX [Bradyrhizobium japonicum]
Length = 310
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T + +LE EL VGL +K ++R+ A +L++ R+ GL A PP
Sbjct: 20 RKEAEAAGITDT-LQQLEQEL---VGLRPVKNRVRQIASLLLIERIRQRAGL---ASAPP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 129
>gi|148239025|ref|YP_001224412.1| CbbX protein [Synechococcus sp. WH 7803]
gi|147847564|emb|CAK23115.1| CbbX protein homolog [Synechococcus sp. WH 7803]
Length = 307
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
L A E+ D L+ ++GL +K ++R+ A +L+D+ R+ L L V HM+
Sbjct: 7 LAASFESSGVADVLQGLDEELIGLRPVKTRIREIAALLLVDQARRQLDL-VSTAPSLHMS 65
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
F G PGTGKT VA + +L+ +G L V V R DLVG++VGHT PKT+ +
Sbjct: 66 FTGQPGTGKTTVALRMSLILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTKEMI 120
>gi|83589966|ref|YP_429975.1| AAA ATPase [Moorella thermoacetica ATCC 39073]
gi|83572880|gb|ABC19432.1| AAA ATPase [Moorella thermoacetica ATCC 39073]
Length = 331
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
EQ RR +EA EL +VGL +K +++ + + +RR+ GL +
Sbjct: 32 EQAGRRRVEAVMA----------ELDKMVGLEAVKNLIKELRAFVEIQQRRRGEGLAASS 81
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
HM F GNPGTGK+ VAR++GRL +G+L ++ EV+R DLVGE++GHT K R
Sbjct: 82 T-VMHMIFKGNPGTGKSTVARLMGRLFKELGVLTQGQLIEVERADLVGEYIGHTAHKARE 140
Query: 301 RVGHLLSEITCLTFI 315
L I + FI
Sbjct: 141 ---QLKKAIGGILFI 152
>gi|384220891|ref|YP_005612057.1| hypothetical protein BJ6T_72210 [Bradyrhizobium japonicum USDA 6]
gi|354959790|dbj|BAL12469.1| hypothetical protein BJ6T_72210 [Bradyrhizobium japonicum USDA 6]
Length = 311
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T + +LE EL +GL +K ++R+ A +L++ R+ GL A PP
Sbjct: 20 RKEAEAAGITDT-LQQLEREL---IGLRPVKNRVRQIASLLLIERIRQRAGL---ASSPP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 129
>gi|119384438|ref|YP_915494.1| ATPase central domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119374205|gb|ABL69798.1| AAA ATPase, central domain protein [Paracoccus denitrificans
PD1222]
Length = 308
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAF 248
S + +DEL+ EL +GL +K ++R+ A +L+D R+ LGL A P HM+F
Sbjct: 20 SSGVREILDELDREL---IGLAPVKERIRETAALLLVDRARRDLGL---AYETPTLHMSF 73
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 74 TGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 124
>gi|385810757|ref|YP_005847153.1| ATPase [Ignavibacterium album JCM 16511]
gi|383802805|gb|AFH49885.1| ATPase of the AAA+ class [Ignavibacterium album JCM 16511]
Length = 1281
Score = 80.5 bits (197), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 61/112 (54%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++ L NEL GL LK L + + RK G++ + H FLGNPGTGKT
Sbjct: 441 LENLLNELYEFTGLDNLKQSLVDFLTYLNFVNERKRKGIRTEEKLELHCLFLGNPGTGKT 500
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
VAR+ G++L +G+L V EV RT LVG+++G T KT + + L I
Sbjct: 501 SVARLFGKILKSMGLLENGHVIEVDRTGLVGQYIGETAIKTDKIISEALGGI 552
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E S + ++DEL+ + GL E+K + + + RK GL V R H F
Sbjct: 1011 EFNSSIRKQLDELDM----LAGLDEVKRTIYRIINSEKVAALRKERGLAVLPRNL-HGLF 1065
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQR 283
+G GTGK+ +ARI ++LY + ++ +D E++R
Sbjct: 1066 IGTGGTGKSTIARIYSKILYEMNLIKSDEPLELER 1100
>gi|296393163|ref|YP_003658047.1| ATPase AAA [Segniliparus rotundus DSM 44985]
gi|296180310|gb|ADG97216.1| AAA ATPase central domain protein [Segniliparus rotundus DSM 44985]
Length = 605
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A +E KA + D E EL +GL E+K Q+ + + + RR+ GL VG +R H+ F
Sbjct: 301 AAAERKAALLDIAEQELDQFIGLDEVKDQVARLKSSVAMALRRQERGLAVG-QRAHHLVF 359
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DLVG+ +G T KT + L
Sbjct: 360 AGPPGTGKTTIARVVAKMYCGLGLLKKETIREVHRPDLVGQHIGETEAKTNAVIDSALDG 419
Query: 309 ITCL 312
+ L
Sbjct: 420 VLFL 423
>gi|209521283|ref|ZP_03270002.1| CbbX protein [Burkholderia sp. H160]
gi|209498290|gb|EDZ98426.1| CbbX protein [Burkholderia sp. H160]
Length = 325
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R +LGL GA P HM F GNPGTGKT VA +
Sbjct: 39 DLVGLAPVKTRIREVAAHLLVERARASLGLAGGA--PTLHMCFSGNPGTGKTTVALRMAE 96
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + + V R DLVG+++GHT PKTR
Sbjct: 97 VLHRLGYIRRNHLVSVTRDDLVGQYIGHTAPKTR 130
>gi|386397316|ref|ZP_10082094.1| putative Rubsico expression protein CbbX [Bradyrhizobium sp.
WSM1253]
gi|385737942|gb|EIG58138.1| putative Rubsico expression protein CbbX [Bradyrhizobium sp.
WSM1253]
Length = 311
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 72/117 (61%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R+ EA T + +LE EL +GL +K ++R+ A +L++ R+ GL A PP
Sbjct: 20 RKEAEAAGIT-GTLQQLEQEL---IGLKPVKNRVRQIASLLLIERIRQRAGL---ASSPP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 129
>gi|392426152|ref|YP_006467146.1| AAA+ family ATPase [Desulfosporosinus acidiphilus SJ4]
gi|391356115|gb|AFM41814.1| AAA+ family ATPase [Desulfosporosinus acidiphilus SJ4]
Length = 321
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Query: 184 KRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP 243
++ +L + + K K+ E+ EL + +GL +K + + + +RR L V
Sbjct: 40 RKNSLSSVEKDKDKIAEILAELQSYIGLETVKRFILDLQAFVEIQKRRVQEKL-VSEPLV 98
Query: 244 PHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
HM F GNPGTGKT VAR++GRL +G+L V E +R DLVGE++GHT KTR ++
Sbjct: 99 LHMIFRGNPGTGKTTVARLIGRLYKEMGVLQKGHVIECERADLVGEYIGHTAQKTREQL 157
>gi|340725973|ref|XP_003401338.1| PREDICTED: tankyrase-1-like [Bombus terrestris]
Length = 1208
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+LR NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 497 SKSGDLAAVERILRTNPLAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 552
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 553 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 608
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 609 LLLRHGADATKKNRDGATPLDLVRDG 634
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN ++ + LLE ++
Sbjct: 652 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLDVAEFLLER----GADVN 705
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++
Sbjct: 706 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQ---LCA 761
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD +K+ EG+TPLD
Sbjct: 762 LLLAHGADPFSKNQEGQTPLD 782
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 31 KTGDLARVKALV--TPKTVNARDTAGRKSTPLHFAAGYGRIDVVEFLLSA----GASIQA 84
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 85 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 140
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 141 LLQHGADANIRNTEGKTALE 160
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 211 TPLHLAAGYNRSRLVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 266
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL AD + + K+ +D +
Sbjct: 267 AVNASDLWAFTPLHEAASKS-RVE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 318
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIV 209
+L+E L + E + L+AC + A + +L+ LS V
Sbjct: 319 ELQERLTY---EYKGHCLLDACRQ--ADLTKLKKYLSQEV 353
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L + ++N ++P TPLH V++ Y K
Sbjct: 321 QERLTYEYKGHCLLDACRQADLTKLKKYLSQ--EVINFKHPYTGDTPLHCAVASPYPKRK 378
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
++++SL+ L +N TPLH+A + +A +LL H A + A G T
Sbjct: 379 QVIESLIR----KNAALNEKNKDILTPLHVATDHSHYDAMDVLLRHNAKVNALDGLGQTA 434
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH V R ++ + LL YN D S G T
Sbjct: 435 LHRCV----REDNVQACRILLSYNVDPSIVSLPGYT 466
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA + A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 680 TPLHLAAGYNNLDVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 735
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH-----SEEQRKRRALE-ACSE 193
+A D G TPL H + G +L LLL H S+ Q + L+ AC++
Sbjct: 736 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGADPFSKNQEGQTPLDLACAD 787
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 58 TPLHFAAGYGRIDVVEFLLSAGASIQARDDGGLHPLHNACSFGHSD----VVRLLLEAGA 113
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +DN TPL H + G + LL H + R
Sbjct: 114 NPNTRDNWNYTPL-HEAAIKGKIDVCIALLQHGADANIR 151
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + +++V+ LLE N ++ + TPLH AA G + LL HGA
Sbjct: 92 PLHNACSFGHSDVVRLLLEAGANPNT----RDNWNYTPLHEAAIKGKIDVCIALLQHGAD 147
Query: 111 IEAKANNGMTPLHLS----------------VWYSIRSEDYATVKTLLE-YNADCSAKDN 153
+ G T L L+ + + RS + + LL N +C A D
Sbjct: 148 ANIRNTEGKTALELADPATKPVLTGEYKKDELLEAARSGNEERLLQLLNPLNVNCHASDG 207
Query: 154 EGKTPLDHLSNGPGSAKLRELLL 176
TPL HL+ G ++L ++LL
Sbjct: 208 RRSTPL-HLAAGYNRSRLVQILL 229
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 200 VNCHASDGRRSTPLHLAAGYNRSRLVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 255
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ LL++ A +A D TPL
Sbjct: 256 EVTEALLKHGAAVNASDLWAFTPL 279
>gi|268557970|ref|XP_002636975.1| Hypothetical protein CBG09456 [Caenorhabditis briggsae]
Length = 1812
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 78/130 (60%), Gaps = 11/130 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH+AA+ G E + LL+ +G+
Sbjct: 626 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLAAQEGHKEISGLLIENGS 681
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
+ AKANNG+TPLHL ED+ V + L++ ++ ++K N G TPL H++ G
Sbjct: 682 DVGAKANNGLTPLHLCA-----QEDHVPVAQILVDSGSEINSKTNAGYTPL-HVACHFGQ 735
Query: 169 AKLRELLLWH 178
+ L+ H
Sbjct: 736 LNMVRFLVEH 745
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+++ Y ++V+ LLE V++E +N TPLH+AA ++ A LLL +GA
Sbjct: 560 TPLHLASKYGNLQVVRLLLER--GTPVDIEGKNQV--TPLHVAAHYNNDKVAMLLLENGA 615
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+A A NG TPLH++ + TLL++ AD +AK G TPL HL+ G
Sbjct: 616 SAKASAKNGYTPLHIAA----KKNQMEIASTLLQFKADPNAKSRAGFTPL-HLAAQEGHK 670
Query: 170 KLRELLL 176
++ LL+
Sbjct: 671 EISGLLI 677
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 428 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 483
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 484 KVDAQARELQTPLHIAS----RLGNTDIVVLLLQAGANSNATTRDHYSPL-HIAAKEGQE 538
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 539 EVVGILLDHNADK 551
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 189 DAKGKVRLPA-LHIAAKKDDTKAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 241
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ LL+ N + Q + +PLH+A K G A +LLA GA I+++ + +TP
Sbjct: 242 NVGTLLLDKGAN----VNYQARHNISPLHVATKWGRINMANVLLARGAIIDSRTKDLLTP 297
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 298 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 349
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
Q R+ A+ A++GDL LLR + +N N LH+++ +E+V
Sbjct: 26 QPEGGRAEGSASFLRAARAGDLEKVLELLRAG-TDINTSN-ANGLNSLHLASKEGHSEVV 83
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ L++ + +++A G T LH+A+ G + +L+ +GA + ++ NG TPL++
Sbjct: 84 RELIKR----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYM 139
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ + ED V+ LL + A+ + +G TPL
Sbjct: 140 AAQEN--HED--VVRYLLNHGANQALSTEDGFTPL 170
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L ++ S +N + TPLHV+ + + +V+ L+E G D
Sbjct: 694 LHLCAQE-DHVPVAQILVDSGSEINSKTNA-GYTPLHVACHFGQLNMVRFLVEH-GADVG 750
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
E + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 751 E---KTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLAIA 796
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+ A + + + L++ E+ ++ G TPLH+A G + L+ HGA
Sbjct: 692 TPLHLCAQEDHVPVAQILVD----SGSEINSKTNAGYTPLHVACHFGQLNMVRFLVEHGA 747
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 748 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 793
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL V+ +V LLE KV L A LH+AAK +AA LLL +
Sbjct: 168 TPLAVALQQGHDRVVAVLLENDAKGKVRLPA--------LHIAAKKDDTKAATLLLQNEH 219
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ + +G TPLH++ Y E+ T+ LL+ A+ + + +PL H++ G
Sbjct: 220 NPDVTSKSGFTPLHIAAHYG--HENVGTL--LLDKGANVNYQARHNISPL-HVATKWGRI 274
Query: 170 KLRELLL 176
+ +LL
Sbjct: 275 NMANVLL 281
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ + + LL HGA
Sbjct: 102 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEDVVRYLLNHGA 157
Query: 110 FIEAKANNGMTPLHLSV 126
+G TPL +++
Sbjct: 158 NQALSTEDGFTPLAVAL 174
>gi|379056839|ref|ZP_09847365.1| ATPase [Serinicoccus profundi MCCC 1A05965]
Length = 554
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
++EL EL ++GL +K ++ + + +D RR+ GLKV A H+ F+GNPGTGK
Sbjct: 236 SVEELLAELDQLIGLERVKAEIHRQVAVLKMDARRQEAGLKV-ATLTRHLVFVGNPGTGK 294
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVG 303
T VAR++G + +G+L ++ EV R++LV ++G T KT VG
Sbjct: 295 TTVARLVGGIYRALGLLSKGQLVEVDRSELVAGYLGQTAAKTAEVVG 341
>gi|380024467|ref|XP_003696017.1| PREDICTED: LOW QUALITY PROTEIN: tankyrase-1-like [Apis florea]
Length = 1208
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+LR NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 497 SKSGDLAAVERILRTNPLAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 552
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 553 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 608
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 609 LLLRHGADATKKNRDGATPLDLVRDG 634
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN E+ + LLE ++ AQ+ G PLH A+ G + A LL+ +
Sbjct: 680 TPLHLAAGYNNLEVAEFLLER----GADVNAQDKGGLIPLHNASSYGHLDIAALLIKYNT 735
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+ A G TPLH + R++ A LL + AD +K+ EG+TPLD
Sbjct: 736 VVNATDKWGFTPLHEAAQKG-RTQLCA---LLLAHGADPFSKNQEGQTPLD 782
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 31 KTGDLARVKALV--TPKTVNARDTAGRKSTPLHFAAGYGRIDVVEFLLSA----GASIQA 84
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 85 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 140
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 141 LLQHGADANIRNTEGKTALE 160
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 211 TPLHLAAGYNRSRLVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 266
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL AD + + K+ +D +
Sbjct: 267 AVNASDLWAFTPLHEAASKS-RVE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 318
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELS 206
+L+E L + E + L+AC + A + +L+ LS
Sbjct: 319 ELQERLAY---EYKGHCLLDACRQ--ADLTKLKKYLS 350
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L +P ++N ++P TPLH V++ Y K
Sbjct: 321 QERLAYEYKGHCLLDACRQADLTKLKKYL--SPEVVNFKHPYTRDTPLHCAVASPYPKRK 378
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
++++SL+ L +N TPLH+A + +A +LL H A + A G T
Sbjct: 379 QVIESLIR----KNAALNEKNKDFLTPLHVATDHSHYDAMDVLLRHNAKVNALDGLGQTA 434
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH V R ++ + LL YN D S +G T
Sbjct: 435 LHRCV----REDNVQACRILLSYNVDPSIVSLQGYT 466
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 680 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 735
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 736 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 769
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 58 TPLHFAAGYGRIDVVEFLLSAGASIQARDDGGLHPLHNACSFGHSD----VVRLLLEAGA 113
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +DN TPL H + G + LL H + R
Sbjct: 114 NPNTRDNWNYTPL-HEAAIKGKIDVCIALLQHGADANIR 151
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + +++V+ LLE N ++ + TPLH AA G + LL HGA
Sbjct: 92 PLHNACSFGHSDVVRLLLEAGANPNT----RDNWNYTPLHEAAIKGKIDVCIALLQHGAD 147
Query: 111 IEAKANNGMTPLHLS----------------VWYSIRSEDYATVKTLLE-YNADCSAKDN 153
+ G T L L+ + + RS + + LL N +C A D
Sbjct: 148 ANIRNTEGKTALELADPATKPVLTGEYKKDELLEAARSGNEERLLQLLNPLNVNCHASDG 207
Query: 154 EGKTPLDHLSNGPGSAKLRELLL 176
TPL HL+ G ++L ++LL
Sbjct: 208 RRSTPL-HLAAGYNRSRLVQILL 229
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 200 VNCHASDGRRSTPLHLAAGYNRSRLVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 255
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ LL++ A +A D TPL
Sbjct: 256 EVTEALLKHGAAVNASDLWAFTPL 279
>gi|224536929|ref|ZP_03677468.1| hypothetical protein BACCELL_01805 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521456|gb|EEF90561.1| hypothetical protein BACCELL_01805 [Bacteroides cellulosilyticus
DSM 14838]
Length = 1113
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERR-KALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL+ ++GL +K ++++ A + ++ + +A+G K H F+GNPGTGKT VARI
Sbjct: 854 ELNQLIGLSSVKREVKEIADYIKVERAKAEAMGKKFQGV-VDHYLFVGNPGTGKTTVARI 912
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+G + Y +G+LP++R+ EV R DLV +VG T KT R V
Sbjct: 913 MGNIFYSLGVLPSNRLLEVTRKDLVEGYVGQTATKTARVV 952
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+E+ EL VG+ E+K ++K + + RK G K + H FLGNPGTGKT
Sbjct: 290 EEIMAELDEFVGIDEIKATVQKIINKIDFERERKGAGAKREVK--DHFLFLGNPGTGKTT 347
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ARI +L + +LP ++ EV R +LV +VG T + V
Sbjct: 348 IARIFADILNSLEVLPIGQLVEVSRKELVAGYVGQTALAVEKYV 391
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D + EL+ VG+ +K ++R A + +D+ +G+ P H+ GNPGTGKT
Sbjct: 565 LDVVLAELNEFVGMDSVKAEIRALANKIAMDKEMMEMGIADAEVTPVHIVLTGNPGTGKT 624
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
+A LG + +G+LPTD+V E +R L+ + T
Sbjct: 625 TIACKLGEVFKAIGLLPTDKVVEKERKHLISTYQNETA 662
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 205 LSNIVGLHELKIQLRKWA---KGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
L +VG+ +K QL+ + + L +R + +++G M GN GTGKT +A
Sbjct: 36 LRELVGMETVKNQLQDLVNTCESLALRAQRSGISIRLGM----DMIITGNTGTGKTKLAG 91
Query: 262 ILGRLLYMVGILPTDRVTEVQRTD 285
+L +LLY GI+ + V D
Sbjct: 92 VLQKLLYSSGIIKKPAMKVVDAVD 115
>gi|124267969|ref|YP_001021973.1| AAA type ATPase [Methylibium petroleiphilum PM1]
gi|124260744|gb|ABM95738.1| AAA type ATPase [Methylibium petroleiphilum PM1]
Length = 298
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RAL S + +++L+ EL VGL +K ++R A +++D+ R+ GL+ +PP
Sbjct: 12 RALFEASGVRTLLEQLDAEL---VGLAPVKGRIRDIAALLVIDKLRQQQGLQ---SQPPS 65
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F GNPGTGKT VA + +L +G + + V R DLVG+F+GHT PKT+
Sbjct: 66 LHMCFTGNPGTGKTTVAMRMAAVLKQLGYVRKGHLVAVTRDDLVGQFIGHTAPKTK 121
>gi|423223221|ref|ZP_17209690.1| hypothetical protein HMPREF1062_01876 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392639322|gb|EIY33147.1| hypothetical protein HMPREF1062_01876 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 1109
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERR-KALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL+ ++GL +K ++++ A + ++ + +A+G K H F+GNPGTGKT VARI
Sbjct: 850 ELNQLIGLSSVKREVKEIADYIKVERAKAEAMGKKFQGV-VDHYLFVGNPGTGKTTVARI 908
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+G + Y +G+LP++R+ EV R DLV +VG T KT R V
Sbjct: 909 MGNIFYSLGVLPSNRLLEVTRKDLVEGYVGQTATKTARVV 948
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+E+ EL VG+ E+K ++K + + RK G K + H FLGNPGTGKT
Sbjct: 286 EEIMAELDEFVGIDEIKATVQKIINKIDFERERKGAGAKREVK--DHFLFLGNPGTGKTT 343
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ARI +L + +LP ++ EV R +LV +VG T + V
Sbjct: 344 IARIFADILNSLEVLPIGQLVEVSRKELVAGYVGQTALAVEKYV 387
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D + EL+ VG+ +K ++R A + +D+ +G+ P H+ GNPGTGKT
Sbjct: 561 LDVVLAELNEFVGMDSVKAEIRALANKIAMDKEMMEMGIADAEVTPVHIVLTGNPGTGKT 620
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
+A LG + +G+LPTD+V E +R L+ + T
Sbjct: 621 TIACKLGEVFKAIGLLPTDKVVEKERKHLISTYQNETA 658
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 205 LSNIVGLHELKIQLRKWA---KGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
L +VG+ +K QL+ + + L +R + +++G M GN GTGKT +A
Sbjct: 32 LRELVGMETVKNQLQDLVNTCESLALRAQRSGISIRLGM----DMIITGNTGTGKTKLAG 87
Query: 262 ILGRLLYMVGILPTDRVTEVQRTD 285
+L +LLY GI+ + V D
Sbjct: 88 VLQKLLYSSGIIKKPAMKVVDAVD 111
>gi|333988930|ref|YP_004521544.1| hypothetical protein JDM601_0290 [Mycobacterium sp. JDM601]
gi|333484898|gb|AEF34290.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length = 610
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA++ E E EL +GL E+K Q+++ + ++ RK GL VG +R H+ F
Sbjct: 304 AAHERKAELLAEAERELGEFIGLSEVKNQVQRLKSSVAMEVVRKQHGLAVG-QRTHHLVF 362
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 363 AGPPGTGKTTIARVVAKIYCGLGLLKKENIKEVHRADLIGQHIGETEAKTNAIIDSALDG 422
Query: 309 ITCL 312
+ L
Sbjct: 423 VLFL 426
>gi|374995721|ref|YP_004971220.1| stage V sporulation protein K [Desulfosporosinus orientis DSM 765]
gi|357214087|gb|AET68705.1| stage V sporulation protein K [Desulfosporosinus orientis DSM 765]
Length = 331
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ +EL + +GL +K +R + + +RR L V HM F GNPGTGKT V
Sbjct: 66 EILDELDSYIGLELVKRLIRDLQAFVEIQKRRTQEKL-VAEPLVLHMIFKGNPGTGKTTV 124
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR++GRL +G+L + E +R DLVGE++GHT KTR +V
Sbjct: 125 ARLVGRLFKEMGVLQKGHIIECERADLVGEYIGHTAQKTREQV 167
>gi|320547605|ref|ZP_08041890.1| stage V sporulation protein K [Streptococcus equinus ATCC 9812]
gi|320447680|gb|EFW88438.1| stage V sporulation protein K [Streptococcus equinus ATCC 9812]
Length = 372
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D+L+ +L+ +VGL +K Q+ + + R GLK + + HMAFLGNPGT KT
Sbjct: 95 LDDLQEDLNKLVGLTAVKEQVNDLITFNKIQQARVKAGLK-KSNKTLHMAFLGNPGTAKT 153
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVG 303
VARI+G++ +G+L E RTDL+ E+ G T K ++ V
Sbjct: 154 TVARIVGKMYKSLGLLSKGHFIEASRTDLIAEYQGQTAIKVKKLVN 199
>gi|254392889|ref|ZP_05008057.1| CbxX/CfqX family protein [Streptomyces clavuligerus ATCC 27064]
gi|197706544|gb|EDY52356.1| CbxX/CfqX family protein [Streptomyces clavuligerus ATCC 27064]
Length = 645
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPG 253
A + E +EL +VGL +K Q++ + + + R GL V +PP H F G PG
Sbjct: 346 ALLAEALSELERMVGLEPVKRQVKALSAQLEMARLRAGQGLPV---QPPKRHFVFSGPPG 402
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
TGKT VARILGR+ Y +G+L D + E QR+D+VGE++G T K + L +
Sbjct: 403 TGKTTVARILGRVFYALGLLGGDHLVEAQRSDMVGEYLGQTAVKANELIDSALGGV 458
>gi|404423947|ref|ZP_11005564.1| ATPase AAA [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
gi|403652644|gb|EJZ07673.1| ATPase AAA [Mycobacterium fortuitum subsp. fortuitum DSM 46621]
Length = 574
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A+R H+ F G PGTGKT +
Sbjct: 282 EAEAELAEFIGLEEVKFQVARLKSSVAMSIRRQERGLAV-AQRTNHLVFAGPPGTGKTTI 340
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 341 ARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 393
>gi|441520771|ref|ZP_21002436.1| hypothetical protein GSI01S_09_00590 [Gordonia sihwensis NBRC
108236]
gi|441459666|dbj|GAC60397.1| hypothetical protein GSI01S_09_00590 [Gordonia sihwensis NBRC
108236]
Length = 597
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ EL+ +GL +K Q+ + + L + R GL+ +R H+AF G PGTGKT +
Sbjct: 300 EVSEELAAQIGLAPVKEQVERLRAAVTLAQLRSEKGLRTQSR-SLHLAFTGPPGTGKTTI 358
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
AR++ RL +G+L TD V EV R DLVG+ +G T PKT V L +
Sbjct: 359 ARLVARLYRALGLLSTDTVVEVSRKDLVGQHLGATAPKTSAVVDSALDGV 408
>gi|108797350|ref|YP_637547.1| ATPase AAA [Mycobacterium sp. MCS]
gi|119866435|ref|YP_936387.1| ATPase central domain-containing protein [Mycobacterium sp. KMS]
gi|108767769|gb|ABG06491.1| AAA ATPase, central region [Mycobacterium sp. MCS]
gi|119692524|gb|ABL89597.1| AAA ATPase, central domain protein [Mycobacterium sp. KMS]
Length = 594
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL++ +GL E+K Q+ + + + RR+ GL V A+R H+ F G PGTGKT +
Sbjct: 297 EAEAELADFIGLEEVKYQVARLKSSVAMSIRRQERGLAV-AQRTNHLVFAGPPGTGKTTI 355
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 356 ARVVAKIYCGLGLLRKETVREVHRADLIGQHIGETEAKTNAIIDAALDGVLFL 408
>gi|374323839|ref|YP_005076968.1| stage V sporulation protein K [Paenibacillus terrae HPL-003]
gi|357202848|gb|AET60745.1| stage V sporulation protein K [Paenibacillus terrae HPL-003]
Length = 327
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E++ EL ++VGL +K + + + + R GL A HM F GNPGTGKT V
Sbjct: 58 EIQKELDHLVGLDNIKDLVFEVYAFLQIAHMRTDAGLLSNAH-VYHMIFKGNPGTGKTTV 116
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
ARI+ ++L +G+L + EV+R DLVGE++GHT KTR V
Sbjct: 117 ARIIAKMLQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRDLV 159
>gi|187933391|ref|YP_001886877.1| stage V sporulation protein K [Clostridium botulinum B str. Eklund
17B]
gi|187721544|gb|ACD22765.1| stage V sporulation protein K [Clostridium botulinum B str. Eklund
17B]
Length = 1128
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/102 (37%), Positives = 65/102 (63%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE++L +I+GL+E+K LR K +L E+RK++G+ + +M F+GNPGTGKT +
Sbjct: 585 DLEDKLKSIIGLNEVKDFLRNQYKLILAQEKRKSVGVTTKIEQNLNMVFIGNPGTGKTSI 644
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
AR++ +L +G+L ++ E R+ V + G T KT ++
Sbjct: 645 ARLVADMLNSIGVLKVGQLIETDRSSFVSKIPGETPNKTEKK 686
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+DE++ + +I+G++ELK L + + R LGLK +M F GN GTGKT
Sbjct: 316 LDEIKYKFQSIIGMNELKEFLNTIENNYKVQKIRNVLGLK-SPGISLNMIFAGNAGTGKT 374
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVG----EFVGHTGPKTRRRVGHLL 306
AR+ + L + IL EV + D +G E + T +G LL
Sbjct: 375 NAARLTYQYLNALDILKKPIFLEVSKVDFIGADRLETIQKTNTIIESAIGGLL 427
Score = 45.8 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE++L ++V +K LR K + + E+RK +G + + +M G GTGK +
Sbjct: 856 DLEHKLESLVENDYIKEFLRNQYKVLKIQEKRKRMGFQSDINKYTNMIITGECGTGKKTL 915
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEF 290
IL + Y++GI + E+ +L+ F
Sbjct: 916 LTILSEMYYVMGITKSKNFIEINSYELIEMF 946
>gi|294811505|ref|ZP_06770148.1| ATPase [Streptomyces clavuligerus ATCC 27064]
gi|294324104|gb|EFG05747.1| ATPase, partial [Streptomyces clavuligerus ATCC 27064]
Length = 723
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPG 253
A + E +EL +VGL +K Q++ + + + R GL V +PP H F G PG
Sbjct: 443 ALLAEALSELERMVGLEPVKRQVKALSAQLEMARLRAGQGLPV---QPPKRHFVFSGPPG 499
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
TGKT VARILGR+ Y +G+L D + E QR+D+VGE++G T K + L +
Sbjct: 500 TGKTTVARILGRVFYALGLLGGDHLVEAQRSDMVGEYLGQTAVKANELIDSALGGV 555
>gi|46309266|dbj|BAD15120.1| cfxQ [Heterosigma akashiwo]
Length = 298
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S+ + +D LE+EL +GL +K ++R+ A +L+D+ RK LGL V + HM F G+
Sbjct: 23 SQIQRVIDILESEL---IGLKPVKSRIREIAALLLVDKLRKNLGL-VSSSPGLHMPFTGS 78
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + +LY +G + V R DLVG+++GHT PKT+
Sbjct: 79 PGTGKTTVALRMADILYKLGYSRKGHLITVTRDDLVGQYIGHTAPKTK 126
>gi|326440107|ref|ZP_08214841.1| ATPase [Streptomyces clavuligerus ATCC 27064]
Length = 643
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPG 253
A + E +EL +VGL +K Q++ + + + R GL V +PP H F G PG
Sbjct: 350 ALLAEALSELERMVGLEPVKRQVKALSAQLEMARLRAGQGLPV---QPPKRHFVFSGPPG 406
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
TGKT VARILGR+ Y +G+L D + E QR+D+VGE++G T K + L +
Sbjct: 407 TGKTTVARILGRVFYALGLLGGDHLVEAQRSDMVGEYLGQTAVKANELIDSALGGV 462
>gi|297567606|ref|YP_003686577.1| phosphoribulokinase/uridine kinase [Meiothermus silvanus DSM 9946]
gi|296852055|gb|ADH65069.1| phosphoribulokinase/uridine kinase [Meiothermus silvanus DSM 9946]
Length = 312
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++ L+ EL +GL +K ++R+ A +++D R+ LGL V +R HMAF GNPGTGKT
Sbjct: 23 LERLDQEL---IGLAPVKGRIREIAAYLVVDRLRRDLGL-VASRPVLHMAFTGNPGTGKT 78
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + +L+ +G + D + R DLVG+++GHT PKT+
Sbjct: 79 TVALRMATILHRLGYIRRDHLVVATRDDLVGQYIGHTAPKTK 120
>gi|126432972|ref|YP_001068663.1| ATPase central domain-containing protein [Mycobacterium sp. JLS]
gi|126232772|gb|ABN96172.1| AAA ATPase, central domain protein [Mycobacterium sp. JLS]
Length = 594
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL++ +GL E+K Q+ + + + RR+ GL V A+R H+ F G PGTGKT +
Sbjct: 297 EAEAELADFIGLEEVKYQVARLKSSVAMSIRRQERGLAV-AQRTNHLVFAGPPGTGKTTI 355
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 356 ARVVAKIYCGLGLLRKETVREVHRADLIGQHIGETEAKTNAIIDAALDGVLFL 408
>gi|189459996|ref|ZP_03008781.1| hypothetical protein BACCOP_00630 [Bacteroides coprocola DSM 17136]
gi|189433299|gb|EDV02284.1| ATPase, AAA family [Bacteroides coprocola DSM 17136]
Length = 614
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 63/113 (55%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A ET E EL +VGL +LK +++ L + R+ L + HM FL
Sbjct: 311 ALRETPFAEFSAEEELQQMVGLKQLKEDIQEARMMSLFLKERREFNLDLCGDSRYHMLFL 370
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GNPGTGKT VAR++G++ + +G+L E RT+LVGE++GHT T+ +
Sbjct: 371 GNPGTGKTTVARLVGKMYHQMGLLSKGHTVETCRTNLVGEYLGHTEKNTKEAI 423
>gi|87123955|ref|ZP_01079805.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. RS9917]
gi|86168524|gb|EAQ69781.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. RS9917]
Length = 302
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+++L+ EL +GL +K ++R+ A +L+D R++L L A P HM+F G+PGTGK
Sbjct: 20 LEQLDREL---IGLQPVKTRIREIAALLLVDRARRSLDLPSSA--PSLHMSFTGHPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L +G L V V R DLVG++VGHT PKTR
Sbjct: 75 TTVANRISEILNRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTR 117
>gi|297617264|ref|YP_003702423.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297145101|gb|ADI01858.1| AAA ATPase central domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 299
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++VGL E+K +R+ ++ ++R LK HM GNPGTGKT VARIL
Sbjct: 38 ELDSMVGLEEVKKLVRELIVFTVIQKKRLEQNLKAQPM-AMHMVMKGNPGTGKTTVARIL 96
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
G++ +G L + EV+R DLVGE++GHT KTR ++
Sbjct: 97 GKIYRELGTLAKGHLVEVERADLVGEYIGHTAQKTREQI 135
>gi|453364390|dbj|GAC79963.1| hypothetical protein GM1_013_01000 [Gordonia malaquae NBRC 108250]
Length = 559
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
A +DEL+ + +GL +K Q+ + L + R GL+ +R H+AF G PGTG
Sbjct: 276 AVIDELDAQ----IGLAAVKDQVDRLRSAARLAQVRSEKGLRTQSR-SLHLAFTGPPGTG 330
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
KT VAR++GRL +G+L +D V EV R DLVG +G T PKT
Sbjct: 331 KTTVARLVGRLFRALGVLDSDAVVEVSRKDLVGTHLGSTAPKT 373
>gi|444305650|ref|ZP_21141429.1| ATPase AAA [Arthrobacter sp. SJCon]
gi|443481980|gb|ELT44896.1| ATPase AAA [Arthrobacter sp. SJCon]
Length = 346
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E++ EL +VGL +K Q+R + + RRKA GL A H+ FLGNPGTGKT
Sbjct: 48 LSEVQAELDALVGLETVKEQVRALVALLQVQARRKAHGLPEVAT-SQHLVFLGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR+L + VG+L + EV R+ LVG++VG T KT R + L + +
Sbjct: 107 TVARLLAEMYRAVGLLQKGHLVEVDRSGLVGQYVGATAIKTDRVIRRALDGVLFI 161
>gi|118591567|ref|ZP_01548964.1| CbbX protein [Stappia aggregata IAM 12614]
gi|118435895|gb|EAV42539.1| CbbX protein [Stappia aggregata IAM 12614]
Length = 315
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--H 245
L A ET D L +++GL +K ++R+ A +L+D R+ +GL + P H
Sbjct: 19 LAAEYETSGVADVLRELDEHLIGLAPVKQRIRETAALLLVDRARREMGL---TQETPTLH 75
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M+F GNPGTGKT VA ++ LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 76 MSFTGNPGTGKTTVALMMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 129
>gi|332029075|gb|EGI69089.1| Tankyrase-1 [Acromyrmex echinatior]
Length = 1234
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+L+ NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 480 SKSGDLAAVERILQANPHTVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 535
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 536 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 591
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 592 LLLRHGADATKKNRDGATPLDLVRDG 617
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 635 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 688
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++ A
Sbjct: 689 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQLCA--- 744
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD K+ EG+TP+D
Sbjct: 745 LLLAHGADPFLKNQEGQTPVD 765
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ NP +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 14 KTGDLAKVKALV--NPKTVNARDTAGRKSTPLHFAAGYGRKDVVEFLLSA----GASIQA 67
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G + +LLL GA + N TPLH + +I+ + + T
Sbjct: 68 RDDGGLHPLHNACSFGHCDVVRLLLEAGASPNTRDNWNFTPLHEA---AIKGKIDVCI-T 123
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 124 LLQHGADVNIRNTEGKTALE 143
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 194 TPLHLAAGYNRSRVVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 249
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R+E LL AD + + K+ +D +
Sbjct: 250 AVNASDLWTFTPLHEAASKS-RAE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 301
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELS 206
+L+E L + E + L+AC + A + +L+ LS
Sbjct: 302 ELQERLAY---EYKGHCLLDACRQ--ADLTKLKKYLS 333
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 663 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 718
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 719 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 752
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L + ++N ++P TP+H V++ Y K
Sbjct: 304 QERLAYEYKGHCLLDACRQADLTKLKKYLSQ--EIVNFKHPYTGDTPMHCAVASPYPKRK 361
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+++++L+ + +N TPLH+A + +A +LL H A + A G T
Sbjct: 362 QVIEALIR----KNAAMNEKNKDFLTPLHVATDHSHYDAMDILLRHNAKVNALDGLGQTA 417
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH R ++ + LL YN D S +G T
Sbjct: 418 LHRCA----REDNVQACRILLSYNIDPSIISLQGYT 449
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 183 VNCHASDGRRSTPLHLAAGYNRSRVVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 238
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ LL++ A +A D TPL H + A++ LLL
Sbjct: 239 EVTEALLKHGAAVNASDLWTFTPL-HEAASKSRAEVCSLLL 278
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 29 FQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETP 88
+ L+R+N ++ NE+N TPLHV+ ++ + + LL N KV A + G+T
Sbjct: 364 IEALIRKNAAM-NEKNKDFL-TPLHVATDHSHYDAMDILLRH--NAKVN--ALDGLGQTA 417
Query: 89 LHMAAKNGCNEAAKLLLAH-------------GAFIEAK--------ANNGMTPLHLSVW 127
LH A+ +A ++LL++ A I A+ NG + +
Sbjct: 418 LHRCAREDNVQACRILLSYNIDPSIISLQGYTAAQISAENVLKILQDPPNGTDDVEAQLL 477
Query: 128 YSIRSEDYATVKTLLEYN---ADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ +S D A V+ +L+ N +C D TPL H + G + E LL H +
Sbjct: 478 EASKSGDLAAVERILQANPHTVNCRDLDGRHSTPL-HFAAGFNRVPVVEYLLAHGAD 533
>gi|154417631|ref|XP_001581835.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121916066|gb|EAY20849.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 707
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 96/176 (54%), Gaps = 16/176 (9%)
Query: 11 SAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEW 70
S A H C ++ + L + + +NE++ +T LH++A N EI + L+
Sbjct: 513 SLHIAAEHNCKETIEFLI------SHGANINEKDN-YGETALHLAARNNNKEIAELLISS 565
Query: 71 PGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSI 130
N + ++ YG+T LH+AA++ C E +LL+++G I K N+G T LH++ +Y+
Sbjct: 566 GAN----IYEKDEYGQTSLHIAAEHNCKETIELLVSYGININVKDNDGKTALHIAAFYNN 621
Query: 131 RSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRR 186
+ TV+ L+ + A+ + KDN+G+T L H + S + ELL+ H + K++
Sbjct: 622 KE----TVELLISHGANINEKDNDGETAL-HFAVAHNSKETAELLISHGIDINKKK 672
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N E + L+ N + ++ YG+T LH+AA N A+LL++HGA
Sbjct: 314 TALHITASQNNKETAEFLISHGAN----INEKDNYGQTSLHLAALNNSKGTAELLISHGA 369
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I K N+G T LH + Y+ + T++ L+ + A+ + K+ GKT L H +
Sbjct: 370 NINEKDNDGETALHKATNYNNKE----TIELLISHGANINEKNKFGKTAL-HFAAENNCK 424
Query: 170 KLRELLLWH 178
K ELL+ H
Sbjct: 425 KTAELLISH 433
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +T LH + YN E ++ L+ N + +N +G+T LH
Sbjct: 362 ELLISHGANINEKDN-DGETALHKATNYNNKETIELLISHGAN----INEKNKFGKTALH 416
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+N C + A+LL++HG I K N+G T LH + R T + L+ Y A+
Sbjct: 417 FAAENNCKKTAELLISHGINIYEKDNDGETALHKAA----RRNSKETAELLILYGANIYE 472
Query: 151 KDNEGKTPL 159
KDN G+ L
Sbjct: 473 KDNYGRAAL 481
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ SLLE+ + + ++ G T LH+ A E A+ L++HGA I K N G T LH
Sbjct: 291 IPSLLEYFLSHGANINKKDNDGVTALHITASQNNKETAEFLISHGANINEKDNYGQTSLH 350
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
L+ + + T + L+ + A+ + KDN+G+T L H + + + ELL+ H
Sbjct: 351 LAALNNSK----GTAELLISHGANINEKDNDGETAL-HKATNYNNKETIELLISH 400
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 34/157 (21%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
L ++ YN E ++ L+ + ++ YG+T LH+AA++ C E + L++HGA
Sbjct: 480 ALCIAKEYNCKETIELLISHDA----YIYEKDEYGQTSLHIAAEHNCKETIEFLISHGAN 535
Query: 111 IEAKANNGMTPLHL--------------SVWYSIRSED-YA--------------TVKTL 141
I K N G T LHL S +I +D Y T++ L
Sbjct: 536 INEKDNYGETALHLAARNNNKEIAELLISSGANIYEKDEYGQTSLHIAAEHNCKETIELL 595
Query: 142 LEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ Y + + KDN+GKT L H++ + + ELL+ H
Sbjct: 596 VSYGININVKDNDGKTAL-HIAAFYNNKETVELLISH 631
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T LH +A N + LL G + + ++ GET LH
Sbjct: 395 ELLISHGANINEKNK-FGKTALHFAAE-NNCKKTAELLISHG---INIYEKDNDGETALH 449
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E A+LL+ +GA I K N G L ++ Y+ + T++ L+ ++A
Sbjct: 450 KAARRNSKETAELLILYGANIYEKDNYGRAALCIAKEYNCKE----TIELLISHDAYIYE 505
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KD G+T L H++ + E L+ H
Sbjct: 506 KDEYGQTSL-HIAAEHNCKETIEFLISH 532
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A YN E V+ L+ N + ++ GET LH A + E A+LL++HG
Sbjct: 610 KTALHIAAFYNNKETVELLISHGAN----INEKDNDGETALHFAVAHNSKETAELLISHG 665
Query: 109 AFIEAKANNGMTPL 122
I K + T L
Sbjct: 666 IDINKKKKHVKTAL 679
>gi|403509673|ref|YP_006641311.1| stage V sporulation protein K [Nocardiopsis alba ATCC BAA-2165]
gi|402800479|gb|AFR07889.1| stage V sporulation protein K [Nocardiopsis alba ATCC BAA-2165]
Length = 1094
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
L EL + GL ++K + ++ ERR+A+G+ H+ F G PGTGKT VA
Sbjct: 834 LRAELDALTGLSDVKSTVNDLVNVLVAAERRRAIGMP-APTLSHHLVFAGPPGTGKTTVA 892
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
R+ GRLL+ +G+LP V E R DLVG ++GHT T
Sbjct: 893 RLYGRLLHALGVLPQGHVVEAARADLVGRYIGHTAQLT 930
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTMVA 260
EL ++GL +K ++ + R +GL PP H+ F G PGTGKT VA
Sbjct: 561 ELQALIGLDSVKDEVTTLINRNKMARHRAEMGLP----SPPVARHLVFAGPPGTGKTTVA 616
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
R+ GR+L + +L V E R DLVG++VG T KT
Sbjct: 617 RLYGRVLADLDVLRYGHVVEAARADLVGQYVGATAIKT 654
>gi|86751070|ref|YP_487566.1| ATPase AAA [Rhodopseudomonas palustris HaA2]
gi|86574098|gb|ABD08655.1| AAA ATPase-like [Rhodopseudomonas palustris HaA2]
Length = 306
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L++ RK +GL G P HM+F GNPGTGK
Sbjct: 31 LDQLDREL---IGLRPVKTRIREIAALLLVERLRKRMGLATG--NPTLHMSFTGNPGTGK 85
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 86 TTVALRIASILHRLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 128
>gi|28274852|gb|AAO25691.1| ankyrin repeat protein E4_2, partial [synthetic construct]
Length = 199
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 83/159 (52%), Gaps = 11/159 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G L + LL+ + N TPLH++A EIV+ LL+
Sbjct: 51 LHLAASKGHLEIVEVLLKHGADV--NANDTNGTTPLHLAAQAGHLEIVEVLLKH----GA 104
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + G TPLH+AA +G E ++LL +GA + A G+TPLHL+ ++
Sbjct: 105 DVNASDELGSTPLHLAATHGHLEIVEVLLKYGADVNADDTVGITPLHLAAFFG----HLE 160
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
V+ LL+Y AD +A+D GKT D +S G+ L E+L
Sbjct: 161 IVEVLLKYGADVNAQDKFGKTAFD-ISIDNGNEDLAEIL 198
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A EIV+ LL+ ++ A + G TPLH
Sbjct: 31 RILMANGADVNADDQ-HGNTPLHLAASKGHLEIVEVLLKH----GADVNANDTNGTTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+ G E ++LL HGA + A G TPLHL+ + V+ LL+Y AD +A
Sbjct: 86 LAAQAGHLEIVEVLLKHGADVNASDELGSTPLHLAATHG----HLEIVEVLLKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL + +
Sbjct: 142 DDTVGITPL-HLAAFFGHLEIVEVLLKYGAD 171
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A +G TPLHL+ V+ LL++ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNADDQHGNTPLHLAASKG----HLEIVEVLLKHGADVNAN 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL H +
Sbjct: 77 DTNGTTPL-HLAAQAGHLEIVEVLLKHGAD 105
>gi|333897084|ref|YP_004470958.1| stage V sporulation protein K [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112349|gb|AEF17286.1| stage V sporulation protein K [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 296
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL++++GL+++K + + + +RK GL V HM F GNPGTGKT VARIL
Sbjct: 38 ELNSLIGLNKVKQIINELYALEQVQIKRKNAGL-VTDPIVLHMVFKGNPGTGKTTVARIL 96
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
G+LL +G+L V EV+R DLVGE++GHT + + V L I
Sbjct: 97 GKLLKGIGVLNKGHVVEVERADLVGEYIGHTAHRVQENVKKALGGI 142
>gi|390934958|ref|YP_006392463.1| stage V sporulation protein K [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570459|gb|AFK86864.1| stage V sporulation protein K [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 296
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL++++GL+++K + + + +RK GL V HM F GNPGTGKT VARIL
Sbjct: 38 ELNSLIGLNKVKQIINELYALEQVQIKRKNAGL-VTDPIVLHMVFKGNPGTGKTTVARIL 96
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
G+LL +G+L V EV+R DLVGE++GHT + + V L I
Sbjct: 97 GKLLKGIGVLNKGHVVEVERADLVGEYIGHTAHRVQENVKKALGGI 142
>gi|379007553|ref|YP_005257004.1| AAA ATPase [Sulfobacillus acidophilus DSM 10332]
gi|361053815|gb|AEW05332.1| AAA ATPase central domain protein [Sulfobacillus acidophilus DSM
10332]
Length = 332
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+++ +L ++GL ++K +R+ + + R+ GL HM F G PGTGKT
Sbjct: 65 EDVLRDLDQLIGLTDIKRMVREIRAWVEIQALRENAGLATDPHML-HMVFSGAPGTGKTT 123
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VARILGRL + +G+L + EV+R DLVGE++GHT KTR + L + L
Sbjct: 124 VARILGRLFHALGVLAKGHLVEVERADLVGEYIGHTAQKTRDVIKRALGGVMFL 177
>gi|359775942|ref|ZP_09279261.1| hypothetical protein ARGLB_035_00550 [Arthrobacter globiformis NBRC
12137]
gi|359306791|dbj|GAB13090.1| hypothetical protein ARGLB_035_00550 [Arthrobacter globiformis NBRC
12137]
Length = 397
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E++ EL +VGL +K Q+R + + RRKA GL A H+ FLGNPGTGKT
Sbjct: 97 LSEVQAELDALVGLETVKEQVRALVALLQVQARRKAHGLPEVATSQ-HLVFLGNPGTGKT 155
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VAR+L + VG+L + EV R+ LVG++VG T KT R +
Sbjct: 156 TVARLLAEMYRAVGLLQKGHLVEVDRSGLVGQYVGATAIKTDRVI 200
>gi|325299923|ref|YP_004259840.1| AAA ATPase [Bacteroides salanitronis DSM 18170]
gi|324319476|gb|ADY37367.1| AAA ATPase central domain protein [Bacteroides salanitronis DSM
18170]
Length = 597
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 55/94 (58%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +VGL +K +L + L RRK LGL+V A H FLG+PGTGKT VAR++G
Sbjct: 311 LEEMVGLSRVKDELCEACAMALFTRRRKELGLEVSAENRNHFLFLGSPGTGKTTVARLIG 370
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+ + +G+L E R L+GEF+G T KT
Sbjct: 371 EIYHEMGLLSRGHTVETNRAKLIGEFIGQTEQKT 404
>gi|89894329|ref|YP_517816.1| hypothetical protein DSY1583 [Desulfitobacterium hafniense Y51]
gi|89333777|dbj|BAE83372.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 325
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
SE R R+A SE M E+ EL+ +VGL +K + + + + +RR L V
Sbjct: 37 SELSRGRKAAHHSSEN-GTMAEIIAELNALVGLSTVKRLIHEIQAYIEIQKRRTREKL-V 94
Query: 239 GARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
HM F GNPGTGKT VAR++GRL + +L + E +R DLVGE++GHT KT
Sbjct: 95 AEPLVLHMIFRGNPGTGKTTVARLIGRLFKEMEVLQKGHIIECERADLVGEYIGHTAQKT 154
Query: 299 RRRVGHLLSEITCL 312
R V L I +
Sbjct: 155 RDMVKKALGGILFI 168
>gi|78212308|ref|YP_381087.1| ATPase [Synechococcus sp. CC9605]
gi|78196767|gb|ABB34532.1| ATPase [Synechococcus sp. CC9605]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D+ R+ L L A P HM+F G+PGTGK
Sbjct: 20 LDQLDREL---IGLAPVKTRIREIAALLLVDQARQQLELPSTA--PSLHMSFTGHPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|38638086|ref|NP_943060.1| CbbX [Ralstonia eutropha H16]
gi|729238|sp|Q04540.1|CBXXP_RALEH RecName: Full=Protein CbxX, plasmid
gi|150676|gb|AAA98229.1| cfxXp [Plasmid pHG1]
gi|32527424|gb|AAP86174.1| CbbX [Ralstonia eutropha H16]
Length = 317
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTM 258
+L+ EL +GL +K ++R A +L+D+ R A G GA P HM F GNPGTGKT
Sbjct: 39 QLDREL---IGLKPVKARIRDIAALLLVDKLRAARGFSAGA--PSLHMCFTGNPGTGKTT 93
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + ++L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 94 VAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYIGHTAPKTK 134
>gi|219668752|ref|YP_002459187.1| ATPase AAA [Desulfitobacterium hafniense DCB-2]
gi|423073912|ref|ZP_17062647.1| putative stage V sporulation protein K [Desulfitobacterium
hafniense DP7]
gi|219539012|gb|ACL20751.1| AAA ATPase central domain protein [Desulfitobacterium hafniense
DCB-2]
gi|361855325|gb|EHL07309.1| putative stage V sporulation protein K [Desulfitobacterium
hafniense DP7]
Length = 321
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
SE R R+A SE M E+ EL+ +VGL +K + + + + +RR L V
Sbjct: 33 SELSRGRKAAHHSSEN-GTMAEIIAELNALVGLSTVKRLIHEIQAYIEIQKRRTREKL-V 90
Query: 239 GARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
HM F GNPGTGKT VAR++GRL + +L + E +R DLVGE++GHT KT
Sbjct: 91 AEPLVLHMIFRGNPGTGKTTVARLIGRLFKEMEVLQKGHIIECERADLVGEYIGHTAQKT 150
Query: 299 RRRVGHLLSEITCL 312
R V L I +
Sbjct: 151 RDMVKKALGGILFI 164
>gi|386826847|ref|ZP_10113954.1| putative Rubsico expression protein CbbX [Beggiatoa alba B18LD]
gi|386427731|gb|EIJ41559.1| putative Rubsico expression protein CbbX [Beggiatoa alba B18LD]
Length = 301
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D R++L L+ + P HM+F GNPGTGK
Sbjct: 29 LDKLDREL---IGLKPVKTRIRETASLLLVDRVRRSLNLQ--SESPSLHMSFTGNPGTGK 83
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 84 TTVAMRIAEILHRLGYVRKGHLVAVTRDDLVGQYIGHTAPKTK 126
>gi|329915454|ref|ZP_08276276.1| putative RuBisCo-expression protein CbbX [Oxalobacteraceae
bacterium IMCC9480]
gi|327544887|gb|EGF30249.1| putative RuBisCo-expression protein CbbX [Oxalobacteraceae
bacterium IMCC9480]
Length = 302
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGRL 266
++GL +K +LR A +L+D+ R GL GA P HM+F GNPGTGKT VA + +
Sbjct: 32 LIGLAPVKARLRDIAALLLVDKLRAERGLSTGA--PSLHMSFTGNPGTGKTTVALRMADI 89
Query: 267 LYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
L+ +G L + V R DLVG+++GHT PKTR
Sbjct: 90 LHRLGYLRKGHLVAVTRDDLVGQYIGHTAPKTR 122
>gi|207099795|emb|CAQ52950.1| CD4-specific ankyrin repeat protein D4.1 [synthetic construct]
Length = 169
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N N TPLH++A EIV+ LL++ ++ A + +G TPLH
Sbjct: 31 RILMANGADVN-ANDTWGNTPLHLAAFDGHLEIVEVLLKYG----ADVNASDNFGYTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA +G E ++LL +GA + A N+G+TPLHL+ + V+ LL+Y AD +A
Sbjct: 86 LAATDGHLEIVEVLLKNGADVNALDNDGVTPLHLAA----HNGHLEIVEVLLKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GK+ D +S G+ L E+L
Sbjct: 142 QDKFGKSAFD-ISIDNGNEDLAEIL 165
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A G TPLHL+ + V+ LL+Y AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNANDTWGNTPLHLAAF----DGHLEIVEVLLKYGADVNAS 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
DN G TPL HL+ G ++ E+LL
Sbjct: 77 DNFGYTPL-HLAATDGHLEIVEVLL 100
>gi|374573859|ref|ZP_09646955.1| putative Rubsico expression protein CbbX [Bradyrhizobium sp.
WSM471]
gi|374422180|gb|EHR01713.1| putative Rubsico expression protein CbbX [Bradyrhizobium sp.
WSM471]
Length = 311
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+ +LE EL +GL +K ++R+ A +L++ R+ GL A PP HM+F GNPGTG
Sbjct: 32 LQQLEQEL---IGLKPVKNRVRQIASLLLIERIRQRAGL---ASSPPTLHMSFTGNPGTG 85
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + ++L+ +G + +V V R DLVG+++GHT PKT+
Sbjct: 86 KTTVALRMAKILHGLGFVRRGQVISVTRDDLVGQYIGHTAPKTK 129
>gi|271968344|ref|YP_003342540.1| ATPase [Streptosporangium roseum DSM 43021]
gi|270511519|gb|ACZ89797.1| ATPase central domain-containing protein [Streptosporangium roseum
DSM 43021]
Length = 780
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HM 246
E + ++E EL +++GL +K Q+R A + RK G PP H
Sbjct: 204 EQAAPPPISVEEALGELDSMIGLAPVKEQVRSIAASIEASRLRKEAGYST---EPPMRHF 260
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
F+G PGTGKT VAR + ++ Y G+L T V E QR DLVGEF+G T KT V L
Sbjct: 261 VFVGPPGTGKTSVARTVAKIFYAFGLLETPYVVEAQRADLVGEFLGATAIKTNELVDRAL 320
Query: 307 SEI 309
+
Sbjct: 321 GGV 323
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
++E +L + GL +K Q+ + + R+ GL A+ H F G PGTGK
Sbjct: 500 SLEEALADLDRMAGLEPVKRQVHAITAQLRVARMRQERGLPTPAQMR-HFVFAGPPGTGK 558
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
T VARILGR+ +G+L V E QR DLVG+ +G T KT V L +
Sbjct: 559 TTVARILGRIFAALGLLAQPDVVEAQRADLVGQHLGATAIKTNELVDRALGGV 611
>gi|410667723|ref|YP_006920094.1| stage V sporulation protein K [Thermacetogenium phaeum DSM 12270]
gi|409105470|gb|AFV11595.1| stage V sporulation protein K [Thermacetogenium phaeum DSM 12270]
Length = 312
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
+ R+ L + K + + EL ++GL E+K + + + + + +RR+ L
Sbjct: 33 KNRQPLNQSDTNQLKPELILQELHGLIGLTEVKKLVSEISAYVQIQKRRERARL---CTE 89
Query: 243 PP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
P HM F GNPGTGKT VARI+G+L +G+L + EV+R DLVGE++GHT KTR
Sbjct: 90 PLVLHMIFKGNPGTGKTTVARIMGKLFRSMGVLSRGHLVEVERADLVGEYIGHTAHKTRE 149
Query: 301 RVGHLLSEITCL 312
++ L I +
Sbjct: 150 QIKRALGGILFI 161
>gi|383847933|ref|XP_003699607.1| PREDICTED: tankyrase-1-like [Megachile rotundata]
Length = 1208
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+L+ NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 497 SKSGDLAAVERILQTNPHAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 552
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 553 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 608
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 609 LLLRHGADATKKNRDGATPLDLVRDG 634
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 652 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 705
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++ A
Sbjct: 706 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQLCA--- 761
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD +K+ EG+TPLD
Sbjct: 762 LLLAHGADPFSKNQEGQTPLD 782
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 31 KTGDLARVKALV--TPKTVNARDTAGRKSTPLHFAAGYGRRDVVEFLLSA----GASIQA 84
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 85 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 140
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 141 LLQHGADANIRNTEGKTALE 160
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 211 TPLHLAAGYNRSRVVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 266
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R+E LL AD + + K+ +D +
Sbjct: 267 AVNASDLWAFTPLHEAASKS-RAE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 318
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIV 209
+L+E L + E + L+AC + A + +L+ LS V
Sbjct: 319 ELQERLAY---EYKGHCLLDACRQ--ADLTKLKKYLSQEV 353
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L + ++N ++P TPLH V++ Y K
Sbjct: 321 QERLAYEYKGHCLLDACRQADLTKLKKYLSQ--EVVNFKHPYTGDTPLHCAVASPYPKRK 378
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
++++SL+ L +N TPLH+A + +A +LL H A + A G T
Sbjct: 379 QVIESLIR----KNAALNEKNKDFLTPLHVATDHSHYDAMDVLLRHNAKVNALDGLGQTA 434
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH V R ++ + LL YN D S +G T
Sbjct: 435 LHRCV----REDNVQACRILLSYNVDPSIVSLQGYT 466
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 680 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 735
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 736 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 769
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 58 TPLHFAAGYGRRDVVEFLLSAGASIQARDDGGLHPLHNACSFGHSD----VVRLLLEAGA 113
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +DN TPL H + G + LL H + R
Sbjct: 114 NPNTRDNWNYTPL-HEAAIKGKIDVCIALLQHGADANIR 151
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + +++V+ LLE N ++ + TPLH AA G + LL HGA
Sbjct: 92 PLHNACSFGHSDVVRLLLEAGANPNT----RDNWNYTPLHEAAIKGKIDVCIALLQHGAD 147
Query: 111 IEAKANNGMTPLHLS----------------VWYSIRSEDYATVKTLLE-YNADCSAKDN 153
+ G T L L+ + + RS + + LL N +C A D
Sbjct: 148 ANIRNTEGKTALELADPATKPVLTGEYKKDELLEAARSGNEERLLQLLNPLNVNCHASDG 207
Query: 154 EGKTPLDHLSNGPGSAKLRELLL 176
TPL HL+ G +++ ++LL
Sbjct: 208 RRSTPL-HLAAGYNRSRVVQILL 229
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 200 VNCHASDGRRSTPLHLAAGYNRSRVVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 255
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ LL++ A +A D TPL H + A++ LLL
Sbjct: 256 EVTEALLKHGAAVNASDLWAFTPL-HEAASKSRAEVCSLLL 295
>gi|444432454|ref|ZP_21227609.1| hypothetical protein GS4_23_01270 [Gordonia soli NBRC 108243]
gi|443886802|dbj|GAC69330.1| hypothetical protein GS4_23_01270 [Gordonia soli NBRC 108243]
Length = 590
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Query: 177 WHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL 236
W E K ++ S T A +DE EL+ +GL +K Q+ K L + R GL
Sbjct: 275 WDPESVPKTAPVDEESNT-ALLDEARAELAQQIGLESVKEQVAKLQSAAALAKVRADRGL 333
Query: 237 KVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGP 296
AR H+AF G PGTGKT +AR++ ++ +GIL TD V E R D VGE +G T
Sbjct: 334 SSAAR-SQHLAFTGPPGTGKTTIARVVAKIYCGLGILKTDAVVEASRRDFVGEHLGSTAI 392
Query: 297 KT 298
KT
Sbjct: 393 KT 394
>gi|420929|pir||D47019 RUBISCO-expression protein CfxX - Alcaligenes eutrophus plasmid
pHG1
Length = 317
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTM 258
+L+ EL +GL +K ++R A +L+D+ R A G GA P HM F GNPGTGKT
Sbjct: 39 QLDREL---IGLKPVKARIRDIAALLLVDKLRAARGFSAGA--PSLHMCFTGNPGTGKTT 93
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + ++L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 94 VAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYIGHTAPKTK 134
>gi|320529146|ref|ZP_08030238.1| ATPase, AAA family [Selenomonas artemidis F0399]
gi|320138776|gb|EFW30666.1| ATPase, AAA family [Selenomonas artemidis F0399]
Length = 710
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL-LWHSEE-------QRKRRALEAC 191
T L +D +A +G L NG + + + WH + R + A E C
Sbjct: 364 TALIKGSDYAAFAEDGDYILPDQQNGYTAEDVHRVFDAWHKQALLRAYPAYRTQYAEELC 423
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL-KVGARRPPHMAFLG 250
+ K + +E + +VGL E+K +R + + R + G+ GA R HM F G
Sbjct: 424 TARYDKTQTVYDEFNAMVGLGEVKEIVRNLIAAHKMRKLRASWGITDEGAAR--HMVFTG 481
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGH 304
NPGT KT AR++ R+L G+LP + E R DLVG +VG T PK R++
Sbjct: 482 NPGTAKTTTARLIARILEEEGVLPRCPLVECGRADLVGRYVGWTAPKVRKKFAQ 535
>gi|357019253|ref|ZP_09081507.1| ATPase central domain-containing protein [Mycobacterium
thermoresistibile ATCC 19527]
gi|356480773|gb|EHI13887.1| ATPase central domain-containing protein [Mycobacterium
thermoresistibile ATCC 19527]
Length = 611
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + +R+ GL V A+R H+ F G PGTGKT +
Sbjct: 319 EAEAELAEFIGLEEVKYQVARLKSSVAMAIKRQERGLTV-AQRTNHLVFAGPPGTGKTTI 377
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +GIL + V EV R DLVG+ +G T KT + L + L
Sbjct: 378 ARVVAKIYCGLGILKKETVREVHRADLVGQHIGETEAKTNAVIDSALDGVLFL 430
>gi|318040988|ref|ZP_07972944.1| cbbX protein [Synechococcus sp. CB0101]
Length = 316
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HM 246
L+A E D L ++GL +K ++R+ A +++D RK +GL A P HM
Sbjct: 20 LQAAYEGAQVQDVLAQLDQELIGLRPVKTRIREIAALLVVDRARKQVGLSTTA--PSLHM 77
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+F G PGTGKT VA + ++L+ +G + V R DLVG+++GHT PKTR
Sbjct: 78 SFTGRPGTGKTTVAARMSQILHRLGYVRKGHVVTATRDDLVGQYIGHTAPKTR 130
>gi|307185654|gb|EFN71576.1| Tankyrase-1 [Camponotus floridanus]
Length = 1206
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+L+ NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 500 SKSGDLAAVERILQANPHAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 555
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 556 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 611
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 612 LLLRHGADATKKNRDGATPLDLVRDG 637
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 655 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 708
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++ A
Sbjct: 709 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQLCA--- 764
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD K+ EG+TP+D
Sbjct: 765 LLLAHGADPFLKNQEGQTPVD 785
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ NP +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 34 KTGDLAKVKALV--NPKTVNARDTAGRKSTPLHFAAGYGRKDVVEFLLSA----GASIQA 87
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G + +LLL GA + N TPLH + +I+ + + T
Sbjct: 88 RDDGGLHPLHNACSFGHCDVVRLLLEAGASPNTRDNWNFTPLHEA---AIKGKIDVCI-T 143
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 144 LLQHGADVNIRNTEGKTALE 163
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 683 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 738
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 739 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 772
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L + ++N ++P TP+H V++ Y K
Sbjct: 324 QERLAYEYKGHCLLDACRQADLTKLKKYLSQ--EIVNFKHPYTGDTPMHCAVASPYPKRK 381
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+++++L+ + +N TPLH+A + +A +LL H A + A G T
Sbjct: 382 QVIETLIR----KNAAMNEKNKDFLTPLHVATDHSHYDAMDILLRHNAKVNALDGLGQTA 437
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH R ++ + LL YN D S +G T
Sbjct: 438 LHRCA----REDNVQACRILLSYNVDPSIVSLQGYT 469
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 203 VNCHASDGRRSTPLHLAAGYNRSRVVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 258
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ LL++ A +A D TPL H + A++ LLL
Sbjct: 259 EVTEALLKHGAAVNASDLWTFTPL-HEAASKSRAEVCSLLL 298
>gi|291244405|ref|XP_002742087.1| PREDICTED: tankyrase, TRF1-interacting ankyrin-related ADP-ribose
polymerase-like [Saccoglossus kowalevskii]
Length = 1144
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++GDL + +L +NP L+N R+ TPLH +AGYN+ +V+ LL+ + ++
Sbjct: 469 AKAGDLETVKGILSKNPHLVNCRDVEGRHSTPLHFAAGYNRVAVVEHLLQ----NGADVH 524
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + S + + Y K
Sbjct: 525 AKDKGGLVPLHNACSYGHYEVTELLVKHGAIVNVADLWKFTPLHEA---SAKGK-YEICK 580
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL++ AD + K+ +G TPLD + G
Sbjct: 581 LLLKHGADANKKNRDGNTPLDLVKEG 606
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 2 QKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLR-ENPSLLNERNPVMAQTPLHVSAGYNK 60
+ +QD + A + A+ G L Q+L+ EN + + + TPLH++AGYN
Sbjct: 605 EGDQDVQDLLRGDAALLDAAKKGCLARVQKLVSLENINCRDSQG--RNSTPLHLAAGYNN 662
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
E+ + LLE + ++ A++ G PLH A+ G + A LL+ G + A T
Sbjct: 663 VEVAEHLLE----NGADVNARDKGGLIPLHNASSYGHVDIAALLIKFGTCVNAIDRWSFT 718
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
PLH + R++ A LL + AD + K+ EG+TPLD
Sbjct: 719 PLHEAAQKG-RTQLCAL---LLAHGADPAMKNQEGQTPLD 754
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL+ ++L+ + +N R+ TPLH +AG+ + ++V+ LL+ N + +
Sbjct: 27 RNGDLVRVKKLVTTHN--VNARDTAGRKSTPLHFAAGFGRKDVVEHLLQHGAN----VHS 80
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G E LLL HG A+ N TPLH + +I+ + +
Sbjct: 81 RDDGGLIPLHNACSFGHAEVVTLLLRHGGDANARDNWNYTPLHEA---AIKGKIDVCI-V 136
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ +GKT LD
Sbjct: 137 LLQHGADPNIRNTDGKTALD 156
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT-LLEYN 145
TPLH AA G + + LL HGA + ++ + G+ PLH + + +A V T LL +
Sbjct: 54 TPLHFAAGFGRKDVVEHLLQHGANVHSRDDGGLIPLHNACSFG-----HAEVVTLLLRHG 108
Query: 146 ADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
D +A+DN TPL H + G + +LL H + R
Sbjct: 109 GDANARDNWNYTPL-HEAAIKGKIDVCIVLLQHGADPNIR 147
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 38 SLLNERNPVMAQTPLHVSAG--YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKN 95
++N ++P+ TPLH +A Y K + LL G + L +N TPLH+A
Sbjct: 323 DIVNFKHPLTNDTPLHCTAASVYPKRKQATELLIRKGGN---LNDKNKEFLTPLHVATDK 379
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCS 149
G + + LL HGA + + G T LH S R + LL Y D S
Sbjct: 380 GHFDVMETLLKHGAKVNGLDSLGQTALHRSA----RDGSSQGCRLLLTYGVDPS 429
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 50 TPLHVSAGYNKAEIVKSLLEW---------PGNDKVEL------EAQNMY-GETPLHMAA 93
TPLH ++ K EI K LL+ GN ++L + Q++ G+ L AA
Sbjct: 565 TPLHEASAKGKYEICKLLLKHGADANKKNRDGNTPLDLVKEGDQDVQDLLRGDAALLDAA 624
Query: 94 KNGC-NEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
K GC KL+ TPLHL+ Y+ + + LLE AD +A+D
Sbjct: 625 KKGCLARVQKLVSLENINCRDSQGRNSTPLHLAAGYN----NVEVAEHLLENGADVNARD 680
Query: 153 NEGKTPLDHLSNGPGSAKLRELLL 176
G PL H ++ G + LL+
Sbjct: 681 KGGLIPL-HNASSYGHVDIAALLI 703
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + AE+V LL G + A++ + TPLH AA G + +LL HGA
Sbjct: 88 PLHNACSFGHAEVVTLLLRHGG----DANARDNWNYTPLHEAAIKGKIDVCIVLLQHGAD 143
Query: 111 IEAKANNGMTPLHLS 125
+ +G T L L+
Sbjct: 144 PNIRNTDGKTALDLA 158
>gi|358639816|dbj|BAL27112.1| CbbX protein [Azoarcus sp. KH32C]
Length = 325
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+D L+ EL VGL +K ++R+ A +L+D R+ +GL A PP HM+F GNPGTG
Sbjct: 34 LDGLDREL---VGLVPVKRRVREIAALLLVDRARRRIGL---ATEPPSLHMSFTGNPGTG 87
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + ++L +G + V V R DLVG+++GHT PKT+
Sbjct: 88 KTTVALRIAQILQRLGYVRRGHVVAVTRDDLVGQYIGHTAPKTK 131
>gi|389857450|ref|YP_006359693.1| ATPase [Streptococcus suis ST1]
gi|353741168|gb|AER22175.1| ATPases of the AAA+ class [Streptococcus suis ST1]
Length = 324
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
++K+K + E L+ ++GL +K +R+ L + RK G V H+ F GNP
Sbjct: 32 QSKSKCGQAEKRLNQMIGLQSVKKLIRQQVAFEQLSKLRKERGYHV-EESNGHLLFTGNP 90
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT +AR+ +LY G++ +++ EV R DL+GE+VG T PK +
Sbjct: 91 GTGKTEIARLYTEILYEHGLIAENKIVEVGRADLIGEYVGQTAPKIK 137
>gi|123477072|ref|XP_001321705.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121904537|gb|EAY09482.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 800
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
Query: 16 TIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
T+H A D LL + + +N+++ T LH + N EI K L+ N
Sbjct: 546 TLHKAAYD-DRKEIAELLLSHGAKINDKDED-GYTTLHNATWKNNKEIAKLLISHGAN-- 601
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+ ++ YGETPLH AA+N E +LL++HGA I K N G T LH++ Y+I+
Sbjct: 602 --INEKDKYGETPLHDAARNNGQETTELLISHGANINEKNNKGQTALHIATIYNIK---- 655
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
ATV+ L+ + A+ + K+N+G T L H++ ++ E LL H
Sbjct: 656 ATVELLISHGANINEKNNKGNTAL-HIAASKKFIEIVEYLLSH 697
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 29 FQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETP 88
F +LL + +N+++ TPLH + + EI + L+ N + ++ G+T
Sbjct: 360 FAQLLFSRGAKINDKDKD-GNTPLHWTTYLSSKEIAELLISHGAN----INEKDNKGQTT 414
Query: 89 LHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADC 148
LH AA + E A+LLL+HGA I K +G TPLH ++S T + L+ + A+
Sbjct: 415 LHKAAHDNRKEIAELLLSHGAKINDKDKDGNTPLHWKTYFS----SIETAELLISHGANI 470
Query: 149 SAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ KDN+G+T L H + ++ ELLL H
Sbjct: 471 NEKDNKGQTTL-HKAAHDNRKEIAELLLSH 499
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
++SL E+ + ++ ++ G+T LH AA+ NE A LLL+HGA I + N+G+T LH
Sbjct: 291 IQSLAEYFLSHGAKINNKDEDGKTVLHYAAEYNINEIADLLLSHGAKINERDNDGLTTLH 350
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ Y+ SE++A + L A + KD +G TPL H + S ++ ELL+ H
Sbjct: 351 YAAKYN--SEEFAQL--LFSRGAKINDKDKDGNTPL-HWTTYLSSKEIAELLISH 400
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH ++ E + L+ N + ++ G+T LH AA + E A+LLL+HG
Sbjct: 445 NTPLHWKTYFSSIETAELLISHGAN----INEKDNKGQTTLHKAAHDNRKEIAELLLSHG 500
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G TPLH ++S T + L+ + A+ + KDN+G+T L H +
Sbjct: 501 AKINDKDKDGNTPLHWKTYFS----SIETAELLISHGANINEKDNKGQTTL-HKAAYDDR 555
Query: 169 AKLRELLLWH 178
++ ELLL H
Sbjct: 556 KEIAELLLSH 565
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL + + +NE+N QT LH++ YN V+ L+ N + +N G T LH+
Sbjct: 627 LLISHGANINEKNN-KGQTALHIATIYNIKATVELLISHGAN----INEKNNKGNTALHI 681
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA E + LL+HGA I+ K G T H++ + + E VK LL + A+ + K
Sbjct: 682 AASKKFIEIVEYLLSHGANIKEKNKEGETAHHIAANRTYQKE---IVKLLLSHGANINEK 738
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWH 178
DN G+T L H + S ++ +LL+ H
Sbjct: 739 DNSGRTALHHAAE-YNSDEVAKLLISH 764
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL + + +NE+N T LH++A EIV+ LL N ++ +N GET H+
Sbjct: 660 LLISHGANINEKNN-KGNTALHIAASKKFIEIVEYLLSHGAN----IKEKNKEGETAHHI 714
Query: 92 AA-KNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA + E KLLL+HGA I K N+G T LH + Y+ S++ A K L+ + + +
Sbjct: 715 AANRTYQKEIVKLLLSHGANINEKDNSGRTALHHAAEYN--SDEVA--KLLISHGVNINE 770
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
KD GKT L + SA + L+
Sbjct: 771 KDKFGKTALHYAKENNYSAMAKLLI 795
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH ++ E + L+ N + ++ G+T LH AA + E A+LLL+HG
Sbjct: 511 NTPLHWKTYFSSIETAELLISHGAN----INEKDNKGQTTLHKAAYDDRKEIAELLLSHG 566
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G T LH + W + + K L+ + A+ + KD G+TPL + G
Sbjct: 567 AKINDKDEDGYTTLHNATWKNNKE----IAKLLISHGANINEKDKYGETPLHDAARNNGQ 622
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 623 -ETTELLISH 631
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL + + +NE++ +T LH +A YN E+ K L+ V + ++ +G+T LH
Sbjct: 726 KLLLSHGANINEKDN-SGRTALHHAAEYNSDEVAKLLISHG----VNINEKDKFGKTALH 780
Query: 91 MAAKNGCNEAAKLLLAHGA 109
A +N + AKLL++ GA
Sbjct: 781 YAKENNYSAMAKLLISRGA 799
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
G A+ L+HGA I K +G T LH + Y+I LL + A + +DN+G
Sbjct: 290 GIQSLAEYFLSHGAKINNKDEDGKTVLHYAAEYNINE----IADLLLSHGAKINERDNDG 345
Query: 156 KTPLDHLSNGPGSAKLRELLL 176
T L H + S + +LL
Sbjct: 346 LTTL-HYAAKYNSEEFAQLLF 365
>gi|297618174|ref|YP_003703333.1| ATPase AAA [Syntrophothermus lipocalidus DSM 12680]
gi|297146011|gb|ADI02768.1| AAA ATPase central domain protein [Syntrophothermus lipocalidus DSM
12680]
Length = 372
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 11/110 (10%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-----HMAFLGNP 252
+DE+ E+ ++ GL E+K L + A + D R+ GL PP HM FLGNP
Sbjct: 110 VDEIWAEIDSLTGLAEVKEALHEIAAVVQADRERRKQGL------PPMKQSLHMVFLGNP 163
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GTGKT VAR++G L +G+LP+ + E R+ LV ++G T KT+ ++
Sbjct: 164 GTGKTTVARLVGELFASMGVLPSGHMVETDRSGLVAGYIGQTALKTQEKI 213
>gi|384569030|gb|AFI09260.1| LmrCD-specific DARPin, partial [synthetic construct]
Length = 169
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N N TPLH++A + EIVK LL++ ++ A++++G+TPLH
Sbjct: 31 RILMANGADVN-ANDFTGFTPLHLAAVHGHLEIVKVLLKYG----ADVNAKDVFGKTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++L+ +GA + A G +PLHL+ V+ LL+Y AD SA
Sbjct: 86 LAAWYGHLEIIEVLVKYGADVNALEKGGNSPLHLAAMIG----HLEIVEVLLKYGADVSA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDEFGKTIFD-ISIDDGNEDLAEIL 165
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + G TPLH+AA +G E K+LL +GA + AK G TPLHL+ WY
Sbjct: 39 DVNANDFTGFTPLHLAAVHGHLEIVKVLLKYGADVNAKDVFGKTPLHLAAWYG----HLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
++ L++Y AD +A + G +PL HL+ G ++ E+LL + +
Sbjct: 95 IIEVLVKYGADVNALEKGGNSPL-HLAAMIGHLEIVEVLLKYGAD 138
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A G TPLHL+ + VK LL+Y AD +AK
Sbjct: 21 AARAGQDDEVRILMANGADVNANDFTGFTPLHLAAVHG----HLEIVKVLLKYGADVNAK 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D GKTPL HL+ G ++ E+L+ + +
Sbjct: 77 DVFGKTPL-HLAAWYGHLEIIEVLVKYGAD 105
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G L + LL+ + N ++ V +TPLH++A Y EI++ L+++ G D
Sbjct: 51 LHLAAVHGHLEIVKVLLKYGADV-NAKD-VFGKTPLHLAAWYGHLEIIEVLVKY-GADVN 107
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
LE G +PLH+AA G E ++LL +GA + A+ G T +S+
Sbjct: 108 ALEKG---GNSPLHLAAMIGHLEIVEVLLKYGADVSAQDEFGKTIFDISI 154
>gi|339322652|ref|YP_004681546.1| hypothetical protein CNE_2c13510 [Cupriavidus necator N-1]
gi|338169260|gb|AEI80314.1| hypothetical protein CbbX [Cupriavidus necator N-1]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTM 258
+L+ EL +GL +K ++R A +L+D+ R A G GA P HM F GNPGTGKT
Sbjct: 35 QLDREL---IGLKPVKARIRDIAALLLVDKLRAARGFSAGA--PSLHMCFTGNPGTGKTT 89
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + ++L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 90 VAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYIGHTAPKTK 130
>gi|116695336|ref|YP_840912.1| rubisco accessory protein CbbX, AAA ATPase [Ralstonia eutropha H16]
gi|729237|sp|P40118.1|CBXXC_RALEH RecName: Full=Protein CbxX, chromosomal
gi|304017|gb|AAA21960.1| cfxXc [Ralstonia eutropha H16]
gi|113529835|emb|CAJ96182.1| rubisco accessory protein CbbX, AAA ATPase [Ralstonia eutropha H16]
Length = 317
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTM 258
+L+ EL +GL +K ++R A +L+D+ R A G GA P HM F GNPGTGKT
Sbjct: 39 QLDREL---IGLKPVKARIRDIAALLLVDKLRAARGFSAGA--PSLHMCFTGNPGTGKTT 93
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + ++L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 94 VAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYIGHTAPKTK 134
>gi|251796624|ref|YP_003011355.1| ATPase AAA [Paenibacillus sp. JDR-2]
gi|247544250|gb|ACT01269.1| AAA ATPase central domain protein [Paenibacillus sp. JDR-2]
Length = 326
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+++ EL +VG+ +K + + + + R GL G HM F GNPGTGKT +
Sbjct: 57 DIQKELEPMVGMDNVKALIYEVYALLYITRMRSEAGLS-GGSHVYHMIFKGNPGTGKTTI 115
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
ARI+ +L +G+L + EV+R DLVGE++GHT KTR V
Sbjct: 116 ARIVAKLFQKMGVLSKGHLIEVERADLVGEYIGHTAQKTRDMV 158
>gi|427701342|ref|YP_007044564.1| Rubsico expression protein CbbX [Cyanobium gracile PCC 6307]
gi|427344510|gb|AFY27223.1| putative Rubsico expression protein CbbX [Cyanobium gracile PCC
6307]
Length = 322
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA + K +D+L+ EL +GL +K ++R+ A ++++ R +GL PP
Sbjct: 26 RAAYDAAGIKEVLDQLDREL---IGLRPVKARIREIAALLVINRARTQVGLDTA---PPS 79
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F G PGTGKT VA + ++L+ +G + V R DLVG+++GHT PKTR
Sbjct: 80 LHMSFTGRPGTGKTTVAARMSKILHGLGYVRKGHVVTATRDDLVGQYIGHTAPKTR 135
>gi|374608010|ref|ZP_09680810.1| AAA ATPase central domain protein [Mycobacterium tusciae JS617]
gi|373554572|gb|EHP81151.1| AAA ATPase central domain protein [Mycobacterium tusciae JS617]
Length = 605
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A R H+ F G PGTGKT +
Sbjct: 313 EAEAELAEFIGLEEVKYQVARLKSSVAMAIRRQERGLTV-ANRANHLVFAGPPGTGKTTI 371
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +GIL + V EV R DL+G+ +G T KT + L + L
Sbjct: 372 ARVVAKIYCGLGILKKETVREVHRADLIGQHIGETEAKTNGIIDSALDGVLFL 424
>gi|123235853|ref|XP_001286852.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121853190|gb|EAX73922.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 280
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 15/133 (11%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A N EI + ++ + V++EA++ G+TPLH AAKN E A++L+++
Sbjct: 135 ETVLHAAARNNSKEIAEFIINY----HVDIEAKDEIGQTPLHEAAKNNSKETAEILISNN 190
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK N G T LHL+V ++E Y + L+ NAD +AKDN G+T + + S
Sbjct: 191 ADVNAKDNFGQTALHLAV----QNEKYEISELLILNNADINAKDNSGRTAIQY----AAS 242
Query: 169 AKLRE---LLLWH 178
L+E LL+ H
Sbjct: 243 KNLKEIATLLIMH 255
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
+ +T LH +A N E + L+ +++A+N ET LH AA+N E A+ ++
Sbjct: 100 LGRTALHYAAIGNSKETAELLISAGA----DIKAKNKNEETVLHAAARNNSKEIAEFIIN 155
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGP 166
+ IEAK G TPLH + ++ T + L+ NAD +AKDN G+T L HL+
Sbjct: 156 YHVDIEAKDEIGQTPLHEAA----KNNSKETAEILISNNADVNAKDNFGQTAL-HLAVQN 210
Query: 167 GSAKLRELLLWHSEE 181
++ ELL+ ++ +
Sbjct: 211 EKYEISELLILNNAD 225
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G T L AA + +LLL+HGA I K NG T LH + Y+ + VK+
Sbjct: 1 GNTALPFAAWGDLIDIVQLLLSHGANINEKNENGWTALHYTANYNALNATCLLVKS---- 56
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRR 186
AD KDN G+TPL HL+ + LL+ H + K +
Sbjct: 57 GADIHIKDNNGRTPL-HLAAVNNCIETAALLISHIKNVDKDK 97
>gi|316935265|ref|YP_004110247.1| CbbX protein [Rhodopseudomonas palustris DX-1]
gi|315602979|gb|ADU45514.1| CbbX protein [Rhodopseudomonas palustris DX-1]
Length = 307
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL VGL +K ++R+ A +L++ RK +GL G P HM+F GNPGTGK
Sbjct: 33 LDQLDREL---VGLKPVKTRIREIAALLLVERLRKRMGLATG--NPTLHMSFTGNPGTGK 87
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 88 TTVALRIASILHKLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 130
>gi|404446250|ref|ZP_11011368.1| ATPase central domain-containing protein [Mycobacterium vaccae ATCC
25954]
gi|403650802|gb|EJZ06003.1| ATPase central domain-containing protein [Mycobacterium vaccae ATCC
25954]
Length = 615
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A+R H+ F G PGTGKT +
Sbjct: 317 EAEAELAEFIGLDEVKYQVARLKSSVAMSIRRQERGLAV-AQRTNHLVFAGPPGTGKTTI 375
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 376 ARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 428
>gi|441169610|ref|ZP_20969187.1| ATPase [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440615431|gb|ELQ78624.1| ATPase [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 635
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL +VGL +K Q+R + + + R GL V +PP H F G GTGKT VAR
Sbjct: 348 ELERMVGLEPVKRQVRALSAQLRMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVAR 404
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
ILGR+ Y +G+L D + E QR DLVGEF+G T K + L +
Sbjct: 405 ILGRVFYALGLLGGDHLVEAQRADLVGEFLGQTAVKANELIDSALGGV 452
>gi|398788439|ref|ZP_10550595.1| ATPase, partial [Streptomyces auratus AGR0001]
gi|396992177|gb|EJJ03292.1| ATPase, partial [Streptomyces auratus AGR0001]
Length = 361
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL +VG+ +K Q+R + + + R + GL V +PP H F G GTGKT VAR
Sbjct: 77 ELERMVGMEPVKRQVRALSAQLRMARLRASQGLPV---QPPKRHFVFSGPSGTGKTTVAR 133
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
ILGR+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 134 ILGRVFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 181
>gi|260434571|ref|ZP_05788541.1| CbbX protein [Synechococcus sp. WH 8109]
gi|260412445|gb|EEX05741.1| CbbX protein [Synechococcus sp. WH 8109]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D+ R+ L L A P HM+F G+PGTGK
Sbjct: 20 LDQLDREL---IGLAPVKTRIREIAALLLVDQARQQLELPSTA--PSLHMSFTGHPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|374249428|ref|YP_005088647.1| cbbX gene product [Phaeocystis antarctica]
gi|340008119|gb|AEK26751.1| CbbX [Phaeocystis antarctica]
Length = 290
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ + +D+LE +L VGL +K ++++ A +L+ RK LGL + + HM+F G
Sbjct: 12 TDIQGIIDQLEEDL---VGLAPVKARIKEIAALLLVQRLRKNLGLGINSTSVGLHMSFTG 68
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+PGTGKT VA + +LY +G + + V R DLVG+++GHT PKT+
Sbjct: 69 SPGTGKTAVANRMADILYKLGYIRKGHLITVTRDDLVGQYIGHTAPKTK 117
>gi|147678819|ref|YP_001213034.1| hypothetical protein PTH_2484 [Pelotomaculum thermopropionicum SI]
gi|146274916|dbj|BAF60665.1| hypothetical protein PTH_2484 [Pelotomaculum thermopropionicum SI]
Length = 342
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 12/139 (8%)
Query: 180 EEQRKRRALEA-CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
+ QR+++ +EA + + + E+ E+ + GL +K LR+ + + R+ GL
Sbjct: 67 QHQRQQKKIEAHWRQRQDALQEVWAEIDGLTGLAPVKEFLREVEAVVRANVIRRQKGL-- 124
Query: 239 GARRPP-----HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGH 293
PP HM F GNPGTGKT VAR++G+LL +G LP+ + E R+ LVG++VG
Sbjct: 125 ----PPLKQSLHMMFTGNPGTGKTTVARLVGKLLAAMGALPSGHLVETDRSGLVGQYVGQ 180
Query: 294 TGPKTRRRVGHLLSEITCL 312
T PKT VG + + +
Sbjct: 181 TAPKTWEMVGKAMGGVLFV 199
>gi|330850914|ref|YP_004376664.1| Rubisco expression protein [Fistulifera sp. JPCC DA0580]
gi|328835734|dbj|BAK19030.1| Rubisco expression protein [Fistulifera sp. JPCC DA0580]
Length = 290
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 8/112 (7%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMA 247
A +E ++ L+ EL VGL +K ++R+ A +L+D+ RK LG+ G+ P HM+
Sbjct: 13 AKTEIAKVLNLLDEEL---VGLAPVKSRIREIAALLLIDKLRKNLGIVAGS---PGLHMS 66
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F G+PGTGKT V + +LY +G + + V R DLVG+++GHT PKT+
Sbjct: 67 FTGSPGTGKTTVGLKMADILYQLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 118
>gi|297562256|ref|YP_003681230.1| ATPase AAA [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296846704|gb|ADH68724.1| AAA ATPase central domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 823
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP-PHMAFLGNPGTGK 256
+D+ EL ++VGL +K Q+R A + R G V RP H+ F G PGTGK
Sbjct: 250 VDQALAELEDMVGLDPVKQQVRGIAASIEAARLRADAGFPV--ERPLRHLVFSGPPGTGK 307
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T VAR L + + G+LPT RV E QR DLVGE++G T +T
Sbjct: 308 TSVARTLATIFHSFGLLPTSRVVEAQRADLVGEYLGATAIRT 349
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL ++GL +K Q+R + + + R+ GL + P H F G PGTGKT VAR
Sbjct: 551 ELDAMIGLEPVKEQVRSIVAQLRVAKLREEQGLL---NQAPMRHFVFSGPPGTGKTTVAR 607
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+LGR+ +G+L V E QR DLVGE +G T KT R V L +
Sbjct: 608 VLGRVFAALGLLGRADVVEAQRADLVGEHLGATAVKTNRLVDRALGGV 655
>gi|359790450|ref|ZP_09293349.1| CbbX protein [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253604|gb|EHK56711.1| CbbX protein [Mesorhizobium alhagi CCNWXJ12-2]
Length = 313
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S D+L+ EL VGL +K ++R+ A +L+D R+ G + A P HM F
Sbjct: 24 ASSIDDVFDKLDREL---VGLKPVKTRIREIAALLLVDRLRRKFG--ISAETPTLHMNFT 78
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG++VGHT PKTR
Sbjct: 79 GNPGTGKTTVALRMAEILHRLGYVREGHLVSVTRDDLVGQYVGHTAPKTR 128
>gi|123497017|ref|XP_001327095.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121910019|gb|EAY14872.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 789
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 7/111 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
TPLH+S + + LL G+D L ++++ G TPLH+A +N NE AKLL++H
Sbjct: 673 CNTPLHISLRNIYFKNISELLISNGSD---LNSKDINGRTPLHIAIRNHLNEIAKLLISH 729
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
GA + K N+G TPLH YS S++ + L + AD +AKDNE KTP
Sbjct: 730 GADLNIKDNSGKTPLH----YSAESDNEECFELLKSHGADINAKDNENKTP 776
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
L +A YN EI + + N + + + N G T LH+A++N C EA + LL H A +
Sbjct: 208 LQYAAAYNNKEICELIFNQSINYQKYINSCNEEGMTALHLASQNNCKEAVEFLLLHDANV 267
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ + G TPLH + ++ + ++ LL +NA A D + +TPL
Sbjct: 268 NAQNSKGETPLHRAAFWDSQE----ILEILLSHNASIDATDKKQRTPL 311
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKN-GCNEAAKLLLAH 107
QT LH + +N VK L+E+ + ++ N TPLH++ +N ++LL+++
Sbjct: 641 QTALHHATDHNNKNNVKLLIEYGADVNIKDNECN----TPLHISLRNIYFKNISELLISN 696
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
G+ + +K NG TPLH++ IR+ K L+ + AD + KDN GKTPL H S
Sbjct: 697 GSDLNSKDINGRTPLHIA----IRNHLNEIAKLLISHGADLNIKDNSGKTPL-HYSAESD 751
Query: 168 SAKLRELLLWH 178
+ + ELL H
Sbjct: 752 NEECFELLKSH 762
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN-EAAKLLLAHGAFIEAKANNGMTPLH 123
K ++E + + ++ Q+ +G T LH+A N + E +LL++HG I AK ++ T LH
Sbjct: 518 KEIIELLLSHRAKVNVQDKFGNTALHIAVDNNVDKEILELLISHGIDINAKDSDDRTALH 577
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+S Y R Y + L+ + D ++KD G +PL + + + ELL
Sbjct: 578 ISSQYDSR---YELTELLISHGLDVNSKDKYGTSPLHYAARSSNGDRTIELLF 627
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 39 LLNERNPVMAQ-----TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAA 93
LL+ R V Q T LH++ N + K +LE + +++ A++ T LH+++
Sbjct: 524 LLSHRAKVNVQDKFGNTALHIAVDNN---VDKEILELLISHGIDINAKDSDDRTALHISS 580
Query: 94 K-NGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED-YATVKTLLEYNADCSAK 151
+ + E +LL++HG + +K G +PLH Y+ RS + T++ L + AD + K
Sbjct: 581 QYDSRYELTELLISHGLDVNSKDKYGTSPLH----YAARSSNGDRTIELLFKNGADVNIK 636
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLW 177
DN G+T L H ++ ++ L+ +
Sbjct: 637 DNSGQTALHHATDHNNKNNVKLLIEY 662
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Query: 43 RNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAK 102
R + + L+++ N+ I++ +L N L A M G T LH+AA+ EAA+
Sbjct: 335 RKDLKGRDALYIATKQNQKNILEEILTHGAN----LNATYMEGYTALHIAAEKTSLEAAE 390
Query: 103 LLLAHGAFIEAKANNGMTPLHLSV--WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+L++HG I+ NG T LH++V Y+ SE L+ + A+ KD G T L
Sbjct: 391 ILISHGIKIDEIDRNGRTALHIAVENMYTELSE------FLITHGANLDIKDVNGNTAL 443
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL N S LN ++ + +TPLH++ + EI K L+ +L ++ G+TPLH
Sbjct: 692 LLISNGSDLNSKD-INGRTPLHIAIRNHLNEIAKLLISHGA----DLNIKDNSGKTPLHY 746
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVW 127
+A++ E +LL +HGA I AK N TP ++ +
Sbjct: 747 SAESDNEECFELLKSHGADINAKDNENKTPSEIAAF 782
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A ++ EI++ LL + ++A + TPL +A K+ + AK L+AHG
Sbjct: 275 ETPLHRAAFWDSQEILEILLSHNAS----IDATDKKQRTPLLVALKHHNIDTAKTLIAHG 330
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + K G L+++ + ++ +L + A+ +A EG T L H++ S
Sbjct: 331 AKVNRKDLKGRDALYIAT----KQNQKNILEEILTHGANLNATYMEGYTAL-HIAAEKTS 385
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 386 LEAAEILISH 395
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
V T LH + EI ++E + + +N GET H A ++G A K +
Sbjct: 437 VNGNTALHYAT-----EIHDHIVEMLISHGAKTNIKNKSGETAFHHAVEHGYKSAIKHFI 491
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
+HG + K G T L +++ E ++ LL + A + +D G T L +
Sbjct: 492 SHGINVNFKDRYGRTALIIALNIDCSKE---IIELLLSHRAKVNVQDKFGNTALHIAVDN 548
Query: 166 PGSAKLRELLLWH-----SEEQRKRRALEACSETKAKMD 199
++ ELL+ H +++ R AL S+ ++ +
Sbjct: 549 NVDKEILELLISHGIDINAKDSDDRTALHISSQYDSRYE 587
>gi|424841211|ref|ZP_18265836.1| AAA+ family ATPase [Saprospira grandis DSM 2844]
gi|395319409|gb|EJF52330.1| AAA+ family ATPase [Saprospira grandis DSM 2844]
Length = 882
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+E+ L ++GL +K +LR A + + R+ G H F GNPGTGKT
Sbjct: 298 FEEVMQGLDRLIGLAAIKQKLRDHANYLQFLQLRREKGFAELEETSLHAVFQGNPGTGKT 357
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA+++GRL +G+L V EV R DLVGE++G T PK R
Sbjct: 358 TVAKMMGRLYSSMGLLSKGHVHEVDRVDLVGEYIGQTAPKVR 399
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
H F+GNPGTGKT VARIL ++ +GIL + E R LV ++G T KT R+
Sbjct: 632 HTVFVGNPGTGKTTVARILTKIYKALGILERGHMVETDRQGLVAGYLGQTAIKTSERI 689
>gi|374337311|ref|YP_005094012.1| AAA ATPase [Streptococcus macedonicus ACA-DC 198]
gi|372283412|emb|CCF01590.1| AAA+ class-like ATPase [Streptococcus macedonicus ACA-DC 198]
Length = 368
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 164 NGPGSAKL----RELLLWHSEEQRKRRALEAC-SETKAKMDELENELSNIVGLHELKIQL 218
N P ++K RELL ++ ++ E + EL + L +VGL +K Q+
Sbjct: 58 NSPKTSKFLNEARELLFTFLGSKQIENMVDVLKEEANFSLPELLHNLDTLVGLENVKRQV 117
Query: 219 RKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRV 278
+ R GL + R HMAFLGNPGTGKT VARI+G + +G+L +
Sbjct: 118 TDLITYNQIQHLRTKKGL-AKSNRTLHMAFLGNPGTGKTTVARIVGHMYKAIGLLSKGQF 176
Query: 279 TEVQRTDLVGEFVGHTGPKTRRRV 302
E RTDL+ E+ G T K +R +
Sbjct: 177 IEASRTDLIAEYQGQTAIKVKRLI 200
>gi|123398905|ref|XP_001301368.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121882541|gb|EAX88438.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 287
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YNK EI + L+ ++ ++ A++ G TPLH AA N E A++L+++GA
Sbjct: 113 TPLHYAADYNKKEIAEILI----SNGADINAKDKDGFTPLHYAASNIWKEIAEILISNGA 168
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH Y+ R+ T + L+ AD +AKD +G TPL H +
Sbjct: 169 DINAKDKDGCTPLH----YAARNNKKETAEILISNGADINAKDKDGFTPL-HYAADYNKK 223
Query: 170 KLRELLL 176
++ E+L+
Sbjct: 224 EIAEILI 230
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH +A N E + L+ ++ ++ A++ YG TPLH AA N E A++L+++GA
Sbjct: 15 PLHYAARENSKETAEILI----SNGADINAEDKYGCTPLHYAASNIWKEIAEILISNGAD 70
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
I AK +G TPLH Y+ R+ + L+ AD +AKD +G TPL H + +
Sbjct: 71 INAKDKDGFTPLH----YAARNNKKEIAEILVSNGADINAKDKDGFTPL-HYAADYNKKE 125
Query: 171 LRELLL 176
+ E+L+
Sbjct: 126 IAEILI 131
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A + I K + E ++ ++ A++ G TPLH AA+N E A++L+++GA
Sbjct: 47 TPLHYAA----SNIWKEIAEILISNGADINAKDKDGFTPLHYAARNNKKEIAEILVSNGA 102
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I AK +G TPLH + Y+ + + L+ AD +AKD +G TPL
Sbjct: 103 DINAKDKDGFTPLHYAADYNKKE----IAEILISNGADINAKDKDGFTPL 148
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YNK EI + L+ ++ ++ A++ G TPLH AA E A++L+++GA
Sbjct: 212 TPLHYAADYNKKEIAEILI----SNGADINAKDKDGFTPLHYAADYNKKEIAEILISNGA 267
Query: 110 FIEAKANNGMTP 121
I AK G TP
Sbjct: 268 DINAKTEIGFTP 279
>gi|124022526|ref|YP_001016833.1| RuBisCo-expression protein CbbX [Prochlorococcus marinus str. MIT
9303]
gi|123962812|gb|ABM77568.1| probable RuBisCo-expression protein CbbX [Prochlorococcus marinus
str. MIT 9303]
Length = 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L++EL +GL +K ++R+ A +L+D R+ L + P HM+F G PGTGK
Sbjct: 20 LDQLDSEL---IGLKPVKTRIREIAALLLVDRARQDFDL--ASTMPSLHMSFTGRPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VA + ++L+ +G L V V R DLVG++VGHT PKTR +
Sbjct: 75 TTVASRISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMI 120
>gi|322799153|gb|EFZ20592.1| hypothetical protein SINV_04047 [Solenopsis invicta]
Length = 1240
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+L+ NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 504 SKSGDLAAVERILQANPHAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 559
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 560 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 615
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 616 LLLRHGADATKKNRDGATPLDLVRDG 641
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 659 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 712
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++
Sbjct: 713 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQ---LCA 768
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD K+ EG+TP+D
Sbjct: 769 LLLAHGADPFLKNQEGQTPVD 789
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ NP +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 38 KTGDLAKVKALV--NPKTVNARDTAGRKSTPLHFAAGYGRKDVVEFLLSA----GASIQA 91
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G + +LLL GA + N TPLH + +I+ + + T
Sbjct: 92 RDDGGLHPLHNACSFGHCDVVRLLLEAGASPNTRDNWNFTPLHEA---AIKGKIDVCI-T 147
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 148 LLQHGADVNIRNTEGKTALE 167
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 17/157 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 218 TPLHLAAGYNRSRVVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 273
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R+E LL AD + + K+ +D +
Sbjct: 274 AVNASDLWTFTPLHEAASKS-RAE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 325
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELS 206
+L+E L + E + L+AC + A + +L+ LS
Sbjct: 326 ELQERLAY---EYKGHCLLDACRQ--ADLTKLKKYLS 357
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 687 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 742
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 743 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 776
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L + ++N ++P TP+H V++ Y K
Sbjct: 328 QERLAYEYKGHCLLDACRQADLTKLKKYLSQ--EIVNFKHPYTGDTPMHCAVASPYPKRK 385
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+++++L+ + +N TPLH+A + +A +LL H + A G T
Sbjct: 386 QVIEALIR----KNAAMNEKNKDFLTPLHVATDHSHYDAMDILLRHNVKVNALDGLGQTA 441
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH R ++ + LL YN D S +G T
Sbjct: 442 LHRCA----REDNVQACRILLSYNIDPSIVSLQGYT 473
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 207 VNCHASDGRRSTPLHLAAGYNRSRVVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 262
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ LL++ A +A D TPL H + A++ LLL
Sbjct: 263 EVTEALLKHGAAVNASDLWTFTPL-HEAASKSRAEVCSLLL 302
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 29 FQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETP 88
+ L+R+N ++ NE+N TPLHV+ ++ + + LL V++ A + G+T
Sbjct: 388 IEALIRKNAAM-NEKNKDFL-TPLHVATDHSHYDAMDILLRH----NVKVNALDGLGQTA 441
Query: 89 LHMAAKNGCNEAAKLLLAH-------------GAFIEAK--------ANNGMTPLHLSVW 127
LH A+ +A ++LL++ A I A+ NG + +
Sbjct: 442 LHRCAREDNVQACRILLSYNIDPSIVSLQGYTAAQISAENVLKILQDPPNGTDDVEAQLL 501
Query: 128 YSIRSEDYATVKTLLEYN---ADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ +S D A V+ +L+ N +C D TPL H + G + E LL H +
Sbjct: 502 EASKSGDLAAVERILQANPHAVNCRDLDGRHSTPL-HFAAGFNRVPVVEYLLAHGAD 557
>gi|393775879|ref|ZP_10364184.1| CbbX [Ralstonia sp. PBA]
gi|392717135|gb|EIZ04704.1| CbbX [Ralstonia sp. PBA]
Length = 303
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 6/111 (5%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAF 248
A S + + +L+ EL +GL +K ++R A +L+D R A GL GA P HM F
Sbjct: 21 AASGIQELLAQLDREL---IGLAPVKSRIRDIAALLLVDRLRSARGLSAGA--PSLHMCF 75
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 76 TGNPGTGKTTVAMRMAEILHRLGYVRRGHLVAVTRDDLVGQYIGHTAPKTK 126
>gi|90655506|gb|ABD96345.1| probable RuBisCo-expression protein CbbX [uncultured marine type-A
Synechococcus GOM 3O12]
Length = 301
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+++L+ EL +GL +K ++R+ A +L+D+ R+ L L A P HM+F GNPGTGK
Sbjct: 20 LEQLDQEL---IGLVPVKTRIREIAALLLVDQARQQLELPSTA--PSLHMSFTGNPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|33863467|ref|NP_895027.1| RuBisCo-expression protein CbbX [Prochlorococcus marinus str. MIT
9313]
gi|33640916|emb|CAE21372.1| probable RuBisCo-expression protein CbbX [Prochlorococcus marinus
str. MIT 9313]
Length = 305
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L+D RK L L + P HM+F G PGTGK
Sbjct: 20 LDQLDCEL---IGLKPVKTRIREIAALLLVDRARKDLDL--ASTMPSLHMSFTGRPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VA + ++L+ +G L V V R DLVG++VGHT PKTR +
Sbjct: 75 TTVAIRISQILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMI 120
>gi|317506248|ref|ZP_07964067.1| ATPase [Segniliparus rugosus ATCC BAA-974]
gi|316255494|gb|EFV14745.1| ATPase [Segniliparus rugosus ATCC BAA-974]
Length = 597
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKMDEL-ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A +E KA + + E+EL +GL E+K Q+ + + + RR+ GL VG +R H+ F
Sbjct: 293 AAAERKAALLSIAEHELDQFIGLDEVKDQVARLKSSVAMALRRQERGLAVG-QRAHHLVF 351
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DLVG+ +G T KT + L
Sbjct: 352 AGPPGTGKTTIARVVAKIYCGLGLLKKETIREVHRPDLVGQHIGETEAKTNAVIDSALDG 411
Query: 309 ITCL 312
+ L
Sbjct: 412 VLFL 415
>gi|379731202|ref|YP_005323398.1| AAA ATPase [Saprospira grandis str. Lewin]
gi|378576813|gb|AFC25814.1| AAA family ATPase [Saprospira grandis str. Lewin]
Length = 868
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+E+ L ++GL +K +LR A + + R+ G H F GNPGTGKT
Sbjct: 284 FEEVMQGLDRLIGLAAIKQKLRDHANYLQFLQLRRDKGFAETEEISLHAVFQGNPGTGKT 343
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA+++GRL +G+L V EV R DLVGE++G T PK R
Sbjct: 344 TVAKMMGRLYSSMGLLSKGHVHEVDRVDLVGEYIGQTAPKVR 385
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
H F+GNPGTGKT VARIL ++ +GIL + E R LV +VG T KT R+
Sbjct: 618 HTVFVGNPGTGKTTVARILTKIYKALGILERGHMVETDRQGLVAGYVGQTAIKTSERI 675
>gi|119963038|ref|YP_947692.1| ATPase [Arthrobacter aurescens TC1]
gi|403527134|ref|YP_006662021.1| stage V sporulation protein K [Arthrobacter sp. Rue61a]
gi|119949897|gb|ABM08808.1| putative ATPase, AAA family domain protein [Arthrobacter aurescens
TC1]
gi|403229561|gb|AFR28983.1| stage V sporulation protein K [Arthrobacter sp. Rue61a]
Length = 355
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 20/172 (11%)
Query: 141 LLEYNADCSAKDNEGKTPLD-------HLSNG---PGSAKLRELLLWHSEEQRKRRALEA 190
+++ N D S + PLD HL+N PGS ++ +L+ + A
Sbjct: 1 MVQDNEDYSGCMAASRNPLDDLRETIGHLANQLKLPGSERVDDLV---------GDLIGA 51
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLG 250
+ E++ EL +VGL +K Q+R + + RRK GL A H+ FLG
Sbjct: 52 RPGPARPLSEVQAELDALVGLETVKEQVRALVALLQVQARRKTHGLPEVAT-SQHLVFLG 110
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
NPGTGKT VAR+L + VG+L + EV R+ LVG++VG T KT R +
Sbjct: 111 NPGTGKTTVARLLAEMYRAVGLLQKGHLVEVDRSGLVGQYVGATAIKTDRVI 162
>gi|422848162|ref|ZP_16894838.1| stage V sporulation protein K [Streptococcus sanguinis SK115]
gi|325690694|gb|EGD32695.1| stage V sporulation protein K [Streptococcus sanguinis SK115]
Length = 366
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+++L+ EL+ ++GL +K ++ + RK GLK+ R HMAF GNPGTGKT
Sbjct: 98 LEDLQKELNQLIGLENVKKEINNLVAYQKVQSLRKIEGLKI-PFRTLHMAFTGNPGTGKT 156
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+GR+ +G+L E RTDL+ + G T K ++ +
Sbjct: 157 TVARIIGRMYKQLGLLSKGHFIEASRTDLIAGYQGQTALKVKKVI 201
>gi|357388103|ref|YP_004902942.1| hypothetical protein KSE_11520 [Kitasatospora setae KM-6054]
gi|311894578|dbj|BAJ26986.1| hypothetical protein KSE_11520 [Kitasatospora setae KM-6054]
Length = 665
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 5/115 (4%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGT 254
++D+ EL +VGL +K Q+R + + + R GL V +PP H F G GT
Sbjct: 384 ELDQALAELEAMVGLDPVKRQVRALSAQLRMARLRADRGLPV---QPPKRHFVFSGPSGT 440
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GKT VARILGR+ + +G+L D + E QR DLVGEF+G T K + L +
Sbjct: 441 GKTTVARILGRVFHALGLLSGDHLVEAQRADLVGEFLGQTAVKANELIDSALDGV 495
>gi|430002611|emb|CCF18392.1| putative CbbX-like protein, containing AAA-ATPase domain [Rhizobium
sp.]
Length = 310
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+DEL+ EL+ GL +K ++R+ A +L++ RK LGL P HM+F GNPGTGK
Sbjct: 30 LDELDRELT---GLKPVKQRIRETAALLLVERARKQLGLTT--ETPTLHMSFTGNPGTGK 84
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 85 TTVALRMASLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 127
>gi|398788312|ref|ZP_10550503.1| ATPase AAA [Streptomyces auratus AGR0001]
gi|396992286|gb|EJJ03398.1| ATPase AAA [Streptomyces auratus AGR0001]
Length = 811
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
DE+ EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 546 DEVLGELDTLVGLESVKREVRSLINMIEVGRRRQQAGLKAASVRR-HLVFTGSPGTGKTT 604
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 605 VARLYGEILAALGVLDRGHLVEVSRVDLVGEHIGSTAIRTQ 645
>gi|375138604|ref|YP_004999253.1| type VII secretion AAA-ATPase EccA [Mycobacterium rhodesiae NBB3]
gi|359819225|gb|AEV72038.1| type VII secretion AAA-ATPase EccA [Mycobacterium rhodesiae NBB3]
Length = 605
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A R H+ F G PGTGKT +
Sbjct: 313 EAEAELAEFIGLEEVKYQVARLKSSVAMAIRRQERGLTV-ANRTNHLVFAGPPGTGKTTI 371
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +GIL + V EV R DL+G+ +G T KT + L + L
Sbjct: 372 ARVVAKIYCGLGILKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 424
>gi|37576203|gb|AAQ93811.1| ankyrin repeat protein mbp3_5 [synthetic construct]
Length = 169
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 83/146 (56%), Gaps = 12/146 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH+ A + EIV+ LL++ ++ A +++G+TPLH
Sbjct: 31 RILMANGADVN-ADDTEGNTPLHLVAVHGHLEIVEVLLKYGA----DVNAHDVWGQTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV-WYSIRSEDYATVKTLLEYNADCS 149
+AA E ++LL +GA + A + G+TPLHL+ W + V+ LL+Y AD +
Sbjct: 86 LAAYYDHLEIVEVLLKYGADVNADDDTGITPLHLAARWGHLE-----IVEVLLKYGADVN 140
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELL 175
A+D GKT D +S G+ L E+L
Sbjct: 141 AQDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 5/100 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + G TPLH+ A +G E ++LL +GA + A G TPLHL+ +Y +
Sbjct: 39 DVNADDTEGNTPLHLVAVHGHLEIVEVLLKYGADVNAHDVWGQTPLHLAAYY----DHLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL+Y AD +A D+ G TPL HL+ G ++ E+LL
Sbjct: 95 IVEVLLKYGADVNADDDTGITPL-HLAARWGHLEIVEVLL 133
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G L + LL+ + + V QTPLH++A Y+ EIV+ LL++
Sbjct: 51 LHLVAVHGHLEIVEVLLKYGADV--NAHDVWGQTPLHLAAYYDHLEIVEVLLKYGA---- 104
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
++ A + G TPLH+AA+ G E ++LL +GA + A+ G T +S+
Sbjct: 105 DVNADDDTGITPLHLAARWGHLEIVEVLLKYGADVNAQDKFGKTAFDISI 154
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A G TPLHL + V+ LL+Y AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNADDTEGNTPLHLVAVHG----HLEIVEVLLKYGADVNAH 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G+TPL HL+ ++ E+LL
Sbjct: 77 DVWGQTPL-HLAAYYDHLEIVEVLL 100
>gi|417092045|ref|ZP_11956779.1| ATPases of the AAA+ class [Streptococcus suis R61]
gi|353532614|gb|EHC02283.1| ATPases of the AAA+ class [Streptococcus suis R61]
Length = 592
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ K+K + E L+ ++GL +K +R+ L + RK G V H+ F GNP
Sbjct: 300 QFKSKCGQAEKRLNQMIGLQSVKKLIRQQVAFEQLSKLRKERGYHV-EESNGHLLFTGNP 358
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VAR+ +LY G++ +++ EV R DL+GE+VG T PK +
Sbjct: 359 GTGKTEVARLYTEILYEHGLIAENKIVEVGRADLIGEYVGQTAPKIK 405
>gi|145220933|ref|YP_001131611.1| ATPase central domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|315442097|ref|YP_004074976.1| ATPase AAA [Mycobacterium gilvum Spyr1]
gi|145213419|gb|ABP42823.1| AAA ATPase, central domain protein [Mycobacterium gilvum PYR-GCK]
gi|315260400|gb|ADT97141.1| AAA+ family ATPase [Mycobacterium gilvum Spyr1]
Length = 616
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A+R H+ F G PGTGKT +
Sbjct: 318 EAEAELAEFIGLDEVKYQVARLKSSVAMAIRRQERGLAV-AQRTNHLVFAGPPGTGKTTI 376
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 377 ARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 429
>gi|332559755|ref|ZP_08414077.1| ATPase central domain-containing protein [Rhodobacter sphaeroides
WS8N]
gi|332277467|gb|EGJ22782.1| ATPase central domain-containing protein [Rhodobacter sphaeroides
WS8N]
Length = 309
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 14 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 67
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 68 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|377832823|ref|ZP_09815762.1| hypothetical protein LBLM1_20240 [Lactobacillus mucosae LM1]
gi|377553341|gb|EHT15081.1| hypothetical protein LBLM1_20240 [Lactobacillus mucosae LM1]
Length = 308
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
L E ++EL ++L+N+VGL+ +K + + + + R+ G+K+ A H+
Sbjct: 30 LSTDEEPNETLEELLDQLNNLVGLNSVKKDVNSLINLLKVSKIREQRGIKMPAM-SLHLV 88
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLS 307
F GNPGTGKT VAR+L ++ + +GIL ++ EV R+ LVG +VG T KT+ + L
Sbjct: 89 FYGNPGTGKTTVARLLAKIYHKMGILSKGQLVEVDRSGLVGGYVGQTAIKTKDVIDKALG 148
Query: 308 EI 309
I
Sbjct: 149 GI 150
>gi|90422840|ref|YP_531210.1| AAA ATPase, central region [Rhodopseudomonas palustris BisB18]
gi|90104854|gb|ABD86891.1| AAA ATPase, central region [Rhodopseudomonas palustris BisB18]
Length = 306
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L++ RK +GL G P HM+F GNPGTGK
Sbjct: 33 LDQLDREL---IGLKPVKTRIREIAALLLIERLRKRMGLASG--NPTLHMSFTGNPGTGK 87
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 88 TTVALRIAAILHKLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 130
>gi|429207425|ref|ZP_19198684.1| putative RuBisCo-expression protein CbbX [Rhodobacter sp. AKP1]
gi|428189800|gb|EKX58353.1| putative RuBisCo-expression protein CbbX [Rhodobacter sp. AKP1]
Length = 327
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 32 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 85
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 86 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 141
>gi|410657251|ref|YP_006909622.1| Stage V sporulation protein whose disruption leads to the
production of immature spores (SpoVK) [Dehalobacter sp.
DCA]
gi|410660287|ref|YP_006912658.1| Stage V sporulation protein K [Dehalobacter sp. CF]
gi|409019606|gb|AFV01637.1| Stage V sporulation protein whose disruption leads to the
production of immature spores (SpoVK) [Dehalobacter sp.
DCA]
gi|409022643|gb|AFV04673.1| Stage V sporulation protein K [Dehalobacter sp. CF]
Length = 300
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTG 255
+E+ EL +++GL +K + + + + +RR+ L P H F GNPGTG
Sbjct: 38 EEIITELDSLIGLESVKKLIHELYAFVEICKRREKEKLNT----EPLVLHTVFSGNPGTG 93
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
KT VAR++GRL +G+LP + E +R DLVGE+VGHT KTR V L I
Sbjct: 94 KTTVARLIGRLFKEMGVLPKGHIIECERADLVGEYVGHTANKTRELVKKALGGI 147
>gi|295103843|emb|CBL01387.1| ATPases of the AAA+ class [Faecalibacterium prausnitzii SL3/3]
Length = 688
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++++ EL +VGL +K + A + + +RR A G K A HM F GNPGTGKT
Sbjct: 424 VEQIRAELDALVGLAPVKEYVFGLADNLQVQQRRAAAGFKT-ASLSMHMIFTGNPGTGKT 482
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+AR++ + L +G L ++ EV R DLVG + GHT P T
Sbjct: 483 TIARLVAKYLKAIGALGGGQLVEVTRADLVGRYTGHTAPLT 523
>gi|87302490|ref|ZP_01085307.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. WH
5701]
gi|87282834|gb|EAQ74791.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. WH
5701]
Length = 322
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 5/114 (4%)
Query: 188 LEACSETKAKMDELENEL-SNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-H 245
LEA E A + E+ N+L + ++GL +K ++R+ A ++++ RK +GL A P H
Sbjct: 28 LEAAYEA-ANVQEVLNQLDTELIGLRPVKTRIREIAALLVVERARKQVGLTTAA--PSLH 84
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M+F G PGTGKT VA + +L+ +G + + R DLVG+++GHT PKTR
Sbjct: 85 MSFTGRPGTGKTTVAERMSEILHRLGYVRKGHLVTATRDDLVGQYIGHTAPKTR 138
>gi|453049419|gb|EME97014.1| ATPase AAA [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 613
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL +VGL +K Q+R + + + R GL V +PP H F G GTGKT VAR
Sbjct: 336 ELERMVGLEPVKRQVRALSAQLHMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVAR 392
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
ILGR+ Y +G+L D + E QR DLVGEF+G T K + L +
Sbjct: 393 ILGRVFYALGLLGGDHLVEAQRADLVGEFLGQTAVKANELIDSALGGV 440
>gi|39934631|ref|NP_946907.1| cbbX protein [Rhodopseudomonas palustris CGA009]
gi|192290147|ref|YP_001990752.1| CbbX protein [Rhodopseudomonas palustris TIE-1]
gi|39648480|emb|CAE27002.1| cbbX protein homolog [Rhodopseudomonas palustris CGA009]
gi|192283896|gb|ACF00277.1| CbbX protein [Rhodopseudomonas palustris TIE-1]
Length = 308
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L++ RK +GL G P HM+F GNPGTGK
Sbjct: 33 LDQLDREL---IGLKPVKTRIREIAALLLVERLRKRMGLATG--NPTLHMSFTGNPGTGK 87
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 88 TTVALRIASILHKLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 130
>gi|350397200|ref|XP_003484803.1| PREDICTED: tankyrase-1-like [Bombus impatiens]
Length = 1208
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+LR NP +N R+ TPLH +AG+N+ +V+ LL ++
Sbjct: 497 SKSGDLAAVERILRTNPLAVNCRDLDGRHSTPLHFAAGFNRVPVVEYLLAH----GADVH 552
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + Y V+
Sbjct: 553 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG----KYEIVR 608
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD + K+ +G TPLD
Sbjct: 609 LLLRHGADATKKNRDGATPLD 629
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN ++ + LLE ++
Sbjct: 652 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNMDVAEFLLER----GADVN 705
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++
Sbjct: 706 AQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQ---LCA 761
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD +K+ EG+TPLD
Sbjct: 762 LLLAHGADPFSKNQEGQTPLD 782
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL + L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 31 KTGDLARVKALV--TPKTVNARDTAGRKSTPLHFAAGYGRIDVVEFLLSA----GASIQA 84
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 85 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 140
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 141 LLQHGADANIRNTEGKTALE 160
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 211 TPLHLAAGYNRSRLVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 266
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL AD + + K+ +D +
Sbjct: 267 AVNASDLWAFTPLHEAASKS-RVE---VCSLLLSEGADPTQLNCHSKSAIDVAP----TL 318
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIV 209
+L+E L + E + L+AC + A + +L+ LS V
Sbjct: 319 ELQERLTY---EYKGHCLLDACRQ--ADLTKLKKYLSQEV 353
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLH--VSAGYNK-A 61
Q+R + K + + DL ++ L + ++N ++P TPLH V++ Y K
Sbjct: 321 QERLTYEYKGHCLLDACRQADLTKLKKYLSQ--EVVNFKHPYTGDTPLHYAVASPYPKRK 378
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
++++SL+ L +N TPLH+A + +A +LL H A + A G T
Sbjct: 379 QVIESLIR----KNAALNEKNKDYLTPLHVATDHSHYDAMDVLLRHNAKVNALDGLGQTA 434
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
LH V R ++ + LL YN D S +G T
Sbjct: 435 LHRCV----REDNVQACRILLSYNVDPSIVSLQGYT 466
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA + A+ LL GA + A+ G+ PLH + Y D A + L++YN
Sbjct: 680 TPLHLAAGYNNMDVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 735
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH-----SEEQRKRRALE-ACSE 193
+A D G TPL H + G +L LLL H S+ Q + L+ AC++
Sbjct: 736 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGADPFSKNQEGQTPLDLACAD 787
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 58 TPLHFAAGYGRIDVVEFLLSAGASIQARDDGGLHPLHNACSFGHSD----VVRLLLEAGA 113
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +DN TPL H + G + LL H + R
Sbjct: 114 NPNTRDNWNYTPL-HEAAIKGKIDVCIALLQHGADANIR 151
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + +++V+ LLE N ++ + TPLH AA G + LL HGA
Sbjct: 92 PLHNACSFGHSDVVRLLLEAGANPNT----RDNWNYTPLHEAAIKGKIDVCIALLQHGAD 147
Query: 111 IEAKANNGMTPLHLS----------------VWYSIRSEDYATVKTLLE-YNADCSAKDN 153
+ G T L L+ + + RS + + LL N +C A D
Sbjct: 148 ANIRNTEGKTALELADPATKPVLTGEYKKDELLEAARSGNEERLLQLLNPLNVNCHASDG 207
Query: 154 EGKTPLDHLSNGPGSAKLRELLL 176
TPL HL+ G ++L ++LL
Sbjct: 208 RRSTPL-HLAAGYNRSRLVQILL 229
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 200 VNCHASDGRRSTPLHLAAGYNRSRLVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 255
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ LL++ A +A D TPL
Sbjct: 256 EVTEALLKHGAAVNASDLWAFTPL 279
>gi|77464857|ref|YP_354361.1| CbbX protein [Rhodobacter sphaeroides 2.4.1]
gi|77389275|gb|ABA80460.1| CbbX protein [Rhodobacter sphaeroides 2.4.1]
Length = 341
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 46 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 99
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 100 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 155
>gi|51210008|ref|YP_063672.1| CbbX [Gracilaria tenuistipitata var. liui]
gi|50657762|gb|AAT79747.1| cfxQ protein homolog [Gracilaria tenuistipitata var. liui]
Length = 306
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFL 249
++ + +DEL+ EL VGL +K ++++ A +L+D R LGL G+ P HM+F
Sbjct: 31 TQIQEVLDELQQEL---VGLQPVKTRIKEIAALLLVDRLRNNLGLVSGS---PGLHMSFT 84
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G+PGTGKT VA + +L +G + + V R DLVG+++GHT PKT+
Sbjct: 85 GSPGTGKTTVAMKMADILNRLGYIRRSNLMTVTRDDLVGQYIGHTAPKTK 134
>gi|78044056|ref|YP_360223.1| stage V sporulation protein K [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996171|gb|ABB15070.1| stage V sporulation protein K [Carboxydothermus hydrogenoformans
Z-2901]
Length = 296
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
++ L EL +VGL E+K + + + ++R LK HM F GNPGTGK
Sbjct: 24 QVSSLLKELDRMVGLIEVKEMVFEIYALAQIHKKRVQEKLKTN-NVSWHMVFKGNPGTGK 82
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VARI+G+L +GIL + EV+R DLVGE++GHT KTR ++
Sbjct: 83 TTVARIIGKLFKEIGILTKGHLIEVERADLVGEYIGHTALKTREQL 128
>gi|110347046|ref|YP_665864.1| AAA ATPase, central region [Chelativorans sp. BNC1]
gi|110283157|gb|ABG61217.1| AAA ATPase, central region [Chelativorans sp. BNC1]
Length = 390
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
++E+ EL + G H +K ++RK + ++ R+ G+ A PP H+ FLGNPGTG
Sbjct: 83 LEEILAELDAMTGWHSVKAEVRKLVAVLQAEQERRRYGI---ATTPPSLHLVFLGNPGTG 139
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT AR++G + +G+L + V EV R+ LV ++G T KTR+ +
Sbjct: 140 KTTAARLMGEMFRTLGLLKSGHVVEVDRSQLVAGYIGQTAIKTRKAI 186
>gi|356624522|pdb|3SYL|A Chain A, Crystal Structure Of The Aaa+ Protein Cbbx, Native
Structure
gi|356624523|pdb|3SYL|B Chain B, Crystal Structure Of The Aaa+ Protein Cbbx, Native
Structure
Length = 309
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 14 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 67
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 68 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|3913209|sp|P95648.1|CBBX_RHOSH RecName: Full=Protein CbbX
gi|1825470|gb|AAC44827.1| CbbX [Rhodobacter sphaeroides]
Length = 309
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 14 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 67
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 68 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|160942772|ref|ZP_02090013.1| hypothetical protein FAEPRAM212_00249 [Faecalibacterium prausnitzii
M21/2]
gi|158445937|gb|EDP22940.1| ATPase, AAA family [Faecalibacterium prausnitzii M21/2]
Length = 688
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++++ EL +VGL +K + A + + +RR A G K A HM F GNPGTGKT
Sbjct: 424 VEQIRAELDALVGLAPVKEYVFGLADNLQVQQRRAAAGFKT-ASLSMHMIFTGNPGTGKT 482
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+AR++ + L +G L ++ EV R DLVG + GHT P T
Sbjct: 483 TIARLVAKYLKAIGALGGGQLVEVTRADLVGRYTGHTAPLT 523
>gi|326437838|gb|EGD83408.1| hypothetical protein PTSG_04015 [Salpingoeca sp. ATCC 50818]
Length = 434
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPV-----MAQTPLHVSAGYNKAEIVKSLLEWP 71
+H Q GD+ + LL++ L + PV MA+TPLHV+ Y + E V+ LL+
Sbjct: 4 LHTACQRGDIDKVRALLKK--GLFSGPKPVDCRDSMARTPLHVACQYGQVEAVEELLQ-- 59
Query: 72 GNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIR 131
+ A+N+ TPLH+A+++G A+LLL HGA ++ N G T LH++ +
Sbjct: 60 --HGASVHAKNVMANTPLHIASQHGQGVIARLLLQHGASVDEANNEGNTALHIAGFCGQD 117
Query: 132 SEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ + L+E A AK+ EG+TPL HL++ + +LL H
Sbjct: 118 T----IAELLIENGATTHAKNKEGRTPL-HLASFRNHVAVVRVLLKH 159
>gi|194292438|ref|YP_002008345.1| protein CbbX [Cupriavidus taiwanensis LMG 19424]
gi|193226342|emb|CAQ72291.1| Protein cbbX of unknown function (RUBISCO operon); AAA ATPase
domain [Cupriavidus taiwanensis LMG 19424]
Length = 292
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTM 258
+L+ EL +GL +K ++R A +L+D+ R A G GA P HM F GNPGTGKT
Sbjct: 20 QLDREL---IGLKPVKARIRDIAALLLVDKLRAARGFSAGA--PSLHMCFTGNPGTGKTT 74
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + ++L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 75 VAMRMAQILHQLGYVRRGHLVAVTRDDLVGQYIGHTAPKTK 115
>gi|407981840|ref|ZP_11162530.1| type VII secretion AAA-ATPase EccA [Mycobacterium hassiacum DSM
44199]
gi|407376592|gb|EKF25518.1| type VII secretion AAA-ATPase EccA [Mycobacterium hassiacum DSM
44199]
Length = 588
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E E EL+ +GL E+K Q+ + + + +R+ GL V A+R H+ F G PGTGKT
Sbjct: 294 LTEAEAELAEFIGLEEVKYQVARLKSSVAMAIKRQERGLAV-AQRTNHLVFAGPPGTGKT 352
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
+AR++ ++ +GIL + V EV R DLVG+ +G T KT + L + L
Sbjct: 353 TIARVVAKIYCGLGILRKETVREVHRADLVGQHIGETEAKTNAVIDSALDGVLFL 407
>gi|300767723|ref|ZP_07077633.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|448820476|ref|YP_007413638.1| Hypothetical protein zj316_0953 [Lactobacillus plantarum ZJ316]
gi|300494708|gb|EFK29866.1| conserved hypothetical protein [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|448273973|gb|AGE38492.1| Hypothetical protein zj316_0953 [Lactobacillus plantarum ZJ316]
Length = 643
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+ L+ ++G+ +K ++ ++ ++++RK G+ A H FLGNPGTGKT VARI
Sbjct: 387 DRLNEMIGISGVKSEINEFIAIAQMNKQRKEQGISSDAM-TLHSLFLGNPGTGKTTVARI 445
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
LG +L+ GI+ + EV R+D+VG ++G T KTR+
Sbjct: 446 LGEILFDKGIINDQKFVEVSRSDIVGRYIGETAIKTRK 483
>gi|116144|sp|P23013.1|CFXQ_XANFL RecName: Full=Protein CfxQ
gi|48546|emb|CAA35117.1| cfxQ [Xanthobacter flavus]
Length = 317
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 69/108 (63%), Gaps = 4/108 (3%)
Query: 194 TKAKMDELENELSN-IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGN 251
T++++ E EL ++GL +K ++R+ A +++ R+ LGL GA P HMAF GN
Sbjct: 29 TESEVPEFLAELDEGLIGLKPVKRRIREIAAHLVIGRAREKLGLTSGA--PTLHMAFTGN 86
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + ++L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 87 PGTGKTTVALKMAQILHRLGYVRRGHLVSVTRDDLVGQYIGHTAPKTK 134
>gi|383819059|ref|ZP_09974338.1| type VII secretion AAA-ATPase EccA [Mycobacterium phlei RIVM601174]
gi|383337855|gb|EID16230.1| type VII secretion AAA-ATPase EccA [Mycobacterium phlei RIVM601174]
Length = 535
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A R H+ F G PGTGKT +
Sbjct: 239 EAEAELAEFIGLEEVKYQVARLKSSVAMALRRQERGLAV-ATRTNHLVFAGPPGTGKTTI 297
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +GIL + V EV R DL+G+ +G T KT + L + L
Sbjct: 298 ARVVAKIYCGLGILKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 350
>gi|295696253|ref|YP_003589491.1| AAA ATPase [Kyrpidia tusciae DSM 2912]
gi|295411855|gb|ADG06347.1| AAA ATPase central domain protein [Kyrpidia tusciae DSM 2912]
Length = 349
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGK 256
E+ EL+ VGL LK L++ + RR+ LK P HM F GNPGTGK
Sbjct: 77 EMVEELNQFVGLQRLKDVLQEAFAFAEIQSRRQECRLKA----VPVVWHMIFRGNPGTGK 132
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
T +AR + + L+ GIL ++ EV+R DLVGE++GHT KTR ++ L +
Sbjct: 133 TTMARFVAKWLHRFGILSKGQLIEVERADLVGEYIGHTAQKTREQIQRALGGV 185
>gi|28373666|pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
gi|28274848|gb|AAO25689.1| ankyrin repeat protein E3_5 [synthetic construct]
Length = 166
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A EIV+ LL+ + ++ A ++ G TPLH
Sbjct: 31 RILMANGADVNATDN-DGYTPLHLAASNGHLEIVEVLLK----NGADVNASDLTGITPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL HGA + A N+G TPLHL+ Y V+ LL++ AD +A
Sbjct: 86 LAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYG----HLEIVEVLLKHGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + G TPLH+AA NG E ++LL +GA + A G+TPLHL+ +
Sbjct: 39 DVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAA----TGHLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
V+ LL++ AD +A DN+G TPL HL+ G ++ E+LL H +
Sbjct: 95 IVEVLLKHGADVNAYDNDGHTPL-HLAAKYGHLEIVEVLLKHGAD 138
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A N+G TPLHL+ + V+ LL+ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDNDGYTPLHLAA----SNGHLEIVEVLLKNGADVNAS 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL H +
Sbjct: 77 DLTGITPL-HLAAATGHLEIVEVLLKHGAD 105
>gi|221640778|ref|YP_002527040.1| protein cbbX [Rhodobacter sphaeroides KD131]
gi|221161559|gb|ACM02539.1| Protein cbbX [Rhodobacter sphaeroides KD131]
Length = 309
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 14 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 67
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 68 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|91978183|ref|YP_570842.1| AAA ATPase, central region [Rhodopseudomonas palustris BisB5]
gi|91684639|gb|ABE40941.1| AAA ATPase, central region [Rhodopseudomonas palustris BisB5]
Length = 307
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D+L+ EL +GL +K ++R+ A +L++ RK +GL G P HM+F GNPGTGK
Sbjct: 30 LDQLDREL---IGLKPVKTRIREIAALLLVERLRKRMGLATG--NPTLHMSFTGNPGTGK 84
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 85 TTVALRIASILHRLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 127
>gi|291450248|ref|ZP_06589638.1| CbxX/CfqX family protein [Streptomyces albus J1074]
gi|359143788|ref|ZP_09178003.1| ATPase [Streptomyces sp. S4]
gi|421740084|ref|ZP_16178361.1| AAA+ family ATPase [Streptomyces sp. SM8]
gi|291353197|gb|EFE80099.1| CbxX/CfqX family protein [Streptomyces albus J1074]
gi|406691513|gb|EKC95257.1| AAA+ family ATPase [Streptomyces sp. SM8]
Length = 622
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 5/113 (4%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--H 245
L S +++ EL +VGL +K Q++ + + + R GL V RPP H
Sbjct: 325 LPTGSADPVALEQALAELERMVGLEPVKRQVKALSAQLNMARLRAGQGLPV---RPPKRH 381
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
F G GTGKT VARILGR+ Y +G+L D + E QR+DLVGE++G T K
Sbjct: 382 FVFSGPSGTGKTTVARILGRVFYALGLLGGDHLVEAQRSDLVGEYLGQTAVKA 434
>gi|408676403|ref|YP_006876230.1| putative sporulation protein K [Streptomyces venezuelae ATCC 10712]
gi|328880732|emb|CCA53971.1| putative sporulation protein K [Streptomyces venezuelae ATCC 10712]
Length = 801
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ ++ D L EL +VGL +K+++R + + RR+ GLK + R H+ F GNP
Sbjct: 531 DARSSQDVL-GELDALVGLESVKLEVRTLTNMIEVGRRRQEAGLKAASVRR-HLVFTGNP 588
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 589 GTGKTTVARLYGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 635
>gi|284029815|ref|YP_003379746.1| AAA ATPase central domain-containing protein [Kribbella flavida DSM
17836]
gi|283809108|gb|ADB30947.1| AAA ATPase central domain protein [Kribbella flavida DSM 17836]
Length = 727
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL +K +R+ + ++RRK GL R HM F+G PGT KT +AR+L
Sbjct: 451 ELDALIGLESVKEAVRRMVAEIRTNQRRKDFGLPT-QDRARHMVFVGKPGTAKTTIARLL 509
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGP----KTRRRVGHLLSEITCLTFI 315
GR+ + +G+L V EV R+DLVG VG T P K R +G +L T +
Sbjct: 510 GRIYHQLGVLEKGHVVEVDRSDLVGPSVGTTAPLTAAKFREALGGVLFVDEAYTLV 565
>gi|239635871|ref|ZP_04676894.1| ATPase of the AAA+ class [Staphylococcus warneri L37603]
gi|239598495|gb|EEQ80969.1| ATPase of the AAA+ class [Staphylococcus warneri L37603]
Length = 646
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
Query: 179 SEEQRKRRALEACSETKAKMDELEN----ELSNIVGLHELKIQLRKWAKGMLLDERRKAL 234
+E+ +K E+ +ET+ ++E E+ +L+N++GL K Q + + +++E +K
Sbjct: 364 TEKPKKIVIKESSNETEKSVEEKESNPIEKLNNLIGLSNAKKQAKDFINVHVVNEIKKKK 423
Query: 235 GLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
G++VG H + GNPGTGKT VAR++ ++L ++ D + EV R DLV FVG T
Sbjct: 424 GIRVG-DNSLHSVYKGNPGTGKTTVARLIAQILSQEKVIKKDLLVEVTRQDLVAGFVGQT 482
Query: 295 GPKTRR 300
KT +
Sbjct: 483 AIKTEK 488
>gi|410697685|gb|AFV76753.1| AAA+ family ATPase [Thermus oshimai JL-2]
Length = 292
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
Query: 182 QRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGAR 241
+ K AL E +A ++ L+ EL VGL +K ++R+ A + +D+ R+ L L V R
Sbjct: 3 EEKALALVKNPEVEAVLEALDKEL---VGLAPVKRRIREIAAYLSVDKLRRELNL-VADR 58
Query: 242 RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HMAF+G PGTGKT VA + +L+ +G + D + R DLVG+++GHT PKT+
Sbjct: 59 PTLHMAFVGPPGTGKTTVAMRMATILHRLGYIRRDHLVVASRDDLVGQYIGHTAPKTK 116
>gi|386354431|ref|YP_006052677.1| AAA ATPase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365804939|gb|AEW93155.1| AAA ATPase central domain protein [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 828
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
DE+ EL +VGL +K ++R + + RR GLK + R H+ F G+PGTGKT
Sbjct: 563 DEVLGELDALVGLDGVKREVRALIDLITVGRRRTEAGLKAPSLRR-HLVFTGSPGTGKTT 621
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGH 304
VAR+ G +L +G+L T + EV R DLVGE +G T +T+ H
Sbjct: 622 VARLYGEILAALGVLRTGHLVEVSRVDLVGEHIGSTAIRTQEAFEH 667
>gi|357399914|ref|YP_004911839.1| sporulation protein K (Stage V; partial match). Contains an ATPase
domain, partial [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|386355955|ref|YP_006054201.1| sporulation protein K [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766323|emb|CCB75034.1| putative sporulation protein K (Stage V; partial match). Contains
an ATPase domain [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365806463|gb|AEW94679.1| sporulation protein K [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 880
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP----HMAFLGNPG 253
+D L EL +VGL +K + M L RR GL PP H+ F GN G
Sbjct: 611 LDNLLAELDALVGLARVKQDVGTLVTLMRLVRRRTEAGLP-----PPPLSRHLVFAGNSG 665
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRRVGHLL 306
TGKT VAR+ GR+L +G+L + + E R LVGE+VGHT PKT RR +G +L
Sbjct: 666 TGKTTVARLYGRILAALGLLSSGHLVETDRGALVGEYVGHTAPKTTAVFRRALGGVL 722
>gi|126463699|ref|YP_001044813.1| ATPase central domain-containing protein [Rhodobacter sphaeroides
ATCC 17029]
gi|126105363|gb|ABN78041.1| AAA ATPase, central domain protein [Rhodobacter sphaeroides ATCC
17029]
Length = 309
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 14 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 67
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 68 LHMSFTGNPGTGKTTVALKMSGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|444431543|ref|ZP_21226708.1| hypothetical protein GS4_15_00790 [Gordonia soli NBRC 108243]
gi|443887649|dbj|GAC68429.1| hypothetical protein GS4_15_00790 [Gordonia soli NBRC 108243]
Length = 611
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 178 HSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
S + R A+++ E ++E + EL +GL +K Q+ K LL + R GL
Sbjct: 299 QSGQMLTREAIDSPVERNELVEEAQRELQAQIGLDSVKEQVAKLQSAALLAKVRADKGLS 358
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
AR H+AF G PGTGKT VARI+ ++ +G + +D+V E R D VGE +G T K
Sbjct: 359 TSAR-SLHLAFTGPPGTGKTTVARIIAKIYCGLGFISSDKVVEATRRDFVGEHLGSTAIK 417
Query: 298 T 298
T
Sbjct: 418 T 418
>gi|357398394|ref|YP_004910319.1| sporulation protein K-like protein [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|337764803|emb|CCB73512.1| putative sporulation protein K-like protein [Streptomyces cattleya
NRRL 8057 = DSM 46488]
Length = 832
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
DE+ EL +VGL +K ++R + + RR GLK + R H+ F G+PGTGKT
Sbjct: 567 DEVLGELDALVGLDGVKREVRALIDLITVGRRRTEAGLKAPSLRR-HLVFTGSPGTGKTT 625
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGH 304
VAR+ G +L +G+L T + EV R DLVGE +G T +T+ H
Sbjct: 626 VARLYGEILAALGVLRTGHLVEVSRVDLVGEHIGSTAIRTQEAFEH 671
>gi|120401436|ref|YP_951265.1| ATPase central domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954254|gb|ABM11259.1| AAA ATPase, central domain protein [Mycobacterium vanbaalenii
PYR-1]
Length = 615
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL+ +GL E+K Q+ + + + RR+ GL V A+R H+ F G PGTGKT +
Sbjct: 317 EAEAELAEFIGLDEVKYQVARLKSSVAMAIRRQERGLTV-AQRTNHLVFAGPPGTGKTTI 375
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 376 ARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 428
>gi|325093697|gb|EGC47007.1| ankyrin repeat protein [Ajellomyces capsulatus H88]
Length = 1183
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 18/139 (12%)
Query: 27 LAFQRLLRENPSLLNERNPVM------AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
L ++++++ LL ERN + A+TPL +A Y + ++VK LLE N +E
Sbjct: 990 LGYKQIVK----LLLERNANIETKDQYAETPLSHAAFYGRKQVVKLLLERNAN----IET 1041
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ Y +TPL AA +G + KLLL A IE K +G TPL + +Y + TVK
Sbjct: 1042 KDQYAQTPLSQAACSGRKQVVKLLLKRNANIEVKDEDGQTPLSWAAFYGHKQ----TVKL 1097
Query: 141 LLEYNADCSAKDNEGKTPL 159
LLE NA+ KD +G+TPL
Sbjct: 1098 LLERNANIEIKDKDGRTPL 1116
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL+ N ++ E QTPL +A ++VK LLE N +EA+++ G+TPL
Sbjct: 867 LLKGNANI--ETKDQFEQTPLLWAAILGFEQVVKLLLERNAN----IEAKSVNGKTPLSY 920
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G + KLLL A IEAK+ NG TPL Y+ + VK LLE NA+ K
Sbjct: 921 AARLGYKQIVKLLLERNANIEAKSVNGKTPLS----YAAENGHEQIVKLLLERNANIEIK 976
Query: 152 DNEGKTPL 159
D TPL
Sbjct: 977 DEHEYTPL 984
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL N ++ E V +TPL +A +IVK LLE N +E++ ++ Y TPL
Sbjct: 933 LLERNANI--EAKSVNGKTPLSYAAENGHEQIVKLLLE--RNANIEIKDEHEY--TPLSS 986
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G + KLLL A IE K TPL + +Y + VK LLE NA+ K
Sbjct: 987 AARLGYKQIVKLLLERNANIETKDQYAETPLSHAAFYGRKQ----VVKLLLERNANIETK 1042
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D +TPL + G ++ +LLL
Sbjct: 1043 DQYAQTPLSQAACS-GRKQVVKLLL 1066
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A SG + LL+ N ++ E QTPL +A Y + VK LLE N +E
Sbjct: 1054 ACSGRKQVVKLLLKRNANI--EVKDEDGQTPLSWAAFYGHKQTVKLLLERNAN----IEI 1107
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVW 127
++ G TPL AA+ G + KLLL A IE K NG TPL + +
Sbjct: 1108 KDKDGRTPLSWAAEKGHGQVVKLLLERNANIEVKDKNGQTPLSWAAY 1154
>gi|242620088|ref|YP_003002092.1| putative rubisco expression protein [Aureococcus anophagefferens]
gi|239997333|gb|ACS36856.1| putative rubisco expression protein [Aureococcus anophagefferens]
Length = 290
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
SE ++ +D L+ EL +GL +K ++R+ + +L+D R+ LGL G+ HM+F G+
Sbjct: 14 SEIQSILDILDEEL---IGLKPVKTRIREISALLLIDRLRQQLGL-TGSNPGLHMSFTGS 69
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + +LY + + V R DLVG+++GHT PKT+
Sbjct: 70 PGTGKTTVALKMADILYKLDYSRKGHLMTVTRDDLVGQYIGHTAPKTK 117
>gi|356624721|pdb|3ZUH|A Chain A, Negative Stain Em Map Of The Aaa Protein Cbbx, A Red-Type
Rubisco Activase From R. Sphaeroides
gi|356624722|pdb|3ZUH|B Chain B, Negative Stain Em Map Of The Aaa Protein Cbbx, A Red-Type
Rubisco Activase From R. Sphaeroides
gi|356624723|pdb|3ZUH|C Chain C, Negative Stain Em Map Of The Aaa Protein Cbbx, A Red-Type
Rubisco Activase From R. Sphaeroides
gi|356624724|pdb|3ZUH|D Chain D, Negative Stain Em Map Of The Aaa Protein Cbbx, A Red-Type
Rubisco Activase From R. Sphaeroides
gi|356624725|pdb|3ZUH|E Chain E, Negative Stain Em Map Of The Aaa Protein Cbbx, A Red-Type
Rubisco Activase From R. Sphaeroides
gi|356624726|pdb|3ZUH|F Chain F, Negative Stain Em Map Of The Aaa Protein Cbbx, A Red-Type
Rubisco Activase From R. Sphaeroides
Length = 289
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 7 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 60
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 61 LHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 116
>gi|418049233|ref|ZP_12687320.1| AAA ATPase central domain protein [Mycobacterium rhodesiae JS60]
gi|353190138|gb|EHB55648.1| AAA ATPase central domain protein [Mycobacterium rhodesiae JS60]
Length = 609
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
EA A ++E E EL +GL E+K Q+ + + + RR+ GL V A+R H+ F
Sbjct: 304 EARERKAALLEEAERELGEFIGLDEVKDQVSRLKSSVAMALRREERGLAV-AQRTHHLVF 362
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
G PGTGKT +AR++ ++ +G+L + V EV R D++G+ +G T KT
Sbjct: 363 AGPPGTGKTTIARVVAKIYCGLGLLKRENVREVHRADMIGQHIGETEAKT 412
>gi|225427500|ref|XP_002263861.1| PREDICTED: tankyrase-1 isoform 1 [Vitis vinifera]
Length = 282
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 13/169 (7%)
Query: 8 RSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSL 67
+ R+++ IH A+SGDLL Q + NP +N R+ ++TPLH++A + ++V L
Sbjct: 3 KERNSEIEDIHNAARSGDLLKLQSICSSNPLAVNSRDK-HSRTPLHLAAWAGQTQVVTYL 61
Query: 68 LEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVW 127
+ K ++ A M +H AA+ G E + LL+ GA ++A GMTPLH
Sbjct: 62 CKH----KADVGAAAMDDMGAIHFAAQKGHLEVVRTLLSSGASVKAITRKGMTPLH---- 113
Query: 128 YSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
Y+ + K L+ SAK GKTPLD GS + R +L+
Sbjct: 114 YAAQGSHLDLAKYLVRKGGSLSAKSKAGKTPLDL----AGSEEFRTVLV 158
>gi|146278743|ref|YP_001168902.1| ATPase central domain-containing protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145556984|gb|ABP71597.1| AAA ATPase, central domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 309
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFL 249
S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P HM+F
Sbjct: 20 SGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPTLHMSFT 73
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 74 GNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|384569036|gb|AFI09263.1| LmrCD-specific DARPin, partial [synthetic construct]
Length = 169
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N N V TPLH++A + EIV LL+ + ++ A + +G TP+H
Sbjct: 31 RILMANGADVN-ANDVWGYTPLHLAANFGHLEIVDVLLK----NGADVNAVDSFGFTPMH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL +GA + K N+G TPLHL+ V+ LL++ AD +A
Sbjct: 86 LAAYEGHLEIVEVLLKNGADVNVKDNDGKTPLHLAASRG----HLEIVEVLLKHGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 30/119 (25%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY-----------------SIRSED 134
AA+ G ++ ++L+A+GA + A G TPLHL+ + ++ S
Sbjct: 21 AARAGQDDEVRILMANGADVNANDVWGYTPLHLAANFGHLEIVDVLLKNGADVNAVDSFG 80
Query: 135 YA------------TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ V+ LL+ AD + KDN+GKTPL HL+ G ++ E+LL H +
Sbjct: 81 FTPMHLAAYEGHLEIVEVLLKNGADVNVKDNDGKTPL-HLAASRGHLEIVEVLLKHGAD 138
>gi|224074506|ref|XP_002304382.1| predicted protein [Populus trichocarpa]
gi|222841814|gb|EEE79361.1| predicted protein [Populus trichocarpa]
Length = 249
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+SGD+ A + ++ NP +N R+ ++TPLH++A +AE+V L + K
Sbjct: 16 LHAAARSGDMKAVESIVSSNPLAINSRDK-HSRTPLHLAAWSGQAEVVSYLCKH----KA 70
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A M +H AA+ G +E + LL+ GA I+A G+TPLH Y+++
Sbjct: 71 DVGAAAMDDMGAIHFAAQKGHSEVVRTLLSSGASIKASTRKGLTPLH----YAVQGSHLE 126
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSN 164
VK L+ A + + G TPLD +N
Sbjct: 127 LVKYLVRKGASLNVRTKAGMTPLDLATN 154
>gi|123501942|ref|XP_001328182.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911122|gb|EAY15959.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 881
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++ ++ + + LL + ++ NE++ +TPLH++A N +E+++ LL+ N
Sbjct: 689 LHIAAKNNNVASAEDLLSKGFNV-NEKDHESGKTPLHIAAENNSSEVIEILLDIGAN--- 744
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ A++ TPLH AA+N A ++L++HGA I AK NG +PLH + +I +
Sbjct: 745 -INAKDNSERTPLHYAAQNNKKAAVEILISHGANINAKDKNGYSPLHYA---AINRQGKE 800
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDH 161
V+ L+ A ++KD +G TPL H
Sbjct: 801 MVEFLISNGARINSKDKDGYTPLHH 825
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N K L+ + + N YG TPLH A +N N+A +L +GA
Sbjct: 35 TALHIAAWNNSKSTCKILITHGADLNIR---DNEYGRTPLHYAVENNSNDALDILAGYGA 91
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I +K G T H Y++ + + ++TL+ Y AD +A+D EGKTPL H S
Sbjct: 92 DINSKDFEGKTAFH----YAVENNNLELIETLINYWADINAQDKEGKTPL-HYSEKNNLK 146
Query: 170 KLRELLL 176
+ + L+
Sbjct: 147 TITDFLI 153
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 49 QTP----LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLL 104
QTP LH++A N + LL N E + G+TPLH+AA+N +E ++L
Sbjct: 682 QTPQTNALHIAAKNNNVASAEDLLSKGFNVN---EKDHESGKTPLHIAAENNSSEVIEIL 738
Query: 105 LAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
L GA I AK N+ TPLH Y+ ++ A V+ L+ + A+ +AKD G +PL + +
Sbjct: 739 LDIGANINAKDNSERTPLH----YAAQNNKKAAVEILISHGANINAKDKNGYSPLHYAAI 794
Query: 165 GPGSAKLRELLL 176
++ E L+
Sbjct: 795 NRQGKEMVEFLI 806
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T H + N E++++L+ + ++ AQ+ G+TPLH + KN L+ +G
Sbjct: 101 KTAFHYAVENNNLELIETLINYWA----DINAQDKEGKTPLHYSEKNNLKTITDFLIMNG 156
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I +K ++G+T LH ++I ++ ++ L+ AD + KDN G T L H + S
Sbjct: 157 ADINSKDDDGLTILH----HAILDKNLVILEDLIINGADLNVKDNNGFTALHHAALNRYS 212
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 213 KETLELLISH 222
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH A +N C +A + L+ + I K N G+T LH++ W + +S T K L+ + A
Sbjct: 2 TPLHSAEENHCEDAVQTLVINDIEINLKDNEGITALHIAAWNNSKS----TCKILITHGA 57
Query: 147 DCSAKDNE-GKTPL 159
D + +DNE G+TPL
Sbjct: 58 DLNIRDNEYGRTPL 71
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 76 VELEAQNMYGETPLHMAAKN-GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
+L ++ G T LH AA N E +LL++HGA + A NN +PLH++ W + D
Sbjct: 190 ADLNVKDNNGFTALHHAALNRYSKETLELLISHGASVNAIDNNEQSPLHIAAW----NND 245
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDH 161
++ +L + A +AKDN G+T L H
Sbjct: 246 IEFLEVMLSHGAFINAKDNSGETILHH 272
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A + D+ F ++ + + +N ++ +T LH +A N + +++L+ N V
Sbjct: 237 LHIAAWNNDI-EFLEVMLSHGAFINAKDN-SGETILHHAAWKNSIDFLETLILKGVN--V 292
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
L+ QN G+T LH A E A++L+ +GA + ++ N TPLH + +Y+ R E
Sbjct: 293 NLKDQN--GQTALHQAVYYNNLEVAQILVENGAVVNSQYENKWTPLHYAAYYN-RKE--- 346
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+ L+ A+ AK N GKTPL + + S L+ L+
Sbjct: 347 IAELLISSGAEILAKSNSGKTPLQYATLRNNSDVLKVLI 385
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 86 ETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN 145
++PLH+AA N E +++L+HGAFI AK N+G T LH + W + S D+ ++TL+
Sbjct: 234 QSPLHIAAWNNDIEFLEVMLSHGAFINAKDNSGETILHHAAWKN--SIDF--LETLILKG 289
Query: 146 ADCSAKDNEGKTPL 159
+ + KD G+T L
Sbjct: 290 VNVNLKDQNGQTAL 303
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
LN R+ +TPLH + N + + L + ++ +++ G+T H A +N E
Sbjct: 59 LNIRDNEYGRTPLHYAVENNSNDALDILAGYGA----DINSKDFEGKTAFHYAVENNNLE 114
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ L+ + A I A+ G TPLH YS ++ L+ AD ++KD++G T L
Sbjct: 115 LIETLINYWADINAQDKEGKTPLH----YSEKNNLKTITDFLIMNGADINSKDDDGLTIL 170
Query: 160 DH 161
H
Sbjct: 171 HH 172
>gi|11467528|ref|NP_043674.1| hypothetical protein OdsiCp095 [Odontella sinensis]
gi|1705764|sp|P49826.1|CFXQ_ODOSI RecName: Full=Protein cfxQ homolog
gi|1185223|emb|CAA91706.1| cfxQ [Odontella sinensis]
Length = 291
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 7/106 (6%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPG 253
AK+ L NE +VGL +K ++R+ A +L+D+ RK LG+ G+ P HM+F G+PG
Sbjct: 20 AKILNLLNE--ELVGLVPVKSRIREIAALLLIDKLRKNLGITAGS---PGLHMSFTGSPG 74
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
TGKT V + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 75 TGKTTVGLKMSDILFQLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 120
>gi|386388090|ref|ZP_10073015.1| hypothetical protein STSU_31710, partial [Streptomyces tsukubaensis
NRRL18488]
gi|385664452|gb|EIF88270.1| hypothetical protein STSU_31710, partial [Streptomyces tsukubaensis
NRRL18488]
Length = 295
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
DE+ EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 30 DEVLGELDALVGLESVKREVRSLINMIEVGRRRREAGLKAASVRR-HLVFTGSPGTGKTT 88
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 89 VARLYGEILAALGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 129
>gi|154417199|ref|XP_001581620.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121915849|gb|EAY20634.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 632
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +T L+ +A YN E + L+ N + +N YG+T LH
Sbjct: 222 ELLISHGANINEKDE-DGRTSLYNAAKYNGKETAELLISHGAN----INEKNKYGKTALH 276
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+N E A+LL++HGA I K NNG T LH +V Y + T + L+ + A+ +
Sbjct: 277 IAAENNIKETAELLISHGANINEKDNNGKTALHYAVEYKSKE----TAELLISHGANINE 332
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN GKT L H + S + ELL+ H
Sbjct: 333 KDNNGKTAL-HYAVEYKSKETAELLISH 359
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 94/177 (53%), Gaps = 17/177 (9%)
Query: 2 QKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKA 61
+K++D R+ A +G + LL + + +NE++ +T LH +A Y++
Sbjct: 431 EKDEDGRTSLYNAAKYNGKETA-------ELLISHGANINEKDN-NGKTALHYAAWYHRK 482
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
EI + L+ N + +N YG+T LH+AA+N E A+LL++HGA I K +G T
Sbjct: 483 EIAEVLISHGAN----INEKNKYGKTALHIAAENNIKETAELLISHGANINEKDEDGRTS 538
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
L+ + Y+ + T + L+ + A+ + KDN GKT L H + ++ E+L+ H
Sbjct: 539 LYNAAKYNGKE----TAEVLISHGANINEKDNNGKTAL-HYAAWYHRKEIAEVLISH 590
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N +T LH++A N E + L+ N + ++ G T L+ AAK E
Sbjct: 495 INEKNK-YGKTALHIAAENNIKETAELLISHGAN----INEKDEDGRTSLYNAAKYNGKE 549
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++L++HGA I K NNG T LH + WY R E + L+ + A+ + KDN GKT L
Sbjct: 550 TAEVLISHGANINEKDNNGKTALHYAAWYH-RKE---IAEVLISHGANINEKDNNGKTAL 605
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N +T LH++A N E + L+ N + ++ G T L+ AAK E
Sbjct: 396 INEKNK-YGKTALHIAAENNIKETAELLISHGAN----INEKDEDGRTSLYNAAKYNGKE 450
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HGA I K NNG T LH + WY R E + L+ + A+ + K+ GKT L
Sbjct: 451 TAELLISHGANINEKDNNGKTALHYAAWYH-RKE---IAEVLISHGANINEKNKYGKTAL 506
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ + ELL+ H
Sbjct: 507 -HIAAENNIKETAELLISH 524
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 9/117 (7%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ SLLE+ + + ++ + T LH A + E A+LL++HGA I K NNG T LH
Sbjct: 151 ISSLLEYFLSHGANINRKDNFRRTALHYAVEYKSKETAELLISHGANINEKDNNGKTALH 210
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS--NGPGSAKLRELLLWH 178
+V Y + T + L+ + A+ + KD +G+T L + + NG +A ELL+ H
Sbjct: 211 YAVEYKSKE----TAELLISHGANINEKDEDGRTSLYNAAKYNGKETA---ELLISH 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 78/150 (52%), Gaps = 14/150 (9%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +T LH + Y E + L+ N + ++ G TPLH
Sbjct: 321 ELLISHGANINEKDN-NGKTALHYAVEYKSKETAELLISHGAN----INEKDEDGCTPLH 375
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA E A++L++HGA I K G T LH++ +I+ T + L+ + A+ +
Sbjct: 376 IAAIENSKETAEVLISHGANINEKNKYGKTALHIAAENNIKE----TAELLISHGANINE 431
Query: 151 KDNEGKTPLDHLS--NGPGSAKLRELLLWH 178
KD +G+T L + + NG +A ELL+ H
Sbjct: 432 KDEDGRTSLYNAAKYNGKETA---ELLISH 458
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N + +++ K A +H A++ ++ LL + + +NE++ +T L+ +A YN E
Sbjct: 494 NINEKNKYGKTA-LHIAAEN-NIKETAELLISHGANINEKDE-DGRTSLYNAAKYNGKET 550
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ N + ++ G+T LH AA E A++L++HGA I K NNG T LH
Sbjct: 551 AEVLISHGAN----INEKDNNGKTALHYAAWYHRKEIAEVLISHGANINEKDNNGKTALH 606
Query: 124 LSVWYSIRSE 133
++ Y I+ +
Sbjct: 607 IAKSYKIKKQ 616
>gi|374602206|ref|ZP_09675200.1| ATPase AAA [Paenibacillus dendritiformis C454]
gi|374392075|gb|EHQ63403.1| ATPase AAA [Paenibacillus dendritiformis C454]
Length = 335
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
++ EL +VGL +K + + ++ RR+ GL HM F GNPGTGKT V
Sbjct: 66 DIRKELDRLVGLEHMKEIAFELYAILQMNRRRQEAGLTCQPH-VYHMVFKGNPGTGKTTV 124
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
ARI+ ++ +G+L + EV+R DLVGE++GHT KTR
Sbjct: 125 ARIMAKMFQQLGLLSKGHLLEVERADLVGEYIGHTAQKTR 164
>gi|259047933|ref|ZP_05738334.1| stage V sporulation protein K [Granulicatella adiacens ATCC 49175]
gi|259035430|gb|EEW36685.1| stage V sporulation protein K [Granulicatella adiacens ATCC 49175]
Length = 632
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L ++GL LK +++++ +++ RK G H FLGNPGTGKT VAR++G
Sbjct: 378 LEEMIGLENLKSEVKEFIAISKMNKIRKEKGFATSGFNL-HSLFLGNPGTGKTTVARLMG 436
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
+LL+ GI+ + + E R++LVG+++GHT KT+
Sbjct: 437 QLLHENGIIASSKYVETSRSNLVGQYIGHTAQKTKE 472
>gi|456062037|ref|YP_007476282.1| Rubisco expression protein (chloroplast) [Pavlova lutheri]
gi|449327224|gb|AGE93780.1| Rubisco expression protein (chloroplast) [Pavlova lutheri]
Length = 288
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFL 249
++ ++ +D+LE+EL VGL +K ++++ A +L+ RK LGL + P HM+F
Sbjct: 13 TQIQSLLDQLESEL---VGLRPVKQRIKEIAALLLVHRLRKNLGLTSSS---PGLHMSFT 66
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G+PGTGKT VA + +LY + + ++ V R DLVG+++GHT PKT++
Sbjct: 67 GSPGTGKTTVAEKMADILYRLNYINKAQLLTVTRDDLVGQYIGHTAPKTKQ 117
>gi|359421943|ref|ZP_09213846.1| hypothetical protein GOARA_091_00330 [Gordonia araii NBRC 100433]
gi|358242159|dbj|GAB11915.1| hypothetical protein GOARA_091_00330 [Gordonia araii NBRC 100433]
Length = 589
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E + EL++ +GL +K+Q+ K L + R GL AR H+ F G PGTGKT
Sbjct: 295 LEEAQRELADQIGLDSVKVQVDKLKSAATLAKVRVDKGLSSAAR-SQHLVFTGPPGTGKT 353
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ARI+ ++ +GIL +D V E R D VGE +G T KT + + L +
Sbjct: 354 TIARIVAKIYCALGILKSDTVIEATRRDFVGEHLGSTAIKTGKLIDQALDGV 405
>gi|170086888|ref|XP_001874667.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649867|gb|EDR14108.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 2272
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
+IVG ++ +L ++ + ++ KA G+ + P + F+G PGTGKT +AR +G
Sbjct: 1830 FEDIVGCQDIISRLGEYQQIAVVS---KARGVDPREQIPTNFVFIGPPGTGKTTIARKMG 1886
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
++ Y +GIL + V E +DLVGE+VGHTGPKT++
Sbjct: 1887 QVYYDMGILASAEVIECSASDLVGEYVGHTGPKTKK 1922
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
FLG+PGTGKT VA++ G++L +G+L V D +G ++G + KT+
Sbjct: 1588 VFLGSPGTGKTTVAKLYGKVLADLGLLSNGEVVLKTPADFIGAYLGESEKKTK 1640
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+ + +VGL ++K Q+ + + + R+ G + + R ++ LGNPGTGKT +AR
Sbjct: 1271 DSIMEMVGLEDVKKQVLEIKAKVDISIRQ---GASIASERF-NVVLLGNPGTGKTTIARQ 1326
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFV 291
+ L VG LP E + L E V
Sbjct: 1327 YAKFLVTVGALPGPSFIETTGSRLANEGV 1355
>gi|402550781|pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
gi|402550782|pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLH++A E+VK LL + A++ G+TPLH+AA+NG E KLLL+
Sbjct: 37 GKTPLHLAAENGHKEVVKLLLSQ----GADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQ 92
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
GA AK ++G TPLHL+ + VK LL AD + D++G+TPLD
Sbjct: 93 GADPNAKDSDGKTPLHLAAENGHKE----VVKLLLSQGADPNTSDSDGRTPLD 141
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 9/113 (7%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK LLE + ++ A + G+TPLH+AA+NG E KLLL+ GA AK ++G TPLH
Sbjct: 20 VKDLLE----NGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLH 75
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
L+ + VK LL AD +AKD++GKTPL HL+ G ++ +LLL
Sbjct: 76 LAAENGHKE----VVKLLLSQGADPNAKDSDGKTPL-HLAAENGHKEVVKLLL 123
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLH++A E+VK LL + A++ G+TPLH+AA+NG E KLLL+
Sbjct: 70 GKTPLHLAAENGHKEVVKLLLSQ----GADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQ 125
Query: 108 GAFIEAKANNGMTPLHLS 125
GA ++G TPL L+
Sbjct: 126 GADPNTSDSDGRTPLDLA 143
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+NG + K LL +GA + A ++G TPLHL+ + VK LL AD +AK
Sbjct: 11 AAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKE----VVKLLLSQGADPNAK 66
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D++GKTPL HL+ G ++ +LLL
Sbjct: 67 DSDGKTPL-HLAAENGHKEVVKLLL 90
>gi|169629320|ref|YP_001702969.1| hypothetical protein MAB_2234c [Mycobacterium abscessus ATCC 19977]
gi|420861873|ref|ZP_15325269.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0303]
gi|420868434|ref|ZP_15331816.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0726-RA]
gi|420872879|ref|ZP_15336256.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0726-RB]
gi|420909823|ref|ZP_15373136.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0125-R]
gi|420916279|ref|ZP_15379583.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0125-S]
gi|420920952|ref|ZP_15384249.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-S]
gi|420927104|ref|ZP_15390386.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-1108]
gi|420966604|ref|ZP_15429809.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0810-R]
gi|420977444|ref|ZP_15440623.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0212]
gi|420982824|ref|ZP_15445993.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-R]
gi|420990351|ref|ZP_15453507.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0206]
gi|421007119|ref|ZP_15470231.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0119-R]
gi|421012743|ref|ZP_15475830.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0122-R]
gi|421017652|ref|ZP_15480712.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0122-S]
gi|421023277|ref|ZP_15486324.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0731]
gi|421029269|ref|ZP_15492303.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0930-R]
gi|421034125|ref|ZP_15497147.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0930-S]
gi|421037446|ref|ZP_15500458.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0116-R]
gi|421043232|ref|ZP_15506233.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0116-S]
gi|169241287|emb|CAM62315.1| Conserved hypothetical protein (AAA ATPase?) [Mycobacterium
abscessus]
gi|392067904|gb|EIT93751.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0726-RA]
gi|392071907|gb|EIT97748.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0726-RB]
gi|392077034|gb|EIU02865.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0303]
gi|392120419|gb|EIU46185.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0125-S]
gi|392122197|gb|EIU47962.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0125-R]
gi|392130788|gb|EIU56534.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-S]
gi|392134337|gb|EIU60078.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-1108]
gi|392166644|gb|EIU92327.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0212]
gi|392172304|gb|EIU97975.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-R]
gi|392184630|gb|EIV10281.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0206]
gi|392200048|gb|EIV25655.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0119-R]
gi|392205283|gb|EIV30867.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0122-R]
gi|392210438|gb|EIV36005.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0122-S]
gi|392214246|gb|EIV39798.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0731]
gi|392228774|gb|EIV54286.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0930-R]
gi|392229127|gb|EIV54638.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0116-R]
gi|392230666|gb|EIV56176.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0930-S]
gi|392237084|gb|EIV62578.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
4S-0116-S]
gi|392252045|gb|EIV77514.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
3A-0810-R]
Length = 620
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 323 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 381
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 382 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 434
>gi|114567578|ref|YP_754732.1| ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338513|gb|ABI69361.1| ATPases of the AAA+ class-like protein [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 365
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 186 RALEACSETKAK-----MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGA 240
R L+ C++ +A + EL EL+ ++GL+ +K ++ + + RK GL A
Sbjct: 81 RVLDICNQNQADDETRTLPELLAELNELIGLNSVKAKVNNLIAFQKVQKLRKNQGLTT-A 139
Query: 241 RRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
H+AF G PGTGKT VARI+GR+ +G+L EV RTDL+ + G T K R+
Sbjct: 140 NNTLHLAFTGKPGTGKTTVARIVGRVYKQIGLLTKGHFIEVSRTDLIAGYQGQTALKVRK 199
Query: 301 RV 302
+
Sbjct: 200 VI 201
>gi|427778841|gb|JAA54872.1| Putative ankyrin [Rhipicephalus pulchellus]
Length = 1192
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQ-TPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++GDL ++L+ + ++N R+ Q TPLH +AGYN+ +V+ LL+ ++
Sbjct: 494 AKAGDLDIVKKLISSHVDIVNCRDVDGRQSTPLHFAAGYNRVAVVEFLLQH----GADVH 549
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E A LL+ HGA + TPLH + Y VK
Sbjct: 550 AKDKGGLVPLHNACSYGHYEVADLLVKHGASVNVSDLWKFTPLHEATAKG----KYDIVK 605
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL++ AD S K+ +G TPLD + +G
Sbjct: 606 LLLKHGADPSKKNRDGNTPLDLVKDG 631
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 12/143 (8%)
Query: 19 GCAQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVE 77
GC ++GD+ ++L+ P +N R+ TPLH +AG+ + ++V+ LL+ N
Sbjct: 26 GC-RNGDVTRVKKLV--TPHNVNSRDTTGRKSTPLHFAAGFGRRDVVEHLLQNGAN---- 78
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
+ A++ G PLH A G E +LLL H A A+ N TPLH + +I+ +
Sbjct: 79 VHAKDDGGLIPLHNACSFGHAEVVQLLLKHAADPNARDNWNYTPLHEA---AIKGKVDVC 135
Query: 138 VKTLLEYNADCSAKDNEGKTPLD 160
+ LL++ AD S ++ +GK PLD
Sbjct: 136 I-VLLQHGADASIRNTDGKIPLD 157
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN E+ + LLE + ++ AQ+ G PLH A+ G + A LL+ +
Sbjct: 710 TPLHLAAGYNNLEVAELLLE----NGADVNAQDKGGLIPLHNASSYGHLDIAALLIKYNT 765
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+ A G TPLH + R++ LL + AD + K++EG+TPLD
Sbjct: 766 VVNATDRWGFTPLHEAAQKG-RTQ---LCALLLAHGADSTMKNHEGQTPLD 812
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 33/229 (14%)
Query: 54 VSAGYNKAEIVKS--------LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
++ Y K E+++S LL + V A + TPLH+AA +LLL
Sbjct: 167 LTGDYRKDELLESARSGNEEKLLSLLTSINVNCHASDGRKSTPLHLAAGYNRVRIVQLLL 226
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
HGA + AK G+ PLH + Y + + L+++ A+ +A D TPL H +
Sbjct: 227 QHGADVHAKDKGGLVPLHNACSYG----HFEVTEMLIKHGANVNAMDLWQFTPL-HEAAS 281
Query: 166 PGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGM 225
A++ LLL H + L C M +L + + L ++
Sbjct: 282 KSRAEVCSLLLAHGADP----GLLNCHSKSPVMVAPSRDLQDRM--------LYEYKGHA 329
Query: 226 LLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILP 274
LLD R+A ++ P +A +P TG T L+MV + P
Sbjct: 330 LLDAARQADLARIKKYNTPDVANFKHPFTGDTS--------LHMVAVSP 370
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN+ IV+ LL+ ++ A++ G PLH A G E ++L+ HGA
Sbjct: 208 TPLHLAAGYNRVRIVQLLLQH----GADVHAKDKGGLVPLHNACSYGHFEVTEMLIKHGA 263
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ A TPLH + S R+E LL + AD + K+P+
Sbjct: 264 NVNAMDLWQFTPLHEAASKS-RAE---VCSLLLAHGADPGLLNCHSKSPV 309
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+D + R++ P + A + L LL EN + +N ++ PLH ++ Y +I
Sbjct: 702 RDSQGRNSTPLHL---AAGYNNLEVAELLLENGADVNAQDK-GGLIPLHNASSYGHLDIA 757
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
L+++ + A + +G TPLH AA+ G + LLLAHGA K + G TPL +
Sbjct: 758 ALLIKY----NTVVNATDRWGFTPLHEAAQKGRTQLCALLLAHGADSTMKNHEGQTPLDI 813
Query: 125 SVWYSIR 131
+ +R
Sbjct: 814 AAAEDVR 820
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL +GA + AK + G+ PLH + + V+ LL++ A
Sbjct: 55 TPLHFAAGFGRRDVVEHLLQNGANVHAKDDGGLIPLHNACSFG----HAEVVQLLLKHAA 110
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
D +A+DN TPL H + G + +LL H + R
Sbjct: 111 DPNARDNWNYTPL-HEAAIKGKVDVCIVLLQHGADASIR 148
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 31/178 (17%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A + LLR+N ++ NE+N TPLH++A + +IV L++ + ++ A + G+T
Sbjct: 377 AIELLLRKNANI-NEKNEEYL-TPLHLAASKSHLDIVDILIK----NGAKVNALDSLGQT 430
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT---------------PLHLS------V 126
LH ++ G +A +LLL+ GA + G T P H S +
Sbjct: 431 ALHRCSREGNVQACRLLLSAGADPGIVSGQGYTASQLASDAVQQLLHEPQHSSGDAEFQL 490
Query: 127 WYSIRSEDYATVKTLLEYNAD---CSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ ++ D VK L+ + D C D TPL H + G + E LL H +
Sbjct: 491 LEAAKAGDLDIVKKLISSHVDIVNCRDVDGRQSTPL-HFAAGYNRVAVVEFLLQHGAD 547
>gi|419712717|ref|ZP_14240174.1| hypothetical protein OUW_24331 [Mycobacterium abscessus M93]
gi|382937498|gb|EIC61852.1| hypothetical protein OUW_24331 [Mycobacterium abscessus M93]
Length = 620
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 323 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 381
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 382 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 434
>gi|116075371|ref|ZP_01472631.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. RS9916]
gi|116067568|gb|EAU73322.1| probable RuBisCo-expression protein CbbX [Synechococcus sp. RS9916]
Length = 301
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTM 258
LE ++VGL +K ++R+ A +L+++ R+++ L A P HM+F G PGTGKT
Sbjct: 20 LEQLDQDLVGLTPVKTRIREIAALLLVEQARRSMDLTSAA---PGLHMSFTGRPGTGKTT 76
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA + +L+ +G L V V R DLVG++VGHT PKTR +
Sbjct: 77 VAMRISEILHRLGYLRKGHVVTVTRDDLVGQYVGHTAPKTREMI 120
>gi|148257626|ref|YP_001242211.1| CbbX-like protein [Bradyrhizobium sp. BTAi1]
gi|146409799|gb|ABQ38305.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. BTAi1]
Length = 310
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ E +++L+ EL VGL +K ++R+ A +L++ R+ +GL A P
Sbjct: 20 RREFESV-EIAPVLEQLDREL---VGLAPVKTRIREIASLLLMERIRRKMGL---ATTFP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 129
>gi|418619757|ref|ZP_13182569.1| ATPase, AAA family [Staphylococcus hominis VCU122]
gi|374823755|gb|EHR87747.1| ATPase, AAA family [Staphylococcus hominis VCU122]
Length = 645
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL+N+VGL K Q + + +++E +K G+KV H + GNPGTGKT VAR++
Sbjct: 392 ELNNLVGLSNAKKQANDFIRVHVVNEAKKKKGIKV-EDNSLHSIYKGNPGTGKTTVARLI 450
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
++L+ ++ D + EV R DLV FVG T KT +
Sbjct: 451 AQILFQKSVIKKDLLVEVTRQDLVAGFVGQTAIKTEK 487
>gi|421049182|ref|ZP_15512177.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|392241095|gb|EIV66585.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense CCUG
48898]
Length = 620
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 323 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 381
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 382 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 434
>gi|418248648|ref|ZP_12875034.1| hypothetical protein MAB47J26_08480 [Mycobacterium abscessus 47J26]
gi|420931291|ref|ZP_15394566.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-151-0930]
gi|420939788|ref|ZP_15403057.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-152-0914]
gi|420941548|ref|ZP_15404806.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-153-0915]
gi|420948251|ref|ZP_15411501.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-154-0310]
gi|420951801|ref|ZP_15415045.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0626]
gi|420955971|ref|ZP_15419208.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0107]
gi|420961590|ref|ZP_15424816.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-1231]
gi|420997777|ref|ZP_15460915.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0912-R]
gi|421002216|ref|ZP_15465342.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0912-S]
gi|353453141|gb|EHC01535.1| hypothetical protein MAB47J26_08480 [Mycobacterium abscessus 47J26]
gi|392136050|gb|EIU61787.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-151-0930]
gi|392145303|gb|EIU71028.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-152-0914]
gi|392151030|gb|EIU76742.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-153-0915]
gi|392155281|gb|EIU80987.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
1S-154-0310]
gi|392157113|gb|EIU82810.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0626]
gi|392187489|gb|EIV13130.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0912-R]
gi|392197429|gb|EIV23044.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0912-S]
gi|392251624|gb|EIV77096.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-1231]
gi|392252870|gb|EIV78338.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0107]
Length = 620
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 323 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 381
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 382 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 434
>gi|299830511|ref|YP_003734957.1| hypothetical protein PyulOm_p008 [Durinskia baltica]
gi|297384875|gb|ADI40174.1| hypothetical protein [Durinskia baltica]
Length = 273
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A +E ++ L+ EL VGL +K ++R+ A +L+D+ R+ LG+ A HM+F
Sbjct: 13 AKTEISKILNLLDEEL---VGLAPVKTRIREIAALLLIDKLRRNLGI-TSANPGLHMSFT 68
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G+PGTGKT V + +LY +G + + V R DLVG+++GHT PKT+
Sbjct: 69 GSPGTGKTTVGLKMADILYQLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 118
>gi|126348248|emb|CAJ89969.1| putative sporulation protein K-like protein [Streptomyces
ambofaciens ATCC 23877]
Length = 1107
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL+ +VGL +K ++ + +R A GL R H+ F G PGTGKT VAR+
Sbjct: 841 ELTAMVGLGAVKREVADLVSLLTNARQRIAAGLP-APRISNHLVFSGPPGTGKTTVARLY 899
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
RLL+ +G+LP D + EV R DLVG++VGHT +T+
Sbjct: 900 ARLLHSLGVLPRDSLVEVARADLVGQYVGHTAQRTK 935
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +VGL +K Q+ L ERR+ LG+ V + H+ F G PGTGKT VAR+
Sbjct: 561 ELEALVGLENVKHQVNTLVNLNQLAERRRRLGMPVPSMSR-HLIFAGPPGTGKTTVARLY 619
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
G +L +G+L + + EV R DLV + +G T KT
Sbjct: 620 GGILADLGVLRSGHLVEVARADLVAQVIGGTAIKT 654
>gi|414580476|ref|ZP_11437617.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-1215]
gi|420877519|ref|ZP_15340888.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0304]
gi|420883065|ref|ZP_15346428.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0421]
gi|420889048|ref|ZP_15352399.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0422]
gi|420893652|ref|ZP_15356994.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0708]
gi|420898852|ref|ZP_15362187.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0817]
gi|420904564|ref|ZP_15367883.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-1212]
gi|420971484|ref|ZP_15434679.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0921]
gi|392089010|gb|EIU14830.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0304]
gi|392090035|gb|EIU15851.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0421]
gi|392090141|gb|EIU15955.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0422]
gi|392102242|gb|EIU28029.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0708]
gi|392106561|gb|EIU32346.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0817]
gi|392107029|gb|EIU32812.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-1212]
gi|392120300|gb|EIU46067.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-1215]
gi|392168195|gb|EIU93874.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
5S-0921]
Length = 620
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 323 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 381
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 382 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 434
>gi|123464707|ref|XP_001317121.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121899847|gb|EAY04898.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 1017
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 15/197 (7%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D S++ + T A D ++L + + +N +N T LH +A +K EI K
Sbjct: 756 DINSKNDEGMTALHTAARNDKTEISKILISHGADINSKND-EGMTALHTAARNDKTEISK 814
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ + ++ ++N G T LH AA+N E +K+L++HGA I +K + GMT LH +
Sbjct: 815 ILI----SHGADINSKNDEGMTALHTAARNDKTEISKILISHGADINSKNDEGMTALHTA 870
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH-----SE 180
R++ K L+ + AD AK++EG TPL + G + ++ LLL H S+
Sbjct: 871 A----RNDKTEISKILISHGADVDAKESEGNTPLHFATKNYGWSVMK-LLLSHGADINSQ 925
Query: 181 EQRKRRALEACSETKAK 197
+ + L E+K K
Sbjct: 926 NKDGKTPLHYAVESKNK 942
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D S++ + T A D ++L + + +N +N T LH +A +K EI K
Sbjct: 822 DINSKNDEGMTALHTAARNDKTEISKILISHGADINSKND-EGMTALHTAARNDKTEISK 880
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ + +++A+ G TPLH A KN KLLL+HGA I ++ +G TPLH
Sbjct: 881 ILI----SHGADVDAKESEGNTPLHFATKNYGWSVMKLLLSHGADINSQNKDGKTPLH-- 934
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
Y++ S++ V L+ + A+ +AKD G+TPL+
Sbjct: 935 --YAVESKNKKQVSFLISHGANINAKDINGETPLN 967
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 10/176 (5%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D S++ + T A D ++L + + +N +N T LH +A +K EI K
Sbjct: 690 DINSKNDEGMTALHTAARNDKTEISKILISHGADINSKND-EGMTALHTAARNDKTEISK 748
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ + ++ ++N G T LH AA+N E +K+L++HGA I +K + GMT LH +
Sbjct: 749 ILI----SHGADINSKNDEGMTALHTAARNDKTEISKILISHGADINSKNDEGMTALHTA 804
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
R++ K L+ + AD ++K++EG T L H + ++ ++L+ H +
Sbjct: 805 A----RNDKTEISKILISHGADINSKNDEGMTAL-HTAARNDKTEISKILISHGAD 855
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL + YN EIV+ LL ++ ++ A+N YG PLH N E ++LL+HG
Sbjct: 534 ETPLQYATEYNCKEIVEILL----SNGADVNAKNKYGRIPLHYIKNNDTKEVTEILLSHG 589
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK NNG T L ++ + S L+ + AD ++K+ EG T L H +
Sbjct: 590 ADVNAKDNNGDTSLLIAAYASCEE----ITNILISHGADVNSKNYEGMTAL-HAAARNDK 644
Query: 169 AKLRELLLWHSEE 181
++ ++L+ H +
Sbjct: 645 TEISKILISHGAD 657
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH +A +K EI K L+ + ++ ++N G T LH AA+N E +K+L++HGA
Sbjct: 634 TALHAAARNDKTEISKILI----SHGADINSKNDEGMTALHTAARNDKTEISKILISHGA 689
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I +K + GMT LH + R++ K L+ + AD ++K++EG T L H +
Sbjct: 690 DINSKNDEGMTALHTAA----RNDKTEISKILISHGADINSKNDEGMTAL-HTAARNDKT 744
Query: 170 KLRELLLWHSEE 181
++ ++L+ H +
Sbjct: 745 EISKILISHGAD 756
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 11/121 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+N +N TPLH++A N I++ L+ + ++ A+N ETPL A + C E
Sbjct: 493 INSKNK-YGNTPLHLAAIRNLKNIIELLISY----DADVNAKNENEETPLQYATEYNCKE 547
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDNEGKTP 158
++LL++GA + AK G PLH I++ D V + LL + AD +AKDN G T
Sbjct: 548 IVEILLSNGADVNAKNKYGRIPLHY-----IKNNDTKEVTEILLSHGADVNAKDNNGDTS 602
Query: 159 L 159
L
Sbjct: 603 L 603
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V++ ++N YG TPLH+AA +LL+++ A + AK N TPL + Y+ +
Sbjct: 491 VDINSKNKYGNTPLHLAAIRNLKNIIELLISYDADVNAKNENEETPLQYATEYNCKE--- 547
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
V+ LL AD +AK+ G+ PL ++ N + ++ E+LL H +
Sbjct: 548 -IVEILLSNGADVNAKNKYGRIPLHYIKNN-DTKEVTEILLSHGAD 591
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H SA N EI + L+ + V++ + +G T LH+A E +LLL+HGA
Sbjct: 304 TAIHYSAVGNCKEIAEFLI----SHGVDINWKQKHGYTALHLAVNINSEEVVELLLSHGA 359
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ AK TPLH Y+ ++ + L+ Y AD +AKDN TP+ + S +
Sbjct: 360 NVNAKNKKEETPLH----YATKNNCKGMAELLISYGADVNAKDNYEYTPI-YWSIIKINK 414
Query: 170 KLRELLLWHSEEQ 182
++ ELL+ H ++
Sbjct: 415 EITELLISHGADK 427
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++ N E+V+ LL N + A+N ETPLH A KN C A+LL+++GA
Sbjct: 337 TALHLAVNINSEEVVELLLSHGAN----VNAKNKKEETPLHYATKNNCKGMAELLISYGA 392
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
+ AK N TP +++SI + + L+ + AD + K
Sbjct: 393 DVNAKDNYEYTP----IYWSIIKINKEITELLISHGADKNIK 430
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 5/104 (4%)
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRS 132
N+ +++ ++ G T +H +A C E A+ L++HG I K +G T LHL+V +I S
Sbjct: 290 NENIDISKISLAGCTAIHYSAVGNCKEIAEFLISHGVDINWKQKHGYTALHLAV--NINS 347
Query: 133 EDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+ V+ LL + A+ +AK+ + +TPL H + + ELL+
Sbjct: 348 EE--VVELLLSHGANVNAKNKKEETPL-HYATKNNCKGMAELLI 388
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
TPLH + ++K LL + ++ +QN G+TPLH A ++ + L++H
Sbjct: 896 GNTPLHFATKNYGWSVMKLLL----SHGADINSQNKDGKTPLHYAVESKNKKQVSFLISH 951
Query: 108 GAFIEAKANNGMTPLHLSV 126
GA I AK NG TPL+L++
Sbjct: 952 GANINAKDINGETPLNLAI 970
Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
++ LH A + EI EW + + + L + A + KLL+ HG
Sbjct: 435 KSMLHFVADVDNKEIE----EWIRSHWTNINTKGDVNLEALKLEAMENIKDITKLLILHG 490
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
I +K G TPLHL+ ++++ ++ L+ Y+AD +AK+ +TPL +
Sbjct: 491 VDINSKNKYGNTPLHLAAIRNLKN----IIELLISYDADVNAKNENEETPLQY 539
>gi|392953838|ref|ZP_10319390.1| Rubisco accessary protein AAA type ATPase CbbX [Hydrocarboniphaga
effusa AP103]
gi|391857737|gb|EIT68267.1| Rubisco accessary protein AAA type ATPase CbbX [Hydrocarboniphaga
effusa AP103]
Length = 269
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 214 LKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGRLLYMVGI 272
+K ++ + A +++D+ R+A GL+ GA P HM F GNPGTGKT VA+ + +L+ +G
Sbjct: 1 MKERIAEIAAYLIVDKARRAQGLRTGA--PSLHMCFTGNPGTGKTTVAQRMADILHRLGY 58
Query: 273 LPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ ++ V R DLVG+++GHT PKTR
Sbjct: 59 IRNHQLVSVTRDDLVGQYIGHTAPKTR 85
>gi|333023493|ref|ZP_08451557.1| putative sporulation protein K [Streptomyces sp. Tu6071]
gi|332743345|gb|EGJ73786.1| putative sporulation protein K [Streptomyces sp. Tu6071]
Length = 907
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP----HMAF 248
+ A++ EL EL +VGL +K ++ + M + + R+ GL PP H+ F
Sbjct: 627 DDAARLAELHAELDRLVGLDGVKREVLTLTRLMQMVKVRQDAGLA-----PPPLSRHLVF 681
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GN GTGKT VAR+ G L +G+L + E R+DLVGE+VGHT P+T
Sbjct: 682 AGNAGTGKTTVARLYGGFLAALGLLSRGHLVETDRSDLVGEYVGHTAPRT 731
>gi|299830304|ref|YP_003734519.1| Rubisco expression protein [Kryptoperidinium foliaceum]
gi|297385006|gb|ADI40304.1| Rubisco expression protein [Kryptoperidinium foliaceum]
Length = 289
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 6/111 (5%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAF 248
A +E ++ L+ EL VGL +K ++R+ A +L+D+ RK LG+ G P HM+F
Sbjct: 13 AKTEIAKILNLLDEEL---VGLAPVKSRIREIAALLLIDKIRKNLGITAG--NPGLHMSF 67
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G+PGTGKT V + +LY +G + + V R DLVG+++GHT PKT+
Sbjct: 68 TGSPGTGKTTVGLKMADILYQLGYIRKGHLLTVTRDDLVGQYIGHTAPKTK 118
>gi|225849928|ref|YP_002730162.1| pfs, nacht and ankyrin domain protein [Persephonella marina EX-H1]
gi|225646310|gb|ACO04496.1| pfs, nacht and ankyrin domain protein [Persephonella marina EX-H1]
Length = 473
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H + GD+ + L++ + N +N + TPLH +A + A+++K LL+ +
Sbjct: 89 LHIASMKGDINLVKELIKSGADV-NAKN-LEGWTPLHEAAFFGYAQVIKLLLD----NGA 142
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
E++A+N G TPLHMAA +G +A ++L+ +GA I + + G TPLH + + +
Sbjct: 143 EIDAKNGNGNTPLHMAAMSGYPDAVEILIEYGADINEQNSEGWTPLHFAAYKG----ELE 198
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
TVK L+E A+ + KD + +TPL
Sbjct: 199 TVKILVEKGAELNIKDKDEETPL 221
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 76/168 (45%), Gaps = 41/168 (24%)
Query: 27 LAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGE 86
+ F + L E + +N R+ LHV A EI K LL+ + ++ ++ YG
Sbjct: 296 IGFVKKLLEKGANVNARDNKYGDYVLHVVARNGNEEIAKLLLK----NGAKVNVRDEYGN 351
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM--------------------------- 119
TPLH A+ G + AKLL+ HGA I AK N G
Sbjct: 352 TPLHAASLEGHFKVAKLLIDHGADINAKNNKGWTPLFKAAMAGKIKVAILLLTKGADPNV 411
Query: 120 ------TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
TPLHL+V R D VK L+++ AD +AKD GKTPLD+
Sbjct: 412 KGKYKETPLHLAVLR--RHTD--MVKLLIKHGADVNAKDLRGKTPLDY 455
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL +N + ++ +N TPLH++A + V+ L+E+ ++ QN G TPLH
Sbjct: 135 KLLLDNGAEIDAKNG-NGNTPLHMAAMSGYPDAVEILIEYGA----DINEQNSEGWTPLH 189
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA G E K+L+ GA + K + TPLH SV + K L+E A +A
Sbjct: 190 FAAYKGELETVKILVEKGAELNIKDKDEETPLHKSV----SQRKFNVTKYLVEKGAYINA 245
Query: 151 KDNEGKTPL 159
++ GKTPL
Sbjct: 246 RNKNGKTPL 254
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G+L ++L E + LN ++ +TPLH S K + K L+E
Sbjct: 188 LHFAAYKGELETV-KILVEKGAELNIKDK-DEETPLHKSVSQRKFNVTKYLVE----KGA 241
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ A+N G+TPL +A + L+ GA I AK N+G TPLH + +
Sbjct: 242 YINARNKNGKTPLLIAISGVDEKTVNFLIQKGADINAKDNDGWTPLHEATFRG----HIG 297
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
VK LLE A+ +A+DN+ + H+ G+ ++ +LLL
Sbjct: 298 FVKKLLEKGANVNARDNKYGDYVLHVVARNGNEEIAKLLL 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVE-----------LEAQNMYGETPLHMAAK 94
+ + T + S G +AE+ K L E + + + +N+ G +PLH+A+
Sbjct: 35 IFSLTFISPSIGATRAELNKQLTEAISKEDIPKIKELIGKGAGVNIKNIIGNSPLHIASM 94
Query: 95 NGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDN 153
G K L+ GA + AK G TPLH + ++ YA V K LL+ A+ AK+
Sbjct: 95 KGDINLVKELIKSGADVNAKNLEGWTPLHEAAFFG-----YAQVIKLLLDNGAEIDAKNG 149
Query: 154 EGKTPLDHLSNGPGSAKLRELLLWHSEE 181
G TPL H++ G E+L+ + +
Sbjct: 150 NGNTPL-HMAAMSGYPDAVEILIEYGAD 176
>gi|326384554|ref|ZP_08206233.1| AAA ATPase central domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326196688|gb|EGD53883.1| AAA ATPase central domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 576
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+ +EL +GL +K Q+ + + L + R GL+ +R H+AF G PGTGKT +A
Sbjct: 296 VADELGAQIGLGPVKDQVERLRAAVTLAQLRAEKGLRTQSR-SLHLAFTGPPGTGKTTIA 354
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
R++ RL +G+L TD V EV R DLVG+ +G T PKT
Sbjct: 355 RLVARLYRALGLLATDTVVEVSRRDLVGQHLGSTAPKT 392
>gi|123487422|ref|XP_001324944.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907835|gb|EAY12721.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 587
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 84/148 (56%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL N + +NE+N A T LH++A N E V+ L+ N + +N YGET LH
Sbjct: 363 ELLISNGANINEKND-DAGTALHIAAFENHKETVELLISHGAN----INEKNDYGETALH 417
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A++L++HG I K ++G T LH +V+Y+ + T + L+ + + +A
Sbjct: 418 VAAYNNSKETAEILISHGININEKDDDGGTALHNAVYYNYKE----TAELLISHGININA 473
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
K++ G+T L H++ ++ ELL+ H
Sbjct: 474 KNDNGRTAL-HVAVYDNRKEIAELLISH 500
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ + +T LH++A YN E V+ L+ N + +N GET LH+AA N E
Sbjct: 306 INEKD-IDGKTALHIAARYNCIETVELLISHGAN----INEKNKDGETSLHIAANNNSKE 360
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL+++GA I K ++ T LH++ + + + TV+ L+ + A+ + K++ G+T L
Sbjct: 361 TAELLISNGANINEKNDDAGTALHIAAFENHKE----TVELLISHGANINEKNDYGETAL 416
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ S + E+L+ H
Sbjct: 417 -HVAAYNNSKETAEILISH 434
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + YN E + L+ + + A+N G T LH+A + E A+LL++HGA
Sbjct: 447 TALHNAVYYNYKETAELLISHG----ININAKNDNGRTALHVAVYDNRKEIAELLISHGA 502
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
I K N+G T LH + + + T + L+ + A+ + KD G+T LD
Sbjct: 503 NINEKNNDGKTALHTAASNNSKE----TAEILISHGANINEKDEYGQTALD 549
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ SL E+ + + +++ G+T LH+AA+ C E +LL++HGA I K +G T LH
Sbjct: 292 IPSLCEYFLSTGANINEKDIDGKTALHIAARYNCIETVELLISHGANINEKNKDGETSLH 351
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++ + T + L+ A+ + K+++ T L H++ + ELL+ H
Sbjct: 352 IAA----NNNSKETAELLISNGANINEKNDDAGTAL-HIAAFENHKETVELLISH 401
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LHV+ N+ EI + L+ N + +N G+T LH AA N E A++L++HG
Sbjct: 479 RTALHVAVYDNRKEIAELLISHGAN----INEKNNDGKTALHTAASNNSKETAEILISHG 534
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
A I K G T L + +++ + T + L ++ + KDN G
Sbjct: 535 ANINEKDEYGQTALDTATFFNHKE----TAELLKSHDIKINKKDNGG 577
>gi|332668257|ref|YP_004451045.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
gi|332337071|gb|AEE54172.1| AAA ATPase central domain protein [Haliscomenobacter hydrossis DSM
1100]
Length = 878
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
+ + D+ +++GL ++K Q+R A + + RK G H F+GN
Sbjct: 293 QDDRGSFDDAMTSFDSLIGLSDIKQQVRNHADYIKFLQLRKERGFDESDNINVHSVFIGN 352
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
PGTGKT VA ++G L +G+L V EV R DLVGE++G T PK + +
Sbjct: 353 PGTGKTTVAGMMGLLYRKMGLLSKGHVHEVDRVDLVGEYIGQTAPKVKEAI 403
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+EL+ ++G+ ++K Q+ + + L + G V H +GNPGTGKT VARI
Sbjct: 594 DELNRMIGMDKIKAQIHEMVR---LVRFYRETGKDVLNSFFLHTVLIGNPGTGKTTVARI 650
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
L ++ +G+L + E R LV FVG T KT ++ L + +
Sbjct: 651 LTKIYKALGMLERGHMVETDRQGLVAGFVGQTAIKTNEKIEEALGGVLFI 700
>gi|418420320|ref|ZP_12993501.1| hypothetical protein MBOL_20470 [Mycobacterium abscessus subsp.
bolletii BD]
gi|364000157|gb|EHM21358.1| hypothetical protein MBOL_20470 [Mycobacterium abscessus subsp.
bolletii BD]
Length = 550
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 253 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 311
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 312 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 364
>gi|397679409|ref|YP_006520944.1| hypothetical protein MYCMA_1193 [Mycobacterium massiliense str. GO
06]
gi|395457674|gb|AFN63337.1| Uncharacterized protein MYCMA_1193 [Mycobacterium massiliense str.
GO 06]
Length = 604
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 307 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 365
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 366 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 418
>gi|152966808|ref|YP_001362592.1| ATPase AAA [Kineococcus radiotolerans SRS30216]
gi|151361325|gb|ABS04328.1| AAA ATPase central domain protein [Kineococcus radiotolerans
SRS30216]
Length = 379
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
L+ EL +VGL +K Q+R + + RRKA GL A H+ FLGNPGTGKT VA
Sbjct: 89 LQAELDALVGLSTVKEQVRALVAFLQVQARRKAHGLPEAATSQ-HLVFLGNPGTGKTTVA 147
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
R+L + +G+L + EV R LVG++VG T KT R + L + +
Sbjct: 148 RLLAEMYRALGLLQKGHLVEVDRAALVGQYVGETAIKTDRVIRRALDGVLFI 199
>gi|365870123|ref|ZP_09409667.1| hypothetical protein MMAS_20690 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|363997312|gb|EHM18524.1| hypothetical protein MMAS_20690 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
Length = 550
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 253 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 311
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 312 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 364
>gi|420991939|ref|ZP_15455087.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0307]
gi|392186553|gb|EIV12199.1| type VII secretion AAA-ATPase EccA [Mycobacterium massiliense
2B-0307]
Length = 550
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 253 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 311
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 312 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 364
>gi|123477041|ref|XP_001321690.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121904521|gb|EAY09467.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 549
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 12/151 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI + L+ + ++ A+N G TPLH AA N E A++L+++GA
Sbjct: 384 TPLHLAATNNRKEIAEILIS----NGADINAENKDGWTPLHYAASNNSKETAEILISNGA 439
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH Y+ R T + L+ AD +AKD +G TPL H +
Sbjct: 440 DINAKDKDGYTPLH----YATRYNSKETAEILISNGADINAKDKDGYTPL-HYAVSNNYK 494
Query: 170 KLRELLLWHSEEQRKRRALEACSETKAKMDE 200
+ E+L + Q K L KAK+ E
Sbjct: 495 ETAEILKSNKTRQDKTVMLNF---VKAKVQE 522
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+N Y TPLH+AA N E A++L+++GA
Sbjct: 351 TPLHYAASNNSKETAEILIS----NGADINAENKYRWTPLHLAATNNRKEIAEILISNGA 406
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I A+ +G TPLH Y+ + T + L+ AD +AKD +G TPL H + S
Sbjct: 407 DINAENKDGWTPLH----YAASNNSKETAEILISNGADINAKDKDGYTPL-HYATRYNSK 461
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 462 ETAEILI 468
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N + + L+ + ++ A++ G TPLH AA N E A++L+++GA
Sbjct: 318 TPLHYAASDNNKKTAEILIS----NGADINAEDADGCTPLHYAASNNSKETAEILISNGA 373
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I A+ TPLHL+ + R E + L+ AD +A++ +G TPL H + S
Sbjct: 374 DINAENKYRWTPLHLAATNN-RKE---IAEILISNGADINAENKDGWTPL-HYAASNNSK 428
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 429 ETAEILI 435
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 80/158 (50%), Gaps = 20/158 (12%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDKVEL 78
C+Q +L +F L + N+ N +P H+S SLLE+ ++ ++
Sbjct: 264 CSQYNNLQSFLVYLDQ----TNDINTCFVYSPNFHLS----------SLLEYFISNGADI 309
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
A++ TPLH AA + + A++L+++GA I A+ +G TPLH Y+ + T
Sbjct: 310 NAKDGDESTPLHYAASDNNKKTAEILISNGADINAEDADGCTPLH----YAASNNSKETA 365
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ L+ AD +A++ TPL HL+ ++ E+L+
Sbjct: 366 EILISNGADINAENKYRWTPL-HLAATNNRKEIAEILI 402
>gi|155370928|ref|YP_001426462.1| hypothetical protein FR483_N830L [Paramecium bursaria Chlorella
virus FR483]
gi|155124248|gb|ABT16115.1| hypothetical protein FR483_N830L [Paramecium bursaria Chlorella
virus FR483]
Length = 292
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LLE
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLLE----HGA 55
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 56 HIDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D + L+E+ AD SAKD++G TPL
Sbjct: 111 --ASDGDVARMLIEHGADISAKDSDGCTPL 138
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 50 TPLHVSAGYNKAEIVK--------------SLLEWPGNDKV---------ELEAQNMYGE 86
TPLH+++ + A ++ + L W GN + ++ A++ +G
Sbjct: 106 TPLHIASDGDVARMLIEHGADISAKDSDGCTPLYWAGNKCIARLLTAHGSDVSAKDRHGY 165
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH A + G + A++LL H + A+ +G TPLH++ S R Y V+ LLE+ A
Sbjct: 166 TPLHHA-RTG--DIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRVLLEHGA 218
Query: 147 DCSAKDNEGKTPLDH 161
D AKDN+G+TP +H
Sbjct: 219 DIRAKDNDGRTPFEH 233
>gi|419715449|ref|ZP_14242853.1| hypothetical protein S7W_13394 [Mycobacterium abscessus M94]
gi|382944017|gb|EIC68327.1| hypothetical protein S7W_13394 [Mycobacterium abscessus M94]
Length = 440
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +LS +GL ++K Q+ + + + RR+ GL VG R H+ F G PGTGKT +
Sbjct: 143 EAEQQLSEFIGLEQVKDQVARLKSSVAMALRRQDRGLAVG-HRTHHLVFAGPPGTGKTTI 201
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 202 ARVVAKIYCGLGLLKRENVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 254
>gi|389863487|ref|YP_006365727.1| AAA ATPase [Modestobacter marinus]
gi|388485690|emb|CCH87236.1| Putative AAA ATPase [Modestobacter marinus]
Length = 328
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+E EL ++GL +K Q++ + + RRKA GL A H+ FLGNPGTGKT VA
Sbjct: 51 IEAELDGLIGLEVVKEQVQALVAFLQVQARRKAHGLPEAAT-SQHLVFLGNPGTGKTTVA 109
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
R+L + VG+L + EV R LVG++VG T KT R V L + +
Sbjct: 110 RLLAEMYRAVGLLQKGHLVEVDRAALVGQYVGATAIKTDRVVRRALDGVLFI 161
>gi|202071271|gb|ACH95428.1| CbbX [Mycobacterium sp. DSM 3803]
Length = 334
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 4/104 (3%)
Query: 198 MDELENEL-SNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTG 255
+DE+ EL + +VGL +K ++ + A +L+D R G V A +P HM+F GNPGTG
Sbjct: 55 VDEVLAELDAELVGLESVKTRIAEIAALLLVDRMRGRFG--VSAPQPTLHMSFTGNPGTG 112
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + LL+ +G L + + R DLVGE+VGHT PKT+
Sbjct: 113 KTTVAMRMADLLHRLGYLRRGHLVKCTRDDLVGEYVGHTAPKTK 156
>gi|392393725|ref|YP_006430327.1| AAA ATPase [Desulfitobacterium dehalogenans ATCC 51507]
gi|390524803|gb|AFM00534.1| AAA+ family ATPase [Desulfitobacterium dehalogenans ATCC 51507]
Length = 321
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 76/147 (51%), Gaps = 2/147 (1%)
Query: 166 PGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGM 225
P + K ++ SE R R+ + SE E+ EL+ +VGL +K + + +
Sbjct: 20 PRTHKTAAIVDSSSELSRGRKVTQHSSENSTTA-EIIAELNALVGLTTVKRLIYEIQAYI 78
Query: 226 LLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTD 285
+ +RR L V HM F GNPGTGKT VAR++GRL + +L + E +R D
Sbjct: 79 EIQKRRTREKL-VAEPLVLHMIFRGNPGTGKTTVARLIGRLFKEMDVLQKGHIIECERAD 137
Query: 286 LVGEFVGHTGPKTRRRVGHLLSEITCL 312
LVGE++GHT KTR V L I +
Sbjct: 138 LVGEYIGHTAQKTRDMVKKALGGILFI 164
>gi|155122515|gb|ABT14383.1| hypothetical protein MT325_M829L [Paramecium bursaria chlorella
virus MT325]
Length = 292
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 83/155 (53%), Gaps = 23/155 (14%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LLE +
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLLEHGAH--- 56
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 57 -IDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
+ D + L+E+ AD SAKD++G TPL SN
Sbjct: 111 --ASDGDMARMLIEHGADISAKDSDGCTPLYWASN 143
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 18/152 (11%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A GD+ R+L E+ + ++ ++ TPL+ ++ NK + LL G+D + A
Sbjct: 111 ASDGDM---ARMLIEHGADISAKDS-DGCTPLYWAS--NKC--IARLLTAHGSD---VSA 159
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ +G TPLH A + G + A++LL H + A+ +G TPLH++ S R Y V+
Sbjct: 160 KDRHGYTPLHHA-RTG--DIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRV 212
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLR 172
LLE+ AD AKDN G+ P +H S LR
Sbjct: 213 LLEHGADIRAKDNNGRMPFEHWDPKQRSQFLR 244
>gi|11465694|ref|NP_053838.1| CbbX [Porphyra purpurea]
gi|1705765|sp|P51228.1|CFXQ_PORPU RecName: Full=Protein cfxQ homolog
gi|1276694|gb|AAC08114.1| ORF301 (chloroplast) [Porphyra purpurea]
Length = 301
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 195 KAKMDELENELSN-IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
K ++ E+ NEL+ ++GL +K ++R+ A +L+D R+ L L V HM+F G+PG
Sbjct: 22 KTQIQEVLNELNQELIGLVPVKTRIREIAALLLIDRLRRKLEL-VSGNPGLHMSFTGSPG 80
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
TGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 81 TGKTTVAMKMADILHRLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 126
>gi|339627920|ref|YP_004719563.1| ATPase AAA [Sulfobacillus acidophilus TPY]
gi|339285709|gb|AEJ39820.1| AAA ATPase, central domain protein [Sulfobacillus acidophilus TPY]
Length = 333
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHM----AFLGNPGT 254
+++ +L ++GL ++K +R+ + + R+ GL PHM F G PGT
Sbjct: 65 EDVLRDLDQLIGLTDIKRMVREIRAWVEIQALRENAGLATD----PHMLHMVFFRGRPGT 120
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
GKT VARILGRL + +G+L + EV+R DLVGE++GHT KTR + L + L
Sbjct: 121 GKTTVARILGRLFHALGVLAKGHLVEVERADLVGEYIGHTAQKTRDVIKRALGGVMFL 178
>gi|378787267|gb|AFC39898.1| Cbbx [Porphyra umbilicalis]
Length = 301
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 195 KAKMDELENELSN-IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
K ++ E+ NEL+ ++GL +K ++R+ A +L+D R+ L L V HM+F G+PG
Sbjct: 22 KTQIQEVLNELNQELIGLVPVKTRIREIAALLLIDRLRRKLEL-VSGNPGLHMSFTGSPG 80
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
TGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 81 TGKTTVAMKMADILHRLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 126
>gi|123353642|ref|XP_001295470.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121874336|gb|EAX82540.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 685
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
LNE+ +T LH + N EIVK L+ N LE ++++G+T LH AA N C E
Sbjct: 437 LNEKCE-YGKTALHFATDNNIIEIVKLLVLNDAN----LEEKDLFGKTALHNAAHNNCKE 491
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HGA I+ K G T LHL+ Y+ + V+ LL + + + KD +GKT L
Sbjct: 492 TAELLISHGANIDEKDQFGRTALHLAAEYNCKE----IVELLLSLDTNINEKDEKGKTSL 547
Query: 160 DHLSNGPGSAKLRELLLWH 178
H + ++ ELL+ H
Sbjct: 548 -HYATEYNCKEIVELLIAH 565
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 15/158 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH + YN EIV+ L+ N +E +++ G+T LH AA N E
Sbjct: 536 INEKDE-KGKTSLHYATEYNCKEIVELLIAHGAN----IEEKDIDGQTSLHYAACNNYKE 590
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
++L++HGA I K G T LH + +Y+ + T + L+ + A + KDN+GKT L
Sbjct: 591 IIEILISHGAKINEKDKKGKTALHNTAYYNYKE----TAELLISHGAKINNKDNDGKTAL 646
Query: 160 DHLSNGPGSAKLRELLL-----WHSEEQRKRRALEACS 192
H++ + E+L+ + +++ R AL+ CS
Sbjct: 647 -HIAAYYNYKETVEILISFGADINVKDKYGRTALQYCS 683
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 15/172 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL N + ++E++ +T LH + N EIV+ LL N ++ ++ + +T L
Sbjct: 362 ELLISNGANIDEKDN-EGKTALHHAVIKNNKEIVEFLLSHGAN----IDGKDKFKKTSLF 416
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+N E ++L++HGA + K G T LH + +I VK L+ +A+
Sbjct: 417 YAAENNSKETVEILISHGANLNEKCEYGKTALHFATDNNIIE----IVKLLVLNDANLEE 472
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH-----SEEQRKRRALEACSETKAK 197
KD GKT L H + + ELL+ H ++Q R AL +E K
Sbjct: 473 KDLFGKTAL-HNAAHNNCKETAELLISHGANIDEKDQFGRTALHLAAEYNCK 523
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ SL E+ + + ++ +T LH A C E A+ LL HGA I+ K G T L+
Sbjct: 291 IPSLCEYFISHGANINGKDESRKTALHNATYYICKETAEFLLLHGANIDEKDQFGKTALN 350
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH-------------LSNGP---G 167
+ Y+ D V+ L+ A+ KDNEGKT L H LS+G G
Sbjct: 351 KAADYN----DKEIVELLISNGANIDEKDNEGKTALHHAVIKNNKEIVEFLLSHGANIDG 406
Query: 168 SAKLRELLLWHSEEQRKRRALEACSETKAKMDE 200
K ++ L+++ E + +E A ++E
Sbjct: 407 KDKFKKTSLFYAAENNSKETVEILISHGANLNE 439
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH + Y E + LL N ++ ++ +G+T L+ AA E +LL+++G
Sbjct: 313 KTALHNATYYICKETAEFLLLHGAN----IDEKDQFGKTALNKAADYNDKEIVELLISNG 368
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I+ K N G T LH +V + + V+ LL + A+ KD KT L + + S
Sbjct: 369 ANIDEKDNEGKTALHHAVIKNNKE----IVEFLLSHGANIDGKDKFKKTSLFYAAEN-NS 423
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 424 KETVEILISH 433
>gi|258515361|ref|YP_003191583.1| ATPase AAA [Desulfotomaculum acetoxidans DSM 771]
gi|257779066|gb|ACV62960.1| AAA ATPase central domain protein [Desulfotomaculum acetoxidans DSM
771]
Length = 322
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL+++VGL +K + + + + +RR+ L A P HM F GNPGTGKT VAR
Sbjct: 50 ELNSLVGLKCVKKLINEVYAFVEIQKRRQKEQL---ATEPLSLHMVFKGNPGTGKTTVAR 106
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
I+G+L +G+L + EV+R DLVGE++GHT +T+ ++ L I
Sbjct: 107 IIGKLFKELGVLSKGHLVEVERADLVGEYIGHTAQRTKEQIRKALGGI 154
>gi|404371809|ref|ZP_10977111.1| hypothetical protein CSBG_00892 [Clostridium sp. 7_2_43FAA]
gi|404301309|gb|EEH97266.2| hypothetical protein CSBG_00892 [Clostridium sp. 7_2_43FAA]
Length = 1124
Score = 77.8 bits (190), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L +I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 578 KASAKFD-LEEKLKDIIGLEEVKNLLRSQYKLLIAQEKRKSVGVNTEIEQNLNMVFAGNP 636
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ ++L +G+L ++ E R+ V G T KT + L +
Sbjct: 637 GTGKTSIARLVAQMLNSMGLLKIGQLVETDRSSFVSNVPGETAKKTEEKFKEALGGV 693
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 48/88 (54%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L +++G E K LR K M + ERRK LGL R ++ F G+ GTGK V
Sbjct: 855 DLEVRLKDLIGNEEAKEFLRNQYKLMRVKERRKRLGLSTDINRYMNIIFTGDIGTGKKTV 914
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLV 287
IL LY +G++ + ++ + +++
Sbjct: 915 LNILSETLYSMGVVKAKSIVDLSKEEII 942
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+DE+ +L +I+G+ +LK L + R+ LGL+ +R +M F GN GTGKT
Sbjct: 315 LDEVRYKLESIIGVKDLKEFLINIENNYKVQRIRERLGLRT-SRISLNMIFAGNAGTGKT 373
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI L +G+L EV + D + E V T +T
Sbjct: 374 NAARITYEYLNALGLLSKGVFVEVSKADFITENVNETAKRT 414
>gi|422316861|ref|ZP_16398237.1| hypothetical protein FPOG_01277 [Fusobacterium periodonticum D10]
gi|404590520|gb|EKA92909.1| hypothetical protein FPOG_01277 [Fusobacterium periodonticum D10]
Length = 363
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E E ++EL NEL+++VGL ++K ++ + + R+ L V + H+AF
Sbjct: 88 EKVEENPKGLEELLNELNSLVGLKDVKSKVNDLITYQKVQKLREKHKLHV-TKSTLHLAF 146
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GNPGTGKT VARI+GR+ +G+L EV RTDL+ + G T K ++ +
Sbjct: 147 TGNPGTGKTTVARIVGRIYKQIGLLSKGHFIEVSRTDLIAGYQGQTALKVKKVI 200
>gi|229827998|ref|ZP_04454067.1| hypothetical protein GCWU000342_00047 [Shuttleworthia satelles DSM
14600]
gi|229792592|gb|EEP28706.1| hypothetical protein GCWU000342_00047 [Shuttleworthia satelles DSM
14600]
Length = 480
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 182 QRKRRALEACSETKAKMDELENE----LSNIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
Q K + +E KAK +E E + L +VGL +K +++ + + + RK G+K
Sbjct: 126 QEKTKEMEGA---KAKQEEEETDPMEDLDALVGLESIKHDVKELYDFVKVQKMRKDAGMK 182
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
V A H+ F GNPGTGKT VARI+ RL +G+L ++ E R+ LV FVG T K
Sbjct: 183 V-APVSLHLVFSGNPGTGKTTVARIIARLYKQIGVLSKGQLVECDRSGLVAGFVGQTALK 241
Query: 298 TRRRV 302
T+ ++
Sbjct: 242 TQEKI 246
>gi|402072861|gb|EJT68542.1| hypothetical protein GGTG_13886 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 868
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A RLL + + + +N QTPLH +A Y+ E V LL G D ++A N + +T
Sbjct: 696 AVARLLVDQGADIEAKNDSR-QTPLHFTA-YSGQEAVARLLVDQGAD---IKATNEFQQT 750
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNAD 147
PLH+AA G +LL+ GA IEAK TPLHL+ +Y A + L+ AD
Sbjct: 751 PLHIAAMRGYEAVTRLLVDQGADIEAKDRRQQTPLHLAAYYGHE----AVARLLVGQGAD 806
Query: 148 CSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AK+ EG+TPL HL+ G + LL+
Sbjct: 807 IKAKNREGETPL-HLAAYKGHEAVARLLV 834
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 77/145 (53%), Gaps = 14/145 (9%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSA--GYNKAEIVKSLLEWPGND 74
+H A SG A RLL + + + N QTPLH++A GY E V LL G D
Sbjct: 719 LHFTAYSGQE-AVARLLVDQGADIKATNEFQ-QTPLHIAAMRGY---EAVTRLLVDQGAD 773
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
+EA++ +TPLH+AA G A+LL+ GA I+AK G TPLHL+ +
Sbjct: 774 ---IEAKDRRQQTPLHLAAYYGHEAVARLLVGQGADIKAKNREGETPLHLAAYKGHE--- 827
Query: 135 YATVKTLLEYNADCSAKDNEGKTPL 159
A + L++ AD AKD+ +TPL
Sbjct: 828 -AVARLLVDRGADIEAKDSLWQTPL 851
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
AF RLL EN + + + +Q L SA + V LL G D ++A+N +T
Sbjct: 631 AFTRLLLENGAGVEAKK---SQHELLRSAVKQGHKAVVRLLVDQGAD---IKAKNRERDT 684
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNAD 147
PLH+AA G A+LL+ GA IEAK ++ TPLH + + S A + L++ AD
Sbjct: 685 PLHLAAYKGHEAVARLLVDQGADIEAKNDSRQTPLHFTAY----SGQEAVARLLVDQGAD 740
Query: 148 CSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
A + +TPL H++ G + LL+
Sbjct: 741 IKATNEFQQTPL-HIAAMRGYEAVTRLLV 768
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH++A Y E V LL G D ++A+N GETPLH+AA G A+LL+ G
Sbjct: 782 QTPLHLAAYYGH-EAVARLLVGQGAD---IKAKNREGETPLHLAAYKGHEAVARLLVDRG 837
Query: 109 AFIEAKANNGMTPLHLS 125
A IEAK + TPL L+
Sbjct: 838 ADIEAKDSLWQTPLLLA 854
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G TPL A + GC +LLL +GA +EAK + H + +++ A V+ L++
Sbjct: 617 GYTPLWWAVEEGCEAFTRLLLENGAGVEAKKSQ-----HELLRSAVKQGHKAVVRLLVDQ 671
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AD AK+ E TPL HL+ G + LL+
Sbjct: 672 GADIKAKNRERDTPL-HLAAYKGHEAVARLLV 702
>gi|379707598|ref|YP_005262803.1| hypothetical protein NOCYR_1365 [Nocardia cyriacigeorgica GUH-2]
gi|374845097|emb|CCF62161.1| conserved protein of unknown function; ankyrin, ATPase and
coiled-coil domains [Nocardia cyriacigeorgica GUH-2]
Length = 584
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 190 ACSETKAKMDELENELSNI----VGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
A + KA+ + L + S++ +G+ +K Q+ + G+L+D+ R GL V ++ H
Sbjct: 285 AATAAKAERETLLTDASDLLNAQIGMASVKEQVDRLKSGVLMDQVRAKRGLAVESK-SQH 343
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+ F G PGTGKT +AR++ ++ +G++ V EV R D+VG +GHT PKT
Sbjct: 344 LIFSGPPGTGKTTIARVIAKIFAGLGVVQNAEVIEVSRNDMVGTHLGHTAPKT 396
>gi|357402946|ref|YP_004914871.1| ATPase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386359026|ref|YP_006057272.1| ATPase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337769355|emb|CCB78068.1| putative ATPase [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365809534|gb|AEW97750.1| ATPase [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 639
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVA 260
EL +VGL +K Q+R + + + R GL V +PP H F G GTGKT VA
Sbjct: 359 GELERMVGLEPVKRQVRALSAQLRMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVA 415
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
RILGR+ + +G+L D + E QR DLVGEF+G T K + L +
Sbjct: 416 RILGRVFFALGLLGGDHLVEAQRADLVGEFLGQTAVKANELIDSALGGV 464
>gi|336118847|ref|YP_004573619.1| ATPase [Microlunatus phosphovorus NM-1]
gi|334686631|dbj|BAK36216.1| putative ATPase [Microlunatus phosphovorus NM-1]
Length = 384
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
EA E + +DEL EL ++GLHE+K ++ + + ++ R GLK A H+ F
Sbjct: 73 EAEPEPEKTLDELLAELDALIGLHEVKAEIHRQVAVLRVEGLRTKAGLK-SATITRHLVF 131
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+GNPGTGKT VAR++G + +G+L ++ EV R++LV ++G T KT V
Sbjct: 132 VGNPGTGKTTVARLVGGIYRALGLLTKGQLVEVDRSELVAGYLGQTAIKTAEVV 185
>gi|428297482|ref|YP_007135788.1| AAA ATPase [Calothrix sp. PCC 6303]
gi|428234026|gb|AFY99815.1| AAA ATPase central domain protein [Calothrix sp. PCC 6303]
Length = 306
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
S + +D L+ +++VGL +K ++++ A +L+D+ R ++GL G P HM FLG
Sbjct: 21 SHIQEILDRLD---ADLVGLKSVKNKIKEMAALLLVDKVRHSVGLTAGV--PTLHMTFLG 75
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
NPG GKT VA + +LY +G + + V V R DLVG+ +G T PKTR
Sbjct: 76 NPGMGKTTVAMRMAEILYRLGYITRENVMLVTRDDLVGQGMGQTAPKTR 124
>gi|269794581|ref|YP_003314036.1| AAA+ family ATPase [Sanguibacter keddieii DSM 10542]
gi|269096766|gb|ACZ21202.1| AAA+ family ATPase [Sanguibacter keddieii DSM 10542]
Length = 681
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E + ++ + + EL+ +VGL +K Q+R+ D R G+ R H+ F
Sbjct: 394 ETLAPDAVEIGDPQAELAALVGLAPVKTQVRRLEAEARADRLRAEAGMPDSGRSR-HLVF 452
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
GNPGT KT VAR+L R +G+L + EV R DLVGE++G T PK R+
Sbjct: 453 TGNPGTAKTTVARLLARTYAQLGLLSRGHLVEVSRMDLVGEYIGQTAPKVRK 504
>gi|170747873|ref|YP_001754133.1| ATPase central domain-containing protein [Methylobacterium
radiotolerans JCM 2831]
gi|170654395|gb|ACB23450.1| AAA ATPase central domain protein [Methylobacterium radiotolerans
JCM 2831]
Length = 653
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
++A + A++D + +GL +K Q++ A +L+D RR+A G++VGA HM
Sbjct: 373 MDAARKVMARLDAM-------IGLAPVKEQVKTVAARVLVDARRRAEGIEVGAV-SQHMV 424
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLS 307
F G PG GKT VARI+G + +G+L V EV R LV +VG T KT R L
Sbjct: 425 FTGPPGVGKTEVARIMGDIFRTLGVLRKGHVVEVDRAGLVAGYVGQTAAKTLERCREALD 484
Query: 308 EITCL 312
I +
Sbjct: 485 GILFI 489
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A +E K + L +VGL +K++++ M ++++R+A L V A HM F
Sbjct: 91 AAAEKKDLLATALATLDGMVGLDPVKLEVKGVIARMQVEQQRRAQNLPVAAM-SQHMVFT 149
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
G PG GKT VAR+LG + + +L + EV R LV + G T KT R L I
Sbjct: 150 GPPGVGKTEVARVLGSVFKALKVLRKGHLVEVDRAGLVAGYAGQTAIKTLERCREALDGI 209
Query: 310 TCL 312
+
Sbjct: 210 LFI 212
>gi|317506392|ref|ZP_07964200.1| ATPase [Segniliparus rugosus ATCC BAA-974]
gi|316255308|gb|EFV14570.1| ATPase [Segniliparus rugosus ATCC BAA-974]
Length = 373
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +L +GL E+K Q+ + + + RR+ GL VG +R H+ F G PGTGKT +
Sbjct: 81 EAEQQLGEFIGLDEVKDQVARLKSSVAMALRRQERGLAVG-QRAHHLVFAGPPGTGKTTI 139
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + V EV R DL+G+ +G T KT + L + L
Sbjct: 140 ARVVAKIYCGLGLLKREHVREVHRADLIGQHIGETEAKTNAVIDSALDGVLFL 192
>gi|414145861|pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
gi|414145862|pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 88/156 (56%), Gaps = 11/156 (7%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++G+ + L+ EN + +N + +TPLH +A EIVK L+ + ++
Sbjct: 11 AAENGNKDRVKDLI-ENGADVNASDS-DGRTPLHYAAKEGHKEIVKLLI----SKGADVN 64
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G TPLH AAK G E KLL++ GA + AK ++G TPLH Y+ + VK
Sbjct: 65 AKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLH----YAAKEGHKEIVK 120
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
L+ AD + D++G+TPLD L+ G+ ++ +LL
Sbjct: 121 LLISKGADVNTSDSDGRTPLD-LAREHGNEEIVKLL 155
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 9/113 (7%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK L+E + ++ A + G TPLH AAK G E KLL++ GA + AK ++G TPLH
Sbjct: 20 VKDLIE----NGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLH 75
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
Y+ + VK L+ AD +AKD++G+TPL H + G ++ +LL+
Sbjct: 76 ----YAAKEGHKEIVKLLISKGADVNAKDSDGRTPL-HYAAKEGHKEIVKLLI 123
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+NG + K L+ +GA + A ++G TPLH Y+ + VK L+ AD +AK
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLH----YAAKEGHKEIVKLLISKGADVNAK 66
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D++G+TPL H + G ++ +LL+
Sbjct: 67 DSDGRTPL-HYAAKEGHKEIVKLLI 90
>gi|390576812|ref|ZP_10256858.1| protein CbbX [Burkholderia terrae BS001]
gi|389931236|gb|EIM93318.1| protein CbbX [Burkholderia terrae BS001]
Length = 303
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HM 246
L + S T + +L+ EL +GL +K ++R A +L+D+ R A GL G P HM
Sbjct: 19 LLSSSGTVELLAQLDREL---IGLAPVKSRIRDVAALLLVDKLRAARGLSAGT--PSLHM 73
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT P+T+
Sbjct: 74 CFTGNPGTGKTTVAMRMAAILHQLGYVRKGHLVAVTRDDLVGQYIGHTAPRTK 126
>gi|89902004|ref|YP_524475.1| AAA ATPase [Rhodoferax ferrireducens T118]
gi|89346741|gb|ABD70944.1| AAA ATPase [Rhodoferax ferrireducens T118]
Length = 839
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 57/99 (57%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
LE + VGL ++ ++ + A + + + R GL+V H+ F+GNPGTGKT +A
Sbjct: 278 LETAFAGFVGLDVVREEVFRQASYIQVQKLRAQQGLRVPTAPSRHLVFIGNPGTGKTTIA 337
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
RI+ L +GIL TD+V E R LV ++G T KTR
Sbjct: 338 RIIAGLYQRLGILKTDKVVETDRAGLVAPYIGQTALKTR 376
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+++ GL +K Q+++ + + + R G +V A H+ F GNPGTGKT+V+RI+
Sbjct: 566 LNDLAGLGRVKKQVQRLSDFVRIQHARAEAGSRVAAGFSQHLVFTGNPGTGKTVVSRIIA 625
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ + +GI ++ + EV R LV +VG + KTR
Sbjct: 626 DIYFSLGITLSNHIVEVDRAGLVAGYVGQSAIKTR 660
>gi|299472954|emb|CBN77355.1| cbbX protein [Ectocarpus siliculosus]
Length = 424
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKT 257
D LE S++VGL +K+++R+ A ++LD+ R LG P HM F G PGTGKT
Sbjct: 134 DILEKLDSDLVGLIPVKLRVRQIAALLVLDKMRGKLGFDTSV--PSLHMCFTGAPGTGKT 191
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA +G++L +G V R DLVG++VGHT PKT+ +
Sbjct: 192 TVALRMGQILQRMGYCRQGHVVVATRDDLVGQYVGHTAPKTKEMI 236
>gi|118410970|ref|YP_874365.1| Rubisco expression protein [Phaeodactylum tricornutum]
gi|116739717|gb|ABK20588.1| Rubisco expression protein [Phaeodactylum tricornutum]
Length = 290
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLL 267
+VGL +K ++R+ A +L+D+ R+ LG+ A HM+F G+PGTGKT V + +L
Sbjct: 28 LVGLAPVKTRIREVAALLLIDKLRRNLGI-TSAHPGLHMSFTGSPGTGKTTVGLKMAEIL 86
Query: 268 YMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
Y +G + + V R DLVG+++GHT PKT+
Sbjct: 87 YQLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 118
>gi|367478431|ref|ZP_09477742.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. ORS 285]
gi|365269316|emb|CCD90210.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. ORS 285]
Length = 314
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ E +++L+ EL VGL +K ++R+ A ++++ R+ +GL A P
Sbjct: 20 RREFESV-EIAPVLEQLDREL---VGLAPVKTRIREIASLLMMERIRRKMGL---ATTFP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 129
>gi|408789914|ref|ZP_11201553.1| stage V sporulation protein K [Lactobacillus florum 2F]
gi|408520816|gb|EKK20843.1| stage V sporulation protein K [Lactobacillus florum 2F]
Length = 452
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL+++ GL E K Q+ +++ R+ GLK HM F+GNPGTGKT VA++
Sbjct: 185 ELNDLTGLEEAKKQIIDMIAIAKMNQLREKHGLKTPTGISKHMVFVGNPGTGKTTVAKLF 244
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+L+ GI+ +++ R+DLVG + G T +T+R +
Sbjct: 245 AAILFQNGIISDNKLVNTDRSDLVGHYTGTTADRTKRVI 283
>gi|397691467|ref|YP_006528721.1| AAA family ATPase [Melioribacter roseus P3M]
gi|395812959|gb|AFN75708.1| AAA family ATPase [Melioribacter roseus P3M]
Length = 1292
Score = 77.4 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 57/96 (59%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRL 266
+ +GL +K +R + + + RK GLK + FLGNPGTGKT +AR++G +
Sbjct: 460 SFIGLKNIKQTVRDFITYLEFIKERKKYGLKSEENIAINAVFLGNPGTGKTTIARLIGNI 519
Query: 267 LYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
L +GILP+ V EV R LVG+++G T KT + +
Sbjct: 520 LRAMGILPSGHVVEVDRAALVGQYIGETAQKTEKVI 555
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ E +EL N+VGL +K ++ + K L G + + H FLGNPGTGKT
Sbjct: 740 LSEALDELDNLVGLAGVKKEINELVK---LARFFAEEGENLTEKFSDHYLFLGNPGTGKT 796
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ ++ +GIL + E R LV +VG T KT+
Sbjct: 797 TVARLFSKIFSALGILSKGHLVETDRQGLVAGYVGQTAEKTK 838
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
K+ E +EL+++VGL +K + K G + + ++ GL V + + F+GN GTGK
Sbjct: 1026 KLQEYMDELNSLVGLENVKEGILKLISGSKIAQLKREKGLHV-IEKNLNTIFIGNDGTGK 1084
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
T VA++ G +L +GIL + +V+R DLV F T
Sbjct: 1085 TTVAKLFGNILRELGILSKGHLVKVERADLVRNFQDST 1122
>gi|345854505|ref|ZP_08807329.1| ATPase AAA [Streptomyces zinciresistens K42]
gi|345634034|gb|EGX55717.1| ATPase AAA [Streptomyces zinciresistens K42]
Length = 545
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E A +DE EL +VGL +K Q+R + + + R+ G A P H+ F G P
Sbjct: 254 ERSALLDEAMAELDGMVGLTPVKRQVRSLSAQLRMAAVRRGQG-PAAAPAPQHLVFTGPP 312
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKT VAR++G++ +G+L V E QR DLVG+ +G T KT
Sbjct: 313 GTGKTTVARVVGKVFAGLGLLDRGHVVEAQRVDLVGQHLGETAVKT 358
>gi|292493419|ref|YP_003528858.1| CbbX protein [Nitrosococcus halophilus Nc4]
gi|291582014|gb|ADE16471.1| CbbX protein [Nitrosococcus halophilus Nc4]
Length = 317
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S + +D+L+ EL +GL +K ++R+ A +L+D R+ L + P HM+F
Sbjct: 30 ASNIQEVLDKLDREL---IGLKPIKTRIREIAALLLVDRLRRQFELT--SETPTLHMSFT 84
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA +G +L +G + + V R DLVG+++GHT PKT+
Sbjct: 85 GNPGTGKTTVALRMGEILKRLGYVREGHLVTVTRDDLVGQYIGHTAPKTK 134
>gi|123488226|ref|XP_001325121.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121908015|gb|EAY12898.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 407
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 8/113 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
T LH +A N E+ + LL G D + A+++ G+TPLHMAA+N E A+LL+ HG
Sbjct: 247 STALHDAAHSNSKEVAE-LLILHGAD---INAEDINGKTPLHMAARNNSKETAELLILHG 302
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
A I AK +G T LH W +I S+D T + L+ + AD +AKD +G+TPL H
Sbjct: 303 ADINAKDKDGYTALH---WAAI-SKDKETAELLVMHGADGNAKDEDGETPLHH 351
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QT LH++A YN E + L+ N + A+ YG T LH+AA N E A++L++HG
Sbjct: 129 QTALHIAAEYNSKETAEILISNGAN----INAKMSYGRTALHIAADNNSIEIAEILISHG 184
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
A I K N+G L +Y+I V+ L+ + A
Sbjct: 185 ADINEKDNDGDDAL----YYAIHDNSKEMVEFLIFHGA 218
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 12/148 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+ LH +A N EI + L+ ++ +++ +T LH+AA+ E A++L+++G
Sbjct: 96 KNALHNAACRNIKEITELLISHGA----DVNSKDKDKQTALHIAAEYNSKETAEILISNG 151
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK + G T LH++ + + L+ + AD + KDN+G L + + S
Sbjct: 152 ANINAKMSYGRTALHIAA----DNNSIEIAEILISHGADINEKDNDGDDAL-YYAIHDNS 206
Query: 169 AKLRELLLWHS---EEQRKRRALEACSE 193
++ E L++H K+ A + C E
Sbjct: 207 KEMVEFLIFHGAIISTHLKKAASQNCKE 234
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSE 133
A++ GETPLH A + + KLL++HGA I AK+ G TPL+ S R E
Sbjct: 340 AKDEDGETPLHHAVFHEVEKIIKLLISHGADINAKSKFGHTPLYYSTGKYARYE 393
>gi|123450148|ref|XP_001313709.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121895602|gb|EAY00780.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 359
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 82/150 (54%), Gaps = 10/150 (6%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ + QT LH++A +N E + L+ N + ++ G+T LH+AA + E
Sbjct: 52 VNEKDNIE-QTALHIAASHNSKETAEFLISHGAN----VNEKDNNGQTALHIAASHNSKE 106
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ L++HGA + K NNG T LH++ ++ + T + L+ + A+ + KDN G+T L
Sbjct: 107 TAEFLISHGANVNEKDNNGQTALHIAASHNSKE----TAEFLISHGANVNEKDNNGQTAL 162
Query: 160 DHLSNGPGSAKLRELLLWHSEEQRKRRALE 189
H++ S + E L+ H ++ +E
Sbjct: 163 -HIAASHNSKETAEFLISHGANVNEKDNIE 191
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ + QT LH++A +N E + L+ N + ++ G+T LH+AA + E
Sbjct: 217 VNEKDNIE-QTALHIAASHNSKETAEFLISHGAN----VNEKDNNGQTALHIAASHNSKE 271
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ L++HGA + K NNG T LH++ ++ + T + L+ + A+ + KDN G+T L
Sbjct: 272 TAEFLISHGANVNEKDNNGQTALHIAASHNSKE----TAEFLISHGANVNEKDNNGQTAL 327
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ S + E L+ H
Sbjct: 328 -HIAASHNSKETAEFLISH 345
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QT LH++A +N E + L+ N + ++ G+T LH+AA + E A+ L++HG
Sbjct: 126 QTALHIAASHNSKETAEFLISHGAN----VNEKDNNGQTALHIAASHNSKETAEFLISHG 181
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + K N T LH++ ++ + T + L+ + A+ + KDN +T L H++ S
Sbjct: 182 ANVNEKDNIEQTALHIAASHNSKE----TAEFLISHGANVNEKDNIEQTAL-HIAASHNS 236
Query: 169 AKLRELLLWH 178
+ E L+ H
Sbjct: 237 KETAEFLISH 246
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
++ +++ G T LH A N EAA+ L++HGA + K N T LH++ ++ + T
Sbjct: 19 IKVKDINGRTALHYVALNNSKEAAEFLISHGANVNEKDNIEQTALHIAASHNSKE----T 74
Query: 138 VKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ L+ + A+ + KDN G+T L H++ S + E L+ H
Sbjct: 75 AEFLISHGANVNEKDNNGQTAL-HIAASHNSKETAEFLISH 114
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QT LH++A +N E + L+ N + ++ G+T LH+AA + E A+ L++HG
Sbjct: 291 QTALHIAASHNSKETAEFLISHGAN----VNEKDNNGQTALHIAASHNSKETAEFLISHG 346
Query: 109 AFIEAKANNGMTPL 122
A + K + G T L
Sbjct: 347 ANVNEK-DEGKTAL 359
>gi|448926450|gb|AGE50027.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus Can18-4]
Length = 292
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LLE
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLLE----HGA 55
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 56 RIDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D + L+E+ AD SAKD++G TPL
Sbjct: 111 --ASDGDVARMLIEHGADISAKDSDGCTPL 138
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 30/146 (20%)
Query: 50 TPLHVSAGYNKAEIVK--------------SLLEWPGNDKV---------ELEAQNMYGE 86
TPLH+++ + A ++ + L W GN + ++ A++ +G
Sbjct: 106 TPLHIASDGDVARMLIEHGADISAKDSDGCTPLYWAGNKCIARLLTAHGSDVSAKDRHGY 165
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH A + G + A++LL H + A+ +G TPLH++ S R Y V+ LLE+ A
Sbjct: 166 TPLHHA-RTG--DIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRVLLEHGA 218
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLR 172
D AKDN+G+ P +H S LR
Sbjct: 219 DIRAKDNDGRMPFEHWDPKQRSQFLR 244
>gi|229822062|ref|YP_002883588.1| ATPase AAA [Beutenbergia cavernae DSM 12333]
gi|229567975|gb|ACQ81826.1| AAA ATPase central domain protein [Beutenbergia cavernae DSM 12333]
Length = 678
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
+ +L+ ++GL +K Q+R+ A D R+ G+ R H+ F+GNPGT KT VAR
Sbjct: 405 QADLAELIGLDPIKEQVRRLAAEARADVLRREAGMPDPGRSR-HLVFVGNPGTAKTTVAR 463
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
IL R+ +G L + E R DLVGE++G T PK R+
Sbjct: 464 ILARIYAQLGTLERGHLVEASRMDLVGEYIGQTAPKVRK 502
>gi|383827143|ref|ZP_09982256.1| ATPase AAA [Mycobacterium xenopi RIVM700367]
gi|383331276|gb|EID09777.1| ATPase AAA [Mycobacterium xenopi RIVM700367]
Length = 613
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
EA + + E E EL +GL ++K Q+ + + ++ RK GL+V A+R H+ F
Sbjct: 307 EAKERKRVLLAEAERELDEFIGLDKVKDQVARLKSAVAMEVVRKQRGLEV-AQRTHHLVF 365
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 366 AGPPGTGKTTIARVIAKIYCGLGLLKKENIREVHRADLIGQHIGETEAKTNAIIDSALDG 425
Query: 309 ITCL 312
+ L
Sbjct: 426 VLFL 429
>gi|456391745|gb|EMF57105.1| CbbX protein [Streptomyces bottropensis ATCC 25435]
Length = 342
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 63/105 (60%), Gaps = 7/105 (6%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
+VGL +K ++R+ A +L+D +R GL A RP HM F G+PGTGKT VA +
Sbjct: 67 QLVGLTPVKTRIREIAALLLVDRQRARFGLS--ASRPNLHMCFTGSPGTGKTTVALRMAE 124
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRRVGHLL 306
LL +G L + V R DLVG++VGHT PKT +R +G LL
Sbjct: 125 LLKQLGYLKRGHLVSVTRDDLVGQYVGHTAPKTKEVLKRAMGGLL 169
>gi|374609193|ref|ZP_09681990.1| CbbX protein [Mycobacterium tusciae JS617]
gi|373552933|gb|EHP79536.1| CbbX protein [Mycobacterium tusciae JS617]
Length = 346
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 167 GSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGML 226
G + + E L ++ AL S T + L+ EL VGL +K ++ + A +L
Sbjct: 27 GESDVPERELLPADAMVDLAALRRESGTDDVLRALDAEL---VGLEPVKTRIAEIAALLL 83
Query: 227 LDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTD 285
+D+ R G V A +P HM+F GNPGTGKT VA + LL+ +G L + V R D
Sbjct: 84 VDKMRARFG--VTAPQPTLHMSFTGNPGTGKTTVAMRMADLLHRLGYLRRGHLVSVTRDD 141
Query: 286 LVGEFVGHTGPKTR 299
LVGE+VGHT PKT+
Sbjct: 142 LVGEYVGHTAPKTK 155
>gi|326803540|ref|YP_004321358.1| putative stage V sporulation protein K [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651461|gb|AEA01644.1| putative stage V sporulation protein K [Aerococcus urinae
ACS-120-V-Col10a]
Length = 744
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG--ARRPPHMAFLGNPGTGKTMVARI 262
L+ ++GL ++K Q+ ++ L+ RR+ + G A+ H FLGNPGTGKT VARI
Sbjct: 490 LNELIGLAKVKKQISEFVHLAELNRRREE---ENGGEAKFTLHSLFLGNPGTGKTTVARI 546
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LG + Y GI+ + EV R+DLV +VG T KTR
Sbjct: 547 LGEIFYQKGIIAQKKFIEVSRSDLVAGYVGQTALKTR 583
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 175 LLWHSEEQRKRRALEACSETKAKMDELENE-LSNIVGLHELKIQLRKWAKGMLLDERRKA 233
LL +E R+ + + + + ++ E L+N+VGL ++K ++ K + + ++ R A
Sbjct: 183 LLAEKQEIRENKQVSQNQDEAERTPQVSMEKLNNLVGLTKVKEEIHKMIRMVEFNKHRIA 242
Query: 234 LGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRV--TEVQRTDLVGEFV 291
GLK + H F+GNPGTGKT +ARILG +L+ GI D++ EV+ DL+ +V
Sbjct: 243 QGLK-PQKVVLHSVFMGNPGTGKTTLARILGEVLFDYGIFKGDKLKFIEVKEADLISGYV 301
Query: 292 GHTGPKTR 299
G T +T+
Sbjct: 302 GQTAIQTQ 309
>gi|99035938|ref|ZP_01314984.1| hypothetical protein Wendoof_01000169 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 536
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ A+ + +TPLH+AA G + K L+A GA
Sbjct: 378 TPLHIAAEKNHIEVVKILVE-----KADVNAEGIEDKTPLHLAAAKGHEDVVKTLIAKGA 432
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK + TPLHL+ ++ VK LLE AD S KD +GKTP D L+ G
Sbjct: 433 KVKAKNGDRRTPLHLAA----KNGHEGIVKVLLEAGADPSLKDVDGKTPRD-LTKDQGII 487
Query: 170 KLRE 173
+L E
Sbjct: 488 QLLE 491
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A ++VK+L+ N + A+ + ETPLH+AA+ G + +L+A GA
Sbjct: 312 TPLHLAAREGCEDVVKTLIAKGAN----VNAEGIVDETPLHLAARGGHKDVVDILIAKGA 367
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ N TPLH++ +++ V +L AD +A+ E KTPL HL+ G
Sbjct: 368 KVNAQNNKRYTPLHIAA-----EKNHIEVVKILVEKADVNAEGIEDKTPL-HLAAAKGHE 421
Query: 170 KLRELLL 176
+ + L+
Sbjct: 422 DVVKTLI 428
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 58 YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN 117
+N E VK+LL N V + A++ G TPLH+AA+ GC + K L+A GA + A+
Sbjct: 287 HNNEEEVKNLL----NKGVNVNAKDDDGCTPLHLAAREGCEDVVKTLIAKGANVNAEGIV 342
Query: 118 GMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
TPLHL+ R V L+ A +A++N+ TPL
Sbjct: 343 DETPLHLAA----RGGHKDVVDILIAKGAKVNAQNNKRYTPL 380
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ +N A + K+L+E + ++ A++ TPLH+AA G + +L GA +
Sbjct: 90 LHLASYWNCANVAKALIE----NGADINAEHDNKITPLHIAAHYGHEDVVTILTGKGAIV 145
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+AK +G T LH +++ V TL+ A+ +A++++G PL HL+ G ++
Sbjct: 146 DAKNGDGWTSLH----FAVEKNHENVVNTLIGKGANVNAENDKGWAPL-HLAITNGHKEI 200
Query: 172 RELL 175
++L
Sbjct: 201 VQVL 204
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++ EIV+ L + G + ++A+N G TPLH+AA NG + + L+ GA
Sbjct: 188 PLHLAITNGHKEIVQVLSKAEG---INVDAKNSDGWTPLHLAAANGREDIVETLIEKGAD 244
Query: 111 IEAKANNGMTPLHL---------------------SVWYSIRSEDYATVKTLLEYNADCS 149
+ AK + TPL ++ +++ + VK LL + +
Sbjct: 245 VNAKDHYKWTPLTFASQKGHEVVKGALLKAQENIKALLSAVKHNNEEEVKNLLNKGVNVN 304
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLL 176
AKD++G TPL HL+ G + + L+
Sbjct: 305 AKDDDGCTPL-HLAAREGCEDVVKTLI 330
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 34/140 (24%)
Query: 50 TPLHVSAGYNKAEIVK------SLLEWPGND-------KVE----------------LEA 80
TPLH++A Y ++V ++++ D VE + A
Sbjct: 121 TPLHIAAHYGHEDVVTILTGKGAIVDAKNGDGWTSLHFAVEKNHENVVNTLIGKGANVNA 180
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
+N G PLH+A NG E ++L A G ++AK ++G TPLHL+ ED V+
Sbjct: 181 ENDKGWAPLHLAITNGHKEIVQVLSKAEGINVDAKNSDGWTPLHLAAANG--REDI--VE 236
Query: 140 TLLEYNADCSAKDNEGKTPL 159
TL+E AD +AKD+ TPL
Sbjct: 237 TLIEKGADVNAKDHYKWTPL 256
>gi|358387519|gb|EHK25113.1| hypothetical protein TRIVIDRAFT_143504 [Trichoderma virens Gv29-8]
Length = 1258
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 10/166 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G L Q LL +N +N + + TPLHV++ K E V+ LL ++ +
Sbjct: 1074 LHFAACHGHLKVIQLLLSQNNIEINSEDQELL-TPLHVASRSGKHEAVQLLL---NHNSI 1129
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF-IEAKANNGMTPLHLSVWYSIRSEDY 135
+ + +++ G+TPLH A++NG E KLLL+ I++K +G TP+H ++ R+ +
Sbjct: 1130 DTDVKDIDGQTPLHWASENGHFEVMKLLLSKTTVNIDSKTIHGWTPIH----HASRNGFF 1185
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
VK LLE+ A +A+ N TPL H+++ G L LL+ H E
Sbjct: 1186 RVVKLLLEHGAAVNARTNHHTTPL-HMASCHGHYGLVRLLIEHGAE 1230
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++SG A Q LL N S+ + + QTPLH ++ E++K LL V
Sbjct: 1108 LHVASRSGKHEAVQLLLNHN-SIDTDVKDIDGQTPLHWASENGHFEVMKLLL---SKTTV 1163
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++++ ++G TP+H A++NG KLLL HGA + A+ N+ TPLH++ + Y
Sbjct: 1164 NIDSKTIHGWTPIHHASRNGFFRVVKLLLEHGAAVNARTNHHTTPLHMASCHG----HYG 1219
Query: 137 TVKTLLEYNADCSAKDNEGKTP 158
V+ L+E+ A+ ++ + G TP
Sbjct: 1220 LVRLLIEHGAEMNSVEINGFTP 1241
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 39/199 (19%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R++ P I + G L QRLL + +N +N ++ LH + Y +IV+ LL
Sbjct: 967 RASTPLMI--ASTYGHLQIVQRLLVQKDIHINLKNQ-KGRSALHSAVAYGYTQIVQLLL- 1022
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH-GAFIEAKANNGMTPLHLSVWY 128
+ + ++ G TPLH A++ + +LL+ G + AK N+G TPLH + +
Sbjct: 1023 --SQKDININTRDEDGWTPLHPASEYSYLQIVRLLVDQKGINVNAKGNDGWTPLHFAACH 1080
Query: 129 ---------------SIRSED---------------YATVKTLLEYNA-DCSAKDNEGKT 157
I SED + V+ LL +N+ D KD +G+T
Sbjct: 1081 GHLKVIQLLLSQNNIEINSEDQELLTPLHVASRSGKHEAVQLLLNHNSIDTDVKDIDGQT 1140
Query: 158 PLDHLSNGPGSAKLRELLL 176
PL H ++ G ++ +LLL
Sbjct: 1141 PL-HWASENGHFEVMKLLL 1158
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL-AHG 108
T LH++A + EI+ P ND+ E +A + +G TPL AA +G + KLLL H
Sbjct: 837 TGLHLAAHFGIIEIIG----IPFNDQ-EPDAGDDFGRTPLSYAAGSGHDAVVKLLLRQHN 891
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
++ NG TPL +W + R A + LL + ++++ +G++ L L++ G
Sbjct: 892 VNPNSQDKNGQTPL---MWAAKRGH-LAVAELLLMADGHINSENKDGESSL-FLASRHGH 946
Query: 169 AKLRELLL 176
++ ++LL
Sbjct: 947 QEIVDILL 954
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +++G + LL + ++ + + TP+H ++ +VK LLE
Sbjct: 1142 LHWASENGHFEVMKLLLSKTTVNIDSKT-IHGWTPIHHASRNGFFRVVKLLLE----HGA 1196
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
+ A+ + TPLHMA+ +G +LL+ HGA + + NG TP +++
Sbjct: 1197 AVNARTNHHTTPLHMASCHGHYGLVRLLIEHGAEMNSVEINGFTPKQMAL 1246
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
+TPL +AG +VK LL V +Q+ G+TPL AAK G A+LLL
Sbjct: 866 FGRTPLSYAAGSGHDAVVKLLLR---QHNVNPNSQDKNGQTPLMWAAKRGHLAVAELLLM 922
Query: 107 HGAFIEAKANNGMTPLHLS 125
I ++ +G + L L+
Sbjct: 923 ADGHINSENKDGESSLFLA 941
>gi|18310529|ref|NP_562463.1| stage V sporulation protein K [Clostridium perfringens str. 13]
gi|18145210|dbj|BAB81253.1| stage V sporulation protein K [Clostridium perfringens str. 13]
Length = 1145
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 593 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 651
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 652 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 708
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 330 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 388
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 389 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 429
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L+N++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 870 DLEKKLNNLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 929
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 930 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 958
>gi|422874467|ref|ZP_16920952.1| stage V sporulation protein K [Clostridium perfringens F262]
gi|380304540|gb|EIA16828.1| stage V sporulation protein K [Clostridium perfringens F262]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|422346214|ref|ZP_16427128.1| hypothetical protein HMPREF9476_01201 [Clostridium perfringens
WAL-14572]
gi|373226836|gb|EHP49158.1| hypothetical protein HMPREF9476_01201 [Clostridium perfringens
WAL-14572]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKRLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + V
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFVA 946
>gi|182420519|ref|ZP_02643334.2| putative sporulation protein [Clostridium perfringens NCTC 8239]
gi|182380231|gb|EDT77710.1| putative sporulation protein [Clostridium perfringens NCTC 8239]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|182624721|ref|ZP_02952502.1| putative sporulation protein [Clostridium perfringens D str.
JGS1721]
gi|177910118|gb|EDT72512.1| putative sporulation protein [Clostridium perfringens D str.
JGS1721]
Length = 1157
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 605 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 663
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 664 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 720
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 342 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 400
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 401 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 441
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 882 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 941
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 942 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 970
>gi|170764246|ref|ZP_02639141.2| putative sporulation protein [Clostridium perfringens CPE str.
F4969]
gi|170714884|gb|EDT27066.1| putative sporulation protein [Clostridium perfringens CPE str.
F4969]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LTIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|170763906|ref|ZP_02635005.2| putative sporulation protein [Clostridium perfringens B str. ATCC
3626]
gi|170712444|gb|EDT24626.1| putative sporulation protein [Clostridium perfringens B str. ATCC
3626]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|169342803|ref|ZP_02863837.1| putative sporulation protein [Clostridium perfringens C str.
JGS1495]
gi|169299060|gb|EDS81132.1| putative sporulation protein [Clostridium perfringens C str.
JGS1495]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|168206773|ref|ZP_02632778.1| putative sporulation protein [Clostridium perfringens E str.
JGS1987]
gi|170661780|gb|EDT14463.1| putative sporulation protein [Clostridium perfringens E str.
JGS1987]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTARRT 417
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|110801566|ref|YP_698835.1| spoVK domain-containing protein [Clostridium perfringens SM101]
gi|110682067|gb|ABG85437.1| spoVK domain protein [Clostridium perfringens SM101]
Length = 1133
Score = 77.4 bits (189), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
+ AK D LE +L I+GL E+K LR K ++ E+RK++G+ + +M F GNP
Sbjct: 581 KVSAKFD-LEEKLKEIIGLEEVKEFLRSQYKLIVAQEKRKSVGVNTKIEQNLNMIFAGNP 639
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT +AR++ +L +G+L ++ E R+ V + G T KT + L +
Sbjct: 640 GTGKTSIARLVAEMLNSMGLLKVGQLVETDRSSFVSDIPGETSKKTEEKFKEALGGV 696
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E+ +L +I+G+ ELK + K + + R+ LGLK + +M F GN GTGKT
Sbjct: 318 LEEVRYKLESIIGMKELKEFIDKIENNFKVQKIREKLGLKT-TQISLNMIFAGNAGTGKT 376
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI LY +G++ + EV + D +GE + +T +T
Sbjct: 377 NAARITFEYLYALGMIKENIFKEVSKADFIGEGISNTVRRT 417
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+LE +L++++G ELK LR K M + E+RK LG +V + +M F G GTGK V
Sbjct: 858 DLEKKLNDLIGNEELKDFLRGQYKLMKIREKRKKLGFQVDLNKYMNMVFTGESGTGKKTV 917
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVG 288
I +LY +GI+ + ++ + + +
Sbjct: 918 LNIYSEMLYSMGIIKAKNIVQIDKYEFMA 946
>gi|393788006|ref|ZP_10376137.1| hypothetical protein HMPREF1068_02417 [Bacteroides nordii
CL02T12C05]
gi|392656219|gb|EIY49858.1| hypothetical protein HMPREF1068_02417 [Bacteroides nordii
CL02T12C05]
Length = 712
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
DE +L+ +VGL ++K + + K + +ERRK LGL V HM F GNPGTGKT
Sbjct: 420 FDESMKQLNALVGLSKVKQNMEQAFKFVRFNERRKQLGLPVQGPGAHHMIFTGNPGTGKT 479
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
VA+++G++ + +G L V R+ LVG F+G T
Sbjct: 480 TVAKMVGKIYHALGQLSKGEVIVTGRSQLVGRFIGET 516
>gi|82799284|gb|ABB92210.1| RuBisCO-expression protein [uncultured marine type-A Synechococcus
5B2]
Length = 302
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMV 259
LE +++GL +K ++R+ A +L+D+ R+ L L A P HM+F G+PGTGKT V
Sbjct: 20 LEQLDRDLIGLAPVKTRIREIAALLLVDQARQQLELPSTA--PSLHMSFTGHPGTGKTTV 77
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
A+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 78 AQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|384569028|gb|AFI09259.1| LmrCD-specific DARPin, partial [synthetic construct]
Length = 169
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + QTPLH++A EIV+ LL+ ++ A + G TPLH
Sbjct: 31 RILMANGADVNADDN-WGQTPLHLAARTGHLEIVEVLLKHG----ADVNAMDWLGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+ G E ++LL HGA + A+ N G TPLHL+ V+ LL+Y AD +
Sbjct: 86 LAAQYGHLEIVEVLLKHGADVNAQDNLGFTPLHLAANIG----HLEIVEVLLKYGADVNV 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + +G+TPLH+AA+ G E ++LL HGA + A G TPLHL+ Y
Sbjct: 39 DVNADDNWGQTPLHLAARTGHLEIVEVLLKHGADVNAMDWLGSTPLHLAAQYG----HLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL++ AD +A+DN G TPL HL+ G ++ E+LL
Sbjct: 95 IVEVLLKHGADVNAQDNLGFTPL-HLAANIGHLEIVEVLL 133
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A N G TPLHL+ R+ V+ LL++ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNADDNWGQTPLHLAA----RTGHLEIVEVLLKHGADVNAM 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRAL 188
D G TPL HL+ G ++ E+LL H + + L
Sbjct: 77 DWLGSTPL-HLAAQYGHLEIVEVLLKHGADVNAQDNL 112
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++G L + LL+ + + TPLH++A Y EIV+ LL+
Sbjct: 51 LHLAARTGHLEIVEVLLKHGADV--NAMDWLGSTPLHLAAQYGHLEIVEVLLKHG----A 104
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
++ AQ+ G TPLH+AA G E ++LL +GA + + G T +S+
Sbjct: 105 DVNAQDNLGFTPLHLAANIGHLEIVEVLLKYGADVNVQDKFGKTAFDISI 154
>gi|371721793|gb|AEX55219.1| ankyrin domain protein [Wolbachia pipientis]
Length = 520
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ A+ + +TPLH+AA G + K L+A GA
Sbjct: 362 TPLHIAAEKNHIEVVKILVE-----KADVNAEGIEDKTPLHLAAAKGHEDVVKTLIAKGA 416
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK + TPLHL+ ++ VK LLE AD S KD +GKTP D L+ G
Sbjct: 417 KVKAKNGDRRTPLHLAA----KNGHEGIVKVLLEAGADPSLKDVDGKTPRD-LTKDQGII 471
Query: 170 KLRE 173
+L E
Sbjct: 472 QLLE 475
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A ++VK+L+ N + A+ + ETPLH+AA+ G + +L+A GA
Sbjct: 296 TPLHLAAREGCEDVVKTLIAKGAN----VNAEGIVDETPLHLAARGGHKDVVDILIAKGA 351
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ N TPLH++ +++ V +L AD +A+ E KTPL HL+ G
Sbjct: 352 KVNAQNNKRYTPLHIAA-----EKNHIEVVKILVEKADVNAEGIEDKTPL-HLAAAKGHE 405
Query: 170 KLRELLL 176
+ + L+
Sbjct: 406 DVVKTLI 412
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 58 YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN 117
+N E VK+LL N V + A++ G TPLH+AA+ GC + K L+A GA + A+
Sbjct: 271 HNNEEEVKNLL----NKGVNVNAKDDDGCTPLHLAAREGCEDVVKTLIAKGANVNAEGIV 326
Query: 118 GMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
TPLHL+ R V L+ A +A++N+ TPL
Sbjct: 327 DETPLHLAA----RGGHKDVVDILIAKGAKVNAQNNKRYTPL 364
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ +N A + K+L+E + ++ A++ TPLH+AA G + +L GA +
Sbjct: 74 LHLASYWNCANVAKALIE----NGADINAEHDNKITPLHIAAHYGHEDVVTILTGKGAIV 129
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+AK +G T LH +++ V TL+ A+ +A++++G PL HL+ G ++
Sbjct: 130 DAKNGDGWTSLH----FAVEKNHENVVNTLIGKGANVNAENDKGWAPL-HLAITNGHKEI 184
Query: 172 RELL 175
++L
Sbjct: 185 VQVL 188
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++ EIV+ L + G + ++A+N G TPLH+AA NG + + L+ GA
Sbjct: 172 PLHLAITNGHKEIVQVLSKAEG---INVDAKNSDGWTPLHLAAANGREDIVETLIEKGAD 228
Query: 111 IEAKANNGMTPLHL---------------------SVWYSIRSEDYATVKTLLEYNADCS 149
+ AK + TPL ++ +++ + VK LL + +
Sbjct: 229 VNAKDHYKWTPLTFASQKGHEVVKGALLKAQENIKALLSAVKHNNEEEVKNLLNKGVNVN 288
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLL 176
AKD++G TPL HL+ G + + L+
Sbjct: 289 AKDDDGCTPL-HLAAREGCEDVVKTLI 314
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 34/140 (24%)
Query: 50 TPLHVSAGYNKAEIVK------SLLEWPGND-----------------------KVELEA 80
TPLH++A Y ++V ++++ D + A
Sbjct: 105 TPLHIAAHYGHEDVVTILTGKGAIVDAKNGDGWTSLHFAVEKNHENVVNTLIGKGANVNA 164
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
+N G PLH+A NG E ++L A G ++AK ++G TPLHL+ ED V+
Sbjct: 165 ENDKGWAPLHLAITNGHKEIVQVLSKAEGINVDAKNSDGWTPLHLAAANG--REDI--VE 220
Query: 140 TLLEYNADCSAKDNEGKTPL 159
TL+E AD +AKD+ TPL
Sbjct: 221 TLIEKGADVNAKDHYKWTPL 240
>gi|357484621|ref|XP_003612598.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|355513933|gb|AES95556.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|388518069|gb|AFK47096.1| unknown [Medicago truncatula]
Length = 266
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 9/155 (5%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
+S +H A+SGDL+A Q +L NP +N R+ ++TPLH++A + E+V L +
Sbjct: 8 KSGTGGDLHAAARSGDLIAVQSILISNPLAVNSRDK-HSRTPLHLAAFSGQTEVVSYLCK 66
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+K ++ A M +H AA+ G E + L++ GA +A G+TPLH +V S
Sbjct: 67 ----NKADVGASAMDDMAAIHFAAQKGHLEVVRALVSAGASFKASTRKGVTPLHFAVQGS 122
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
VK L + A + K GKTPLD +N
Sbjct: 123 ----HLELVKYLSKKGASLTIKTKAGKTPLDLATN 153
>gi|340515428|gb|EGR45682.1| predicted protein [Trichoderma reesei QM6a]
Length = 118
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Query: 36 NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKN 95
+P + + R +TPL +A +K IV +LLE G D ++A ++ G TPL +AAKN
Sbjct: 1 DPDVTDSR----GRTPLSWAAEGDKPGIVVTLLE-QGADGAYIDAADVSGRTPLLLAAKN 55
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
G + A+ LL HGA IE++ +NG + L +V R A V+ L+EY AD ++D+ G
Sbjct: 56 GYRQIAEHLLEHGANIESRDDNGNSSLSWAVKMGHR----AVVELLVEYGADAQSEDDRG 111
Query: 156 KTPL 159
+TPL
Sbjct: 112 QTPL 115
>gi|294811104|ref|ZP_06769747.1| sporulation protein K-like protein [Streptomyces clavuligerus ATCC
27064]
gi|294323703|gb|EFG05346.1| sporulation protein K-like protein [Streptomyces clavuligerus ATCC
27064]
Length = 950
Score = 77.0 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D + EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 660 DAVLGELDGLVGLESVKREVRSLIDMIEVGRRRREAGLKAASVRR-HLVFTGSPGTGKTT 718
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 719 VARLYGEILAALGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 759
>gi|345490851|ref|XP_001607870.2| PREDICTED: tankyrase-1-like [Nasonia vitripennis]
Length = 1219
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
++SGDL A +R+L+ NP +N R+ TPLH +AGYN+ +V+ LL ++
Sbjct: 498 SKSGDLTAVERILQANPHSVNCRDLDGRHSTPLHFAAGYNRVPVVEYLLAH----GADVH 553
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + + E V+
Sbjct: 554 AKDKGGLVPLHNACSYGHYEVTELLVKHGASVNVADLWKFTPLHEAAAKG-KCE---IVR 609
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL + AD + K+ +G TPLD + +G
Sbjct: 610 LLLHHGADATKKNRDGATPLDLVRDG 635
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L QRL+ ++ +N R+ TPLH++AGYN E+ + LLE ++
Sbjct: 653 AKKGNLARVQRLVTQDN--INCRDAQGRNSTPLHLAAGYNNLEVAEFLLER----GADVN 706
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++
Sbjct: 707 AQDKGGLIPLHNASSYGHLDIAALLIKYSTVVNATDKWGFTPLHEAAQKG-RTQ---LCA 762
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD K+ EG++P+D
Sbjct: 763 LLLAHGADPFLKNQEGQSPVD 783
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
++GDL ++L+ P +N R+ TPLH +AGY + ++V+ LL ++A
Sbjct: 32 KTGDLARVKKLV--TPKTVNARDTAGRKSTPLHFAAGYGRRDVVEYLLLA----GASIQA 85
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ G PLH A G ++ +LLL GA + N TPLH + +I+ + +
Sbjct: 86 RDDGGLHPLHNACSFGHSDVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKIDVCI-A 141
Query: 141 LLEYNADCSAKDNEGKTPLD 160
LL++ AD + ++ EGKT L+
Sbjct: 142 LLQHGADPNIRNTEGKTALE 161
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ IV+ LL+ + ++ A++ G PLH A G E + LL HGA
Sbjct: 212 TPLHLAAGYNRSRIVQILLQ----NGADVHAKDKGGLVPLHNACSYGHFEVTEALLKHGA 267
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+ A TPLH + S R+E LL AD + + K+ +D
Sbjct: 268 AVNASDLWAFTPLHEAASKS-RAE---VCSLLLSEGADPTQLNCHSKSAID 314
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 11/125 (8%)
Query: 36 NPSLLNERNPVMAQTPLHVSAGY---NKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMA 92
+P + N ++P TPLH +A + +IV+ L+ V L +N TPLH+A
Sbjct: 351 SPEVANFKHPYSGDTPLHCAAASPYPKRKQIVEMLIR----KNVALNEKNKDFLTPLHVA 406
Query: 93 AKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
+ + +LLAH A + A G T LH R ++ + LL YN D S
Sbjct: 407 TDHSHYDVMDVLLAHNAKVNALDGLGQTALHRCA----REDNIQACRILLSYNVDQSIVS 462
Query: 153 NEGKT 157
+G T
Sbjct: 463 LQGYT 467
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 19/183 (10%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + ++LL +GA + AK G+ PLH + Y +
Sbjct: 201 VNCHASDGRRSTPLHLAAGYNRSRIVQILLQNGADVHAKDKGGLVPLHNACSYG----HF 256
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETK 195
+ LL++ A +A D TPL H + A++ LLL + + +K
Sbjct: 257 EVTEALLKHGAAVNASDLWAFTPL-HEAASKSRAEVCSLLLSEGADPTQLNC-----HSK 310
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKG-MLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ +D + EL+ +L KG LLD R+A K+ P +A +P +
Sbjct: 311 SAID--------VAPTLELQERLAYEYKGHCLLDACRQADPAKLKKYLSPEVANFKHPYS 362
Query: 255 GKT 257
G T
Sbjct: 363 GDT 365
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL GA + A+ G+ PLH + Y D A + L++Y+
Sbjct: 681 TPLHLAAGYNNLEVAEFLLERGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYST 736
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 737 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 770
>gi|315043286|ref|XP_003171019.1| cbbX protein [Arthroderma gypseum CBS 118893]
gi|311344808|gb|EFR04011.1| cbbX protein [Arthroderma gypseum CBS 118893]
Length = 1123
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 153 NEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLH 212
N KT ++G GS + L +Q RA A SET +M +VG
Sbjct: 580 NNAKTCQIKRTSGLGSRAVSPFLAPQDFDQDHSRATRA-SETIREM------FRGMVGCE 632
Query: 213 ELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGI 272
+ +L + K + E ++LG+ + + P F G PGTGKT VA+ +GR+ Y +GI
Sbjct: 633 GIISKLESYQK---IAEGLESLGMDISEQIPFSFLFRGPPGTGKTTVAKKMGRIYYDLGI 689
Query: 273 LPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
L T V E + ++ E+VG TGPKTRR
Sbjct: 690 LATPDVEECSTSHMIAEYVGQTGPKTRR 717
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLD---ERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
+L ++GL +K + + ++ E R+ ++ G R FLGNPGTGKT VA
Sbjct: 349 KLQELIGLKAVKDAVNTLRSSIQINYQRELREEPIIEFGLNR----VFLGNPGTGKTTVA 404
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
++ G +L +GIL V + D +G+++G + KT+
Sbjct: 405 KLYGEILKHLGILSDGEVVLKKPVDFIGQYLGESEEKTQ 443
>gi|123447455|ref|XP_001312467.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121894315|gb|EAX99537.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 624
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 10/155 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ + QT LH +A +N E VK LL N + +++ G+T LH
Sbjct: 417 ELLLSHGANINEKD-IDGQTALHYAAEFNSTETVKLLLSHGAN----INEKDIDGQTALH 471
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E KLLL+HG I K N+G T LH Y+ S T + L+++ A+ +
Sbjct: 472 YAAEFNSTETVKLLLSHGVKINEKDNDGKTTLH----YAAESNGAETAEILIKHGANINV 527
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
KDN+G+T L H+++ + E+LL H K+
Sbjct: 528 KDNDGETAL-HIASQHYGKETVEVLLSHGANVNKK 561
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 14/150 (9%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL + + +NE++ + QT LH +A +N E VK LL V++ ++ G+T LH
Sbjct: 450 KLLLSHGANINEKD-IDGQTALHYAAEFNSTETVKLLLSHG----VKINEKDNDGKTTLH 504
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA--TVKTLLEYNADC 148
AA++ E A++L+ HGA I K N+G T LH I S+ Y TV+ LL + A+
Sbjct: 505 YAAESNGAETAEILIKHGANINVKDNDGETALH------IASQHYGKETVEVLLSHGANV 558
Query: 149 SAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ KD GK L H + S ++ +LLL H
Sbjct: 559 NKKDKFGKAAL-HYAAEFNSTEIAKLLLSH 587
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH +A N E V+ LL N + +++ G+T LH AA+ E KLLL+HGA I
Sbjct: 404 LHSAASANSKETVELLLSHGAN----INEKDIDGQTALHYAAEFNSTETVKLLLSHGANI 459
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
K +G T LH Y+ TVK LL + + KDN+GKT L + + G A+
Sbjct: 460 NEKDIDGQTALH----YAAEFNSTETVKLLLSHGVKINEKDNDGKTTLHYAAESNG-AET 514
Query: 172 RELLLWH 178
E+L+ H
Sbjct: 515 AEILIKH 521
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 9/120 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH++A YN EI + L+ + + + YG T LH+AA E
Sbjct: 261 INEKDE-FEKTTLHIAAEYNNEEIAEFLISHG----ININQKAKYGYTALHIAANYNSKE 315
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++L++HG I K+N+G T LH + + + + VK LL A+ + KD G+T L
Sbjct: 316 TAEILISHGININEKSNDGSTALHNAAYNNYKE----MVKILLSRGANITEKDEFGETAL 371
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
+T L V+ +N+ E + L+ N + ++ Y + LH AA E +LLL+
Sbjct: 366 FGETALSVALVHNRIETAEFLVSKFSN----INDEDKYTKFVLHSAASANSKETVELLLS 421
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGP 166
HGA I K +G T LH Y+ TVK LL + A+ + KD +G+T L H +
Sbjct: 422 HGANINEKDIDGQTALH----YAAEFNSTETVKLLLSHGANINEKDIDGQTAL-HYAAEF 476
Query: 167 GSAKLRELLLWH 178
S + +LLL H
Sbjct: 477 NSTETVKLLLSH 488
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 16 TIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
T+H A+S + L++ ++ + N +T LH+++ + E V+ LL N
Sbjct: 502 TLHYAAESNGAETAEILIKHGANINVKDND--GETALHIASQHYGKETVEVLLSHGAN-- 557
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+ ++ +G+ LH AA+ E AKLLL+HGA K NG T L ++ S D
Sbjct: 558 --VNKKDKFGKAALHYAAEFNSTEIAKLLLSHGANFNDKDKNGNTALRIA---SSHDND- 611
Query: 136 ATVKTLLEYNA 146
T + L+EY A
Sbjct: 612 ETAEILIEYGA 622
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
CA+ +L A + N+ N Q SA +N + + L N +
Sbjct: 216 CAKYNNLDALLVYFDQT----NDINKCFIQ-----SARFNITSLCEYFLSLGAN----IN 262
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
++ + +T LH+AA+ E A+ L++HG I KA G T LH++ Y+ + T +
Sbjct: 263 EKDEFEKTTLHIAAEYNNEEIAEFLISHGININQKAKYGYTALHIAANYNSKE----TAE 318
Query: 140 TLLEYNADCSAKDNEGKTPL 159
L+ + + + K N+G T L
Sbjct: 319 ILISHGININEKSNDGSTAL 338
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 34/158 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A YN E + L+ + + ++ G T LH AA N E K+LL+ GA
Sbjct: 303 TALHIAANYNSKETAEILISHG----ININEKSNDGSTALHNAAYNNYKEMVKILLSRGA 358
Query: 110 FIEAKANNGMTPLHLSV--------------WYSIRSED-YA--------------TVKT 140
I K G T L +++ + +I ED Y TV+
Sbjct: 359 NITEKDEFGETALSVALVHNRIETAEFLVSKFSNINDEDKYTKFVLHSAASANSKETVEL 418
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LL + A+ + KD +G+T L H + S + +LLL H
Sbjct: 419 LLSHGANINEKDIDGQTAL-HYAAEFNSTETVKLLLSH 455
>gi|440694872|ref|ZP_20877450.1| ATPase, AAA family [Streptomyces turgidiscabies Car8]
gi|440283051|gb|ELP70399.1| ATPase, AAA family [Streptomyces turgidiscabies Car8]
Length = 621
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPG 253
A +DE +L +VGL +K Q++ + + + R GL V +PP H F G G
Sbjct: 332 ALLDEALAQLECMVGLEPVKRQVKALSAQLNMARLRAGQGLPV---QPPKRHFVFSGPSG 388
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLT 313
TGKT VARILGR+ Y +G+L D + E QR DLVGE++G T K + S I +
Sbjct: 389 TGKTTVARILGRVFYALGLLGGDHLVEAQRADLVGEYLGQTAVKANELID---SAIGGVL 445
Query: 314 FI 315
F+
Sbjct: 446 FV 447
>gi|262068218|ref|ZP_06027830.1| stage V sporulation protein K [Fusobacterium periodonticum ATCC
33693]
gi|291378086|gb|EFE85604.1| stage V sporulation protein K [Fusobacterium periodonticum ATCC
33693]
Length = 363
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
E E ++EL NEL+++VGL ++K ++ + + R+ L + + H+AF
Sbjct: 88 EKVEEDPKGLEELLNELNSLVGLKDVKSKVNDLITYQKVQKLREKHKLHI-TKSTLHLAF 146
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GNPGTGKT VARI+GR+ +G+L EV RTDL+ + G T K ++ +
Sbjct: 147 TGNPGTGKTTVARIVGRIYKQIGLLSKGHFIEVSRTDLIAGYQGQTALKVKKVI 200
>gi|409243031|gb|AFV32305.1| ankyrin domain protein, partial [Wolbachia endosymbiont of
Drosophila teissieri]
Length = 452
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 72/124 (58%), Gaps = 10/124 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ A+ + +TPLH+AA G + K L+A GA
Sbjct: 294 TPLHIAAEKNHIEVVKILVE-----KADVNAEGIEDKTPLHLAAAKGHEDVVKTLIAKGA 348
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK + TPLHL+ ++ VK LLE AD S KD +GKTP D L+ G
Sbjct: 349 KVKAKNGDRRTPLHLAA----KNGHEGIVKVLLEAGADPSLKDVDGKTPRD-LTKDQGII 403
Query: 170 KLRE 173
+L E
Sbjct: 404 QLLE 407
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A ++VK+L+ N + A+ + ETPLH+AA+ G + +L+A GA
Sbjct: 228 TPLHLAAREGCEDVVKTLIAKGAN----VNAEGIVDETPLHLAARGGHKDVVDILIAKGA 283
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ N TPLH++ +++ V +L AD +A+ E KTPL HL+ G
Sbjct: 284 KVNAQNNKRYTPLHIAA-----EKNHIEVVKILVEKADVNAEGIEDKTPL-HLAAAKGHE 337
Query: 170 KLRELLL 176
+ + L+
Sbjct: 338 DVVKTLI 344
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 58 YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN 117
+N E VK+LL N V + A++ G TPLH+AA+ GC + K L+A GA + A+
Sbjct: 203 HNNEEEVKNLL----NKGVNVNAKDDDGCTPLHLAAREGCEDVVKTLIAKGANVNAEGIV 258
Query: 118 GMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
TPLHL+ R V L+ A +A++N+ TPL
Sbjct: 259 DETPLHLAA----RGGHKDVVDILIAKGAKVNAQNNKRYTPL 296
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ +N A + K+L+E + ++ A++ TPLH+AA G + +L GA +
Sbjct: 6 LHLASYWNCANVAKALIE----NGADINAEHDNKITPLHIAAHYGHEDVVTILTGKGAIV 61
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+AK +G T LH +++ V TL+ A+ +A++++G PL HL+ G ++
Sbjct: 62 DAKNGDGWTSLH----FAVEKNHENVVNTLIGKGANVNAENDKGWAPL-HLAITNGHKEI 116
Query: 172 RELL 175
++L
Sbjct: 117 VQVL 120
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++ EIV+ L + G + ++A+N G TPLH+AA NG + + L+ GA
Sbjct: 104 PLHLAITNGHKEIVQVLSKAEG---INVDAKNSDGWTPLHLAAANGREDIVETLIEKGAD 160
Query: 111 IEAKANNGMTPLHL---------------------SVWYSIRSEDYATVKTLLEYNADCS 149
+ AK + TPL ++ +++ + VK LL + +
Sbjct: 161 VNAKDHYKWTPLTFASQKGHEVVKGALLKAQENIKALLSAVKHNNEEEVKNLLNKGVNVN 220
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLL 176
AKD++G TPL HL+ G + + L+
Sbjct: 221 AKDDDGCTPL-HLAAREGCEDVVKTLI 246
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 34/140 (24%)
Query: 50 TPLHVSAGYNKAEIVK------SLLEWPGND-----------------------KVELEA 80
TPLH++A Y ++V ++++ D + A
Sbjct: 37 TPLHIAAHYGHEDVVTILTGKGAIVDAKNGDGWTSLHFAVEKNHENVVNTLIGKGANVNA 96
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
+N G PLH+A NG E ++L A G ++AK ++G TPLHL+ ED V+
Sbjct: 97 ENDKGWAPLHLAITNGHKEIVQVLSKAEGINVDAKNSDGWTPLHLAAANG--REDI--VE 152
Query: 140 TLLEYNADCSAKDNEGKTPL 159
TL+E AD +AKD+ TPL
Sbjct: 153 TLIEKGADVNAKDHYKWTPL 172
>gi|297560588|ref|YP_003679562.1| ATPase AAA [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296845036|gb|ADH67056.1| AAA ATPase central domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 1110
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGT 254
+++EL L +VGL +K ++ + RR+A GL+ A P H+ F G PGT
Sbjct: 837 GQVEELMRRLDAMVGLAAVKREVADLVNLISAGRRRQAAGLE--APLPSRHLVFAGPPGT 894
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GKT VAR+ G LL +G+L +V E R DLVG +VGHT +TR
Sbjct: 895 GKTTVARVYGELLAALGVLAQGQVVEASRADLVGSYVGHTAQRTR 939
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL-KVGARRPPHMAFLGNPGTGK 256
++EL EL +VGL +K ++R + +R A GL + R H+ F G PGTGK
Sbjct: 554 LEELLAELDAMVGLDGVKKEVRALVNFQQVSVKRAAAGLPALNVSR--HLVFSGPPGTGK 611
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
T VAR+ GR+L +G+L + + E R DLV E +G T K
Sbjct: 612 TTVARLYGRILRSLGVLGSGQFVEAARPDLVAEHLGGTSTK 652
>gi|357414596|ref|YP_004926332.1| ATPase AAA [Streptomyces flavogriseus ATCC 33331]
gi|320011965|gb|ADW06815.1| AAA ATPase central domain protein [Streptomyces flavogriseus ATCC
33331]
Length = 651
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL +VGL +K Q++ + + + R GL V +PP H F G GTGKT VAR
Sbjct: 365 ELERMVGLEPVKRQVKALSAQLNMARLRAEQGLPV---QPPKRHFVFSGPSGTGKTTVAR 421
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
ILGR+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 422 ILGRVFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 469
>gi|90655402|gb|ABD96243.1| probable RuBisCo-expression protein CbbX [uncultured marine type-A
Synechococcus GOM 3M9]
gi|90655575|gb|ABD96412.1| probable RuBisCo-expression protein CbbX [uncultured marine type-A
Synechococcus GOM 4P21]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+++L+ EL +GL +K ++R+ A +L+D+ R+ L L A P HM+F G PGTGK
Sbjct: 20 LEQLDREL---IGLTPVKTRIREIAALLLVDQARQQLELPSTA--PSLHMSFTGRPGTGK 74
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA+ + ++L+ +G L V R DLVG++VGHT PKT+
Sbjct: 75 TTVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTK 117
>gi|56384489|gb|AAV85825.1| ankyrin domain protein [Wolbachia pipientis]
gi|409243037|gb|AFV32308.1| ankyrin domain protein, partial [Wolbachia endosymbiont of
Drosophila simulans]
Length = 506
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 9/111 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ A+ + +TPLH+AA G + K L+A GA
Sbjct: 348 TPLHIAAEKNHIEVVKILVE-----KADVNAEGIEDKTPLHLAAAKGHEDVVKTLIAKGA 402
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
++AK + TPLHL+ ++ VK LLE AD S KD +GKTP D
Sbjct: 403 KVKAKNGDRRTPLHLAA----KNGHEGIVKVLLEAGADPSLKDVDGKTPRD 449
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A ++VK+L+ N + A+ + ETPLH+AA+ G + +L+A GA
Sbjct: 282 TPLHLAAREGCEDVVKTLIAKGAN----VNAEGIVDETPLHLAARGGHKDVVDILIAKGA 337
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ N TPLH++ +++ V +L AD +A+ E KTPL HL+ G
Sbjct: 338 KVNAQNNKRYTPLHIAA-----EKNHIEVVKILVEKADVNAEGIEDKTPL-HLAAAKGHE 391
Query: 170 KLRELLL 176
+ + L+
Sbjct: 392 DVVKTLI 398
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 58 YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN 117
+N E VK+LL N V + A++ G TPLH+AA+ GC + K L+A GA + A+
Sbjct: 257 HNNEEEVKNLL----NKGVNVNAKDDDGCTPLHLAAREGCEDVVKTLIAKGANVNAEGIV 312
Query: 118 GMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
TPLHL+ R V L+ A +A++N+ TPL
Sbjct: 313 DETPLHLAA----RGGHKDVVDILIAKGAKVNAQNNKRYTPL 350
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ +N A + K+L+E + ++ A++ TPLH+AA G + +L GA +
Sbjct: 60 LHLASYWNCANVAKALIE----NGADINAEHDNKITPLHIAAHYGHEDVVTILTGKGAIV 115
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+AK +G T LH +++ V TL+ A+ +A++++G PL HL+ G ++
Sbjct: 116 DAKNGDGWTSLH----FAVEKNHENVVNTLIGKGANVNAENDKGWAPL-HLAITNGHKEI 170
Query: 172 RELL 175
++L
Sbjct: 171 VQVL 174
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++ EIV+ L + G + ++A+N G TPLH+AA NG + + L+ GA
Sbjct: 158 PLHLAITNGHKEIVQVLSKAEG---INVDAKNSDGWTPLHLAAANGREDIVETLIEKGAD 214
Query: 111 IEAKANNGMTPLHL---------------------SVWYSIRSEDYATVKTLLEYNADCS 149
+ AK + TPL ++ +++ + VK LL + +
Sbjct: 215 VNAKDHYKWTPLTFASQKGHEVVKGALLKAXENIKALLSAVKHNNEEEVKNLLNKGVNVN 274
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLL 176
AKD++G TPL HL+ G + + L+
Sbjct: 275 AKDDDGCTPL-HLAAREGCEDVVKTLI 300
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 34/140 (24%)
Query: 50 TPLHVSAGYNKAEIVK------SLLEWPGND-----------------------KVELEA 80
TPLH++A Y ++V ++++ D + A
Sbjct: 91 TPLHIAAHYGHEDVVTILTGKGAIVDAKNGDGWTSLHFAVEKNHENVVNTLIGKGANVNA 150
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
+N G PLH+A NG E ++L A G ++AK ++G TPLHL+ ED V+
Sbjct: 151 ENDKGWAPLHLAITNGHKEIVQVLSKAEGINVDAKNSDGWTPLHLAAANG--REDI--VE 206
Query: 140 TLLEYNADCSAKDNEGKTPL 159
TL+E AD +AKD+ TPL
Sbjct: 207 TLIEKGADVNAKDHYKWTPL 226
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 71/152 (46%), Gaps = 34/152 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNG------------- 96
TPLH++A + +IV++L+E G D + A++ Y TPL A++ G
Sbjct: 191 TPLHLAAANGREDIVETLIE-KGAD---VNAKDHYKWTPLTFASQKGHEVVKGALLKAXE 246
Query: 97 ------------CNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
E K LL G + AK ++G TPLHL+ R VKTL+
Sbjct: 247 NIKALLSAVKHNNEEEVKNLLNKGVNVNAKDDDGCTPLHLAA----REGCEDVVKTLIAK 302
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
A+ +A+ +TPL HL+ G + ++L+
Sbjct: 303 GANVNAEGIVDETPL-HLAARGGHKDVVDILI 333
>gi|134101955|ref|YP_001107616.1| sporulation protein [Saccharopolyspora erythraea NRRL 2338]
gi|291007034|ref|ZP_06565007.1| putative sporulation protein (partial match) [Saccharopolyspora
erythraea NRRL 2338]
gi|133914578|emb|CAM04691.1| putative sporulation protein (partial match) [Saccharopolyspora
erythraea NRRL 2338]
Length = 1141
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
K++ L N+L +VGL E+K ++ + +R+A GL V + H+ F G PGTGK
Sbjct: 868 KVELLLNKLQQMVGLSEVKYEVNNMVDLLASARQRQAAGLPVPSLSR-HLIFGGPPGTGK 926
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T VAR+ G +L +G+L +V EV R +LVGE+VGHT +T
Sbjct: 927 TTVARLYGEILAALGVLARGQVIEVGRANLVGEYVGHTAQRT 968
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGT 254
+ EL +EL+++VGL ++K ++ + + ERR A GL + PP H+ F G+PGT
Sbjct: 586 LGELLDELNSLVGLADVKREVEILTRLEQMAERRAAAGLPM----PPMSRHLVFTGSPGT 641
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GKT VAR+ G++L +G+L + ++ EV R DLV VG T KT
Sbjct: 642 GKTTVARLYGKILAELGVLRSGQLVEVGRADLVASIVGGTAMKT 685
>gi|123449116|ref|XP_001313280.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121895158|gb|EAY00351.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 560
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N EI + L+ N ++ ++ GET LH
Sbjct: 419 ELLISHGANINEKNE-DGETALYIAALNNSKEIAEFLISHGAN----IDEKDNDGETALH 473
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+LL+ HGA I K NNG T LH++ W + + T + L+ + A+ +
Sbjct: 474 IAALNNSKETAELLILHGANINEKDNNGETALHIAAWNNFKE----TAELLILHGANINE 529
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN+G+T L H++ S + E L+ H
Sbjct: 530 KDNDGETAL-HIAAKKNSKETAEFLISH 556
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N EI + L+ N ++ ++ GET LH
Sbjct: 221 ELLISHGANINEKNE-DGETALYIAALNNYKEIAEFLISHGAN----IDEKDNDGETALH 275
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+LL+ HGA I K NNG T LH++ W + + T + L+ + A+ +
Sbjct: 276 IAALNNSKETAELLILHGANINEKDNNGETALHIAAWNNFKE----TAELLILHGANINE 331
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
K+N GKT L H++ S + ELL+ H
Sbjct: 332 KNNNGKTAL-HIAAWNNSKETAELLISH 358
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N EI + L+ N ++ ++ GET L+
Sbjct: 353 ELLISHGANINEKNE-DGETALYIAALNNYKEIAEFLISHGAN----IDEKDNDGETALY 407
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+LL++HGA I K +G T L+++ + + + L+ + A+
Sbjct: 408 IAALNNFKEIAELLISHGANINEKNEDGETALYIAALNNSKE----IAEFLISHGANIDE 463
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN+G+T L H++ S + ELL+ H
Sbjct: 464 KDNDGETAL-HIAALNNSKETAELLILH 490
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T L+++A N EI + L+ N + +N GET L++AA N E A+LL++HG
Sbjct: 172 ETALYIAALNNFKEIAELLISHGAN----INEKNEDGETALYIAALNNYKETAELLISHG 227
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G T L+++ + + + L+ + A+ KDN+G+T L H++ S
Sbjct: 228 ANINEKNEDGETALYIAALNNYKE----IAEFLISHGANIDEKDNDGETAL-HIAALNNS 282
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 283 KETAELLILH 292
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N EI + L+ N + +N GET L+
Sbjct: 89 ELLISHGANINEKNE-DGETALYIAALNNYKEIAEFLISHGAN----INEKNEDGETALY 143
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+ L++HGA I+ K N+G T L+++ + + + L+ + A+ +
Sbjct: 144 IAALNNYKEIAEFLISHGANIDEKDNDGETALYIAALNNFKE----IAELLISHGANINE 199
Query: 151 KDNEGKTPL 159
K+ +G+T L
Sbjct: 200 KNEDGETAL 208
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH++A N E + L+ N + +N G+T LH+AA N E
Sbjct: 296 INEKDN-NGETALHIAAWNNFKETAELLILHGAN----INEKNNNGKTALHIAAWNNSKE 350
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HGA I K +G T L+++ + + + L+ + A+ KDN+G+T L
Sbjct: 351 TAELLISHGANINEKNEDGETALYIAALNNYKE----IAEFLISHGANIDEKDNDGETAL 406
Query: 160 DHLSNGPGSAKLRELLLWH 178
+++ ++ ELL+ H
Sbjct: 407 -YIAALNNFKEIAELLISH 424
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N + +N GET L++AA N E A+LL++HG
Sbjct: 40 KTALHIAAWNNYKETAELLISHGAN----INEKNEDGETALYIAALNNYKETAELLISHG 95
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G T L+++ + + + L+ + A+ + K+ +G+T L +++
Sbjct: 96 ANINEKNEDGETALYIAALNNYKE----IAEFLISHGANINEKNEDGETAL-YIAALNNY 150
Query: 169 AKLRELLLWH 178
++ E L+ H
Sbjct: 151 KEIAEFLISH 160
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 84 YGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLE 143
YG+T LH+AA N E A+LL++HGA I K +G T L+++ + + T + L+
Sbjct: 38 YGKTALHIAAWNNYKETAELLISHGANINEKNEDGETALYIAALNNYKE----TAELLIS 93
Query: 144 YNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ A+ + K+ +G+T L +++ ++ E L+ H
Sbjct: 94 HGANINEKNEDGETAL-YIAALNNYKEIAEFLISH 127
>gi|294811223|ref|ZP_06769866.1| Putative sporulation protein K-like protein [Streptomyces
clavuligerus ATCC 27064]
gi|326439822|ref|ZP_08214556.1| hypothetical protein SclaA2_02100 [Streptomyces clavuligerus ATCC
27064]
gi|294323822|gb|EFG05465.1| Putative sporulation protein K-like protein [Streptomyces
clavuligerus ATCC 27064]
Length = 1101
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D + EL +VGL +K ++ + RR+A GL V R H+ F G+PGTGKT
Sbjct: 830 DSMLAELDGMVGLRAVKREVTDLVSLLTTARRREAAGLPV-PRISRHLVFSGSPGTGKTT 888
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ RLL +G+L ++ EV R DLVG +VGHT T+
Sbjct: 889 VARLYARLLASLGVLSRGQLVEVARADLVGRYVGHTAQLTK 929
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L ++GL +K Q+R L +RRK LG+ V + H+ F G PGTGKT VAR+ G
Sbjct: 560 LEALIGLENVKHQVRTLVNLNQLAQRRKRLGMPVPSMSR-HLVFAGPPGTGKTTVARLYG 618
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+L +G+LP + EV R DLV + +G T KT
Sbjct: 619 SILAELGVLPQGHLVEVSRADLVAQVIGGTAIKT 652
>gi|302562076|ref|ZP_07314418.1| stage V sporulation protein K [Streptomyces griseoflavus Tu4000]
gi|302479694|gb|EFL42787.1| stage V sporulation protein K [Streptomyces griseoflavus Tu4000]
Length = 1105
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 4/122 (3%)
Query: 181 EQRKRRALEACSETKAKMDELENELS---NIVGLHELKIQLRKWAKGMLLDERRKALGLK 237
E A A SE A D N L+ ++VGL +K + + + +R+A GL
Sbjct: 813 EDVGEEAARAVSEEAASADSENNPLARLGDLVGLAGVKRDVTNLVNLLSVTRQREAAGLP 872
Query: 238 VGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
+ H+ F G PGTGKT VAR+ G LL +G+LP ++ EV R DLVG +VGHT
Sbjct: 873 -APQISHHLVFTGPPGTGKTTVARLYGELLVSLGVLPRGQLVEVARADLVGRYVGHTAQL 931
Query: 298 TR 299
TR
Sbjct: 932 TR 933
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 7/97 (7%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTMVAR 261
L ++GL +K Q+R L + R LG+ PP H+ F G PGTGKT VAR
Sbjct: 558 LDALIGLDNVKQQVRTLVNLTRLAQHRTRLGMAA----PPMSRHLVFAGPPGTGKTTVAR 613
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+ G +L +G L + + EV R DLV + +G T KT
Sbjct: 614 LYGTILAELGALRSGHLVEVSRADLVAQVIGGTAIKT 650
>gi|431793798|ref|YP_007220703.1| AAA ATPase [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784024|gb|AGA69307.1| AAA+ family ATPase [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 321
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 2/124 (1%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
E QR R+ + +E K + E+ EL +VGL +K + + + + +RR L
Sbjct: 33 QEPQRGRKVIHNAAENK-DIAEILAELDALVGLTTVKRLINEIQAYIEIQKRRTREKL-T 90
Query: 239 GARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
HM F GNPGTGKT VAR++G+L + +L + E +R DLVGE++GHT KT
Sbjct: 91 AEPLVLHMIFRGNPGTGKTTVARLIGKLFREMEVLQKGHIIECERADLVGEYIGHTAQKT 150
Query: 299 RRRV 302
R +V
Sbjct: 151 RDQV 154
>gi|14194485|sp|Q9MS99.1|CFXQ_GALSU RecName: Full=Protein cfxQ homolog
gi|8925951|gb|AAF81683.1|AF233069_6 unknown [Galdieria sulphuraria]
Length = 305
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 195 KAKMDELENELSN-IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
K K+ E+ N+L ++GL +K ++++ A +L+D+ R L L A HM+F G+PG
Sbjct: 28 KTKIQEVLNQLDKELIGLTPVKNRIKEIAALLLIDKLRIKLNLP-QANPGLHMSFTGSPG 86
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
TGKT VA + +LY++G + + V R DLVG+++GHT PKT+
Sbjct: 87 TGKTTVATKMADILYLLGYIRKGHLLTVTRDDLVGQYIGHTAPKTK 132
>gi|123404687|ref|XP_001302477.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121883769|gb|EAX89547.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 932
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 14/154 (9%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A YNK E + L+ N + ++ G T LH+AA++ E A++L++HG
Sbjct: 445 KTALHIAAQYNKKETAEVLISHGAN----INEKDDDGYTALHIAAEHNSTETAEVLISHG 500
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K NNG T LH++ ++ T + L+ + A+ + KDN G+T L H++ S
Sbjct: 501 ANINEKDNNGQTALHIAAEHNSTE----TAEVLISHGANINEKDNNGQTAL-HIAAEHNS 555
Query: 169 AKLRELLLWH----SEEQRKRR-ALEACSETKAK 197
+ E+L+ H +E+ +KR+ AL E K
Sbjct: 556 TETAEVLISHGININEKDKKRKTALHIAVENNCK 589
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 14/164 (8%)
Query: 27 LAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGE 86
+ ++L + + +NE+N QT LH ++ YN+ E + L+ N + +N +G+
Sbjct: 721 IEIAKVLISHGANINEKNK-HGQTALHFASEYNRKETAEVLISHGAN----INEKNKHGQ 775
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
T LH A++ E A++L++HGA I K G T LH++ Y+ + + L+ + A
Sbjct: 776 TALHFASEYNRKETAEVLISHGANINEKDKYGRTALHIASDYNSKR----AAERLISHGA 831
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH----SEEQRKRR 186
+ + KDN G+T L H++ S + E+L+ H +E+ +KR+
Sbjct: 832 NINEKDNNGQTAL-HIAAEHNSTETAEVLISHGININEKDKKRK 874
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 17/175 (9%)
Query: 5 QDRRSRSA-KPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
+D++ ++A A + C + D+L + + +NE++ +T LH++ N EI
Sbjct: 572 KDKKRKTALHIAVENNCKEITDILI------SHGANINEKDK-YEETALHIAVENNSEEI 624
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ N + +N +G+T LH A++ E A++L++HGA I K G T LH
Sbjct: 625 AELLISHGAN----INEKNKHGKTALHFASEYNRKETAEVLISHGANINEKDKYGRTALH 680
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++ WY+ + T + L+ + A+ + KDN G T L H++ S ++ ++L+ H
Sbjct: 681 IAAWYNSKE----TAEVLISHGANINEKDNNGDTAL-HIAAEDYSIEIAKVLISH 730
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 15/163 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N QT LH ++ YN+ E + L+ N + ++ YG T LH+A+
Sbjct: 767 INEKNK-HGQTALHFASEYNRKETAEVLISHGAN----INEKDKYGRTALHIASDYNSKR 821
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
AA+ L++HGA I K NNG T LH++ ++ T + L+ + + + KD + KT L
Sbjct: 822 AAERLISHGANINEKDNNGQTALHIAAEHNSTE----TAEVLISHGININEKDKKRKTAL 877
Query: 160 DHLSNGPGSAKLRELLLWH----SEEQRKRR-ALEACSETKAK 197
H++ ++ E+L+ + +E+ RKR+ AL +E +K
Sbjct: 878 -HIAAAKNCEEMAEVLVSYGININEKDRKRKTALHIATECNSK 919
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ T LH++A EI K L+ N + +N +G+T LH A++ E
Sbjct: 701 INEKDN-NGDTALHIAAEDYSIEIAKVLISHGAN----INEKNKHGQTALHFASEYNRKE 755
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++L++HGA I K +G T LH + Y+ R E T + L+ + A+ + KD G+T L
Sbjct: 756 TAEVLISHGANINEKNKHGQTALHFASEYN-RKE---TAEVLISHGANINEKDKYGRTAL 811
Query: 160 DHLSNGPGSAKLRELLLWH 178
H+++ S + E L+ H
Sbjct: 812 -HIASDYNSKRAAERLISH 829
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A +N E + L+ N + ++ G+T LH+AA++ E A++L++HGA
Sbjct: 479 TALHIAAEHNSTETAEVLISHGAN----INEKDNNGQTALHIAAEHNSTETAEVLISHGA 534
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I K NNG T LH++ ++ T + L+ + + + KD + KT L H++
Sbjct: 535 NINEKDNNGQTALHIAAEHNSTE----TAEVLISHGININEKDKKRKTAL-HIAVENNCK 589
Query: 170 KLRELLLWH 178
++ ++L+ H
Sbjct: 590 EITDILISH 598
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 93/174 (53%), Gaps = 15/174 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+D++ ++A +H A++ + + L+ ++ NE++ QT LH +A +N E
Sbjct: 374 KDKKRKTA----LHFAAKNNNKETAEVLISHGANI-NEKDN-NGQTALHTAAEHNSTETA 427
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ L+ + + ++ +T LH+AA+ E A++L++HGA I K ++G T LH+
Sbjct: 428 EVLISHG----ININEKDKKRKTALHIAAQYNKKETAEVLISHGANINEKDDDGYTALHI 483
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ ++ T + L+ + A+ + KDN G+T L H++ S + E+L+ H
Sbjct: 484 AAEHNSTE----TAEVLISHGANINEKDNNGQTAL-HIAAEHNSTETAEVLISH 532
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%), Gaps = 15/174 (8%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+D++ ++A +H A++ + + L+ ++ NE++ QT LH +A +N E
Sbjct: 308 KDKKRKTA----LHFAAKNNNKETAEVLISHGANI-NEKDN-NGQTALHTAAEHNSTETA 361
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ L+ + + ++ +T LH AAKN E A++L++HGA I K NNG T LH
Sbjct: 362 EVLISHG----ININEKDKKRKTALHFAAKNNNKETAEVLISHGANINEKDNNGQTALHT 417
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ ++ T + L+ + + + KD + KT L H++ + E+L+ H
Sbjct: 418 AAEHNSTE----TAEVLISHGININEKDKKRKTAL-HIAAQYNKKETAEVLISH 466
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ QT LH++A +N E + L+ + + ++ +T LH+A +N C E
Sbjct: 536 INEKDN-NGQTALHIAAEHNSTETAEVLISHG----ININEKDKKRKTALHIAVENNCKE 590
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+L++HGA I K T LH++V + SE+ A + L+ + A+ + K+ GKT L
Sbjct: 591 ITDILISHGANINEKDKYEETALHIAVENN--SEEIAEL--LISHGANINEKNKHGKTAL 646
Query: 160 DHLSNGPGSAKLRELLLWH 178
H ++ + E+L+ H
Sbjct: 647 -HFASEYNRKETAEVLISH 664
>gi|341900089|gb|EGT56024.1| hypothetical protein CAEBREN_16590 [Caenorhabditis brenneri]
Length = 1806
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+++ Y E+V+ LLE V++E +N TPLH+AA ++ A LLL +GA
Sbjct: 559 TPLHLASKYGNLEVVRLLLER--GTPVDIEGKNQV--TPLHVAAHYNNDKVAMLLLENGA 614
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+A A NG TPLH++ + TLL++NAD +AK G TPL HL+ G
Sbjct: 615 SAKAAAKNGYTPLHIAA----KKNQMEIASTLLQFNADPNAKSRAGFTPL-HLAAQEGHK 669
Query: 170 KLRELLL 176
++ LL+
Sbjct: 670 EISGLLI 676
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 76/130 (58%), Gaps = 11/130 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ + A++ G TPLH+AA+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----NADPNAKSRAGFTPLHLAAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL-EYNADCSAKDNEGKTPLDHLSNGPGS 168
+ AKANNG+T +HL ED+ V +L + A+ ++K N G TPL H++ G
Sbjct: 681 DVGAKANNGLTAMHLCA-----QEDHVPVAQILHDSGAEINSKTNAGYTPL-HVACHFGQ 734
Query: 169 AKLRELLLWH 178
+ + L+ H
Sbjct: 735 LNMVKFLVEH 744
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DAKGKVRLPA-LHIAAKKDDTKAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LL+ N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLDKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ + A
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNQA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVVLLLQAGANANATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H ++
Sbjct: 538 EVASILLDHGADK 550
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH+++ +IV LL+ N A +PLH+AAK G E A +LL HG
Sbjct: 492 QTPLHIASRLGNTDIVVLLLQAGAN----ANATTRDNYSPLHIAAKEGQEEVASILLDHG 547
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A G TPLHL+ Y + V+ LLE + TPL H++ +
Sbjct: 548 ADKSLLTKKGFTPLHLASKYG----NLEVVRLLLERGTPVDIEGKNQVTPL-HVAAHYNN 602
Query: 169 AKLRELLL 176
K+ LLL
Sbjct: 603 DKVAMLLL 610
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 21/154 (13%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQT-----PLHVSAGYNKAEIVKSLLE 69
A +H AQ GD + R +LL R PV T PLHV+A ++ K LL+
Sbjct: 328 APLHMAAQ-GDHVDAAR------TLLYHRAPVDDVTVDYLTPLHVAAHCGHVKVAKLLLD 380
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ ++ + G TPLH+A K + +LLL + A IEA +G+TPLH++ +
Sbjct: 381 RSADPN----SRALNGFTPLHIACKKNRIKVVELLLKYRAAIEATTESGLTPLHVAAFMG 436
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
V LL+ A+ + G+TPL HL+
Sbjct: 437 A----INIVIYLLQQGANPDVETVRGETPL-HLA 465
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L ++ + +N + TPLHV+ + + +VK L+E G D
Sbjct: 693 MHLCAQE-DHVPVAQILHDSGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVEH-GADVG 749
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
E + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 750 E---KTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ + + LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEDVVRYLLNHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDAKGKVRLPALHIAAKKDDTKAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSK--SGFTPL-HIAAHYGHENVGQLLL 247
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L + E+ ++ G TPLH+A G K L+ HGA
Sbjct: 691 TAMHLCAQEDHVPVAQIL----HDSGAEINSKTNAGYTPLHVACHFGQLNMVKFLVEHGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|365865950|ref|ZP_09405581.1| hypothetical protein SPW_5885 [Streptomyces sp. W007]
gi|364004634|gb|EHM25743.1| hypothetical protein SPW_5885 [Streptomyces sp. W007]
Length = 1102
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+++VGL +K ++ + RRKA GL R H+ F G PGTGKT VAR+ G
Sbjct: 842 LNSLVGLASVKREVGDLVHLLAAASRRKAAGLPA-PRISNHLVFAGPPGTGKTTVARLYG 900
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LL +G+LP ++ EV R DLVG +VGHT TR
Sbjct: 901 ELLASLGVLPRGQLVEVSRADLVGRYVGHTAQLTR 935
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTMVA 260
EL +++GL E+K Q+ + +RR +G+ PP H+ F G PGTGKT VA
Sbjct: 564 ELESLIGLDEVKQQVLTLINLNRMAQRRARIGMPA----PPMSRHLVFAGPPGTGKTTVA 619
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
R+ G +L +G+L + + EV R DLV + +G T KT
Sbjct: 620 RLYGSILASLGVLRSGHLVEVSRADLVAQIIGGTAIKT 657
>gi|365884787|ref|ZP_09423815.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. ORS 375]
gi|365286573|emb|CCD96346.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. ORS 375]
Length = 307
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ + +++L+ EL VGL +K ++R+ A +L++ R+ +GL A P
Sbjct: 20 RREFESV-DIAPVLEQLDREL---VGLAPVKTRIREIASLLLMERIRQKMGL---ATTFP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 129
>gi|365900796|ref|ZP_09438656.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. STM 3843]
gi|365418360|emb|CCE11198.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. STM 3843]
Length = 304
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 7/116 (6%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E E +++L+ EL VGL +K ++R+ A +L++ R+ +GL P
Sbjct: 20 RREFEDV-EIAPVLEQLDREL---VGLAPVKTRIREIASLLLMERIRQKMGLTTTF--PT 73
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 74 LHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 129
>gi|123439425|ref|XP_001310484.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121892256|gb|EAX97554.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 587
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH S N + LL G+D + ++++ G TPLH+A N CNE AKLL++ G
Sbjct: 367 NTPLHFSCENNYKNNMCELLISNGSD---INSKDINGRTPLHIAIINHCNEIAKLLVSRG 423
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + K N+G TPLH SV + VK L + AD +A DN KT L S
Sbjct: 424 ADLNIKENSGKTPLHYSVELDNK------VKLLTSHGADINANDNSDKTALHIASQNQDR 477
Query: 169 AKLRELLLWH 178
+ E L+ H
Sbjct: 478 IDIMEFLISH 487
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 9/111 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNG-CNEAAKLLLAH 107
+T LH+ A N+ I ++E+ + ++ A+++ G+TPLHMAA+N C+ KL+L+
Sbjct: 465 KTALHI-ASQNQDRI--DIMEFLISHGADINAKDIRGKTPLHMAAENCFCDAIEKLILS- 520
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
GA I AK NG T LH Y S V+ L+ + AD +AKDNE K P
Sbjct: 521 GADINAKDENGKTILH----YIAESSITWIVEFLVSHGADINAKDNENKIP 567
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 7/111 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH+++ + ++E+ LE+ + ++ +++ G+T LH AA G +K L+AH
Sbjct: 301 KTPLHIASYFYRSEV----LEYLVVNGADVNIKDISGKTALHYAALYGNATNSKFLIAHS 356
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A + AK N TPLH S + ++ + L+ +D ++KD G+TPL
Sbjct: 357 ADVNAKDNENNTPLHFSCENNYKNN---MCELLISNGSDINSKDINGRTPL 404
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++ N E V+ LL N + AQN ETPL +A +N + LLAHGA
Sbjct: 2 TALHLAVQNNCKETVELLLSHGAN----VNAQNSELETPLCIAVENNNKIILEDLLAHGA 57
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
F+ K +G T LH+++ + RSE K L+ + A+ KD + T L H + G G
Sbjct: 58 FVNTKYIDGSTALHVAIQNN-RSE---ISKFLITHGANLDIKDVDENTAL-HYAIGKGE- 111
Query: 170 KLRELLLWH 178
++ ELL+ H
Sbjct: 112 EIVELLISH 120
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 40/148 (27%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGC---NEAAKLLL 105
+T LH+S+ + + + LL G +++ ++ YG++PLH A K C N +LLL
Sbjct: 233 KTALHISSMHKECYDLTELLISHG---LDVNLKDKYGQSPLHYAVK--CADGNRTIELLL 287
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSE--DYATV------------------------- 138
+GA I K + TPLH++ ++ RSE +Y V
Sbjct: 288 KNGADINMKDRDEKTPLHIASYF-YRSEVLEYLVVNGADVNIKDISGKTALHYAALYGNA 346
Query: 139 ---KTLLEYNADCSAKDNEGKTPLDHLS 163
K L+ ++AD +AKDNE TPL H S
Sbjct: 347 TNSKFLIAHSADVNAKDNENNTPL-HFS 373
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Query: 39 LLNERNPVMAQT-----PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAA 93
LL+ R V Q LH++ K I K +LE + +++ +++ +T LH+++
Sbjct: 184 LLSHRAQVNVQDENGNPALHIAV---KKAIDKEILELLISHGIDINSKDSDNKTALHISS 240
Query: 94 KNG-CNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED-YATVKTLLEYNADCSAK 151
+ C + +LL++HG + K G +PLH Y+++ D T++ LL+ AD + K
Sbjct: 241 MHKECYDLTELLISHGLDVNLKDKYGQSPLH----YAVKCADGNRTIELLLKNGADINMK 296
Query: 152 DNEGKTPL 159
D + KTPL
Sbjct: 297 DRDEKTPL 304
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN-EAAKLLLAHGAFIEAKANNGMTPLH 123
K ++E + + ++ Q+ G LH+A K + E +LL++HG I +K ++ T LH
Sbjct: 178 KEIIELLLSHRAQVNVQDENGNPALHIAVKKAIDKEILELLISHGIDINSKDSDNKTALH 237
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+S S+ E Y + L+ + D + KD G++PL + + ELLL
Sbjct: 238 IS---SMHKECYDLTELLISHGLDVNLKDKYGQSPLHYAVKCADGNRTIELLL 287
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 60/116 (51%), Gaps = 11/116 (9%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN-EAAKLLLAH 107
+TPLH S + VK LL G D + A + +T LH+A++N + + L++H
Sbjct: 434 KTPLHYSVELDNK--VK-LLTSHGAD---INANDNSDKTALHIASQNQDRIDIMEFLISH 487
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
GA I AK G TPLH++ ++ L+ AD +AKD GKT L +++
Sbjct: 488 GADINAKDIRGKTPLHMAAENCFCD----AIEKLILSGADINAKDENGKTILHYIA 539
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 76 VELEAQNMYGETPLHMAAKNGCN-EAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
+ + ++ +G T L +A +N + E +LLL+H A + + NG LH++V +I E
Sbjct: 155 INVNFKDKHGRTALLIALENNSSKEIIELLLSHRAQVNVQDENGNPALHIAVKKAIDKE- 213
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++ L+ + D ++KD++ KT L S L ELL+ H
Sbjct: 214 --ILELLISHGIDINSKDSDNKTALHISSMHKECYDLTELLISH 255
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 11 SAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEW 70
++ +H +Q+ D + L + + +N ++ + +TPLH++A + ++ L+
Sbjct: 462 NSDKTALHIASQNQDRIDIMEFLISHGADINAKD-IRGKTPLHMAAENCFCDAIEKLI-L 519
Query: 71 PGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSI 130
G D + A++ G+T LH A++ + L++HGA I AK N P ++ + +
Sbjct: 520 SGAD---INAKDENGKTILHYIAESSITWIVEFLVSHGADINAKDNENKIPYEIATFNEV 576
Query: 131 R 131
+
Sbjct: 577 K 577
>gi|260426826|ref|ZP_05780805.1| CbbX protein [Citreicella sp. SE45]
gi|260421318|gb|EEX14569.1| CbbX protein [Citreicella sp. SE45]
Length = 309
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K ++R+ A +L+D R+ LGL A P HM+F GNPGTGKT VA +
Sbjct: 35 LVGLAPVKQRIRETAALLLVDRARRQLGL---ATETPTLHMSFTGNPGTGKTTVALRIAD 91
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 92 LLHRLGYVRKGHLVTVTRDDLVGQYIGHTAPKTK 125
>gi|403380633|ref|ZP_10922690.1| ATPase AAA [Paenibacillus sp. JC66]
Length = 189
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL ++GL +K + + +L+ R GL A HM F GNPGTGKT VARI
Sbjct: 54 KELERMIGLDNVKELIYEIYALLLIKRYRAEAGLHYDAH-VYHMVFKGNPGTGKTTVARI 112
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ +LL+ +G+L + EV R +LVGE++GHT KT+
Sbjct: 113 VAKLLHELGVLSKGHLLEVDRAELVGEYIGHTAQKTK 149
>gi|124262575|ref|YP_001023045.1| AAA ATPase [Methylibium petroleiphilum PM1]
gi|124261821|gb|ABM96810.1| AAA+ class-like ATPase [Methylibium petroleiphilum PM1]
Length = 469
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 1/118 (0%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR + T +D L ++L+ +VG+ +K ++++ + ++ R+ GL
Sbjct: 188 RREDPRINRTGESVDTLVDQLNAMVGIDVVKQEVQRLVNSIKVNSLREERGLPT-TNTTN 246
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
H+ F GNPGTGKT VAR+LGR+ + +G+L + EV R+ LV +VG T KTR+ V
Sbjct: 247 HLVFYGNPGTGKTTVARLLGRIFHGLGVLERGHLVEVDRSGLVAGYVGQTAIKTRQTV 304
>gi|154417725|ref|XP_001581882.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916113|gb|EAY20896.1| hypothetical protein TVAG_437220 [Trichomonas vaginalis G3]
Length = 1100
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 8/119 (6%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+N RN PLH++A N EI + LL N + A+ + G+ PLH AA + N+
Sbjct: 518 INSRNLNYGCCPLHLAAWMNNKEIAEILLSQGAN----INARTIDGKIPLHFAALHQFND 573
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
A+ L+ HGA I AK +G TPLH Y+I +++ T K L+ AD + DN+ TP
Sbjct: 574 TAEFLIMHGADINAKDKSGRTPLH----YAILLQNFETAKLLISPGADINISDNDKVTP 628
Score = 63.5 bits (153), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 10/154 (6%)
Query: 33 LRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMA 92
L + + +NE++ + + T LH +A + + L+ + +E+ AQN G T LH++
Sbjct: 809 LYSHGAFINEQD-LTSSTALHAAASNDSVTPARFLIL----NGIEINAQNFDGNTALHIS 863
Query: 93 AKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
+ A+LLL +G + + N G + LH Y++ + V+ LL + AD + +D
Sbjct: 864 SNKNFTAMAELLLLNGVNVNLRNNEGCSALH----YAVLNNSQEMVQLLLSHGADINLRD 919
Query: 153 NEGKTPLDHLS-NGPGSAKLRELLLWHSEEQRKR 185
N +TPL ++S +++ LLL HS + R
Sbjct: 920 NLERTPLHYISFRDKNVSQMITLLLSHSADINAR 953
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 14/153 (9%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
QD S +A +H A S D + R L N +N +N T LH+S+ N +
Sbjct: 819 QDLTSSTA----LHAAA-SNDSVTPARFLILNGIEINAQN-FDGNTALHISSNKNFTAMA 872
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ LL + V + +N G + LH A N E +LLL+HGA I + N TPLH
Sbjct: 873 ELLLL----NGVNVNLRNNEGCSALHYAVLNNSQEMVQLLLSHGADINLRDNLERTPLH- 927
Query: 125 SVWYSIRSEDYATVKTLL-EYNADCSAKDNEGK 156
+ S R ++ + + TLL ++AD +A+D++GK
Sbjct: 928 --YISFRDKNVSQMITLLLSHSADINARDDQGK 958
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 17/126 (13%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGN------------DKVELEAQNM-YGETPLHMAAKN 95
++ LH + N E+V+ L + + ++++ ++N+ YG PLH+AA
Sbjct: 477 ESALHYAVFNNSKEVVELLFSYNLDIQNKSETNSYIQQEIDINSRNLNYGCCPLHLAAWM 536
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
E A++LL+ GA I A+ +G PLH + + T + L+ + AD +AKD G
Sbjct: 537 NNKEIAEILLSQGANINARTIDGKIPLHFAALHQFND----TAEFLIMHGADINAKDKSG 592
Query: 156 KTPLDH 161
+TPL +
Sbjct: 593 RTPLHY 598
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+ LH+S N +++V+ LL + + + +N+ G+T LH+A+K + K L+AHG+
Sbjct: 313 SALHLSVKSNHSQMVEFLL----SHGINVNKENINGDTSLHLASKCKNIQTVKTLIAHGS 368
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I +K N TPLHL+ + + V L++ A+ + NE +T L
Sbjct: 369 KINSKNKNKETPLHLATL----NNNIEIVNFLIDNGANVNLMTNESQTVL 414
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+QT LH +A N E V++ +E N + AQN T LH AA N A+LL+ H
Sbjct: 410 SQTVLHNAAMNNNIEFVENFIELGAN----VNAQNDQKVTALHYAAINNNVTIAELLIMH 465
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
GA I N + LH Y++ + V+ L YN D K
Sbjct: 466 GADINLYDKNHESALH----YAVFNNSKEVVELLFSYNLDIQNK 505
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 12/174 (6%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
+ +T L ++ N EI++ LL ++ V + ++ G T L AA G + L +
Sbjct: 756 LGKTYLQLAVEQNNLEIIELLL----SNGVNINEKDEKGRTALFYAATLGNDSVIGYLYS 811
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA-DCSAKDNEGKTPLDHLSNG 165
HGAFI + T LH + S D T L N + +A++ +G T L H+S+
Sbjct: 812 HGAFINEQDLTSSTALHAAA-----SNDSVTPARFLILNGIEINAQNFDGNTAL-HISSN 865
Query: 166 PGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLR 219
+ ELLL + R E CS + E+ ++ H I LR
Sbjct: 866 KNFTAMAELLLLNGVNVNLRNN-EGCSALHYAVLNNSQEMVQLLLSHGADINLR 918
Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL + + +N R+ + +H +A ++V+ L+ + ++ + G+T LH+
Sbjct: 942 LLLSHSADINARDD-QGKAIIHYAAQLGYLDVVECLI----SQGADVNIVDYEGKTSLHI 996
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV---WYSIRSEDYATVKTLLEYNADC 148
A K L++H A I+AK +G T LH +V +Y D +T K L+ AD
Sbjct: 997 LANYNAKNCCKFLISHRADIKAKTYDGKTALHFAVGKFYY-----DDSTEKLLIFQGADI 1051
Query: 149 SAKDNEGKTPLDHLSNGPGSAKLRELLLW 177
+ KD G TP +L+ S +L+W
Sbjct: 1052 NEKDFHGITP-RYLTRHRRSDCFCNVLMW 1079
Score = 45.4 bits (106), Expect = 0.033, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+N+ N + T LH+++ + VK+L+ ++ ++N ETPLH+A N E
Sbjct: 337 VNKEN-INGDTSLHLASKCKNIQTVKTLIA----HGSKINSKNKNKETPLHLATLNNNIE 391
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
L+ +GA + N T LH + + + V+ +E A+ +A++++ T L
Sbjct: 392 IVNFLIDNGANVNLMTNESQTVLH----NAAMNNNIEFVENFIELGANVNAQNDQKVTAL 447
Query: 160 DHLSNGPGSAKLRELLLWHSEE 181
H + + + ELL+ H +
Sbjct: 448 -HYAAINNNVTIAELLIMHGAD 468
Score = 44.7 bits (104), Expect = 0.054, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 86 ETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN 145
++ LH++ K+ ++ + LL+HG + + NG T LHL+ + ++ TVKTL+ +
Sbjct: 312 DSALHLSVKSNHSQMVEFLLSHGINVNKENINGDTSLHLAS----KCKNIQTVKTLIAHG 367
Query: 146 ADCSAKDNEGKTPLDHLS 163
+ ++K+ +TPL HL+
Sbjct: 368 SKINSKNKNKETPL-HLA 384
>gi|408827924|ref|ZP_11212814.1| ATPase AAA, partial [Streptomyces somaliensis DSM 40738]
Length = 291
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F GNPGTGKT VAR+
Sbjct: 30 GELDALVGLESVKREVRTLTNMIEVGRRRREAGLKAASVRR-HLVFTGNPGTGKTTVARL 88
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 89 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 125
>gi|403225163|gb|AFR24775.1| putative rubisco expression protein [uncultured Pelagomonas]
Length = 291
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
+E ++ +D L+ EL +GL +K ++R+ + +L+D R+ LGL G+ HM+F G+
Sbjct: 15 TEIQSILDILDAEL---IGLKPVKTRIREISALLLIDRLRQKLGL-TGSHPGLHMSFTGS 70
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + +LY + + V R DLVG+++GHT PKT+
Sbjct: 71 PGTGKTTVALKMADILYKLDYSRKGHLMTVTRDDLVGQYIGHTAPKTK 118
>gi|41409876|ref|NP_962712.1| hypothetical protein MAP3778 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|440779232|ref|ZP_20957962.1| hypothetical protein D522_21551 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41398708|gb|AAS06328.1| hypothetical protein MAP_3778 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|436720331|gb|ELP44607.1| hypothetical protein D522_21551 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 617
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLHEAERQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|392397362|ref|YP_006433963.1| AAA ATPase [Flexibacter litoralis DSM 6794]
gi|390528440|gb|AFM04170.1| AAA+ family ATPase [Flexibacter litoralis DSM 6794]
Length = 881
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 60/95 (63%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+N++GL +LK ++ + + + R+ GLK H+ F GNPGTGKT +A+++G
Sbjct: 313 LNNLIGLKDLKKRIHDYTSYLQFTQIRQEKGLKEDKNLNLHLIFKGNPGTGKTTIAQMMG 372
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
++ +G+L T + EV R +L+G+++G T PK +
Sbjct: 373 KIYNHLGLLSTGELHEVGRAELIGQYIGQTAPKVK 407
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +VGL E+K ++ + + L + G V + HM F GNPGTGKT VARIL
Sbjct: 602 ELHALVGLSEVK---KRIDELIALVRFYQQTGRNVLNQFSLHMIFKGNPGTGKTTVARIL 658
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLTFI 315
+ +G+L ++ E R LV FVG T KT+ ++ S I + FI
Sbjct: 659 STIYRALGVLERGQLVECDRQSLVAGFVGQTAIKTQEKIN---SAIGGILFI 707
>gi|379749491|ref|YP_005340312.1| hypothetical protein OCU_47720 [Mycobacterium intracellulare ATCC
13950]
gi|378801855|gb|AFC45991.1| hypothetical protein OCU_47720 [Mycobacterium intracellulare ATCC
13950]
Length = 617
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLHEAERQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|90994419|ref|YP_536909.1| CbbX [Pyropia yezoensis]
gi|122232144|sp|Q1XDQ9.1|CFXQ_PORYE RecName: Full=Protein cfxQ homolog
gi|90818983|dbj|BAE92352.1| unnamed protein product [Pyropia yezoensis]
Length = 300
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 195 KAKMDELENELSN-IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
+ ++ E+ NEL+ ++GL +K ++R+ A +L+D R+ L L V HM+F G+PG
Sbjct: 21 RTQIQEVLNELNQELIGLVPVKTRIREIAALLLIDRLRRKLEL-VSGNPGLHMSFTGSPG 79
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
TGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 80 TGKTTVAMKMADILHRLGYIKKGHLLTVTRDDLVGQYIGHTAPKTK 125
>gi|116072233|ref|ZP_01469500.1| ATPase [Synechococcus sp. BL107]
gi|116064755|gb|EAU70514.1| ATPase [Synechococcus sp. BL107]
Length = 301
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKT 257
++L+ EL +GL +K ++R+ A +L+D+ R+ + L A P HM+F G PGTGKT
Sbjct: 21 EQLDREL---IGLTSVKTRIREIAALLLVDQARQQMDLPSTA--PSLHMSFTGRPGTGKT 75
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA+ + ++L+ +G L V R DLVG++VGHT PKT+ +
Sbjct: 76 TVAQRMSQILHRLGYLRKGHVVTATRDDLVGQYVGHTAPKTKEMI 120
>gi|379764316|ref|YP_005350713.1| hypothetical protein OCQ_48810 [Mycobacterium intracellulare
MOTT-64]
gi|387878165|ref|YP_006308469.1| hypothetical protein W7S_23965 [Mycobacterium sp. MOTT36Y]
gi|443307948|ref|ZP_21037735.1| hypothetical protein W7U_19915 [Mycobacterium sp. H4Y]
gi|378812258|gb|AFC56392.1| hypothetical protein OCQ_48810 [Mycobacterium intracellulare
MOTT-64]
gi|386791623|gb|AFJ37742.1| hypothetical protein W7S_23965 [Mycobacterium sp. MOTT36Y]
gi|442765316|gb|ELR83314.1| hypothetical protein W7U_19915 [Mycobacterium sp. H4Y]
Length = 617
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLHEAERQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|333361289|pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
gi|333361290|pdb|3NOG|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + V TPLH++A + EIV+ LL+ + ++ A + G TPLH
Sbjct: 31 RILMANGADVNASDHV-GWTPLHLAAYFGHLEIVEVLLK----NGADVNADDSLGVTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL +GA + A +NG TPLHL+ V+ LL++ AD +A
Sbjct: 86 LAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIG----HLEIVEVLLKHGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A + G TPLHL+ ++ V+ LL+ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFG----HLEIVEVLLKNGADVNAD 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D+ G TPL HL+ G ++ E+LL
Sbjct: 77 DSLGVTPL-HLAADRGHLEVVEVLL 100
>gi|254818905|ref|ZP_05223906.1| hypothetical protein MintA_03216 [Mycobacterium intracellulare ATCC
13950]
gi|379756791|ref|YP_005345463.1| hypothetical protein OCO_47800 [Mycobacterium intracellulare
MOTT-02]
gi|406033062|ref|YP_006731954.1| AAA ATPase [Mycobacterium indicus pranii MTCC 9506]
gi|378807007|gb|AFC51142.1| hypothetical protein OCO_47800 [Mycobacterium intracellulare
MOTT-02]
gi|405131607|gb|AFS16862.1| ATPase, AAA family protein [Mycobacterium indicus pranii MTCC 9506]
Length = 617
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLHEAERQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|417748270|ref|ZP_12396715.1| type VII secretion AAA-ATPase EccA [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336460189|gb|EGO39093.1| type VII secretion AAA-ATPase EccA [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 610
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 304 AAHERKAVLLHEAERQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 362
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 363 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 422
Query: 309 ITCL 312
+ L
Sbjct: 423 VLFL 426
>gi|119490451|ref|ZP_01622912.1| ATPase [Lyngbya sp. PCC 8106]
gi|119453922|gb|EAW35077.1| ATPase [Lyngbya sp. PCC 8106]
Length = 850
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL-KVGARRPPHMAFLG 250
++ K +++L +L N+ GLH +K +++ + + +++ + GL K H+ F G
Sbjct: 575 TQDKETLEKLLEDLDNLTGLHSVKRAVKQLIEIQIANQKLQEAGLLKTAEIETRHLLFSG 634
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEIT 310
NPGTGKT VAR++GR+ +G+L + E R LVG+++GHT KT + V L +
Sbjct: 635 NPGTGKTTVARLIGRIYRALGLLKKGQFVEADRRQLVGQYIGHTAEKTAQVVESALDGVL 694
Query: 311 CL 312
+
Sbjct: 695 FI 696
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 9/104 (8%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGN 251
TK ++ LE +VGL +K +R+ + + + + R G+ PP H+ F GN
Sbjct: 302 TKPALERLEE----LVGLRGVKDAIRRKMRALEVAQNRAKQGIST---EPPRLHLVFKGN 354
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
PGTGKT VAR++G + +G+L + E DLV E VG T
Sbjct: 355 PGTGKTTVARLIGEIYRDLGLLKRGHLVERGGRDLVAEHVGGTA 398
>gi|312068079|ref|XP_003137045.1| hypothetical protein LOAG_01458 [Loa loa]
Length = 1694
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ +I +LL + N E +A G TPLH+AA+ G E A LL+ +GA
Sbjct: 628 TPLHIAAKKNQMDIASTLLHYRANANAESKA----GFTPLHLAAQEGHREMAALLIENGA 683
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
+ A+A NG+TP+HL ED +V + L++ NA K G TPL H++ G
Sbjct: 684 KVGAQARNGLTPMHLCA-----QEDRVSVAEELVKENATVDPKTKAGYTPL-HVACHFGQ 737
Query: 169 AKLRELLLWHS 179
+ L+ HS
Sbjct: 738 INMVRFLIEHS 748
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y + K LLE V++E +N TPLH+AA ++ A LLL +GA
Sbjct: 562 TPLHLAAKYGNLPVAKLLLER--GTSVDIEGKNQV--TPLHVAAHYNNDKVALLLLENGA 617
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
A A NG TPLH++ + TLL Y A+ +A+ G TPL HL+ G
Sbjct: 618 SAHAAAKNGYTPLHIAA----KKNQMDIASTLLHYRANANAESKAGFTPL-HLAAQEGHR 672
Query: 170 KLRELLL 176
++ LL+
Sbjct: 673 EMAALLI 679
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 42/175 (24%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLHV+ + +A +V LL ++ +++ TPLH A+++G ++ LLL GA
Sbjct: 265 SPLHVATKWGRANMVSLLLAH--GAVIDCRTRDLL--TPLHCASRSGHDQVVDLLLEKGA 320
Query: 110 FIEAKANNGMTPLHLS-----------VWYSIRSEDYATV------------------KT 140
I AK NG+ PLH++ + Y D TV K
Sbjct: 321 PINAKTKNGLAPLHMAAQGDHVDSARILLYHRAPVDDVTVDYLTPLHVAAHCGHVRVAKL 380
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL-WHSEEQRKRRALEACSET 194
LL+ NAD +A+ G TPL H++ K+ ELLL +H+ A+EA +E+
Sbjct: 381 LLDRNADSNARALNGFTPL-HIACKKNRIKVVELLLKYHA-------AIEATTES 427
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLHV+A IV LL+ N V + GETPLH+AA+ + ++L+ +GA
Sbjct: 430 SPLHVAAFMGAINIVIYLLQQGANADV----ATVRGETPLHLAARANQTDIVRVLVRNGA 485
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A A TPLH++ R + V LL+ A +A + TPL H++ G
Sbjct: 486 RVDAAARELQTPLHIAS----RLGNTDIVVLLLQAGASPNAATRDLYTPL-HIAAKEGQE 540
Query: 170 KLRELLLWHSEEQ 182
++ +L+ H ++
Sbjct: 541 EVAAILIDHGTDK 553
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ + + L++EN ++ + TPLHV+ + + +V+ L+E V
Sbjct: 696 MHLCAQEDRVSVAEELVKENATV--DPKTKAGYTPLHVACHFGQINMVRFLIEHSA--PV 751
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+ Y TPLH AA+ G N + LL HGA + G TPL ++
Sbjct: 752 SATTRAFY--TPLHQAAQQGHNNVVRYLLEHGASPNVHTSTGQTPLSIA 798
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ E+V+ LL+ K +++A G T LH+A+ G +L+ +GA +
Sbjct: 73 LHLASKEGHHEVVRELLKR----KADVDAATKKGNTALHIASLAGQELIVTILVENGANV 128
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
++ NG TPL+++ + S V+ LL +NA+ + +G TPL
Sbjct: 129 NVQSLNGFTPLYMAAQENHES----VVRYLLAHNANQALATEDGFTPL 172
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 66/154 (42%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ + IV L+E N V Q++ G TPL+MAA+ + LLAH A
Sbjct: 104 TALHIASLAGQELIVTILVENGANVNV----QSLNGFTPLYMAAQENHESVVRYLLAHNA 159
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D TLL
Sbjct: 160 NQALATEDGFTPLAVALQQGHDRVVALLLENDTRGKVRLPALHIAAKKDDTKAATLLLQN 219
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N+D ++K G TPL H++ G+ + +LLL
Sbjct: 220 EHNSDVTSK--SGFTPL-HIAAHYGNENVAQLLL 250
>gi|360044067|emb|CCD81614.1| putative ankyrin 2,3/unc44 [Schistosoma mansoni]
Length = 2342
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+D R +S PA +H A+ D+ A +LL N + + TPLH++A Y I
Sbjct: 417 RDSRGKSRLPA-LHIAAKKDDVHA-AKLLLNNSEMNVDHTSASGFTPLHIAAHYGNVNIA 474
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
K L+E N + +A+N TPLH+AAK G NE L+ GA + ++ +G+TPLH
Sbjct: 475 KLLIEKGAN--INFQAKNCI--TPLHVAAKCGKNEVVSELILAGAEVNSRTRDGLTPLHC 530
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+ R+ TV+ LL++ AD K G TPL + G +R LL
Sbjct: 531 AS----RAGQTDTVEYLLKHGADHCLKTKNGLTPLHLAAQGANENVVRLLL 577
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 48/195 (24%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNP----VMAQTPLHVSAGYNKAEIVKSLLEWPG 72
+H AQ + + LLR N NP + TPLHV+A ++ + LL
Sbjct: 561 LHLAAQGANENVVRLLLR------NGSNPDDVTIDYLTPLHVAAHCGNVDVARVLL---- 610
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY---- 128
N + A+ + G T LH+A K E A LLL +GA +EA G+TPLH++ ++
Sbjct: 611 NSHCNVNARALNGFTALHIACKKSRVEMASLLLKYGALLEAATETGLTPLHVAAFFGCTE 670
Query: 129 -------------------------SIRSEDYATVKTLLEY--NADCSAKDNEGKTPLDH 161
+ R++ TV+TLL Y N DC +DN+ TPL H
Sbjct: 671 IVSFLLQHGTNVNQTTLRNETALHLAARNKQLETVRTLLGYQANLDCRTRDNQ--TPL-H 727
Query: 162 LSNGPGSAKLRELLL 176
++ + ELLL
Sbjct: 728 VAVRTNYLPIVELLL 742
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TP+HV+ YN +++ L+E+ G+ V +N G TPLH+A K ++ LL++ GA
Sbjct: 824 TPVHVATFYNNNKMLDKLIEFGGD--VNRPVKN--GFTPLHLATKRNHLDSIHLLISKGA 879
Query: 110 FIEAKANNGMTPLHLSVWYSIRSED--YATVKTLLE-YNADCSAKDNEGKTPLDHLSNGP 166
+ + NG TPLHL+ S+D VK L E Y A A +G TPL HL+
Sbjct: 880 ITDKGSRNGYTPLHLA------SQDGQIEIVKVLAEKYKAQVDAAAKDGLTPL-HLAVQE 932
Query: 167 GSAKLRELLL 176
+ E LL
Sbjct: 933 DKVSVAEYLL 942
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A + EIV LL+ N + + ET LH+AA+N E + LL + A
Sbjct: 658 TPLHVAAFFGCTEIVSFLLQHGTN----VNQTTLRNETALHLAARNKQLETVRTLLGYQA 713
Query: 110 FIEAKANNGMTPLHLSV-----------------------------WYSIRSEDYATVKT 140
++ + + TPLH++V +I+ + V+
Sbjct: 714 NLDCRTRDNQTPLHVAVRTNYLPIVELLLNAGSDPNIMTKDNYTPLHVAIKEDSDDIVRI 773
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
L+E++A+ K +G TPL HL+ GS K LL+
Sbjct: 774 LIEHDANPEVKTKKGFTPL-HLAAKYGSCKTAHLLM 808
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A + K LL N ++ ++ + G TPLH+AA G AKLL+ GA I
Sbjct: 428 LHIAAKKDDVHAAKLLL---NNSEMNVDHTSASGFTPLHIAAHYGNVNIAKLLIEKGANI 484
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+A N +TPLH++ + V L+ A+ +++ +G TPL H ++ G
Sbjct: 485 NFQAKNCITPLHVAA----KCGKNEVVSELILAGAEVNSRTRDGLTPL-HCASRAGQTDT 539
Query: 172 RELLLWH 178
E LL H
Sbjct: 540 VEYLLKH 546
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLHV+ N IV+ LL G+D + N TPLH+A K ++ ++L+ H
Sbjct: 723 QTPLHVAVRTNYLPIVELLLNA-GSDPNIMTKDNY---TPLHVAIKEDSDDIVRILIEHD 778
Query: 109 AFIEAKANNGMTPLHLSVWY 128
A E K G TPLHL+ Y
Sbjct: 779 ANPEVKTKKGFTPLHLAAKY 798
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++ + E+V LL + + G +PLH+A+ G E KLL+ HGA I
Sbjct: 300 LHLACKEGRTEVVNELLSHGAS----VHMITRKGNSPLHIASLAGHLEIVKLLVDHGADI 355
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++ NG TPL++S + V+ LL+ +A+ + +G TPL
Sbjct: 356 NAQSQNGFTPLYMSA----QENHVEVVRYLLDKSANQALSTEDGFTPL 399
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+++ + EIVK L E K +++A G TPLH+A + A+ LL+ GA
Sbjct: 890 TPLHLASQDGQIEIVKVLAE---KYKAQVDAAAKDGLTPLHLAVQEDKVSVAEYLLSSGA 946
Query: 110 FIEAKA-NNGMTPLHLSVWYSIRSEDYATVKTLL------EYNADCSAKDNEGKTPLDHL 162
I K G TPLH S + A+V+ LL E +++ + G TPL HL
Sbjct: 947 SINTKTLKAGFTPLHSSAYRG----QLASVRLLLSCVPEHELQQVINSRTHMGSTPL-HL 1001
Query: 163 SNGPG 167
+ G
Sbjct: 1002 AAQQG 1006
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH+++ EIVK L++ G D + AQ+ G TPL+M+A+ E + LL A
Sbjct: 331 SPLHIASLAGHLEIVKLLVDH-GAD---INAQSQNGFTPLYMSAQENHVEVVRYLLDKSA 386
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT--PLDHLSNGPG 167
+G TPL +++ + D + LLE +D+ GK+ P H++
Sbjct: 387 NQALSTEDGFTPLAVALQ---QGHDRV-ISLLLE-------RDSRGKSRLPALHIAAKKD 435
Query: 168 SAKLRELLLWHSE 180
+LLL +SE
Sbjct: 436 DVHAAKLLLNNSE 448
>gi|326439554|ref|ZP_08214288.1| hypothetical protein SclaA2_00760 [Streptomyces clavuligerus ATCC
27064]
Length = 853
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D + EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 563 DAVLGELDGLVGLESVKREVRSLIDMIEVGRRRREAGLKAASVRR-HLVFTGSPGTGKTT 621
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 622 VARLYGEILAALGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 662
>gi|123404694|ref|XP_001302479.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121883771|gb|EAX89549.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 807
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ M T LH +A N+ E + L+ N E NM G+T LH
Sbjct: 428 ELLISHGANINEKDN-MGDTALHSAAKNNRKETAELLISHGANIN---EKDNM-GDTALH 482
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AAKN E A+LL++HGA I K N G T LH + +Y I E T + L+ + A+ +
Sbjct: 483 SAAKNNSKETAELLISHGANINEKDNMGDTALHSAAYY-ISKE---TAELLISHGANINE 538
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH-----SEEQRKRRALEACSETKAK 197
KDN+G+T L H + S + ELL+ H ++ R AL +E +K
Sbjct: 539 KDNDGRTAL-HFAAEYNSKETAELLISHGANINEKDNDGRTALHFAAEYNSK 589
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 79/139 (56%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ M T LH +A N+ E + L+ N E NM G+T LH AAKN E
Sbjct: 635 INEKDN-MGDTALHSAAKNNRKETAELLISHGANIN---EKDNM-GDTALHSAAKNNSKE 689
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HGA I K N G T LH + +Y I E T + L+ + A+ + KDN+G+T L
Sbjct: 690 TAELLISHGANINEKDNMGDTALHSAAYY-ISKE---TAELLISHGANINEKDNDGRTAL 745
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ S ++ +LL+ H
Sbjct: 746 -HIAAENNSEEITKLLISH 763
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G+T LH AAKN NE +LL++HGA I K NN T LH Y+ ++ T + L+ +
Sbjct: 345 GKTALHFAAKNNNNETTELLISHGANINEKDNNEATALH----YAAKNNSKETAEVLISH 400
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
A+ + KD +GKT L H + S + ELL+ H
Sbjct: 401 GANINEKDKDGKTAL-HYAARKNSKETAELLISH 433
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +T LH +A YN E + L+ N + ++ G T LH
Sbjct: 527 ELLISHGANINEKDND-GRTALHFAAEYNSKETAELLISHGAN----INEKDNDGRTALH 581
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E A+LL++HGA I K N+G T LH++ ++ T + L+ + A+ +
Sbjct: 582 FAAEYNSKETAELLISHGANINEKDNDGRTALHIAAEHNSTE----TAEVLISHGANINE 637
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN G T L H + + ELL+ H
Sbjct: 638 KDNMGDTAL-HSAAKNNRKETAELLISH 664
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +T LH++A N EI K L+ N + +N +G+T LH
Sbjct: 725 ELLISHGANINEKDND-GRTALHIAAENNSEEITKLLISHGAN----INEKNKHGKTALH 779
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKAN 116
AA N E AKLL+++GA I N
Sbjct: 780 AAAINNSKETAKLLISYGANINENDN 805
>gi|323457115|gb|EGB12981.1| hypothetical protein AURANDRAFT_19513 [Aureococcus anophagefferens]
Length = 309
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
K ++D+L+ +L VGL +K ++R+ A ++LD+ R+ LG A HM F G PG
Sbjct: 22 VKDQLDKLDYDL---VGLLPVKQRVREIAALLVLDKMRRKLGFDT-AVPSLHMCFTGAPG 77
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
TGKT VA +G++L +G + V R DLVG++VGHT PKT+ + L
Sbjct: 78 TGKTTVAVRMGQILAKMGYCRSGHVVVATRDDLVGQYVGHTAPKTKEVIKQAL 130
>gi|256081928|ref|XP_002577218.1| ankyrin 23/unc44 [Schistosoma mansoni]
Length = 2657
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+D R +S PA +H A+ D+ A +LL N + + TPLH++A Y I
Sbjct: 417 RDSRGKSRLPA-LHIAAKKDDVHA-AKLLLNNSEMNVDHTSASGFTPLHIAAHYGNVNIA 474
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
K L+E N + +A+N TPLH+AAK G NE L+ GA + ++ +G+TPLH
Sbjct: 475 KLLIEKGAN--INFQAKNCI--TPLHVAAKCGKNEVVSELILAGAEVNSRTRDGLTPLHC 530
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+ R+ TV+ LL++ AD K G TPL + G +R LL
Sbjct: 531 AS----RAGQTDTVEYLLKHGADHCLKTKNGLTPLHLAAQGANENVVRLLL 577
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 87/195 (44%), Gaps = 48/195 (24%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNP----VMAQTPLHVSAGYNKAEIVKSLLEWPG 72
+H AQ + + LLR N NP + TPLHV+A ++ + LL
Sbjct: 561 LHLAAQGANENVVRLLLR------NGSNPDDVTIDYLTPLHVAAHCGNVDVARVLL---- 610
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY---- 128
N + A+ + G T LH+A K E A LLL +GA +EA G+TPLH++ ++
Sbjct: 611 NSHCNVNARALNGFTALHIACKKSRVEMASLLLKYGALLEAATETGLTPLHVAAFFGCTE 670
Query: 129 -------------------------SIRSEDYATVKTLLEY--NADCSAKDNEGKTPLDH 161
+ R++ TV+TLL Y N DC +DN+ TPL H
Sbjct: 671 IVSFLLQHGTNVNQTTLRNETALHLAARNKQLETVRTLLGYQANLDCRTRDNQ--TPL-H 727
Query: 162 LSNGPGSAKLRELLL 176
++ + ELLL
Sbjct: 728 VAVRTNYLPIVELLL 742
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TP+HV+ YN +++ L+E+ G+ V +N G TPLH+A K ++ LL++ GA
Sbjct: 824 TPVHVATFYNNNKMLDKLIEFGGD--VNRPVKN--GFTPLHLATKRNHLDSIHLLISKGA 879
Query: 110 FIEAKANNGMTPLHLSVWYSIRSED--YATVKTLLE-YNADCSAKDNEGKTPLDHLSNGP 166
+ + NG TPLHL+ S+D VK L E Y A A +G TPL HL+
Sbjct: 880 ITDKGSRNGYTPLHLA------SQDGQIEIVKVLAEKYKAQVDAAAKDGLTPL-HLAVQE 932
Query: 167 GSAKLRELLL 176
+ E LL
Sbjct: 933 DKVSVAEYLL 942
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A + EIV LL+ N + + ET LH+AA+N E + LL + A
Sbjct: 658 TPLHVAAFFGCTEIVSFLLQHGTN----VNQTTLRNETALHLAARNKQLETVRTLLGYQA 713
Query: 110 FIEAKANNGMTPLHLSV-----------------------------WYSIRSEDYATVKT 140
++ + + TPLH++V +I+ + V+
Sbjct: 714 NLDCRTRDNQTPLHVAVRTNYLPIVELLLNAGSDPNIMTKDNYTPLHVAIKEDSDDIVRI 773
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
L+E++A+ K +G TPL HL+ GS K LL+
Sbjct: 774 LIEHDANPEVKTKKGFTPL-HLAAKYGSCKTAHLLM 808
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A + K LL N ++ ++ + G TPLH+AA G AKLL+ GA I
Sbjct: 428 LHIAAKKDDVHAAKLLL---NNSEMNVDHTSASGFTPLHIAAHYGNVNIAKLLIEKGANI 484
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+A N +TPLH++ + V L+ A+ +++ +G TPL H ++ G
Sbjct: 485 NFQAKNCITPLHVAA----KCGKNEVVSELILAGAEVNSRTRDGLTPL-HCASRAGQTDT 539
Query: 172 RELLLWH 178
E LL H
Sbjct: 540 VEYLLKH 546
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLHV+ N IV+ LL G+D + N TPLH+A K ++ ++L+ H
Sbjct: 723 QTPLHVAVRTNYLPIVELLLNA-GSDPNIMTKDNY---TPLHVAIKEDSDDIVRILIEHD 778
Query: 109 AFIEAKANNGMTPLHLSVWY 128
A E K G TPLHL+ Y
Sbjct: 779 ANPEVKTKKGFTPLHLAAKY 798
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++ + E+V LL + + G +PLH+A+ G E KLL+ HGA I
Sbjct: 300 LHLACKEGRTEVVNELLSHGAS----VHMITRKGNSPLHIASLAGHLEIVKLLVDHGADI 355
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++ NG TPL++S + V+ LL+ +A+ + +G TPL
Sbjct: 356 NAQSQNGFTPLYMSA----QENHVEVVRYLLDKSANQALSTEDGFTPL 399
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+++ + EIVK L E K +++A G TPLH+A + A+ LL+ GA
Sbjct: 890 TPLHLASQDGQIEIVKVLAE---KYKAQVDAAAKDGLTPLHLAVQEDKVSVAEYLLSSGA 946
Query: 110 FIEAKA-NNGMTPLHLSVWYSIRSEDYATVKTLL------EYNADCSAKDNEGKTPLDHL 162
I K G TPLH S + A+V+ LL E +++ + G TPL HL
Sbjct: 947 SINTKTLKAGFTPLHSSAYRG----QLASVRLLLSCVPEHELQQVINSRTHMGSTPL-HL 1001
Query: 163 SNGPG 167
+ G
Sbjct: 1002 AAQQG 1006
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH+++ EIVK L++ G D + AQ+ G TPL+M+A+ E + LL A
Sbjct: 331 SPLHIASLAGHLEIVKLLVDH-GAD---INAQSQNGFTPLYMSAQENHVEVVRYLLDKSA 386
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT--PLDHLSNGPG 167
+G TPL +++ + D + LLE +D+ GK+ P H++
Sbjct: 387 NQALSTEDGFTPLAVALQ---QGHDRV-ISLLLE-------RDSRGKSRLPALHIAAKKD 435
Query: 168 SAKLRELLLWHSE 180
+LLL +SE
Sbjct: 436 DVHAAKLLLNNSE 448
>gi|223999031|ref|XP_002289188.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974396|gb|EED92725.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 411
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTG 255
++D+L+N+L VGL +K ++++ A ++LD+ R+ LG + P HM+F G PGTG
Sbjct: 125 QLDKLDNDL---VGLLAVKRRVKEIAALLVLDKMRRKLGFETSV--PSLHMSFTGAPGTG 179
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT VA +G++L +G V R DLVG++VGHT PKT+ +
Sbjct: 180 KTTVAVRMGQILAKMGYARRGHVVLATRDDLVGQYVGHTAPKTKEMI 226
>gi|456357409|dbj|BAM91854.1| putative CbbX-like protein, containing AAA-ATPase domain [Agromonas
oligotrophica S58]
Length = 314
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ + +++L+ EL VGL +K ++R+ A +L++ R+ +GL A P
Sbjct: 21 RREFESV-DIAPVLEQLDREL---VGLAPVKTRIREIASLLLMERIRQKMGL---ATTFP 73
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 74 TLHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 130
>gi|448928455|gb|AGE52026.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus CVM-1]
Length = 296
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LL+
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLLK----HGA 55
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 56 HIDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D + L+E+ AD SAKD++G TPL
Sbjct: 111 --ASDGDVARMLIEHGADISAKDSDGCTPL 138
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 30/146 (20%)
Query: 50 TPLHVSAGYNKAEIVK--------------SLLEWPGNDKV---------ELEAQNMYGE 86
TPLH+++ + A ++ + L W GN+ + ++ A++ +G
Sbjct: 106 TPLHIASDGDVARMLIEHGADISAKDSDGCTPLYWAGNECIARLLTAHGSDVSAKDRHGY 165
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH A + G + A++LL H + A+ +G TPLH++ S R Y V+ LLE+ A
Sbjct: 166 TPLHHA-RTG--DIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRVLLEHGA 218
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLR 172
D AKDN+G+ P +H S LR
Sbjct: 219 DIRAKDNDGRMPFEHWDPKQRSQFLR 244
>gi|373248720|emb|CCD31833.1| sporulation protein K-like protein [Streptomyces albus subsp.
albus]
Length = 808
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RRK GLK + R H+ F G+PGTGKT VAR+
Sbjct: 547 GELDALVGLESVKREVRALTDMIEVGRRRKEAGLKAASVRR-HLVFTGSPGTGKTTVARL 605
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
G +L +G+L + EV R DLVGE +G T +T++
Sbjct: 606 YGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQQ 643
>gi|410456206|ref|ZP_11310072.1| stage V sporulation protein K [Bacillus bataviensis LMG 21833]
gi|409928385|gb|EKN65497.1| stage V sporulation protein K [Bacillus bataviensis LMG 21833]
Length = 775
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 65/108 (60%), Gaps = 4/108 (3%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
++L+N++G+ +K ++ + + + ++RK LG ++ +M GNPGTGKT +AR+
Sbjct: 238 DQLNNMIGMELVKKRVNDFYQFLKYQKQRKELGFQIKDELSLNMILTGNPGTGKTTLARL 297
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR----RRVGHLL 306
+ ++ + +G+LP + V E R+ LVG FVG T R R +G +L
Sbjct: 298 MAKIYHELGVLPREEVIETDRSQLVGSFVGQTEENVRSIVERSIGGVL 345
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
ET+ + + +L+ ++GL LK ++R + + + R+ GL + H F GNP
Sbjct: 503 ETENSTESPQEKLNRLIGLESLKEEMRTLVSFVKIQQFRRKKGLPTVPIQL-HSVFTGNP 561
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
GTGKT VA+I L G+L + R D V +VG T KTR+++ L
Sbjct: 562 GTGKTTVAKIYAEFLKECGMLKRGHLIVASRADFVAGYVGQTAAKTRKKIKEAL 615
>gi|358397779|gb|EHK47147.1| hypothetical protein TRIATDRAFT_239629 [Trichoderma atroviride IMI
206040]
Length = 533
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
RLL + + +N +N + +TPLH + + EI+ LL G + +N YGE PL+
Sbjct: 348 RLLLDAGANVNTKN-MWGETPLHTTV-TRRIEIITRLLLKAG---ASVNIKNNYGEAPLY 402
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+A G AA+LLL GA + K N G TPLH + ++ Y V LLE AD A
Sbjct: 403 IAVTRGIETAARLLLEFGADVNIKDNRGKTPLH----QACSAKSYFLVNLLLENGADIDA 458
Query: 151 KDNEGKTPLDHLSNG 165
KD EG+TPL + G
Sbjct: 459 KDQEGETPLHKAARG 473
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 53/121 (43%), Gaps = 30/121 (24%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV------------------ 126
G+TPLH+AAK EA +LLL GA + K G TPLH +V
Sbjct: 331 GKTPLHIAAKQQHEEATRLLLDAGANVNTKNMWGETPLHTTVTRRIEIITRLLLKAGASV 390
Query: 127 -----------WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+ ++ + LLE+ AD + KDN GKTPL H + S L LL
Sbjct: 391 NIKNNYGEAPLYIAVTRGIETAARLLLEFGADVNIKDNRGKTPL-HQACSAKSYFLVNLL 449
Query: 176 L 176
L
Sbjct: 450 L 450
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
++EA+N E+PLH A G +LLL GA IEAK N +PL ++V + ++
Sbjct: 7 ADIEAKNKNNESPLHCAVAEGYTAIIELLLKAGADIEAKNKNNESPLFIAV----QKKNE 62
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ +K LL+ AD K+ + ++ L ++ GS + ++LL
Sbjct: 63 SIIKMLLKAGADVQTKNTDDESLL-FIAACNGSKDIIKMLL 102
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
++PL ++ I+K LL+ G D ++ +N E+ L +AA NG + K+LL G
Sbjct: 50 ESPLFIAVQKKNESIIKMLLK-AGAD---VQTKNTDDESLLFIAACNGSKDIIKMLLHAG 105
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A IE K N + L ++V S +K LLE AD + K EGK+ L
Sbjct: 106 AKIEVKNKNDGSLLFIAVQEKYES---TFIKMLLEAGADANVKGREGKSAL 153
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 28 AFQRLLRENPSLLNERN-----PVMA--QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A LLR++ + +NER+ P++ P + GY+ LL G D A
Sbjct: 237 AVAELLRKDAASINERDDRGWTPLLCAMNAPNELHDGYDWWIAAVELLIRNGADA---NA 293
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
Q GE LH A+ A +LLL GA K N G TPLH++ + + +
Sbjct: 294 QTSGGEASLHFTAQQQHKGATRLLLDAGAGANIKDNCGKTPLHIAA----KQQHEEATRL 349
Query: 141 LLEYNADCSAKDNEGKTPL 159
LL+ A+ + K+ G+TPL
Sbjct: 350 LLDAGANVNTKNMWGETPL 368
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 17/115 (14%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
RLL E + +N ++ +TPLH + +V LLE + +++A++ GETPLH
Sbjct: 414 RLLLEFGADVNIKDN-RGKTPLHQACSAKSYFLVNLLLE----NGADIDAKDQEGETPLH 468
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV-----------WYSIRSED 134
AA+ N + +LL+++ A +++K NNG+T L ++ WY+ ++ D
Sbjct: 469 KAARGDLN-SVELLISNKANLQSKNNNGLTALEIAQNQLTKVAPGRRWYTQKTID 522
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 103 LLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY-ATVKTLLEYNADCSAKDNEGKTPL 159
+LL GA IEAK N +PLH +V +E Y A ++ LL+ AD AK+ ++PL
Sbjct: 1 MLLKAGADIEAKNKNNESPLHCAV-----AEGYTAIIELLLKAGADIEAKNKNNESPL 53
>gi|357029127|ref|ZP_09091136.1| AAA ATPase, central region [Mesorhizobium amorphae CCNWGS0123]
gi|355536265|gb|EHH05540.1| AAA ATPase, central region [Mesorhizobium amorphae CCNWGS0123]
Length = 362
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+DE+ EL + G +K +++K + + R+ G+ PP H+ FLGNPGTG
Sbjct: 82 LDEVLAELDTMTGWRSVKAEVKKLVAVLQAERERRRHGINTA---PPSLHLIFLGNPGTG 138
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
KT AR++G +L+ +G+L + V EV R+ LV +VG T KTR+ +
Sbjct: 139 KTTAARLMGEILFTLGLLRSGHVVEVDRSQLVAGYVGQTAIKTRQVI 185
>gi|358255070|dbj|GAA56772.1| ankyrin [Clonorchis sinensis]
Length = 922
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+ + LL N +LE G TPLH+A K+ E A+LLL+HGA
Sbjct: 576 TPLHLAAKGNHTEVCQLLL----NSGAQLETITRSGFTPLHLAIKHSSLETARLLLSHGA 631
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ + NG+TPLHL+ Y V+ LLE+ AD A+ G TPL
Sbjct: 632 DVNSSGRNGLTPLHLATHYG----SLVLVQDLLEHRADPLAQAKNGFTPL 677
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 17 IHGCAQSGDLLAFQRLL--RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
+H G L+ Q LL R +P L +N TPLH++A +I K LL
Sbjct: 644 LHLATHYGSLVLVQDLLEHRADP-LAQAKNGF---TPLHIAAEKRFIDIAKLLLTNVDRA 699
Query: 75 KV-ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSE 133
K +E++N G TPLH+A ++G KLLLA GA + ++A NG+TP+HL+ E
Sbjct: 700 KACNMESRN--GFTPLHLACQDGSVAMTKLLLASGAQVNSRAKNGLTPMHLAA-----QE 752
Query: 134 DYATVKTLL-EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
D TLL + ++ AK G TPL H + G A + LL
Sbjct: 753 DSHEAATLLYDAGSELDAKTKAGYTPL-HTACHFGQANMVRFLL 795
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV++ IV LL+ N A + ET LH+A + G E A+LLL +GA
Sbjct: 477 TPLHVASFMGHISIVVLLLQHGANPN----APTIRSETALHLATRAGQTEVARLLLRNGA 532
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++ +A T LH++ R + V LLE++A A + TPL HL+
Sbjct: 533 LVDGRARGHQTALHIAA----RMGNVDLVTVLLEHSAHVQAATKDTYTPL-HLAAKGNHT 587
Query: 170 KLRELLL 176
++ +LLL
Sbjct: 588 EVCQLLL 594
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 9/125 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A + + LL N V ++ Q+ G TPLH+AA G +LL+A GA I
Sbjct: 248 LHIAAKKDDVKAANLLL----NSDVNVDHQSASGFTPLHIAAHYGNVNMTELLIARGANI 303
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+A N +TPLH++ + ++ + L+ A+ + +G TPL H + G +
Sbjct: 304 NFQAKNNITPLHVACKWG----NHGVAERLIAAGAELDCRTRDGLTPL-HCAARSGHDTV 358
Query: 172 RELLL 176
LLL
Sbjct: 359 VHLLL 363
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 90/230 (39%), Gaps = 64/230 (27%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D R + PA +H A+ D+ A LL + ++ + TPLH++A Y + +
Sbjct: 238 DSRGKVCLPA-LHIAAKKDDVKAANLLLNSDVNV--DHQSASGFTPLHIAAHYGNVNMTE 294
Query: 66 SLL---------------------EWPGNDKV---------ELEAQNMYGETPLHMAAKN 95
L+ +W GN V EL+ + G TPLH AA++
Sbjct: 295 LLIARGANINFQAKNNITPLHVACKW-GNHGVAERLIAAGAELDCRTRDGLTPLHCAARS 353
Query: 96 GCNEAAKLLLAHGAFIEAKANNGMTPLHLSVW----------------YSIRSEDYAT-- 137
G + LLL+ A + AK +G+ LH++ + DY T
Sbjct: 354 GHDTVVHLLLSSNATVNAKTKSGLNALHMTAQGDHVDAARILLQRGLPLDEVTIDYLTAL 413
Query: 138 -----------VKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
K LLE D +A+ G TPL H++ K+ ELLL
Sbjct: 414 HVASHCGNVQMAKLLLERGCDVNARALNGFTPL-HIACQKNRIKIVELLL 462
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 19/135 (14%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + + +A +V+ LL +V++ AQ G LH+AA+ G + +LL GA
Sbjct: 777 TPLHTACHFGQANMVRFLL----GKRVDVNAQTCMGSNALHLAAQQGHAKVVYILLESGA 832
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADC----SAKDNEGKTPLDHLSNG 165
+ TP H++ R + Y + +L C A+D +P L +G
Sbjct: 833 NPNMRNKYNWTPAHVA-----RRQHYLNIFEVLRQVTTCVESWEAEDEIMGSPTMELDSG 887
Query: 166 ------PGSAKLREL 174
PGS L EL
Sbjct: 888 KGQLQAPGSRHLLEL 902
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 30/152 (19%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ + E+VK LL+ V +AQN G TPL+MAA+ E KLLL+ A
Sbjct: 151 TALHIASLAGQFEVVKMLLD--AGASVNTQAQN--GFTPLYMAAQENHLEVVKLLLSKEA 206
Query: 110 FIEAKANNGMTPLHLSVW-------------------------YSIRSEDYATVKTLLEY 144
++G TPL +++ + + +D LL
Sbjct: 207 NPALTTDDGFTPLAVALQQGHDRIVALLLENDSRGKVCLPALHIAAKKDDVKAANLLLNS 266
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ + + G TPL H++ G+ + ELL+
Sbjct: 267 DVNVDHQSASGFTPL-HIAAHYGNVNMTELLI 297
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ E+ + LL G D + G T LH+A+ G E K+LL GA +
Sbjct: 120 LHLASKEGHVEVARELLSR-GADPNRATKK---GNTALHIASLAGQFEVVKMLLDAGASV 175
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+A NG TPL+++ + VK LL A+ + ++G TPL
Sbjct: 176 NTQAQNGFTPLYMAA----QENHLEVVKLLLSKEANPALTTDDGFTPL 219
>gi|189502104|ref|YP_001957821.1| hypothetical protein Aasi_0703 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497545|gb|ACE06092.1| hypothetical protein Aasi_0703 [Candidatus Amoebophilus asiaticus
5a2]
Length = 762
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y IVK L++ G D + A+N +TPLH+AA G KLL+ GA
Sbjct: 281 TPLHLAAAYGYPSIVKLLIK-KGAD---INAKNTDDDTPLHLAAAYGYPSIVKLLIKKGA 336
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK + TPLHL+ Y S VK L++ AD +AKD + TPL HL+ G
Sbjct: 337 DINAKNTDDDTPLHLAAVYGYPS----IVKLLIKKGADINAKDKDDDTPL-HLAAAYGYP 391
Query: 170 KLRELLL 176
+ +LL+
Sbjct: 392 SIVKLLI 398
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH+++G E+VK LL+ + +N TPLH+AA G KLL+ G
Sbjct: 247 KTPLHIASGQGHKELVKLLLQLGA----DTHKKNKDDNTPLHLAAAYGYPSIVKLLIKKG 302
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK + TPLHL+ Y S VK L++ AD +AK+ + TPL HL+ G
Sbjct: 303 ADINAKNTDDDTPLHLAAAYGYPS----IVKLLIKKGADINAKNTDDDTPL-HLAAVYGY 357
Query: 169 AKLRELLL 176
+ +LL+
Sbjct: 358 PSIVKLLI 365
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y IVK L+E G D + A+ G++PLH+AA G +LLL GA
Sbjct: 380 TPLHLAAAYGYPSIVKLLIE-KGAD---VNAKGEDGQSPLHLAAGRGHINVIELLLEKGA 435
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I K G P+H ++ + + +K LL+ AD +AK EG + L S G
Sbjct: 436 NINIKEKGGGLPVH----FAAVNGNLEVLKLLLQKGADINAKTKEGPSLLG-FSAAFGHL 490
Query: 170 KLRELLL 176
++ + LL
Sbjct: 491 EIVDFLL 497
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
++L A N +TPLH+A+ G E KLLL GA K + TPLHL+ Y S
Sbjct: 237 LDLNACNNKRKTPLHIASGQGHKELVKLLLQLGADTHKKNKDDNTPLHLAAAYGYPS--- 293
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
VK L++ AD +AK+ + TPL HL+ G + +LL+
Sbjct: 294 -IVKLLIKKGADINAKNTDDDTPL-HLAAAYGYPSIVKLLI 332
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL + + +N +N PLH ++ E +K LLE E+ A G TPL
Sbjct: 590 KLLLDKGADVNVKNK-SGVVPLHAASEGGNIETIKLLLERVA----EVNANEETGYTPLD 644
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A + G E AKLLL GA I K + LH W ++ VK LLE AD A
Sbjct: 645 CATQKGHTEVAKLLLEKGADIHVKDEVSQSALH---WAVLKGR-VGVVKLLLEQGADIQA 700
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
K+ +G+T H + G ++ +LL+
Sbjct: 701 KNIDGETSF-HWACQKGHLEVAKLLI 725
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 10/144 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ G++ +LL E + +N N TPL + E+ K LLE G D
Sbjct: 610 LHAASEGGNIETI-KLLLERVAEVN-ANEETGYTPLDCATQKGHTEVAKLLLE-KGAD-- 664
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ ++ ++ LH A G KLLL GA I+AK +G T H ++ +
Sbjct: 665 -IHVKDEVSQSALHWAVLKGRVGVVKLLLEQGADIQAKNIDGETSFH----WACQKGHLE 719
Query: 137 TVKTLLEYNADCSAKDNEGKTPLD 160
K L++ AD +AKD GKTP+D
Sbjct: 720 VAKLLIQNGADINAKDKYGKTPID 743
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + + E+V LL ++ AQN+ G + LH+ ++ E KLLL GA
Sbjct: 542 TLLHWATQEGQVEMVGLLLARGA----DIHAQNIEGSSALHITSQGWHTEIVKLLLDKGA 597
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ K +G+ PLH + + T+K LLE A+ +A + G TPLD + G
Sbjct: 598 DVNVKNKSGVVPLHAAS----EGGNIETIKLLLERVAEVNANEETGYTPLD-CATQKGHT 652
Query: 170 KLRELLL 176
++ +LLL
Sbjct: 653 EVAKLLL 659
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
CA +LL E + ++ ++ V +Q+ LH + + +VK LLE +++
Sbjct: 645 CATQKGHTEVAKLLLEKGADIHVKDEV-SQSALHWAVLKGRVGVVKLLLEQGA----DIQ 699
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A+N+ GET H A + G E AKLL+ +GA I AK G TP+ ++ R + Y ++
Sbjct: 700 AKNIDGETSFHWACQKGHLEVAKLLIQNGADINAKDKYGKTPIDIA-----RQKKYKALE 754
Query: 140 TLL 142
+L
Sbjct: 755 EML 757
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 67/154 (43%), Gaps = 31/154 (20%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
Q+PLH++AG +++ LLE N ++ + G P+H AA NG E KLLL G
Sbjct: 412 QSPLHLAAGRGHINVIELLLEKGANINIKEKG----GGLPVHFAAVNGNLEVLKLLLQKG 467
Query: 109 AFIEAKANNGMTPLHLSVWY-------------SIRSEDYAT-------------VKTLL 142
A I AK G + L S + + + Y T VK LL
Sbjct: 468 ADINAKTKEGPSLLGFSAAFGHLEIVDFLLEKGAEIHDGYCTGIYEAAACGHLEIVKLLL 527
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ D +AKD G T L H + G ++ LLL
Sbjct: 528 KRGLDVNAKDKNGWTLL-HWATQEGQVEMVGLLL 560
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T ++ +A EIVK LL+ +++ A++ G T LH A + G E LLLA GA
Sbjct: 509 TGIYEAAACGHLEIVKLLLKRG----LDVNAKDKNGWTLLHWATQEGQVEMVGLLLARGA 564
Query: 110 FIEAKANNGMTPLHLSV--WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
I A+ G + LH++ W++ VK LL+ AD + K+ G PL S G
Sbjct: 565 DIHAQNIEGSSALHITSQGWHT------EIVKLLLDKGADVNVKNKSGVVPLHAASEGGN 618
Query: 168 SAKLRELL 175
++ LL
Sbjct: 619 IETIKLLL 626
>gi|123452981|ref|XP_001314547.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121897077|gb|EAY02209.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 363
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 20/158 (12%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDKVEL 78
C+Q +L +F L + N+ N A +P H+S SLLE+ ++ ++
Sbjct: 12 CSQYNNLQSFLVYLDQ----TNDINTCFACSPNFHLS----------SLLEYFISNGADI 57
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
A+N YG TPLH AA N E A++L+++GA I AK +G TPLH Y+ + T
Sbjct: 58 NAKNEYGCTPLHYAASNNSKETAEILISNGADINAKDKDGCTPLH----YAASNNRKETA 113
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ L+ AD AKD +G TPL H + + E+L+
Sbjct: 114 EILISNGADIDAKDKDGCTPL-HYAASNNRKETAEILI 150
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N+ E + L+ + ++ A+N YG TPLH AA N E A++L+++GA
Sbjct: 231 TPLHYAASNNRKETAEILIS----NGADINAKNEYGCTPLHYAASNNSKETAEILISNGA 286
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK G TPLH Y+ + T + L+ AD KD +G PL H + S
Sbjct: 287 DINAKNEYGCTPLH----YAASNNSKETAEILISNGADVDTKDKDGCIPL-HYAASNNSK 341
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 342 ETAEILI 348
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A N E + L+ + ++ A+N YG TPLH
Sbjct: 246 EILISNGADINAKNE-YGCTPLHYAASNNSKETAEILIS----NGADINAKNEYGCTPLH 300
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA N E A++L+++GA ++ K +G PLH Y+ + T + L+ AD +A
Sbjct: 301 YAASNNSKETAEILISNGADVDTKDKDGCIPLH----YAASNNSKETAEILISNGADINA 356
Query: 151 KDNEGKT 157
KD +G+T
Sbjct: 357 KDRDGRT 363
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N+ E + L+ + +++A++ G TPLH AA N E A++L+++GA
Sbjct: 99 TPLHYAASNNRKETAEILIS----NGADIDAKDKDGCTPLHYAASNNRKETAEILISNGA 154
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK +G PLH Y+ + T + L+ AD +AKD +G PL H +
Sbjct: 155 DVDAKDKDGCIPLH----YAASNNRKETAEILISNGADINAKDKDGCIPL-HYAASNNRK 209
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 210 ETAEILI 216
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH +A N+ E + L+ + +++A++ G TPLH AA N E A++L+++GA
Sbjct: 199 PLHYAASNNRKETAEILIS----NGADVDAKDKDGCTPLHYAASNNRKETAEILISNGAD 254
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
I AK G TPLH Y+ + T + L+ AD +AK+ G TPL H + S +
Sbjct: 255 INAKNEYGCTPLH----YAASNNSKETAEILISNGADINAKNEYGCTPL-HYAASNNSKE 309
Query: 171 LRELLL 176
E+L+
Sbjct: 310 TAEILI 315
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH +A N+ E + L+ + ++ A++ G PLH AA N E A++L+++GA
Sbjct: 166 PLHYAASNNRKETAEILIS----NGADINAKDKDGCIPLHYAASNNRKETAEILISNGAD 221
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
++AK +G TPLH Y+ + T + L+ AD +AK+ G TPL H + S +
Sbjct: 222 VDAKDKDGCTPLH----YAASNNRKETAEILISNGADINAKNEYGCTPL-HYAASNNSKE 276
Query: 171 LRELLL 176
E+L+
Sbjct: 277 TAEILI 282
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 18 HGC-----AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPG 72
+GC A S + +L N + +N +N TPLH +A N E + L+
Sbjct: 261 YGCTPLHYAASNNSKETAEILISNGADINAKNE-YGCTPLHYAASNNSKETAEILIS--- 316
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
+ +++ ++ G PLH AA N E A++L+++GA I AK +G T
Sbjct: 317 -NGADVDTKDKDGCIPLHYAASNNSKETAEILISNGADINAKDRDGRT 363
>gi|123482602|ref|XP_001323837.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121906709|gb|EAY11614.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 809
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 81/139 (58%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH+++ YN EI+K LL N + ++ +G+TPLH+AA+ E
Sbjct: 412 INEKDN-YGKTALHIASNYNYKEILKLLLSHGAN----INEKDDHGKTPLHVAAQCNKKE 466
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+A++LL+HGA I K +G T LH++ Y+ + +K LL + A+ + KD +G L
Sbjct: 467 SAEILLSHGANINEKDKDGKTALHIAADYNYKE----ILKLLLSHGANINEKDKDGSAAL 522
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ +L ELLL H
Sbjct: 523 -HIAARYNKIELAELLLSH 540
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 14 PATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGN 73
A +H AQ + LL + + +NE++ +T LH++ Y + E K LL N
Sbjct: 585 SAALHIAAQYNKI-ELAELLLSHGANINEKDK-DGKTALHIAVLYYRIETAKLLLSHGAN 642
Query: 74 DKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSE 133
+ ++ G T LH+A E +LLL HGA I K +G T LH++V Y R E
Sbjct: 643 ----INEKDKDGRTALHIAVNYNYKEILELLLLHGANINEKDKDGSTALHIAVLY-YRIE 697
Query: 134 DYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
T K LL + + KD +GKTP H++ +L ELLL H
Sbjct: 698 ---TAKLLLSIGVNINEKDKDGKTPF-HIAAQYNKKELAELLLSH 738
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ T LH++ Y + E K LL V + ++ G+TP H+AA+ E
Sbjct: 676 INEKDK-DGSTALHIAVLYYRIETAKLLLSIG----VNINEKDKDGKTPFHIAAQYNKKE 730
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LLL+HGA I K +G TPLH+ +++ + + L+ + A+ + KDN G T L
Sbjct: 731 LAELLLSHGANINEKDKDGKTPLHILAFHNNKE----IAEHLIAHGANINEKDNYGNTAL 786
Query: 160 DHLSNGPGSAKLRELLLWHS 179
H++ + K E+LL +S
Sbjct: 787 -HIAAFYNNNKKVEVLLSYS 805
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T L+++A E+V+ L+ N + ++ YG+T LH+A+ E
Sbjct: 379 INEKDK-DGKTALYIAAECQSKEMVEHLIAHGAN----INEKDNYGKTALHIASNYNYKE 433
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
KLLL+HGA I K ++G TPLH++ + + + + LL + A+ + KD +GKT L
Sbjct: 434 ILKLLLSHGANINEKDDHGKTPLHVAAQCNKKE----SAEILLSHGANINEKDKDGKTAL 489
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ ++ +LLL H
Sbjct: 490 -HIAADYNYKEILKLLLSH 507
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 9/107 (8%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +TP H++A YNK E+ + LL N + ++ G+TPLH+ A + E
Sbjct: 709 INEKDK-DGKTPFHIAAQYNKKELAELLLSHGAN----INEKDKDGKTPLHILAFHNNKE 763
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
A+ L+AHGA I K N G T LH++ +Y+ + V+ LL Y++
Sbjct: 764 IAEHLIAHGANINEKDNYGNTALHIAAFYNNNKK----VEVLLSYSS 806
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL + + +NE++ LH++A YNK E+ + LL N + ++ G+T LH
Sbjct: 502 KLLLSHGANINEKDK-DGSAALHIAARYNKIELAELLLSHGAN----INEKDKDGKTALH 556
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA E KLLL+HGA I K +G LH++ Y+ + LL + A+ +
Sbjct: 557 IAADYNYKEILKLLLSHGANINEKDKDGSAALHIAAQYN----KIELAELLLSHGANINE 612
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KD +GKT L H++ + +LLL H
Sbjct: 613 KDKDGKTAL-HIAVLYYRIETAKLLLSH 639
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + N I + LL + ++ + YG+T LH AA+N E A + +GA
Sbjct: 322 TPLHYATKLNNKVIGEFLLSYGA----DINEKGYYGKTVLHYAAENNNKEIADFFILYGA 377
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I K +G T L+++ + V+ L+ + A+ + KDN GKT L H+++
Sbjct: 378 NINEKDKDGKTALYIAA----ECQSKEMVEHLIAHGANINEKDNYGKTAL-HIASNYNYK 432
Query: 170 KLRELLLWH 178
++ +LLL H
Sbjct: 433 EILKLLLSH 441
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVE-LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
+H + +++ + LL +V ++ +NM TPLH A K + LL++GA
Sbjct: 289 IHFACKSQNSDVCRVLLASCNKFRVNCMDNKNM---TPLHYATKLNNKVIGEFLLSYGAD 345
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
I K G T LH Y+ + + + Y A+ + KD +GKT L +++ S +
Sbjct: 346 INEKGYYGKTVLH----YAAENNNKEIADFFILYGANINEKDKDGKTAL-YIAAECQSKE 400
Query: 171 LRELLLWH 178
+ E L+ H
Sbjct: 401 MVEHLIAH 408
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +TPLH+ A +N EI + L+ N + ++ YG T LH
Sbjct: 733 ELLLSHGANINEKDK-DGKTPLHILAFHNNKEIAEHLIAHGAN----INEKDNYGNTALH 787
Query: 91 MAAKNGCNEAAKLLLAHGAFI 111
+AA N+ ++LL++ + I
Sbjct: 788 IAAFYNNNKKVEVLLSYSSTI 808
>gi|339627075|ref|YP_004718718.1| protein CbbX [Sulfobacillus acidophilus TPY]
gi|379008542|ref|YP_005257993.1| CbbX protein [Sulfobacillus acidophilus DSM 10332]
gi|119964673|gb|ABM17102.1| protein CbbX [Sulfobacillus acidophilus DSM 10332]
gi|339284864|gb|AEJ38975.1| protein CbbX [Sulfobacillus acidophilus TPY]
gi|361054804|gb|AEW06321.1| CbbX protein [Sulfobacillus acidophilus DSM 10332]
Length = 304
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
++ LE ++VGL +K ++R+ A +L+D R+ + L PP HM+F GNPGTG
Sbjct: 27 LEVLERLDQDLVGLIPVKTRIREIAALLLVDRMRRTMELNSS---PPSLHMSFTGNPGTG 83
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 84 KTTVAMRMAEVLHRLGYVRKGHLVAVTRDDLVGQYIGHTAPKTK 127
>gi|114763379|ref|ZP_01442786.1| CbbX protein [Pelagibaca bermudensis HTCC2601]
gi|114543917|gb|EAU46928.1| CbbX protein [Roseovarius sp. HTCC2601]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 188 LEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--H 245
L A E D L ++GL +K ++++ A +L+D+ R+ +GL A P H
Sbjct: 15 LAASYEESGVKDILRELDETLIGLAPVKQRIKETAALLLVDKARREMGL---ATETPTLH 71
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M+F GNPGTGKT VA + LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 72 MSFTGNPGTGKTTVALKIADLLHRLGYVRKGHLVTVTRDDLVGQYIGHTAPKTK 125
>gi|403717974|ref|ZP_10943023.1| putative ATPase [Kineosphaera limosa NBRC 100340]
gi|403208774|dbj|GAB97706.1| putative ATPase [Kineosphaera limosa NBRC 100340]
Length = 609
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+DEL EL ++GL +K ++ K + +D RR+ GLK A H+ F+GNPGTGK
Sbjct: 296 SVDELLAELDELIGLSRVKREVHKQVALLKMDLRRQEAGLKT-ATITRHLVFVGNPGTGK 354
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VAR++G + + +G+L ++ EV R++LV ++G T KT + V
Sbjct: 355 TTVARLVGGIYHALGLLDKGQLIEVDRSELVAGYLGQTAEKTVKVV 400
>gi|331699966|ref|YP_004336205.1| CbbX protein [Pseudonocardia dioxanivorans CB1190]
gi|326954655|gb|AEA28352.1| CbbX protein [Pseudonocardia dioxanivorans CB1190]
Length = 342
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-H 245
AL A S + +L+ EL VGL +K ++ + A +L+D R G+ A +P H
Sbjct: 47 ALRAESGIDEVLGKLDREL---VGLAPVKTRIAEIAALLLVDRTRARFGIT--APQPTLH 101
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M+F GNPGTGKT VA + LL+ +G L + V R DLVGE+VGHT PKT+
Sbjct: 102 MSFTGNPGTGKTTVAMRMADLLHRLGYLRRGHLVAVTRDDLVGEYVGHTAPKTK 155
>gi|118484962|gb|ABK94346.1| unknown [Populus trichocarpa]
Length = 250
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 23/231 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A +H ++SGD+ A + ++ NP +N R+ ++TPLH++A +AE V L +
Sbjct: 14 AELHAASRSGDMKAMETIVSSNPLAINSRDK-HSRTPLHLAAWSGQAEAVTYLCKH---- 68
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
K ++ A M +H A++ G E + LL+ GA I+A G+TPLH Y ++
Sbjct: 69 KADVGAAAMDDMGAIHFASQKGHLEVVRTLLSSGASIKASTRKGLTPLH----YGVQGSH 124
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEA---- 190
VK L++ A + + G TPLD +N ++R L L SE+ K+ L
Sbjct: 125 LELVKYLVKKGASLTVRTKAGMTPLDLATN----EEIR-LFLEESEKTSKKETLNGKDKA 179
Query: 191 -CSETKAKMDELENELSN---IVGLHELKIQLRKWAKGMLLDERRKALGLK 237
SE K +++ ++E S G HE ++ KG D + + LK
Sbjct: 180 EVSEPKTSLED-KSEYSGGEATAGEHEEQVNESVKRKGEADDTKETSTELK 229
>gi|146338728|ref|YP_001203776.1| CbbX-like protein [Bradyrhizobium sp. ORS 278]
gi|146191534|emb|CAL75539.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. ORS 278]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ + +++L+ EL VGL +K ++R+ A +L++ R+ +GL A P
Sbjct: 20 RREFESV-DIAPVLEQLDREL---VGLVPVKTRIREIASLLLMERIRQKMGL---ATTFP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 129
>gi|400533131|ref|ZP_10796670.1| hypothetical protein MCOL_V202030 [Mycobacterium colombiense CECT
3035]
gi|400333475|gb|EJO90969.1| hypothetical protein MCOL_V202030 [Mycobacterium colombiense CECT
3035]
Length = 617
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLHEAERQLAEFIGLDEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|315320493|ref|YP_004072549.1| CbbX protein [Thalassiosira oceanica CCMP1005]
gi|283568966|gb|ADB27503.1| CbbX protein [Thalassiosira oceanica CCMP1005]
gi|397582593|gb|EJK52349.1| hypothetical protein THAOC_28396 [Thalassiosira oceanica]
gi|397593039|gb|EJK55849.1| hypothetical protein THAOC_24360 [Thalassiosira oceanica]
Length = 287
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGRL 266
+VGL +K ++R+ A +L+D+ RK LG + A P HM+F G+PGTGKT V + +
Sbjct: 26 LVGLAPVKARIREIAALLLIDKLRKNLG--ITANSPGLHMSFTGSPGTGKTTVGLKMADI 83
Query: 267 LYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 84 LFQLGYVKKGHLLTVTRDDLVGQYIGHTAPKTK 116
>gi|269125836|ref|YP_003299206.1| AAA ATPase central domain-containing protein [Thermomonospora
curvata DSM 43183]
gi|268310794|gb|ACY97168.1| AAA ATPase central domain protein [Thermomonospora curvata DSM
43183]
Length = 819
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+ E L ++GL +K Q+R+ A + + + R GL RPP H F+G PGTG
Sbjct: 539 LQEALASLDAMIGLEPVKRQVREIAAQLQVAQMRAERGLPT---RPPMRHFVFVGPPGTG 595
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
KT VAR+LGR+ +G+L V E R DLVGE +G T KT R + L + +
Sbjct: 596 KTTVARVLGRVFAALGLLARPTVVEAHRVDLVGEHLGATAIKTNRVIDSALGGVLFI 652
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP-PHMAFLGNPGTGKTMVARI 262
EL ++GL +K Q+R A + R A G V +P H F+G PGTGKT VAR+
Sbjct: 253 ELEAMIGLEPVKRQVRSIAAAIEAAHLRAAAG--VPTEKPLRHFVFVGPPGTGKTTVARV 310
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
L + Y G+LP V E QR DLVGE +G T KT R + L + +
Sbjct: 311 LAGIFYAFGLLPRPTVVEAQRADLVGEHLGATAIKTNRLIDSALGGVLFI 360
>gi|254777312|ref|ZP_05218828.1| ATPase, AAA family protein [Mycobacterium avium subsp. avium ATCC
25291]
Length = 617
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLAEAERQLAEFIGLDEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|145693249|gb|ABP93410.1| cbbx protein [Saccharina japonica]
gi|295922219|gb|ADG62366.1| CbbX [Saccharina japonica]
Length = 424
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 62/104 (59%), Gaps = 1/104 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D L+ S++VGL +K+++R+ A ++LD+ R LG A HM F G PGTGKT
Sbjct: 134 DILDKLDSDLVGLVPVKLRVRQIAALLVLDKMRGKLGFDT-AVPSLHMCFTGAPGTGKTT 192
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA +G++L +G V R DLVG++VGHT PKT+ +
Sbjct: 193 VALRMGQILQRMGYCRQGHVVVATRDDLVGQYVGHTAPKTKEMI 236
>gi|448927115|gb|AGE50690.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus CVA-1]
gi|448928797|gb|AGE52367.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus CVR-1]
Length = 292
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LLE +
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLLEHGAH--- 56
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 57 -IDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D + L+E+ AD +AKD++G TPL
Sbjct: 111 --ASDGDVARMLIEHGADINAKDSDGCTPL 138
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 18/141 (12%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A GD+ R+L E+ + +N ++ TPL+ + NK + LL G+D + A
Sbjct: 111 ASDGDV---ARMLIEHGADINAKDS-DGCTPLYWAG--NKC--IARLLTAHGSD---VSA 159
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ +G TPLH A + G + A++LL H + A+ +G TPLH++ S R Y V+
Sbjct: 160 KDRHGYTPLHHA-RTG--DIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRV 212
Query: 141 LLEYNADCSAKDNEGKTPLDH 161
LLE+ AD AKDN+ +TP +H
Sbjct: 213 LLEHGADIRAKDNDSRTPFEH 233
>gi|399949600|gb|AFP65258.1| CbbX protein [Chroomonas mesostigmatica CCMP1168]
Length = 400
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNP 252
K +++L+N+L VGL +K ++R+ A +++D+ R+ LGL G P HM F G P
Sbjct: 114 VKEILEKLDNDL---VGLIPVKSRVREIAALLVVDKLRRNLGLDTGV--PSLHMCFTGAP 168
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VA +G++L +G + + R DLVG++VGHT PKT+
Sbjct: 169 GTGKTTVAMRMGQILQRMGYSRSGHLVVATRDDLVGQYVGHTAPKTK 215
>gi|325295171|ref|YP_004281685.1| ankyrin [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065619|gb|ADY73626.1| Ankyrin [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 235
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 8/127 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL + +N ++VK +E N + A++ +G TPLH+A + AKLL+ HGA
Sbjct: 72 TPLFYAIDFNNIKLVKLFIEKGAN----INAKDYFGVTPLHLATMRNNFKIAKLLINHGA 127
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK N G TPLH + Y+ Y+ K L++ A+ + +D G TPL + + ++
Sbjct: 128 NINAKDNYGYTPLHFAAIYN----SYSVAKLLIKEGANVNERDFYGNTPLHYCARTRKAS 183
Query: 170 KLRELLL 176
+ +LLL
Sbjct: 184 LVAKLLL 190
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKN-GCNEAAKLLLAHG 108
TPLH +A YN + K L++ N + ++ YG TPLH A+ + AKLLL G
Sbjct: 138 TPLHFAAIYNSYSVAKLLIKEGAN----VNERDFYGNTPLHYCARTRKASLVAKLLLKSG 193
Query: 109 AFIEAKANNGMTPLHLS 125
A ++ K + G TPL ++
Sbjct: 194 ADVKIKNDKGKTPLDVA 210
>gi|385676163|ref|ZP_10050091.1| AAA ATPase central domain-containing protein [Amycolatopsis sp.
ATCC 39116]
Length = 547
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D L +L +VGL +K ++R + ++ R GL GA H+ F G PGTGKT
Sbjct: 277 LDALLADLDGMVGLPAVKAEVRSLVDEIQVNAWRSRAGLSTGALSH-HLIFAGAPGTGKT 335
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
VAR GRLL +G+L EV R DLVG++VGHT KT
Sbjct: 336 TVARTYGRLLRELGVLGGGEFREVSRRDLVGQYVGHTAEKT 376
>gi|189502738|ref|YP_001958455.1| hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498179|gb|ACE06726.1| hypothetical protein Aasi_1435 [Candidatus Amoebophilus asiaticus
5a2]
Length = 1585
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + YN +IVK LL+ ++ A+N YG TPLH A +NG E K L+ GA
Sbjct: 1463 TALHFATRYNHLKIVKLLLD----KGADIHAKNKYGNTPLHKACENGHLEVIKYLVEKGA 1518
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
I AK NG TPLH + + VK LL+ AD AK+ G TP+D
Sbjct: 1519 DINAKNKNGNTPLH----KACENGHLEVVKYLLDKGADIQAKNKNGNTPID 1565
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 50/119 (42%), Positives = 61/119 (51%), Gaps = 14/119 (11%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + YN EIVK LLE ++ A+N YG T LH A +NG E K LL GA
Sbjct: 1001 TALHFATRYNHLEIVKLLLE----KGADINAKNKYGNTTLHKACENGHLEVVKYLLDKGA 1056
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL------DHL 162
I K N+ T LH ++ R VK LL+ AD +AK+ EG T L DHL
Sbjct: 1057 DINVKNNDQWTALH----FATRYNHLKIVKLLLDKGADINAKNKEGNTTLHKACENDHL 1111
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 1 MQKNQDRRSRSAKPAT--IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGY 58
++K D +++ + T I+ C + GDL + LL + + + N T LH Y
Sbjct: 1217 LEKGADIHAKNKESETLLIYAC-KKGDLELVKYLLDKGADINVKNND--QWTALHFVTRY 1273
Query: 59 NKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNG 118
N EIVK LL+ ++ A+N YG T LH A +N E KLLL GA I K N+
Sbjct: 1274 NHLEIVKYLLD----KGADINAKNKYGNTTLHKACENDHLEIVKLLLDKGADINVKNNDQ 1329
Query: 119 MTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE 154
T LH ++ R VK LL+ AD + K+N+
Sbjct: 1330 WTALH----FATRYNHLEIVKYLLDKGADINVKNND 1361
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 16 TIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
T+H ++G L + LL + + + N T LH + YN +IVK LL+
Sbjct: 1035 TLHKACENGHLEVVKYLLDKGADINVKNND--QWTALHFATRYNHLKIVKLLLD----KG 1088
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
++ A+N G T LH A +N E KLLL GA I K N+ T LH ++ R
Sbjct: 1089 ADINAKNKEGNTTLHKACENDHLEIVKLLLDKGADINVKNNDQWTALH----FATRYNHL 1144
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL------DHL 162
VK LL+ AD + K+N+ T L DHL
Sbjct: 1145 EIVKYLLDKGADINVKNNDQWTALHFATRYDHL 1177
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + E+VK L+E +++A+N GETP H A N E K LL GA
Sbjct: 605 TPLHYACRDGNLEVVKYLVE----KGADIQAKNKDGETPFHWAHDNDHLEVVKYLLEKGA 660
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I+AK+ + L +++ R D +K L+E D A + +G+T L
Sbjct: 661 NIQAKSRESESLL----YWACREGDLEVIKYLVEKGVDIQATNEDGETLL 706
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+T LH + E+VK L+E V++ + YG TPLH A ++G E K L+
Sbjct: 570 GETLLHCVCKNDNIELVKYLVE----KGVDINVIDGYGVTPLHYACRDGNLEVVKYLVEK 625
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
GA I+AK +G TP H ++ ++ VK LLE A+ AK E ++ L
Sbjct: 626 GADIQAKNKDGETPFH----WAHDNDHLEVVKYLLEKGANIQAKSRESESLL 673
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + Y+ EIVK LL+ ++ +N T LH A + + KLLL GA
Sbjct: 1430 TALHFATRYDHLEIVKYLLD----KGADINVKNKNQWTALHFATRYNHLKIVKLLLDKGA 1485
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I AK G TPLH + + +K L+E AD +AK+ G TPL
Sbjct: 1486 DIHAKNKYGNTPLH----KACENGHLEVIKYLVEKGADINAKNKNGNTPL 1531
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 27 LAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGE 86
L +LL + + ++ +N TPLH + E++K L+E ++ A+N G
Sbjct: 1474 LKIVKLLLDKGADIHAKNK-YGNTPLHKACENGHLEVIKYLVE----KGADINAKNKNGN 1528
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH A +NG E K LL GA I+AK NG TP+ ++ + + Y + LL
Sbjct: 1529 TPLHKACENGHLEVVKYLLDKGADIQAKNKNGNTPIDIA-----KQKKYGALVNLLTEKL 1583
Query: 147 D 147
D
Sbjct: 1584 D 1584
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
+ K D +++ + T A D L +LL + + +N +N T LH + YN
Sbjct: 1085 LDKGADINAKNKEGNTTLHKACENDHLEIVKLLLDKGADINVKNNDQ-WTALHFATRYNH 1143
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
EIVK LL+ ++ +N T LH A + + K LL GA I K N+ T
Sbjct: 1144 LEIVKYLLD----KGADINVKNNDQWTALHFATRYDHLKIVKYLLDKGADINVKDNDQWT 1199
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
LH ++ R + VK LLE AD AK+ E +T L
Sbjct: 1200 ALH----FATRYDHLKIVKLLLEKGADIHAKNKESETLL 1234
Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + E+VK L+E ++ A + GET LH A G E KLL+ GA
Sbjct: 803 TSLHYACREGNLEVVKYLVE----KGADINATDEDGETLLHYACNKGNLEVVKLLVDKGA 858
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I K+N+ T LH ++ R + VK LL+ AD AK+ E +T L
Sbjct: 859 DINIKSNDQCTALH----FATRYDHLEIVKYLLDKGADIQAKNKEVETLL 904
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + YN EIVK LL+ ++ +N T LH A + E KLLL GA
Sbjct: 968 TALHFATRYNHLEIVKYLLD----KGADINVKNNDQWTALHFATRYNHLEIVKLLLEKGA 1023
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK G T LH + + VK LL+ AD + K+N+ T L H +
Sbjct: 1024 DINAKNKYGNTTLH----KACENGHLEVVKYLLDKGADINVKNNDQWTAL-HFATRYNHL 1078
Query: 170 KLRELLL 176
K+ +LLL
Sbjct: 1079 KIVKLLL 1085
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 9/202 (4%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
++K D AT+ C D + + L E + +N + TPLH + +
Sbjct: 722 VEKGADINITDGDGATLLHCICKNDNIELVKYLVEKGADINITDG-DGWTPLHYACENGE 780
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
EIVK L+E ++ + YG T LH A + G E K L+ GA I A +G T
Sbjct: 781 LEIVKYLVE----KGADINVIDGYGVTSLHYACREGNLEVVKYLVEKGADINATDEDGET 836
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
LH Y+ + VK L++ AD + K N+ T L + ++ LL ++
Sbjct: 837 LLH----YACNKGNLEVVKLLVDKGADINIKSNDQCTALHFATRYDHLEIVKYLLDKGAD 892
Query: 181 EQRKRRALEACSETKAKMDELE 202
Q K + +E K +LE
Sbjct: 893 IQAKNKEVETLLIYACKKGDLE 914
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + E VK L+E V++ A+N +G TPL A G E K L+ GA
Sbjct: 507 PLHKACRIGNLEAVKYLIE----KGVDIHAKNKHGNTPLCYACDKGHLEVVKYLVEKGAD 562
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
I A +G T LH ++++ VK L+E D + D G TPL +
Sbjct: 563 INATDEDGETLLHCVC----KNDNIELVKYLVEKGVDINVIDGYGVTPLHY 609
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
++K D ++++ T A D L + L E + + ++ +++ L+ +
Sbjct: 623 VEKGADIQAKNKDGETPFHWAHDNDHLEVVKYLLEKGANIQAKSR-ESESLLYWACREGD 681
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
E++K L+E V+++A N GET LH A N E K L+ GA I +G T
Sbjct: 682 LEVIKYLVE----KGVDIQATNEDGETLLHCAYSNNHLELVKYLVEKGADINITDGDGAT 737
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
LH ++++ VK L+E AD + D +G TPL +
Sbjct: 738 LLHCIC----KNDNIELVKYLVEKGADINITDGDGWTPLHY 774
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH + YN EIVK LL+ ++ +N LH A + + KLLL GA I
Sbjct: 1366 LHFATRYNHLEIVKYLLD----KGADINVKNNDQWIALHFATRYNHLKIVKLLLDKGADI 1421
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
K N+ T LH ++ R + VK LL+ AD + K+ T L H + K+
Sbjct: 1422 NVKNNDQWTALH----FATRYDHLEIVKYLLDKGADINVKNKNQWTAL-HFATRYNHLKI 1476
Query: 172 RELLL 176
+LLL
Sbjct: 1477 VKLLL 1481
Score = 45.4 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
E+VK+L++ G+D + ++ +N + T LH A + G E K LL GA I K N+ T
Sbjct: 914 EVVKNLVD-KGSD-INVKNKNQW--TALHFATRYGHLEIVKYLLDKGADINVKNNDQWTA 969
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LH ++ R VK LL+ AD + K+N+ T L H + ++ +LLL
Sbjct: 970 LH----FATRYNHLEIVKYLLDKGADINVKNNDQWTAL-HFATRYNHLEIVKLLL 1019
>gi|118466988|ref|YP_883993.1| ATPase AAA [Mycobacterium avium 104]
gi|118168275|gb|ABK69172.1| ATPase, AAA family protein [Mycobacterium avium 104]
Length = 617
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 311 AAHERKAVLLAEAERQLAEFIGLDEVKNQVSRLKSSVAMELVRKQRGLAV-AQRAHHLVF 369
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 370 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 429
Query: 309 ITCL 312
+ L
Sbjct: 430 VLFL 433
>gi|365889268|ref|ZP_09427974.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. STM 3809]
gi|365335027|emb|CCE00505.1| putative CbbX-like protein, containing AAA-ATPase domain
[Bradyrhizobium sp. STM 3809]
Length = 313
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
RR E+ + +++L+ EL VGL +K ++R+ A +L++ R+ +GL A P
Sbjct: 20 RREFESV-DIAPVLEQLDREL---VGLVPVKTRIREIASLLLMERIRQKMGL---ATTFP 72
Query: 245 --HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + V V R DLVG+++GHT PKT+
Sbjct: 73 TLHMSFTGNPGTGKTTVALRMAGILHRLGFVRRGHVISVTRDDLVGQYIGHTAPKTK 129
>gi|71842300|ref|YP_277388.1| CbbX [Emiliania huxleyi]
gi|60101543|gb|AAX13887.1| putative rubisco expression protein [Emiliania huxleyi]
gi|336286212|gb|AEI29548.1| CbbX [Emiliania huxleyi]
Length = 290
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ + +D+L+ +L VGL +K ++++ A +L+ RK LGL + + HM+F G
Sbjct: 12 TDIQGVIDQLDEDL---VGLAPVKARIKEIAALLLVQRLRKNLGLGLNSTSVGLHMSFTG 68
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+PGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 69 SPGTGKTAVATRMADILFKLGYIKKGHLITVTRDDLVGQYIGHTAPKTK 117
>gi|288556839|ref|YP_003428774.1| stage V sporulation protein K [Bacillus pseudofirmus OF4]
gi|288547999|gb|ADC51882.1| stage V sporulation protein K [Bacillus pseudofirmus OF4]
Length = 783
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A S+ ++ LE EL +++GLH++K ++ K + + + RK G + HM
Sbjct: 230 AASKGDTELSALE-ELDSMIGLHDVKKRIAKLYQFLHYQKARKEQGFRFKDELSLHMILT 288
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GNPGTGKT +AR++ ++ Y +G+L V EV R+ LVG +VG T +T + +
Sbjct: 289 GNPGTGKTRLARLIAKIYYELGLLERPEVYEVDRSQLVGGYVGQTEEQTTQAI 341
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 6/116 (5%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HM 246
E S+T + D LE +L+ ++GL E K + + + + + R+ L+V +P H
Sbjct: 507 EVSSKTNEENDPLE-QLNELIGLTEAKKTIERLTSFVKVQQLRREHHLEV---KPIGLHA 562
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
F GNPGTGKT VARI + L+ +G+L + EV R DLV +VG T KTR ++
Sbjct: 563 VFTGNPGTGKTTVARIYAKALHQLGLLKRGHMVEVSRADLVAGYVGQTAIKTREKI 618
>gi|49259167|pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
gi|37576201|gb|AAQ93810.1| ankyrin repeat protein off7 [synthetic construct]
Length = 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 84/146 (57%), Gaps = 12/146 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A EIV+ LL+ +++A +++G TPLH
Sbjct: 31 RILMANGADVNAADNT-GTTPLHLAAYSGHLEIVEVLLKH----GADVDASDVFGYTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV-WYSIRSEDYATVKTLLEYNADCS 149
+AA G E ++LL +GA + A ++GMTPLHL+ W + V+ LL++ AD +
Sbjct: 86 LAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLE-----IVEVLLKHGADVN 140
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELL 175
A+D GKT D +S G+ L E+L
Sbjct: 141 AQDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A N G TPLHL+ + S V+ LL++ AD A
Sbjct: 21 AARAGQDDEVRILMANGADVNAADNTGTTPLHLAAY----SGHLEIVEVLLKHGADVDAS 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G TPL HL+ G ++ E+LL
Sbjct: 77 DVFGYTPL-HLAAYWGHLEIVEVLL 100
>gi|254390270|ref|ZP_05005488.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197703975|gb|EDY49787.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 603
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D + EL +VGL +K ++ + RR+A GL V R H+ F G+PGTGKT
Sbjct: 332 DSMLAELDGMVGLRAVKREVTDLVSLLTTARRREAAGLPV-PRISRHLVFSGSPGTGKTT 390
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ RLL +G+L ++ EV R DLVG +VGHT T+
Sbjct: 391 VARLYARLLASLGVLSRGQLVEVARADLVGRYVGHTAQLTK 431
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L ++GL +K Q+R L +RRK LG+ V + H+ F G PGTGKT VAR+ G
Sbjct: 62 LEALIGLENVKHQVRTLVNLNQLAQRRKRLGMPVPSMSR-HLVFAGPPGTGKTTVARLYG 120
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+L +G+LP + EV R DLV + +G T KT
Sbjct: 121 SILAELGVLPQGHLVEVSRADLVAQVIGGTAIKT 154
>gi|357393850|ref|YP_004908691.1| putative ATPase [Kitasatospora setae KM-6054]
gi|311900327|dbj|BAJ32735.1| putative ATPase [Kitasatospora setae KM-6054]
Length = 1124
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
EL EL +VGL K Q+ + RR+ GL AR H+ F G PGTGKT V
Sbjct: 854 ELLAELRAMVGLPAAKEQVEDLVDLLRQTRRREEAGLPT-ARISHHLVFAGPPGTGKTTV 912
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR+ GRLL +G+LP ++ E R DLVG ++GHT TR
Sbjct: 913 ARLYGRLLAELGVLPGGQLVETARADLVGRYIGHTAQLTR 952
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L ++VGL +K Q+ L RR+ G+ H+ F G PGTGKT VAR+ G
Sbjct: 582 LESLVGLAGVKEQVATLVNLNKLARRRELAGMPA-LPMSRHLVFAGPPGTGKTTVARLYG 640
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+L +G+L + EV R DLV +G T KT
Sbjct: 641 SILAELGVLREGHLVEVTRADLVASVIGGTALKT 674
>gi|123461048|ref|XP_001316774.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121899490|gb|EAY04551.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 179
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A G+ A R L EN + +N + + ++P+H++ NK I+ +LL+ G D + +
Sbjct: 29 AAKGNSKALIRHLVENGADINSHDDI-GRSPIHIAVENNKKSII-ALLKSLGAD---INS 83
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ YGETPLH A E L++ GA IEAK NNG +H++ + V+
Sbjct: 84 RDNYGETPLHYALHQCRKEIVDFLISQGADIEAKDNNGRKIIHIAA----ENGRVGIVEK 139
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
L+ AD ++ DN+G+TPLD N S K+ +L+ H
Sbjct: 140 LISLGADLNSADNQGQTPLDIALN--YSRKIATILMQHD 176
>gi|123477467|ref|XP_001321901.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121904736|gb|EAY09678.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 683
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 78/127 (61%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN+ E + L+ ++ +++A++ G PLH+AA N E A++L+++GA
Sbjct: 396 TPLHLAARYNRKETAEILI----SNGADVDAEDKDGCIPLHLAASNNWKETAEILISNGA 451
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+ +G TPLHL+ + + T + L+ AD +AKD +G TPL HL+ S
Sbjct: 452 DVDAEDKDGCTPLHLAASENSKE----TAEILISNGADVNAKDKDGCTPL-HLAARENSK 506
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 507 ETAEILI 513
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN+ E + L+ ++ +++A++ G TPLH+AA N E A++L+++GA
Sbjct: 528 TPLHLAARYNRKETAEILI----SNGADVDAKDKDGCTPLHLAASNNWKETAEILISNGA 583
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ AK G TPLHL+ Y+ R E T + L+ AD +A+D G TPL H + S
Sbjct: 584 DVNAKDKGGCTPLHLAARYN-RKE---TAEILISNGADINAEDKYGCTPL-HYAAIKNSK 638
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 639 ETAEILI 645
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E + L+ ++ ++ A++ G TPLH+AA+ E A++L+++GA
Sbjct: 462 TPLHLAASENSKETAEILI----SNGADVNAKDKDGCTPLHLAARENSKETAEILISNGA 517
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+ +G TPLHL+ Y+ R E T + L+ AD AKD +G TPL HL+
Sbjct: 518 DVDAEDKDGCTPLHLAARYN-RKE---TAEILISNGADVDAKDKDGCTPL-HLAASNNWK 572
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 573 ETAEILI 579
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN+ E + L+ ++ +++A++ G PLH+AA N E A++L+++GA
Sbjct: 198 TPLHLAARYNRKETAEILI----SNGADVDAEDKDGCIPLHLAASNNWKETAEILISNGA 253
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ AK G TPLHL+ R T + L+ AD +A+D + TPL HL+
Sbjct: 254 DVNAKDKGGCTPLHLAA----RENSKETAEILISNGADVNAEDKDVFTPL-HLAARYNRK 308
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 309 ETAEILI 315
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++A N E + L+ ++ +++A++ G TPLH+AA E A++L+++GA
Sbjct: 430 PLHLAASNNWKETAEILI----SNGADVDAEDKDGCTPLHLAASENSKETAEILISNGAD 485
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
+ AK +G TPLHL+ R T + L+ AD A+D +G TPL HL+ +
Sbjct: 486 VNAKDKDGCTPLHLAA----RENSKETAEILISNGADVDAEDKDGCTPL-HLAARYNRKE 540
Query: 171 LRELLL 176
E+L+
Sbjct: 541 TAEILI 546
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN+ E + L+ ++ +++A++ G PLH+AA N E A++L+++GA
Sbjct: 99 TPLHLAARYNRKETAEILI----SNGADVDAEDKDGCIPLHLAASNNWKETAEILISNGA 154
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+ + TPLHL+ R T + L+ AD +A+D + TPL HL+
Sbjct: 155 DVDAEDKDVFTPLHLAA----RDNSKETAEILISNGADVNAEDKDVFTPL-HLAARYNRK 209
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 210 ETAEILI 216
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN+ E + L+ ++ +++A++ G PLH+AA N E A++L+++GA
Sbjct: 297 TPLHLAARYNRKETAEILI----SNGADVDAEDKDGCIPLHLAASNNWKETAEILISNGA 352
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+ +G TPLHL+ + + T + L+ AD +AK + TPL HL+
Sbjct: 353 DVDAEDKDGCTPLHLAASENSKE----TAEILISNGADVNAKGKDVFTPL-HLAARYNRK 407
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 408 ETAEILI 414
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++A N E + L+ ++ +++A++ G TPLH+AA E A++L+++GA
Sbjct: 331 PLHLAASNNWKETAEILI----SNGADVDAEDKDGCTPLHLAASENSKETAEILISNGAD 386
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
+ AK + TPLHL+ Y+ R E T + L+ AD A+D +G PL HL+ +
Sbjct: 387 VNAKGKDVFTPLHLAARYN-RKE---TAEILISNGADVDAEDKDGCIPL-HLAASNNWKE 441
Query: 171 LRELLL 176
E+L+
Sbjct: 442 TAEILI 447
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN+ E + L+ ++ ++ A++ YG TPLH AA E A++L+++GA
Sbjct: 594 TPLHLAARYNRKETAEILI----SNGADINAEDKYGCTPLHYAAIKNSKETAEILISNGA 649
Query: 110 FIEAKANNGMTPLHLSVWYS 129
++A+ +G TPLH + Y+
Sbjct: 650 DVDAEDKDGCTPLHYASRYN 669
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
++ A++ G TPLH+AA+ E A++L+++GA + AK + TPLHL+ Y+ R E
Sbjct: 55 ADVNAKDKGGCTPLHLAARENSKETAEILISNGADVNAKGKDVFTPLHLAARYN-RKE-- 111
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
T + L+ AD A+D +G PL HL+ + E+L+
Sbjct: 112 -TAEILISNGADVDAEDKDGCIPL-HLAASNNWKETAEILI 150
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 99 EAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
E A++L+++GA + AK G TPLHL+ R T + L+ AD +AK + TP
Sbjct: 45 ETAEILISNGADVNAKDKGGCTPLHLAA----RENSKETAEILISNGADVNAKGKDVFTP 100
Query: 159 LDHLSNGPGSAKLRELLL 176
L HL+ + E+L+
Sbjct: 101 L-HLAARYNRKETAEILI 117
>gi|329941782|ref|ZP_08291047.1| putative sporulation protein K [Streptomyces griseoaurantiacus
M045]
gi|329299499|gb|EGG43399.1| putative sporulation protein K [Streptomyces griseoaurantiacus
M045]
Length = 814
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 551 GELDALVGLESVKREVRALTDMIEVGRRRREAGLKAASVRR-HLVFTGSPGTGKTTVARL 609
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L+ +G+L + EV R DLVGE +G T +T+
Sbjct: 610 YGEILHSLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 646
>gi|322705901|gb|EFY97484.1| nonsense-mediated mRNA decay protein, putative [Metarhizium
anisopliae ARSEF 23]
Length = 2207
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%)
Query: 232 KALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFV 291
K+LG+ + P + F G PGTGKTM AR G+L Y +G L V E TDL+G++V
Sbjct: 1792 KSLGMDINEEIPFNFLFRGPPGTGKTMTARKFGKLYYDMGFLSKAEVVECSATDLIGQYV 1851
Query: 292 GHTGPKTRRRVGHLLSEI 309
GHTGPK ++ + + L ++
Sbjct: 1852 GHTGPKVQKVLNNALGKV 1869
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 13/101 (12%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF------LGNPGTGKTM 258
L+ ++GL E+K ++R + + +R+ P MAF +G+PGTGKT
Sbjct: 1491 LNEMIGLAEVKQEVRVLLDSLTTNYQREL-------EEEPLMAFSLNRVFIGSPGTGKTT 1543
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA++ G++L +G+L V D +G +G + +T+
Sbjct: 1544 VAKLYGKILASLGMLSNGEVVVKTPADFIGSVLGQSEAQTK 1584
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+E N+L +++GL +K + K + + R+ L L + + LGNPGTGKT
Sbjct: 1210 NEALNKLMDLIGLETVKEEFLA-VKSNIDTKIRQELSL---SEERLSCSLLGNPGTGKTT 1265
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDL 286
VAR+ L G LP D E + L
Sbjct: 1266 VARLWAEFLACTGALPGDGFKETSGSKL 1293
>gi|359424105|ref|ZP_09215229.1| hypothetical protein GOAMR_22_00100 [Gordonia amarae NBRC 15530]
gi|358240579|dbj|GAB04811.1| hypothetical protein GOAMR_22_00100 [Gordonia amarae NBRC 15530]
Length = 591
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 187 ALEACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
A+E S T ++ D+ + L +GL E+K+Q+ K + R GL A R H
Sbjct: 289 AMENGSGTDTELVDDAQRRLDAQIGLDEVKLQVAKLRSAATMARLRSDKGLST-ASRSLH 347
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHL 305
+AF G PGTGKT VARI+ + +G + +D+V EV R DLVG+ +G T KT +
Sbjct: 348 LAFTGPPGTGKTTVARIVATMYRGLGFIKSDKVVEVSRGDLVGQHLGSTAIKTSEVIDSA 407
Query: 306 LSEI 309
L +
Sbjct: 408 LDGV 411
>gi|384569040|gb|AFI09265.1| LmrCD-specific DARPin, partial [synthetic construct]
Length = 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 12/146 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N ++ + TPLH++A EIV+ LL+ + ++ A +++G TPLH
Sbjct: 31 RILMANGADVNAKD-IFGDTPLHLAAWIGHLEIVEVLLK----NGADVNAADIWGNTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS-VWYSIRSEDYATVKTLLEYNADCS 149
+AA G E ++LL HGA + A G TPLHL+ +W + V+ LL+ D +
Sbjct: 86 LAADAGHLEIVEVLLKHGADVNAIDWMGDTPLHLTALWGHLE-----IVEVLLKNGVDVN 140
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELL 175
A+D GKT D +S G+ L E+L
Sbjct: 141 AQDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + AK G TPLHL+ W V+ LL+ AD +A
Sbjct: 21 AARVGRDDEVRILMANGADVNAKDIFGDTPLHLAAWIG----HLEIVEVLLKNGADVNAA 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL H +
Sbjct: 77 DIWGNTPL-HLAADAGHLEIVEVLLKHGAD 105
>gi|333361284|pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
gi|333361285|pdb|3NOC|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N R+ TPLH++A + EIV+ LL+ + ++ A++ G TPLH
Sbjct: 31 RILMANGADVNARD-FTGWTPLHLAAHFGHLEIVEVLLK----NGADVNAKDSLGVTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+ G E ++LL +GA + A ++G TPLHL+ + V+ LL+ AD +A
Sbjct: 86 LAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAA----KRGHLEIVEVLLKNGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A+ G TPLHL+ + V+ LL+ AD +AK
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFG----HLEIVEVLLKNGADVNAK 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D+ G TPL HL+ G ++ E+LL
Sbjct: 77 DSLGVTPL-HLAARRGHLEIVEVLL 100
>gi|294673359|ref|YP_003573975.1| AAA family ATPase [Prevotella ruminicola 23]
gi|294473223|gb|ADE82612.1| ATPase, AAA family [Prevotella ruminicola 23]
Length = 1063
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
ET +D + NEL +G+ +K +R+ A + ++R A+G + + GNP
Sbjct: 793 ETARPLDVVLNELEEFIGMRSVKDSIRRLAVQSMFMKQRAAMGAGSVQQMSMNFVLTGNP 852
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
GTGKT +AR +G +L + ILPT RV E R LVG+++G T PK
Sbjct: 853 GTGKTSIARKMGEILQAMDILPTSRVIEASRATLVGKYMGET-PK 896
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++++ +L + +G+ E+K +++ A + +R GL + H+ GNPGTGKT
Sbjct: 244 VEDILRDLDSYIGMDEVKAAVKEMAYSVQNAMQRAERGLGEQEKMSMHIILTGNPGTGKT 303
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
+AR LG +L +G L + V EV R +V ++ G T PK
Sbjct: 304 TIARKLGEILAAIGYLDSGHVVEVDRAKMVSQYQGET-PK 342
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D+ +L +VGL +K ++ A + L R G H F GNPGTGKT
Sbjct: 524 VDDCLKKLDGLVGLSGVKKEIANLAAFLNLQIARGETNTFQGK----HYVFTGNPGTGKT 579
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+ + +G++ ++ E R+ LV F G T KT + V
Sbjct: 580 TVARIMADIFKTLGVVARGQLVEADRSKLVAGFSGQTAIKTNQLV 624
>gi|270002551|gb|EEZ98998.1| hypothetical protein TcasGA2_TC004859 [Tribolium castaneum]
Length = 1203
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+SGDL QRLL P+ +N R+ TPLH ++GYN+ +V+ LLE ++
Sbjct: 496 AKSGDLEQVQRLLETYPNTVNCRDLDGRHSTPLHFASGYNRVAVVEYLLE----QGADVH 551
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + S + + Y VK
Sbjct: 552 AKDKGGLVPLHNACSYGHYEVTELLVKHGANVNVADLWKFTPLHEA---SAKGK-YEIVK 607
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL++ AD + K+ +G T LD + G
Sbjct: 608 LLLKHGADPTKKNRDGATALDLVREG 633
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 15 ATIHGCAQSGDLLAFQRLLRE---NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWP 71
A + A+ G+L QRL+ N + RN TPLH++AGYN E+ + LLE
Sbjct: 645 AALLDAAKKGNLARIQRLITAENINCRDVQGRN----STPLHLAAGYNNVEVAEYLLEH- 699
Query: 72 GNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIR 131
++ AQ+ G PLH A+ G + A LL+ + + A G TPLH + R
Sbjct: 700 ---GADVNAQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-R 755
Query: 132 SEDYATVKTLLEYNADCSAKDNEGKTPLD 160
++ A LL + AD K+ EG+TP+D
Sbjct: 756 TQLCA---LLLAHGADPFLKNQEGQTPMD 781
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 24 GDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQN 82
GD+ ++L+ P +N R+ TPLH +AGY + ++V+ LL ++A++
Sbjct: 32 GDISRVRKLV--TPQTVNARDTAGRKSTPLHFAAGYGRRDVVEFLLSA----GASIQARD 85
Query: 83 MYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL 142
G PLH A G + +LLL GA + N TPLH + +I+ + + LL
Sbjct: 86 DGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKVDVCI-ALL 141
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEA 190
++ A+ ++EGKTPLD N R +L + E RK LEA
Sbjct: 142 QHGAEPDITNSEGKTPLDVADN-----STRAVL---TGEYRKDELLEA 181
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ ++ A++ G PLH A G E ++L+ HGA
Sbjct: 210 TPLHLAAGYNRSRVVQLLLQH----GADVHAKDKGGLVPLHNACSYGHFEVTEMLIKHGA 265
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD---HLSNGP 166
+ A TPLH A K+ LE CS +EG P H +
Sbjct: 266 NVNANDLWAFTPLH-----------EAASKSRLEV---CSLLLSEGADPTQLNCHSKSAI 311
Query: 167 GSAKLRELLLWHSEEQRKRRALEACSE 193
A REL S E R + L+AC +
Sbjct: 312 DVAPTRELQERLSCEYRGHQLLDACKQ 338
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL HGA + A+ G+ PLH + Y D A + L++YN
Sbjct: 679 TPLHLAAGYNNVEVAEYLLEHGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 734
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 735 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 768
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAG--YNKAEIVKSLLEWPGND 74
+ C Q+ D ++ L ++N ++P T LHV+ Y K + + LL G
Sbjct: 333 LDACKQA-DTTKLKKFL--TSEVVNFKHPYTGDTALHVAVNSPYPKRKQIIELLIRKG-- 387
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
+ L +N TPLH+AA N + ++LL HGA + A G T LH + ++
Sbjct: 388 -IHLNEKNKDFLTPLHLAADNSHLDLMEVLLRHGAKVNALDGLGQTALHRCT----KDDN 442
Query: 135 YATVKTLLEYNADCSAKDNEGKT 157
+ LL YN D S +G T
Sbjct: 443 VQACRLLLSYNVDPSIVSLQGYT 465
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 57 TPLHFAAGYGRRDVVEFLLSAGASIQARDDGGLHPLHNACSFGHAD----VVRLLLEAGA 112
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELEN 203
+ + +DN TPL H + G + LL H E SE K +D +N
Sbjct: 113 NPNTRDNWNYTPL-HEAAIKGKVDVCIALLQHGAEPDITN-----SEGKTPLDVADN 163
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + +LLL HGA + AK G+ PLH + Y +
Sbjct: 199 VNCHASDGRRSTPLHLAAGYNRSRVVQLLLQHGADVHAKDKGGLVPLHNACSYG----HF 254
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ L+++ A+ +A D TPL
Sbjct: 255 EVTEMLIKHGANVNANDLWAFTPL 278
>gi|348172735|ref|ZP_08879629.1| putative sporulation protein (partial match) [Saccharopolyspora
spinosa NRRL 18395]
Length = 1140
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 7/123 (5%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
+ EQ + A + + + L +EL+++VGL ++K ++ + + ERR A+GL +
Sbjct: 566 TAEQEGKPPESASRKFEGPLGGLLDELNSLVGLADVKREVEILTRLEQMAERRAAVGLPM 625
Query: 239 GARRPP---HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG 295
PP H+ F G PGTGKT VAR+ G++L +G+L T ++ EV R DLV VG T
Sbjct: 626 ----PPMSRHLVFTGAPGTGKTTVARLYGKILAELGVLRTGQLVEVGRADLVASIVGGTA 681
Query: 296 PKT 298
KT
Sbjct: 682 LKT 684
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
K++ L N+L +VGL E+K ++ + +R+A GL V + H+ F G PGTGK
Sbjct: 867 KVEALLNKLQQMVGLAEVKSEVSNMVDLLASAGQRQAAGLPVPSLSR-HLIFGGPPGTGK 925
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T VAR+ G +L +G+L +V EV R +LVGE+VGHT +T
Sbjct: 926 TTVARLYGEILASLGVLQRGQVVEVGRANLVGEYVGHTAQRT 967
>gi|300115286|ref|YP_003761861.1| CbbX protein [Nitrosococcus watsonii C-113]
gi|299541223|gb|ADJ29540.1| CbbX protein [Nitrosococcus watsonii C-113]
Length = 316
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S + +D+L+ EL +GL +K ++R+ A +L+D R+ L + P HM F
Sbjct: 30 ASNIQEVLDKLDREL---IGLKPIKTRIREIAALLLVDRLRRQFELT--SETPTLHMNFT 84
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA +G +L +G + + V R DLVG+++GHT PKT+
Sbjct: 85 GNPGTGKTTVALRMGEILKRLGYVREGHLVTVTRDDLVGQYIGHTAPKTK 134
>gi|371721795|gb|AEX55220.1| ankyrin domain protein, partial [Wolbachia pipientis]
Length = 676
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 9/112 (8%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH + +N E VK+LL N V + A++ G TPLH+AA+ GC + K+L+A GA +
Sbjct: 254 LHSAVKHNNEEEVKNLL----NKGVNVNAKDDDGCTPLHLAAREGCEDVVKILIAKGANV 309
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
AK ++G TPLHL+ R VK L+ A+ +AKD++G TPL HL+
Sbjct: 310 NAKDDDGCTPLHLAA----REGCEDVVKILIAKGANVNAKDDDGCTPL-HLA 356
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 77/131 (58%), Gaps = 11/131 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N E+VK L+E K ++ ++ TPLH+AA+NG + K L+A GA
Sbjct: 416 TALHLAAENNHIEVVKILVE-----KADVNIKDADRWTPLHLAAENGHEDIVKTLIAKGA 470
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK + TPLHL+ ++ VKTL+ A+ +A + + +TPL HL+ G
Sbjct: 471 KVKAKNGDRRTPLHLAA----KNGHEDVVKTLIAKGAEVNANNGDRRTPL-HLAAENGKI 525
Query: 170 KLRELLLWHSE 180
K+ E+LL H+E
Sbjct: 526 KVVEVLL-HTE 535
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 12/113 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A +IVK+L+ +++A+N TPLH+AAKNG + K L+A GA
Sbjct: 448 TPLHLAAENGHEDIVKTLIAKGA----KVKAKNGDRRTPLHLAAKNGHEDVVKTLIAKGA 503
Query: 110 FIEAKANNG--MTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
E ANNG TPLHL+ + V+ LL AD S KD +GKTP D
Sbjct: 504 --EVNANNGDRRTPLHLAA----ENGKIKVVEVLLHTEADPSLKDVDGKTPRD 550
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ A+ + ETPLH+AA+ G + +L+ GA
Sbjct: 351 TPLHLAAENNHIEVVKILVE-----KADVNAEGIVDETPLHLAAREGHKDVVDILIKKGA 405
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ ++ T LHL+ + VK L+E AD + KD + TPL HL+ G
Sbjct: 406 KVNAENDDRCTALHLAA----ENNHIEVVKILVEK-ADVNIKDADRWTPL-HLAAENGHE 459
Query: 170 KLRELLL 176
+ + L+
Sbjct: 460 DIVKTLI 466
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 25/147 (17%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH++ EIV+ L + G + ++A+N G TPLH+AA NG + + L+ GA
Sbjct: 161 PLHLAITNGHKEIVQVLSKAEG---INVDAKNSDGWTPLHLAAANGREDIVETLIEKGAD 217
Query: 111 IEAKANNGMTPLHL---------------------SVWYSIRSEDYATVKTLLEYNADCS 149
+ AK + TPL ++ +++ + VK LL + +
Sbjct: 218 VNAKDHYKWTPLTFAFQKGHEVVKGALLKAQENIKALHSAVKHNNEEEVKNLLNKGVNVN 277
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLL 176
AKD++G TPL HL+ G + ++L+
Sbjct: 278 AKDDDGCTPL-HLAAREGCEDVVKILI 303
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ +N A + K+L+E + ++ A++ TPLH+AA G + +L GA +
Sbjct: 63 LHLASYWNCANVAKALIE----NGADINAEHDNKITPLHIAAHYGHEDVVTILTGKGAIV 118
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
+AK +G T LH +++ V TL+ A+ +A++++G PL HL+ G ++
Sbjct: 119 DAKNGDGWTSLH----FAVEKNHENVVNTLIGKGANVNAENDKGWAPL-HLAITNGHKEI 173
Query: 172 RELL 175
++L
Sbjct: 174 VQVL 177
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 34/140 (24%)
Query: 50 TPLHVSAGYNKAEIVK------SLLEWPGND-----------------------KVELEA 80
TPLH++A Y ++V ++++ D + A
Sbjct: 94 TPLHIAAHYGHEDVVTILTGKGAIVDAKNGDGWTSLHFAVEKNHENVVNTLIGKGANVNA 153
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
+N G PLH+A NG E ++L A G ++AK ++G TPLHL+ ED V+
Sbjct: 154 ENDKGWAPLHLAITNGHKEIVQVLSKAEGINVDAKNSDGWTPLHLAAANG--REDI--VE 209
Query: 140 TLLEYNADCSAKDNEGKTPL 159
TL+E AD +AKD+ TPL
Sbjct: 210 TLIEKGADVNAKDHYKWTPL 229
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH++A ++VK+L+ E+ A N TPLH+AA+NG + ++LL
Sbjct: 480 RTPLHLAAKNGHEDVVKTLIAKGA----EVNANNGDRRTPLHLAAENGKIKVVEVLLHTE 535
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
A K +G TP L+ + I ++ L E + K+ KTP D N
Sbjct: 536 ADPSLKDVDGKTPRDLTKYQGI-------IQLLEEAEKKQTLKNENKKTPKDLTEN 584
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A ++VK L+ N + A++ G TPLH+AA+N E K+L+ A
Sbjct: 318 TPLHLAAREGCEDVVKILIAKGAN----VNAKDDDGCTPLHLAAENNHIEVVKILV-EKA 372
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
+ A+ TPLHL+ R V L++ A +A++++ T L HL+
Sbjct: 373 DVNAEGIVDETPLHLAA----REGHKDVVDILIKKGAKVNAENDDRCTAL-HLA 421
>gi|294628297|ref|ZP_06706857.1| ATPase [Streptomyces sp. e14]
gi|292831630|gb|EFF89979.1| ATPase [Streptomyces sp. e14]
Length = 623
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPG 253
A +++ EL +VGL +K Q++ + + + R GL V +PP H F G G
Sbjct: 334 ALLEQALAELERMVGLEPVKRQVKALSAQLNMARLRAGQGLPV---QPPKRHFVFSGPSG 390
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLT 313
TGKT VARILGR+ Y +G+L D + E QR DLVGE++G T K + S I +
Sbjct: 391 TGKTTVARILGRVFYALGLLGGDHLVEAQRADLVGEYLGQTAVKANELID---SAIGGVL 447
Query: 314 FI 315
F+
Sbjct: 448 FV 449
>gi|414164376|ref|ZP_11420623.1| protein CbbX [Afipia felis ATCC 53690]
gi|410882156|gb|EKS29996.1| protein CbbX [Afipia felis ATCC 53690]
Length = 307
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+++L+ EL +GL +K ++R+ A +L++ R+ +GL A P HM+F GNPGTGK
Sbjct: 30 LEQLDQEL---IGLAPVKTRIREIASLLLIERIRQRMGLT--AETPTLHMSFTGNPGTGK 84
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 85 TTVALRIASILHKLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 127
>gi|189183205|ref|YP_001936990.1| ankyrin repeat-containing protein 09 [Orientia tsutsugamushi str.
Ikeda]
gi|189179976|dbj|BAG39756.1| ankyrin repeat-containing protein 09 [Orientia tsutsugamushi str.
Ikeda]
Length = 422
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 81/145 (55%), Gaps = 14/145 (9%)
Query: 20 CAQSGDLLAFQRLLRE---NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
CA + L RLL +P+L ++ + +PLH + N AEIVK LL++ +V
Sbjct: 62 CAIETETLDIVRLLLNAGADPNLYDD----LHFSPLHKACIRNNAEIVKLLLDY----EV 113
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ QN++G TPLH AA++G KLLL H A ++ + ++G TPL+ + Y R
Sbjct: 114 DINIQNIWGNTPLHYAARHGLPSIVKLLLNHRAIVDLQNSSGHTPLYDVIAYG-RGGSSC 172
Query: 137 T--VKTLLEYNADCSAKDNEGKTPL 159
T ++ LL A+ +A D+ G TPL
Sbjct: 173 TQVIEILLNTGANVNAVDDSGDTPL 197
>gi|77163862|ref|YP_342387.1| AAA ATPase [Nitrosococcus oceani ATCC 19707]
gi|254435708|ref|ZP_05049215.1| CbbX protein [Nitrosococcus oceani AFC27]
gi|76882176|gb|ABA56857.1| AAA ATPase [Nitrosococcus oceani ATCC 19707]
gi|207088819|gb|EDZ66091.1| CbbX protein [Nitrosococcus oceani AFC27]
Length = 320
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S + +D+L+ EL +GL +K ++R+ A +L+D R+ L + P HM F
Sbjct: 35 ASNIQEVLDKLDREL---IGLKPIKTRIREIAALLLVDRLRRQFELT--SETPTLHMNFT 89
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA +G +L +G + + V R DLVG+++GHT PKT+
Sbjct: 90 GNPGTGKTTVALRMGEILKRLGYVREGHLVTVTRDDLVGQYIGHTAPKTK 139
>gi|406896872|gb|EKD41001.1| AAA ATPase central protein, partial [uncultured bacterium]
Length = 288
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 168 SAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLL 227
+A + ++ E ++K R L C N+L+ +VGL +K ++ + ++
Sbjct: 31 AAPMPKIEFSDKEAKKKERTLADCI----------NDLNALVGLDGVKREISALQEFVVA 80
Query: 228 DERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLV 287
+RRK GL G HM F G+PGTGKT VARI+G + Y +G+L E R LV
Sbjct: 81 MQRRKKEGLATGPL-TLHMVFTGSPGTGKTTVARIIGEMFYQLGLLAKGHTVETDRAGLV 139
Query: 288 GEFVGHTGPKTRRRVGHLLSEITCL 312
+VG T KT+ + L + +
Sbjct: 140 ASYVGQTATKTKEVIQSALGGVLFI 164
>gi|449681053|ref|XP_002157700.2| PREDICTED: ankyrin-2-like [Hydra magnipapillata]
Length = 1045
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++ +N+ E+VK LL++ N+ ++ G TPLH+AA G A+ LLA GA
Sbjct: 620 TPLHLAVRFNQLEVVKRLLKYGANNSSSTQS----GYTPLHLAALYGHLSVAESLLADGA 675
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+EAK NG TPLH++ +Y ED ++ LL+YNA +A + +G + L
Sbjct: 676 EVEAKTKNGNTPLHIATYYC--HED--IIQLLLKYNAPPNALNKDGYSSL 721
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+SA N+ IV LL+ VE E G +PLH+AA++G E LLL +GA
Sbjct: 554 TPLHISAKKNQINIVSILLDR----GVEAEQTTKSGISPLHLAAQHGNVEILDLLLDNGA 609
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ NG+TPLHL+V R VK LL+Y A+ S+ G TPL HL+ G
Sbjct: 610 SPGVQTYNGLTPLHLAV----RFNQLEVVKRLLKYGANNSSSTQSGYTPL-HLAALYGHL 664
Query: 170 KLRELLLWHSEE 181
+ E LL E
Sbjct: 665 SVAESLLADGAE 676
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 10/132 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N+ IV+ LL++ KV +EA+N G+T LH+AA G LLL GA
Sbjct: 389 TALHIAAKRNQESIVQLLLKY----KVMVEAKNNNGQTALHVAAFFGHANIVLLLLQEGA 444
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
IEA T LH++ R+ + LL A+ + K + +TPL H + G+A
Sbjct: 445 AIEAVTTREETVLHIAC----RASQIQIARLLLRNGANVNVKSKDEETPL-HNACRQGNA 499
Query: 170 KLRELLL-WHSE 180
L LLL +H++
Sbjct: 500 LLVNLLLDFHAD 511
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A HGC +A + L +N + LN + P+HV++ + + ++ +L+E G
Sbjct: 229 AAKHGC------VAATKCLIDNGADLNAQAKYNI-CPIHVASKHGEVGVLAALIE--GGA 279
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
K+ + ++ G +PLH AA+ G + +LLL HG I AK NG+T LH++ +
Sbjct: 280 KLSVVTKD--GLSPLHCAAREGHSHCVELLLVHGVTITAKTKNGLTALHMAS----QGNH 333
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ + +L + A +G TPL H + G +LL+ + KR
Sbjct: 334 VQSAQHILAHGAHIDDSTIDGVTPL-HTTAHYGHVATCKLLIEKGADIDKR 383
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 9/115 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QT LHV+A + A IV LL+ + +EA ET LH+A + + A+LLL +G
Sbjct: 421 QTALHVAAFFGHANIVLLLLQ----EGAAIEAVTTREETVLHIACRASQIQIARLLLRNG 476
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
A + K+ + TPLH + R + V LL+++AD +A + G TPL HL+
Sbjct: 477 ANVNVKSKDEETPLH----NACRQGNALLVNLLLDFHADPNATNKNGLTPL-HLA 526
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 27 LAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGE 86
+ RLL N + +N ++ +TPLH + A +V LL++ + A N G
Sbjct: 466 IQIARLLLRNGANVNVKSK-DEETPLHNACRQGNALLVNLLLDFHADPN----ATNKNGL 520
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+A +AA LL GA + A A NG TPLH+S + V LL+
Sbjct: 521 TPLHLACHYDKPDAAVKLLDSGADLHAVAKNGYTPLHISA----KKNQINIVSILLDRGV 576
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ G +PL HL+ G+ ++ +LLL
Sbjct: 577 EAEQTTKSGISPL-HLAAQHGNVEILDLLL 605
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
+HV+ + ++K L++ N + +A N Y PLH+AAK+GC A K L+ +GA +
Sbjct: 193 IHVATRKDDIRMIKLLIDHKCN--INEKANNGYA--PLHIAAKHGCVAATKCLIDNGADL 248
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
A+A + P+H++ + + + L+E A S +G +PL H + G +
Sbjct: 249 NAQAKYNICPIHVASKHG----EVGVLAALIEGGAKLSVVTKDGLSPL-HCAAREGHSHC 303
Query: 172 RELLLWH 178
ELLL H
Sbjct: 304 VELLLVH 310
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 32/152 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKV-------------------------ELEAQNMY 84
TPL+++A N +IV +LL+ + + E EA+N
Sbjct: 131 TPLYMAAQENHCDIVSALLKNGADPHIPAKGGFEPVDIAVQQGHTSILITLLEFEAKN-- 188
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G +H+A + KLL+ H I KANNG PLH++ + A K L++
Sbjct: 189 GFRAIHVATRKDDIRMIKLLIDHKCNINEKANNGYAPLHIAAKHGC----VAATKCLIDN 244
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AD +A+ P+ H+++ G + L+
Sbjct: 245 GADLNAQAKYNICPI-HVASKHGEVGVLAALI 275
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H + L +RLL+ + N + TPLH++A Y + +SLL D
Sbjct: 622 LHLAVRFNQLEVVKRLLKYGAN--NSSSTQSGYTPLHLAALYGHLSVAESLLA----DGA 675
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
E+EA+ G TPLH+A + +LLL + A A +G + L+++
Sbjct: 676 EVEAKTKNGNTPLHIATYYCHEDIIQLLLKYNAPPNALNKDGYSSLYIA 724
>gi|123506042|ref|XP_001329113.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121912064|gb|EAY16890.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 1174
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ ETPL AA + E A++L++H
Sbjct: 811 GQTPLHITALKNSKETAEILISHGAN----VNAKDEDNETPLQNAAYSNSKETAEILISH 866
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I AK +G TPLH++ + + T + L+ + A+ +AKD +G+TPL H++
Sbjct: 867 GANINAKDKDGQTPLHITALKNSKE----TAEILISHGANINAKDKDGQTPL-HITALKN 921
Query: 168 SAKLRELLLWH 178
S + E+L+ H
Sbjct: 922 SKETAEILISH 932
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ ETPL AA + E A++L++H
Sbjct: 910 GQTPLHITALKNSKETAEILISHGAN----VNAKDEDNETPLQNAAYSNSKETAEILISH 965
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I AK +G TPLH++ + + T + L+ + A+ +AKD +G+TPL H++
Sbjct: 966 GANINAKDKDGQTPLHITALKNSKE----TAEILISHGANINAKDKDGQTPL-HITALKN 1020
Query: 168 SAKLRELLLWH 178
S + E+L+ H
Sbjct: 1021 SKETAEILISH 1031
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ G+TPLH+ A E A++L++H
Sbjct: 976 GQTPLHITALKNSKETAEILISHGAN----INAKDKDGQTPLHITALKNSKETAEILISH 1031
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
GA + AK + TPLH + + S T K L+ + AD +AKD + +TPL H
Sbjct: 1032 GANVNAKDEDNETPLHKAAY----SNSKETAKVLISHGADINAKDQDDETPLHH 1081
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ ETPLH AA + E A+ L++H
Sbjct: 646 GQTPLHITALKNSKETAEILISHGAN----VNAKDEDNETPLHKAAYSNSKETAEFLISH 701
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA + AK + TPLH + + S T + L+ + A+ +AKD +G+TPL H++
Sbjct: 702 GANVNAKDKDNGTPLHNAAY----SNSKETAEILISHGANINAKDKDGQTPL-HITALKN 756
Query: 168 SAKLRELLLWH 178
S + E+L+ H
Sbjct: 757 SKETAEILISH 767
Score = 74.3 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YN E + L+ N + A++ G+TPLH AA E A++L++HGA
Sbjct: 318 TPLHQAAYYNSKETAEILISHGAN----INAKDKDGQTPLHEAALKNSKETAEILISHGA 373
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH++ + + T + L+ + A+ +AKD + +TPL + + S
Sbjct: 374 NINAKDKDGQTPLHITALKNSKE----TAEILISHGANVNAKDEDNETPLQNAAYS-NSK 428
Query: 170 KLRELLLWH 178
+ E+L+ H
Sbjct: 429 ETAEILISH 437
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ ETPLH AA + E A++L++H
Sbjct: 745 GQTPLHITALKNSKETAEILISHGAN----VNAKDEDNETPLHNAAYSNSKETAEILISH 800
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I AK +G TPLH++ + + T + L+ + A+ +AKD + +TPL + +
Sbjct: 801 GANINAKDKDGQTPLHITALKNSKE----TAEILISHGANVNAKDEDNETPLQNAAYS-N 855
Query: 168 SAKLRELLLWH 178
S + E+L+ H
Sbjct: 856 SKETAEILISH 866
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A N E + L+ N + A++ ETPL AA + E A++L++HG
Sbjct: 548 ETPLHKAAYSNSKETAEILISHGAN----VNAKDEDNETPLQNAAYSNSKETAEILISHG 603
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK +G TPLH++ + + T + L+ + A+ +AKD +G+TPL H++ S
Sbjct: 604 ANINAKDKDGQTPLHITALKNSKE----TAEILISHGANINAKDKDGQTPL-HITALKNS 658
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 659 KETAEILISH 668
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ ETPL AA + E A++L++H
Sbjct: 382 GQTPLHITALKNSKETAEILISHGAN----VNAKDEDNETPLQNAAYSNSKETAEILISH 437
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I AK + TPLH + + S T + L+ + A+ +AKD + +TPL H +
Sbjct: 438 GANINAKDKDNGTPLHNAAY----SNSKETAEILISHGANVNAKDEDNETPL-HKAAYSN 492
Query: 168 SAKLRELLLWH 178
S + E+L+ H
Sbjct: 493 SKETAEILISH 503
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL +A N E + L+ N + A++ G+TPLH+ A E A++L++HG
Sbjct: 581 ETPLQNAAYSNSKETAEILISHGAN----INAKDKDGQTPLHITALKNSKETAEILISHG 636
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK +G TPLH++ + + T + L+ + A+ +AKD + +TPL H + S
Sbjct: 637 ANINAKDKDGQTPLHITALKNSKE----TAEILISHGANVNAKDEDNETPL-HKAAYSNS 691
Query: 169 AKLRELLLWH 178
+ E L+ H
Sbjct: 692 KETAEFLISH 701
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A N E + L+ N + A++ TPLH AA + E A++L++HG
Sbjct: 680 ETPLHKAAYSNSKETAEFLISHGAN----VNAKDKDNGTPLHNAAYSNSKETAEILISHG 735
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK +G TPLH++ + + T + L+ + A+ +AKD + +TPL H + S
Sbjct: 736 ANINAKDKDGQTPLHITALKNSKE----TAEILISHGANVNAKDEDNETPL-HNAAYSNS 790
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 791 KETAEILISH 800
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL +A N E + L+ N + A++ G+TPLH+ A E A++L++HG
Sbjct: 845 ETPLQNAAYSNSKETAEILISHGAN----INAKDKDGQTPLHITALKNSKETAEILISHG 900
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK +G TPLH++ + + T + L+ + A+ +AKD + +TPL + + S
Sbjct: 901 ANINAKDKDGQTPLHITALKNSKE----TAEILISHGANVNAKDEDNETPLQNAAYS-NS 955
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 956 KETAEILISH 965
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL +A N E + L+ N + A++ G+TPLH+ A E A++L++HG
Sbjct: 944 ETPLQNAAYSNSKETAEILISHGAN----INAKDKDGQTPLHITALKNSKETAEILISHG 999
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK +G TPLH++ + + T + L+ + A+ +AKD + +TPL H + S
Sbjct: 1000 ANINAKDKDGQTPLHITALKNSKE----TAEILISHGANVNAKDEDNETPL-HKAAYSNS 1054
Query: 169 AKLRELLLWHSEE 181
+ ++L+ H +
Sbjct: 1055 KETAKVLISHGAD 1067
Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL +A N E + L+ N + A++ ETPLH AA + E A++L++HG
Sbjct: 515 ETPLQNAAYSNSKETAEILISHGAN----INAKDKDNETPLHKAAYSNSKETAEILISHG 570
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK + TPL + + S T + L+ + A+ +AKD +G+TPL H++ S
Sbjct: 571 ANVNAKDEDNETPLQNAAY----SNSKETAEILISHGANINAKDKDGQTPL-HITALKNS 625
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 626 KETAEILISH 635
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
I+ SL+E+ + A+ G TPLH AA E A++L++HGA I AK +G TPL
Sbjct: 294 ILPSLVEYFISHGANANAKTNSGITPLHQAAYYNSKETAEILISHGANINAKDKDGQTPL 353
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
H + + + T + L+ + A+ +AKD +G+TPL H++ S + E+L+ H
Sbjct: 354 HEAALKNSKE----TAEILISHGANINAKDKDGQTPL-HITALKNSKETAEILISH 404
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QTPLH++A N E + L+ N + A++ ETPLH AA + E AK+L++H
Sbjct: 1009 GQTPLHITALKNSKETAEILISHGAN----VNAKDEDNETPLHKAAYSNSKETAKVLISH 1064
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGK 156
GA I AK + TPLH ++ ++ T K L+ + AD +AK GK
Sbjct: 1065 GADINAKDQDDETPLH----HAALNKSKETAKVLISHGADINAKGKYGK 1109
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A N E + L+ N + A++ ETPL AA + E A++L++HG
Sbjct: 482 ETPLHKAAYSNSKETAEILISHGAN----VNAKDEDNETPLQNAAYSNSKETAEILISHG 537
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK + TPLH + + S T + L+ + A+ +AKD + +TPL + + S
Sbjct: 538 ANINAKDKDNETPLHKAAY----SNSKETAEILISHGANVNAKDEDNETPLQNAAYS-NS 592
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 593 KETAEILISH 602
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL +A N E + L+ N + A++ TPLH AA + E A++L++HG
Sbjct: 416 ETPLQNAAYSNSKETAEILISHGAN----INAKDKDNGTPLHNAAYSNSKETAEILISHG 471
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK + TPLH + + S T + L+ + A+ +AKD + +TPL + + S
Sbjct: 472 ANVNAKDEDNETPLHKAAY----SNSKETAEILISHGANVNAKDEDNETPLQNAAYS-NS 526
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 527 KETAEILISH 536
>gi|126348291|emb|CAJ90012.1| putative sporulation protein K-like protein [Streptomyces
ambofaciens ATCC 23877]
Length = 833
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 163 SNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWA 222
+ GP + L + S EQ A E + EL +VGL +K ++R
Sbjct: 532 TTGPSTGLLGSIPGQRSTEQESLIADAGPQEPARTSKAVLGELDALVGLDSVKREVRALT 591
Query: 223 KGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQ 282
+ + RR+ GLK + + H+ F G+PGTGKT VAR+ G +L +G+L + EV
Sbjct: 592 DMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARLYGEILASLGVLDKGHLVEVS 650
Query: 283 RTDLVGEFVGHTGPKTR 299
R DLVGE +G T +T+
Sbjct: 651 RVDLVGEHIGSTAIRTQ 667
>gi|429750614|ref|ZP_19283632.1| stage V sporulation protein K family protein [Capnocytophaga sp.
oral taxon 332 str. F0381]
gi|429164310|gb|EKY06453.1| stage V sporulation protein K family protein [Capnocytophaga sp.
oral taxon 332 str. F0381]
Length = 370
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++EL EL+ ++GL ++K ++ + RK LK A H+AF+GNPGTGKT
Sbjct: 100 LEELMAELNTLIGLQKVKQKVTDLIAYKKVQSLRKQYKLKT-ASSTLHLAFIGNPGTGKT 158
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+G + +GIL EV RTDL+ + G T K ++ V
Sbjct: 159 TVARIVGLIYKQLGILSKGHFIEVSRTDLIAGYQGQTALKVKKVV 203
>gi|167967062|ref|ZP_02549339.1| ATPase, AAA family protein [Mycobacterium tuberculosis H37Ra]
Length = 404
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 98 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 156
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 157 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 216
Query: 309 ITCL 312
+ L
Sbjct: 217 VLFL 220
>gi|15839668|ref|NP_334705.1| ATPase AAA [Mycobacterium tuberculosis CDC1551]
gi|308375118|ref|ZP_07442755.2| hypothetical protein TMGG_03286 [Mycobacterium tuberculosis
SUMu007]
gi|449062279|ref|YP_007429362.1| ATPase AAA [Mycobacterium bovis BCG str. Korea 1168P]
gi|13879789|gb|AAK44519.1| ATPase, AAA family [Mycobacterium tuberculosis CDC1551]
gi|308347411|gb|EFP36262.1| hypothetical protein TMGG_03286 [Mycobacterium tuberculosis
SUMu007]
gi|449030787|gb|AGE66214.1| ATPase AAA [Mycobacterium bovis BCG str. Korea 1168P]
Length = 613
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 307 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 365
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 366 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 425
Query: 309 ITCL 312
+ L
Sbjct: 426 VLFL 429
>gi|455643059|gb|EMF22204.1| sporulation protein K-like protein [Streptomyces gancidicus BKS
13-15]
Length = 814
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
ET+ D L EL +VGL +K ++R + + RR+ GLK + + H+ F G+P
Sbjct: 544 ETRTSKDVL-GELDALVGLESVKREVRALTDMIEVGRRRQKAGLKAASVKR-HLVFTGSP 601
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 602 GTGKTTVARLYGEILASLGVLEQGHLVEVSRVDLVGEHIGSTAIRTQ 648
>gi|15828368|ref|NP_302631.1| hypothetical protein ML2537 [Mycobacterium leprae TN]
gi|221230845|ref|YP_002504261.1| hypothetical protein MLBr_02537 [Mycobacterium leprae Br4923]
gi|15214349|sp|Q9CD28.1|Y2537_MYCLE RecName: Full=Uncharacterized protein ML2537
gi|13093798|emb|CAC32068.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933952|emb|CAR72636.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length = 640
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 333 AAHERKAVLLHEAERQLAEFIGLDEVKNQVSRLKSSVAMELVRKQRGLMV-AQRAHHLVF 391
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 392 AGPPGTGKTTIARVVAKVYCGLGLLKKENIREVHRADLIGQHIGETEAKTNAVIDSALDG 451
Query: 309 ITCL 312
+ L
Sbjct: 452 VLFL 455
>gi|239986370|ref|ZP_04707034.1| putative ATPase [Streptomyces roseosporus NRRL 11379]
gi|291443317|ref|ZP_06582707.1| ATPase [Streptomyces roseosporus NRRL 15998]
gi|291346264|gb|EFE73168.1| ATPase [Streptomyces roseosporus NRRL 15998]
Length = 634
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
+L +VGL +K Q++ + + + R GL V +PP H F G GTGKT VAR
Sbjct: 348 QLERMVGLEPVKRQVKALSAQLNMARLRAEQGLPV---QPPKRHFVFSGPSGTGKTTVAR 404
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
ILGR+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 405 ILGRVFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 452
>gi|91076368|ref|XP_967640.1| PREDICTED: similar to tankyrase [Tribolium castaneum]
Length = 1166
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+SGDL QRLL P+ +N R+ TPLH ++GYN+ +V+ LLE ++
Sbjct: 496 AKSGDLEQVQRLLETYPNTVNCRDLDGRHSTPLHFASGYNRVAVVEYLLEQ----GADVH 551
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + S + + Y VK
Sbjct: 552 AKDKGGLVPLHNACSYGHYEVTELLVKHGANVNVADLWKFTPLHEA---SAKGK-YEIVK 607
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL++ AD + K+ +G T LD + G
Sbjct: 608 LLLKHGADPTKKNRDGATALDLVREG 633
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 21 AQSGDLLAFQRLLRE---NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVE 77
A+ G+L QRL+ N + RN TPLH++AGYN E+ + LLE +
Sbjct: 651 AKKGNLARIQRLITAENINCRDVQGRN----STPLHLAAGYNNVEVAEYLLEH----GAD 702
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
+ AQ+ G PLH A+ G + A LL+ + + A G TPLH + R++
Sbjct: 703 VNAQDKGGLIPLHNASSYGHLDIAALLIKYNTVVNATDKWGFTPLHEAAQKG-RTQ---L 758
Query: 138 VKTLLEYNADCSAKDNEGKTPLD 160
LL + AD K+ EG+TP+D
Sbjct: 759 CALLLAHGADPFLKNQEGQTPMD 781
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 69/147 (46%), Gaps = 21/147 (14%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN++ +V+ LL+ ++ A++ G PLH A G E ++L+ HGA
Sbjct: 210 TPLHLAAGYNRSRVVQLLLQH----GADVHAKDKGGLVPLHNACSYGHFEVTEMLIKHGA 265
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD---HLSNGP 166
+ A TPLH A K+ LE CS +EG P H +
Sbjct: 266 NVNANDLWAFTPLH-----------EAASKSRLEV---CSLLLSEGADPTQLNCHSKSAI 311
Query: 167 GSAKLRELLLWHSEEQRKRRALEACSE 193
A REL S E R + L+AC +
Sbjct: 312 DVAPTRELQERLSCEYRGHQLLDACKQ 338
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 24 GDLLAFQRLLRENPSLLNERNPV-MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQN 82
GD+ ++L+ P +N R+ TPLH +AGY + ++V+ LL ++A++
Sbjct: 32 GDISRVRKLV--TPQTVNARDTAGRKSTPLHFAAGYGRRDVVEFLLSA----GASIQARD 85
Query: 83 MYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL 142
G PLH A G + +LLL GA + N TPLH + +I+ + + LL
Sbjct: 86 DGGLHPLHNACSFGHADVVRLLLEAGANPNTRDNWNYTPLHEA---AIKGKVDVCI-ALL 141
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEA 190
++ A+ ++EGKTPLD N R +L + E RK LEA
Sbjct: 142 QHGAEPDITNSEGKTPLDVADN-----STRAVL---TGEYRKDELLEA 181
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH+AA E A+ LL HGA + A+ G+ PLH + Y D A + L++YN
Sbjct: 679 TPLHLAAGYNNVEVAEYLLEHGADVNAQDKGGLIPLHNASSYG--HLDIAAL--LIKYNT 734
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+A D G TPL H + G +L LLL H +
Sbjct: 735 VVNATDKWGFTPL-HEAAQKGRTQLCALLLAHGAD 768
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAG--YNKAEIVKSLLEWPGND 74
+ C Q+ D ++ L ++N ++P T LHV+ Y K + + LL G
Sbjct: 333 LDACKQA-DTTKLKKFL--TSEVVNFKHPYTGDTALHVAVNSPYPKRKQIIELLIRKG-- 387
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
+ L +N TPLH+AA N + ++LL HGA + A G T LH + ++
Sbjct: 388 -IHLNEKNKDFLTPLHLAADNSHLDLMEVLLRHGAKVNALDGLGQTALHRCT----KDDN 442
Query: 135 YATVKTLLEYNADCSAKDNEGKT 157
+ LL YN D S +G T
Sbjct: 443 VQACRLLLSYNVDPSIVSLQGYT 465
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 10/117 (8%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA G + + LL+ GA I+A+ + G+ PLH + + V+ LLE A
Sbjct: 57 TPLHFAAGYGRRDVVEFLLSAGASIQARDDGGLHPLHNACSFGHAD----VVRLLLEAGA 112
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELEN 203
+ + +DN TPL H + G + LL H E SE K +D +N
Sbjct: 113 NPNTRDNWNYTPL-HEAAIKGKVDVCIALLQHGAEPDITN-----SEGKTPLDVADN 163
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA + +LLL HGA + AK G+ PLH + Y +
Sbjct: 199 VNCHASDGRRSTPLHLAAGYNRSRVVQLLLQHGADVHAKDKGGLVPLHNACSYG----HF 254
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
+ L+++ A+ +A D TPL
Sbjct: 255 EVTEMLIKHGANVNANDLWAFTPL 278
>gi|29827972|ref|NP_822606.1| sporulation protein K-like protein [Streptomyces avermitilis
MA-4680]
gi|29605073|dbj|BAC69141.1| putative sporulation protein K-like protein [Streptomyces
avermitilis MA-4680]
Length = 812
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG-ARRPPHMAFLGNPGTGKTMVAR 261
EL +VGL +K ++R + + RR+ GLK ARR H+ F G+PGTGKT VAR
Sbjct: 551 GELDTLVGLESVKREVRALTDMIEVGRRRQQAGLKAASARR--HLVFTGSPGTGKTTVAR 608
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 609 LYGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 646
>gi|433629376|ref|YP_007263004.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140070010]
gi|432160969|emb|CCK58304.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140070010]
Length = 631
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|411007300|ref|ZP_11383629.1| AAA ATPase central domain-containing protein [Streptomyces
globisporus C-1027]
Length = 1098
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
+E K LE EL ++VGL E+K Q+R L++RR LG+ V A+ H+ F G
Sbjct: 544 AEKKGPEGPLE-ELESLVGLAEVKSQVRNLVNLNQLNQRRAQLGMPV-AQVSRHLVFSGP 601
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
PGTGKT VAR+ G +L +G+L + + EV R DLV + +G T KT
Sbjct: 602 PGTGKTTVARLYGGILADLGVLRSGHLVEVSRADLVAQVIGGTAIKT 648
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+EL +L +++GL +K ++ + ++RKA GL + H+ F G PGTGKT
Sbjct: 828 EELLAQLHSMIGLTAVKNEVTALVNLLTATKQRKAAGLPT-PKISNHLIFSGPPGTGKTT 886
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+AR+ LL +G+LP ++ EV R DLVG +VGHT T+
Sbjct: 887 IARLYADLLRSLGVLPKGQLVEVARADLVGRYVGHTAQLTK 927
>gi|433640418|ref|YP_007286177.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140070008]
gi|432156966|emb|CCK54235.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140070008]
Length = 631
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|224139114|ref|XP_002326771.1| predicted protein [Populus trichocarpa]
gi|222834093|gb|EEE72570.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 23/231 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A +H ++SGD+ A + ++ NP +N R+ ++TPLH++A +AE V L +
Sbjct: 14 AELHAASRSGDMKAMETIVSSNPLAINSRDK-HSRTPLHLAAWSGQAEAVTYLCKH---- 68
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
K ++ A M +H A++ G E + LL+ GA I+A G+TPLH Y ++
Sbjct: 69 KADVGAAAMDDMGAIHFASQKGHLEVVRTLLSSGASIKASTRKGLTPLH----YGVQGSH 124
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEA---- 190
VK L++ A + + G TPLD +N ++R L L SE+ K+ L
Sbjct: 125 LELVKYLVKKGASLTVRTKAGMTPLDLATN----EEIR-LFLEESEKTSKKETLNGKDKA 179
Query: 191 -CSETKAKMDELENELSN---IVGLHELKIQLRKWAKGMLLDERRKALGLK 237
SE K +++ ++E S G HE ++ KG D + + LK
Sbjct: 180 EVSEPKTSLED-KSEYSGGEATAGEHEEQVNESVKRKGEADDTKETSSELK 229
>gi|254549229|ref|ZP_05139676.1| hypothetical protein Mtube_01986 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|297632770|ref|ZP_06950550.1| hypothetical protein MtubK4_01526 [Mycobacterium tuberculosis KZN
4207]
gi|297729745|ref|ZP_06958863.1| hypothetical protein MtubKR_01556 [Mycobacterium tuberculosis KZN
R506]
gi|306774379|ref|ZP_07412716.1| hypothetical protein TMAG_03651 [Mycobacterium tuberculosis
SUMu001]
gi|306779123|ref|ZP_07417460.1| hypothetical protein TMBG_03512 [Mycobacterium tuberculosis
SUMu002]
gi|306787278|ref|ZP_07425600.1| hypothetical protein TMDG_02478 [Mycobacterium tuberculosis
SUMu004]
gi|306795876|ref|ZP_07434178.1| hypothetical protein TMFG_04002 [Mycobacterium tuberculosis
SUMu006]
gi|306801877|ref|ZP_07438545.1| hypothetical protein TMHG_03291 [Mycobacterium tuberculosis
SUMu008]
gi|306966285|ref|ZP_07478946.1| hypothetical protein TMIG_01171 [Mycobacterium tuberculosis
SUMu009]
gi|306970483|ref|ZP_07483144.1| hypothetical protein TMJG_02018 [Mycobacterium tuberculosis
SUMu010]
gi|307078208|ref|ZP_07487378.1| hypothetical protein TMKG_02608 [Mycobacterium tuberculosis
SUMu011]
gi|307082761|ref|ZP_07491874.1| putative ATPase, AAA family [Mycobacterium tuberculosis SUMu012]
gi|308370363|ref|ZP_07421231.2| hypothetical protein TMCG_02964 [Mycobacterium tuberculosis
SUMu003]
gi|308372853|ref|ZP_07430134.2| hypothetical protein TMEG_02856 [Mycobacterium tuberculosis
SUMu005]
gi|313657072|ref|ZP_07813952.1| hypothetical protein MtubKV_01546 [Mycobacterium tuberculosis KZN
V2475]
gi|383306210|ref|YP_005359021.1| hypothetical protein MRGA327_01815 [Mycobacterium tuberculosis
RGTB327]
gi|385989796|ref|YP_005908094.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385993387|ref|YP_005911685.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|422811206|ref|ZP_16859610.1| hypothetical protein TMMG_03958 [Mycobacterium tuberculosis
CDC1551A]
gi|424946069|ref|ZP_18361765.1| hypothetical protein NCGM2209_0677 [Mycobacterium tuberculosis
NCGM2209]
gi|308217025|gb|EFO76424.1| hypothetical protein TMAG_03651 [Mycobacterium tuberculosis
SUMu001]
gi|308327900|gb|EFP16751.1| hypothetical protein TMBG_03512 [Mycobacterium tuberculosis
SUMu002]
gi|308332257|gb|EFP21108.1| hypothetical protein TMCG_02964 [Mycobacterium tuberculosis
SUMu003]
gi|308336025|gb|EFP24876.1| hypothetical protein TMDG_02478 [Mycobacterium tuberculosis
SUMu004]
gi|308339629|gb|EFP28480.1| hypothetical protein TMEG_02856 [Mycobacterium tuberculosis
SUMu005]
gi|308343640|gb|EFP32491.1| hypothetical protein TMFG_04002 [Mycobacterium tuberculosis
SUMu006]
gi|308351355|gb|EFP40206.1| hypothetical protein TMHG_03291 [Mycobacterium tuberculosis
SUMu008]
gi|308355987|gb|EFP44838.1| hypothetical protein TMIG_01171 [Mycobacterium tuberculosis
SUMu009]
gi|308359933|gb|EFP48784.1| hypothetical protein TMJG_02018 [Mycobacterium tuberculosis
SUMu010]
gi|308363843|gb|EFP52694.1| hypothetical protein TMKG_02608 [Mycobacterium tuberculosis
SUMu011]
gi|308367513|gb|EFP56364.1| putative ATPase, AAA family [Mycobacterium tuberculosis SUMu012]
gi|323721318|gb|EGB30372.1| hypothetical protein TMMG_03958 [Mycobacterium tuberculosis
CDC1551A]
gi|339293341|gb|AEJ45452.1| hypothetical protein CCDC5079_0262 [Mycobacterium tuberculosis
CCDC5079]
gi|339296989|gb|AEJ49099.1| hypothetical protein CCDC5180_0262 [Mycobacterium tuberculosis
CCDC5180]
gi|358230584|dbj|GAA44076.1| hypothetical protein NCGM2209_0677 [Mycobacterium tuberculosis
NCGM2209]
gi|379026400|dbj|BAL64133.1| hypothetical protein ERDMAN_0316 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380720163|gb|AFE15272.1| hypothetical protein MRGA327_01815 [Mycobacterium tuberculosis
RGTB327]
Length = 620
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 314 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 372
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 373 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 432
Query: 309 ITCL 312
+ L
Sbjct: 433 VLFL 436
>gi|376403737|ref|YP_005090098.1| cbbx gene product (chloroplast) [Fucus vesiculosus]
gi|269991300|emb|CAX12483.1| cfxQ protein homolog [Fucus vesiculosus]
Length = 301
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 68/109 (62%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ + +D L EL VGL +K ++++ + +++D+ R+ LG VG P HM+F G
Sbjct: 25 TQIQKVIDILNQEL---VGLKPVKKRIQEISALLVIDKLRQNLGFTVG--NPGLHMSFTG 79
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+PGTGKT VA +G +LY +G + V R DLVG+++GHT PKT+
Sbjct: 80 SPGTGKTTVATRMGDILYKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTK 128
>gi|319783969|ref|YP_004143445.1| CbbX protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169857|gb|ADV13395.1| CbbX protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 312
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFL 249
S MD+L+ EL VGL +K ++R+ A +L+D R+ GL GA P HM F
Sbjct: 24 ASNIDEVMDKLDREL---VGLKPVKTRIREIAALLLVDRLRRRFGLTSGA--PTLHMNFT 78
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + +L+ +G + + V R DLVG++VGHT PKTR
Sbjct: 79 GNPGTGKTTVALRMAEILHRLGYVREGHMVAVTRDDLVGQYVGHTAPKTR 128
>gi|448927782|gb|AGE51355.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus CVG-1]
Length = 292
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LL
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLL----THGA 55
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 56 HIDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D + L+E+ AD SAKD++G TPL
Sbjct: 111 --ASDGDVARMLIEHGADISAKDSDGCTPL 138
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 30/146 (20%)
Query: 50 TPLHVSAGYNKAEIVK--------------SLLEWPGNDKV---------ELEAQNMYGE 86
TPLH+++ + A ++ + L W GN+ + ++ A++ +G
Sbjct: 106 TPLHIASDGDVARMLIEHGADISAKDSDGCTPLYWAGNECIARLLTAHGSDVSAKDRHGY 165
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH A + G A++LL H + A+ +G TPLH++ S R Y V+ LLE+ A
Sbjct: 166 TPLHHA-RTG--NIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRVLLEHGA 218
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLR 172
D AKDN G+ P +H S LR
Sbjct: 219 DIRAKDNNGRMPFEHWDQKQRSQFLR 244
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS---IR 131
+ ++ A++ Y TPLH A KN + ++LL HGA I+A +G TPLHL V S +
Sbjct: 24 EADVTAEDPYAHTPLHFA-KNA--DIIRVLLTHGAHIDATNIHGYTPLHLVVRASCPQLH 80
Query: 132 SEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRE 173
V+ LL + A+ +AK N G TPL S+G + L E
Sbjct: 81 ITHIDLVRLLLHHGANVNAKTNWGWTPLHIASDGDVARMLIE 122
>gi|374581413|ref|ZP_09654507.1| AAA+ family ATPase [Desulfosporosinus youngiae DSM 17734]
gi|374417495|gb|EHQ89930.1| AAA+ family ATPase [Desulfosporosinus youngiae DSM 17734]
Length = 333
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ EL + +GL +K +R + + +RR L + HM F GNPGTGKT V
Sbjct: 68 EILAELESYIGLVIVKRLIRDLQAFVEIQKRRTQEKL-IAEPLVLHMIFKGNPGTGKTTV 126
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
AR++GRL +G+L + E +R DLVGE++GHT KTR ++
Sbjct: 127 ARLVGRLFKEMGVLQKGHIIECERADLVGEYIGHTAQKTRDQI 169
>gi|340625320|ref|YP_004743772.1| hypothetical protein MCAN_02911 [Mycobacterium canettii CIPT
140010059]
gi|433625388|ref|YP_007259017.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140060008]
gi|340003510|emb|CCC42631.1| conserved hypothetical protein [Mycobacterium canettii CIPT
140010059]
gi|432152994|emb|CCK50205.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140060008]
Length = 631
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|337747175|ref|YP_004641337.1| protein SpoVK [Paenibacillus mucilaginosus KNP414]
gi|336298364|gb|AEI41467.1| SpoVK [Paenibacillus mucilaginosus KNP414]
Length = 331
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ + E+ EL +VGL +K + + + + R GL + HM F GNPGT
Sbjct: 49 QGQFGEIMKELDKMVGLDHVKELVFEIYALLRVASMRAEAGLTANTQ-VYHMVFRGNPGT 107
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VAR++ +L+ +G+L + EV+R DLVGE++GHT KTR V
Sbjct: 108 GKTTVARLIAKLMQTMGVLTKGHLIEVERADLVGEYIGHTALKTRELV 155
>gi|294995040|ref|ZP_06800731.1| hypothetical protein Mtub2_11145 [Mycobacterium tuberculosis 210]
Length = 631
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|123425100|ref|XP_001306730.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121888320|gb|EAX93800.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 647
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A YNK E + L+ N ++ ++ G+T LH AA N E A+LL++HG
Sbjct: 323 KTSLHYAAQYNKKETAEVLISHGAN----VDEKDNNGQTALHAAALNNSLETAELLISHG 378
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + K NNG T LH + Y+ + T + L+ + A+ + KDN G+T H + S
Sbjct: 379 ANVNEKDNNGQTSLHAAAQYNKKE----TAEVLISHGANINEKDNNGQTAF-HYAARNNS 433
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 434 KETAELLISH 443
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N D + + + A +H A + L + L+ ++ NE++ QT LH +A YNK E
Sbjct: 347 NVDEKDNNGQTA-LHAAALNNSLETAELLISHGANV-NEKDN-NGQTSLHAAAQYNKKET 403
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ N + ++ G+T H AA+N E A+LL++HGA K + G T LH
Sbjct: 404 AEVLISHGAN----INEKDNNGQTAFHYAARNNSKETAELLISHGANFNEKDDYGATALH 459
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ + + T + L+ + + KDN+GKT L H + S + ELL+ H
Sbjct: 460 YAAMKNSKE----TAELLISHGVNVDEKDNDGKTSL-HYAAINDSLEAAELLILH 509
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 25 DLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMY 84
D L LL + + +NE++ QT LH +A YNK E + L+ N + ++
Sbjct: 36 DSLETAELLISHGANVNEKDN-NGQTSLHAAAQYNKKETAEVLISHGAN----INEKDNN 90
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G+T H AA+N E A+LL++HGA K + G T LH + + + T + L+ +
Sbjct: 91 GQTAFHYAARNNSKETAELLISHGANFNEKDDYGATALHYAAMKNSKE----TAELLISH 146
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ KDN+GKT L H + S + ELL+ H
Sbjct: 147 GVNVDEKDNDGKTSL-HYAAINDSLEAAELLILH 179
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + NE++ A T LH +A N E + L+ V ++ ++ G+T LH
Sbjct: 108 ELLISHGANFNEKDDYGA-TALHYAAMKNSKETAELLISHG----VNVDEKDNDGKTSLH 162
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA N EAA+LL+ HG ++ K NNG T LH + Y+ + T + L+ + A+
Sbjct: 163 YAAINDSLEAAELLILHGTNVDEKDNNGQTSLHAAAQYNKKE----TAEVLISHGANVDE 218
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN G+T L H + S + ELL+ H
Sbjct: 219 KDNNGQTAL-HAAALNNSLETAELLISH 245
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + NE++ A T LH +A N E + L+ V ++ ++ G+T LH
Sbjct: 438 ELLISHGANFNEKDDYGA-TALHYAAMKNSKETAELLISHG----VNVDEKDNDGKTSLH 492
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA N EAA+LL+ HG ++ K NNG T LH + Y+ + T + L+ + A+
Sbjct: 493 YAAINDSLEAAELLILHGTNVDEKDNNGQTSLHAAAQYNKKE----TAEVLISHGANVDE 548
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN G+T L H + S + ELL+ H
Sbjct: 549 KDNNGQTAL-HAAALNNSLETAELLISH 575
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N D + + + A +H A + L + L+ ++ NE++ QT LH +A + E
Sbjct: 215 NVDEKDNNGQTA-LHAAALNNSLETAELLISHGVNI-NEKDN-DEQTSLHYAAINDSLEA 271
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ N + ++ G T LH+A E A+LL++HGA I+ K N+G T LH
Sbjct: 272 AELLISHGAN----INEKDNDGHTSLHVAEMKNSKETAELLISHGANIDEKDNDGKTSLH 327
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ Y+ + T + L+ + A+ KDN G+T L H + S + ELL+ H
Sbjct: 328 YAAQYNKKE----TAEVLISHGANVDEKDNNGQTAL-HAAALNNSLETAELLISH 377
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V ++ ++ G+T L++ A N E A+LL++HGA + K NNG T LH + Y+ +
Sbjct: 16 VNVDEKDNDGKTSLYVTAINDSLETAELLISHGANVNEKDNNGQTSLHAAAQYNKKE--- 72
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
T + L+ + A+ + KDN G+T H + S + ELL+ H
Sbjct: 73 -TAEVLISHGANINEKDNNGQTAF-HYAARNNSKETAELLISH 113
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N D + + + ++H AQ + L+ ++ + N QT LH +A N E
Sbjct: 512 NVDEKDNNGQT-SLHAAAQYNKKETAEVLISHGANVDEKDNN--GQTALHAAALNNSLET 568
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ V + ++ +T LH AA N EAA+LL++HGA I K N+G T LH
Sbjct: 569 AELLISHG----VNINEKDNDEQTSLHYAAINDSLEAAELLISHGANINEKDNDGHTSLH 624
Query: 124 LS 125
++
Sbjct: 625 VA 626
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 99 EAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
E A+LL++HG ++ K N+G T L+++ ++ T + L+ + A+ + KDN G+T
Sbjct: 6 ETAELLISHGVNVDEKDNDGKTSLYVTAI----NDSLETAELLISHGANVNEKDNNGQTS 61
Query: 159 LDHLSNGPGSAKLRELLLWH 178
L H + + E+L+ H
Sbjct: 62 L-HAAAQYNKKETAEVLISH 80
>gi|11467655|ref|NP_050707.1| CbbX [Guillardia theta]
gi|5921728|sp|O78450.1|CFXQ_GUITH RecName: Full=Protein cfxQ homolog
gi|3602980|gb|AAC35641.1| unknown (chloroplast) [Guillardia theta]
Length = 293
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 11/120 (9%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
EE KR+ E +DEL+ +L VGL +K ++++ A +L+ RK LGL
Sbjct: 13 EEYEKRQIQEV-------LDELDRDL---VGLIPVKTRIKEIAALLLVHRLRKLLGL-TS 61
Query: 240 ARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
A HM+F G+PGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 62 ANPGLHMSFTGSPGTGKTTVALKMADILFRLGYVRKGHLITVTRDDLVGQYIGHTAPKTK 121
>gi|379721023|ref|YP_005313154.1| protein SpoVK [Paenibacillus mucilaginosus 3016]
gi|386723631|ref|YP_006189957.1| protein SpoVK [Paenibacillus mucilaginosus K02]
gi|378569695|gb|AFC30005.1| SpoVK [Paenibacillus mucilaginosus 3016]
gi|384090756|gb|AFH62192.1| protein SpoVK [Paenibacillus mucilaginosus K02]
Length = 331
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+ + E+ EL +VGL +K + + + + R GL + HM F GNPGT
Sbjct: 49 QGQFGEIMKELDKMVGLDHVKELVFEIYALLRVASMRAEAGLTANTQ-VYHMVFRGNPGT 107
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VAR++ +L+ +G+L + EV+R DLVGE++GHT KTR V
Sbjct: 108 GKTTVARLIAKLMQTMGVLTKGHLIEVERADLVGEYIGHTALKTRELV 155
>gi|123474497|ref|XP_001320431.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121903236|gb|EAY08208.1| hypothetical protein TVAG_308140 [Trichomonas vaginalis G3]
Length = 1166
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 8/138 (5%)
Query: 22 QSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQ 81
+ G++ A +L+ EN L +N TPL ++ Y E+V++L++ N + L+ +
Sbjct: 10 EEGNVEAVCKLISENKDFLESKNS-NGFTPLLLAVNYGNLELVRALVDLGANIQA-LDPE 67
Query: 82 NMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTL 141
GE LH+AAK C + K LL HG IE NNG TPLH++ Y +++ L
Sbjct: 68 T--GENSLHIAAKGDCRKIIKFLLTHGILIECTTNNGCTPLHIAANYG----SVGSIRKL 121
Query: 142 LEYNADCSAKDNEGKTPL 159
A+ +AK+ G TPL
Sbjct: 122 TRLGANINAKNVNGMTPL 139
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
+ EI+K LLE N K+ + +TPLH+AA G K L+ + A I+A N G
Sbjct: 236 RQEIIKVLLEEGVNPKI---TNQITKQTPLHVAAAVGVVSIIKQLIENEADIDAVDNEGN 292
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
TPLH++ ++ Y V L+ A ++N+GKT +D
Sbjct: 293 TPLHMAA----QNCQYQAVSELITRGA-IVKENNDGKTAID 328
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 27/183 (14%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V + ++ G T L A K G + ++L+ G+ N+G TPLH Y+ ++
Sbjct: 716 VSVSERDDAGTTVLITAVKAGDIDMIRVLVESGSITGVHDNDGRTPLH----YAALGDNV 771
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETK 195
V L+E N + KDN GKTPLD S +R+ +A + S +
Sbjct: 772 EIVDYLIE-NGATNKKDNNGKTPLDLCS------------------RRQSKAAKQISHSI 812
Query: 196 AKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTG 255
+ E E+ H+ K +K+ + +A+ PH+ +L N G
Sbjct: 813 RHLIEYFIEMDAAQNYHQFKEVFKKYRTKYGVHSAIRAISY----NSKPHVEYLINHGLK 868
Query: 256 KTM 258
T+
Sbjct: 869 PTV 871
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE-AAKLLLAHGAFIEAKANNGMT 120
EI K L++ N + AQ+ G TPLH+A K N+ LL+ HGA + N +T
Sbjct: 889 EIAKFLIDKGAN----VNAQSEGGYTPLHIACKYQNNDDIIHLLIEHGADVNLTTKNNIT 944
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD-----H--------LSNGPG 167
PL L +++ + + +LL AD + + PLD H +S G
Sbjct: 945 PLFL----AMKVGNTIAINSLLNKGADPNIRTETDLAPLDIAARRHNTEMIDILISKGAD 1000
Query: 168 SA-----KLRELLLWHSEEQ--RKRRALEAC 191
+++EL + E+Q +KRRAL A
Sbjct: 1001 EVSLEETRMQELSIKEVEKQKIKKRRALRAA 1031
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPL + NK EI K LL + + + +E+ G+TPLH+AA+ G + +LLL +
Sbjct: 415 KTPLICAVEQNKFEIAKQLLVYSADVNLTIEST---GQTPLHIAAEKGYFDILELLLQNN 471
Query: 109 AFIEAKAN 116
A + AN
Sbjct: 472 AMLVDDAN 479
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G T LH A + C E AK L+ GA + A++ G TPLH++ Y + + L+E+
Sbjct: 876 GMTLLHYAVPH-CFEIAKFLIDKGANVNAQSEGGYTPLHIACKYQNNDD---IIHLLIEH 931
Query: 145 NADCSAKDNEGKTPL 159
AD + TPL
Sbjct: 932 GADVNLTTKNNITPL 946
>gi|442804735|ref|YP_007372884.1| stage V sporulation protein K [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740585|gb|AGC68274.1| stage V sporulation protein K [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 618
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
T K +E+ E+ +VGL +K + + + + R+ GL G+ H AFLGNPG
Sbjct: 65 TPFKPEEIRAEIEKLVGLTNVKEDIEALMDFVKVQKLRREHGLS-GSSISLHTAFLGNPG 123
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
TGKT VAR++G +G+L + EV R DLV E+VG T KT + + + I +
Sbjct: 124 TGKTTVARLMGEYFKALGVLKKGHIVEVTRADLVAEYVGGTAVKTNKVIDKAIDGILFI 182
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
E+ K ++ + T K++ + EL VGL +K ++ + +++R+ LGL V
Sbjct: 330 EDIEKALRVKEITVTSDKLESILQELDEFVGLKNIKGHIKTLVNLIRTNQKREELGLPV- 388
Query: 240 ARRP--PHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
+P H F G+PGTGKT +ARILGR+ +GIL V EV R+ LV +VG T K
Sbjct: 389 --KPMSYHAIFCGSPGTGKTSIARILGRIYQSLGILKKGHVIEVDRSGLVAGYVGQTEEK 446
Query: 298 TRRRVGHLLSEITCL 312
T + + + I +
Sbjct: 447 TNKVLDQAMDGILFI 461
>gi|433462798|ref|ZP_20420370.1| stage V sporulation protein K [Halobacillus sp. BAB-2008]
gi|432188369|gb|ELK45569.1| stage V sporulation protein K [Halobacillus sp. BAB-2008]
Length = 752
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
+VGL ++K +R++ + +RRK+ G + HM GNPGTGKT +AR+L
Sbjct: 215 FDRMVGLKDVKTYIRRYYHFLKYQQRRKSFGFSMVDEPGLHMIITGNPGTGKTTMARLLA 274
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ + +GIL T V EV R+ LVG +VG + T V
Sbjct: 275 DIYHELGILETKEVVEVNRSHLVGSYVGQSEENTMNYV 312
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +++GLH +K ++RK + + ++RK G V + H F GNPGTGKT VA I
Sbjct: 493 LDSLIGLHNVKEEVRKLSSFVQAQQKRKEQGYPVVPIQL-HSVFSGNPGTGKTTVADIYA 551
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+L G+L + V R+DLV +VG T KT+R++
Sbjct: 552 GVLKECGLLKRGHMVVVSRSDLVAGYVGQTAIKTKRKI 589
>gi|15607423|ref|NP_214796.1| ESX conserved component EccA3. ESX-3 type VII secretion system
protein [Mycobacterium tuberculosis H37Rv]
gi|148660048|ref|YP_001281571.1| hypothetical protein MRA_0291 [Mycobacterium tuberculosis H37Ra]
gi|148821480|ref|YP_001286234.1| hypothetical protein TBFG_10289 [Mycobacterium tuberculosis F11]
gi|253797209|ref|YP_003030210.1| hypothetical protein TBMG_00287 [Mycobacterium tuberculosis KZN
1435]
gi|254230656|ref|ZP_04923983.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|289760393|ref|ZP_06519771.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|375294492|ref|YP_005098759.1| hypothetical protein TBSG_00291 [Mycobacterium tuberculosis KZN
4207]
gi|385997057|ref|YP_005915355.1| hypothetical protein MTCTRI2_0289 [Mycobacterium tuberculosis
CTRI-2]
gi|392385002|ref|YP_005306631.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|392430701|ref|YP_006471745.1| hypothetical protein TBXG_000288 [Mycobacterium tuberculosis KZN
605]
gi|397672073|ref|YP_006513608.1| ESX-3 secretion system protein EccA3 [Mycobacterium tuberculosis
H37Rv]
gi|7388389|sp|O53687.1|ECCA3_MYCTU RecName: Full=ESX-3 secretion system protein EccA3; AltName:
Full=ESX conserved component A3; AltName: Full=Type VII
secretion system protein EccA3; Short=T7SS protein EccA3
gi|124599715|gb|EAY58725.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148504200|gb|ABQ72009.1| hypothetical protein MRA_0291 [Mycobacterium tuberculosis H37Ra]
gi|148720007|gb|ABR04632.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|253318712|gb|ACT23315.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289707899|gb|EFD71915.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|328456997|gb|AEB02420.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
gi|344218103|gb|AEM98733.1| hypothetical protein MTCTRI2_0289 [Mycobacterium tuberculosis
CTRI-2]
gi|378543553|emb|CCE35824.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|392052110|gb|AFM47668.1| hypothetical protein TBXG_000288 [Mycobacterium tuberculosis KZN
605]
gi|395136978|gb|AFN48137.1| ESX-3 secretion system protein EccA3 [Mycobacterium tuberculosis
H37Rv]
gi|440579735|emb|CCG10138.1| ESX CONSERVED COMPONENT ECCA3 [Mycobacterium tuberculosis 7199-99]
gi|444893758|emb|CCP43012.1| ESX conserved component EccA3. ESX-3 type VII secretion system
protein [Mycobacterium tuberculosis H37Rv]
Length = 631
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|296138131|ref|YP_003645374.1| ATPase AAA [Tsukamurella paurometabola DSM 20162]
gi|296026265|gb|ADG77035.1| AAA ATPase central domain protein [Tsukamurella paurometabola DSM
20162]
Length = 558
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 209 VGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLY 268
VGL E+K Q+ + M L + R GL GAR H+AF G PGTGKT VARI+ R+
Sbjct: 288 VGLREVKEQVARLRTTMQLAQVRADRGLSSGAR-SLHLAFTGPPGTGKTTVARIVARMYR 346
Query: 269 MVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+G+L T+ V E R DLVG+++G T KT
Sbjct: 347 GLGLLQTENVVECSRRDLVGQYLGATAIKT 376
>gi|11465473|ref|NP_045136.1| CbbX [Cyanidium caldarium]
gi|14194486|sp|Q9TLY2.1|CFXQ1_CYACA RecName: Full=Protein cfxQ homolog
gi|6466376|gb|AAF12958.1|AF022186_81 unknown [Cyanidium caldarium]
Length = 301
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 189 EACSETKAK--MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-H 245
E ++TK + +D+L EL +GL +K ++R+ A +L+D R+ +GL + P H
Sbjct: 21 EEFNKTKIQEVLDDLNQEL---IGLKPVKNRIREIAALLLVDRLRQKVGL--SSSNPGLH 75
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
M+F G PGTGKT VA + +LY + + + V R DLVG+++GHT PKT+
Sbjct: 76 MSFTGPPGTGKTTVATKMADILYKLNYIKKGHLVTVTRDDLVGQYIGHTAPKTK 129
>gi|433633302|ref|YP_007266929.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140070017]
gi|432164895|emb|CCK62359.1| ESX conserved componant EccA3 [Mycobacterium canettii CIPT
140070017]
Length = 631
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|31791461|ref|NP_853954.1| hypothetical protein Mb0290 [Mycobacterium bovis AF2122/97]
gi|121636197|ref|YP_976420.1| hypothetical protein BCG_0322 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988670|ref|YP_002643357.1| hypothetical protein JTY_0292 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289441662|ref|ZP_06431406.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289445821|ref|ZP_06435565.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289568196|ref|ZP_06448423.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289572867|ref|ZP_06453094.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289748053|ref|ZP_06507431.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289748764|ref|ZP_06508142.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289752315|ref|ZP_06511693.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289756347|ref|ZP_06515725.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298523753|ref|ZP_07011162.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|339630357|ref|YP_004721999.1| hypothetical protein MAF_02840 [Mycobacterium africanum GM041182]
gi|378770030|ref|YP_005169763.1| putative ESX-3 secretion system protein [Mycobacterium bovis BCG
str. Mexico]
gi|424806761|ref|ZP_18232192.1| hypothetical protein TBPG_04015 [Mycobacterium tuberculosis W-148]
gi|31617047|emb|CAD93154.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491844|emb|CAL70307.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224771783|dbj|BAH24589.1| hypothetical protein JTY_0292 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289414581|gb|EFD11821.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289418779|gb|EFD15980.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289537298|gb|EFD41876.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289541949|gb|EFD45598.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289688581|gb|EFD56069.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289689351|gb|EFD56780.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289692902|gb|EFD60331.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289711911|gb|EFD75923.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298493547|gb|EFI28841.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|326906037|gb|EGE52970.1| hypothetical protein TBPG_04015 [Mycobacterium tuberculosis W-148]
gi|339329713|emb|CCC25356.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
gi|341600213|emb|CCC62883.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|356592351|gb|AET17580.1| Putative ESX-3 secretion system protein [Mycobacterium bovis BCG
str. Mexico]
Length = 631
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 325 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 383
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 384 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 443
Query: 309 ITCL 312
+ L
Sbjct: 444 VLFL 447
>gi|386003355|ref|YP_005921634.1| hypothetical protein MRGA423_01820 [Mycobacterium tuberculosis
RGTB423]
gi|380723843|gb|AFE11638.1| hypothetical protein MRGA423_01820 [Mycobacterium tuberculosis
RGTB423]
Length = 768
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A E KA + E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F
Sbjct: 314 AAHERKAALLHEAELQLAEFIGLDEVKRQVSRLKSSVAMELVRKQRGLTV-AQRTHHLVF 372
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT +AR++ ++ +G+L + + EV R DL+G+ +G T KT + L
Sbjct: 373 AGPPGTGKTTIARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDG 432
Query: 309 ITCL 312
+ L
Sbjct: 433 VLFL 436
>gi|345002671|ref|YP_004805525.1| AAA ATPase central domain-containing protein [Streptomyces sp.
SirexAA-E]
gi|344318297|gb|AEN12985.1| AAA ATPase central domain protein [Streptomyces sp. SirexAA-E]
Length = 1101
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
DEL EL ++GL +K ++ + ++RKA GL R H+ F G PGTGKT
Sbjct: 831 DELLAELHAMIGLTAVKNEVAALVNLLTAAKQRKAAGLPT-PRISNHLIFSGPPGTGKTT 889
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ LL +G+LP ++ EV R DLVG +VGHT T+
Sbjct: 890 VARLYADLLRSLGVLPKGQLVEVARADLVGRYVGHTAQLTK 930
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRL 266
++VGL E+K Q+R L++RR LG+ V + H+ F G PGTGKT VAR+ G +
Sbjct: 562 SLVGLTEVKSQVRTLVNLNQLNQRRAQLGMPV-PQMSRHLVFSGPPGTGKTTVARLYGGI 620
Query: 267 LYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
L +G+L + + EV R DLV + +G T KT
Sbjct: 621 LADLGVLRSGHLVEVSRADLVAQVIGGTAIKT 652
>gi|386388221|ref|ZP_10073132.1| hypothetical protein STSU_32295 [Streptomyces tsukubaensis
NRRL18488]
gi|385664305|gb|EIF88137.1| hypothetical protein STSU_32295 [Streptomyces tsukubaensis
NRRL18488]
Length = 1100
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/112 (41%), Positives = 66/112 (58%), Gaps = 6/112 (5%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D LE EL ++GL +K Q+R L +RRK+LG+ V + H+ F G PGTGKT
Sbjct: 555 DPLE-ELEALIGLDGVKHQVRTLVNLNQLAQRRKSLGMPVPSMSR-HLVFAGPPGTGKTT 612
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT----RRRVGHLL 306
VAR+ G +L +G+LP + EV R DLV + +G T KT +R +G +L
Sbjct: 613 VARLYGSVLARLGVLPEGHLVEVSRADLVAQVIGGTAIKTTEAFKRAIGGVL 664
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L +VGL +K ++ + E+R A GL V R H+ F G+PGTGKT VAR+
Sbjct: 835 KLDGMVGLRAVKREVTDLVSLLATAEQRAAAGLPV-HRVSRHLVFSGSPGTGKTTVARLY 893
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LL +G+L ++ EV R DLVG +VGHT T+
Sbjct: 894 AGLLASLGVLSRGQLVEVARADLVGRYVGHTAQLTK 929
>gi|449019764|dbj|BAM83166.1| presumed transcriptional regulator for RuBisCO operon
[Cyanidioschyzon merolae strain 10D]
Length = 401
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+D L+ ++VGL +K ++R+ A +++D+ R LGL G HMAF G+PGTGKT
Sbjct: 116 LDILQKLDHDLVGLKPVKDRVREIAALLVVDKLRSRLGL-TGTTPSLHMAFTGSPGTGKT 174
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA +G++L +G + + R DLVG++VGHT PKT+
Sbjct: 175 TVAMRMGQILKAMGYSRSGHLIVATRDDLVGQYVGHTAPKTK 216
>gi|440703424|ref|ZP_20884362.1| ATPase, AAA family [Streptomyces turgidiscabies Car8]
gi|440275134|gb|ELP63594.1| ATPase, AAA family [Streptomyces turgidiscabies Car8]
Length = 836
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 575 GELDALVGLESVKREVRALTDMIEVGRRRQQAGLKAASARR-HLVFTGSPGTGKTTVARL 633
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 634 YGEILAALGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 670
>gi|118411164|ref|YP_874558.1| Rubisco expression protein [Thalassiosira pseudonana]
gi|224015756|ref|XP_002297526.1| rubisco expression protein, plastid protein [Thalassiosira
pseudonana CCMP1335]
gi|116739911|gb|ABK20781.1| Rubisco expression protein [Thalassiosira pseudonana]
gi|220967790|gb|EED86166.1| rubisco expression protein, plastid protein [Thalassiosira
pseudonana CCMP1335]
Length = 287
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K ++R+ A +L+D+ RK LG+ + P HM+F G+PGTGKT V +
Sbjct: 26 LVGLAPVKARIREIAALLLIDKLRKNLGISTNS---PGLHMSFTGSPGTGKTTVGLKMAD 82
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 83 ILFQLGYVAKGHLLTVTRDDLVGQYIGHTAPKTK 116
>gi|110590885|pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
gi|110590886|pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
gi|28274850|gb|AAO25690.1| ankyrin repeat protein E3_19, partial [synthetic construct]
Length = 166
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A EIV+ LL+ + ++ A + G TPLH
Sbjct: 31 RILMANGADVNAED-TYGDTPLHLAARVGHLEIVEVLLK----NGADVNALDFSGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AAK G E ++LL +GA + A G TPLHL+ + V+ LL+Y AD +A
Sbjct: 86 LAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAA----DTGHLEIVEVLLKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A++ YG+TPLH+AA+ G E ++LL +GA + A +G TPLHL+ +
Sbjct: 39 DVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAA----KRGHLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
V+ LL+Y AD +A D G TPL HL+ G ++ E+LL + +
Sbjct: 95 IVEVLLKYGADVNADDTIGSTPL-HLAADTGHLEIVEVLLKYGAD 138
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L + LL+ N + +N + TPLH++A EIV+ LL++
Sbjct: 51 LHLAARVGHLEIVEVLLK-NGADVNALD-FSGSTPLHLAAKRGHLEIVEVLLKY----GA 104
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
++ A + G TPLH+AA G E ++LL +GA + A+ G T +S+
Sbjct: 105 DVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFDISI 154
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A+ G TPLHL+ R V+ LL+ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAA----RVGHLEIVEVLLKNGADVNAL 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL + +
Sbjct: 77 DFSGSTPL-HLAAKRGHLEIVEVLLKYGAD 105
>gi|154414984|ref|XP_001580518.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121914736|gb|EAY19532.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 707
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T L ++A N E +K L+ N + +N YGET LH AAK E A+LL++HG
Sbjct: 301 ETILLIAAENNCKETIKLLISHGAN----INEKNKYGETALHFAAKYNSKETAELLISHG 356
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK NNG T L + Y E T + L+ + A+ + KDN+G+T L +
Sbjct: 357 ANINAKDNNGKTVLQYTTNYDNSKE---TTELLISHGANINEKDNDGQTALHFAACNNSR 413
Query: 169 AKLRELLLWH 178
++ ELL+ H
Sbjct: 414 KEMAELLILH 423
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL + + +NE+N QT LH +A + E V+ LL + N + ++ G+T LH
Sbjct: 518 KLLISHGANINEKNK-NGQTALHAAAFCKRKETVELLLSYGAN----INEKDKNGQTALH 572
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+N E A+LL++HGA I K N+G T LH++ + + + LL + A+ +
Sbjct: 573 YAAENNSKETAELLISHGANINEKDNDGQTALHIATFCKHKE----NAEFLLSHGANINE 628
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KD G+T L H + S + ELLL H
Sbjct: 629 KDKNGQTAL-HYAAENNSKETAELLLSH 655
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGY--NKAEIVKSLLEWPGNDKVELEAQNMYGETPL 89
LL + + +NE+N +T LH SA Y N E V+ L+ + + ++ GET L
Sbjct: 452 LLISHGANINEKNN-QEKTALH-SATYCRNNKEAVELLISHG----ININEKDKNGETAL 505
Query: 90 HMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCS 149
H AA N E KLL++HGA I K NG T LH + + R E TV+ LL Y A+ +
Sbjct: 506 HYAAWNNRKEIVKLLISHGANINEKNKNGQTALH-AAAFCKRKE---TVELLLSYGANIN 561
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KD G+T L H + S + ELL+ H
Sbjct: 562 EKDKNGQTAL-HYAAENNSKETAELLISH 589
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QT LH +A N + + LL G + + ++ GET LH AA+N E A+LL++HG
Sbjct: 401 QTALHFAACNNSRKEMAELLILHG---ININEKDKNGETALHRAAENNNKETAELLISHG 457
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K N T LH + + E V+ L+ + + + KD G+T L H +
Sbjct: 458 ANINEKNNQEKTALHSATYCRNNKE---AVELLISHGININEKDKNGETAL-HYAAWNNR 513
Query: 169 AKLRELLLWH 178
++ +LL+ H
Sbjct: 514 KEIVKLLISH 523
>gi|56963918|ref|YP_175649.1| stage V sporulation protein K [Bacillus clausii KSM-K16]
gi|56910161|dbj|BAD64688.1| stage V sporulation protein K [Bacillus clausii KSM-K16]
Length = 739
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAF 248
S T + ++ + L ++GL E+K +++K + E R+ +GL V PP H F
Sbjct: 464 STTPQRAEDALSRLDALIGLEEVKREVKKLTAYAKVKEARRDMGLAV----PPMPLHTVF 519
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
G PGTGKT VAR+ L +G+L V EV R+DLV FVG T KT R + L
Sbjct: 520 SGAPGTGKTTVARLYAEALNQIGLLKKGHVVEVSRSDLVSGFVGQTALKTERVIEDALGG 579
Query: 309 ITCL 312
+ +
Sbjct: 580 VLFI 583
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +VGL ++K ++ K + + RK GL+ +M GNPGTGKT +AR+L
Sbjct: 203 ELDEMVGLADVKARIHKLYLFLKYQQERKKRGLQTKQLLNLNMIMTGNPGTGKTTLARLL 262
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
++ Y +GIL V EV R LV +VG T +T
Sbjct: 263 AKIYYELGILSKPEVYEVDRAQLVAGYVGQTEEQT 297
>gi|356624520|pdb|3SYK|A Chain A, Crystal Structure Of The Aaa+ Protein Cbbx,
Selenomethionine Structure
gi|356624521|pdb|3SYK|B Chain B, Crystal Structure Of The Aaa+ Protein Cbbx,
Selenomethionine Structure
Length = 309
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA S K ++EL+ EL +GL +K ++R+ A +L++ R+ LGL A P
Sbjct: 14 RAEYEGSGAKEVLEELDREL---IGLKPVKDRIRETAALLLVERARQKLGL---AHETPT 67
Query: 245 -HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
H +F GNPGTGKT VA LL+ +G + + V R DLVG+++GHT PKT+
Sbjct: 68 LHXSFTGNPGTGKTTVALKXAGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTK 123
>gi|154495818|ref|ZP_02034514.1| hypothetical protein BACCAP_00097 [Bacteroides capillosus ATCC
29799]
gi|150275016|gb|EDN02064.1| ATPase, AAA family [Pseudoflavonifractor capillosus ATCC 29799]
Length = 512
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 7/121 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAF 248
+E ++EL +EL ++ GL ++K ++ + + + R+ GL V PP H+ F
Sbjct: 206 AEPAPSLEELLSELDSLCGLEKVKKDVKSLINLVKVRKMRQEHGLPV----PPMSLHLVF 261
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSE 308
+GNPGTGKT VAR+L ++ + +G+L ++ EV R+ LV FVG T KT + L
Sbjct: 262 MGNPGTGKTTVARLLAKIYHAIGVLSKGQLVEVDRSGLVAGFVGQTAIKTNEVIQKALGG 321
Query: 309 I 309
+
Sbjct: 322 V 322
>gi|411001517|ref|ZP_11377846.1| ATPase [Streptomyces globisporus C-1027]
Length = 638
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 5/129 (3%)
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RK A + E +L +VG+ +K Q++ + + + R GL V +
Sbjct: 331 RKPPPFPAGPSDPVLLAEALAQLERMVGMEPVKRQVKALSAQLNMARLRAEQGLPV---Q 387
Query: 243 PP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
PP H F G GTGKT VARILGR+ Y +G+L D + E QR+DLVGEF+G T K
Sbjct: 388 PPKRHFVFSGPSGTGKTTVARILGRVFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANE 447
Query: 301 RVGHLLSEI 309
+ L +
Sbjct: 448 LIDSALGGV 456
>gi|422861516|ref|ZP_16908156.1| hypothetical protein HMPREF9386_1712 [Streptococcus sanguinis
SK330]
gi|327468384|gb|EGF13869.1| hypothetical protein HMPREF9386_1712 [Streptococcus sanguinis
SK330]
Length = 636
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 11/140 (7%)
Query: 161 HLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRK 220
+LSNG S L L ++ C+ A + EL +VGL +K + +
Sbjct: 322 NLSNGKQSFSLPSDLF----------CMKGCNNPLATNSDALKELDRLVGLSTVKNLIHR 371
Query: 221 WAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTE 280
+ +RR + + R H F G GTGKT+VAR+L ++ Y GI+ ++ + E
Sbjct: 372 ILAYFSISQRRHEINSSL-VRPSMHFMFSGASGTGKTIVARLLTKIFYEHGIIKSNVLIE 430
Query: 281 VQRTDLVGEFVGHTGPKTRR 300
V R+DL+GE+VG T PK +R
Sbjct: 431 VGRSDLIGEYVGQTAPKVKR 450
>gi|323447807|gb|EGB03716.1| hypothetical protein AURANDRAFT_72668 [Aureococcus anophagefferens]
Length = 512
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 9/115 (7%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKAL------GLKVGARR--PP 244
E + D LE L ++VGL LK ++R + ++++++R+ + G K A R P
Sbjct: 106 EAPSSEDPLERALDSLVGLEPLKEEIRALRRTLVVEQQRRNVLNLGGDGKKRKAARVSAP 165
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM F G+PGTGKT AR++ +LL +G + D + EVQR DLV +VG T KTR
Sbjct: 166 HMVFRGSPGTGKTHAARLISQLLKELGYVHGD-IVEVQRADLVAGYVGQTALKTR 219
>gi|123501956|ref|XP_001328186.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121911126|gb|EAY15963.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 499
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 86/152 (56%), Gaps = 14/152 (9%)
Query: 29 FQRLLRENPSLLN--ERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGE 86
F LL N + +N ++N V T LH+S+ N ++ K L+ V++ A+++YG+
Sbjct: 268 FADLLISNGAEINASDKNGV---TALHISSIRNSVQVGKLLIM----SNVDINAKDIYGQ 320
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
+H+AA + C E KLL++HGA + +K+N+G LH + S S D + L+ + +
Sbjct: 321 NAIHLAAIHNCKEIIKLLISHGADLSSKSNSGKIALHFAA--SNNSVD--VIDDLIMHGS 376
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
D ++KDN GKT L H + S +L E L+ H
Sbjct: 377 DINSKDNYGKTAL-HEAAINSSKELAECLILH 407
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 9/137 (6%)
Query: 42 ERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAA 101
+ N +TPLH + +N +++K L+ +KV++ A++ G + LH+AA + A
Sbjct: 214 QDNDSDGRTPLHYATEHNSIDVLKVLIS----NKVDINAKDKNGYSALHIAADCNYRDFA 269
Query: 102 KLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
LL+++GA I A NG+T LH+S SIR+ K L+ N D +AKD G+ + H
Sbjct: 270 DLLISNGAEINASDKNGVTALHIS---SIRNS-VQVGKLLIMSNVDINAKDIYGQNAI-H 324
Query: 162 LSNGPGSAKLRELLLWH 178
L+ ++ +LL+ H
Sbjct: 325 LAAIHNCKEIIKLLISH 341
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N+ EI + L+ G+D V ++ + G TPLH A ++ + K+L+++
Sbjct: 187 TALHIAARMNRKEIAEILIA-HGSD-VNIQDNDSDGRTPLHYATEHNSIDVLKVLISNKV 244
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK NG + LH++ + R D+A + L+ A+ +A D G T L H+S+ S
Sbjct: 245 DINAKDKNGYSALHIAADCNYR--DFADL--LISNGAEINASDKNGVTAL-HISSIRNSV 299
Query: 170 KLRELLL 176
++ +LL+
Sbjct: 300 QVGKLLI 306
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH + YN E+ K + G+ + + ++ G + LH N E ++L+++GA
Sbjct: 121 TLLHYATAYNNVELCK---RFSGSQDL-INERDDKGRSALHFGVINNNKEIVEILISNGA 176
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDN--EGKTPLDHLSNGPG 167
I AK N G T LH++ R + L+ + +D + +DN +G+TPL H +
Sbjct: 177 DINAKDNEGATALHIAA----RMNRKEIAEILIAHGSDVNIQDNDSDGRTPL-HYATEHN 231
Query: 168 SAKLRELLL 176
S + ++L+
Sbjct: 232 SIDVLKVLI 240
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A IH C + + L+ L ++ N + LH +A N +++ L+ G+D
Sbjct: 326 AAIHNCKE-----IIKLLISHGADLSSKSNS--GKIALHFAASNNSVDVIDDLI-MHGSD 377
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
+ +++ YG+T LH AA N E A+ L+ HG I N G T L+ ++
Sbjct: 378 ---INSKDNYGKTALHEAAINSSKELAECLILHGIKINTADNEGYTALYYAL 426
>gi|407642116|ref|YP_006805875.1| hypothetical protein O3I_004690 [Nocardia brasiliensis ATCC 700358]
gi|407305000|gb|AFT98900.1| hypothetical protein O3I_004690 [Nocardia brasiliensis ATCC 700358]
Length = 611
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 4/125 (3%)
Query: 177 WHSEEQRKRRALE-ACSETKAK--MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKA 233
W +A+E A +E +AK + EL + +GL +K Q+ K + + R
Sbjct: 287 WDPNSAPSMKAMEQAETEDRAKKILAAARAELDSQIGLSSVKTQVAKLQSSAQMAKIRAE 346
Query: 234 LGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGH 293
GL GAR H+AF G PGTGKT +AR++ ++ VGIL TD+V E +R D V + +G
Sbjct: 347 KGLAAGAR-GQHLAFTGPPGTGKTTIARVVAKIYCGVGILKTDKVVEAKRVDFVAQHLGG 405
Query: 294 TGPKT 298
T K+
Sbjct: 406 TAVKS 410
>gi|373955859|ref|ZP_09615819.1| AAA ATPase central domain protein [Mucilaginibacter paludis DSM
18603]
gi|373892459|gb|EHQ28356.1| AAA ATPase central domain protein [Mucilaginibacter paludis DSM
18603]
Length = 1124
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL+ ++GL +K ++ + +++ R A G G H F G PGTGKT VARIL
Sbjct: 860 ELNQLIGLRAVKDEIGGLISFLEIEKMRAASGQTGGTTLNLHFIFKGKPGTGKTTVARIL 919
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
++ +G+LP ++ E R DLVG++VGHT +T
Sbjct: 920 AKVFKALGVLPVGQLIETDRKDLVGQYVGHTAKQT 954
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/108 (36%), Positives = 64/108 (59%), Gaps = 7/108 (6%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGT 254
+DE+ + L+ + GL +K ++ + L E+ +A + G+++ H F GNPGT
Sbjct: 577 IDEVLSALNKLTGLAGVKSEIAEMVD-FLQGEKLRA---EAGSKKMTISLHFVFAGNPGT 632
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GKT VARIL ++ +GILP+D++ EV DLV +VG T +T + +
Sbjct: 633 GKTTVARILAKIFKGLGILPSDKLVEVTDKDLVSGYVGQTSAQTNKVI 680
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLK---VGARRPPHMAFLGNPGTGK 256
E+ +L + VG+ +K +R + L ++ + K +GA H+ GNPGTGK
Sbjct: 305 EVLADLDDFVGMDNVKTFIRNLVNLVSLQQKDATITGKTDVIGA----HIILTGNPGTGK 360
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
T +A+ LG + GIL + V E+ R+ LVG++VG T
Sbjct: 361 TTLAKKLGEIFAASGILSSGHVVEMDRSKLVGQYVGET 398
>gi|407476980|ref|YP_006790857.1| ATPase central domain-containing protein [Exiguobacterium
antarcticum B7]
gi|407061059|gb|AFS70249.1| ATPase central domain-containing protein [Exiguobacterium
antarcticum B7]
Length = 732
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL ++K+++ + + + ++R A G + + HM F+GNPGTGKT +AR++
Sbjct: 209 ELDAMIGLEDIKLRVHQMYRFLKYQQKRTADGYRSSDQPSLHMIFMGNPGTGKTTLARLM 268
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG----PKTRRRVGHLL 306
++ + +G+L V E R+ LVG FVG T K R VG +L
Sbjct: 269 AKIYHELGLLERPEVVETDRSSLVGAFVGQTEEQVMSKVREAVGGVL 315
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTM 258
+E L +VGLH LK ++++ + + +RR+ G KV P H F GN GTGKT
Sbjct: 479 VEERLERLVGLHPLKAEIKQIQALLSMQKRRQEAGFKV---LPVELHTVFSGNSGTGKTT 535
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + +L G L + V R DLV +VG T +TR
Sbjct: 536 VAALYADVLRQCGYLKRGHLKVVSRADLVSGYVGQTAQQTR 576
>gi|441161651|ref|ZP_20967991.1| ATPase AAA, partial [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440616711|gb|ELQ79840.1| ATPase AAA, partial [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 366
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
DE+ EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 101 DEVLGELDRLVGLESVKREVRSLINMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTT 159
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L + +L + EV R DLVGE +G T +T+
Sbjct: 160 VARLYGEILASLDVLERGHLVEVSRVDLVGEHIGSTAIRTQ 200
>gi|453382684|dbj|GAC82763.1| putative ATPase [Gordonia paraffinivorans NBRC 108238]
Length = 594
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL+ +GL +K Q+ K +L R GL AR H+AF G PGTGKT V
Sbjct: 304 EAQRELAEQIGLESVKQQVAKLQSAAMLARVRADRGLSTTAR-SLHLAFTGPPGTGKTTV 362
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI+ ++ +G + TD+V E R D+VGE +G T KT
Sbjct: 363 ARIVAKIYCGLGFIKTDKVVEASRRDMVGEHLGSTAIKT 401
>gi|345013235|ref|YP_004815589.1| ATPase AAA [Streptomyces violaceusniger Tu 4113]
gi|344039584|gb|AEM85309.1| AAA ATPase central domain protein [Streptomyces violaceusniger Tu
4113]
Length = 812
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 551 GELDTLVGLESVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTTVARL 609
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 610 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 646
>gi|283794869|ref|YP_003359222.1| CbbX [Cryptomonas paramecium]
gi|253981841|gb|ACT46758.1| CbbX [Cryptomonas paramecium]
Length = 289
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 11/120 (9%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
EE +RR E D+L++EL VGL +K +L++ A +++ R LGL
Sbjct: 17 EEYEERRLQEV-------FDDLDSEL---VGLLPIKNRLKEIAALLIVHRLRAHLGLSF- 65
Query: 240 ARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ HM+F GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 66 SNPGLHMSFTGNPGTGKTTVALKMADILFRLGYIRNGHLVTVTRDDLVGQYIGHTAPKTK 125
>gi|123437955|ref|XP_001309767.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121891508|gb|EAX96837.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 948
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 86/157 (54%), Gaps = 10/157 (6%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
CA + +L N + +N +N TPLH +A YN E + L+ + ++
Sbjct: 421 CAARYNSKETAEILISNGADINAKNE-DGSTPLHYAARYNSKETAEILIS----NGADIN 475
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A+N G TPLH AA++ E A++L+++GA I AK + G TPLH + Y +S++ A +
Sbjct: 476 AKNEDGSTPLHYAARDNSKEIAEILISNGADINAKEHGGWTPLHWAARY--KSKEIAEI- 532
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
L+ AD +AK+ +G TPL H + S + E+L+
Sbjct: 533 -LISNGADINAKNKDGSTPL-HYAARYNSKETAEILI 567
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A++ G TPLH AA N E A++L+++GA
Sbjct: 714 TPLHYAAMNNSKETAEILIS----NGADINAKDEDGSTPLHYAASNNSKETAEILISNGA 769
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK N TPLH + Y+ + T + L+ AD +AK+ +G TPL H + S
Sbjct: 770 DINAKDKNEWTPLHCAARYNSKE----TAEILISNGADINAKNEDGSTPL-HYAARDNSK 824
Query: 170 KLRELLL 176
++ E+L+
Sbjct: 825 EIAEILI 831
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A Y EI + L+ + ++ A+N G TPLH AA+ E A++L+++GA
Sbjct: 516 TPLHWAARYKSKEIAEILIS----NGADINAKNKDGSTPLHYAARYNSKETAEILISNGA 571
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH Y+ R T + L+ AD +AKD TPL H + S
Sbjct: 572 DINAKNEDGSTPLH----YAARDNSKETAEILISNGADINAKDKNEWTPL-HCAAMNNSK 626
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 627 ETAEILI 633
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 20/158 (12%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDKVEL 78
C+Q +L +F L + N+ N +P H+S SLLE+ ++ ++
Sbjct: 264 CSQFNNLQSFLVYLDQ----TNDINTCFVYSPNFHLS----------SLLEYFISNGADI 309
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
A++ TPLH AA N E A++L+++GA I AK + G TPLH Y+ + T
Sbjct: 310 NAKDKNEWTPLHYAAMNNSKETAEILISNGADINAKEHGGWTPLH----YATSNNSKETA 365
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ L+ AD +AKD +G TPL H + S + E+L+
Sbjct: 366 EILISNGADINAKDEDGSTPL-HYAASNNSKETAEILI 402
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YN E + L+ + ++ A+N G TPLH AA++ E A++L+++GA
Sbjct: 780 TPLHCAARYNSKETAEILIS----NGADINAKNEDGSTPLHYAARDNSKEIAEILISNGA 835
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK + G TPLH Y+ R + L+ AD +AK++ G TPL H + S
Sbjct: 836 DINAKEHGGWTPLH----YAARDNSKEIAEILISNGADINAKEHGGWTPL-HWAARYKSK 890
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 891 ETAEILI 897
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YN E + L+ + ++ A++ G TPLH A N E ++L+++GA
Sbjct: 648 TPLHWAARYNSKETAEILIS----NGADINAKDKDGWTPLHYATSNNNKETTEILISNGA 703
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK N TPLH Y+ + T + L+ AD +AKD +G TPL H + S
Sbjct: 704 DINAKDKNEWTPLH----YAAMNNSKETAEILISNGADINAKDEDGSTPL-HYAASNNSK 758
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 759 ETAEILI 765
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A N EI + L+ + ++ A+ G TPLH
Sbjct: 465 EILISNGADINAKNE-DGSTPLHYAARDNSKEIAEILIS----NGADINAKEHGGWTPLH 519
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E A++L+++GA I AK +G TPLH Y+ R T + L+ AD +A
Sbjct: 520 WAARYKSKEIAEILISNGADINAKNKDGSTPLH----YAARYNSKETAEILISNGADINA 575
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
K+ +G TPL H + S + E+L+
Sbjct: 576 KNEDGSTPL-HYAARDNSKETAEILI 600
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + N E + L+ + ++ A++ G TPLH AA N E A++L+++GA
Sbjct: 351 TPLHYATSNNSKETAEILIS----NGADINAKDEDGSTPLHYAASNNSKETAEILISNGA 406
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK N TPLH + Y+ + T + L+ AD +AK+ +G TPL H + S
Sbjct: 407 DINAKDKNEWTPLHCAARYNSKE----TAEILISNGADINAKNEDGSTPL-HYAARYNSK 461
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 462 ETAEILI 468
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
CA + +L N + +N +N TPLH +A N EI + L+ + ++
Sbjct: 784 CAARYNSKETAEILISNGADINAKNE-DGSTPLHYAARDNSKEIAEILIS----NGADIN 838
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A+ G TPLH AA++ E A++L+++GA I AK + G TPLH + Y + T +
Sbjct: 839 AKEHGGWTPLHYAARDNSKEIAEILISNGADINAKEHGGWTPLHWAARYKSKE----TAE 894
Query: 140 TLLEYNADCSAKDNEGKTPL 159
L+ AD +AK+ +G TPL
Sbjct: 895 ILISNGADINAKNKDGSTPL 914
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A N E + L+ + ++ A++ TPLH
Sbjct: 564 EILISNGADINAKNE-DGSTPLHYAARDNSKETAEILIS----NGADINAKDKNEWTPLH 618
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA N E A++L+++GA I AK + G TPLH + Y+ + T + L+ AD +A
Sbjct: 619 CAAMNNSKETAEILISNGADINAKEHGGWTPLHWAARYNSKE----TAEILISNGADINA 674
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD +G TPL H + + + E+L+
Sbjct: 675 KDKDGWTPL-HYATSNNNKETTEILI 699
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH +A N E + L+ + ++ A++ TPLH AA+ E A++L+++G
Sbjct: 383 STPLHYAASNNSKETAEILIS----NGADINAKDKNEWTPLHCAARYNSKETAEILISNG 438
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AK +G TPLH Y+ R T + L+ AD +AK+ +G TPL H + S
Sbjct: 439 ADINAKNEDGSTPLH----YAARYNSKETAEILISNGADINAKNEDGSTPL-HYAARDNS 493
Query: 169 AKLRELLL 176
++ E+L+
Sbjct: 494 KEIAEILI 501
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + N E + L+ + ++ A++ TPLH AA N E A++L+++GA
Sbjct: 681 TPLHYATSNNNKETTEILIS----NGADINAKDKNEWTPLHYAAMNNSKETAEILISNGA 736
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH Y+ + T + L+ AD +AKD TPL H + S
Sbjct: 737 DINAKDEDGSTPLH----YAASNNSKETAEILISNGADINAKDKNEWTPL-HCAARYNSK 791
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 792 ETAEILI 798
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N EI + L+ + ++ A+ G TPLH AA+ E A++L+++GA
Sbjct: 846 TPLHYAARDNSKEIAEILIS----NGADINAKEHGGWTPLHWAARYKSKETAEILISNGA 901
Query: 110 FIEAKANNGMTPLHLS 125
I AK +G TPL+++
Sbjct: 902 DINAKNKDGSTPLYIA 917
>gi|72162543|ref|YP_290200.1| ATPase [Thermobifida fusca YX]
gi|71916275|gb|AAZ56177.1| ATPase [Thermobifida fusca YX]
Length = 802
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVAR 261
EL +VGL +K Q+R A + + R+ GL+V A P H F+G PGTGKT VAR
Sbjct: 529 ELDAMVGLEPVKRQVRAIAAQLRMARLREGQGLRVPA---PMRHFVFVGPPGTGKTTVAR 585
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
ILGR+ +G+L V E R DLVGE +G T KT + V L + +
Sbjct: 586 ILGRVFAALGLLTRADVVEASRADLVGEHLGATAIKTNQLVDRALGGVLFI 636
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRP-PHMA 247
E +E + E +L +++GL +K Q+R A + R G V RP H
Sbjct: 223 EVAAEEPIPVTEALAQLESMIGLEPVKQQVRAIAAAIEAARLRADAGYSVD--RPLRHFV 280
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLS 307
F G PGTGKT VAR L + + G+LPT RV E R DLVGE++G T KT V L
Sbjct: 281 FSGPPGTGKTSVARTLATIFHSFGLLPTARVVEASRADLVGEYLGATAIKTNELVDRALG 340
Query: 308 EITCL 312
+ +
Sbjct: 341 GVLFI 345
>gi|402572912|ref|YP_006622255.1| AAA ATPase [Desulfosporosinus meridiei DSM 13257]
gi|402254109|gb|AFQ44384.1| AAA+ family ATPase [Desulfosporosinus meridiei DSM 13257]
Length = 333
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ EL + +GL +K +R + + RR L + HM F GNPGTGKT V
Sbjct: 68 EILAELESFIGLVIVKRLIRDLQAFVEIQRRRSQEKL-IAEPLVLHMIFKGNPGTGKTTV 126
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR++GRL +G+L + E +R DLVGE++GHT KTR
Sbjct: 127 ARLVGRLFKEMGVLQKGHIIECERADLVGEYIGHTAQKTR 166
>gi|78185170|ref|YP_377605.1| ATPase [Synechococcus sp. CC9902]
gi|78169464|gb|ABB26561.1| ATPase [Synechococcus sp. CC9902]
Length = 301
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKT 257
++L+ EL +GL +K ++R+ A +L+D+ R+ + L A P HM+F G PGTGKT
Sbjct: 21 EQLDREL---IGLTSVKTRIREIAALLLVDQARQQMDLPSTA--PSLHMSFTGRPGTGKT 75
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA+ + ++L+ +G L + R DLVG++VGHT PKT+ +
Sbjct: 76 TVAQRMSQILHRLGYLRKGHLVTATRDDLVGQYVGHTAPKTKEMI 120
>gi|207099811|emb|CAQ52958.1| CD4-specific ankyrin repeat protein D57.2 [synthetic construct]
Length = 169
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A EIV+ LL++ ++ A +M GETPLH
Sbjct: 31 RILMANGADVNAMDH-FGFTPLHLAAKVGHLEIVEVLLKY----GADVNADDMDGETPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL +GA + A G TPLHL+ Y V+ L +Y AD +A
Sbjct: 86 LAAAIGHLEIVEVLLKNGADVNAHDTWGFTPLHLAASYG----HLEIVEVLRKYGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
D G+T D +S G+ L E+L
Sbjct: 142 XDKFGETTFD-ISIDNGNEDLXEIL 165
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A + G TPLHL+ + V+ LL+Y AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNAMDHFGFTPLHLAA----KVGHLEIVEVLLKYGADVNAD 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D +G+TPL HL+ G ++ E+LL
Sbjct: 77 DMDGETPL-HLAAAIGHLEIVEVLL 100
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L + LL+ + + + +TPLH++A EIV+ LL+ +
Sbjct: 51 LHLAAKVGHLEIVEVLLKYGADV--NADDMDGETPLHLAAAIGHLEIVEVLLK----NGA 104
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
++ A + +G TPLH+AA G E ++L +GA + A G T +S+
Sbjct: 105 DVNAHDTWGFTPLHLAASYGHLEIVEVLRKYGADVNAXDKFGETTFDISI 154
>gi|149179368|ref|ZP_01857926.1| probable stage V sporulation protein K-putative ATPase of the AAA
family [Planctomyces maris DSM 8797]
gi|148841804|gb|EDL56209.1| probable stage V sporulation protein K-putative ATPase of the AAA
family [Planctomyces maris DSM 8797]
Length = 593
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+ ++GL +K ++ + A + + ++R+ +G+ V A + H F GNPGTGKT VARI+
Sbjct: 245 LNALIGLDAVKAEVTRMANFLKIRQQRQEMGMPV-ASQTLHFVFTGNPGTGKTTVARIIA 303
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVG 303
++LY IL T E R +VG F+G T KT +
Sbjct: 304 KILYGYQILKTPNFIEADRATMVGGFIGQTAIKTNEVIA 342
>gi|337739170|ref|YP_004638450.1| rubisco expressions protein CbbX [Oligotropha carboxidovorans OM5]
gi|386031696|ref|YP_005945989.1| rubisco expressions protein CbbX [Oligotropha carboxidovorans OM4]
gi|336096670|gb|AEI04495.1| rubisco expressions protein CbbX [Oligotropha carboxidovorans OM4]
gi|336100301|gb|AEI08123.1| rubisco expressions protein CbbX [Oligotropha carboxidovorans OM5]
Length = 308
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 6/103 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+++L+ EL +GL +K ++R+ A +L++ R+ +GL A P HM+F GNPGTGK
Sbjct: 31 LEQLDREL---IGLAPVKTRIREIAALLLIERIRQRMGL--SAETPTLHMSFTGNPGTGK 85
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
T VA + +L+ +G + V V R +LVG+++GHT PKT+
Sbjct: 86 TTVALRMANILHKLGFVRRGHVVSVTRDELVGQYIGHTAPKTK 128
>gi|163783281|ref|ZP_02178274.1| ankyrin repeat domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159881389|gb|EDP74900.1| ankyrin repeat domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A EIV LLE ++ A+N+ G TPLH+A++NG + ++L+ GA
Sbjct: 81 TPLHLAANNGHREIVILLLE----KGADVNARNLNGWTPLHLASRNGYADIVRILVDRGA 136
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+ A+ G+TPLH++V + VK L+ AD SAKDN G T LD
Sbjct: 137 ELNARNGAGLTPLHVAVM----NGHLPVVKILVRSGADVSAKDNSGLTALD 183
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 13/144 (9%)
Query: 17 IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
I A+ GDL +++L RE + N +T LH +A + E+ K LL+
Sbjct: 18 IFKTAEGGDLETLKKVLDREKAEVRNHE----GETLLHAAAEFGHVELAKYLLKLGAEPN 73
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V ++ Y TPLH+AA NG E LLL GA + A+ NG TPLHL+ R+
Sbjct: 74 V----KDRYRATPLHLAANNGHREIVILLLEKGADVNARNLNGWTPLHLAS----RNGYA 125
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
V+ L++ A+ +A++ G TPL
Sbjct: 126 DIVRILVDRGAELNARNGAGLTPL 149
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL E + +N RN + TPLH+++ A+IV+ L++ EL A+N G TPLH+
Sbjct: 97 LLLEKGADVNARN-LNGWTPLHLASRNGYADIVRILVDRGA----ELNARNGAGLTPLHV 151
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
A NG K+L+ GA + AK N+G+T L + Y
Sbjct: 152 AVMNGHLPVVKILVRSGADVSAKDNSGLTALDFAREYG 189
>gi|374985078|ref|YP_004960573.1| ATPase [Streptomyces bingchenggensis BCW-1]
gi|297155730|gb|ADI05442.1| ATPase [Streptomyces bingchenggensis BCW-1]
Length = 633
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 201 LEN---ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
LEN EL +VGL +K Q+R + + + R GL V +PP H F G GTG
Sbjct: 341 LENALQELERMVGLEPVKRQVRALSAQLHMARLRAGQGLPV---QPPKRHFVFSGPSGTG 397
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
KT VARILGR+ Y +G+L D + E R DLVGE++G T K + L +
Sbjct: 398 KTTVARILGRVFYALGLLGGDHLVEAGRADLVGEYLGQTAVKANELIDSALGGV 451
>gi|160871996|ref|ZP_02062128.1| conserved hypothetical protein [Rickettsiella grylli]
gi|159120795|gb|EDP46133.1| conserved hypothetical protein [Rickettsiella grylli]
Length = 1068
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 10/139 (7%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
+++G L + L+ +N ++ E N TPLH +A +IVK L+ +EA
Sbjct: 508 SRNGHLDMVKYLIGKNATI--EANNDSGSTPLHEAARNGHLDIVKYLI----GKNATIEA 561
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
N G TPLH AA+NG + K L+ A E N G TPLHLSV S +ED V+
Sbjct: 562 NNDSGSTPLHEAARNGHLDIVKYLIKKNATSEISDNLGNTPLHLSV--SRNNED--VVRY 617
Query: 141 LLEYNADCSAKDNEGKTPL 159
L+E +AD +A+DN G T L
Sbjct: 618 LIEQDADINAQDNHGNTAL 636
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
M TPL+V++ ++VK L+ +EA N G TPLH AA+NG + K L+
Sbjct: 499 MGVTPLYVASRNGHLDMVKYLI----GKNATIEANNDSGSTPLHEAARNGHLDIVKYLIG 554
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
A IEA ++G TPLH + R+ VK L++ NA DN G TPL HLS
Sbjct: 555 KNATIEANNDSGSTPLHEAA----RNGHLDIVKYLIKKNATSEISDNLGNTPL-HLS 606
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +Q+G L ++N +L + N TPLH++ N IV L++ V
Sbjct: 438 LHWASQNGYFDMVNYLTKKNVNLEIKDN--YGDTPLHLATRNNFLRIVVFLID----HGV 491
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+E +N G TPL++A++NG + K L+ A IEA ++G TPLH + R+
Sbjct: 492 HVETKNKMGVTPLYVASRNGHLDMVKYLIGKNATIEANNDSGSTPLHEAA----RNGHLD 547
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
VK L+ NA A ++ G TPL
Sbjct: 548 IVKYLIGKNATIEANNDSGSTPL 570
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G++ L ++ L E + +TPLH ++ ++V L + V
Sbjct: 405 LHFSAAHGEIGIIDHLAKKGIRL--ELSDQFGRTPLHWASQNGYFDMVNYLTK----KNV 458
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
LE ++ YG+TPLH+A +N L+ HG +E K G+TPL+++ R+
Sbjct: 459 NLEIKDNYGDTPLHLATRNNFLRIVVFLIDHGVHVETKNKMGVTPLYVAS----RNGHLD 514
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
VK L+ NA A ++ G TPL
Sbjct: 515 MVKYLIGKNATIEANNDSGSTPL 537
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 38/150 (25%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLHV+ + E+V L+E ++ + + G TPLH A + ++LL H
Sbjct: 724 GRTPLHVAIWFGYTELVIYLVE----RGADVNSTDQLGNTPLHTAGITNYVNSIQILLTH 779
Query: 108 GAFIEAKANNGMTPL----------------------------------HLSVWYSIRSE 133
GA IEAK N G TPL H ++ S +
Sbjct: 780 GADIEAKNNEGNTPLQVAILSHAMDVVHYLVEHSMVNLNTQGSEGNTALHFAMIISDENL 839
Query: 134 DYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
V LLE +A+ K+N+G TPLD LS
Sbjct: 840 SLKMVTYLLEQHANSHIKNNKGNTPLDQLS 869
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++G L + L+ +N ++ E N TPLH +A +IVK L++
Sbjct: 537 LHEAARNGHLDIVKYLIGKNATI--EANNDSGSTPLHEAARNGHLDIVKYLIK----KNA 590
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY- 135
E + G TPLH++ + + L+ A I A+ N+G T LH++ + DY
Sbjct: 591 TSEISDNLGNTPLHLSVSRNNEDVVRYLIEQDADINAQDNHGNTALHVAAF-----NDYI 645
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLR 172
+ L+E AD ++N GKT L+ + + A +R
Sbjct: 646 ELINYLMEQGADTGIENNVGKTFLNSILDNGSVATIR 682
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 28/165 (16%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++G L + L+++N + +E + + TPLH+S N ++V+ L+E
Sbjct: 570 LHEAARNGHLDIVKYLIKKNAT--SEISDNLGNTPLHLSVSRNNEDVVRYLIE----QDA 623
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA-----------FIEAKANNGMTP---- 121
++ AQ+ +G T LH+AA N E L+ GA F+ + +NG
Sbjct: 624 DINAQDNHGNTALHVAAFNDYIELINYLMEQGADTGIENNVGKTFLNSILDNGSVATIRY 683
Query: 122 ------LHLSVWYSIRSEDYATVKTLLEY-NADCSAKDNEGKTPL 159
L+LS+ +I++ + L+E N D KD G+TPL
Sbjct: 684 FFKGKKLNLSLLEAIKNYHLNVITFLVEEENRDLKCKDRYGRTPL 728
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+ L S L + +M TPLH++ Y +IV L E V+L N G+TPL+
Sbjct: 86 KFLITKGSYLEIKERMMGNTPLHIAVQYGHVDIVDMLFE----RGVDLNIFNSQGDTPLN 141
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A K G + K L+ +GA+++ + G+TPLH Y+ + + A + L+ D +
Sbjct: 142 YAVKYGHLKLVKYLVKNGAYLD-EFYTGLTPLH----YAAQKNNLAVAEYLINKGMDVNK 196
Query: 151 KDNEGKTPL 159
G+T L
Sbjct: 197 MTVTGETAL 205
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+L+ ++ YG TPLH+A G E L+ GA + + G TPLH + +Y
Sbjct: 716 DLKCKDRYGRTPLHVAIWFGYTELVIYLVERGADVNSTDQLGNTPLH-----TAGITNYV 770
Query: 137 -TVKTLLEYNADCSAKDNEGKTPL 159
+++ LL + AD AK+NEG TPL
Sbjct: 771 NSIQILLTHGADIEAKNNEGNTPL 794
Score = 44.7 bits (104), Expect = 0.057, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PL ++ +VK L+E N L ++ T LH A +G ++ L
Sbjct: 269 SPLQIATLKGDLVLVKCLVENGAN----LAIKDANNSTLLHNAIHDGYSDLVNFFLEKKI 324
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+E K N+G T LH Y++ +D +VK+L+ AD +A + + TPL
Sbjct: 325 DLETKDNDGNTALH----YAVLMDDLESVKSLINAGADLTAVNIKSYTPL 370
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A HGC L + E +N RN TPL+++ Y + IVK L+
Sbjct: 43 AIRHGC------LDAVKFFVEAGVSVNVRN-FRGMTPLYLAVYYGYSPIVKFLIT--KGS 93
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY 128
+E++ + M G TPLH+A + G + +L G + + G TPL+ +V Y
Sbjct: 94 YLEIK-ERMMGNTPLHIAVQYGHVDIVDMLFERGVDLNIFNSQGDTPLNYAVKY 146
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
+ + TPL +S N +++ L++ K L+ + +Y E LH +A +G L
Sbjct: 364 IKSYTPLQISIVDNNINLMEFLVKETA-IKFTLKCEALY-EQILHFSAAHGEIGIIDHLA 421
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
G +E G TPLH W S ++ + V L + N + KDN G TPL HL+
Sbjct: 422 KKGIRLELSDQFGRTPLH---WAS-QNGYFDMVNYLTKKNVNLEIKDNYGDTPL-HLA 474
Score = 37.7 bits (86), Expect = 7.6, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL + + +IV LL + KV+L+ + +PL +A G K L+ +GA
Sbjct: 236 TPLFYATLFGYTDIVSFLL----SKKVKLDLKMPSHLSPLQIATLKGDLVLVKCLVENGA 291
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYAT-VKTLLEYNADCSAKDNEGKTPLDH 161
+ K N T LH ++ + Y+ V LE D KDN+G T L +
Sbjct: 292 NLAIKDANNSTLLHNAI-----HDGYSDLVNFFLEKKIDLETKDNDGNTALHY 339
>gi|123398895|ref|XP_001301365.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121882538|gb|EAX88435.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 674
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N EI + L+ + ++ A+N YG TPLH A N E A++L+++GA
Sbjct: 350 TPLHYTASNNWKEIAEILIS----NGADINAKNKYGCTPLHYTASNNWKEIAEILISNGA 405
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH Y+ R+ T + L+ AD +AK G TPL HL+ S
Sbjct: 406 DINAKDKDGFTPLH----YAARNNSKETAEILISNGADINAKTEIGFTPL-HLAARENSK 460
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 461 ETAEILI 467
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+ G TPLH+AA+ E A++L+++GA
Sbjct: 416 TPLHYAARNNSKETAEILIS----NGADINAKTEIGFTPLHLAARENSKETAEILISNGA 471
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
I AK +G TPLH Y+ R+ T + L+ AD +AKD + TPL +
Sbjct: 472 DINAKDKDGFTPLH----YAARNNSKETAEILISNGADINAKDEDRCTPLHY 519
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A + I K E ++ ++ A+N YG TPLH AA N A++L+++GA
Sbjct: 515 TPLHYAA----SNIWKETAEILISNGADINAKNKYGFTPLHYAASNIWKGIAEILISNGA 570
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK G TPLHL+ +I++ A + L+ AD +AKD +G TPL H + G
Sbjct: 571 DINAKTEIGCTPLHLA---AIKNSKEA-AEILISNGADINAKDKDGCTPL-HYAAGNTKK 625
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 626 ETAEILI 632
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 26/161 (16%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDKVEL 78
C++ +L +F L + N+ N +P H+S SLLE+ ++ ++
Sbjct: 263 CSKYNNLQSFLVYLDQ----TNDINTCFVYSPNFHLS----------SLLEYFISNGADI 308
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV---WYSIRSEDY 135
A+ G TPLH+AA EAA++L+++GA I AK +G TPLH + W I
Sbjct: 309 NAKTEIGCTPLHLAAIKNSKEAAEILISNGADINAKDKDGCTPLHYTASNNWKEI----- 363
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ L+ AD +AK+ G TPL H + ++ E+L+
Sbjct: 364 --AEILISNGADINAKNKYGCTPL-HYTASNNWKEIAEILI 401
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N + + TPLH++A N E + L+ + ++ A++ G TPLH
Sbjct: 563 EILISNGADINAKTEI-GCTPLHLAAIKNSKEAAEILIS----NGADINAKDKDGCTPLH 617
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
AA N E A++L+++GA I AK +G TPL+ +
Sbjct: 618 YAAGNTKKETAEILISNGADINAKNKDGCTPLYYA 652
>gi|345010733|ref|YP_004813087.1| ATPase AAA [Streptomyces violaceusniger Tu 4113]
gi|344037082|gb|AEM82807.1| AAA ATPase central domain protein [Streptomyces violaceusniger Tu
4113]
Length = 629
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVA 260
EL +VGL +K Q+R + + + R GL V +PP H F G GTGKT VA
Sbjct: 342 QELERMVGLEPVKRQVRALSAQLHMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVA 398
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
RILGR+ Y +G+L D + E R DLVGE++G T K + L +
Sbjct: 399 RILGRVFYALGLLGGDHLVEAGRADLVGEYLGQTAVKANELIDSALGGV 447
>gi|422879700|ref|ZP_16926165.1| stage V sporulation protein K [Streptococcus sanguinis SK1059]
gi|422929546|ref|ZP_16962487.1| stage V sporulation protein K [Streptococcus sanguinis ATCC 29667]
gi|422932515|ref|ZP_16965446.1| putative stage V sporulation protein K [Streptococcus sanguinis
SK340]
gi|332365111|gb|EGJ42874.1| stage V sporulation protein K [Streptococcus sanguinis SK1059]
gi|339614786|gb|EGQ19476.1| stage V sporulation protein K [Streptococcus sanguinis ATCC 29667]
gi|339618266|gb|EGQ22864.1| putative stage V sporulation protein K [Streptococcus sanguinis
SK340]
Length = 636
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-H 245
++ C+ A EL +VGL +K + + + +RR L + RP H
Sbjct: 338 CMKGCNNPLATNSNTLKELDRLVGLSTVKNMIHRILAYFSISQRR--LEINSSPVRPSMH 395
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
F G GTGKT+VAR+L ++ Y GI+ ++ + EV R+DL+GE+VG T PK +R
Sbjct: 396 FMFSGASGTGKTIVARLLTKIFYKHGIIKSNVLIEVGRSDLIGEYVGQTAPKVKR 450
>gi|321272354|gb|ADW80235.1| ankyrin repeat protein [Wolbachia endosymbiont wVitB of Nasonia
vitripennis phage WOVitB]
Length = 2474
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 8 RSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKS 66
R++ AT +H A+SG + L++ + ++ N + TPLHV+A +I++
Sbjct: 1184 RAKDKNNATPLHYAAESGHKAVAELLIKNGVEINDKANNNL--TPLHVAALKGXKDIIEL 1241
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
L+ +K E+ AQ++ G TPLH AA NG + LL+ + A ++A+ N+GMTPLH S
Sbjct: 1242 LIR----NKAEVRAQDIKGSTPLHAAAMNGSKDVIDLLIKNKAEVDARTNDGMTPLH-SA 1296
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ R + V L++ A+ +AK N G TPL
Sbjct: 1297 ALNGRGD---AVVFLIKNKAEVNAKANYGLTPL 1326
Score = 67.8 bits (164), Expect = 7e-09, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 39 LLNERNPVMAQ----TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAK 94
L N+ N +A TPLH + +IV +LLE V + A++ TPLH AA+
Sbjct: 1144 LTNKANASIATVEGITPLHFAVQSGHLKIVVALLE----HGVNIRAKDKNNATPLHYAAE 1199
Query: 95 NGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE 154
+G A+LL+ +G I KANN +TPLH++ + ++ L+ A+ A+D +
Sbjct: 1200 SGHKAVAELLIKNGVEINDKANNNLTPLHVAALKGXKD----IIELLIRNKAEVRAQDIK 1255
Query: 155 GKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
G TPL H + GS + +LL+ + E R
Sbjct: 1256 GSTPL-HAAAMNGSKDVIDLLIKNKAEVDAR 1285
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
+ TPLH +A +++ L++ +K E++A+ G TPLH AA NG +A L+
Sbjct: 1254 IKGSTPLHAAAMNGSKDVIDLLIK----NKAEVDARTNDGMTPLHSAALNGRGDAVVFLI 1309
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLSN 164
+ A + AKAN G+TPLH +V ED+ V LL N A +A+ G TPL H++
Sbjct: 1310 KNKAEVNAKANYGLTPLHAAV-----VEDHKDVVNLLIKNKAKVNAEGIAGSTPL-HVAV 1363
Query: 165 GPGSAKLRELLL 176
G ++ E+L+
Sbjct: 1364 EAGHKEIVEILV 1375
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRE----NPSLLNERNPVMAQTPLHVS 55
+Q D +R+ + T +H A +G L L+ + N S++N TPLH +
Sbjct: 1044 LQNKADVNARNDRDWTPLHAAAFNGHLEIVNALILKGANVNASVIN------GCTPLHYA 1097
Query: 56 AGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKA 115
+I LL+ + V Y TPLH AAK+G + K LL + A
Sbjct: 1098 IENGHEKIANILLKHGAHVNV---VDKTYNNTPLHYAAKDGHEKIVKALLTNKANASIAT 1154
Query: 116 NNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
G+TPLH ++++S V LLE+ + AKD TPL H + G + ELL
Sbjct: 1155 VEGITPLH----FAVQSGHLKIVVALLEHGVNIRAKDKNNATPL-HYAAESGHKAVAELL 1209
Query: 176 L 176
+
Sbjct: 1210 I 1210
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 12/187 (6%)
Query: 1 MQKNQDRRSRSAKP-ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
++K D +RS T+H A+ L + +L +N + N ++ + Q+PLH++A
Sbjct: 877 LKKGADINARSINLWTTLHFAAKGPSLEIXKFVLNQNLDV-NVKD-INGQSPLHIAAAXG 934
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
+ IVK + G + ++ + +G+T LH+AA+NG + ++LL + A + +G+
Sbjct: 935 RKNIVKFFV---GEAGLYVDDADNHGKTXLHIAAQNGHKDTVEVLLKNKASTVTQDMSGL 991
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGK-TPLDHLSNGPGSAKLRELLLWH 178
+PL +Y+IR+ K LLE + + + G TPL H + G +L LL +
Sbjct: 992 SPL----YYAIRNNHVNVAKVLLEKDTNVDINEAMGGFTPL-HEAAESGHLELVNFLLQN 1046
Query: 179 SEEQRKR 185
+ R
Sbjct: 1047 KADVNAR 1053
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ + E+VK L++ N + A+N G P+H+AA+ G + + L+ G
Sbjct: 1584 TILHIASQESNLEMVKCLVDEGSN----INAKNASGSKPIHIAAREGYKDTVEFFLSKGL 1639
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I T LH Y+ VK L+ AD +AKD G TP+ H++ G
Sbjct: 1640 SINELGTANQTLLH----YAAMKGRLEVVKYLIAQGADVNAKDTNGLTPM-HIAANFGYK 1694
Query: 170 KLRELLL-----WHSEEQRKRRALEACSE 193
+ E+LL +++ ++ RR LE ++
Sbjct: 1695 DVIEVLLKNGAVYNAVDKLCRRPLEMTND 1723
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A E+V LL+ +K ++ A+N TPLH AA NG E L+ GA
Sbjct: 1026 TPLHEAAESGHLELVNFLLQ----NKADVNARNDRDWTPLHAAAFNGHLEIVNALILKGA 1081
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE-GKTPLDHLSNGPGS 168
+ A NG TPLH Y+I + LL++ A + D TPL H + G
Sbjct: 1082 NVNASVINGCTPLH----YAIENGHEKIANILLKHGAHVNVVDKTYNNTPL-HYAAKDGH 1136
Query: 169 AKLRELLL 176
K+ + LL
Sbjct: 1137 EKIVKALL 1144
Score = 50.8 bits (120), Expect = 8e-04, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H AQ+G + LL+ S + + + +PL+ + N + K LLE N +
Sbjct: 961 LHIAAQNGHKDTVEVLLKNKASTVTQ--DMSGLSPLYYAIRNNHVNVAKVLLEKDTNVDI 1018
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ M G TPLH AA++G E LL + A + A+ + TPLH + + +
Sbjct: 1019 N---EAMGGFTPLHEAAESGHLELVNFLLQNKADVNARNDRDWTPLHAAAF----NGHLE 1071
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
V L+ A+ +A G TPL H + G K+ +LL H
Sbjct: 1072 IVNALILKGANVNASVINGCTPL-HYAIENGHEKIANILLKH 1112
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +Q +L + L+ E S +N +N P+H++A + V+ L G
Sbjct: 1586 LHIASQESNLEMVKCLVDEG-SNINAKN-ASGSKPIHIAAREGYKDTVEFFLS-KGLSIN 1642
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
EL N +T LH AA G E K L+A GA + AK NG+TP+H++ + +
Sbjct: 1643 ELGTAN---QTLLHYAAMKGRLEVVKYLIAQGADVNAKDTNGLTPMHIAANFGYKD---- 1695
Query: 137 TVKTLLEYNADCSAKDNEGKTPLD 160
++ LL+ A +A D + PL+
Sbjct: 1696 VIEVLLKNGAVYNAVDKLCRRPLE 1719
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + + ++V L++ +K ++ A+ + G TPLH+A + G E ++L+A+GA
Sbjct: 1324 TPLHAAVVEDHKDVVNLLIK----NKAKVNAEGIAGSTPLHVAVEAGHKEIVEILVANGA 1379
Query: 110 FIEAKANNGMTPL 122
+ K+NN +TPL
Sbjct: 1380 NVNVKSNN-LTPL 1391
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVE--LEAQNMY-GETPLHMAAKNGCNEAAKLL 104
TPLH + EIV+ LL+ DK+ + A+ G T LH+AAK G E K L
Sbjct: 2301 GNTPLHTATSKCYKEIVEVLLQHISRDKLNDFVNAKTTSSGTTSLHVAAKGGSLEVVKSL 2360
Query: 105 LAHGAFIEAKANNGMTPLHLS--------------VWYSIRSEDYATVKTLL-----EYN 145
L HGA + + G P+ LS ++ I++ + ++ L E+
Sbjct: 2361 LKHGAIYKIENKEGKIPIDLSKDQRVTNLLKLIEELFRDIKNGNVESISKLRAVKPDEFL 2420
Query: 146 ADCSAKDNEGKTPLD-HLSNGPG--SAKLRELL 175
A +A++N+G T L ++NG + KL E+L
Sbjct: 2421 AITNARNNQGNTLLQVAIANGHKNVAGKLLEML 2453
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 19/144 (13%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
L V AGY +IV+ LL +K + + T LH+AAK G E L+ GA +
Sbjct: 1423 LAVLAGYR--DIVEILLR----NKAYVNTKGPENTTLLHLAAKRGHKEIVNALITKGANV 1476
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
+A NG TPL+L+ E + + +TL+ AD + + EG PL H++ G G
Sbjct: 1477 DAMTINGTTPLYLAA-----QEGHGEIAETLIANRADVNIVNVEG-APL-HIAAGHGHDN 1529
Query: 171 LRELLLWHS-----EEQRKRRALE 189
+ E+LL + ++ + R +LE
Sbjct: 1530 VVEVLLSNGAKTNVKDNKSRTSLE 1553
Score = 46.6 bits (109), Expect = 0.014, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL+++A EI ++L+ ++ ++ N+ G PLH+AA +G + ++LL++GA
Sbjct: 1485 TPLYLAAQEGHGEIAETLIA----NRADVNIVNVEG-APLHIAAGHGHDNVVEVLLSNGA 1539
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY-NADCSAKDNEGKTPL 159
K N T L L+V + VK LL+Y D +AK N+ T L
Sbjct: 1540 KTNVKDNKSRTSLELAVSHG----HLQVVKMLLQYKKVDMNAKGNDDWTIL 1586
Score = 44.3 bits (103), Expect = 0.075, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
Q ++++A V+ LL+ D + +++ G TPLH A NG + +LL +G
Sbjct: 2236 QKDINIAASKGDIRTVQRLLK----DGADANDKDIDGRTPLHYAVSNGHIDIVNILLTNG 2291
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY------NADCSAKDNEGKTPLDHL 162
A + N G TPLH + + V+ LL++ N +AK T H+
Sbjct: 2292 ANVSQVTNKGNTPLHTATSKCYKE----IVEVLLQHISRDKLNDFVNAKTTSSGTTSLHV 2347
Query: 163 SNGPGSAKLRELLLWH 178
+ GS ++ + LL H
Sbjct: 2348 AAKGGSLEVVKSLLKH 2363
Score = 42.7 bits (99), Expect = 0.19, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
+ A+N TPL+ AA G + +LL + A N G TPLH Y+ +
Sbjct: 1758 VNAKNADSVTPLYYAAWKGYDGVVNILLQNKANPNVVGNKGFTPLH----YAAKFSHLKV 1813
Query: 138 VKTLLEYNADCSAKDNEGKTPLD 160
VK LL A +A + GKTP D
Sbjct: 1814 VKALLSNGAVYNAVSDSGKTPSD 1836
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 11 SAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE- 69
+A +H A G L + L+ + + N ++ TP+H++A + ++++ LL+
Sbjct: 1646 TANQTLLHYAAMKGRLEVVKYLIAQGADV-NAKD-TNGLTPMHIAANFGYKDVIEVLLKN 1703
Query: 70 ---WPGNDKV---ELEAQN-------MYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKAN 116
+ DK+ LE N + L A K + + + GAF+ AK
Sbjct: 1704 GAVYNAVDKLCRRPLEMTNDKDVINLLASTEKLFEAVKRNSSSEVENYIKAGAFVNAKNA 1763
Query: 117 NGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
+ +TPL+ + W + D V LL+ A+ + N+G TPL +
Sbjct: 1764 DSVTPLYYAAW---KGYD-GVVNILLQNKANPNVVGNKGFTPLHY 1804
Score = 37.7 bits (86), Expect = 6.6, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL+ +A +V LL+ N V G TPLH AAK + K LL++GA
Sbjct: 1767 TPLYYAAWKGYDGVVNILLQNKANPNV----VGNKGFTPLHYAAKFSHLKVVKALLSNGA 1822
Query: 110 FIEAKANNGMTPLHLSVWYSIRS 132
A +++G TP +V SI S
Sbjct: 1823 VYNAVSDSGKTPSDFTVDKSITS 1845
>gi|409046953|gb|EKM56432.1| hypothetical protein PHACADRAFT_91811 [Phanerochaete carnosa
HHB-10118-sp]
Length = 151
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y ++ ++ L ++AQ++Y ETPLH+AA+ G + LL HGA
Sbjct: 8 TPLHIAAQYGHVDVARTFL----THGAPVDAQDLYRETPLHIAARYGHVDIVYTLLKHGA 63
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ G TPL Y+ + LL+ AD +A D +G LDH + G A
Sbjct: 64 AVNAQGRKGWTPL----LYAASGGHTDASRVLLDNGADVAAMDTDGFRALDH-TKARGRA 118
Query: 170 KLRELLLWHSEE 181
++ LLL H +
Sbjct: 119 EVVRLLLDHGAD 130
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 84 YGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLE 143
+G TPLH+AA+ G + A+ L HGA ++A+ TPLH++ Y V TLL+
Sbjct: 5 FGGTPLHIAAQYGHVDVARTFLTHGAPVDAQDLYRETPLHIAARYG----HVDIVYTLLK 60
Query: 144 YNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+ A +A+ +G TPL + ++G + R LL
Sbjct: 61 HGAAVNAQGRKGWTPLLYAASGGHTDASRVLL 92
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 13/120 (10%)
Query: 38 SLLNERNPVMAQ-----TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMA 92
+ L PV AQ TPLH++A Y +IV +LL+ + AQ G TPL A
Sbjct: 24 TFLTHGAPVDAQDLYRETPLHIAARYGHVDIVYTLLKH----GAAVNAQGRKGWTPLLYA 79
Query: 93 AKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
A G +A+++LL +GA + A +G L + R+E V+ LL++ AD ++
Sbjct: 80 ASGGHTDASRVLLDNGADVAAMDTDGFRALDHTKARG-RAE---VVRLLLDHGADVHVEN 135
>gi|154416785|ref|XP_001581414.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121915641|gb|EAY20428.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 248
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH+ A N E +L G D + A+ + G+TPLH+AA + C E A++L+++G
Sbjct: 92 QTPLHI-ASMNNIEKTAEILISNGAD---INAKTINGQTPLHIAALHNCKEKAEILISNG 147
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I AKA G TPLHL+ ++ T + L+ AD +AKD+ TPL HL++ S
Sbjct: 148 ADINAKACKGYTPLHLAS----KNNSKETAEILISNGADINAKDDVKCTPL-HLASKNNS 202
Query: 169 AKLRELLL 176
+ E+L+
Sbjct: 203 KETAEILI 210
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 16/149 (10%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYN---KAEIVKSLLEWPGNDKVELEAQNMYGET 87
+L N + +N + + QTPLH++A +N KAEI+ S + ++ A+ G T
Sbjct: 108 EILISNGADINAK-TINGQTPLHIAALHNCKEKAEILIS-------NGADINAKACKGYT 159
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNAD 147
PLH+A+KN E A++L+++GA I AK + TPLHL+ ++ T + L+ AD
Sbjct: 160 PLHLASKNNSKETAEILISNGADINAKDDVKCTPLHLAS----KNNSKETAEILISNGAD 215
Query: 148 CSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+AKD +G TPL H++ + ++ E+L+
Sbjct: 216 INAKDKDGYTPL-HIATKNNNKEIAEILI 243
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A +H C + +L N + +N + TPLH++A E + L+ +
Sbjct: 32 AAMHNCKE------MAEILISNGADINAKTE-YGSTPLHIAASDYSEETAEILIL----N 80
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
E+ A++ G+TPLH+A+ N + A++L+++GA I AK NG TPLH++ ++ + +
Sbjct: 81 GAEINAKDDNGQTPLHIASMNNIEKTAEILISNGADINAKTINGQTPLHIAALHNCKEK- 139
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ L+ AD +AK +G TPL HL++ S + E+L+
Sbjct: 140 ---AEILISNGADINAKACKGYTPL-HLASKNNSKETAEILI 177
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL+ +A +N E+ + L+ + ++ A+ YG TPLH+AA + E A++L+ +GA
Sbjct: 27 TPLYHAAMHNCKEMAEILIS----NGADINAKTEYGSTPLHIAASDYSEETAEILILNGA 82
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I AK +NG TPLH++ +I T + L+ AD +AK G+TPL
Sbjct: 83 EINAKDDNGQTPLHIASMNNIEK----TAEILISNGADINAKTINGQTPL 128
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+ A++ G TPL+ AA + C E A++L+++GA I AK G TPLH I + DY
Sbjct: 16 ADFNAKDNDGWTPLYHAAMHNCKEMAEILISNGADINAKTEYGSTPLH------IAASDY 69
Query: 136 A--TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ T + L+ A+ +AKD+ G+TPL H+++ K E+L+
Sbjct: 70 SEETAEILILNGAEINAKDDNGQTPL-HIASMNNIEKTAEILI 111
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 11/112 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A +H C + ++L N + +N + TPLH+++ N E + L+ +
Sbjct: 131 AALHNCKEKAEILI------SNGADINAK-ACKGYTPLHLASKNNSKETAEILIS----N 179
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
++ A++ TPLH+A+KN E A++L+++GA I AK +G TPLH++
Sbjct: 180 GADINAKDDVKCTPLHLASKNNSKETAEILISNGADINAKDKDGYTPLHIAT 231
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 95 NGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE 154
N E+A++L+++GA AK N+G TPL+ + ++ + + L+ AD +AK
Sbjct: 2 NNSKESAEILISNGADFNAKDNDGWTPLYHAAMHNCKE----MAEILISNGADINAKTEY 57
Query: 155 GKTPLDHLSNGPGSAKLRELLLWHSEE 181
G TPL H++ S + E+L+ + E
Sbjct: 58 GSTPL-HIAASDYSEETAEILILNGAE 83
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N ++ V TPLH+++ N E + L+ + ++ A++ G TPLH
Sbjct: 174 EILISNGADINAKDDVKC-TPLHLASKNNSKETAEILIS----NGADINAKDKDGYTPLH 228
Query: 91 MAAKNGCNEAAKLLLAH 107
+A KN E A++L+++
Sbjct: 229 IATKNNNKEIAEILISN 245
>gi|242821429|ref|XP_002487679.1| ankyrin repeat-containing protein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218712600|gb|EED12025.1| ankyrin repeat-containing protein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1903
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 11/169 (6%)
Query: 9 SRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLL 68
SR P + A+ G+ ++LL N +N ++ +TPL +AG E+VK LL
Sbjct: 983 SRDRTP--LSWAAEKGNKTVVKQLLNTNKVDINSKDAEYGRTPLSWAAGNGDEEVVKQLL 1040
Query: 69 EWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF-IEAKANNGMTPLHLSVW 127
E DKV+++ ++ YG+TPL A + G K LL G ++ + G TPL
Sbjct: 1041 E---TDKVDIDLKDRYGQTPLSRAVEKGYKAVVKQLLDSGKVDVDLRDQYGRTPLS---- 1093
Query: 128 YSIRSEDYATVKTLLEY-NADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
++ + D A VK LL N +KD +G+TPL + A L++LL
Sbjct: 1094 WAADNGDEAIVKQLLNTSNVHVDSKDKDGRTPLSRAAERGHEAVLKQLL 1142
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A RLL E + + + +TPL +A IV+ L+E D ++ + +++YG T
Sbjct: 1756 AVVRLLVERDDVNADSKDNIGRTPLSWAAEGGYEAIVRLLVE---RDDIDTDPKDVYGLT 1812
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEA--KANNGMTPLHLSVWYSIRSEDYATVKTLL--E 143
PL +AA G +EA LLA +EA K NNG TPL + +E Y V LL
Sbjct: 1813 PLSIAAGQG-HEAVVQLLAERDEVEADSKDNNGRTPLSRAA-----AEGYQEVVQLLIER 1866
Query: 144 YNADCSAKDNEGKTPLDHLSNGPGSAKLREL 174
+ D ++DN G+TPL + G A ++ L
Sbjct: 1867 DDVDLESRDNIGRTPLSWAAEGDHDAVVQLL 1897
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G ++LL + ++ + ++TPL +A ++K LL+ + KV+++
Sbjct: 1129 AAERGHEAVLKQLLDTEKADIDSMDSEYSRTPLSWAAENGHNAVIKQLLD---SGKVDVD 1185
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLL-AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
+++ YG TPL AA G KLLL +++K +G TPL W + + +
Sbjct: 1186 SKDKYGRTPLSRAAGYGNEATVKLLLDTRKVDVDSKDEDGRTPLS---WAAANGHNAVVM 1242
Query: 139 KTLLEYNADCSAKDNEGKTPL 159
+ L D +KD G+TPL
Sbjct: 1243 QLLDSGKVDTDSKDKYGRTPL 1263
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+N R+ +TPL ++ +VK LL+ + KV++ +++ +G+TPL +A NG E
Sbjct: 1531 VNSRDG-FGRTPLWLATEKGYKAVVKQLLD---SGKVDVNSKDSFGQTPLLLAVGNGDEE 1586
Query: 100 AAKLLLAHGAF-IEAKANNGMTPLHLSVWYSIRSEDY-ATVKTLLEY-NADCSAKDNEGK 156
K LL G ++ K ++ PL + +E Y A V+ L+E N D ++KDN G+
Sbjct: 1587 VVKQLLDTGKVEMDLKDSDSQMPLRRAA-----AEGYVAIVRLLVEKDNVDANSKDNYGR 1641
Query: 157 TPLDHLSNGPGSAKLRELLL 176
TPL L+ G + +LLL
Sbjct: 1642 TPL-SLAAAQGHEAVVQLLL 1660
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++G ++LL ++ R+ +TPL ++A IV+ LL+ KV++E
Sbjct: 1406 AAENGYETIVKQLLDTGKVDVDSRDSEHGRTPLWLAAYKGHEAIVRHLLD---TGKVDVE 1462
Query: 80 AQNM-YGETPLHMAAKNGCNEAAKLLLAHGAF-IEAKANN-GMTPLHLSVWYSIRSEDYA 136
A++ YG+TPL AA G + K LL G ++AK + G TPL +S S Y
Sbjct: 1463 AKDSGYGQTPLWSAADRGHDAVVKHLLNTGKVDVDAKESTYGYTPL-----WSAASYGYE 1517
Query: 137 TVKTLL--EYNADCSAKDNEGKTPL 159
TV LL D +++D G+TPL
Sbjct: 1518 TVVKLLLDTGKVDVNSRDGFGRTPL 1542
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A G A RLL E + + V TPL ++AG +V+ L E D+VE ++
Sbjct: 1783 AAEGGYEAIVRLLVERDDIDTDPKDVYGLTPLSIAAGQGHEAVVQLLAE---RDEVEADS 1839
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAF-IEAKANNGMTPL 122
++ G TPL AA G E +LL+ +E++ N G TPL
Sbjct: 1840 KDNNGRTPLSRAAAEGYQEVVQLLIERDDVDLESRDNIGRTPL 1882
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA-H 107
QTPL +A Y +VK LL G V ++ + G TPL AA+NG KLLLA
Sbjct: 918 QTPLSFAARYGHEGVVKLLLAKEG---VHPDSADSRGRTPLSWAAENGHEGVVKLLLAKE 974
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNE-GKTPLDHLSNG 165
++ + TPL ++ + VK LL N D ++KD E G+TPL +
Sbjct: 975 NVHPDSVDSRDRTPLS----WAAEKGNKTVVKQLLNTNKVDINSKDAEYGRTPLSWAAGN 1030
Query: 166 PGSAKLRELL 175
+++LL
Sbjct: 1031 GDEEVVKQLL 1040
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 9/150 (6%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL + + + N +TPL +A IV+ L+E D VE ++++ +T
Sbjct: 1654 AVVQLLLKKDHIEADLNDNDGRTPLSWAAAEGYKAIVQLLVE---KDDVEADSKDNDDQT 1710
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANN-GMTPLHLSVWYSIRSEDYATVKTLLEY-N 145
PL AA GC +LL+ + G TPL + + R ++ A V+ L+E +
Sbjct: 1711 PLSWAAAMGCEAIVRLLVQRDDVDVDSKDKYGQTPLSRA---AERGKE-AVVRLLVERDD 1766
Query: 146 ADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
+ +KDN G+TPL + G A +R L+
Sbjct: 1767 VNADSKDNIGRTPLSWAAEGGYEAIVRLLV 1796
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D R + A D A ++LL + ++ +TPL ++A + IVK
Sbjct: 1287 DSRDSDYNRTPLWWAAWHSDEAAVKQLLDSGKVDADSKDTEHGRTPLWLAAEKGRKMIVK 1346
Query: 66 SLLEWPGNDKVELEAQNM-YGETPLHMAAKNGCNEAAKLLLAHGAF-IEAK-ANNGMTPL 122
LL+ KV++ ++ +G PL +AA+NG K LL G + K + +G PL
Sbjct: 1347 QLLD---TRKVDVNMKDSEHGRAPLWLAAENGYETIVKQLLDTGKVDVNMKDSEHGRAPL 1403
Query: 123 HLSVWYSIRSEDYATVKTLLEY-NADCSAKDNE-GKTPL 159
W + + VK LL+ D ++D+E G+TPL
Sbjct: 1404 ----WLAAENGYETIVKQLLDTGKVDVDSRDSEHGRTPL 1438
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL E + + QTPL +A IV+ L++ D V++++++ YG+T
Sbjct: 1688 AIVQLLVEKDDVEADSKDNDDQTPLSWAAAMGCEAIVRLLVQ---RDDVDVDSKDKYGQT 1744
Query: 88 PLHMAAKNGCNEAAKLLLAHGAF-IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY-N 145
PL AA+ G +LL+ ++K N G TPL ++ A V+ L+E +
Sbjct: 1745 PLSRAAERGKEAVVRLLVERDDVNADSKDNIGRTPLS----WAAEGGYEAIVRLLVERDD 1800
Query: 146 ADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
D KD G TPL ++ G G + +LL
Sbjct: 1801 IDTDPKDVYGLTPL-SIAAGQGHEAVVQLL 1829
>gi|217977381|ref|YP_002361528.1| CbbX protein [Methylocella silvestris BL2]
gi|217502757|gb|ACK50166.1| CbbX protein [Methylocella silvestris BL2]
Length = 307
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTG 255
+D L+ EL VGL +K ++R+ +++D R+ LGL PP HM+F GN GTG
Sbjct: 35 LDTLDREL---VGLAPVKERIRQICALLIVDRVRRRLGL---ISEPPTLHMSFTGNAGTG 88
Query: 256 KTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
KT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 89 KTTVALRMAEILHKLGYIRKGHLVSVTRDDLVGQYIGHTAPKTK 132
>gi|326433271|gb|EGD78841.1| hypothetical protein PTSG_01817 [Salpingoeca sp. ATCC 50818]
Length = 361
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 92/155 (59%), Gaps = 13/155 (8%)
Query: 24 GDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM 83
GD++ F +P++ +R+ M PLH++A YN +EIV+ L+++ K ++ ++
Sbjct: 82 GDIVRFLLQHEADPAI-KDRDGKM---PLHIAARYNHSEIVRRLIDF----KADVNGRDP 133
Query: 84 YGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLE 143
G+TPLH A++ ++A ++LL++ A + AK + G T LH + S+ D +V+ L+E
Sbjct: 134 TGDTPLHDASQYNSHKAVRVLLSYAADVHAKNDAGWTALHTA---SVHGSDM-SVQLLVE 189
Query: 144 YNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ A+ + +D G TPL H + G+A + + LL H
Sbjct: 190 HGANVNCRDANGWTPL-HFACLEGAAGVVKALLRH 223
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R L + + +N R+P TPLH ++ YN + V+ LL + ++ A+N G T LH
Sbjct: 119 RRLIDFKADVNGRDPT-GDTPLHDASQYNSHKAVRVLLSYAA----DVHAKNDAGWTALH 173
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A+ +G + + +LL+ HGA + + NG TPLH ++ VK LL + A +A
Sbjct: 174 TASVHGSDMSVQLLVEHGANVNCRDANGWTPLH----FACLEGAAGVVKALLRHGALINA 229
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQ--RKRRALEACSETKAKMDELENELSNI 208
+D+ G TP+ +++ ++ ELL H E + A E + +D +++ L +I
Sbjct: 230 RDHGGWTPM-YVAQQNERDEIVELLRQHGAEDMLQLDTAFEIWLQETGLLDHVKDALLSI 288
Query: 209 VGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
G H + G L E ++ G+ RP H L
Sbjct: 289 -GAHSFETLQVMIDSGDLTMELLQSDGV-----RPAHARLL 323
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
+ A PLH + + + L+ N + ++ YG TPLH A NG K+LL
Sbjct: 1 MQALAPLHRACRDGNVKAAEKLISKHAN----VNRRDAYGSTPLHYACWNGHLNLVKILL 56
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
HGA + + N G T LH + + V+ LL++ AD + KD +GK PL
Sbjct: 57 DHGADVNHRDNYGGTALHDASFKGFGD----IVRFLLQHEADPAIKDRDGKMPL 106
>gi|18312929|ref|NP_559596.1| ankyrin repeat-containing protein [Pyrobaculum aerophilum str. IM2]
gi|34395901|sp|Q8ZWC4.1|Y1861_PYRAE RecName: Full=Putative ankyrin repeat protein PAE1861
gi|18160424|gb|AAL63778.1| hypothetical protein with 4 ankyrin repeats [Pyrobaculum aerophilum
str. IM2]
Length = 256
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 13/114 (11%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+ AG A +VK LLE+ V+ A++ +G+TPLHMA+++ C + +LLL G +
Sbjct: 129 LHLVAG--DAGLVKLLLEY----GVDPNARDAHGKTPLHMASEHNCAQCVELLLKRGPDV 182
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
K G TPLH ++D +K LL Y AD +A DN G+TPL + +G
Sbjct: 183 NVKDGAGRTPLHY-------ADDVDCIKLLLRYGADLNAVDNMGRTPLHYAEDG 229
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 9/99 (9%)
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
L A + E L+ AA+NGC++A + +LA G + A++G + LHL D
Sbjct: 87 LSASAVGVEEALYTAARNGCHKAVRYMLARG--VRPGASHGESLLHLVAG------DAGL 138
Query: 138 VKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
VK LLEY D +A+D GKTPL H+++ A+ ELLL
Sbjct: 139 VKLLLEYGVDPNARDAHGKTPL-HMASEHNCAQCVELLL 176
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 9 SRSAKPATIHGCA----QSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
+R +P HG + +GD +LL E N R+ +TPLH+++ +N A+ V
Sbjct: 115 ARGVRPGASHGESLLHLVAGDA-GLVKLLLEYGVDPNARD-AHGKTPLHMASEHNCAQCV 172
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ LL+ G D + ++ G TPLH A C KLLL +GA + A N G TPLH
Sbjct: 173 ELLLKR-GPD---VNVKDGAGRTPLHYADDVDC---IKLLLRYGADLNAVDNMGRTPLHY 225
Query: 125 S 125
+
Sbjct: 226 A 226
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G E LL G + + + G TPL +Y+ D TV L++ AD +A+
Sbjct: 9 AARRGEAELLTRLLNEGCSPDVQDDYGRTPL----YYAAERGDVGTVDLLIKAGADPNAR 64
Query: 152 DNEGKTPL 159
D EGKTP+
Sbjct: 65 DREGKTPI 72
>gi|123469697|ref|XP_001318059.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121900808|gb|EAY05836.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 572
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 45 PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLL 104
++ T LH++A N EIV+ L+ N + +N YGET LH+AA N E A+LL
Sbjct: 412 TILGNTALHIAAYNNTKEIVELLISHGIN----INEKNKYGETALHIAACNNSKETAELL 467
Query: 105 LAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSN 164
++HG I K G T LH++ ++ Y T + L+ + + + KDN+ KT L H++
Sbjct: 468 ISHGININEKNAIGQTALHIAAEFNC----YETAELLISHGININEKDNDRKTAL-HIAA 522
Query: 165 GPGSAKLRELLLWH 178
S ++ ELL+ H
Sbjct: 523 HNNSKEMVELLISH 536
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A YN E + L+ N + + + G+T LH+AA N E A+LL++HG I
Sbjct: 287 LHIAAEYNCYETAELLISQCIN----INIKTILGKTALHIAAHNNRKEMAELLISHGINI 342
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
K N+ T LH++ Y+ Y T + L+ + + + KDN+GKT L H++ ++
Sbjct: 343 NEKDNDRKTALHIAEEYNC----YETAELLISHGININEKDNDGKTAL-HIAARYKYKEM 397
Query: 172 RELLL 176
ELL+
Sbjct: 398 AELLI 402
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N +T LH++A N E + L+ N + +N G+T LH+AA+ C E
Sbjct: 441 INEKNK-YGETALHIAACNNSKETAELLISHGIN----INEKNAIGQTALHIAAEFNCYE 495
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HG I K N+ T LH++ + + V+ L+ + + + KD +G+T L
Sbjct: 496 TAELLISHGININEKDNDRKTALHIAAHNNSKE----MVELLISHGININEKDKDGETAL 551
Query: 160 DHLSNGPGSAKLRELL 175
D GS ++ L+
Sbjct: 552 D----IAGSNNIKSLI 563
>gi|443493451|ref|YP_007371598.1| ESX-1 ATPase, AAA family, EccA1 [Mycobacterium liflandii 128FXT]
gi|442585948|gb|AGC65091.1| ESX-1 ATPase, AAA family, EccA1 [Mycobacterium liflandii 128FXT]
Length = 550
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL +GL +K QL ++ ++ R+A G+KV A+ HM F G PGTGKT +
Sbjct: 262 EAQGELDRQIGLSRVKSQLERYRAATMMARIREAKGMKV-AQPSKHMIFTGPPGTGKTTI 320
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
AR++ +L +G++ ++ E R D V E+ G + KT + + L +
Sbjct: 321 ARVVANMLAGLGVIAEPKLVETSRKDFVAEYEGQSAAKTAKTIDQALGGV 370
>gi|392405905|ref|YP_006442515.1| AAA+ family ATPase [Mycobacterium chubuense NBB4]
gi|390619041|gb|AFM20190.1| AAA+ family ATPase [Mycobacterium chubuense NBB4]
Length = 596
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
++E E +L + +GL +K + K + D A G VG R HM +G PGT KT
Sbjct: 296 LEEAERDLQSFIGLGGVKAHINKLKNVQIYDRAMAARGEGVGQRNALHMTLVGPPGTAKT 355
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+AR++G++ + +GIL + EV R DLVG +G T KT
Sbjct: 356 SIARVMGKMYFGLGILTSPEFIEVSRKDLVGGVIGETEAKT 396
>gi|302541047|ref|ZP_07293389.1| LOW QUALITY PROTEIN: ATPase [Streptomyces hygroscopicus ATCC 53653]
gi|302458665|gb|EFL21758.1| LOW QUALITY PROTEIN: ATPase [Streptomyces himastatinicus ATCC
53653]
Length = 449
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVA 260
EL +VGL +K Q+R + + + R GL V +PP H F G GTGKT VA
Sbjct: 162 QELERMVGLEPVKRQVRALSAQLHMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVA 218
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
RILGR+ Y +G+L D + E R DLVGE++G T K + L +
Sbjct: 219 RILGRVFYALGLLGGDHLVEAGRADLVGEYLGQTAVKANELIDSALGGV 267
>gi|123500653|ref|XP_001327906.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121910842|gb|EAY15683.1| hypothetical protein TVAG_405970 [Trichomonas vaginalis G3]
Length = 300
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
KN D S S I + GD + ++E+P +++ R+ M TPLHV+ + E
Sbjct: 135 KNNDFDSTSLFLDDIFTACKKGDHIRVLECIKEDPEVISTRDSHM-NTPLHVAVLSKQYE 193
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
K+LLE N A + Y TPLH + N + +LLL H A + A A NG+TPL
Sbjct: 194 ACKTLLENGANPN----AISSYDYTPLHYSCMNEAQDIVELLLNHNADVAAAAENGLTPL 249
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
HL+ + + L+E AD +A G+TPL
Sbjct: 250 HLASG----GTNLKICEILVEKGADVNATGKNGETPL 282
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
+LE D + ++ + TPLH+A + EA K LL +GA A ++ TPLH
Sbjct: 161 VLECIKEDPEVISTRDSHMNTPLHVAVLSKQYEACKTLLENGANPNAISSYDYTPLH--- 217
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
YS +E V+ LL +NAD +A G TPL HL++G + K+ E+L+
Sbjct: 218 -YSCMNEAQDIVELLLNHNADVAAAAENGLTPL-HLASGGTNLKICEILV 265
>gi|403072298|pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
gi|403072299|pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++G+ + L+ EN + +N + +TPLH +A E+VK L+ ++
Sbjct: 11 AAENGNKDRVKDLI-ENGADVNASDS-DGRTPLHHAAENGHKEVVKLLISKG----ADVN 64
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G TPLH AA+NG E KLL++ GA + AK ++G TPLH ++ + VK
Sbjct: 65 AKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH----HAAENGHKEVVK 120
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
L+ AD + D++G+TPLD
Sbjct: 121 LLISKGADVNTSDSDGRTPLD 141
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK L+E + ++ A + G TPLH AA+NG E KLL++ GA + AK ++G TPLH
Sbjct: 20 VKDLIE----NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH 75
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
++ + VK L+ AD +AKD++G+TPL H
Sbjct: 76 ----HAAENGHKEVVKLLISKGADVNAKDSDGRTPLHH 109
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+NG + K L+ +GA + A ++G TPLH ++ + VK L+ AD +AK
Sbjct: 11 AAENGNKDRVKDLIENGADVNASDSDGRTPLH----HAAENGHKEVVKLLISKGADVNAK 66
Query: 152 DNEGKTPLDH 161
D++G+TPL H
Sbjct: 67 DSDGRTPLHH 76
>gi|162606432|ref|XP_001713246.1| CbbX protein homolog [Guillardia theta]
gi|17433081|sp|Q9SCC7.1|CBBX_GUITH RecName: Full=Protein cbbX homolog, chloroplastic; Flags: Precursor
gi|6687646|emb|CAB65663.1| CbbX protein homologue [Guillardia theta]
gi|12580712|emb|CAC27030.1| CbbX protein homolog [Guillardia theta]
Length = 371
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNP 252
K +++L+N+L VGL +K ++R+ A +++D+ R+ LGL P HM F G P
Sbjct: 85 VKEILEKLDNDL---VGLVPVKSRVREIAALLVVDKLRRNLGLDTSV--PSLHMCFTGAP 139
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VA +G++L +G + + R DLVG++VGHT PKT+
Sbjct: 140 GTGKTTVAMRMGQILQRMGYCRSGHLVVATRDDLVGQYVGHTAPKTK 186
>gi|183985414|ref|YP_001853705.1| hypothetical protein MMAR_5443 [Mycobacterium marinum M]
gi|183178740|gb|ACC43850.1| conserved hypothetical membrane protein [Mycobacterium marinum M]
Length = 573
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL +GL +K QL ++ ++ R+A G+KV A+ HM F G PGTGKT +
Sbjct: 285 EAQEELDRQIGLSRVKSQLERYRAATMMARIREAKGMKV-AQPSKHMIFTGPPGTGKTTI 343
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
AR++ +L +G++ ++ E R D V E+ G + KT + + L +
Sbjct: 344 ARVVANMLAGLGVIAEPKLVETSRKDFVAEYEGQSAAKTAKTIDQALGGV 393
>gi|365865115|ref|ZP_09404780.1| hypothetical protein SPW_5084 [Streptomyces sp. W007]
gi|364005444|gb|EHM26519.1| hypothetical protein SPW_5084 [Streptomyces sp. W007]
Length = 663
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 401 GELDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVRR-HLVFTGSPGTGKTTVARL 459
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 460 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 496
>gi|123490856|ref|XP_001325707.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121908610|gb|EAY13484.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 330
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 78/141 (55%), Gaps = 9/141 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A S + + LL ++ S +N R+ T LH +A N E K L+ G D + +
Sbjct: 194 AASCNSIKTTELLIKHKSNVNARD-FSECTALHYAAWCNCPETAKFLI-LHGAD---VNS 248
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
N YG+TPLH +AKN E A++L++HGA I K N+G TPLH Y++R T K
Sbjct: 249 MNKYGKTPLHYSAKNNWIEIARILISHGANINLKDNDGKTPLH----YAVRFIPQDTAKF 304
Query: 141 LLEYNADCSAKDNEGKTPLDH 161
L+ + AD +KDN G TP+ +
Sbjct: 305 LIFHGADKDSKDNNGMTPVQY 325
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+++ A++ G+T LH++ KN E +KLL++H + + AK NG T LH Y++++++
Sbjct: 10 LDINAKDKNGQTALHLSVKNKNKEISKLLISHDSDVNAKNKNGQTALH----YAVKNKNK 65
Query: 136 ATVKTLLEYNADCSAKDNEGK-TPLDHLSNGPGSAKLRELLLWH 178
++ LL + A+ +AKDN + TPL + ++ ++LL H
Sbjct: 66 EIIELLLSHGANVNAKDNVCEDTPLHFAARYNKKIEIIKILLSH 109
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 11/156 (7%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYN-KAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +N ++ V TPLH +A YN K EI+K LL + N +T LH
Sbjct: 70 LLLSHGANVNAKDNVCEDTPLHFAARYNKKIEIIKILLSHDA----LINKTNRKYQTALH 125
Query: 91 MAAKNGCNEAAKLLLAHGAFIE-AKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCS 149
AAK + LL+++GA+I T LH Y+ + D T K LL + ++
Sbjct: 126 YAAKYKHRKILMLLISNGAYINLPNKRYEKTALH----YAAKYNDIETAKILLSHGSNIR 181
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+D +G PL H + S K ELL+ H R
Sbjct: 182 KQDAKGYIPL-HYAASCNSIKTTELLIKHKSNVNAR 216
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH SA N EI + L+ N + L+ + G+TPLH A + + AK L+ HG
Sbjct: 254 KTPLHYSAKNNWIEIARILISHGAN--INLKDND--GKTPLHYAVRFIPQDTAKFLIFHG 309
Query: 109 AFIEAKANNGMTPLHLSV 126
A ++K NNGMTP+ SV
Sbjct: 310 ADKDSKDNNGMTPVQYSV 327
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 10/170 (5%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N + + + +H A+ + ++L + +L+N+ N QT LH +A Y +I
Sbjct: 77 NVNAKDNVCEDTPLHFAARYNKKIEIIKILLSHDALINKTNRKY-QTALHYAAKYKHRKI 135
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ N Y +T LH AAK E AK+LL+HG+ I + G PLH
Sbjct: 136 LMLLI---SNGAYINLPNKRYEKTALHYAAKYNDIETAKILLSHGSNIRKQDAKGYIPLH 192
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS--NGPGSAKL 171
Y+ T + L+++ ++ +A+D T L + + N P +AK
Sbjct: 193 ----YAASCNSIKTTELLIKHKSNVNARDFSECTALHYAAWCNCPETAKF 238
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 103 LLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHL 162
LL+ I AK NG T LHLSV ++++ K L+ +++D +AK+ G+T L H
Sbjct: 4 FLLSFDLDINAKDKNGQTALHLSV----KNKNKEISKLLISHDSDVNAKNKNGQTAL-HY 58
Query: 163 SNGPGSAKLRELLLWH 178
+ + ++ ELLL H
Sbjct: 59 AVKNKNKEIIELLLSH 74
>gi|149071987|ref|YP_001293520.1| Putative rubisco expression protein [Rhodomonas salina]
gi|134302938|gb|ABO70742.1| Putative rubisco expression protein [Rhodomonas salina]
Length = 289
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 180 EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG 239
EE KR+ E +D+L+ +L +GL +K ++++ A +++ RK+LGL
Sbjct: 9 EEYEKRQIQEV-------LDQLDRDL---IGLVPVKSRIKEIAALLIIHRLRKSLGLS-S 57
Query: 240 ARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT- 298
A HM+F G+PGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT
Sbjct: 58 ANPGLHMSFTGSPGTGKTTVAVKMADILFRLGYIRKGHLVTVTRDDLVGQYIGHTAPKTK 117
Query: 299 ---RRRVGHLL 306
+R +G LL
Sbjct: 118 EVLKRAMGGLL 128
>gi|340713711|ref|XP_003395381.1| PREDICTED: hypothetical protein LOC100648936 [Bombus terrestris]
Length = 1610
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 44 NP-VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAK 102
NP V +TPLHV+AG K LL + + + + TPLH+AA+ G E K
Sbjct: 266 NPQVYTETPLHVAAGLGSVMCTKLLLTYGADVRFRFGSMK---STPLHLAAEEGSAECTK 322
Query: 103 LLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
LLL GA EAK G TP+HL+V S+ T+ LL A + +DN+G+TPL
Sbjct: 323 LLLDAGAECEAKNARGQTPMHLAVL----SQSMETLDVLLNIGAKVNIEDNDGRTPL 375
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
M TPLH++A AE K LL+ E EA+N G+TP+H+A + E +LL
Sbjct: 304 MKSTPLHLAAEEGSAECTKLLLDAGA----ECEAKNARGQTPMHLAVLSQSMETLDVLLN 359
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
GA + + N+G TPLH +V S R + VK LL+ A + D G TPL
Sbjct: 360 IGAKVNIEDNDGRTPLHAAVTKSARGIEL--VKILLQAGALVNKADKFGYTPL 410
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN--EAAKLLLA 106
QTP+H++ E + LL KV +E + G TPLH A E K+LL
Sbjct: 339 QTPMHLAVLSQSMETLDVLLNIGA--KVNIEDND--GRTPLHAAVTKSARGIELVKILLQ 394
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHL 162
GA + G TPLH++ +E+ TV LL AD +A+ G + L +
Sbjct: 395 AGALVNKADKFGYTPLHIAAL----NENSPTVIMLLSKGADLTARTKGGISALSFI 446
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 11/124 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T L VS + +VK+LL+ + + A++ G TPLH+AA + LL HGA
Sbjct: 140 TCLLVSCYLSHVNVVKALLK---SKNAIISARDSDGRTPLHLAACTASLTILEELLKHGA 196
Query: 110 F-IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH--LSNGP 166
E TPLH Y+ + D A VK L++ AD +A + GK+PL + L+N
Sbjct: 197 NPCEWDFGKKYTPLH----YAAATGDLACVKCLIKSQADVNAGIH-GKSPLYYAVLNNAA 251
Query: 167 GSAK 170
K
Sbjct: 252 DCVK 255
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 17 IHGCAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
+H A + L + LL+ NP E + TPLH +A VK L++
Sbjct: 176 LHLAACTASLTILEELLKHGANPC---EWDFGKKYTPLHYAAATGDLACVKCLIK----S 228
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
+ ++ A ++G++PL+ A N + K LL GA TPLH++
Sbjct: 229 QADVNA-GIHGKSPLYYAVLNNAADCVKALLEAGASPNNPQVYTETPLHVAAGLG----S 283
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
K LL Y AD + K+ HL+ GSA+ +LLL
Sbjct: 284 VMCTKLLLTYGADVRFRFGSMKSTPLHLAAEEGSAECTKLLL 325
>gi|402298522|ref|ZP_10818205.1| stage V sporulation protein K [Bacillus alcalophilus ATCC 27647]
gi|401726258|gb|EJS99497.1| stage V sporulation protein K [Bacillus alcalophilus ATCC 27647]
Length = 788
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
Query: 185 RRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
++ +E + T ++ L ++L ++GL +K ++ K + + +RR G
Sbjct: 232 KKQMEQLTSTDHEVSAL-SQLDKMIGLDPIKARIEKLYQYLQYQKRRTESGFVTKDELSL 290
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
HM F GNPGTGKT +AR++ ++ Y +G+L V EV R+ LVG +VG T +T + +
Sbjct: 291 HMIFTGNPGTGKTTLARLMAKIYYELGLLEHSEVHEVDRSQLVGAYVGQTEEQTLQAI 348
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E KAK + EL +++GL ++K +L K + + + R+ L A + + F G
Sbjct: 515 EEKAKEKNAQLELKSLIGLEQVKRELDKLTSFIKVQQLRRKENLPTNAIQL-NTIFSGAS 573
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GTGKT VA+I ++L +G+L + R++LV ++G T KT+ ++
Sbjct: 574 GTGKTTVAQIYAQVLKELGVLKRGHLVIASRSELVAGYIGQTAAKTKEKI 623
>gi|297195897|ref|ZP_06913295.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152985|gb|EFH32081.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 804
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+++ EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 539 NDVLGELDALVGLDSVKREVRTLTNMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTT 597
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 598 VARLYGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 638
>gi|302540786|ref|ZP_07293128.1| putative sporulation protein K [Streptomyces hygroscopicus ATCC
53653]
gi|302458404|gb|EFL21497.1| putative sporulation protein K [Streptomyces himastatinicus ATCC
53653]
Length = 816
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 555 GELDALVGLESVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTTVARL 613
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 614 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 650
>gi|123490814|ref|XP_001325696.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121908599|gb|EAY13473.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 185
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 5 QDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
++++ K A +H A+ L + L+ ++ NE++ + +T LH++ YN E
Sbjct: 18 KNKKYHYGKTA-LHNAARYNSNLTVEVLISHGANI-NEKD-IKGKTALHIAVKYNSKETA 74
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ L+ N + ++ GET LH AA N E A++L++HGA I K NG T LH+
Sbjct: 75 EVLISHGAN----INEKDKNGETALHFAAINNSKETAEVLISHGANINEKDKNGETALHI 130
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+ Y+ + T + L+ + A+ + K+ +G+TPLD
Sbjct: 131 AAKYNSKE----TAEVLISHGANINEKNEDGETPLD 162
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ S++E+ + V + YG+T LH AA+ N ++L++HGA I K G T LH
Sbjct: 4 IPSIIEYFPSHGVSKNKKYHYGKTALHNAARYNSNLTVEVLISHGANINEKDIKGKTALH 63
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++V Y+ + T + L+ + A+ + KD G+T L H + S + E+L+ H
Sbjct: 64 IAVKYNSKE----TAEVLISHGANINEKDKNGETAL-HFAAINNSKETAEVLISH 113
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH +A N E + L+ N + ++ GET LH+AAK E
Sbjct: 84 INEKDK-NGETALHFAAINNSKETAEVLISHGAN----INEKDKNGETALHIAAKYNSKE 138
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
A++L++HGA I K +G TPL ++ + E+
Sbjct: 139 TAEVLISHGANINEKNEDGETPLDIAALMNNEEEN 173
>gi|123471836|ref|XP_001319115.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121901891|gb|EAY06892.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 722
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 36/188 (19%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ ++ Q L+ S+ N + T LH++A N +I + L+ V
Sbjct: 425 LHYAIENNNIQIIQLLISHGASV--NSNDIDFNTTLHIAAERNNTKIAELLISLG----V 478
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY-------- 128
+ A+N G+ PLH A+ N C + K L+++G++I K NG TPLH + +Y
Sbjct: 479 NVNAKNKDGQIPLHYASMNNCQDVGKFLISNGSYINIKDKNGKTPLHYATFYKKKEFAEM 538
Query: 129 ------SIRSED--------YA-------TVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
+ SED YA TV+ L+ + A+ +A D GKTPL H +
Sbjct: 539 LITSKADVYSEDIDKKTPLHYAVENNIKETVQLLILHGANVNATDKNGKTPL-HFATKNN 597
Query: 168 SAKLRELL 175
S ++ ++L
Sbjct: 598 SIEIVKIL 605
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A+++ C G + L N S +N ++ +TPLH + Y K E + L+
Sbjct: 494 ASMNNCQDVG------KFLISNGSYINIKDK-NGKTPLHYATFYKKKEFAEMLIT----S 542
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
K ++ ++++ +TPLH A +N E +LL+ HGA + A NG TPLH ++ ++
Sbjct: 543 KADVYSEDIDKKTPLHYAVENNIKETVQLLILHGANVNATDKNGKTPLH----FATKNNS 598
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
VK L AD +++D TPL H++ + +L+ +
Sbjct: 599 IEIVKILCAKRADVNSQDINLITPL-HIAANNNCIDVINVLISY 641
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH + N EIVK L + ++ +Q++ TPLH+AA N C + +L+++G
Sbjct: 587 KTPLHFATKNNSIEIVKILCA----KRADVNSQDINLITPLHIAANNNCIDVINVLISYG 642
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDY-ATVKTLLEYNADCSAKDNEGKTPLDH 161
A + + + TPLHL+ + Y ++K LL A+ + D +G +P+ +
Sbjct: 643 ANVNSLNIDEQTPLHLA-----SKKGYEESIKILLSNEANPNLIDLDGISPIGY 691
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
M +T LH +A N E++ L V + A++ + +TP+H A N E+ + L++
Sbjct: 353 MGKTYLHQAAESNVPEMINELCSHG----VNVNARDNFRKTPIHYATINNHKESVQALIS 408
Query: 107 HGAFIEAK-ANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
GA + AK G TPLH Y+I + + ++ L+ + A ++ D + T L H++
Sbjct: 409 CGAKVNAKDYYYGKTPLH----YAIENNNIQIIQLLISHGASVNSNDIDFNTTL-HIAAE 463
Query: 166 PGSAKLRELLL 176
+ K+ ELL+
Sbjct: 464 RNNTKIAELLI 474
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMY-GETPLHMAAKNGCNEAAKLLLAH 107
+TP+H + N E V++L+ ++ A++ Y G+TPLH A +N + +LL++H
Sbjct: 388 KTPIHYATINNHKESVQALISCGA----KVNAKDYYYGKTPLHYAIENNNIQIIQLLISH 443
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
GA + + + T LH++ + + L+ + +AK+ +G+ PL + S
Sbjct: 444 GASVNSNDIDFNTTLHIAA----ERNNTKIAELLISLGVNVNAKNKDGQIPLHYAS 495
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 53/89 (59%), Gaps = 16/89 (17%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N +++ L+ + N + + N+ +TPLH+A+K G E+ K+LL++
Sbjct: 621 TPLHIAANNNCIDVINVLISYGAN----VNSLNIDEQTPLHLASKKGYEESIKILLSN-- 674
Query: 110 FIEAKAN----NGMTPLHLSVWYSIRSED 134
EA N +G++P + Y+I+S++
Sbjct: 675 --EANPNLIDLDGISP----IGYAIQSKN 697
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ ++ G+T LH AA++ E L +HG + A+ N TP+H Y+ +
Sbjct: 346 DFNVKDEMGKTYLHQAAESNVPEMINELCSHGVNVNARDNFRKTPIH----YATINNHKE 401
Query: 137 TVKTLLEYNADCSAKD-NEGKTPLDHLSNGPGSAKLRELLLWH 178
+V+ L+ A +AKD GKTPL H + + ++ +LL+ H
Sbjct: 402 SVQALISCGAKVNAKDYYYGKTPL-HYAIENNNIQIIQLLISH 443
>gi|1814195|gb|AAB41826.1| AO49 ankyrin [Caenorhabditis elegans]
Length = 1815
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH++A+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLSAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+ AKANNG+T +HL ED+ V +L N A+ ++K N G TPL
Sbjct: 681 DVGAKANNGLTAMHLCA-----QEDHVPVAQILYNNGAEINSKTNAGYTPL 726
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVILLLQAGANSNATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 538 EVAGILLDHNADK 550
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DSKGKVRLPA-LHIAAKKDDTTAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LLE N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLEKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 17 IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+H ++ G+L + LL R P + +N V TPLHV+A YN ++ LLE + K
Sbjct: 561 LHLASKYGNLEVVRLLLERGTPVDIEGKNQV---TPLHVAAHYNNDKVAMLLLENGASAK 617
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
A+N Y TPLH+AAK E A LL A AK+ G TPLHLS E +
Sbjct: 618 AA--AKNGY--TPLHIAAKKNQMEIASTLLQFKADPNAKSRAGFTPLHLSA-----QEGH 668
Query: 136 ATVKTLL-EYNADCSAKDNEGKTPL 159
+ LL E +D AK N G T +
Sbjct: 669 KEISGLLIENGSDVGAKANNGLTAM 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH++A + E+ LL+ DK L + G TPLH+A+K G E +LLL G
Sbjct: 526 SPLHIAAKEGQEEVAGILLDH-NADKTLLTKK---GFTPLHLASKYGNLEVVRLLLERGT 581
Query: 110 FIEAKANNGMTPLHLSVWYS------IRSEDYATVK-----------------------T 140
++ + N +TPLH++ Y+ + E+ A+ K T
Sbjct: 582 PVDIEGKNQVTPLHVAAHYNNDKVAMLLLENGASAKAAAKNGYTPLHIAAKKNQMEIAST 641
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ AD +AK G TPL HLS G ++ LL+
Sbjct: 642 LLQFKADPNAKSRAGFTPL-HLSAQEGHKEISGLLI 676
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R+ A+ A++GDL LLR + +N N LH+++ +E+V+ L++
Sbjct: 30 RAEGSASFLRAARAGDLEKVLELLRAG-TDINTSN-ANGLNSLHLASKEGHSEVVRELIK 87
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ +++A G T LH+A+ G + +L+ +GA + ++ NG TPL+++
Sbjct: 88 R----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYMAA--- 140
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ VK LL++ A+ + +G TPL
Sbjct: 141 -QENHEEVVKYLLKHGANQALSTEDGFTPL 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L N + +N + TPLHV+ + + +VK L+E +
Sbjct: 693 MHLCAQE-DHVPVAQILYNNGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVE----NGA 746
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
++ + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ E K LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEEVVKYLLKHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D T TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDSKGKVRLPALHIAAKKDDTTAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSKS--GFTPL-HIAAHYGHENVGQLLL 247
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L N+ E+ ++ G TPLH+A G K L+ +GA
Sbjct: 691 TAMHLCAQEDHVPVAQILY----NNGAEINSKTNAGYTPLHVACHFGQLNMVKFLVENGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|71981389|ref|NP_001021266.1| Protein UNC-44, isoform a [Caenorhabditis elegans]
gi|351065812|emb|CCD61793.1| Protein UNC-44, isoform a [Caenorhabditis elegans]
Length = 2039
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH++A+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLSAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+ AKANNG+T +HL ED+ V +L N A+ ++K N G TPL
Sbjct: 681 DVGAKANNGLTAMHLCAQ-----EDHVPVAQILYNNGAEINSKTNAGYTPL 726
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVILLLQAGANSNATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 538 EVAGILLDHNADK 550
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DSKGKVRLPA-LHIAAKKDDTTAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LLE N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLEKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 17 IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+H ++ G+L + LL R P + +N V TPLHV+A YN ++ LLE + K
Sbjct: 561 LHLASKYGNLEVVRLLLERGTPVDIEGKNQV---TPLHVAAHYNNDKVAMLLLENGASAK 617
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
A+N Y TPLH+AAK E A LL A AK+ G TPLHLS E +
Sbjct: 618 AA--AKNGY--TPLHIAAKKNQMEIASTLLQFKADPNAKSRAGFTPLHLSAQ-----EGH 668
Query: 136 ATVKTLL-EYNADCSAKDNEGKTPL 159
+ LL E +D AK N G T +
Sbjct: 669 KEISGLLIENGSDVGAKANNGLTAM 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH++A + E+ LL+ DK L + G TPLH+A+K G E +LLL G
Sbjct: 526 SPLHIAAKEGQEEVAGILLDH-NADKTLLTKK---GFTPLHLASKYGNLEVVRLLLERGT 581
Query: 110 FIEAKANNGMTPLHLSVWYS------IRSEDYATVK-----------------------T 140
++ + N +TPLH++ Y+ + E+ A+ K T
Sbjct: 582 PVDIEGKNQVTPLHVAAHYNNDKVAMLLLENGASAKAAAKNGYTPLHIAAKKNQMEIAST 641
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ AD +AK G TPL HLS G ++ LL+
Sbjct: 642 LLQFKADPNAKSRAGFTPL-HLSAQEGHKEISGLLI 676
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R+ A+ A++GDL LLR + +N N LH+++ +E+V+ L++
Sbjct: 30 RAEGSASFLRAARAGDLEKVLELLRAG-TDINTSN-ANGLNSLHLASKEGHSEVVRELIK 87
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ +++A G T LH+A+ G + +L+ +GA + ++ NG TPL+++
Sbjct: 88 R----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYMAA--- 140
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ VK LL++ A+ + +G TPL
Sbjct: 141 -QENHEEVVKYLLKHGANQALSTEDGFTPL 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L N + +N + TPLHV+ + + +VK L+E +
Sbjct: 693 MHLCAQE-DHVPVAQILYNNGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVE----NGA 746
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
++ + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ E K LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEEVVKYLLKHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D T TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDSKGKVRLPALHIAAKKDDTTAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSK--SGFTPL-HIAAHYGHENVGQLLL 247
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L N+ E+ ++ G TPLH+A G K L+ +GA
Sbjct: 691 TAMHLCAQEDHVPVAQILY----NNGAEINSKTNAGYTPLHVACHFGQLNMVKFLVENGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|428303574|ref|YP_007113023.1| AAA ATPase [Calothrix sp. PCC 6303]
gi|428238779|gb|AFZ04567.1| AAA ATPase central domain protein [Calothrix sp. PCC 6303]
Length = 848
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL-KVGAR 241
++R + + K + +L +L N++GL +K ++ + ++R KA G
Sbjct: 568 KEREISQQGVKDKDNLQQLRQKLDNMIGLLNVKQRVNELINTERANQRLKAEGYDSFSTL 627
Query: 242 RPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
H+ FLGNPGTGKT VARI+G + +G+L EV +DLV E+VG T PK ++
Sbjct: 628 ETRHLLFLGNPGTGKTTVARIVGEIFKALGLLKKGHFVEVGYSDLVAEYVGQTAPKIKKV 687
Query: 302 V 302
+
Sbjct: 688 I 688
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
Query: 168 SAKLRELLLWHS----------EEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQ 217
+A+ R+L W+ E RK++ L +K ++ L+ ++GL +K
Sbjct: 268 AAENRQLNYWYDCFAIAKEISLAEARKQKWLSGNVSSKPGLERLQK----MIGLQSVKEV 323
Query: 218 LRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGRLLYMVGILPT 275
+++ A+ + ++ R+ GL PP H+ F GNPGTGKT VAR++G + +G+L
Sbjct: 324 VKQRAEVLKVENIRQQQGLFT---EPPRLHLVFKGNPGTGKTTVARLIGEIYRDLGLLRR 380
Query: 276 DRVTEVQRTDLVGEFVGHTGPKT 298
V EV R DLV ++G T KT
Sbjct: 381 GHVVEVARQDLVAGYLGQTAMKT 403
>gi|255557701|ref|XP_002519880.1| ankyrin repeat-containing protein, putative [Ricinus communis]
gi|223540926|gb|EEF42484.1| ankyrin repeat-containing protein, putative [Ricinus communis]
Length = 249
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+SGDL A Q +L NP +N R+ ++TPLH++A +V L + K
Sbjct: 18 LHAAARSGDLNAVQSILSLNPLAVNSRDK-HSRTPLHLAAWSGHVHVVNYLSQQ----KA 72
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A M +H AA+ G + + LL+ G ++A G+TPLH Y+ + +
Sbjct: 73 DVSAAAMDDMGAIHFAAQKGHLDVVRTLLSSGVSVKATTRKGLTPLH----YAAQGSNLD 128
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSN 164
VK L++ A + K GKTPLD SN
Sbjct: 129 LVKYLVKKGASLATKTKAGKTPLDLASN 156
>gi|335424086|ref|ZP_08553102.1| CbbX protein [Salinisphaera shabanensis E1L3A]
gi|335424426|ref|ZP_08553435.1| CbbX protein [Salinisphaera shabanensis E1L3A]
gi|334889111|gb|EGM27403.1| CbbX protein [Salinisphaera shabanensis E1L3A]
gi|334890374|gb|EGM28644.1| CbbX protein [Salinisphaera shabanensis E1L3A]
Length = 313
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFL 249
S+ + D+L+ +L VGL +K ++R+ A +L+D R+ L A P HM F
Sbjct: 31 SQIQEVFDQLDRDL---VGLTPVKTRIREIAALLLVDHVRRQFDL---ASDTPTLHMCFT 84
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GNPGTGKT VA + ++L+ + + + V R DLVG+++GHT PKT+
Sbjct: 85 GNPGTGKTTVAERMAQILHKLEYVREGHLVSVTRDDLVGQYIGHTAPKTK 134
>gi|345490474|ref|XP_003426386.1| PREDICTED: ankyrin-3-like [Nasonia vitripennis]
Length = 1462
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 88/177 (49%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ N+ P + TPLH++A Y
Sbjct: 183 DSKGKVRLPA-LHIAAKKDDCKAADLLLQ------NDHKPDVTSKSGFTPLHIAAHYGNE 235
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+I + L++ G D L N+ +PLH+AAK G N K+LL GA I+AK +G+TP
Sbjct: 236 DIARLLIKR-GADVNYLAKHNI---SPLHVAAKWGKNNMVKILLESGAVIDAKTRDGLTP 291
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V TLLE +A SA+ G PL S G R +LL+H
Sbjct: 292 LHCAA----RSGHEQCVSTLLENSAPISARTKNGLAPLHMASQGDHVDAAR-VLLYH 343
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH++A N+ +I +LLE VE +A G TPLH++A+ G + LL+ HG
Sbjct: 619 QTPLHIAARKNQMDIASTLLEHGAKANVESKA----GFTPLHLSAQKGHYDMTNLLIEHG 674
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLSNGPG 167
A KA NG+T LHL ED+ V ++L N A+ ++ G P+ H++ G
Sbjct: 675 ADPNHKAKNGLTALHLCA-----QEDFIRVASILVKNGANVESETETGYRPI-HVAAHFG 728
Query: 168 SAKLRELLLWHSEE 181
+ + LL HS E
Sbjct: 729 NLSMIRFLLKHSAE 742
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH+++ +IV LL+ V+ ++MY T LH+AAK G E A +L+ +
Sbjct: 487 QTPLHIASRLGNVDIVMLLLQHGA--AVDTTTKDMY--TALHIAAKEGQEEVAAILVDNN 542
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A ++A NG TPLH++ Y + K LL+ ++ A+ TPL
Sbjct: 543 ASVKATTKNGFTPLHVAAKYG----NMNVAKILLQKDSKLDAQGKNDITPL 589
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 15 ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGND 74
A +H +Q GD + R+L + + ++E + T LHV+A + K LL+
Sbjct: 323 APLHMASQ-GDHVDAARVLLYHRAPVDEVT-IDYLTSLHVAAHCGHVRVAKLLLDR---- 376
Query: 75 KVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSED 134
K + A+ + G TPLH+A K + +LLL HGA IE+ +G+TPLH++ + +
Sbjct: 377 KADPNARALNGFTPLHIACKKNRIKVVELLLKHGASIESTTESGLTPLHVASFMGCMN-- 434
Query: 135 YATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V LL++ A+ G+TPL HL+ + +LL
Sbjct: 435 --IVIFLLQHEANPDVPTVRGETPL-HLAARANQTDIIRILL 473
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNE-RNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+H A+ G++ + LL+++ L + +N + TPL ++ Y+ + + LLE +
Sbjct: 556 LHVAAKYGNMNVAKILLQKDSKLDAQGKNDI---TPLLLACHYDHPNVAQLLLEKGASP- 611
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
L +QN G+TPLH+AA+ + A LL HGA ++ G TPLHLS + Y
Sbjct: 612 -HLASQN--GQTPLHIAARKNQMDIASTLLEHGAKANVESKAGFTPLHLSA----QKGHY 664
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
L+E+ AD + K G T L
Sbjct: 665 DMTNLLIEHGADPNHKAKNGLTAL 688
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 39/178 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A + E+ L++ + ++A G TPLH+AAK G AK+LL +
Sbjct: 521 TALHIAAKEGQEEVAAILVD----NNASVKATTKNGFTPLHVAAKYGNMNVAKILLQKDS 576
Query: 110 FIEAKANNGMTPLHLSVWY-----------------------------SIRSEDYATVKT 140
++A+ N +TPL L+ Y + R T
Sbjct: 577 KLDAQGKNDITPLLLACHYDHPNVAQLLLEKGASPHLASQNGQTPLHIAARKNQMDIAST 636
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR-----RALEACSE 193
LLE+ A + + G TPL HLS G + LL+ H + + AL C++
Sbjct: 637 LLEHGAKANVESKAGFTPL-HLSAQKGHYDMTNLLIEHGADPNHKAKNGLTALHLCAQ 693
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A + V +LLE + + A+ G PLHMA++ +AA++LL H A
Sbjct: 290 TPLHCAARSGHEQCVSTLLE----NSAPISARTKNGLAPLHMASQGDHVDAARVLLYHRA 345
Query: 110 FIEAKANNGMTPLHLSVWYS-IRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
++ + +T LH++ +R K LL+ AD +A+ G TPL H++
Sbjct: 346 PVDEVTIDYLTSLHVAAHCGHVR-----VAKLLLDRKADPNARALNGFTPL-HIACKKNR 399
Query: 169 AKLRELLLWH 178
K+ ELLL H
Sbjct: 400 IKVVELLLKH 409
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 10/105 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV++ IV LL+ N V + GETPLH+AA+ + ++LL +GA
Sbjct: 422 TPLHVASFMGCMNIVIFLLQHEANPDVP----TVRGETPLHLAARANQTDIIRILLRNGA 477
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA--DCSAKD 152
++A+A TPLH++ R + V LL++ A D + KD
Sbjct: 478 KVDARAREQQTPLHIAS----RLGNVDIVMLLLQHGAAVDTTTKD 518
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ EIV LL+ +++A G T LH+A+ G +E +L+ +GA +
Sbjct: 65 LHLASKDGHVEIVTELLKR----GAKVDAATKKGNTALHIASLAGQSEIVNILIQYGAAV 120
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
++ NG TPL+++ + VK LL A+ S +G TPL
Sbjct: 121 NIQSQNGFTPLYMAA----QENHDQVVKILLNNGANQSLATEDGFTPL 164
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++EIV L+++ V +++QN G TPL+MAA+ ++ K+LL +GA
Sbjct: 96 TALHIASLAGQSEIVNILIQYGA--AVNIQSQN--GFTPLYMAAQENHDQVVKILLNNGA 151
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT--PLDHLSNGPG 167
+G TPL +++ + D V LLE D++GK P H++
Sbjct: 152 NQSLATEDGFTPLAVAMQ---QGHD-KVVSVLLE-------NDSKGKVRLPALHIAAKKD 200
Query: 168 SAKLRELLL 176
K +LLL
Sbjct: 201 DCKAADLLL 209
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+ A + + L++ N +E++ G P+H+AA G + LL H A
Sbjct: 686 TALHLCAQEDFIRVASILVKNGAN----VESETETGYRPIHVAAHFGNLSMIRFLLKHSA 741
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
I+ K TPLH + + V L+E NA A+ N+G T L+
Sbjct: 742 EIDVKTKQNYTPLHQAA----QQGHAHIVSALIEGNASHRARTNDGLTALN 788
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+++ N G LH+A+K+G E LL GA ++A G T LH++ +SE
Sbjct: 52 LDINTANSNGLNALHLASKDGHVEIVTELLKRGAKVDAATKKGNTALHIASLAG-QSE-- 108
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
V L++Y A + + G TPL
Sbjct: 109 -IVNILIQYGAAVNIQSQNGFTPL 131
>gi|123409803|ref|XP_001303515.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121884901|gb|EAX90585.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 185
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 9/144 (6%)
Query: 43 RNPVMAQTPLHVSAGYNKA-EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAA 101
R TPLH A +K ++VK L+E N + + G TPLH+AA NGC +
Sbjct: 14 RKNFFNNTPLHEIARDDKNLDLVKFLIEHGANVNATDDDE---GSTPLHIAATNGCKKMI 70
Query: 102 KLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
+LL++HG I +K +G T LH W +I ++ A + L+ A+ +AKD+EG TPL H
Sbjct: 71 RLLISHGVDINSKDRDGKTCLH---WAAINNK-KAMAEFLISLGANVNAKDSEGLTPL-H 125
Query: 162 LSNGPGSAKLRELLLWHSEEQRKR 185
L+ S K+ + L+ H + + +
Sbjct: 126 LATMNNSTKVAKCLIAHGADIKAK 149
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ L + L E+ + +N + TPLH++A ++++ L+ V
Sbjct: 23 LHEIARDDKNLDLVKFLIEHGANVNATDDDEGSTPLHIAATNGCKKMIRLLISHG----V 78
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ +++ G+T LH AA N A+ L++ GA + AK + G+TPLHL+ +
Sbjct: 79 DINSKDRDGKTCLHWAAINNKKAMAEFLISLGANVNAKDSEGLTPLHLATM----NNSTK 134
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQR 183
K L+ + AD AK++ GKTPL S K+ ++L+ + ++R
Sbjct: 135 VAKCLIAHGADIKAKNDYGKTPL-FCSRKFKRPKMADILIENGAKKR 180
>gi|374992050|ref|YP_004967545.1| sporulation protein K-like protein [Streptomyces bingchenggensis
BCW-1]
gi|297162702|gb|ADI12414.1| sporulation protein K-like protein [Streptomyces bingchenggensis
BCW-1]
Length = 812
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 551 GELDALVGLESVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTTVARL 609
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 610 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 646
>gi|123482337|ref|XP_001323756.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121906627|gb|EAY11533.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 597
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 20/158 (12%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDKVEL 78
C+Q +L +F L + N+ N +P H+S SLLE+ + ++
Sbjct: 263 CSQYNNLQSFLVYLDQ----TNDINTCFVYSPNFHLS----------SLLEYLISKGADI 308
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
A+N G TPLH AAKN E A++L+++GA I AK +G PLH Y+ R+ T
Sbjct: 309 NAKNEEGCTPLHYAAKNNNKETAEILISNGADINAKNEDGCIPLH----YAARNNSKETA 364
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ L+ AD +AKD EG TPL H + + + E L+
Sbjct: 365 EILISNGADINAKDKEGFTPL-HYAATFNNKETAEFLI 401
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+N G PLH AA+N E A++L+++GA
Sbjct: 317 TPLHYAAKNNNKETAEILIS----NGADINAKNEDGCIPLHYAARNNSKETAEILISNGA 372
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK G TPLH + ++ + T + L+ AD +AK+ EG+ PL H + S
Sbjct: 373 DINAKDKEGFTPLHYAATFNNKE----TAEFLISNGADINAKNEEGRIPL-HYAARNNSK 427
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 428 ETAEILI 434
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A +N E + L+ + ++ A+N G PLH AA+N E A++L+++GA
Sbjct: 383 TPLHYAATFNNKETAEFLIS----NGADINAKNEEGRIPLHYAARNNSKETAEILISNGA 438
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I AK +G TPLH + ++ + T + L+ AD +AKD +G T L
Sbjct: 439 DINAKDIDGSTPLHWAATFNNKE----TAEFLISNGADINAKDKDGFTLL 484
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH +A +N E + L+ + ++ A++ G TPLH AA+ E ++L+++GA
Sbjct: 482 TLLHDAATFNNKETAEFLIS----NGADINAKDKDGFTPLHYAARYNNKEMVEILISNGA 537
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
I K +G TPLH Y+ R+ V+ L+ AD +AKD +G TP
Sbjct: 538 DINTKTKDGFTPLH----YAARNNSKEMVEILISNGADINAKDKDGCTP 582
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
L N + +N +N + PLH +A N E + L+ + ++ A+++ G TPLH
Sbjct: 398 EFLISNGADINAKNE-EGRIPLHYAARNNSKETAEILIS----NGADINAKDIDGSTPLH 452
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA E A+ L+++GA I AK +G T LH + ++ + T + L+ AD +A
Sbjct: 453 WAATFNNKETAEFLISNGADINAKDKDGFTLLHDAATFNNKE----TAEFLISNGADINA 508
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD +G TPL H + + ++ E+L+
Sbjct: 509 KDKDGFTPL-HYAARYNNKEMVEILI 533
>gi|404213443|ref|YP_006667637.1| ATPases of the AAA+ class [Gordonia sp. KTR9]
gi|403644242|gb|AFR47482.1| ATPases of the AAA+ class [Gordonia sp. KTR9]
Length = 593
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 190 ACSETKAKM-DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
A S+T++ + E + EL+ +GL +K Q+ K L + R GL AR H+AF
Sbjct: 292 ADSDTQSSLVTEAQRELAEQIGLDSVKQQVAKLQSTATLAKVRADRGLSTSAR-SLHLAF 350
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
G PGTGKT VARI+ ++ +G + +D+V E R D+VGE +G T KT
Sbjct: 351 TGPPGTGKTTVARIVAKIYCGLGFIKSDKVVEATRRDMVGEHLGSTAIKT 400
>gi|420913732|ref|ZP_15377042.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0125-S]
gi|420919339|ref|ZP_15382640.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-S]
gi|420924629|ref|ZP_15387922.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-1108]
gi|420980509|ref|ZP_15443683.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-R]
gi|392125831|gb|EIU51583.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0125-S]
gi|392138562|gb|EIU64298.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-S]
gi|392148956|gb|EIU74673.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-1108]
gi|392177508|gb|EIV03163.1| type VII secretion AAA-ATPase EccA [Mycobacterium abscessus
6G-0728-R]
Length = 647
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
K+ E EL VG+++LK Q+R + + + E+R+ LGLK A HM F+G PGTGK
Sbjct: 296 KLAEATAELDAQVGMYDLKEQVRTFRSRIRMAEKRRKLGLKTPAA-ANHMIFIGPPGTGK 354
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
T VA ++ ++L +GI+ T V V L+G +G + KT V L +
Sbjct: 355 TTVANVIAKILCGLGIVKTSNVVSVSAKQLIGTHLGESEAKTEAYVAKALDGV 407
>gi|123450529|ref|XP_001313747.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121895641|gb|EAY00818.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 733
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QT LH +A N EI + L+ N + A+N G+TPLH A+ N C E LL+ G
Sbjct: 455 QTALHFAAERNNVEITELLILHDAN----VNAKNKDGKTPLHYASINNCQEVGNLLILKG 510
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
++++AK NG TPLH Y+ ++ V+ L+ AD KD E KTPL H + G+
Sbjct: 511 SYLDAKDKNGRTPLH----YAAYAKKKEFVEILIASRADIDIKDIENKTPL-HYAVENGN 565
Query: 169 AKLRELLL 176
+ ++L+
Sbjct: 566 IETAQILI 573
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 91/174 (52%), Gaps = 17/174 (9%)
Query: 3 KNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAE 62
KN+D ++ A+I+ C + G+LL + S L+ ++ +TPLH +A K E
Sbjct: 483 KNKDGKT-PLHYASINNCQEVGNLLILK------GSYLDAKDK-NGRTPLHYAAYAKKKE 534
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
V+ L+ + +++ +++ +TPLH A +NG E A++L++ GA AK G PL
Sbjct: 535 FVEILIA----SRADIDIKDIENKTPLHYAVENGNIETAQILISTGANTNAKDKYGKAPL 590
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
H Y+ ++ + K LL +AKD G TPL H++ GS + + L+
Sbjct: 591 H----YAAKNNNIEIAKILLAQRGRINAKDICGNTPL-HIAAINGSIGVIKFLI 639
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N D++ + K +H A+ DL L+ + ++ N ++ V+ +T LH + +N +
Sbjct: 346 NLDKQKENGK-TFLHQAAERNDLELINELISQGANM-NAKD-VLGKTALHYATIHNHIDS 402
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
V++LL KV L+ + YG+TPLH A N + KLL HGA + N T LH
Sbjct: 403 VQALLSRGA--KVCLK-DHYYGKTPLHYAVDNNNIKIIKLLFTHGANANSYDINFQTALH 459
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
++ + + L+ ++A+ +AK+ +GKTPL + S
Sbjct: 460 ----FAAERNNVEITELLILHDANVNAKNKDGKTPLHYAS 495
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH + E + L+ N A++ YG+ PLH AAKN E AK+LLA
Sbjct: 554 KTPLHYAVENGNIETAQILISTGANT----NAKDKYGKAPLHYAAKNNNIEIAKILLAQR 609
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
I AK G TPLH++ + +K L++ A ++ + +TPL H ++ G
Sbjct: 610 GRINAKDICGNTPLHIAAI----NGSIGVIKFLIDNGARVNSLNILDQTPL-HFASMVGY 664
Query: 169 AKLRELLLWHSEEQR--KRRALEACSETKAKMD 199
+ ++LL + R+ + S K M+
Sbjct: 665 IESIKILLSYKANPNLIDRKGISPISYAKQNMN 697
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
L+E + L+ Q G+T LH AA+ E L++ GA + AK G T LH
Sbjct: 336 LIELIASIGANLDKQKENGKTFLHQAAERNDLELINELISQGANMNAKDVLGKTALH--- 392
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDN-EGKTPLDHLSNGPGSAKLRELLLWH 178
Y+ +V+ LL A KD+ GKTPL H + + K+ +LL H
Sbjct: 393 -YATIHNHIDSVQALLSRGAKVCLKDHYYGKTPL-HYAVDNNNIKIIKLLFTH 443
>gi|123427509|ref|XP_001307268.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121888887|gb|EAX94338.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 337
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH +A N ++ LL N ++ +N G+T H+AA N C E + LL+HG
Sbjct: 195 NTPLHDAACENSKVTIEFLLSHGAN----IKEKNNDGKTAFHLAALNNCKETVEFLLSHG 250
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K N+G T HL+ + + TV+ LL + A+ + KDN+GKT L H + S
Sbjct: 251 ANIREKDNDGKTAFHLAALNNSKE----TVEFLLSHGANINEKDNDGKTAL-HFTVDHNS 305
Query: 169 AKLRELLLWH 178
+ E LL H
Sbjct: 306 KETAEFLLSH 315
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++ YN EI + L+ + + + + G TPLH AAK+ E A+LL++HGA
Sbjct: 97 TALHIATMYNCKEIAEFLISRG----ININEKKIKGSTPLHDAAKSNNKEMAELLISHGA 152
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I K + T LH + Y+ + + L+ + + KD G TPL H + S
Sbjct: 153 NINEKDDKKRTALHDAARYNSKE----MAELLISLGLNINEKDRRGNTPL-HDAACENSK 207
Query: 170 KLRELLLWHSEEQRKRR----------ALEACSET 194
E LL H +++ AL C ET
Sbjct: 208 VTIEFLLSHGANIKEKNNDGKTAFHLAALNNCKET 242
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T H++A N E V+ LL N + ++ G+T LH + E A+ LL+HG
Sbjct: 261 KTAFHLAALNNSKETVEFLLSHGAN----INEKDNDGKTALHFTVDHNSKETAEFLLSHG 316
Query: 109 AFIEAKANNGMTPLHLS 125
I K+ G T LH +
Sbjct: 317 ININEKSKYGETALHYA 333
>gi|790608|gb|AAA85854.1| UNC-44, partial [Caenorhabditis elegans]
Length = 1786
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH++A+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLSAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+ AKANNG+T +HL ED+ V +L N A+ ++K N G TPL
Sbjct: 681 DVGAKANNGLTAMHLCA-----QEDHVPVAQILYNNGAEINSKTNAGYTPL 726
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVILLLQAGANSNATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 538 EVAGILLDHNADK 550
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DSKGKVRLPA-LHIAAKKDDTTAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LLE N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLEKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 17 IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+H ++ G+L + LL R P + +N V TPLHV+A YN ++ LLE + K
Sbjct: 561 LHLASKYGNLEVVRLLLERGTPVDIEGKNQV---TPLHVAAHYNNDKVAMLLLENGASAK 617
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
A+N Y TPLH+AAK E A LL A AK+ G TPLHLS E +
Sbjct: 618 AA--AKNGY--TPLHIAAKKNQMEIASTLLQFKADPNAKSRAGFTPLHLSA-----QEGH 668
Query: 136 ATVKTLL-EYNADCSAKDNEGKTPL 159
+ LL E +D AK N G T +
Sbjct: 669 KEISGLLIENGSDVGAKANNGLTAM 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH++A + E+ LL+ DK L + G TPLH+A+K G E +LLL G
Sbjct: 526 SPLHIAAKEGQEEVAGILLDH-NADKTLLTKK---GFTPLHLASKYGNLEVVRLLLERGT 581
Query: 110 FIEAKANNGMTPLHLSVWYS------IRSEDYATVK-----------------------T 140
++ + N +TPLH++ Y+ + E+ A+ K T
Sbjct: 582 PVDIEGKNQVTPLHVAAHYNNDKVAMLLLENGASAKAAAKNGYTPLHIAAKKNQMEIAST 641
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ AD +AK G TPL HLS G ++ LL+
Sbjct: 642 LLQFKADPNAKSRAGFTPL-HLSAQEGHKEISGLLI 676
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R+ A+ A++GDL LLR + +N N LH+++ +E+V+ L++
Sbjct: 30 RAEGSASFLRAARAGDLEKVLELLRAG-TDINTSN-ANGLNSLHLASKEGHSEVVRELIK 87
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ +++A G T LH+A+ G + +L+ +GA + ++ NG TPL+++
Sbjct: 88 R----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYMAA--- 140
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ VK LL++ A+ + +G TPL
Sbjct: 141 -QENHEEVVKYLLKHGANQALSTEDGFTPL 169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L N + +N + TPLHV+ + + +VK L+E +
Sbjct: 693 MHLCAQE-DHVPVAQILYNNGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVE----NGA 746
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
++ + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ E K LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEEVVKYLLKHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D T TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDSKGKVRLPALHIAAKKDDTTAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSK--SGFTPL-HIAAHYGHENVGQLLL 247
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L N+ E+ ++ G TPLH+A G K L+ +GA
Sbjct: 691 TAMHLCAQEDHVPVAQILY----NNGAEINSKTNAGYTPLHVACHFGQLNMVKFLVENGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|350269075|ref|YP_004880383.1| putative stage V sporulation protein K [Oscillibacter valericigenes
Sjm18-20]
gi|348593917|dbj|BAK97877.1| putative stage V sporulation protein K [Oscillibacter valericigenes
Sjm18-20]
Length = 415
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPH 245
+A E + K+++L+ EL +GL +K +++ + + + RK GL H
Sbjct: 82 KAPEQTAPPPEKIEDLQLELEGYIGLTAIKKEVKNLINMVTVYQLRKEHGLPT-TDLSLH 140
Query: 246 MAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHL 305
M F GNPGTGKT VAR++ R+ + +GIL ++ EV R+ LV +VG T KT R V
Sbjct: 141 MVFSGNPGTGKTTVARLMARIYHSLGILSKGQLVEVDRSGLVAGYVGQTAIKTTRVVNSA 200
Query: 306 L 306
L
Sbjct: 201 L 201
>gi|17542700|ref|NP_500898.1| Protein UNC-44, isoform c [Caenorhabditis elegans]
gi|1814197|gb|AAB41828.1| AO66 ankyrin [Caenorhabditis elegans]
gi|351065814|emb|CCD61795.1| Protein UNC-44, isoform c [Caenorhabditis elegans]
Length = 1867
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH++A+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLSAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+ AKANNG+T +HL ED+ V +L N A+ ++K N G TPL
Sbjct: 681 DVGAKANNGLTAMHLCAQ-----EDHVPVAQILYNNGAEINSKTNAGYTPL 726
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DSKGKVRLPA-LHIAAKKDDTTAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LLE N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLEKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVILLLQAGANSNATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 538 EVAGILLDHNADK 550
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 17 IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+H ++ G+L + LL R P + +N V TPLHV+A YN ++ LLE + K
Sbjct: 561 LHLASKYGNLEVVRLLLERGTPVDIEGKNQV---TPLHVAAHYNNDKVAMLLLENGASAK 617
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
A+N Y TPLH+AAK E A LL A AK+ G TPLHLS E +
Sbjct: 618 AA--AKNGY--TPLHIAAKKNQMEIASTLLQFKADPNAKSRAGFTPLHLSAQ-----EGH 668
Query: 136 ATVKTLL-EYNADCSAKDNEGKTPL 159
+ LL E +D AK N G T +
Sbjct: 669 KEISGLLIENGSDVGAKANNGLTAM 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH++A + E+ LL+ DK L + G TPLH+A+K G E +LLL G
Sbjct: 526 SPLHIAAKEGQEEVAGILLDH-NADKTLLTKK---GFTPLHLASKYGNLEVVRLLLERGT 581
Query: 110 FIEAKANNGMTPLHLSVWYS------IRSEDYATVK-----------------------T 140
++ + N +TPLH++ Y+ + E+ A+ K T
Sbjct: 582 PVDIEGKNQVTPLHVAAHYNNDKVAMLLLENGASAKAAAKNGYTPLHIAAKKNQMEIAST 641
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ AD +AK G TPL HLS G ++ LL+
Sbjct: 642 LLQFKADPNAKSRAGFTPL-HLSAQEGHKEISGLLI 676
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L N + +N + TPLHV+ + + +VK L+E +
Sbjct: 693 MHLCAQE-DHVPVAQILYNNGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVE----NGA 746
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
++ + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R+ A+ A++GDL LLR + +N N LH+++ +E+V+ L++
Sbjct: 30 RAEGSASFLRAARAGDLEKVLELLRAG-TDINTSN-ANGLNSLHLASKEGHSEVVRELIK 87
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ +++A G T LH+A+ G + +L+ +GA + ++ NG TPL+++
Sbjct: 88 R----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYMAA--- 140
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ VK LL++ A+ + +G TPL
Sbjct: 141 -QENHEEVVKYLLKHGANQALSTEDGFTPL 169
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ E K LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEEVVKYLLKHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D T TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDSKGKVRLPALHIAAKKDDTTAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSKS--GFTPL-HIAAHYGHENVGQLLL 247
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L N+ E+ ++ G TPLH+A G K L+ +GA
Sbjct: 691 TAMHLCAQEDHVPVAQILY----NNGAEINSKTNAGYTPLHVACHFGQLNMVKFLVENGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|321272302|gb|ADW80187.1| ankyrin repeat protein [Wolbachia endosymbiont wVitA of Nasonia
vitripennis phage WOVitA1]
Length = 2474
Score = 74.7 bits (182), Expect = 5e-11, Method: Composition-based stats.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 8 RSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKS 66
R++ AT +H A+SG + L++ + ++ N + TPLHV+A +I++
Sbjct: 1184 RAKDKNNATPLHYAAESGHKAVAELLIKNGVEINDKANNNL--TPLHVAALKGYKDIIEL 1241
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
L+ +K E+ AQ++ G TPLH AA NG + LL+ + A ++A+ N+GMTPLH S
Sbjct: 1242 LIR----NKAEVRAQDIKGSTPLHAAAMNGSKDVIDLLIKNKAEVDARTNDGMTPLH-SA 1296
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ R + V L++ A+ +AK N G TPL
Sbjct: 1297 ALNGRGD---AVVFLIKNKAEVNAKANYGLTPL 1326
Score = 67.8 bits (164), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 39 LLNERNPVMAQ----TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAK 94
L N+ N +A TPLH + +IV +LLE V + A++ TPLH AA+
Sbjct: 1144 LTNKANASIATVEGITPLHFAVQSGHLKIVVALLE----HGVNIRAKDKNNATPLHYAAE 1199
Query: 95 NGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE 154
+G A+LL+ +G I KANN +TPLH++ + ++ L+ A+ A+D +
Sbjct: 1200 SGHKAVAELLIKNGVEINDKANNNLTPLHVAALKGYKD----IIELLIRNKAEVRAQDIK 1255
Query: 155 GKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
G TPL H + GS + +LL+ + E R
Sbjct: 1256 GSTPL-HAAAMNGSKDVIDLLIKNKAEVDAR 1285
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/132 (35%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
+ TPLH +A +++ L++ +K E++A+ G TPLH AA NG +A L+
Sbjct: 1254 IKGSTPLHAAAMNGSKDVIDLLIK----NKAEVDARTNDGMTPLHSAALNGRGDAVVFLI 1309
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLSN 164
+ A + AKAN G+TPLH +V ED+ V LL N A +A+ G TPL H++
Sbjct: 1310 KNKAEVNAKANYGLTPLHAAV-----VEDHKDVVNLLIKNKAKVNAEGIAGSTPL-HVAV 1363
Query: 165 GPGSAKLRELLL 176
G ++ E+L+
Sbjct: 1364 EAGHKEIVEILV 1375
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 1 MQKNQDRRSRSAKP-ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
++K D +RS T+H A+ L + +L +N + N ++ + Q+PL ++A +
Sbjct: 877 LKKGADINARSINLWTTLHFAAKGPSLEIVKFVLNQNLDV-NVKD-INGQSPLQIAAAHG 934
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
+ IVK + G + ++ + +G+TPLH+AA+NG + ++LL + A + +G+
Sbjct: 935 RKNIVKFFV---GEAGLYVDDADNHGKTPLHIAAQNGHKDTVEVLLKNKASTVTQDMSGL 991
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGK-TPLDHLSNGPGSAKLRELLLWH 178
+PL +Y+IR+ K LLE + + + G TPL H + G +L LL +
Sbjct: 992 SPL----YYAIRNNHVNVAKVLLEKDTNVDINEAMGGFTPL-HEAAESGHLELVNFLLQN 1046
Query: 179 SEEQRKR 185
+ R
Sbjct: 1047 KADVNAR 1053
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 19/181 (10%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRE----NPSLLNERNPVMAQTPLHVS 55
+Q D +R+ + T +H A +G L L+ + N S++N TPLH +
Sbjct: 1044 LQNKADVNARNDRDWTPLHAAAFNGHLEIVNALILKGANVNASVIN------GCTPLHYA 1097
Query: 56 AGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKA 115
+I LL+ + V Y TPLH AAK+G + K LL + A
Sbjct: 1098 IENGHEKIANILLKHGAHVNV---VDKTYNNTPLHYAAKDGHEKIVKALLTNKANASIAT 1154
Query: 116 NNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 175
G+TPLH ++++S V LLE+ + AKD TPL H + G + ELL
Sbjct: 1155 VEGITPLH----FAVQSGHLKIVVALLEHGVNIRAKDKNNATPL-HYAAESGHKAVAELL 1209
Query: 176 L 176
+
Sbjct: 1210 I 1210
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ + E+VK L++ N + A+N G P+H+AA+ G + + L+ G
Sbjct: 1584 TILHIASQESNLEMVKCLVDEGSN----INAKNASGSKPIHIAAREGYKDTVEFFLSKGL 1639
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I T LH Y+ VK L+ AD +AKD G TP+ H++ G
Sbjct: 1640 SINELGTANQTLLH----YAAMKGRLEVVKYLIAQGADVNAKDTNGLTPM-HIAANFGYK 1694
Query: 170 KLRELLL-----WHSEEQRKRRALEACSE 193
+ E+LL +++ ++ RR LE ++
Sbjct: 1695 DVIEVLLKNGAVYNAVDKLCRRPLEMTND 1723
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A E+V LL+ +K ++ A+N TPLH AA NG E L+ GA
Sbjct: 1026 TPLHEAAESGHLELVNFLLQ----NKADVNARNDRDWTPLHAAAFNGHLEIVNALILKGA 1081
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE-GKTPLDHLSNGPGS 168
+ A NG TPLH Y+I + LL++ A + D TPL H + G
Sbjct: 1082 NVNASVINGCTPLH----YAIENGHEKIANILLKHGAHVNVVDKTYNNTPL-HYAAKDGH 1136
Query: 169 AKLRELLL 176
K+ + LL
Sbjct: 1137 EKIVKALL 1144
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 10/162 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H AQ+G + LL+ S + + + +PL+ + N + K LLE N +
Sbjct: 961 LHIAAQNGHKDTVEVLLKNKASTVTQ--DMSGLSPLYYAIRNNHVNVAKVLLEKDTNVDI 1018
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ M G TPLH AA++G E LL + A + A+ + TPLH + + +
Sbjct: 1019 N---EAMGGFTPLHEAAESGHLELVNFLLQNKADVNARNDRDWTPLHAAAF----NGHLE 1071
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
V L+ A+ +A G TPL H + G K+ +LL H
Sbjct: 1072 IVNALILKGANVNASVINGCTPL-HYAIENGHEKIANILLKH 1112
Score = 50.8 bits (120), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 64/110 (58%), Gaps = 12/110 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + + ++V L++ +K ++ A+ + G TPLH+A + G E ++L+A+GA
Sbjct: 1324 TPLHAAVVEDHKDVVNLLIK----NKAKVNAEGIAGSTPLHVAVEAGHKEIVEILVANGA 1379
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K+NN +TPL ++ Y+ + V+ L+ A+ ++ + EG PL
Sbjct: 1380 NVNVKSNN-LTPLLSAIKYNHKE----IVEVLI---ANGASVNVEGGEPL 1421
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +Q +L + L+ E S +N +N P+H++A + V+ L G
Sbjct: 1586 LHIASQESNLEMVKCLVDEG-SNINAKN-ASGSKPIHIAAREGYKDTVEFFLS-KGLSIN 1642
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
EL N +T LH AA G E K L+A GA + AK NG+TP+H++ + +
Sbjct: 1643 ELGTAN---QTLLHYAAMKGRLEVVKYLIAQGADVNAKDTNGLTPMHIAANFGYKD---- 1695
Query: 137 TVKTLLEYNADCSAKDNEGKTPLD 160
++ LL+ A +A D + PL+
Sbjct: 1696 VIEVLLKNGAVYNAVDKLCRRPLE 1719
Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVE--LEAQNMY-GETPLHMAAKNGCNEAAKLL 104
TPLH + EIV+ LL+ DK+ + A+ G T LH+AAK G E K L
Sbjct: 2301 GNTPLHTATSKCYKEIVEVLLQHISRDKLNDFVNAKTTSSGTTSLHVAAKGGSLEVVKSL 2360
Query: 105 LAHGAFIEAKANNGMTPLHLS--------------VWYSIRSEDYATVKTLL-----EYN 145
L HGA + + G P+ LS ++ I++ + ++ L E+
Sbjct: 2361 LKHGAIYKIENKEGKIPIDLSKDQRVTNLLKLIEELFRDIKNGNVESISKLRAVKPDEFL 2420
Query: 146 ADCSAKDNEGKTPLD-HLSNGPG--SAKLRELL 175
A +A++N+G T L ++NG + KL E+L
Sbjct: 2421 AITNARNNQGNTLLQVAIANGHKNVAGKLLEML 2453
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 19/144 (13%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
L V AGY +IV+ LL +K + + T LH+AAK G E L+ GA +
Sbjct: 1423 LAVLAGYR--DIVEILLR----NKAYVNTKGPENTTLLHLAAKRGHKEIVNALITKGANV 1476
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
+A NG TPL+L+ E + + +TL+ AD + + EG PL H++ G G
Sbjct: 1477 DAMTINGTTPLYLAA-----QEGHGEIAETLIANRADVNIVNVEG-APL-HIAAGHGHDN 1529
Query: 171 LRELLLWHS-----EEQRKRRALE 189
+ E+LL + ++ + R +LE
Sbjct: 1530 VVEVLLSNGAKTNVKDNKSRTSLE 1553
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL+++A EI ++L+ ++ ++ N+ G PLH+AA +G + ++LL++GA
Sbjct: 1485 TPLYLAAQEGHGEIAETLIA----NRADVNIVNVEG-APLHIAAGHGHDNVVEVLLSNGA 1539
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY-NADCSAKDNEGKTPL 159
K N T L L+V + VK LL+Y D +AK N+ T L
Sbjct: 1540 KTNVKDNKSRTSLELAVSHG----HLQVVKMLLQYKKVDMNAKGNDDWTIL 1586
Score = 44.3 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
Q ++++A V+ LL+ D + +++ G TPLH A NG + +LL +G
Sbjct: 2236 QKDINIAASKGDIRTVQRLLK----DGADANDKDIDGRTPLHYAVSNGHIDIVNILLTNG 2291
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY------NADCSAKDNEGKTPLDHL 162
A + N G TPLH + + V+ LL++ N +AK T H+
Sbjct: 2292 ANVSQVTNKGNTPLHTATSKCYKE----IVEVLLQHISRDKLNDFVNAKTTSSGTTSLHV 2347
Query: 163 SNGPGSAKLRELLLWH 178
+ GS ++ + LL H
Sbjct: 2348 AAKGGSLEVVKSLLKH 2363
Score = 43.1 bits (100), Expect = 0.18, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
+ A+N TPL+ AA G + +LL + A N G TPLH Y+ +
Sbjct: 1758 VNAKNADSVTPLYYAAWKGYDGVVNILLQNKANPNVVGNKGFTPLH----YAAKFSHLKV 1813
Query: 138 VKTLLEYNADCSAKDNEGKTPLD 160
VK LL A +A + GKTP D
Sbjct: 1814 VKALLSNGAVYNAVSDSGKTPSD 1836
Score = 40.4 bits (93), Expect = 1.0, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 11 SAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE- 69
+A +H A G L + L+ + + N ++ TP+H++A + ++++ LL+
Sbjct: 1646 TANQTLLHYAAMKGRLEVVKYLIAQGADV-NAKD-TNGLTPMHIAANFGYKDVIEVLLKN 1703
Query: 70 ---WPGNDKV---ELEAQN-------MYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKAN 116
+ DK+ LE N + L A K + + + GAF+ AK
Sbjct: 1704 GAVYNAVDKLCRRPLEMTNDKDVINLLASTEKLFEAVKRNSSSEVENYIKAGAFVNAKNA 1763
Query: 117 NGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
+ +TPL+ + W + D V LL+ A+ + N+G TPL +
Sbjct: 1764 DSVTPLYYAAW---KGYD-GVVNILLQNKANPNVVGNKGFTPLHY 1804
Score = 38.5 bits (88), Expect = 4.4, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL +N + +N + TPLHV+ EIV+ L+ N V +++ N+ TPL
Sbjct: 1340 LLIKNKAKVNAEG-IAGSTPLHVAVEAGHKEIVEILVANGAN--VNVKSNNL---TPLLS 1393
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
A K E ++L+A+GA + + G PL L+V R V+ LL A + K
Sbjct: 1394 AIKYNHKEIVEVLIANGASVNVE---GGEPLLLAVLAGYRD----IVEILLRNKAYVNTK 1446
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
E T L HL+ G ++ L+
Sbjct: 1447 GPENTTLL-HLAAKRGHKEIVNALI 1470
Score = 37.7 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL+ +A +V LL+ N V G TPLH AAK + K LL++GA
Sbjct: 1767 TPLYYAAWKGYDGVVNILLQNKANPNV----VGNKGFTPLHYAAKFSHLKVVKALLSNGA 1822
Query: 110 FIEAKANNGMTPLHLSVWYSIRS 132
A +++G TP +V SI S
Sbjct: 1823 VYNAVSDSGKTPSDFTVDKSITS 1845
>gi|25145251|ref|NP_741409.1| Protein UNC-44, isoform e [Caenorhabditis elegans]
gi|351065816|emb|CCD61797.1| Protein UNC-44, isoform e [Caenorhabditis elegans]
Length = 1841
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH++A+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLSAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+ AKANNG+T +HL ED+ V +L N A+ ++K N G TPL
Sbjct: 681 DVGAKANNGLTAMHLCA-----QEDHVPVAQILYNNGAEINSKTNAGYTPL 726
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVILLLQAGANSNATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 538 EVAGILLDHNADK 550
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DSKGKVRLPA-LHIAAKKDDTTAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LLE N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLEKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 17 IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+H ++ G+L + LL R P + +N V TPLHV+A YN ++ LLE + K
Sbjct: 561 LHLASKYGNLEVVRLLLERGTPVDIEGKNQV---TPLHVAAHYNNDKVAMLLLENGASAK 617
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
A+N Y TPLH+AAK E A LL A AK+ G TPLHLS E +
Sbjct: 618 AA--AKNGY--TPLHIAAKKNQMEIASTLLQFKADPNAKSRAGFTPLHLSA-----QEGH 668
Query: 136 ATVKTLL-EYNADCSAKDNEGKTPL 159
+ LL E +D AK N G T +
Sbjct: 669 KEISGLLIENGSDVGAKANNGLTAM 693
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH++A + E+ LL+ DK L + G TPLH+A+K G E +LLL G
Sbjct: 526 SPLHIAAKEGQEEVAGILLDH-NADKTLLTKK---GFTPLHLASKYGNLEVVRLLLERGT 581
Query: 110 FIEAKANNGMTPLHLSVWYS------IRSEDYATVK-----------------------T 140
++ + N +TPLH++ Y+ + E+ A+ K T
Sbjct: 582 PVDIEGKNQVTPLHVAAHYNNDKVAMLLLENGASAKAAAKNGYTPLHIAAKKNQMEIAST 641
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ AD +AK G TPL HLS G ++ LL+
Sbjct: 642 LLQFKADPNAKSRAGFTPL-HLSAQEGHKEISGLLI 676
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L N + +N + TPLHV+ + + +VK L+E +
Sbjct: 693 MHLCAQE-DHVPVAQILYNNGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVE----NGA 746
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
++ + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R+ A+ A++GDL LLR + +N N LH+++ +E+V+ L++
Sbjct: 30 RAEGSASFLRAARAGDLEKVLELLRAG-TDINTSN-ANGLNSLHLASKEGHSEVVRELIK 87
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ +++A G T LH+A+ G + +L+ +GA + ++ NG TPL+++
Sbjct: 88 R----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYMAA--- 140
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ VK LL++ A+ + +G TPL
Sbjct: 141 -QENHEEVVKYLLKHGANQALSTEDGFTPL 169
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ E K LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEEVVKYLLKHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D T TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDSKGKVRLPALHIAAKKDDTTAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSKS--GFTPL-HIAAHYGHENVGQLLL 247
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L N+ E+ ++ G TPLH+A G K L+ +GA
Sbjct: 691 TAMHLCAQEDHVPVAQILY----NNGAEINSKTNAGYTPLHVACHFGQLNMVKFLVENGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|296167585|ref|ZP_06849910.1| AAA family ATPase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295897128|gb|EFG76739.1| AAA family ATPase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 619
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F G PGTGKT +
Sbjct: 324 EAELQLAEFIGLDEVKNQVARLKSSVAMELVRKQRGLAV-AQRAHHLVFAGPPGTGKTTI 382
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + + EV R DL+G+ +G T KT + L + L
Sbjct: 383 ARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 435
>gi|302549438|ref|ZP_07301780.1| sporulation protein K [Streptomyces viridochromogenes DSM 40736]
gi|302467056|gb|EFL30149.1| sporulation protein K [Streptomyces viridochromogenes DSM 40736]
Length = 578
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 147 DCSAKDNEG-------KTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSETKAKMD 199
DC++ ++ G +T + +S+ P + L L +E + A+E + D
Sbjct: 257 DCTSDESTGLRAPAARETAVQTVSHSP--SLLGALPGPRAEAEPPAPAVEPEQPARTSKD 314
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
L EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT V
Sbjct: 315 VL-GELDALVGLDSVKREVRALTDMIEVGRRRRQAGLKAASVKR-HLVFTGSPGTGKTTV 372
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 373 ARLYGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 412
>gi|443629650|ref|ZP_21113970.1| hypothetical protein STVIR_7875 [Streptomyces viridochromogenes
Tue57]
gi|443336843|gb|ELS51165.1| hypothetical protein STVIR_7875 [Streptomyces viridochromogenes
Tue57]
Length = 746
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 187 ALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHM 246
A E + T+ D L EL +VGL +K ++R + + RR+ GLK + + H+
Sbjct: 470 AAEPETPTRTSKDVL-GELDALVGLESVKREVRALTDMIEVGRRRQQAGLKAASVKR-HL 527
Query: 247 AFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
F G+PGTGKT VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 528 VFTGSPGTGKTTVARLYGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 580
>gi|374984673|ref|YP_004960168.1| hypothetical protein SBI_01916 [Streptomyces bingchenggensis BCW-1]
gi|297155325|gb|ADI05037.1| hypothetical protein SBI_01916 [Streptomyces bingchenggensis BCW-1]
Length = 1103
Score = 74.7 bits (182), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+EL ++GL +K Q+R L +RR+ LG+ V + H+ F G PGTGKT VAR+
Sbjct: 560 DELEALIGLDGVKHQVRTLVNLNQLSQRRQRLGMPVPSMSR-HLVFAGPPGTGKTTVARL 618
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
G +L +G+LP+ + EV R DLV + +G T KT
Sbjct: 619 YGSILAQLGVLPSGHLVEVSRADLVAQVIGGTAIKT 654
Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +VGL +K ++ + ++R+A GL R H+ F G PGTGKT VAR+
Sbjct: 839 LEAMVGLGAVKREVTDLVSLLTTVKQREAAGLP-APRISQHLVFSGPPGTGKTTVARLYA 897
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
LL+ +G+LP ++ EV R DLVG +VGHT T+
Sbjct: 898 GLLHSLGVLPRGQLVEVARADLVGRYVGHTAQLTK 932
>gi|302517914|ref|ZP_07270256.1| stage V sporulation protein K [Streptomyces sp. SPB78]
gi|302426809|gb|EFK98624.1| stage V sporulation protein K [Streptomyces sp. SPB78]
Length = 434
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILG 264
+VGL +K Q+R + + + R GL V +PP H F G GTGKT VARILG
Sbjct: 151 QMVGLEPVKRQVRALSAQLNMARLRAEQGLPV---QPPKRHFIFSGPSGTGKTTVARILG 207
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
R+ Y +G+L D + E QR+DLVGE++G T K + L +
Sbjct: 208 RVFYALGLLGGDHLVEAQRSDLVGEYLGQTAVKANELIDSALGGV 252
>gi|357414952|ref|YP_004926688.1| ATPase AAA [Streptomyces flavogriseus ATCC 33331]
gi|320012321|gb|ADW07171.1| AAA ATPase central domain protein [Streptomyces flavogriseus ATCC
33331]
Length = 811
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 550 GELDALVGLDSVKREVRALTDMIEVGRRRRLAGLKAASVRR-HLVFTGSPGTGKTTVARL 608
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 609 YGEILASLGVLEHGHLVEVSRVDLVGEHIGSTAIRTQ 645
>gi|390565928|ref|ZP_10246489.1| probable RuBisCo-expression protein CbbX [Nitrolancetus hollandicus
Lb]
gi|390170823|emb|CCF85829.1| probable RuBisCo-expression protein CbbX [Nitrolancetus hollandicus
Lb]
Length = 326
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
S + +D L+ +L + L +K ++R+ A +L+D R+ +GL + RP HM+F G
Sbjct: 43 SNVEEVLDALDRDL---IALVPVKTRIREIAALLLVDRLRRDVGLD--SDRPSLHMSFTG 97
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VA + +L+ +G + + V R DLVG+++GHT PKTR
Sbjct: 98 PPGTGKTTVAMRMAEILHRLGYVAKGHLVTVTRDDLVGQYIGHTAPKTR 146
>gi|123484171|ref|XP_001324205.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121907084|gb|EAY11982.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 701
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A YNKAE + LL N ++ ++ G T LH+AA N C E ++LL+HG
Sbjct: 577 KTALHTAAEYNKAETAEVLLSHGAN----IDEKDNDGRTALHLAAYNKCKEIVEVLLSHG 632
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K G T LHL+ Y+ R E + LL + AD + KDN+G+T L H + +
Sbjct: 633 ANINEKDKYGRTALHLAA-YNNRKE---AAELLLSHGADINEKDNDGRTAL-HYAAKYYN 687
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 688 EETAEVLISH 697
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N T L ++A N E + LL N + ++ G+T LH AA+ E
Sbjct: 536 INEKNN-DGYTTLLLAAKNNSKETAEVLLLHGAN----IHEKDEDGKTALHTAAEYNKAE 590
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++LL+HGA I+ K N+G T LHL+ + + V+ LL + A+ + KD G+T L
Sbjct: 591 TAEVLLSHGANIDEKDNDGRTALHLAAYNKCKE----IVEVLLSHGANINEKDKYGRTAL 646
Query: 160 DHLSNGPGSAKLRELLLWH 178
HL+ + ELLL H
Sbjct: 647 -HLAAYNNRKEAAELLLSH 664
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ + QT L ++ N EI + L+ N +++ G T LH+AAKN E
Sbjct: 305 INEKD-ICGQTVLRIAVDRNYKEISELLITHGANINEKIDC----GRTALHIAAKNNNKE 359
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+LL++HGA I K NN + LH + + +++ A V L+ + A+ + K+N+G T L
Sbjct: 360 IVELLISHGANINEKDNNKDSALHTATI--LNNKEIAEV--LISHGANINEKNNDGYTTL 415
Query: 160 DHLSNGPGSAKLRELLLWH 178
L+ + ++ ELL+ H
Sbjct: 416 -LLAAKNNNKEIVELLISH 433
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+ LH + N EI + L+ N + +N G T L +AAKN E +LL++HG
Sbjct: 445 DSALHTATILNNKEIAEVLISHGAN----INEKNNDGYTTLLLAAKNNNKEIVELLISHG 500
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K NN + LH + + +++ A V L+ + A+ + K+N+G T L L+ S
Sbjct: 501 ANINEKDNNKDSALHTATI--LNNKEIAEV--LISHGANINEKNNDGYTTL-LLAAKNNS 555
Query: 169 AKLRELLLWH 178
+ E+LL H
Sbjct: 556 KETAEVLLLH 565
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+ LH + N EI + L+ N + +N G T L +AAKN E +LL++HG
Sbjct: 379 DSALHTATILNNKEIAEVLISHGAN----INEKNNDGYTTLLLAAKNNNKEIVELLISHG 434
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K NN + LH + + +++ A V L+ + A+ + K+N+G T L L+ +
Sbjct: 435 ANINEKDNNKDSALHTATI--LNNKEIAEV--LISHGANINEKNNDGYTTL-LLAAKNNN 489
Query: 169 AKLRELLLWH 178
++ ELL+ H
Sbjct: 490 KEIVELLISH 499
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ S E+ + + +++ G+T L +A E ++LL+ HGA I K + G T LH
Sbjct: 291 IPSFCEYFLSHGANINEKDICGQTVLRIAVDRNYKEISELLITHGANINEKIDCGRTALH 350
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++ ++ + V+ L+ + A+ + KDN + L H + + ++ E+L+ H
Sbjct: 351 IAA----KNNNKEIVELLISHGANINEKDNNKDSAL-HTATILNNKEIAEVLISH 400
>gi|123487291|ref|XP_001324909.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121907800|gb|EAY12686.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 673
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A +N E + L+ N + A++ G TPLH A+ + E +LL+ HGA
Sbjct: 549 TPLHLAAYHNNKETAEILILHGAN----VNAKDSKGHTPLHSASSHNSKETTELLILHGA 604
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I A++ + +TPLH++ Y+ + T + L+ + A+ +AKD++G TPL H++ S
Sbjct: 605 EINAQSQDEVTPLHIAAHYNSKE----TAELLILHGANVNAKDSKGHTPL-HIAAHHNSK 659
Query: 170 KLRELLLWH 178
+ ELL+ H
Sbjct: 660 ETTELLILH 668
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 34/161 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A +N E + L+ N L A++ G TPLH+AA + E A LL+ HGA
Sbjct: 450 TPLHIAAYHNSKETAELLILHGAN----LNAKDSKGHTPLHIAAHHNNKETAALLILHGA 505
Query: 110 FIEAKANNGMTPLHLS----------------VWYSIRSEDYA-------------TVKT 140
I A++ + +TPLH++ V + +S+D T +
Sbjct: 506 NINAQSQDEVTPLHIAALHNSKETAELLILHGVEINAQSQDEVTPLHLAAYHNNKETAEI 565
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
L+ + A+ +AKD++G TPL H ++ S + ELL+ H E
Sbjct: 566 LILHGANVNAKDSKGHTPL-HSASSHNSKETTELLILHGAE 605
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CA + L+ + ++ N PLH++ N + L+ N
Sbjct: 386 LHYCANCNSKETAELLILHGAEINSKNNK--GDIPLHIATHKNNRVFAQLLILHGAN--- 440
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ AQ+ TPLH+AA + E A+LL+ HGA + AK + G TPLH++ ++ +
Sbjct: 441 -INAQSQDEVTPLHIAAYHNSKETAELLILHGANLNAKDSKGHTPLHIAAHHNNKE---- 495
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
T L+ + A+ +A+ + TPL H++ S + ELL+ H E
Sbjct: 496 TAALLILHGANINAQSQDEVTPL-HIAALHNSKETAELLILHGVE 539
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+S + EI LL G V + +++ G TPLH AA N+ A+ ++ HGA I
Sbjct: 320 LHISTLNDNQEI-SELLILNG---VTVNSKDKSGRTPLHYAAIKNYNKTAECMILHGANI 375
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
A+ + G T LH Y T + L+ + A+ ++K+N+G PL H++ +
Sbjct: 376 NAQCDGGSTALH----YCANCNSKETAELLILHGAEINSKNNKGDIPL-HIATHKNNRVF 430
Query: 172 RELLLWH 178
+LL+ H
Sbjct: 431 AQLLILH 437
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A YN E + L+ N + A++ G TPLH+AA + E +LL+ HGA
Sbjct: 615 TPLHIAAHYNSKETAELLILHGAN----VNAKDSKGHTPLHIAAHHNSKETTELLILHGA 670
Query: 110 FI 111
I
Sbjct: 671 LI 672
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
L+E+ + V++ ++ +G LH++ N E ++LL+ +G + +K +G TPLH
Sbjct: 298 LVEYFISAGVDINIKDSHGRCALHISTLNDNQEISELLILNGVTVNSKDKSGRTPLH--- 354
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ +I++ + T + ++ + A+ +A+ + G T L + +N S + ELL+ H E
Sbjct: 355 YAAIKNYN-KTAECMILHGANINAQCDGGSTALHYCANC-NSKETAELLILHGAE 407
>gi|344998105|ref|YP_004800959.1| AAA ATPase central domain-containing protein [Streptomyces sp.
SirexAA-E]
gi|344313731|gb|AEN08419.1| AAA ATPase central domain protein [Streptomyces sp. SirexAA-E]
Length = 821
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 560 GELDALVGLESVKREVRALTDMIEVGRRRQLAGLKAASVRR-HLVFTGSPGTGKTTVARL 618
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 619 YGEILAALGVLEHGHLVEVSRVDLVGEHIGSTAIRTQ 655
>gi|169823651|ref|YP_001691154.1| hypothetical protein FMG_P0137 [Finegoldia magna ATCC 29328]
gi|167832271|dbj|BAG09186.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length = 513
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 1/102 (0%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALG-LKVGARRPPHMAFLGNPGTGKTMVA 260
E L++++GL E+K Q+ + ++ + K LG ++ + HM F G PGTGKT VA
Sbjct: 249 EETLNSLIGLGEVKTQIETFKNRIMFQNKMKQLGNDQLTSGFNNHMIFYGEPGTGKTTVA 308
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
RI+ LLY +GI +R +V L E+VG T PK ++ +
Sbjct: 309 RIIAGLLYKLGITRKNRCVQVNGESLKAEYVGQTAPKVQKVI 350
>gi|393768604|ref|ZP_10357141.1| ATPase central domain-containing protein, partial [Methylobacterium
sp. GXF4]
gi|392726047|gb|EIZ83375.1| ATPase central domain-containing protein, partial [Methylobacterium
sp. GXF4]
Length = 504
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 198 MDELEN---ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
MDE L ++GL +K Q++ +L+D +R+A G++VGA HM F G PG
Sbjct: 373 MDEARKVIARLDAMIGLAPVKQQVKTVVARVLVDAKRRAEGIEVGAVSQ-HMVFTGPPGV 431
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
GKT VARI+G + +G+L V EV R LV +VG T +T R L I +
Sbjct: 432 GKTEVARIMGDIFKALGVLRKGHVVEVDRAGLVAGYVGQTATRTLERCKEALDGIMFI 489
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 176 LWHSEEQRKRRALEACSETKA--KMDELENELSNI---VGLHELKIQLRKWAKGMLLDER 230
L + RK R ++ + A K D L L+ + VGL +K++++ M ++++
Sbjct: 72 LDQARASRKIRPIQFVDDGAAVEKKDLLATALATLDGMVGLAPVKLEVKGVIARMQVEQQ 131
Query: 231 RKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEF 290
R+A L V A HM F G PG GKT VAR+LG + + +L + EV R LV +
Sbjct: 132 RRAQNLPVAAMSQ-HMVFTGPPGVGKTEVARVLGTVFKALKVLRKGHLVEVDRAGLVAGY 190
Query: 291 VGHTGPKTRRRVGHLLSEITCL 312
G T KT R L I +
Sbjct: 191 AGQTAIKTLERCKEALDGILFI 212
>gi|322695791|gb|EFY87593.1| AAA family ATPase, putative [Metarhizium acridum CQMa 102]
Length = 2123
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%)
Query: 232 KALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFV 291
K LG+ + P + F G PGTGKTM AR G+L Y +G L V E +DL+G++V
Sbjct: 1707 KTLGMDINEEIPFNFLFRGPPGTGKTMTARKFGKLYYDMGFLSKAEVVECSASDLIGQYV 1766
Query: 292 GHTGPKTRRRVGHLLSEI 309
GHTGPK ++ + + L ++
Sbjct: 1767 GHTGPKVQKVLNNALGKV 1784
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+ ++GL E+K +++ + + +R+ L + + F+G+PGTGKT VA++ G
Sbjct: 1406 LNEMIGLAEVKQEVKILLDSLTTNYQRE-LDEEPLMSFSLNRVFIGSPGTGKTTVAKLYG 1464
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
++L +G+L V D +G +G + +T+
Sbjct: 1465 KILASLGMLSNGEVIVKTPADFIGSVLGQSEAQTK 1499
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
+E N+L +++GL +K + K + + R+ L L + + LGNPGTGKT
Sbjct: 1125 NEALNKLMDLIGLETVKEEFLA-VKSNIDTKIRQELSL---SEERLSCSLLGNPGTGKTT 1180
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDL 286
VAR+ L G LP D E + L
Sbjct: 1181 VARLWAEFLACTGALPGDGFKETSGSKL 1208
>gi|448925426|gb|AGE49006.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus AP110A]
Length = 292
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++A L+ + + E +P A TPLH + A+I++ LL+
Sbjct: 5 LHEAVRNDDVVAVLALIAQEADVTAE-DP-YAHTPLHFA---KNADIIRVLLK----HGA 55
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 56 HVDATNIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D + L+E+ AD +AKD++G TPL
Sbjct: 111 --ASDGDVARMLIEHGADINAKDSDGCTPL 138
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 18/141 (12%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A GD+ R+L E+ + +N ++ TPL+ + NK + LL G+D + A
Sbjct: 111 ASDGDV---ARMLIEHGADINAKDS-DGCTPLYWAG--NKC--IARLLTAHGSD---VSA 159
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
++ +G TPLH A + G + A++LL H + A+ +G TPLH++ S R Y V+
Sbjct: 160 KDRHGYTPLHHA-RTG--DIARVLLEHEVDVNARGYDGCTPLHVA---SRRGRPY-VVRV 212
Query: 141 LLEYNADCSAKDNEGKTPLDH 161
LLE+ AD AKDN+G+TP +H
Sbjct: 213 LLEHGADIRAKDNDGRTPFEH 233
>gi|407473977|ref|YP_006788377.1| stage V sporulation protein K [Clostridium acidurici 9a]
gi|407050485|gb|AFS78530.1| stage V sporulation protein K [Clostridium acidurici 9a]
Length = 319
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 177 WHSEEQRKRRALEA--CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKAL 234
++ + + K + +E K K+ + E +++GL +K L K + + +R++
Sbjct: 29 YYDKNESKVKTMEKSKIDIEKEKLKSITLEFDSLIGLTNVK-SLVKEIQAFIEIQRKREN 87
Query: 235 GLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
+ HM F GNPGTGKT VARI+G++ +G+L + E++R +LVGE++GHT
Sbjct: 88 EQLIAEPVVLHMIFRGNPGTGKTTVARIIGKMFKEMGLLKNGHLVEIERANLVGEYIGHT 147
Query: 295 GPKTRRRVGHLLSEITCL 312
K ++ + L I +
Sbjct: 148 AGKVKKEIKRALGGILFI 165
>gi|318059520|ref|ZP_07978243.1| sporulation protein K-like protein [Streptomyces sp. SA3_actG]
gi|318080840|ref|ZP_07988172.1| sporulation protein K-like protein [Streptomyces sp. SA3_actF]
gi|333022626|ref|ZP_08450690.1| putative sporulation protein K-like protein [Streptomyces sp.
Tu6071]
gi|332742478|gb|EGJ72919.1| putative sporulation protein K-like protein [Streptomyces sp.
Tu6071]
Length = 815
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +VGL +K ++R + + RR+A GLK + R H+ F G+PGTGKT VAR+
Sbjct: 556 LDALVGLDSVKREVRAMTDMIEVGRRRQAAGLKAASARR-HLVFTGSPGTGKTTVARLYA 614
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVG 303
+L +G+L + EV R DLVGE +G T +T+ G
Sbjct: 615 EILVALGVLEKGHLVEVSRVDLVGEHIGSTAIRTQEAFG 653
>gi|302523479|ref|ZP_07275821.1| sporulation protein K [Streptomyces sp. SPB78]
gi|302432374|gb|EFL04190.1| sporulation protein K [Streptomyces sp. SPB78]
Length = 818
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L +VGL +K ++R + + RR+A GLK + R H+ F G+PGTGKT VAR+
Sbjct: 559 LDALVGLDSVKREVRAMTDMIEVGRRRQAAGLKAASARR-HLVFTGSPGTGKTTVARLYA 617
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVG 303
+L +G+L + EV R DLVGE +G T +T+ G
Sbjct: 618 EILVALGVLEKGHLVEVSRVDLVGEHIGSTAIRTQEAFG 656
>gi|219109858|ref|XP_002176682.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411217|gb|EEC51145.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 505
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
++D+L+ EL VGL +K ++++ A ++LD+ R+ LG + A HM F G PGTGK
Sbjct: 219 QLDKLDREL---VGLVPVKKRVKEIASLLVLDKMRRKLGFET-AVPSLHMCFTGAPGTGK 274
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VA +G++L +G V R DLVG++VGHT PKT+ +
Sbjct: 275 TTVAVRMGQILAKMGYSRKGHVVLATRDDLVGQYVGHTAPKTKEMI 320
>gi|395770872|ref|ZP_10451387.1| putative sporulation protein K-like protein [Streptomyces
acidiscabies 84-104]
Length = 814
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 147 DCSAKDNEG----KTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACS-----ETKAK 197
DC++ ++ G TP + +A LL EQR A E E KA
Sbjct: 489 DCTSDESGGARTPTTPAGAFAPAVQTAAHTPGLLSALPEQRPVVAAELSVSERTMEIKAP 548
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
D L EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT
Sbjct: 549 KDVL-GELDALVGLDSVKREVRALIDMIEVGRRRQRAGLKAASVKR-HLVFTGSPGTGKT 606
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L + +L + EV R DLVGE +G T +T+
Sbjct: 607 TVARLYGEILAALDVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 648
>gi|207099799|emb|CAQ52952.1| CD4-specific ankyrin repeat protein D6.1 [synthetic construct]
Length = 169
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N ++ +TPLH++A EIV+ LL+ ++ AQ+ YG TPLH
Sbjct: 31 RILMANGADVNAKDD-EGRTPLHLAAREGHLEIVEVLLKHGA----DVNAQDWYGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL + A + A ++G TPLHL+ Y+ V+ LL+ AD +A
Sbjct: 86 LAAAWGHLEIVEVLLKNVADVNAMDDDGSTPLHLAAHYA----HLEVVEVLLKNGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTTFD-ISIDNGNEDLAEIL 165
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + AK + G TPLHL+ R V+ LL++ AD +A+
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDDEGRTPLHLAA----REGHLEIVEVLLKHGADVNAQ 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G TPL HL+ G ++ E+LL
Sbjct: 77 DWYGSTPL-HLAAAWGHLEIVEVLL 100
>gi|344281353|ref|XP_003412444.1| PREDICTED: ankyrin-1 [Loxodonta africana]
Length = 1707
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+++ +V+ LL+W K E E + G TPLH AA+NG +++LL HGA
Sbjct: 207 TPLHIASRRGNVNMVRLLLDW----KAEKETRTKDGLTPLHCAARNGHVHISEILLDHGA 262
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I+AK NG++P+H++ + + V+ LL+YNA+ + TPL H++ G
Sbjct: 263 TIQAKTKNGLSPIHMAA----QGDHLDCVRLLLQYNAEIDDITLDHLTPL-HVAAHCGHH 317
Query: 170 KLRELLL 176
++ ++LL
Sbjct: 318 RVAKVLL 324
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A E+V+ LL N + N G TPLH+AA+ G A LL+ HGA
Sbjct: 601 TPLHLAAQEGHTEMVELLLSKQANSNL----GNKSGLTPLHLAAQEGHVPVATLLIDHGA 656
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
++A G TPLH++ Y + VK LL+ A+ +AK G TPL
Sbjct: 657 TVDAATRMGYTPLHVACHYG----NIKLVKFLLQKKANVNAKTKNGATPL 702
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 11/128 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ E+ SLL++ + A+++ G TPLH+AA+ G E +LLL+ A
Sbjct: 568 TPLHIAAKQNQMEVACSLLQYGAS----ANAESLQGVTPLHLAAQEGHTEMVELLLSKQA 623
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL-EYNADCSAKDNEGKTPLDHLSNGPGS 168
+G+TPLHL+ E + V TLL ++ A A G TPL H++ G+
Sbjct: 624 NSNLGNKSGLTPLHLAA-----QEGHVPVATLLIDHGATVDAATRMGYTPL-HVACHYGN 677
Query: 169 AKLRELLL 176
KL + LL
Sbjct: 678 IKLVKFLL 685
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV++ IVK+LL+ + V + N+ ETPLHMAA+ G E A+ LL + A
Sbjct: 372 TPLHVASFMGHLSIVKNLLQRGASPNV---SSNVKVETPLHMAARAGHIEVAEYLLQNKA 428
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ KA + TPLH + R VK LL+ NA+ + G TPL H++ G
Sbjct: 429 KVNGKAKDDQTPLHCAA----RVGHANMVKLLLDNNANPNLATTAGHTPL-HIAAREGHV 483
Query: 170 KLRELLLWHSEEQRKRRALEACSETK 195
+ LL ++RA +AC K
Sbjct: 484 ETVLTLL-------EKRASQACMTKK 502
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 10/162 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H + G L + LL+ S N + V +TPLH++A E+ + LL+ +K
Sbjct: 374 LHVASFMGHLSIVKNLLQRGASP-NVSSNVKVETPLHMAARAGHIEVAEYLLQ----NKA 428
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ + +TPLH AA+ G KLLL + A G TPLH++ R
Sbjct: 429 KVNGKAKDDQTPLHCAARVGHANMVKLLLDNNANPNLATTAGHTPLHIAA----REGHVE 484
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
TV TLLE A + +G TPL H++ G ++ ELLL H
Sbjct: 485 TVLTLLEKRASQACMTKKGFTPL-HVAAKYGKVRVAELLLEH 525
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++ +N +IVK LL P A N Y TPLH+AAK E A LL +GA
Sbjct: 535 TPLHLAVHHNNLDIVKLLL--PRGSSPHSPALNGY--TPLHIAAKQNQMEVACSLLQYGA 590
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
A++ G+TPLHL+ + V+ LL A+ + + G TPL HL+ G
Sbjct: 591 SANAESLQGVTPLHLAA----QEGHTEMVELLLSKQANSNLGNKSGLTPL-HLAAQEGHV 645
Query: 170 KLRELLLWH 178
+ LL+ H
Sbjct: 646 PVATLLIDH 654
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A + LL+ N V + G TPLH+AA A+LLL GA +
Sbjct: 143 LHIAARNDDTRTAAVLLQNDPNPDV----LSKTGFTPLHIAAHYENLNMAQLLLNRGANV 198
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
NG+TPLH++ R + V+ LL++ A+ + +G TPL H + G +
Sbjct: 199 NFTPQNGITPLHIAS----RRGNVNMVRLLLDWKAEKETRTKDGLTPL-HCAARNGHVHI 253
Query: 172 RELLLWH 178
E+LL H
Sbjct: 254 SEILLDH 260
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+P+H++A + + V+ LL++ E++ + TPLH+AA G + AK+LL GA
Sbjct: 273 SPIHMAAQGDHLDCVRLLLQY----NAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGA 328
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
++A NG TPLH++ + ++ LL+ A A G TPL
Sbjct: 329 KPNSRALNGFTPLHIAC----KKNHSRVMELLLKTGASIDAVTESGLTPL 374
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL V+ +V L+ + KV L A LH+AA+N A +LL +
Sbjct: 112 TPLAVALQQGHENVVAHLINYGTKGKVRLPA--------LHIAARNDDTRTAAVLLQNDP 163
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ + G TPLH++ Y E+ + LL A+ + G TPL H+++ G+
Sbjct: 164 NPDVLSKTGFTPLHIAAHY----ENLNMAQLLLNRGANVNFTPQNGITPL-HIASRRGNV 218
Query: 170 KLRELLL-WHSEEQRKRR 186
+ LLL W +E++ + +
Sbjct: 219 NMVRLLLDWKAEKETRTK 236
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 60/128 (46%), Gaps = 12/128 (9%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH +A A +VK LL+ N + A G TPLH+AA+ G E LL
Sbjct: 438 QTPLHCAARVGHANMVKLLLDNNANPNLATTA----GHTPLHIAAREGHVETVLTLLEKR 493
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A G TPLH++ Y V LL + + + K+ G TPL HL+ +
Sbjct: 494 ASQACMTKKGFTPLHVAAKYG-----KVRVAELLLEHPNAAGKN--GLTPL-HLAVHHNN 545
Query: 169 AKLRELLL 176
+ +LLL
Sbjct: 546 LDIVKLLL 553
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 10/128 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++ N + +++ LL+ + ++A G TPLH+A+ G K LL GA
Sbjct: 339 TPLHIACKKNHSRVMELLLKTGAS----IDAVTESGLTPLHVASFMGHLSIVKNLLQRGA 394
Query: 110 FIEAKANNGM-TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
+N + TPLH++ R+ + LL+ A + K + +TPL H + G
Sbjct: 395 SPNVSSNVKVETPLHMAA----RAGHIEVAEYLLQNKAKVNGKAKDDQTPL-HCAARVGH 449
Query: 169 AKLRELLL 176
A + +LLL
Sbjct: 450 ANMVKLLL 457
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 30/150 (20%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ ++V LL + ++ LE + G T LH+AA G +E + L+ +GA +
Sbjct: 48 LHLASKEGHVKMVVELL----HKEIILETKTKKGNTALHIAALAGQDEVVRELVNYGANV 103
Query: 112 EAKANNGMTPL-------------HL------------SVWYSIRSEDYATVKTLLEYNA 146
A++ +G TPL HL ++ + R++D T LL+ +
Sbjct: 104 NAQSQDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDP 163
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ G TPL H++ + + +LLL
Sbjct: 164 NPDVLSKTGFTPL-HIAAHYENLNMAQLLL 192
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A + L++ ++A G TPLH+A G + K LL A
Sbjct: 634 TPLHLAAQEGHVPVATLLIDHGAT----VDAATRMGYTPLHVACHYGNIKLVKFLLQKKA 689
Query: 110 FIEAKANNGMTPLHLS 125
+ AK NG TPL ++
Sbjct: 690 NVNAKTKNGATPLAIA 705
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V++ N G LH+A+K G + LL +E K G T LH++ ++ +D
Sbjct: 35 VDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETKTKKGNTALHIA---ALAGQD- 90
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
V+ L+ Y A+ +A+ +G TPL
Sbjct: 91 EVVRELVNYGANVNAQSQDGFTPL 114
>gi|326781012|ref|ZP_08240277.1| AAA ATPase central domain protein [Streptomyces griseus XylebKG-1]
gi|326661345|gb|EGE46191.1| AAA ATPase central domain protein [Streptomyces griseus XylebKG-1]
Length = 809
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 547 GELDALVGLDSVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTTVARL 605
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 606 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 642
>gi|218847992|ref|YP_002454835.1| stage V sporulation protein K [Bacillus cereus G9842]
gi|218546123|gb|ACK98516.1| stage V sporulation protein K [Bacillus cereus G9842]
Length = 550
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVA 260
LE E +NI+G +K +R ++++ RK L+ + + HM F G+PG GKT A
Sbjct: 288 LEKEFNNIIGNESIKELVRSLESQIIINNERKKFDLQ-KSDQSLHMVFKGSPGVGKTTFA 346
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
RI+ RLL + +L + EV R+DLV +VG T KT+ +
Sbjct: 347 RIIARLLKEMKVLKKGHLVEVDRSDLVAGYVGQTAIKTKEVI 388
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
E +VGL + K L + + ++RK G + H FLGN G GKT ARIL
Sbjct: 25 EAQKLVGLRKFKDFLIELLSFVEFQQKRKEQGFNEDIQ-SFHTVFLGNAGVGKTTAARIL 83
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
++LY +G++ V EV R+DLV E+VG T KT+
Sbjct: 84 AKMLYGLGVVENKNVVEVSRSDLVSEYVGQTAIKTQ 119
>gi|443488996|ref|YP_007367143.1| hypothetical protein MULP_00545 [Mycobacterium liflandii 128FXT]
gi|442581493|gb|AGC60636.1| hypothetical protein MULP_00545 [Mycobacterium liflandii 128FXT]
Length = 620
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F G PGTGKT +
Sbjct: 325 EAELQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRTHHLIFAGPPGTGKTTI 383
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + + EV R DL+G+ +G T KT + L + L
Sbjct: 384 ARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 436
>gi|358399328|gb|EHK48671.1| hypothetical protein TRIATDRAFT_214847 [Trichoderma atroviride IMI
206040]
Length = 195
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPL ++A + +IV LL N +LEA++ G+TPL +AA NG +LLL G
Sbjct: 72 QTPLSLAAIHGHQDIVLMLL----NRGSDLEARDNNGQTPLSLAAANGHWGIVQLLLNRG 127
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
+ IEA+ NNG TPL L+ +IR + V+ LL +D A+DN GKTPL L+ G
Sbjct: 128 SDIEARDNNGQTPLSLA---AIRGH-WDIVQLLLNRGSDLEARDNSGKTPLS-LAAANGH 182
Query: 169 AKLRELL 175
+ ELL
Sbjct: 183 QAVVELL 189
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 14/123 (11%)
Query: 41 NERNPVMAQTP---LH-VSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNG 96
N N +MA P H V AGY E L+ G D A + G+TPL +AA +G
Sbjct: 29 NLTNILMALLPNLLFHEVEAGY---EYTTDLMIIHGCDP---NAGDTSGQTPLSLAAIHG 82
Query: 97 CNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGK 156
+ +LL G+ +EA+ NNG TPL L+ + + V+ LL +D A+DN G+
Sbjct: 83 HQDIVLMLLNRGSDLEARDNNGQTPLSLAA----ANGHWGIVQLLLNRGSDIEARDNNGQ 138
Query: 157 TPL 159
TPL
Sbjct: 139 TPL 141
>gi|154418257|ref|XP_001582147.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121916380|gb|EAY21161.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 487
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 17/199 (8%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N ++ K A H ++ +A LL + + +NE++ V +T LH +A K EI
Sbjct: 209 NIHKKDHFGKTALHHAVNKNSKEIA--ELLILHGTNVNEKD-VSGKTALHYAATIRKKEI 265
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ L+ N + +N YG+T LH AA+ C E A+LL+ HGA I K G T LH
Sbjct: 266 AEFLILHGAN----INERNNYGQTTLHYAAEYNCKEIAELLILHGANINEKDEKGKTALH 321
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH----- 178
+ Y+ + + L+ +N + + KD +GKT L H + S ++ ELL+ H
Sbjct: 322 YAAAYNCKE----IAELLILHNTNINEKDEKGKTAL-HYTVCKNSKEIAELLILHGVPVN 376
Query: 179 SEEQRKRRALEACSETKAK 197
++++ + AL +E K
Sbjct: 377 EKDEKGKTALHYAAENNYK 395
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 35/168 (20%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGN----DKVE------------------ 77
+NE++ + QT L +A YN EI + L+ N D+ E
Sbjct: 78 INEKDE-LGQTALQFAALYNSKEIAELLISHGANIDEKDRFEKTTLQCAAEINSKETAKL 136
Query: 78 -------LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSI 130
++ ++ YG+T LH AA C E A+LL+ HG+ I+ K + T LH Y+
Sbjct: 137 LILHGAKIDEKDQYGKTALHYAADKNCKETAELLILHGSNIDEKGEDEKTALH----YAA 192
Query: 131 RSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ T + L+ + KD+ GKT L H N S ++ ELL+ H
Sbjct: 193 DKNNKETAELLILKGINIHKKDHFGKTALHHAVN-KNSKEIAELLILH 239
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A N E + LL G + + ++ +G+T LH A E A+LL+ HG
Sbjct: 185 KTALHYAADKNNKETAE-LLILKG---INIHKKDHFGKTALHHAVNKNSKEIAELLILHG 240
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
+ K +G T LH + +IR ++ A L+ + A+ + ++N G+T L H +
Sbjct: 241 TNVNEKDVSGKTALHYAA--TIRKKEIAEF--LILHGANINERNNYGQTTL-HYAAEYNC 295
Query: 169 AKLRELLLWH 178
++ ELL+ H
Sbjct: 296 KEIAELLILH 305
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 5 QDRRSRSA-KPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
+D + ++A A + C + +LL + +NE++ +T LH + N EI
Sbjct: 312 KDEKGKTALHYAAAYNCKEIAELLILHN------TNINEKDE-KGKTALHYTVCKNSKEI 364
Query: 64 VKSLL--EWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ L+ P N+K E G+T LH AA+N E + L+ G+ I K G
Sbjct: 365 AELLILHGVPVNEKDE------KGKTALHYAAENNYKEITEFLILCGSNINEKDEKGKAA 418
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH Y+ + + L+ A+ + KD +GKT L H + ++ ELL+ H
Sbjct: 419 LH----YAAENNKKEITELLISQGANLNEKDKKGKTAL-HYAMRKNYKEITELLILH 470
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
++E+ + V + ++ YGE L A N E + L++HGA K G T L L+
Sbjct: 1 MVEFLISHGVNINGKDEYGEFALRTAISNNNKEMTEFLISHGAKFNEKVRIGKTALQLAA 60
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
Y+ + T + L+ Y A+ + KD G+T L + S ++ ELL+ H
Sbjct: 61 LYNSKE----TAELLISYGANINEKDELGQTALQ-FAALYNSKEIAELLISH 107
>gi|88770680|gb|ABD51943.1| CbbX protein [Rhodomonas salina]
Length = 391
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNP 252
K +++L+N+L VGL +K ++++ A +++D+ R+ LGL G P HM F G P
Sbjct: 105 VKDILEQLDNDL---VGLVPVKSRVKEIAALLVVDKLRRNLGLDTGV--PSLHMCFTGAP 159
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VA +G++L +G + R DLVG++VGHT PKT+
Sbjct: 160 GTGKTTVAMRMGQILQRMGYSRQGHLVVATRDDLVGQYVGHTAPKTK 206
>gi|453053899|gb|EMF01357.1| ATPase AAA [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 810
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 550 ELDALVGLESVKKEVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTTVARLY 608
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 609 GEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 644
>gi|182440345|ref|YP_001828064.1| hypothetical protein SGR_6552 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178468861|dbj|BAG23381.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 809
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT VAR+
Sbjct: 547 GELDALVGLDSVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTTVARL 605
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 606 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 642
>gi|123402177|ref|XP_001302003.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121883248|gb|EAX89073.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 1167
Score = 74.3 bits (181), Expect = 7e-11, Method: Composition-based stats.
Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 9/139 (6%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+ V T LH ++ N EI K LL G D + A++ G T LH A+ N E
Sbjct: 441 INEKELVKGYTALHYASLNNNIEIAK-LLILHGAD---INAKDANGPTALHYASLNNNIE 496
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
AKLL+ HGA + NGMT LH Y+ ++ V+ L+ +NAD +AKD G T L
Sbjct: 497 IAKLLILHGANVNETDKNGMTVLH----YAAEKDNLQIVELLILHNADINAKDINGTTAL 552
Query: 160 DHLSNGPGSAKLRELLLWH 178
H ++G + ++ ELL+ H
Sbjct: 553 -HSASGCKNKEILELLISH 570
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 10/154 (6%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
LL + + +N++N A LH++A +N EI++ L+ + ++ ++++ G T LH
Sbjct: 830 LLISHNANINDKNNKNASV-LHIAARHNNKEIMELLI----SHSSDINSKDIDGFTALHY 884
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
A+ + CN+ LL+HG +I+ K N G+T LH + + + TV L+ + A+ + K
Sbjct: 885 ASYHNCNQLISTLLSHGVYIDEKCNKGLTALHWAALNNCKE----TVNELISHGANINEK 940
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
D G T L H ++ ++ E+L+ H +R
Sbjct: 941 DINGSTAL-HCASNKNCQEIAEMLISHGANVNER 973
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH +A N E V L+ N + +++ G T LH A+ C E A++L++HGA
Sbjct: 913 TALHWAALNNCKETVNELISHGAN----INEKDINGSTALHCASNKNCQEIAEMLISHGA 968
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ + NG T LH + Y+ V LL AD +AK+N+G T + HL+
Sbjct: 969 NVNERGLNGWTALHFASRYNCPE----IVMMLLSNGADINAKNNDGGTAI-HLATVGNHK 1023
Query: 170 KLRELLLWHSEEQRKRR 186
+ ELL+ H +++
Sbjct: 1024 NILELLISHGANVNEKK 1040
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ +L + L+ N + N ++ + T LH ++G EI++ L+ N
Sbjct: 519 LHYAAEKDNLQIVELLILHNADI-NAKD-INGTTALHSASGCKNKEILELLISHGAN--- 573
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
L ++ G T LH A+ E + L+ HGA + K NGMT LH Y+ ++D
Sbjct: 574 -LNEKDKNGCTTLHYASSKKNKEIVEFLIVHGAAVNEKDKNGMTILH----YAAETDDEY 628
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDH--LSNGPGSAKLRELLLWH 178
V+ L+ + AD + D G TPL + + N G L ELL+ H
Sbjct: 629 IVELLILHGADINVNDINGNTPLFYAIIHNDKG---LVELLVSH 669
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
+ T LH+ A NK++ + LL G + + ++N G TPLH AA N C E +LLL
Sbjct: 711 IYENTVLHL-ALLNKSDEISKLLILHGAN---VNSKNSSGGTPLHFAADNNCKEIVELLL 766
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A GA ++ K +G T LH++ + + L+ + AD +AK +G PL
Sbjct: 767 ASGANVDDKTISGHTALHIAAQKGYKE----IAEILILHGADLNAKSADGTPPL 816
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+T L V+ + EIV+ L+ + ++ ++++Y T LH+A N +E +KLL+ H
Sbjct: 680 GKTALMVAVIQHSQEIVELLI----SHGADINSKDIYENTVLHLALLNKSDEISKLLILH 735
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA + +K ++G TPLH + + + V+ LL A+ K G T L H++ G
Sbjct: 736 GANVNSKNSSGGTPLHFAADNNCKE----IVELLLASGANVDDKTISGHTAL-HIAAQKG 790
Query: 168 SAKLRELLLWHSEEQRKRRA 187
++ E+L+ H + + A
Sbjct: 791 YKEIAEILILHGADLNAKSA 810
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 35/188 (18%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
CA + + +L + + +NER + T LH ++ YN EIV LL ++ ++
Sbjct: 950 CASNKNCQEIAEMLISHGANVNERG-LNGWTALHFASRYNCPEIVMMLL----SNGADIN 1004
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH--------------LS 125
A+N G T +H+A +LL++HGA + K N G T LH +S
Sbjct: 1005 AKNNDGGTAIHLATVGNHKNILELLISHGANVNEKKNIGWTALHIASQKNYQEVAEFLIS 1064
Query: 126 VWYSIRSEDY---------------ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
++ +D+ +T +TL+ + A+ + +D +GKT L H S +
Sbjct: 1065 RGANVNEKDFDGTTSLQITAFYNSVSTAETLISHGANINEQDKDGKTAL-HYGAEKNSKE 1123
Query: 171 LRELLLWH 178
E+L+ H
Sbjct: 1124 AIEILISH 1131
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
SL+E+ + E+ A+ +H AA C E + L+ +GAFI+++ ++G T LHL
Sbjct: 297 SLVEYLISKCDEINARGDDSSKAIHFAASLDCKEILEFLILNGAFIDSRRDDGTTALHL- 355
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS-----E 180
+I + + L+ + AD +A+ ++G TPL HL+ ++ LL+ +S +
Sbjct: 356 ---AIHQNNKEIAEFLILHGADTNAQRSDGSTPL-HLAARYNCIEIARLLISNSANIDTK 411
Query: 181 EQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKG 224
+ R AL S K E+ ++ LH KI ++ KG
Sbjct: 412 DNIGRNALHFASSINHK------EIVELLLLHGAKINEKELVKG 449
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
+H +A + EI++ L+ + ++++ G T LH+A E A+ L+ HGA
Sbjct: 320 IHFAASLDCKEILEFLIL----NGAFIDSRRDDGTTALHLAIHQNNKEIAEFLILHGADT 375
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
A+ ++G TPLHL+ Y+ + L+ +A+ KDN G+ L H ++ ++
Sbjct: 376 NAQRSDGSTPLHLAARYNC----IEIARLLISNSANIDTKDNIGRNAL-HFASSINHKEI 430
Query: 172 RELLLWH 178
ELLL H
Sbjct: 431 VELLLLH 437
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 35/159 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++ N EI + L+ G D AQ G TPLH+AA+ C E A+LL+++ A
Sbjct: 351 TALHLAIHQNNKEIAEFLI-LHGADT---NAQRSDGSTPLHLAARYNCIEIARLLISNSA 406
Query: 110 FIEAKANNGMTPLHL------------------------------SVWYSIRSEDYATVK 139
I+ K N G LH ++ Y+ + + K
Sbjct: 407 NIDTKDNIGRNALHFASSINHKEIVELLLLHGAKINEKELVKGYTALHYASLNNNIEIAK 466
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
L+ + AD +AKD G T L H ++ + ++ +LL+ H
Sbjct: 467 LLILHGADINAKDANGPTAL-HYASLNNNIEIAKLLILH 504
Score = 45.8 bits (107), Expect = 0.022, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ T LH +A + IV+ LL G D + ++ G TPL A +
Sbjct: 607 VNEKDK-NGMTILHYAAETDDEYIVE-LLILHGAD---INVNDINGNTPLFYAIIHNDKG 661
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+LL++HGA IEAK N G T L ++V V+ L+ + AD ++KD T L
Sbjct: 662 LVELLVSHGANIEAKNNKGKTALMVAVI----QHSQEIVELLISHGADINSKDIYENTVL 717
Query: 160 DHLSNGPGSAKLRELLLWH 178
HL+ S ++ +LL+ H
Sbjct: 718 -HLALLNKSDEISKLLILH 735
Score = 45.4 bits (106), Expect = 0.032, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 55/202 (27%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAK------- 102
TPLH +A N EIV+ LL N ++ + + G T LH+AA+ G E A+
Sbjct: 748 TPLHFAADNNCKEIVELLLASGAN----VDDKTISGHTALHIAAQKGYKEIAEILILHGA 803
Query: 103 --------------------------LLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
LL++H A I K N + LH++ R +
Sbjct: 804 DLNAKSADGTPPLFAAADFENKEIIELLISHNANINDKNNKNASVLHIAA----RHNNKE 859
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS---EEQRKR-------R 186
++ L+ +++D ++KD +G T L H ++ +L LL H +E+ +
Sbjct: 860 IMELLISHSSDINSKDIDGFTAL-HYASYHNCNQLISTLLSHGVYIDEKCNKGLTALHWA 918
Query: 187 ALEACSETKAKMDELENELSNI 208
AL C ET ++EL + +NI
Sbjct: 919 ALNNCKET---VNELISHGANI 937
Score = 42.4 bits (98), Expect = 0.28, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T L ++A YN ++L+ N + Q+ G+T LH A+ EA ++L++HGA
Sbjct: 1078 TSLQITAFYNSVSTAETLISHGAN----INEQDKDGKTALHYGAEKNSKEAIEILISHGA 1133
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
I + +G T Y+I + T+ L+ +
Sbjct: 1134 NINGQDKDGKTVFE----YAIENNSQETLDFLISH 1164
>gi|118616918|ref|YP_905250.1| hypothetical protein MUL_1204 [Mycobacterium ulcerans Agy99]
gi|118569028|gb|ABL03779.1| conserved protein [Mycobacterium ulcerans Agy99]
Length = 620
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F G PGTGKT +
Sbjct: 325 EAELQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRTHHLIFAGPPGTGKTTI 383
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + + EV R DL+G+ +G T KT + L + L
Sbjct: 384 ARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 436
>gi|172057182|ref|YP_001813642.1| ATPase central domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171989703|gb|ACB60625.1| AAA ATPase central domain protein [Exiguobacterium sibiricum
255-15]
Length = 747
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL ++GL ++K+++ + + + ++R + G + + HM F+GNPGTGKT +AR++
Sbjct: 224 ELDAMIGLEDIKLRVHQMYRFLKYQQKRTSDGYRSSDQPSLHMIFMGNPGTGKTTLARLM 283
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTG----PKTRRRVGHLL 306
++ + +G+L V E R+ LVG FVG T K R VG +L
Sbjct: 284 AKIYHELGLLERPEVVETDRSSLVGAFVGQTEEQVMSKVREAVGGVL 330
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTM 258
+E L +VGL LK ++++ + + +RR+ G KV P H F GN GTGKT
Sbjct: 494 VEERLEQLVGLQPLKAEIKQIQALLSMQKRRQEAGFKV---LPVELHAVFSGNSGTGKTT 550
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VA + +L G L + V R DLV +VG T +TR
Sbjct: 551 VAALYADVLRQCGYLKRGHLKVVSRADLVSGYVGQTAQQTR 591
>gi|254386281|ref|ZP_05001590.1| ATPase [Streptomyces sp. Mg1]
gi|194345135|gb|EDX26101.1| ATPase [Streptomyces sp. Mg1]
Length = 651
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K Q++ + + + R GL V +PP H F G GTGKT VARILGR
Sbjct: 369 MVGLEPVKRQVKALSAQLHMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVARILGR 425
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCLTFI 315
+ Y +G+L D + E QR DLVGEF+G T K + S I + F+
Sbjct: 426 VFYALGLLGGDHLVEAQRADLVGEFLGQTAVKANELID---SAIGGVLFV 472
>gi|183980569|ref|YP_001848860.1| hypothetical protein MMAR_0541 [Mycobacterium marinum M]
gi|183173895|gb|ACC39005.1| conserved protein [Mycobacterium marinum M]
Length = 620
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E +L+ +GL E+K Q+ + + ++ RK GL V A+R H+ F G PGTGKT +
Sbjct: 325 EAELQLAEFIGLEEVKNQVSRLKSSVAMELVRKQRGLAV-AQRTHHLIFAGPPGTGKTTI 383
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ ++ +G+L + + EV R DL+G+ +G T KT + L + L
Sbjct: 384 ARVVAKIYCGLGLLKRENIREVHRADLIGQHIGETEAKTNAIIDSALDGVLFL 436
>gi|317123709|ref|YP_004097821.1| ATPase AAA [Intrasporangium calvum DSM 43043]
gi|315587797|gb|ADU47094.1| AAA ATPase central domain protein [Intrasporangium calvum DSM
43043]
Length = 549
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
++EL EL ++GL +K ++ + + ++ R GLK AR H+ F+GNPGTGK
Sbjct: 238 SVEELLAELDAMIGLGRVKKEIHRQVALLKVERMRVDAGLK-AARMSRHLVFVGNPGTGK 296
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
T VAR++G + +G+LP ++ EV R++LV +VG T KT
Sbjct: 297 TTVARLVGAIYRALGLLPQGQLVEVDRSELVAGYVGQTAMKT 338
>gi|303324764|pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
gi|303324765|pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
gi|303324766|pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
gi|303324767|pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N ++ TPLH++A EIV+ LL+ + + A++ G TPLH
Sbjct: 19 RILMANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGAD----VNAKDKDGYTPLH 73
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+ G E ++LL GA + AK +G TPLHL+ R V+ LL+ AD +A
Sbjct: 74 LAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA----REGHLEIVEVLLKAGADVNA 129
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKTP D L+ G+ + E+L
Sbjct: 130 QDKFGKTPFD-LAIDNGNEDIAEVL 153
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A++ G TPLH+AA+ G E ++LL GA + AK +G TPLHL+ R
Sbjct: 27 DVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA----REGHLE 82
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL+ AD +AKD +G TPL HL+ G ++ E+LL
Sbjct: 83 IVEVLLKAGADVNAKDKDGYTPL-HLAAREGHLEIVEVLL 121
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + AK +G TPLHL+ R V+ LL+ AD +AK
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAA----REGHLEIVEVLLKAGADVNAK 64
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D +G TPL HL+ G ++ E+LL
Sbjct: 65 DKDGYTPL-HLAAREGHLEIVEVLL 88
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L + LL+ + N ++ TPLH++A EIV+ LL+ +
Sbjct: 39 LHLAAREGHLEIVEVLLKAGADV-NAKDK-DGYTPLHLAAREGHLEIVEVLLKAGAD--- 93
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ A++ G TPLH+AA+ G E ++LL GA + A+ G TP L++ +ED A
Sbjct: 94 -VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNG--NEDIA 150
Query: 137 TV 138
V
Sbjct: 151 EV 152
>gi|448927452|gb|AGE51026.1| ankyrin repeat PH and SEC7 domain containing protein [Paramecium
bursaria Chlorella virus CVB-1]
Length = 292
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 23/150 (15%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H ++ D++ L+ + + E + A TPLH + A+I++ LLE
Sbjct: 5 LHEAVRNDDVVTVLALIAQEADVTAE--DLYAHTPLHFA---KNADIIRVLLE----HGA 55
Query: 77 ELEAQNMYGETPLHMAAKNGCN-------EAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
++A N++G TPLH+ + C + +LLL HGA + AK N G TPLH+
Sbjct: 56 HIDAINIHGYTPLHLVVRASCPQLHITHIDLVRLLLHHGANVNAKTNWGWTPLHI----- 110
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ D L+E+ AD SAKD++G TPL
Sbjct: 111 --ASDGDVACMLIEHGADISAKDSDGCTPL 138
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 16/103 (15%)
Query: 68 LEWPGNDKV---------ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNG 118
L W GN + ++ A++ +G TPLH A + G + A++LL H + A+ +G
Sbjct: 138 LYWAGNKCIARLLTAHGSDVSAKDRHGYTPLHHA-RTG--DIARVLLEHEVDVNARGYDG 194
Query: 119 MTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
TPLH++ S R Y V+ LLE+ AD AKDN+G+TP ++
Sbjct: 195 CTPLHVA---SRRGRPY-VVRVLLEHGADIRAKDNDGRTPFEY 233
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH + +I + LLE +V++ A+ G TPLH+A++ G ++LL HGA
Sbjct: 166 TPLHHA---RTGDIARVLLE----HEVDVNARGYDGCTPLHVASRRGRPYVVRVLLEHGA 218
Query: 110 FIEAKANNGMTPL 122
I AK N+G TP
Sbjct: 219 DIRAKDNDGRTPF 231
>gi|302532889|ref|ZP_07285231.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302441784|gb|EFL13600.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 839
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E+ +L +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT V
Sbjct: 572 EVLGQLDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVRR-HLVFTGSPGTGKTTV 630
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
AR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 631 ARLYGEILAALGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 670
>gi|123449118|ref|XP_001313281.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121895159|gb|EAY00352.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 930
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T L+++A N EI + L+ N ++ ++ GET LH+AA N E A+LL+ HG
Sbjct: 379 ETALYIAALNNSKEIAEFLISHGAN----IDEKDNDGETALHIAALNNSKETAELLILHG 434
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I+ K NNG T LH++ W + + T + L+ + A+ + K+N G+T L H++ S
Sbjct: 435 ANIDEKDNNGETALHIAAWNNFKE----TAELLILHGANINEKNNNGETAL-HIAAWNNS 489
Query: 169 AKLRELLLWHS 179
+ ELL+ HS
Sbjct: 490 KETAELLISHS 500
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N + +N GET LH+AA N E A+LL++H
Sbjct: 445 ETALHIAAWNNFKETAELLILHGAN----INEKNNNGETALHIAAWNNSKETAELLISHS 500
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I+ K NNG T LH++ W + + T + L+ ++A+ KDN G+T L +++ S
Sbjct: 501 ANIDEKDNNGETALHIAAWNNFKE----TAEFLISHSANIDEKDNNGETAL-YIAAWNNS 555
Query: 169 AKLRELLLWHS 179
+ ELL+ HS
Sbjct: 556 KETAELLISHS 566
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N + ++ GET LH+AA N E A+LL+ HG
Sbjct: 676 ETALHIAALNNSKETAELLILHGAN----INEKDNNGETALHIAALNNSKETAELLILHG 731
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K NNG T LH++ W + + T + L+ + A+ + K+N GKT L H++
Sbjct: 732 ANINEKDNNGETALHIAAWNNFKE----TAELLILHGANINEKNNNGKTAL-HIAAWNNY 786
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 787 KETAELLISH 796
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N EI + L+ N ++ ++ GET LH
Sbjct: 626 ELLISHGANINEKNE-DGETALYIAALNNYKEIAEFLISHGAN----IDEKDNDGETALH 680
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+LL+ HGA I K NNG T LH++ + + T + L+ + A+ +
Sbjct: 681 IAALNNSKETAELLILHGANINEKDNNGETALHIAALNNSKE----TAELLILHGANINE 736
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN G+T L H++ + ELL+ H
Sbjct: 737 KDNNGETAL-HIAAWNNFKETAELLILH 763
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSL---LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGN 73
I+ C L F L SL +NE+N +T LH++A N E + L+ N
Sbjct: 279 INKCFVYTPLFNFPSLCEYFLSLGANINEKNN-NGKTALHIAAWNNYKETAELLISHGAN 337
Query: 74 DKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSE 133
+ +N GET L++AA N E A+LL++HGA I+ K N+G T L+++ + +
Sbjct: 338 ----INEKNEDGETALYIAALNNYKETAELLISHGANIDEKDNDGETALYIAALNNSKE- 392
Query: 134 DYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ L+ + A+ KDN+G+T L H++ S + ELL+ H
Sbjct: 393 ---IAEFLISHGANIDEKDNDGETAL-HIAALNNSKETAELLILH 433
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + ++E+N +T L+ + N EI + L+ N + +N GET L+
Sbjct: 560 ELLISHSANIDEKNN-YGKTALYNAVLDNFKEIAELLISHGAN----INEKNEDGETALY 614
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+LL++HGA I K +G T L+++ + + + L+ + A+
Sbjct: 615 IAALNNYKETAELLISHGANINEKNEDGETALYIAALNNYKE----IAEFLISHGANIDE 670
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN+G+T L H++ S + ELL+ H
Sbjct: 671 KDNDGETAL-HIAALNNSKETAELLILH 697
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
C + +L +F + N+ N TPL +N + + L N +
Sbjct: 260 CGKHKNLESFLVYFDQ----TNDINKCFVYTPL-----FNFPSLCEYFLSLGAN----IN 306
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
+N G+T LH+AA N E A+LL++HGA I K +G T L+++ + + T +
Sbjct: 307 EKNNNGKTALHIAAWNNYKETAELLISHGANINEKNEDGETALYIAALNNYKE----TAE 362
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
L+ + A+ KDN+G+T L +++ S ++ E L+ H
Sbjct: 363 LLISHGANIDEKDNDGETAL-YIAALNNSKEIAEFLISH 400
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N E + L+ N + +N GET L+
Sbjct: 791 ELLISHGANINEKNE-DGETALYIAALNNYKETAELLISHGAN----INEKNEDGETALY 845
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA N E A+ L++HGA I K +G T L+++ + + + L+ + A+
Sbjct: 846 IAALNNYKEIAEFLISHGANINEKNEDGETALYIAALNNYKE----IAEFLISHGANIDE 901
Query: 151 KDNEGKTPL 159
KDN+G+T L
Sbjct: 902 KDNDGETAL 910
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N +T LH++A N E + L+ N + +N GET L++AA N E
Sbjct: 767 INEKNN-NGKTALHIAAWNNYKETAELLISHGAN----INEKNEDGETALYIAALNNYKE 821
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HGA I K +G T L+++ + + + L+ + A+ + K+ +G+T L
Sbjct: 822 TAELLISHGANINEKNEDGETALYIAALNNYKE----IAEFLISHGANINEKNEDGETAL 877
Query: 160 DHLSNGPGSAKLRELLLWH 178
+++ ++ E L+ H
Sbjct: 878 -YIAALNNYKEIAEFLISH 895
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N + +N G+T LH+AA N E A+LL++HG
Sbjct: 742 ETALHIAAWNNFKETAELLILHGAN----INEKNNNGKTALHIAAWNNYKETAELLISHG 797
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G T L+++ + + T + L+ + A+ + K+ +G+T L +++
Sbjct: 798 ANINEKNEDGETALYIAALNNYKE----TAELLISHGANINEKNEDGETAL-YIAALNNY 852
Query: 169 AKLRELLLWH 178
++ E L+ H
Sbjct: 853 KEIAEFLISH 862
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH++A N E + L+ N ++ ++ GET L++AA N E A+LL++H
Sbjct: 511 ETALHIAAWNNFKETAEFLISHSAN----IDEKDNNGETALYIAAWNNSKETAELLISHS 566
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I+ K N G T L+ +V + + + L+ + A+ + K+ +G+T L +++
Sbjct: 567 ANIDEKNNYGKTALYNAVLDNFKE----IAELLISHGANINEKNEDGETAL-YIAALNNY 621
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 622 KETAELLISH 631
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+N +T L+++A N EI + L+ N + +N GET L+
Sbjct: 824 ELLISHGANINEKNE-DGETALYIAALNNYKEIAEFLISHGAN----INEKNEDGETALY 878
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIR 131
+AA N E A+ L++HGA I+ K N+G T L+++ + +
Sbjct: 879 IAALNNYKEIAEFLISHGANIDEKDNDGETALYIAALNNFK 919
>gi|326677775|ref|XP_003200911.1| PREDICTED: ankyrin-1-like [Danio rerio]
Length = 1981
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IVKSLL+ + A N+ ETPLHMAA+ G E A+ LL + A
Sbjct: 439 TPLHVAAFMGHLNIVKSLLQRGASPN----ASNVKVETPLHMAARAGHCEVAQFLLQNNA 494
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AKA + TPLH + R VK L+E+ A+ + G TPL H++ G A
Sbjct: 495 QVDAKAKDDQTPLHCAA----RMGHKELVKLLMEHKANPDSATTAGHTPL-HIAAREGHA 549
Query: 170 KLRELLLWHSEEQRK 184
+ +LL + +Q K
Sbjct: 550 QTTRILLDENAQQTK 564
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNP-VMAQT---PLHVSAGYNKAEIVKSLLEWPG 72
+H A++ D LL+ +P NP V+++T PLH++A Y + + LL
Sbjct: 210 LHIAARNDDTRTAAVLLQNDP------NPDVLSKTGFTPLHIAAHYENLSVAQLLLNRGA 263
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRS 132
N V +N G TPLH+A++ G +LLL GA I+AK + +TPLH + R+
Sbjct: 264 N--VNFTPKN--GITPLHIASRRGNVIMVRLLLDRGAQIDAKTKDELTPLHCAA----RN 315
Query: 133 EDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSE 180
V+ LL+ A AK G +P+ + G +R+LL +++E
Sbjct: 316 GHVRVVEILLDQGAPLQAKTKNGLSPIHMAAQGDHMDCVRQLLQYNAE 363
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+ Y K ++V+ LLE N A G TPLH+A + + KLL++ G
Sbjct: 571 TPLHVACKYGKVDVVELLLERGANPN----AAGKNGLTPLHVAVHHNNLDVVKLLVSKGG 626
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A NG T LH++ + +LL+Y A+ +++ +G TPL HL++ G
Sbjct: 627 SPHSTARNGYTALHIAA----KQNQLEVASSLLQYGANANSESLQGITPL-HLASQEGQP 681
Query: 170 KLRELLL 176
+ LL+
Sbjct: 682 DMVALLI 688
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 85/165 (51%), Gaps = 11/165 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
IH AQ + ++LL+ N + + + TPLHV+A +VK LL+
Sbjct: 342 IHMAAQGDHMDCVRQLLQYNAEI--DDITLDHLTPLHVAAHCGHHRMVKVLLD----KGA 395
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ A+ + G TPLH+A K + LLL H A +EA +G+TPLH++ +
Sbjct: 396 KANARALNGFTPLHIACKKNHMRSMDLLLKHSASLEAVTESGLTPLHVAAFMG----HLN 451
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
VK+LL+ A +A + + +TPL H++ G ++ + LL ++ +
Sbjct: 452 IVKSLLQRGASPNASNVKVETPL-HMAARAGHCEVAQFLLQNNAQ 495
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++G Q LL+ N + + QTPLH +A E+VK L+E N
Sbjct: 474 LHMAARAGHCEVAQFLLQNNAQV--DAKAKDDQTPLHCAARMGHKELVKLLMEHKANP-- 529
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ G TPLH+AA+ G + ++LL A G TPLH++ Y
Sbjct: 530 --DSATTAGHTPLHIAAREGHAQTTRILLDENAQQTKMTKKGFTPLHVACKYG----KVD 583
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
V+ LLE A+ +A G TPL
Sbjct: 584 VVELLLERGANPNAAGKNGLTPL 606
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+++ +V+ LL+ +++A+ TPLH AA+NG ++LL GA
Sbjct: 274 TPLHIASRRGNVIMVRLLLDR----GAQIDAKTKDELTPLHCAARNGHVRVVEILLDQGA 329
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK NG++P+H++ + + V+ LL+YNA+ + TPL H++ G
Sbjct: 330 PLQAKTKNGLSPIHMAA----QGDHMDCVRQLLQYNAEIDDITLDHLTPL-HVAAHCGHH 384
Query: 170 KLRELLL 176
++ ++LL
Sbjct: 385 RMVKVLL 391
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A N+ E+ SLL++ N E ++ G TPLH+A++ G + LL++ A
Sbjct: 637 TALHIAAKQNQLEVASSLLQYGANANSE----SLQGITPLHLASQEGQPDMVALLISKQA 692
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL-EYNADCSAKDNEGKTPLDHLSNGPGS 168
+ NG+TPLHL + E + + +L + A A G TPL H++ G+
Sbjct: 693 NVNLGNKNGLTPLHL-----VAQEGHVGIADMLVKQGASVYAASRMGYTPL-HVACHYGN 746
Query: 169 AKLRELLL 176
K+ + LL
Sbjct: 747 IKMVKFLL 754
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H AQ G + L+++ S+ M TPLHV+ Y ++VK LL+ +
Sbjct: 705 LHLVAQEGHVGIADMLVKQGASVYAASR--MGYTPLHVACHYGNIKMVKFLLQ----QQA 758
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+ ++ G TPLH AA+ G + LLL HGA NG +PL ++
Sbjct: 759 HVNSKTRLGYTPLHQAAQQGHTDIVTLLLKHGALPNEITTNGTSPLGIA 807
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+ +N ++VK L+ G+ A+N Y T LH+AAK E A LL +GA
Sbjct: 604 TPLHVAVHHNNLDVVKLLVSKGGSPHST--ARNGY--TALHIAAKQNQLEVASSLLQYGA 659
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+++ G+TPLHL+ + V L+ A+ + + G TPL HL G
Sbjct: 660 NANSESLQGITPLHLAS----QEGQPDMVALLISKQANVNLGNKNGLTPL-HLVAQEGHV 714
Query: 170 KLRELLL 176
+ ++L+
Sbjct: 715 GIADMLV 721
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ ++V LL ++ ++LE G T LH+AA G + L+ +GA +
Sbjct: 82 LHLASKEGHVKMVLELL----HNGIDLETTTKKGNTALHIAALAGQEKVVAELINYGANV 137
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++ G +PL+++ + VK LLE+ A+ S +G TPL
Sbjct: 138 NAQSQKGFSPLYMAA----QENHLEVVKYLLEHGANQSLPTEDGFTPL 181
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 30/152 (19%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A + ++V L+ + N + AQ+ G +PL+MAA+ E K LL HGA
Sbjct: 113 TALHIAALAGQEKVVAELINYGAN----VNAQSQKGFSPLYMAAQENHLEVVKYLLEHGA 168
Query: 110 FIEAKANNGMTPLHLSVW-------------------------YSIRSEDYATVKTLLEY 144
+G TPL +++ + R++D T LL+
Sbjct: 169 NQSLPTEDGFTPLAVALQQGHENVVALLINYGTKGKVRLPALHIAARNDDTRTAAVLLQN 228
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ + G TPL H++ + + +LLL
Sbjct: 229 DPNPDVLSKTGFTPL-HIAAHYENLSVAQLLL 259
>gi|182439892|ref|YP_001827611.1| ATPase [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468408|dbj|BAG22928.1| putative ATPase [Streptomyces griseus subsp. griseus NBRC 13350]
Length = 634
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K Q++ + + + R GL V +PP H F G GTGKT VARILGR
Sbjct: 352 MVGLEPVKRQVKALSAQLNMARLRAEQGLPV---QPPKRHFVFSGPSGTGKTTVARILGR 408
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 409 VFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 452
>gi|408536130|pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
gi|408536131|pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLH +A EIVK LL + + A++ G TPLH AA+NG E KLLL+
Sbjct: 37 GRTPLHYAAENGHKEIVKLLL----SKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSK 92
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
GA AK ++G TPLH Y+ + VK LL AD + D++G+TPLD
Sbjct: 93 GADPNAKDSDGRTPLH----YAAENGHKEIVKLLLSKGADPNTSDSDGRTPLD 141
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
VK LLE + + A + G TPLH AA+NG E KLLL+ GA AK ++G TPLH
Sbjct: 20 VKDLLE----NGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLH 75
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
Y+ + VK LL AD +AKD++G+TPL H + G ++ +LLL
Sbjct: 76 ----YAAENGHKEIVKLLLSKGADPNAKDSDGRTPL-HYAAENGHKEIVKLLL 123
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+NG + K LL +GA A ++G TPLH Y+ + VK LL AD +AK
Sbjct: 11 AAENGNKDRVKDLLENGADPNASDSDGRTPLH----YAAENGHKEIVKLLLSKGADPNAK 66
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D++G+TPL H + G ++ +LLL
Sbjct: 67 DSDGRTPL-HYAAENGHKEIVKLLL 90
>gi|404257363|ref|ZP_10960689.1| putative ATPase [Gordonia namibiensis NBRC 108229]
gi|403404036|dbj|GAB99098.1| putative ATPase [Gordonia namibiensis NBRC 108229]
Length = 594
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+ + EL +GL +K Q+ K L R GL AR H+AF G PGTGKT V
Sbjct: 304 DAQRELGEQIGLESVKQQVAKLQSAATLARVRADRGLSTSAR-SLHLAFTGPPGTGKTTV 362
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
ARI+ ++ +G + TD+V E R DLVGE +G T KT
Sbjct: 363 ARIVAKIYCGLGFIKTDKVVEATRRDLVGEHLGSTAIKT 401
>gi|123337672|ref|XP_001294348.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121872204|gb|EAX81418.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 319
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D ++ AT CA + +L N + +N ++ TPLH +A YN+ E +
Sbjct: 136 DLNAKDKDEATPLHCAARDNSKETAEILISNGADINAKDEDGC-TPLHCAARYNRKETAE 194
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ ++ +L A++ TPLH AA N E A++L+++GA I AK +G TPLH +
Sbjct: 195 ILI----SNGADLNAKDKDEATPLHCAANNNSKETAEILISNGADINAKDEDGCTPLHYA 250
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
Y+ R E T + L+ AD +AKD + TPL ++ S + E+L+
Sbjct: 251 ARYN-RKE---TAEILISNGADLNAKDKDEATPLHWVAQHNNSKETAEILI 297
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N ++ A TPLH A N E + L+ ++ +L A++ TPLH
Sbjct: 29 EILISNGADINAKDKDEA-TPLHWVANNNSKETAEILI----SNGADLNAKDKDEATPLH 83
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA++ E A++L+++GA I AK +G TPLH + Y+ R E T + L+ AD +A
Sbjct: 84 YAARDNSKETAEILISNGADINAKDEDGCTPLHYAARYN-RKE---TAEILISNGADLNA 139
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD + TPL H + S + E+L+
Sbjct: 140 KDKDEATPL-HCAARDNSKETAEILI 164
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ ++ ++ A++ TPLH A N E A++L+++GA
Sbjct: 14 TPLHYAARDNSKETAEILI----SNGADINAKDKDEATPLHWVANNNSKETAEILISNGA 69
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ AK + TPLH Y+ R T + L+ AD +AKD +G TPL
Sbjct: 70 DLNAKDKDEATPLH----YAARDNSKETAEILISNGADINAKDEDGCTPL 115
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G TPLH AA++ E A++L+++GA I AK + TPLH W + + T + L+
Sbjct: 12 GCTPLHYAARDNSKETAEILISNGADINAKDKDEATPLH---WVA-NNNSKETAEILISN 67
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AD +AKD + TPL H + S + E+L+
Sbjct: 68 GADLNAKDKDEATPL-HYAARDNSKETAEILI 98
>gi|403182585|gb|EJY57493.1| AAEL017480-PA, partial [Aedes aegypti]
Length = 333
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +Q+G L + L+ ++ +N TPLH ++ + E+VK L++ +
Sbjct: 46 LHFASQNGHLEVVKLLIDNRANVDTTQNE--EWTPLHYASRNGRLEVVKFLID----NGA 99
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ + G TPLH A++NG E KLL+ +GA ++ N G TPLH Y+ R+
Sbjct: 100 NVDTTDNEGWTPLHYASRNGHLEVVKLLIDNGANVDTTRNEGWTPLH----YASRNGRLE 155
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLS 163
VK +++ A+ DNEG TPL + S
Sbjct: 156 VVKFMIDNGANVDTTDNEGWTPLHYAS 182
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +++G L + L+ ++ RN TPLH ++ + E+VK +++ +
Sbjct: 112 LHYASRNGHLEVVKLLIDNGANVDTTRNE--GWTPLHYASRNGRLEVVKFMID----NGA 165
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ + G TPLH A++NG E K L+ +GA ++ N G TPLH Y+ R+
Sbjct: 166 NVDTTDNEGWTPLHYASRNGRLEVVKFLIDNGANVDTTQNEGWTPLH----YASRNGHLE 221
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
VK L++ A+ DNEG TPL
Sbjct: 222 VVKLLIDDEANVDTTDNEGWTPL 244
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 9 SRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLL 68
+R+ +H + +G L + L+ ++ +N TPLH ++ E+VK L+
Sbjct: 5 TRNEGWTPLHYASLNGHLEVVKLLIDNGANVDTTQNK--GWTPLHFASQNGHLEVVKLLI 62
Query: 69 EWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWY 128
+ ++ ++ TPLH A++NG E K L+ +GA ++ N G TPLH Y
Sbjct: 63 D----NRANVDTTQNEEWTPLHYASRNGRLEVVKFLIDNGANVDTTDNEGWTPLH----Y 114
Query: 129 SIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
+ R+ VK L++ A+ NEG TPL + S
Sbjct: 115 ASRNGHLEVVKLLIDNGANVDTTRNEGWTPLHYAS 149
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H +++G L + L+ + ++ N TPLH ++ E+VK L++ +
Sbjct: 211 LHYASRNGHLEVVKLLIDDEANVDTTDNE--GWTPLHDASLIGHLEVVKLLID----NGA 264
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ +N T LH+A++NG E KLL+ +GA ++ K G T LH++ R+
Sbjct: 265 NVDTKNTRRPTSLHIASQNGRLEVVKLLIDNGANVDTKNTRGSTSLHIAS----RNGHLE 320
Query: 137 TVKTLLEYNADCS 149
VK L++ A+
Sbjct: 321 VVKLLIDNGANVD 333
>gi|71981414|ref|NP_001021269.1| Protein UNC-44, isoform g [Caenorhabditis elegans]
gi|351065818|emb|CCD61799.1| Protein UNC-44, isoform g [Caenorhabditis elegans]
Length = 1004
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ EI +LL++ K + A++ G TPLH++A+ G E + LL+ +G+
Sbjct: 625 TPLHIAAKKNQMEIASTLLQF----KADPNAKSRAGFTPLHLSAQEGHKEISGLLIENGS 680
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+ AKANNG+T +HL ED+ V +L N A+ ++K N G TPL
Sbjct: 681 DVGAKANNGLTAMHLCAQ-----EDHVPVAQILYNNGAEINSKTNAGYTPL 726
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGY 58
+ N D+ + K T +H ++ G+L + LL R P + +N V TPLHV+A Y
Sbjct: 544 LDHNADKTLLTKKGFTPLHLASKYGNLEVVRLLLERGTPVDIEGKNQV---TPLHVAAHY 600
Query: 59 NKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNG 118
N ++ LLE + K A+N Y TPLH+AAK E A LL A AK+ G
Sbjct: 601 NNDKVAMLLLENGASAKAA--AKNGY--TPLHIAAKKNQMEIASTLLQFKADPNAKSRAG 656
Query: 119 MTPLHLSVWYSIRSEDYATVKTLL-EYNADCSAKDNEGKTPL 159
TPLHLS E + + LL E +D AK N G T +
Sbjct: 657 FTPLHLSAQ-----EGHKEISGLLIENGSDVGAKANNGLTAM 693
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 81/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D + + PA +H A+ D A LL+ NE NP + TPLH++A Y
Sbjct: 188 DSKGKVRLPA-LHIAAKKDDTTAATLLLQ------NEHNPDVTSKSGFTPLHIAAHYGHE 240
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ + LLE N + Q + +PLH+A K G A LLL+ GA I+++ + +TP
Sbjct: 241 NVGQLLLEKGAN----VNYQARHNISPLHVATKWGRTNMANLLLSRGAIIDSRTKDLLTP 296
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V L+ A SAK G PL H++ LL+H
Sbjct: 297 LHCAA----RSGHDQVVDLLVVQGAPISAKTKNGLAPL-HMAAQGDHVDAARTLLYH 348
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLHV+A IV LL+ N VE + GETPLH+AA+ + ++L+ +GA
Sbjct: 427 TPLHVAAFMGAINIVIYLLQQGANPDVE----TVRGETPLHLAARANQTDVVRVLIRNGA 482
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A+A TPLH++ R + V LL+ A+ +A + +PL H++ G
Sbjct: 483 KVDAQARELQTPLHIAS----RLGNTDIVILLLQAGANSNATTRDNYSPL-HIAAKEGQE 537
Query: 170 KLRELLLWHSEEQ 182
++ +LL H+ ++
Sbjct: 538 EVAGILLDHNADK 550
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH++A + E+ LL+ DK L + G TPLH+A+K G E +LLL G
Sbjct: 526 SPLHIAAKEGQEEVAGILLDHNA-DKTLLTKK---GFTPLHLASKYGNLEVVRLLLERGT 581
Query: 110 FIEAKANNGMTPLHLSVWYS------IRSEDYATVK-----------------------T 140
++ + N +TPLH++ Y+ + E+ A+ K T
Sbjct: 582 PVDIEGKNQVTPLHVAAHYNNDKVAMLLLENGASAKAAAKNGYTPLHIAAKKNQMEIAST 641
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ AD +AK G TPL HLS G ++ LL+
Sbjct: 642 LLQFKADPNAKSRAGFTPL-HLSAQEGHKEISGLLI 676
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 10 RSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE 69
R+ A+ A++GDL LLR + N N LH+++ +E+V+ L++
Sbjct: 30 RAEGSASFLRAARAGDLEKVLELLRAGTDI-NTSN-ANGLNSLHLASKEGHSEVVRELIK 87
Query: 70 WPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
+ +++A G T LH+A+ G + +L+ +GA + ++ NG TPL+++
Sbjct: 88 R----QAQVDAATRKGNTALHIASLAGQSLIVTILVENGANVNVQSVNGFTPLYMAA--- 140
Query: 130 IRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ VK LL++ A+ + +G TPL
Sbjct: 141 -QENHEEVVKYLLKHGANQALSTEDGFTPL 169
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + ++L N + +N + TPLHV+ + + +VK L+E +
Sbjct: 693 MHLCAQE-DHVPVAQILYNNGAEINSKTNA-GYTPLHVACHFGQLNMVKFLVE----NGA 746
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
++ + TPLH AA+ G N + LL +GA + G TPL ++
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNNCVRYLLENGASPNEQTATGQTPLSIA 795
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ ++ IV L+E N V Q++ G TPL+MAA+ E K LL HGA
Sbjct: 101 TALHIASLAGQSLIVTILVENGANVNV----QSVNGFTPLYMAAQENHEEVVKYLLKHGA 156
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D T TLL
Sbjct: 157 NQALSTEDGFTPLAVALQQGHDRVVAVLLENDSKGKVRLPALHIAAKKDDTTAATLLLQN 216
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N D ++K G TPL H++ G + +LLL
Sbjct: 217 EHNPDVTSK--SGFTPL-HIAAHYGHENVGQLLL 247
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T +H+ A + + + L N+ E+ ++ G TPLH+A G K L+ +GA
Sbjct: 691 TAMHLCAQEDHVPVAQILY----NNGAEINSKTNAGYTPLHVACHFGQLNMVKFLVENGA 746
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ K TPLH + + V+ LLE A + + G+TPL
Sbjct: 747 DVGEKTRASYTPLHQAAQQGHNN----CVRYLLENGASPNEQTATGQTPL 792
>gi|402302339|ref|ZP_10821456.1| ATPase, AAA family [Selenomonas sp. FOBRC9]
gi|400380845|gb|EJP33654.1| ATPase, AAA family [Selenomonas sp. FOBRC9]
Length = 680
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL-KVGARRPPHMA 247
E C+ K + +E + +VGL E+K +R + + R + G+ GA R HM
Sbjct: 391 ERCAARYDKTQTVYDEFNAMVGLGEVKEIVRNLIAAHKMRKLRASWGITDEGAAR--HMV 448
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
F GNPGT KT AR++ R+L G+LP + E R DLVG +VG T PK R +
Sbjct: 449 FTGNPGTAKTTTARLIARILEEEGVLPRCPLVECGRADLVGRYVGWTAPKVREKF 503
>gi|403727996|ref|ZP_10947874.1| hypothetical protein GORHZ_168_00020 [Gordonia rhizosphera NBRC
16068]
gi|403203639|dbj|GAB92205.1| hypothetical protein GORHZ_168_00020 [Gordonia rhizosphera NBRC
16068]
Length = 589
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
EA + E ++EL+ +GL +K Q+ K L + R GL A R H+AF
Sbjct: 286 EAVEAKPDLLKEAKDELNEQIGLGSVKEQVAKLESAATLAKLRVERGL-TSATRSQHLAF 344
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
G PGTGKT +ARI+ ++ +GIL TD V E R D VG+ +G T KT
Sbjct: 345 TGPPGTGKTTIARIVAKIYCALGILKTDEVIEASRRDFVGQHLGSTAIKT 394
>gi|326780558|ref|ZP_08239823.1| AAA ATPase central domain protein [Streptomyces griseus XylebKG-1]
gi|326660891|gb|EGE45737.1| AAA ATPase central domain protein [Streptomyces griseus XylebKG-1]
Length = 650
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 5/129 (3%)
Query: 183 RKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARR 242
RK A A A + E +L +VGL +K Q++ + + + R GL V +
Sbjct: 343 RKPPAFPAGPSDPALLAEALAQLERMVGLEPVKRQVKALSAQLNMARLRAEQGLPV---Q 399
Query: 243 PP--HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
PP H F G GTGKT VARILGR+ Y +G+L D + E QR+DLVGEF+G T K
Sbjct: 400 PPKRHFVFSGPSGTGKTTVARILGRVFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANE 459
Query: 301 RVGHLLSEI 309
+ L +
Sbjct: 460 LIDSALGGV 468
>gi|295835140|ref|ZP_06822073.1| sporulation protein K [Streptomyces sp. SPB74]
gi|295825335|gb|EFG64200.1| sporulation protein K [Streptomyces sp. SPB74]
Length = 824
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVG-ARRPPHMAFLGNPGTGKTMVARIL 263
L +VGL +K ++R + + RR+A GLK ARR H+ F G+PGTGKT VAR+
Sbjct: 565 LDALVGLDSVKREVRAMTDMIEVGRRRQAAGLKAASARR--HLVFTGSPGTGKTTVARLY 622
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVG 303
+L +G+L + EV R DLVGE +G T +T+ G
Sbjct: 623 AEILVALGVLEKGHLVEVSRVDLVGEHIGSTAIRTQEAFG 662
>gi|123425617|ref|XP_001306854.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121888451|gb|EAX93924.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 525
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 78/140 (55%), Gaps = 12/140 (8%)
Query: 40 LNERNPVMAQTPLHVSAGYNK-AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN 98
+NE++ A T LH AGYN EIV+ LL N ++ +N +G T LH AA C
Sbjct: 340 INEKDNYGA-TALH-KAGYNNNKEIVELLLSNGAN----IDEKNSFGRTTLHNAACYNCQ 393
Query: 99 EAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
E AKLLL+HGA I A+ N+G TPLH Y+ S VK LL A+ + KD +T
Sbjct: 394 EIAKLLLSHGANINARDNDGRTPLH----YATDSNRKEFVKLLLSQGANINEKDLNERTA 449
Query: 159 LDHLSNGPGSAKLRELLLWH 178
L H++ S ++ ELLL +
Sbjct: 450 L-HIAAANCSKEIVELLLSY 468
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 36 NPSLLNERNPVMAQTPLHVSAG--YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAA 93
N + +N +N + +T LH++ N EIV+ LL N + ++ YG T LH A
Sbjct: 301 NGANINAKN-IDGKTALHIATSKINNNKEIVELLLSHGAN----INEKDNYGATALHKAG 355
Query: 94 KNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDN 153
N E +LLL++GA I+ K + G T LH + Y+ + K LL + A+ +A+DN
Sbjct: 356 YNNNKEIVELLLSNGANIDEKNSFGRTTLHNAACYNCQE----IAKLLLSHGANINARDN 411
Query: 154 EGKTPLDHLSNGPGSAKLRELLL 176
+G+TPL H + + +LLL
Sbjct: 412 DGRTPL-HYATDSNRKEFVKLLL 433
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 7/117 (5%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAK--NGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ SL E+ + + A+N+ G+T LH+A N E +LLL+HGA I K N G T
Sbjct: 291 ISSLCEYFLLNGANINAKNIDGKTALHIATSKINNNKEIVELLLSHGANINEKDNYGATA 350
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + + + + V+ LL A+ K++ G+T L H + ++ +LLL H
Sbjct: 351 LHKAGY----NNNKEIVELLLSNGANIDEKNSFGRTTL-HNAACYNCQEIAKLLLSH 402
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 29 FQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETP 88
F +LL + +NE++ + +T LH++A EIV+ LL + K++ + +N G T
Sbjct: 428 FVKLLLSQGANINEKD-LNERTALHIAAANCSKEIVELLLSYDA--KIDEKDKN--GRTA 482
Query: 89 LHMAAKNGCNEAAKLLLAHGAFIEAK 114
LH+A KN + +LLL++ A I K
Sbjct: 483 LHIATKNCSKDIIELLLSYDANINEK 508
>gi|429200494|ref|ZP_19192182.1| ATPase, AAA family, partial [Streptomyces ipomoeae 91-03]
gi|428663806|gb|EKX63141.1| ATPase, AAA family, partial [Streptomyces ipomoeae 91-03]
Length = 601
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 340 GELDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 398
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 399 YGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 435
>gi|408356722|ref|YP_006845253.1| stage V sporulation protein K [Amphibacillus xylanus NBRC 15112]
gi|407727493|dbj|BAM47491.1| putative stage V sporulation protein K [Amphibacillus xylanus NBRC
15112]
Length = 772
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
+L +VGL ++K + ++ + + RK +G ++ HM GNPGTGKT +AR+L
Sbjct: 227 KLEGMVGLEQVKKYMNQYYHYLKYQQDRKQIGFQMIDEPGLHMIITGNPGTGKTTIARLL 286
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ + +G+L ++++ EV R+ LVG FVG + KT +
Sbjct: 287 AEIYHELGLLDSNKIIEVNRSHLVGSFVGQSEEKTMNYI 325
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 177 WHSEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGL 236
W + + + L ++ K ++ +E +L+ ++GL+ +K +++K + + + + RK G
Sbjct: 478 WLDHMRIESKDLAVMTDKKDDIEPIE-QLNQLIGLNNVKDEVKKLSSFVRIQQARKNQGY 536
Query: 237 KVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGP 296
+ H F GNPGTGKT VA+I +LL G+L R+DLV +VG T
Sbjct: 537 PTVPIQL-HAVFSGNPGTGKTTVAKIYSKLLKECGLLKRGHFIVASRSDLVAGYVGQTAI 595
Query: 297 KTRRRV 302
KT+ ++
Sbjct: 596 KTKNKI 601
>gi|397640511|gb|EJK74161.1| hypothetical protein THAOC_04179 [Thalassiosira oceanica]
Length = 410
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKT 257
D+L+ ++VGL +K ++++ A ++LD+ R+ LG + P HM+F G PGTGKT
Sbjct: 123 DQLDKLDRDLVGLVAVKKRVKEIAALLVLDKMRRKLGFETSV--PSLHMSFTGAPGTGKT 180
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VA +G++L +G V R DLVG++VGHT PKT+ +
Sbjct: 181 TVAVRMGQILAKMGYARRGHVVLATRDDLVGQYVGHTAPKTKEMI 225
>gi|123456425|ref|XP_001315948.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121898640|gb|EAY03725.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 513
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N V TPLH +A YN E + + + ++ A+N G TPLH
Sbjct: 333 EILISNGADINAKN-VAGCTPLHWAARYNSKETAEIFIS----NGADINAKNEDGCTPLH 387
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA N E A++L+++GA I AK +G TPLH W + + T + L+ AD +A
Sbjct: 388 WAANNNSKETAEILISNGADINAKNEDGCTPLH---W-AANNNSKETAEILISNGADINA 443
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD +G TPL + +N S + E+L+
Sbjct: 444 KDKDGCTPLHYAANN-NSKETAEILI 468
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDK 75
+ C++ + +F L + N+ N +P LH+S SLLE+ ++
Sbjct: 261 LESCSKYNNRQSFLVYLDQ----TNDINACFVYSPNLHLS----------SLLEYFISNG 306
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
++ A++ G TPLH AA N E A++L+++GA I AK G TPLH + Y+ +
Sbjct: 307 ADINAKDKDGCTPLHYAANNNSKETAEILISNGADINAKNVAGCTPLHWAARYNSKE--- 363
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
T + + AD +AK+ +G TPL H + S + E+L+
Sbjct: 364 -TAEIFISNGADINAKNEDGCTPL-HWAANNNSKETAEILI 402
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A++ G TPLH AA N E A++L+++GA
Sbjct: 417 TPLHWAANNNSKETAEILIS----NGADINAKDKDGCTPLHYAANNNSKETAEILISNGA 472
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
I AK G TPLH + Y+ + T + L+ AD +AKD
Sbjct: 473 DINAKNVAGCTPLHYAARYNCKE----TAEILISNGADINAKD 511
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+N+ G TPLH AA+ C E A++L+++GA
Sbjct: 450 TPLHYAANNNSKETAEILIS----NGADINAKNVAGCTPLHYAARYNCKETAEILISNGA 505
Query: 110 FIEAKANN 117
I AK N
Sbjct: 506 DINAKDKN 513
>gi|284991933|ref|YP_003410487.1| AAA ATPase central domain-containing protein [Geodermatophilus
obscurus DSM 43160]
gi|284065178|gb|ADB76116.1| AAA ATPase central domain protein [Geodermatophilus obscurus DSM
43160]
Length = 341
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ ++ EL +VGL +K Q++ + + RRK GL A H+ FLGNPGTGKT
Sbjct: 48 LSAVQAELDGLVGLETVKEQVQALVAFLQVQARRKTHGLPEVAT-SQHLVFLGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR+L + VG+L + EV R LVG++VG T KT R + L + +
Sbjct: 107 TVARLLAEMYRAVGLLQKGHLVEVDRAALVGQYVGATAIKTDRVIRRALDGVLFI 161
>gi|353328753|ref|ZP_08971080.1| ankyrin repeat domain protein, partial [Wolbachia endosymbiont
wVitB of Nasonia vitripennis]
Length = 580
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 17/156 (10%)
Query: 8 RSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSA--GYNKAEIV 64
R++ AT +H A+SG + L++ + ++ N + TPLHV+A GY
Sbjct: 434 RAKDKNNATPLHYAAESGHKAVAELLIKNGVEINDKANNNL--TPLHVAALKGY------ 485
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
K ++E +K E+ AQ++ G TPLH AA NG + LL+ + A + AKAN G+TPLH
Sbjct: 486 KDIIELLIRNKAEVRAQDIKGSTPLHAAAMNGSKDIIDLLIKNKAEVNAKANYGLTPLHA 545
Query: 125 SVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPL 159
+V ED+ V LL N A +A+ G TPL
Sbjct: 546 AVV-----EDHKDVVNLLIKNKAKVNAEGIAGSTPL 576
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 39 LLNERNPVMAQ----TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAK 94
L N+ N +A TPLH + +IV +LLE V + A++ TPLH AA+
Sbjct: 394 LTNKANASIATVEGITPLHFAVQSGHLKIVVALLEHG----VNIRAKDKNNATPLHYAAE 449
Query: 95 NGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE 154
+G A+LL+ +G I KANN +TPLH++ + ++ L+ A+ A+D +
Sbjct: 450 SGHKAVAELLIKNGVEINDKANNNLTPLHVAALKGYKD----IIELLIRNKAEVRAQDIK 505
Query: 155 GKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
G TPL H + GS + +LL+ + E +
Sbjct: 506 GSTPL-HAAAMNGSKDIIDLLIKNKAEVNAK 535
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 1 MQKNQDRRSRSAKP-ATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
++K D +RS T+H A+ L + +L +N + + Q+PLH++A Y
Sbjct: 127 LKKGADINARSINLWTTLHFAAKGPSLEIIKFVLNQNLDV--NVKDINGQSPLHIAAAYG 184
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
+ IV+ + G V ++ + G+T LH+AAKNG +A ++LL + A K G
Sbjct: 185 RKNIVEFFIGKTG---VYVDDLDNSGKTSLHIAAKNGHKDAVEILLKNNANTNTKDIAGF 241
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
+PLH Y+I++ K +LE A+ + G H++ G L LL +
Sbjct: 242 SPLH----YAIKNNHIDVAKIMLEKEANVDINETMGGFTSLHIAAESGYLGLVNFLLKNE 297
Query: 180 EEQRKRRALEAC 191
R E
Sbjct: 298 ANVNARNDKEGI 309
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 78/179 (43%), Gaps = 12/179 (6%)
Query: 7 RRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKS 66
R + P +H A +G L L+ + + N R + TPLH + +I
Sbjct: 303 RNDKEGIP--LHTAALNGHLEVVNALILKGADV-NSR-VIDGCTPLHYAIENGHEKIANI 358
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
LL+ + V Y TPLH AAK+G + K LL + A G+TPLH
Sbjct: 359 LLKHGAHVNV---VDKTYNNTPLHYAAKDGHEKIVKALLTNKANASIATVEGITPLH--- 412
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
++++S V LLE+ + AKD TPL H + G + ELL+ + E +
Sbjct: 413 -FAVQSGHLKIVVALLEHGVNIRAKDKNNATPL-HYAAESGHKAVAELLIKNGVEINDK 469
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D S K ++H A++G A + LL+ N + + +PLH + N ++ K
Sbjct: 201 DDLDNSGK-TSLHIAAKNGHKDAVEILLKNNAN--TNTKDIAGFSPLHYAIKNNHIDVAK 257
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+LE N + + M G T LH+AA++G LL + A + A+ + PLH +
Sbjct: 258 IMLEKEANVDIN---ETMGGFTSLHIAAESGYLGLVNFLLKNEANVNARNDKEGIPLHTA 314
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ V L+ AD +++ +G TPL H + G K+ +LL H
Sbjct: 315 AL----NGHLEVVNALILKGADVNSRVIDGCTPL-HYAIENGHEKIANILLKH 362
>gi|323350530|ref|ZP_08086192.1| hypothetical protein HMPREF9398_0240 [Streptococcus sanguinis
VMC66]
gi|322123212|gb|EFX94897.1| hypothetical protein HMPREF9398_0240 [Streptococcus sanguinis
VMC66]
Length = 630
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARI 262
EL +VGL +K + + + +RR + RP H F G GTGKT+VAR+
Sbjct: 349 ELDRLVGLSTVKSLIHRILDYFSISQRR--FEINSSPVRPSMHFMFSGASGTGKTIVARL 406
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
L ++ Y GI+ ++ + EV R+DL+GE+VG T PK +R
Sbjct: 407 LAKIFYEHGIIKSNVLIEVGRSDLIGEYVGQTAPKVKR 444
>gi|303324768|pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
gi|303324769|pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
gi|303324770|pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N ++ TPLH++A EIV+ LL+ + + A++ G TPLH
Sbjct: 19 RILMANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAGAD----VNAKDKDGYTPLH 73
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+ G E ++LL GA + AK +G TPLHL+ R V+ LL+ AD +A
Sbjct: 74 LAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA----REGHLEIVEVLLKAGADVNA 129
Query: 151 KDNEGKTPLD 160
+D GKTP D
Sbjct: 130 QDKFGKTPFD 139
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A++ G TPLH+AA+ G E ++LL GA + AK +G TPLHL+ R
Sbjct: 27 DVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA----REGHLE 82
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL+ AD +AKD +G TPL HL+ G ++ E+LL
Sbjct: 83 IVEVLLKAGADVNAKDKDGYTPL-HLAAREGHLEIVEVLL 121
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + AK +G TPLHL+ R V+ LL+ AD +AK
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAA----REGHLEIVEVLLKAGADVNAK 64
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D +G TPL HL+ G ++ E+LL
Sbjct: 65 DKDGYTPL-HLAAREGHLEIVEVLL 88
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L + LL+ + N ++ TPLH++A EIV+ LL+ +
Sbjct: 39 LHLAAREGHLEIVEVLLKAGADV-NAKDK-DGYTPLHLAAREGHLEIVEVLLKAGAD--- 93
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ A++ G TPLH+AA+ G E ++LL GA + A+ G TP L++ ED A
Sbjct: 94 -VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREG--HEDIA 150
Query: 137 TV 138
V
Sbjct: 151 EV 152
>gi|403066587|ref|YP_006639076.1| cfxQ-like protein (chloroplast) [Saccharina japonica]
gi|378787500|gb|AFC40130.1| cfxQ-like protein (chloroplast) [Saccharina japonica]
Length = 300
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
++ K +D LE EL VGL +K ++++ + +++D+ R+ LG G P HM+F G
Sbjct: 25 TQIKTIIDILEEEL---VGLIPVKTRIQEISALLVIDKLRENLGFTTG--NPGLHMSFTG 79
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+PGTGKT VA + +L+ +G + V R DLVG+++GHT PKT+
Sbjct: 80 SPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTK 128
>gi|408676750|ref|YP_006876577.1| putative CbxX or CfqX family protein [Streptomyces venezuelae ATCC
10712]
gi|328881079|emb|CCA54318.1| putative CbxX or CfqX family protein [Streptomyces venezuelae ATCC
10712]
Length = 656
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILG 264
+VGL +K Q++ + + + R GL V +PP H F G GTGKT VARILG
Sbjct: 371 GMVGLEPVKRQVKALSAQLEMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVARILG 427
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
R+ Y +G+L D + E QR DLVGEF+G T K
Sbjct: 428 RVFYALGLLGGDHLVEAQRADLVGEFLGQTAVKA 461
>gi|284989946|ref|YP_003408500.1| AAA ATPase central domain-containing protein [Geodermatophilus
obscurus DSM 43160]
gi|284063191|gb|ADB74129.1| AAA ATPase central domain protein [Geodermatophilus obscurus DSM
43160]
Length = 341
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ ++ EL +VGL +K Q++ + + RRK GL A H+ FLGNPGTGKT
Sbjct: 48 LSAVQAELDGLVGLETVKEQVQALVAFLQVQARRKTHGLPEVAT-SQHLVFLGNPGTGKT 106
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
VAR+L + VG+L + EV R LVG++VG T KT R + L + +
Sbjct: 107 TVARLLAEMYRAVGLLQKGHLVEVDRAALVGQYVGATAIKTDRVIRRALDGVLFI 161
>gi|157150874|ref|YP_001451110.1| CbxX/CfqX family protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075668|gb|ABV10351.1| cbxX/cfqX family protein [Streptococcus gordonii str. Challis
substr. CH1]
Length = 950
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 4/110 (3%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
SE + K D LE EL++++GL ++K +++K + +++R A G K ++ H AF+GN
Sbjct: 390 SEQETKRDALE-ELNSLIGLEKVKHEIKKMINMVEFNKKRIANG-KAPEKQTLHAAFMGN 447
Query: 252 PGTGKTMVARILGRLLYMVGILPTD--RVTEVQRTDLVGEFVGHTGPKTR 299
PGTGKT VAR+LG +L+ G+L R E +DL+ VG T +T+
Sbjct: 448 PGTGKTTVARLLGEVLFEAGVLSGKEFRFVEATESDLISSNVGGTAEQTQ 497
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+ +VG+ ++K Q+ ++ +++R G V H FLGNPGTGKT VARILG
Sbjct: 678 LNRLVGIAKVKEQVEQFVAMAEFNQKRAEQGGLV-EDTTLHSLFLGNPGTGKTTVARILG 736
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+L+ G++ + EV R +LVG + G T KT
Sbjct: 737 NILFQKGVIKQKKFIEVSRINLVGGYQGQTALKT 770
>gi|123385612|ref|XP_001299144.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121879918|gb|EAX86214.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 429
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Query: 32 LLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHM 91
L+ +PS+ ++ +T LH+ A N E V+ +L N + +N GET LH+
Sbjct: 138 LISHSPSI--DKKDEYGETALHLVAYGNSKETVELILSHGAN----INEKNKKGETALHI 191
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA N E +LLL+HGA I K G T LHL+ + + + TV+ L+ + A+ + K
Sbjct: 192 AASNNSKETVELLLSHGANINEKDEYGETALHLAAYGNSKE----TVELLVSHGANINEK 247
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWH 178
DNEG+T L+H + G + + E + H
Sbjct: 248 DNEGRTVLNHAAYG-NNKETAEFFISH 273
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ QT H +A YN + + L N + ++ G T LH+AA++ E
Sbjct: 310 INEKDN-NGQTAFHHAAHYNSQKTAELLFSHGAN----INEKDNKGRTALHIAARHSRKE 364
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
AK LL+ GA I K NNG TPLH + Y + Y T K L+ A+ + KDN+GKT L
Sbjct: 365 TAKFLLSKGANITEKDNNGRTPLHHTARYESQ---YKTAKFLISQGANINEKDNDGKTTL 421
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N +T LH +A N E + LL + N + ++ G+T H AA +
Sbjct: 277 INEKNN-NGETALHHAANCNSKETAELLLSYGAN----INEKDNNGQTAFHHAAHYNSQK 331
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL +HGA I K N G T LH++ +S R E T K LL A+ + KDN G+TPL
Sbjct: 332 TAELLFSHGANINEKDNKGRTALHIAARHS-RKE---TAKFLLSKGANITEKDNNGRTPL 387
Query: 160 DHLSNGPGSAKLRELLL 176
H + K + L+
Sbjct: 388 HHTARYESQYKTAKFLI 404
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 10/137 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+N +T LH++A N E V+ LL N + ++ YGET LH+AA E
Sbjct: 178 INEKNK-KGETALHIAASNNSKETVELLLSHGAN----INEKDEYGETALHLAAYGNSKE 232
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+LL++HGA I K N G T L+ + + + T + + + A+ + K+N G+T L
Sbjct: 233 TVELLVSHGANINEKDNEGRTVLNHAAY----GNNKETAEFFISHGANINEKNNNGETAL 288
Query: 160 DHLSNGPGSAKLRELLL 176
H +N S + ELLL
Sbjct: 289 HHAAN-CNSKETAELLL 304
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ H + G NK E + + N + +N GET LH
Sbjct: 235 ELLVSHGANINEKDNEGRTVLNHAAYGNNK-ETAEFFISHGAN----INEKNNNGETALH 289
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA E A+LLL++GA I K NNG T H + Y+ + T + L + A+ +
Sbjct: 290 HAANCNSKETAELLLSYGANINEKDNNGQTAFHHAAHYNSQK----TAELLFSHGANINE 345
Query: 151 KDNEGKTPL 159
KDN+G+T L
Sbjct: 346 KDNKGRTAL 354
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH +A +N E + L+ N ++ Q+ + TPL AA+ E A+LL+++GA
Sbjct: 21 TALHSAACFNSKETAEFLILHGAN----IDQQDRFEGTPLFYAAQYNNKETAELLISYGA 76
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCS 149
+I +NG T L+++V +S TV+ LL ++AD S
Sbjct: 77 YINEGCHNGETALYIAV----KSNSKETVELLLSHDADIS 112
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T L+++ N E V+ LL D +L + T LH+AA E +LL++H
Sbjct: 86 ETALYIAVKSNSKETVELLLSHDA-DISKLYHHML--RTILHVAALWSYREIVELLISHS 142
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
I+ K G T LHL V Y E TV+ +L + A+ + K+ +G+T L H++ S
Sbjct: 143 PSIDKKDEYGETALHL-VAYGNSKE---TVELILSHGANINEKNKKGETAL-HIAASNNS 197
Query: 169 AKLRELLLWH 178
+ ELLL H
Sbjct: 198 KETVELLLSH 207
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ +T LH++A +++ E K LL N + ++ G TPLH
Sbjct: 334 ELLFSHGANINEKDN-KGRTALHIAARHSRKETAKFLLSKGAN----ITEKDNNGRTPLH 388
Query: 91 MAAKNGCN-EAAKLLLAHGAFIEAKANNGMTPL 122
A+ + AK L++ GA I K N+G T L
Sbjct: 389 HTARYESQYKTAKFLISQGANINEKDNDGKTTL 421
>gi|318081764|ref|ZP_07989075.1| ATPase [Streptomyces sp. SA3_actF]
Length = 340
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILG 264
+VGL +K Q+R + + + R GL V +PP H F G GTGKT VARILG
Sbjct: 57 QMVGLEPVKRQVRALSAQLNMARLRAEQGLPV---QPPKRHFIFSGPSGTGKTTVARILG 113
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
R+ Y +G+L D + E QR+DLVGE++G T K + L +
Sbjct: 114 RVFYALGLLGGDHLVEAQRSDLVGEYLGQTAVKANELIDSALGGV 158
>gi|386387650|ref|ZP_10072637.1| ATPase AAA, partial [Streptomyces tsukubaensis NRRL18488]
gi|385664898|gb|EIF88654.1| ATPase AAA, partial [Streptomyces tsukubaensis NRRL18488]
Length = 329
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VG+ +K Q++ + + + R GL V +PP H F G GTGKT VARILGR
Sbjct: 48 MVGMEPVKRQVKALSAQLEMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVARILGR 104
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 105 VFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 148
>gi|377571988|ref|ZP_09801088.1| hypothetical protein GOTRE_149_00290 [Gordonia terrae NBRC 100016]
gi|377530849|dbj|GAB46253.1| hypothetical protein GOTRE_149_00290 [Gordonia terrae NBRC 100016]
Length = 593
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E + + E + EL+ +GL +K Q+ K L + R GL AR H+AF G P
Sbjct: 296 EQSSLVTEAQRELAEQIGLDSVKQQVAKLQSTATLAKVRADRGLSTSAR-SLHLAFTGPP 354
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
GTGKT VARI+ ++ +G + +D+V E R D+VGE +G T KT
Sbjct: 355 GTGKTTVARIVAKIYCGLGFIKSDKVVEATRRDMVGEHLGSTAIKT 400
>gi|377575715|ref|ZP_09804704.1| hypothetical protein MOPEL_135_01070 [Mobilicoccus pelagius NBRC
104925]
gi|377535558|dbj|GAB49869.1| hypothetical protein MOPEL_135_01070 [Mobilicoccus pelagius NBRC
104925]
Length = 570
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E + ++EL EL + GL +K ++ + + +D R+ GL+ A H+ F+GNP
Sbjct: 275 EPEKSVEELLAELDALTGLRRVKREVHQQVAMLKVDAMRREAGLR-SASMTRHLVFVGNP 333
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
GTGKT VAR++G + + +G+L T ++ EV R++LV ++G T KT V S I +
Sbjct: 334 GTGKTTVARLVGGIYHALGLLSTGQLVEVDRSELVAGYLGQTAVKTSEIVA---SAIGGV 390
Query: 313 TFI 315
FI
Sbjct: 391 LFI 393
>gi|123492832|ref|XP_001326156.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121909066|gb|EAY13933.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 377
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ V +T LH++ G N EI + L+ + + ++ +G+T LH +A+N E
Sbjct: 12 INEKDEV-GKTALHIATGNNSKEIAEFLISHD----ININEKDNFGQTALHNSAENNSKE 66
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+LL++HGA I K +G T LH + Y+ + + L+ + + + KD++G+T L
Sbjct: 67 TAELLISHGANINEKDYDGKTALHFAAIYNSK----GIAEVLISHGININEKDSDGRTAL 122
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ S + ELL+ H
Sbjct: 123 -HIAVSENSKETAELLISH 140
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+ +T LH +A YN I + L+ + + ++ G T LH
Sbjct: 69 ELLISHGANINEK-DYDGKTALHFAAIYNSKGIAEVLISHG----ININEKDSDGRTALH 123
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+A E A+LL++HGA I K NG T LH + Y E + L+ + + +
Sbjct: 124 IAVSENSKETAELLISHGANINEKDYNGNTALHFAALY----ESKEAAELLISHGININE 179
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KDN+GKT L H + ++ ELL+
Sbjct: 180 KDNDGKTAL-HYAANKNYEEIVELLI 204
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH +A N EIV+ L+ + + + ++ G+T LH AA E
Sbjct: 177 INEKDN-DGKTALHYAANKNYEEIVELLIS----NGININEKDNDGKTALHYAANENYEE 231
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
AKLL+++G I K N+G T LHL+ SI T K L+ + + KDN+GKT L
Sbjct: 232 TAKLLISNGININEKDNDGKTALHLAT--SILC--IKTAKLLISNCVNINEKDNDGKTTL 287
Query: 160 DHLS--NGPGSAKL 171
H + N +AKL
Sbjct: 288 HHAARYNSNKTAKL 301
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V + ++ G+T LH AA+ N+ AKLL+++G I K N+G T LH + ++Y
Sbjct: 274 VNINEKDNDGKTTLHHAARYNSNKTAKLLISNGININEKDNDGKTALHYAA-----DKNY 328
Query: 136 ATVKTLLEYNA-DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ LL N + + KDN+GKT L H++ S ++ ELL+ H
Sbjct: 329 EEIVELLISNGININEKDNDGKTTL-HIAVSENSKEIAELLISH 371
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE+ T LH +A Y E + L+ + + ++ G+T LH
Sbjct: 135 ELLISHGANINEK-DYNGNTALHFAALYESKEAAELLISHG----ININEKDNDGKTALH 189
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY-ATVKTLLEYNADCS 149
AA E +LL+++G I K N+G T LH + +E+Y T K L+ + +
Sbjct: 190 YAANKNYEEIVELLISNGININEKDNDGKTALHYAA-----NENYEETAKLLISNGININ 244
Query: 150 AKDNEGKTPLDHLSNGPGSAKLRELLL 176
KDN+GKT L HL+ K +LL+
Sbjct: 245 EKDNDGKTAL-HLATSILCIKTAKLLI 270
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+ + ++ G+T LH+A N E A+ L++H I K N G T LH S + +
Sbjct: 10 ININEKDEVGKTALHIATGNNSKEIAEFLISHDININEKDNFGQTALHNSAENNSKE--- 66
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH-----SEEQRKRRALE- 189
T + L+ + A+ + KD +GKT L H + S + E+L+ H ++ R AL
Sbjct: 67 -TAELLISHGANINEKDYDGKTAL-HFAAIYNSKGIAEVLISHGININEKDSDGRTALHI 124
Query: 190 ACSETKAKMDEL 201
A SE + EL
Sbjct: 125 AVSENSKETAEL 136
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL N +NE++ +T LH +A N EIV+ L+ + + + ++ G+T LH
Sbjct: 300 KLLISNGININEKDN-DGKTALHYAADKNYEEIVELLIS----NGININEKDNDGKTTLH 354
Query: 91 MAAKNGCNEAAKLLLAHGAFI 111
+A E A+LL++HG I
Sbjct: 355 IAVSENSKEIAELLISHGINI 375
>gi|383648499|ref|ZP_09958905.1| sporulation protein K-like protein [Streptomyces chartreusis NRRL
12338]
Length = 813
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 552 GELDALVGLESVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 610
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 611 YGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 647
>gi|378824474|ref|YP_005089644.1| cbbX gene product (chloroplast) [Synedra acus]
gi|371572673|gb|AEX37769.1| Rubisco expression protein CbbX (chloroplast) [Synedra acus]
Length = 289
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 4/110 (3%)
Query: 190 ACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFL 249
A +E ++ L EL VGL +K ++R+ A +L+D+ R+++G+ A HM+F
Sbjct: 13 AKTEISKILNILNQEL---VGLAPVKSRIREIAALLLIDKLRQSVGI-TAANPGLHMSFT 68
Query: 250 GNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G+PGTGKT V + +L+ +G + V R DLVG+++GHT PKT+
Sbjct: 69 GSPGTGKTTVGLKMADILFQLGYSKKGHLLTVTRDDLVGQYIGHTAPKTK 118
>gi|148284629|ref|YP_001248719.1| ankyrin repeat-containing protein [Orientia tsutsugamushi str.
Boryong]
gi|146740068|emb|CAM80199.1| ankyrin repeat protein with 8 ankyrin repeats [Orientia
tsutsugamushi str. Boryong]
Length = 495
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 24 GDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM 83
GD+ A +L NP L+N + +TPLH S ++EI K LLE N + Q+
Sbjct: 12 GDVKAVLDILNTNPGLVNFQQDGDFKTPLHTSVENKQSEITKVLLERNAN----VTLQDK 67
Query: 84 YGETPLHMAAKNGCNEAAKLLLAHG-AFIEAKANNGMTPLHLSVWYS---------IRSE 133
G PLH AA++ + LL++G A ++ + NNG TPLHL+ + +E
Sbjct: 68 DGNAPLHFAARDHNLRMTETLLSYGNAIVDIQNNNGQTPLHLASTRPRTYQGPSDLLSTE 127
Query: 134 DYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ LL + A + +D+ G T L + +N ++ E+LL H
Sbjct: 128 SLKIAQALLTHGAKVNLQDDNGNTALHYATNSFHHLEITEILLNH 172
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 50 TPLHVSA-GYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
T LH + ++ EI + LL N + AQN G+T LH AAKNG LL G
Sbjct: 151 TALHYATNSFHHLEITEILLNHGAN----VNAQNNLGDTALHRAAKNGLLPTVVCLLKSG 206
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
A + K NG + LH + R + VK +L + AD +A++N+G TPL H
Sbjct: 207 ANVHLKGENGNSVLHCAAQQG-RGPNEKIVKAVLHHGADVNARNNDGSTPLHH 258
>gi|411004737|ref|ZP_11381066.1| hypothetical protein SgloC_18165 [Streptomyces globisporus C-1027]
Length = 809
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR GLK + R H+ F G+PGTGKT VAR+
Sbjct: 547 GELDALVGLESVKREVRALTDMIEVGRRRAEAGLKAASVRR-HLVFTGSPGTGKTTVARL 605
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 606 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 642
>gi|330038677|ref|XP_003239667.1| CbbX protein [Cryptomonas paramecium]
gi|327206591|gb|AEA38769.1| CbbX protein [Cryptomonas paramecium]
Length = 343
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 189 EACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMA 247
+ E K+DE +++GL +K Q+++ A +++D+ R+ LGL P HM
Sbjct: 55 DGVKEILKKLDE------DLIGLKPVKDQVKEIAALLVVDKLRRNLGLDTSV--PSLHMC 106
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
F G+PGTGKT VA +G++L +G + + R DLVG+++GHT PKT+ +
Sbjct: 107 FTGSPGTGKTTVAMRMGQILQRMGYSRSGHLVLATRDDLVGQYIGHTAPKTKEVI 161
>gi|170588307|ref|XP_001898915.1| Uncoordinated protein 44, isoform e [Brugia malayi]
gi|158593128|gb|EDP31723.1| Uncoordinated protein 44, isoform e, putative [Brugia malayi]
Length = 1896
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N+ +I +LL + N E +A G TPLH++A+ G E A LL+ +GA
Sbjct: 645 TPLHIAAKKNQMDIASTLLHYRANANAESKA----GFTPLHLSAQEGHREMAALLIENGA 700
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATV-KTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
+ A+A NG+TP+HL ED V + L++ NA +K G TPL H++ G
Sbjct: 701 KVGAQARNGLTPMHLCA-----QEDRVNVAEELVKENAATDSKTKAGYTPL-HVACHFGQ 754
Query: 169 AKLRELLLWH 178
+ L+ H
Sbjct: 755 INMVRFLIEH 764
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y + K LLE V++E +N TPLH+AA ++ A LLL GA
Sbjct: 579 TPLHLAAKYGNLPVAKLLLER--GTLVDIEGKNQV--TPLHVAAHYNNDKVALLLLESGA 634
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
A A NG TPLH++ + TLL Y A+ +A+ G TPL HLS G
Sbjct: 635 SAHAVAKNGYTPLHIAA----KKNQMDIASTLLHYRANANAESKAGFTPL-HLSAQEGHR 689
Query: 170 KLRELLL 176
++ LL+
Sbjct: 690 EMAALLI 696
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D R + PA +H A+ D A LL+ NE N + TPLH++A Y
Sbjct: 208 DTRGKVRLPA-LHIAAKKDDTKAATLLLQ------NEHNSDVTSKSGFTPLHIAAHYGNE 260
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
+ LLE N + Q + +PLH+A K G LLLAHGA I+ + + +TP
Sbjct: 261 NVALLLLEKGAN----VNYQARHNISPLHVATKWGRANMVSLLLAHGAVIDCRTRDLLTP 316
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS V LLE A +AK G PL + G R +LL+H
Sbjct: 317 LHCAS----RSGHDQVVDLLLEKGAPINAKTKNGLAPLHMAAQGDHVDSAR-ILLYH 368
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 42/175 (24%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLHV+ + +A +V LL ++ +++ TPLH A+++G ++ LLL GA
Sbjct: 282 SPLHVATKWGRANMVSLLLAHGA--VIDCRTRDLL--TPLHCASRSGHDQVVDLLLEKGA 337
Query: 110 FIEAKANNGMTPLHLS-----------VWYSIRSEDYATV------------------KT 140
I AK NG+ PLH++ + Y D TV K
Sbjct: 338 PINAKTKNGLAPLHMAAQGDHVDSARILLYHRAPVDDVTVDYLTPLHVAAHCGHVRVAKL 397
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL-WHSEEQRKRRALEACSET 194
LL+ NAD +A+ G TPL H++ K+ ELLL +H+ A+EA +E+
Sbjct: 398 LLDRNADSNARALNGFTPL-HIACKKNRIKVVELLLKYHA-------AIEATTES 444
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 9/133 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLHV+A IV LL+ N V + GETPLH+AA+ + ++L+ +GA
Sbjct: 447 SPLHVAAFMGAINIVIYLLQQGANANV----ATVRGETPLHLAARANQTDIVRVLVRNGA 502
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++A A TPLH++ R + V LL+ A +A + TPL H++ G
Sbjct: 503 QVDAAARELQTPLHIAS----RLGNTDIVILLLQAGASPNAATRDLYTPL-HIAAKEGQE 557
Query: 170 KLRELLLWHSEEQ 182
++ +L+ H ++
Sbjct: 558 EVAAILIDHGSDK 570
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ + + L++EN + + TPLHV+ + + +V+ L+E
Sbjct: 713 MHLCAQEDRVNVAEELVKENAA--TDSKTKAGYTPLHVACHFGQINMVRFLIEH----GA 766
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+ A TPLH AA+ G N + LL HGA + + G TPL ++
Sbjct: 767 PVSATTRASYTPLHQAAQQGHNNVVRYLLEHGASPNVQTSTGQTPLSIA 815
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TP+H+ A ++ + + L++ + +++ G TPLH+A G + L+ HGA
Sbjct: 711 TPMHLCAQEDRVNVAEELVK----ENAATDSKTKAGYTPLHVACHFGQINMVRFLIEHGA 766
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ A TPLH + + V+ LLE+ A + + + G+TPL
Sbjct: 767 PVSATTRASYTPLHQAAQQGHNN----VVRYLLEHGASPNVQTSTGQTPL 812
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH+++ E+V+ LL+ K +++A G T LH+A+ G +L+ + A +
Sbjct: 90 LHLASKEGHHEVVRELLKR----KADVDAATKKGNTALHIASLAGQELIVTILVENDANV 145
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
++ NG TPL+++ + S V+ LL ++A+ + +G TPL
Sbjct: 146 NVQSLNGFTPLYMAAQENHES----VVRYLLAHSANQALATEDGFTPL 189
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 34/154 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH+++ + IV L+E N V Q++ G TPL+MAA+ + LLAH A
Sbjct: 121 TALHIASLAGQELIVTILVENDANVNV----QSLNGFTPLYMAAQENHESVVRYLLAHSA 176
Query: 110 FIEAKANNGMTPL------------------------HLSVWYSIRSEDYATVKTLL--- 142
+G TPL L + +D TLL
Sbjct: 177 NQALATEDGFTPLAVALQQGHDRVVALLLENDTRGKVRLPALHIAAKKDDTKAATLLLQN 236
Query: 143 EYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
E+N+D ++K G TPL H++ G+ + LLL
Sbjct: 237 EHNSDVTSK--SGFTPL-HIAAHYGNENVALLLL 267
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWP--GN-DKV--------ELEAQNMYGETPLHMAAKNGC 97
Q P S NK E S L GN D+V ++ N G LH+A+K G
Sbjct: 39 QVPSDNSQHSNKGESSASFLRAARAGNLDRVLELLRLGTDINTCNANGLNALHLASKEGH 98
Query: 98 NEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKT 157
+E + LL A ++A G T LH++ S+ ++ V L+E +A+ + + G T
Sbjct: 99 HEVVRELLKRKADVDAATKKGNTALHIA---SLAGQEL-IVTILVENDANVNVQSLNGFT 154
Query: 158 PLDHLSNGPGSAKLRELLLWHSEEQ 182
PL +++ + LL HS Q
Sbjct: 155 PL-YMAAQENHESVVRYLLAHSANQ 178
>gi|347534869|ref|YP_004841539.1| protein cfxQ-like protein [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504925|gb|AEN99607.1| Protein cfxQ-like protein [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 349
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARIL 263
EL + GL E K Q++ +++ R+ GLK A HM F+G+PGTGKT VA++
Sbjct: 82 ELDELTGLDEAKKQIKDMIAIAKINQLREERGLKTPAGISKHMVFVGDPGTGKTTVAKLF 141
Query: 264 GRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
G +L I+ ++ R+DLVG + G T +T++ + L I +
Sbjct: 142 GTILAQNKIISENKFVSTDRSDLVGHYTGTTADRTKKVIESALGGILFI 190
>gi|123974905|ref|XP_001314059.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896082|gb|EAY01244.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 662
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+LL + +NE N LHV++ E+VK + + ++++++ G T LH
Sbjct: 314 KLLVSKGASINEVNE-DGNNYLHVASMLGFNELVKMFISYG----IDVDSKGKKGCTSLH 368
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A N + A++LL HGA I+ G TP+H YS+R + K LL++NAD +
Sbjct: 369 FTALNNLPDTAQILLQHGADIDIGDVEGKTPIH----YSVRQSNKEICKFLLQHNADVNR 424
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
KD EGKT L H+S K LLL H KR
Sbjct: 425 KDIEGKTAL-HISAKNADTKFTNLLLAHGANINKR 458
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 47/173 (27%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
V +TP+H S + EI K LL+ ++ +++ G+T LH++AKN + LLL
Sbjct: 394 VEGKTPIHYSVRQSNKEICKFLLQH----NADVNRKDIEGKTALHISAKNADTKFTNLLL 449
Query: 106 AHGAFIEAKANNGMTPLHLSV-----WY-------------------------------- 128
AHGA I + NG TPL +++ WY
Sbjct: 450 AHGANINKRDKNGETPLFIAIQPYHDWYFLPAGSDDDDFQPNFRNQSKSLSQSKPLGQSK 509
Query: 129 ---SIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
I+S+ + V+ L+ ADC+ K+ G P+ H S ++ ELL+ H
Sbjct: 510 SVNKIKSKKF--VEFLISRGADCNVKNKSGYAPI-HDSTYNNIPEVIELLVSH 559
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 22/116 (18%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
P+H S N E+++ L+ V++ N G T H+A+ C ++ ++L+ HGA
Sbjct: 540 PIHDSTYNNIPEVIELLVSHG----VDINCTNDEGNTSAHIASACCCMKSLEVLIKHGAN 595
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLE-------YNADCSAKDNEGKTPL 159
+ K G+T LH YA+V+ LE + AD +A + TPL
Sbjct: 596 VNIKNAKGITALH-----------YASVEIFLEMVQLLIAHGADINANNQNKITPL 640
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 37 PSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNG 96
P+ N+ + PL S NK + K +E+ + + +N G P+H + N
Sbjct: 490 PNFRNQSKSLSQSKPLGQSKSVNKIK-SKKFVEFLISRGADCNVKNKSGYAPIHDSTYNN 548
Query: 97 CNEAAKLLLAHGAFIEAKANNGMTPLHL-SVWYSIRSEDYATVKTLLEYNADCSAKDNEG 155
E +LL++HG I + G T H+ S ++S ++ L+++ A+ + K+ +G
Sbjct: 549 IPEVIELLVSHGVDINCTNDEGNTSAHIASACCCMKS-----LEVLIKHGANVNIKNAKG 603
Query: 156 KTPLDHLSNGPGSAKLRELLLWH 178
T L H ++ ++ +LL+ H
Sbjct: 604 ITAL-HYASVEIFLEMVQLLIAH 625
>gi|383760929|ref|YP_005439912.1| hypothetical protein SELR_pSRC102410 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381368227|dbj|BAL85048.1| hypothetical protein SELR_pSRC102410 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 700
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGN 251
S K++ E EL+ +VGL +K + L ++RK GL G PHM F GN
Sbjct: 408 SSVKSRSSAYE-ELNQLVGLDNVKSLVNSILAFSKLQKQRKKAGLPAGGN-APHMVFFGN 465
Query: 252 PGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRR 301
PG+ KT VAR+L R+L IL D E R DLVG+FVG T ++
Sbjct: 466 PGSAKTTVARLLARILSDEQILQGDIFVECGRQDLVGQFVGWTAKTVEKK 515
>gi|123444605|ref|XP_001311071.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121892867|gb|EAX98141.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 1247
Score = 73.9 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT LH +A N+ E ++ L+ N + ++ G+T +H AAKN E A+ L++H
Sbjct: 637 GQTALHYAAKNNRKEYIEFLISHGAN----INEKDNNGQTAIHYAAKNNSKETAEFLISH 692
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K NNG T LH++V ++ T + L+ + A+ + KDN GKT L H +
Sbjct: 693 GANINEKGNNGQTALHIAV----KNNYIETAEFLISHGANINEKDNNGKTAL-HYAAWKD 747
Query: 168 SAKLRELLLWH 178
S + E L+ H
Sbjct: 748 SKETVEFLISH 758
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT LH +A N+ E + L+ N + ++ G+T LH AAKN NE A+ L++H
Sbjct: 1132 GQTALHYAAKNNRNETAEFLISHGAN----INEKDNNGQTALHYAAKNNRNETAEFLISH 1187
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
GA I K NNG T LH Y+ + TV+ L+ + A+ + KD +GKT L +
Sbjct: 1188 GANINEKDNNGQTALH----YAAENNRNETVELLISHGANINEKDKDGKTALHY 1237
Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ ++ +T +H++A N E + L+ N + ++ G+T +H+AA+N E
Sbjct: 927 INEKD-ILGETAIHIAAENNSKETAEFLISHGAN----INEKDNNGQTAIHIAAENNRKE 981
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ L++HGA I K NNG T LH + W + TV+ L+ + A+ + KD GKT L
Sbjct: 982 TAEFLISHGANINEKDNNGKTALHYAAW----KDSKETVEFLISHGANINEKDVYGKTAL 1037
Query: 160 DHLSNGPGSAKLRELLLWH 178
H + S + E+L+ H
Sbjct: 1038 -HYAAWKDSKETAEVLISH 1055
Score = 71.6 bits (174), Expect = 4e-10, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ QT LH +A EI + L+ N + ++ G+T LH AAKN NE
Sbjct: 1092 INEKDE-YGQTALHNAANNYSTEIAEFLISHGAN----INEKDNNGQTALHYAAKNNRNE 1146
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ L++HGA I K NNG T LH Y+ ++ T + L+ + A+ + KDN G+T L
Sbjct: 1147 TAEFLISHGANINEKDNNGQTALH----YAAKNNRNETAEFLISHGANINEKDNNGQTAL 1202
Query: 160 DHLSNGPGSAKLRELLLWH-----SEEQRKRRALEACSETKAK 197
H + + ELL+ H +++ + AL +E K
Sbjct: 1203 -HYAAENNRNETVELLISHGANINEKDKDGKTALHYAAENNNK 1244
Score = 70.9 bits (172), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT LH +A N+ E + L+ N + ++ G+T LH AAKN E A++L++H
Sbjct: 538 GQTALHYAAKNNRKETAEVLISHGAN----INEKDNNGQTALHYAAKNNRKETAEVLISH 593
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K NNG T LH Y+ ++ T + L+ + A+ + KDN G+T L H +
Sbjct: 594 GANINEKDNNGQTALH----YAAKNNRKETAEVLISHGANINEKDNNGQTAL-HYAAKNN 648
Query: 168 SAKLRELLLWH 178
+ E L+ H
Sbjct: 649 RKEYIEFLISH 659
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ V +T LH +A + E + L+ N + ++ YG+T LH+AAK
Sbjct: 762 INEKD-VYGKTALHYAAWKDSKETAEVLISHGAN----INEKDEYGQTALHIAAKTYSKA 816
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A+ L++HGA I K NNG T +H++ + AT + L+ + A+ + KDN G+T L
Sbjct: 817 TAEFLISHGANINEKDNNGQTAIHIAA----ENNSKATAEFLISHGANINEKDNNGQTAL 872
Query: 160 DHLSNGPGSAKLRELLLWH 178
H++ S E L+ H
Sbjct: 873 -HIAAENNSKATAEFLISH 890
Score = 64.3 bits (155), Expect = 8e-08, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT LH +A N+ E + L+ N + ++ G+T LH AAKN E + L++H
Sbjct: 604 GQTALHYAAKNNRKETAEVLISHGAN----INEKDNNGQTALHYAAKNNRKEYIEFLISH 659
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K NNG T +H Y+ ++ T + L+ + A+ + K N G+T L H++
Sbjct: 660 GANINEKDNNGQTAIH----YAAKNNSKETAEFLISHGANINEKGNNGQTAL-HIAVKNN 714
Query: 168 SAKLRELLLWH 178
+ E L+ H
Sbjct: 715 YIETAEFLISH 725
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 14/155 (9%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+T LH +A + E V+ L+ N + +++YG+T LH AA E A++L++H
Sbjct: 736 GKTALHYAAWKDSKETVEFLISHGAN----INEKDVYGKTALHYAAWKDSKETAEVLISH 791
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K G T LH++ ++ AT + L+ + A+ + KDN G+T + H++
Sbjct: 792 GANINEKDEYGQTALHIAA----KTYSKATAEFLISHGANINEKDNNGQTAI-HIAAENN 846
Query: 168 SAKLRELLLWH-----SEEQRKRRALEACSETKAK 197
S E L+ H ++ + AL +E +K
Sbjct: 847 SKATAEFLISHGANINEKDNNGQTALHIAAENNSK 881
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+T LH +A + K + ++ +D + ++ G+T LH AA+N E A++L++H
Sbjct: 473 GKTALHCAA-----DCRKIITKFHISDGANINEKDNNGQTALHYAAENNRKETAEVLISH 527
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K NNG T LH Y+ ++ T + L+ + A+ + KDN G+T L H +
Sbjct: 528 GANINEKDNNGQTALH----YAAKNNRKETAEVLISHGANINEKDNNGQTAL-HYAAKNN 582
Query: 168 SAKLRELLLWH 178
+ E+L+ H
Sbjct: 583 RKETAEVLISH 593
Score = 62.0 bits (149), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
SL E+ + + ++ G+T LH AAKN A+ L++HGA I K N+G T LH
Sbjct: 290 SLCEYFLSHGANINEKDNNGQTALHYAAKNNRKGMAEFLISHGANINEKDNDGKTALH-- 347
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
Y+ + + TVK L+ ++A+ + KDN+GKT L
Sbjct: 348 --YAAENNNKKTVKFLISHDANINEKDNDGKTAL 379
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 14/141 (9%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ V +T LH +A + E + L+ N + ++ YG+T LH AA N E
Sbjct: 1026 INEKD-VYGKTALHYAAWKDSKETAEVLISHGAN----INEKDEYGQTALHNAANNYSTE 1080
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT--VKTLLEYNADCSAKDNEGKT 157
A++L++HGA I K G T LH + + +Y+T + L+ + A+ + KDN G+T
Sbjct: 1081 IAEVLISHGANINEKDEYGQTALHNA------ANNYSTEIAEFLISHGANINEKDNNGQT 1134
Query: 158 PLDHLSNGPGSAKLRELLLWH 178
L H + + E L+ H
Sbjct: 1135 AL-HYAAKNNRNETAEFLISH 1154
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT +H++A N + L+ N + ++ G+T LH+AA+N A+ L++H
Sbjct: 835 GQTAIHIAAENNSKATAEFLISHGAN----INEKDNNGQTALHIAAENNSKATAEFLISH 890
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K NNG T +H++ + T + L+ + A+ + KD G+T + H++
Sbjct: 891 GANINEKDNNGQTAIHIAA----ENNRKETAEFLISHGANINEKDILGETAI-HIAAENN 945
Query: 168 SAKLRELLLWH 178
S + E L+ H
Sbjct: 946 SKETAEFLISH 956
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 13/133 (9%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+T LH +A + E V+ L+ N + +++YG+T LH AA E A++L++H
Sbjct: 1000 GKTALHYAAWKDSKETVEFLISHGAN----INEKDVYGKTALHYAAWKDSKETAEVLISH 1055
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYAT--VKTLLEYNADCSAKDNEGKTPLDHLSNG 165
GA I K G T LH + + +Y+T + L+ + A+ + KD G+T L + +N
Sbjct: 1056 GANINEKDEYGQTALHNA------ANNYSTEIAEVLISHGANINEKDEYGQTALHNAANN 1109
Query: 166 PGSAKLRELLLWH 178
S ++ E L+ H
Sbjct: 1110 Y-STEIAEFLISH 1121
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT LH++ N E + L+ N + ++ G+T LH AA E + L++H
Sbjct: 703 GQTALHIAVKNNYIETAEFLISHGAN----INEKDNNGKTALHYAAWKDSKETVEFLISH 758
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
GA I K G T LH + W + T + L+ + A+ + KD G+T L H++
Sbjct: 759 GANINEKDVYGKTALHYAAW----KDSKETAEVLISHGANINEKDEYGQTAL-HIAAKTY 813
Query: 168 SAKLRELLLWH 178
S E L+ H
Sbjct: 814 SKATAEFLISH 824
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 33/159 (20%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
QT LH +A N+ + + L+ N + ++ G+T LH AA+N + K L++H
Sbjct: 309 GQTALHYAAKNNRKGMAEFLISHGAN----INEKDNDGKTALHYAAENNNKKTVKFLISH 364
Query: 108 GAFIEAKANNGMTPLH----------------------------LSVWYSIRSEDYATVK 139
A I K N+G T LH ++ Y++R+ +
Sbjct: 365 DANINEKDNDGKTALHCAAECRKIITKFHISDGANNNEKDNNGKTALHYAVRAYTIVITR 424
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ + A+ + KDN G+T L H + + E L+ H
Sbjct: 425 FPISHGANINEKDNNGQTAL-HYAAKNNRKGMAEFLISH 462
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N + + K A +H A++ + + L+ + ++ + N +T LH +A E
Sbjct: 334 NINEKDNDGKTA-LHYAAENNNKKTVKFLISHDANINEKDND--GKTALHCAA-----EC 385
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
K + ++ +D ++ G+T LH A + + ++HGA I K NNG T LH
Sbjct: 386 RKIITKFHISDGANNNEKDNNGKTALHYAVRAYTIVITRFPISHGANINEKDNNGQTALH 445
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
Y+ ++ + L+ + A+ + KDN+GKT L
Sbjct: 446 ----YAAKNNRKGMAEFLISHGANINEKDNDGKTAL 477
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 29/140 (20%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH--- 123
+ +P + + ++ G+T LH AAKN A+ L++HGA I K N+G T LH
Sbjct: 422 ITRFPISHGANINEKDNNGQTALHYAAKNNRKGMAEFLISHGANINEKDNDGKTALHCAA 481
Query: 124 -------------------------LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTP 158
++ Y+ + T + L+ + A+ + KDN G+T
Sbjct: 482 DCRKIITKFHISDGANINEKDNNGQTALHYAAENNRKETAEVLISHGANINEKDNNGQTA 541
Query: 159 LDHLSNGPGSAKLRELLLWH 178
L H + + E+L+ H
Sbjct: 542 L-HYAAKNNRKETAEVLISH 560
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 104 LLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
L+HGA I K NNG T LH Y+ ++ + L+ + A+ + KDN+GKT L H +
Sbjct: 295 FLSHGANINEKDNNGQTALH----YAAKNNRKGMAEFLISHGANINEKDNDGKTAL-HYA 349
Query: 164 NGPGSAKLRELLLWH 178
+ K + L+ H
Sbjct: 350 AENNNKKTVKFLISH 364
>gi|207099807|emb|CAQ52956.1| CD4-specific ankyrin repeat protein D29.2 [synthetic construct]
Length = 169
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 81/145 (55%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N ++ +TPLH++A EIV+ LL+ ++ AQ+ YG TPLH
Sbjct: 31 RILMANGADVNAKDD-EGRTPLHLAAREGHLEIVEVLLKHGA----DVNAQDWYGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL + A + A ++G TPLHL+ Y+ V+ LL+ AD +A
Sbjct: 86 LAAAWGHLEIVEVLLKNVADVNAMDDDGSTPLHLAAHYA----HLEVVEVLLKSGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
D GKT D +S G+ L E+L
Sbjct: 142 XDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + AK + G TPLHL+ R V+ LL++ AD +A+
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDDEGRTPLHLAA----REGHLEIVEVLLKHGADVNAQ 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G TPL HL+ G ++ E+LL
Sbjct: 77 DWYGSTPL-HLAAAWGHLEIVEVLL 100
>gi|318061308|ref|ZP_07980029.1| ATPase [Streptomyces sp. SA3_actG]
Length = 630
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILG 264
+VGL +K Q+R + + + R GL V +PP H F G GTGKT VARILG
Sbjct: 347 QMVGLEPVKRQVRALSAQLNMARLRAEQGLPV---QPPKRHFIFSGPSGTGKTTVARILG 403
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
R+ Y +G+L D + E QR+DLVGE++G T K + L +
Sbjct: 404 RVFYALGLLGGDHLVEAQRSDLVGEYLGQTAVKANELIDSALGGV 448
>gi|323450000|gb|EGB05884.1| hypothetical protein AURANDRAFT_13701 [Aureococcus anophagefferens]
Length = 223
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 9/109 (8%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKAL------GLKVGARR--PPHMAFLG 250
D LE L ++VGL LK ++R + ++++++R+ + G K A R PHM F G
Sbjct: 2 DPLERALDSLVGLEPLKEEIRALRRTLVVEQQRRNVLNLGGDGKKRKAARVSAPHMVFRG 61
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+PGTGKT AR++ +LL +G + D + EVQR DLV +VG T KTR
Sbjct: 62 SPGTGKTHAARLISQLLKELGYVHGD-IVEVQRADLVAGYVGQTALKTR 109
>gi|269101133|ref|YP_003289281.1| Chloroplast conserved protein CbbX [Ectocarpus siliculosus]
gi|266631641|emb|CAV31312.1| Chloroplast conserved protein CbbX [Ectocarpus siliculosus]
gi|270118771|emb|CAT18866.1| Chloroplast conserved protein CbbX [Ectocarpus siliculosus]
Length = 303
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 192 SETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLG 250
+E K +D L EL VGL +K ++++ + +++D+ R++LG G P HM+F G
Sbjct: 27 TEIKKIIDILNEEL---VGLLPVKTRIQEISALLVIDKLRESLGFTTG--NPGLHMSFTG 81
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+PGTGKT VA + +L+ +G + V R DLVG+++GHT PKT+
Sbjct: 82 SPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTK 130
>gi|291455558|ref|ZP_06594948.1| sporulation protein K-like protein [Streptomyces albus J1074]
gi|421744552|ref|ZP_16182527.1| AAA+ family ATPase [Streptomyces sp. SM8]
gi|291358507|gb|EFE85409.1| sporulation protein K-like protein [Streptomyces albus J1074]
gi|406687046|gb|EKC91092.1| AAA+ family ATPase [Streptomyces sp. SM8]
Length = 809
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D + +L +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 544 DTVLADLDALVGLASVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTT 602
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 603 VARLYGEILAALGVLDRGHLVEVSRVDLVGEHIGSTAIRTQ 643
>gi|332022332|gb|EGI62644.1| Ankyrin-2 [Acromyrmex echinatior]
Length = 7686
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/169 (33%), Positives = 76/169 (44%), Gaps = 11/169 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G LL N SL TPLH++A Y + + LL+
Sbjct: 497 LHIAAKEGQEEVASVLLENNASLTATTKK--GFTPLHLAAKYGNMNVARLLLQ----KNA 550
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++AQ G TPLH+A+ A LLL GA A A NG TPLH++ R
Sbjct: 551 PVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLHIAA----RKNQMD 606
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
TLLEY A +A+ G TPL HLS G + LL+ H + +
Sbjct: 607 IATTLLEYGAKANAESKAGFTPL-HLSAQEGHTDMSTLLIEHKADTNHK 654
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
TPLH++A N+ +I +LLE+ E +A G TPLH++A+ G + + LL+ H
Sbjct: 592 GHTPLHIAARKNQMDIATTLLEYGAKANAESKA----GFTPLHLSAQEGHTDMSTLLIEH 647
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLSNGP 166
A KA NG+TPLHL ED V ++L N A AK G TPL H+++
Sbjct: 648 KADTNHKAKNGLTPLHLCA-----QEDKVNVASILVKNGAQIDAKTKAGYTPL-HVASHF 701
Query: 167 GSAKLRELLL 176
G A + LL
Sbjct: 702 GQAAMVRFLL 711
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/177 (35%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D R + PA +H A+ D A LL+ N+ NP + TPLH++A Y
Sbjct: 157 DTRGKVRLPA-LHIAAKKDDCKAAALLLQ------NDHNPDVTSKSGFTPLHIAAHYGND 209
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
I SLL G D V A+ + TP+H+AAK G + LL++ GA IEAK +G+TP
Sbjct: 210 RIA-SLLYDKGAD-VNFAAK--HNITPMHVAAKWGKIKMVNLLMSKGANIEAKTRDGLTP 265
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS + V L+E A +K G PL S G R +LL+H
Sbjct: 266 LHCAA----RSGHHEVVDILIEKGAPIGSKTKNGLAPLHMASQGDHVDAAR-ILLYH 317
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 40/174 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TP+HV+A + K ++V L+ N +EA+ G TPLH AA++G +E +L+ GA
Sbjct: 231 TPMHVAAKWGKIKMVNLLMSKGAN----IEAKTRDGLTPLHCAARSGHHEVVDILIEKGA 286
Query: 110 FIEAKANNGMTPLHLS-----------VWYSIRSEDYATV------------------KT 140
I +K NG+ PLH++ + Y D TV K
Sbjct: 287 PIGSKTKNGLAPLHMASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKL 346
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSET 194
LL+ NAD +A+ G TPL H++ K+ ELLL H + ++EA +E+
Sbjct: 347 LLDRNADPNARALNGFTPL-HIACKKNRIKVVELLLKH------KASIEATTES 393
Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
+ +N D +R+ T +H + + + LL+ S+ E TPLHV++
Sbjct: 348 LDRNADPNARALNGFTPLHIACKKNRIKVVELLLKHKASI--EATTESGLTPLHVASFMG 405
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
IV LL+ + + + GETPLH+AA+ + ++LL +GA ++A+A
Sbjct: 406 CMNIVIYLLQHEASPDIP----TVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQ 461
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
TPLH++ R + V LL++ A A + TPL H++ G ++ +LL
Sbjct: 462 TPLHVAS----RLGNVDIVMLLLQHGAGVDATTKDLYTPL-HIAAKEGQEEVASVLL 513
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+ A +K + L++ + +++A+ G TPLH+A+ G + LL GA
Sbjct: 660 TPLHLCAQEDKVNVASILVK----NGAQIDAKTKAGYTPLHVASHFGQAAMVRFLLRSGA 715
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+++ N G TPLH + + + LLE A +A N G+T LD
Sbjct: 716 AVDSSTNAGYTPLHQAA----QQGHTLVINLLLESKAKPNAVTNNGQTALD 762
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A GD + R+L + + ++E V T LHV+A + K LL+ + A
Sbjct: 302 ASQGDHVDAARILLYHRAPVDEVT-VDYLTALHVAAHCGHVRVAKLLLD----RNADPNA 356
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
+ + G TPLH+A K + +LLL H A IEA +G+TPLH++ + + V
Sbjct: 357 RALNGFTPLHIACKKNRIKVVELLLKHKASIEATTESGLTPLHVASFMGCMN----IVIY 412
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ A G+TPL HL+ + +LL
Sbjct: 413 LLQHEASPDIPTVRGETPL-HLAARANQTDIIRILL 447
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A EIV+ LL N ++A G T LH+A+ G E ++L+ GA +
Sbjct: 39 LHLAAKDGHLEIVRELL----NRGAIVDAATKKGNTALHIASLAGQEEVVQVLVQRGASV 94
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++ NG TPL+++ + + VK LL A+ + +G TPL
Sbjct: 95 NAQSQNGFTPLYMAA----QENHDSVVKYLLCKGANQTLATEDGFTPL 138
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V++ A N G LH+AAK+G E + LL GA ++A G T LH++ S+ ++
Sbjct: 26 VDINASNANGLNALHLAAKDGHLEIVRELLNRGAIVDAATKKGNTALHIA---SLAGQE- 81
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
V+ L++ A +A+ G TPL
Sbjct: 82 EVVQVLVQRGASVNAQSQNGFTPL 105
Score = 46.2 bits (108), Expect = 0.020, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + +L +N + ++ + TPLHV++ + +A +V+ LL
Sbjct: 662 LHLCAQE-DKVNVASILVKNGAQIDAKTKA-GYTPLHVASHFGQAAMVRFLLR----SGA 715
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+++ G TPLH AA+ G LLL A A NNG T L ++
Sbjct: 716 AVDSSTNAGYTPLHQAAQQGHTLVINLLLESKAKPNAVTNNGQTALDIA 764
Score = 41.2 bits (95), Expect = 0.61, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L + LL N + + T LH+++ + E+V+ L++
Sbjct: 39 LHLAAKDGHLEIVRELL--NRGAIVDAATKKGNTALHIASLAGQEEVVQVLVQ----RGA 92
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
+ AQ+ G TPL+MAA+ + K LL GA +G TPL +++
Sbjct: 93 SVNAQSQNGFTPLYMAAQENHDSVVKYLLCKGANQTLATEDGFTPLAVAM 142
>gi|295839987|ref|ZP_06826920.1| ATPase [Streptomyces sp. SPB74]
gi|295827739|gb|EFG65569.1| ATPase [Streptomyces sp. SPB74]
Length = 630
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILG 264
+VGL +K Q+R + + + R GL V +PP H F G GTGKT VARILG
Sbjct: 347 QMVGLEPVKRQVRALSAQLNMARLRAEQGLPV---QPPKRHFIFSGPSGTGKTTVARILG 403
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
R+ Y +G+L D + E QR+DLVGE++G T K + L +
Sbjct: 404 RVFYALGLLGGDHLVEAQRSDLVGEYLGQTAVKANELIDSALGGV 448
>gi|365864367|ref|ZP_09404054.1| putative ATPase [Streptomyces sp. W007]
gi|364006163|gb|EHM27216.1| putative ATPase [Streptomyces sp. W007]
Length = 655
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K Q++ + + + R GL V +PP H F G GTGKT VARILGR
Sbjct: 373 MVGLEPVKRQVKALSAQLNMARLRADQGLPV---QPPKRHFVFSGPSGTGKTTVARILGR 429
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 430 VFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 473
>gi|154310142|ref|XP_001554403.1| hypothetical protein BC1G_06991 [Botryotinia fuckeliana B05.10]
Length = 1222
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM-YGETPL 89
+LL E + + ++ QTPL + + +VK LLE G D +E+++ YG TPL
Sbjct: 943 KLLLEKGADIESKDSDYGQTPLSWATKDGRDAVVKLLLE-KGAD---IESKDSEYGRTPL 998
Query: 90 HMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCS 149
AAKNG + KLLL GA IE+K NG TPL L+ +I D A VK LLE +AD
Sbjct: 999 LWAAKNGHDTVVKLLLEKGADIESKDRNGQTPLLLA---AINGHD-AVVKLLLEKDADIE 1054
Query: 150 AKDNE-GKTPLDHLSNGPGSAKLRELLL 176
+KD+ G+TPL + G G + +LLL
Sbjct: 1055 SKDSRYGRTPLS-WAAGNGHDAVVKLLL 1081
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM-YGETPLHMAAKNGCNEAAKLLLAH 107
QTPL ++A +VK LLE ++E+++ YG TPL AAKNG + KLLL
Sbjct: 1095 QTPLLLAAINGHDAVVKLLLE----KDADIESKDSRYGRTPLLWAAKNGHDTVVKLLLEK 1150
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE-GKTPL 159
GA IE+K NG TPL L+ +I D A VK LLE +AD +KD+ G+TPL
Sbjct: 1151 GADIESKDRNGQTPLLLA---AINGHD-AVVKLLLEKDADIESKDSRYGRTPL 1199
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 10/113 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM-YGETPLHMAAKNGCNEAAKLLLAH 107
QTPL ++A +VK LLE ++E+++ YG TPL AA NG + KLLL
Sbjct: 1028 QTPLLLAAINGHDAVVKLLLE----KDADIESKDSRYGRTPLSWAAGNGHDAVVKLLLEK 1083
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE-GKTPL 159
GA IE+K NG TPL L+ +I D A VK LLE +AD +KD+ G+TPL
Sbjct: 1084 GADIESKDRNGQTPLLLA---AINGHD-AVVKLLLEKDADIESKDSRYGRTPL 1132
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL E + + ++ +TPL +AG +VK LLE G D +E+++ G+T
Sbjct: 1041 AVVKLLLEKDADIESKDSRYGRTPLSWAAGNGHDAVVKLLLE-KGAD---IESKDRNGQT 1096
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAK-ANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
PL +AA NG + KLLL A IE+K + G TPL +W + D VK LLE A
Sbjct: 1097 PLLLAAINGHDAVVKLLLEKDADIESKDSRYGRTPL---LWAAKNGHD-TVVKLLLEKGA 1152
Query: 147 DCSAKDNEGKTPL 159
D +KD G+TPL
Sbjct: 1153 DIESKDRNGQTPL 1165
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A +LL E + + ++ +TPL +A +VK LLE G D +E+++ G+T
Sbjct: 974 AVVKLLLEKGADIESKDSEYGRTPLLWAAKNGHDTVVKLLLE-KGAD---IESKDRNGQT 1029
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAK-ANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
PL +AA NG + KLLL A IE+K + G TPL W + D A VK LLE A
Sbjct: 1030 PLLLAAINGHDAVVKLLLEKDADIESKDSRYGRTPLS---WAAGNGHD-AVVKLLLEKGA 1085
Query: 147 DCSAKDNEGKTPL 159
D +KD G+TPL
Sbjct: 1086 DIESKDRNGQTPL 1098
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 69/114 (60%), Gaps = 11/114 (9%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNM-YGETPLHMAAKNGCNEAAKLLLAH 107
T + +++ + EIVK LLE G D +E+++ YG+TPL AA+NG + KLLL
Sbjct: 893 HTTIIIASYFGLNEIVKLLLE-RGAD---IESKDSKYGQTPLLWAAENGHDTVVKLLLEK 948
Query: 108 GAFIEAK-ANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNE-GKTPL 159
GA IE+K ++ G TPL W + D A VK LLE AD +KD+E G+TPL
Sbjct: 949 GADIESKDSDYGQTPLS---WATKDGRD-AVVKLLLEKGADIESKDSEYGRTPL 998
>gi|344998464|ref|YP_004801318.1| AAA ATPase central domain-containing protein [Streptomyces sp.
SirexAA-E]
gi|344314090|gb|AEN08778.1| AAA ATPase central domain protein [Streptomyces sp. SirexAA-E]
Length = 632
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K Q++ + + + R GL V +PP H F G GTGKT VARILGR
Sbjct: 350 MVGLEPVKRQVKALSAQLNMARLRAEQGLPV---QPPKRHFVFSGPSGTGKTTVARILGR 406
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ Y +G+L D + E QR+DLVGEF+G T K + L +
Sbjct: 407 VFYALGLLGGDHLVEAQRSDLVGEFLGQTAVKANELIDSALGGV 450
>gi|405970132|gb|EKC35064.1| Tankyrase-1 [Crassostrea gigas]
Length = 1162
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERN-PVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A++GD+ ++L+ +NP +N R+ TPLH +AGYN+ +V+ LL+ ++
Sbjct: 495 AKAGDMEVVKKLISQNPHSVNCRDLDGRHSTPLHFAAGYNRVVVVEYLLQH----GADVH 550
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A++ G PLH A G E +LL+ HGA + TPLH + + K
Sbjct: 551 AKDKGGLVPLHNACSYGHFEVTELLIKHGACVNVADLWKFTPLHEAAAKG----KFEICK 606
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNG 165
LL++ AD + K+ +G TPLD + G
Sbjct: 607 LLLKHGADPNKKNRDGNTPLDLVKEG 632
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 21 AQSGDLLAFQRLL-RENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
A+ G+L Q+L +EN + + + TPLH++AGYN E+ + LLE + ++
Sbjct: 650 AKKGNLARVQKLASQENINCRDTQG--RNSTPLHLAAGYNNVEVAEFLLE----NGADVN 703
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
AQ+ G PLH A+ G + A LL+ + A G TPLH + R++
Sbjct: 704 AQDKGGLIPLHNASSYGHVDIAALLIKFNTCVNAVDRWGFTPLHEAAQKG-RTQ---LCS 759
Query: 140 TLLEYNADCSAKDNEGKTPLD 160
LL + AD + K+ EG TPLD
Sbjct: 760 LLLAHGADPTMKNQEGHTPLD 780
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
+PLH +AG+ + ++V+ LLE + A++ G PLH A G E +LLL GA
Sbjct: 57 SPLHFAAGFGRKDVVEHLLEC----GASVHAKDDGGLIPLHNACSFGHAEVVQLLLRSGA 112
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
A+ N TPLH + +I+ + + LL++ AD + ++ +GKT LD
Sbjct: 113 DANARDNWNYTPLHEA---AIKGKIDVCI-VLLQHCADPNIRNTDGKTALD 159
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++AGYN+ IV+ LL+ ++ A++ G PLH A G E ++LL GA
Sbjct: 210 TPLHLAAGYNRTRIVQLLLQH----GADVHAKDKGGLVPLHNACSYGHFEVTEMLLKAGA 265
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A TPLH + S R E LL + AD + + K+ +D A
Sbjct: 266 SVNAMDLWQFTPLHEAASKS-RVE---VCSLLLAHGADPTLVNCHSKSAID-------VA 314
Query: 170 KLRELLLWHSEEQRKRRALEACSET 194
REL +E + LE C +
Sbjct: 315 PTRELQERLQQEFKGHSLLEGCRQA 339
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 51 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
PLH + + AE+V+ LL + A++ + TPLH AA G + +LL H A
Sbjct: 91 PLHNACSFGHAEVVQLLLR----SGADANARDNWNYTPLHEAAIKGKIDVCIVLLQHCAD 146
Query: 111 IEAKANNGMTPLHLS----------------VWYSIRSEDYATVKTLLE-YNADCSAKDN 153
+ +G T L L+ + + RS + + +LL N +C A D
Sbjct: 147 PNIRNTDGKTALDLADPSAKAVLTGEYKKDELLEAARSGNEDKLMSLLTPLNVNCHASDG 206
Query: 154 EGKTPLDHLSNGPGSAKLRELLLWHSEE 181
TPL HL+ G ++ +LLL H +
Sbjct: 207 RKSTPL-HLAAGYNRTRIVQLLLQHGAD 233
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
+PLH AA G + + LL GA + AK + G+ PLH + + V+ LL A
Sbjct: 57 SPLHFAAGFGRKDVVEHLLECGASVHAKDDGGLIPLHNACSFG----HAEVVQLLLRSGA 112
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
D +A+DN TPL H + G + +LL H + R
Sbjct: 113 DANARDNWNYTPL-HEAAIKGKIDVCIVLLQHCADPNIR 150
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V A + TPLH+AA +LLL HGA + AK G+ PLH + Y +
Sbjct: 199 VNCHASDGRKSTPLHLAAGYNRTRIVQLLLQHGADVHAKDKGGLVPLHNACSYG----HF 254
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
+ LL+ A +A D TPL H + ++ LLL H +
Sbjct: 255 EVTEMLLKAGASVNAMDLWQFTPL-HEAASKSRVEVCSLLLAHGAD 299
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 29 FQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYG--E 86
Q++L+E+P + L +A E+VK L+ + + +++ G
Sbjct: 472 IQKMLKEDPPV----GGTDVDIQLLEAAKAGDMEVVKKLIS---QNPHSVNCRDLDGRHS 524
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
TPLH AA + LL HGA + AK G+ PLH + Y + + L+++ A
Sbjct: 525 TPLHFAAGYNRVVVVEYLLQHGADVHAKDKGGLVPLHNACSYG----HFEVTELLIKHGA 580
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
+ D TPL H + G ++ +LLL H + K+
Sbjct: 581 CVNVADLWKFTPL-HEAAAKGKFEICKLLLKHGADPNKK 618
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGY---NKAEIVKSLLEWPGN 73
+ GC Q+ D+ ++ L ++N ++P T LH +A + ++V++L+ N
Sbjct: 333 LEGCRQA-DVARVKKYLE----VVNFKHPYSGDTALHCAAASPFPKRKQVVEALIRKGAN 387
Query: 74 DKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSE 133
L +N T LH+AA + +LL HGA + A G T LH +
Sbjct: 388 ----LNDKNKEYVTALHIAADKAHYDVMDVLLKHGAKVNALDGLGQTALHRVA----QQG 439
Query: 134 DYATVKTLLEYNADCSAKDNEGKT 157
+ + L+ Y D S +G T
Sbjct: 440 NMQACRLLMSYGVDSSIVSLQGYT 463
>gi|434381025|ref|YP_006702808.1| ATPase, AAA family [Brachyspira pilosicoli WesB]
gi|404429674|emb|CCG55720.1| ATPase, AAA family [Brachyspira pilosicoli WesB]
Length = 366
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E ++EL ++L+ +VGL +K + + R GL + H+AF GNP
Sbjct: 95 EDNRSLEELISDLNELVGLESVKNHINDLIAFHTVQALRNKYGLH-SQKTTMHLAFTGNP 153
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GTGKT VARI+GR+ +G+L EV RTDL+ + G T K ++ +
Sbjct: 154 GTGKTTVARIIGRIYKHIGLLSKCHFIEVSRTDLIAGYQGQTALKVKKVI 203
>gi|359147417|ref|ZP_09180724.1| ATPase AAA [Streptomyces sp. S4]
Length = 808
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D + +L +VGL +K ++R + + RR+ GLK + R H+ F G+PGTGKT
Sbjct: 543 DTVLADLDALVGLASVKREVRALTDMIEVGRRRQEAGLKAASVRR-HLVFTGSPGTGKTT 601
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
VAR+ G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 602 VARLYGEILAALGVLDRGHLVEVSRVDLVGEHIGSTAIRTQ 642
>gi|384569042|gb|AFI09266.1| LmrCD-specific DARPin, partial [synthetic construct]
Length = 169
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+SA EIV+ LL++ ++ A + +G TPLH+AA G E ++LL +GA
Sbjct: 49 TPLHLSANSGHLEIVEVLLKY----GADVNAGDTFGWTPLHLAANRGHLEIVEVLLKYGA 104
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A G TPLHL+ + V+ LL+Y AD +A+D GKT D +S G+
Sbjct: 105 DVNADDWLGDTPLHLAALFG----HLEIVEVLLKYGADVNAQDKFGKTAFD-ISIDNGNE 159
Query: 170 KLRELL 175
L E+L
Sbjct: 160 DLAEIL 165
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + G TPLH++A +G E ++LL +GA + A G TPLHL+
Sbjct: 39 DVNAADYAGMTPLHLSANSGHLEIVEVLLKYGADVNAGDTFGWTPLHLAA----NRGHLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL+Y AD +A D G TPL HL+ G ++ E+LL
Sbjct: 95 IVEVLLKYGADVNADDWLGDTPL-HLAALFGHLEIVEVLL 133
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ +L+A+GA + A GMTPLHLS S V+ LL+Y AD +A
Sbjct: 21 AARAGQDDEVHILMANGADVNAADYAGMTPLHLSA----NSGHLEIVEVLLKYGADVNAG 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D G TPL HL+ G ++ E+LL
Sbjct: 77 DTFGWTPL-HLAANRGHLEIVEVLL 100
>gi|324999043|ref|ZP_08120155.1| CbbX protein [Pseudonocardia sp. P1]
Length = 348
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGK 256
+D L+ EL VGL +K +LR+ A +++D R G RP HM F GNPGTGK
Sbjct: 76 LDALDREL---VGLAPVKQRLRELAALLVVDRVRARFG--TATDRPTLHMCFTGNPGTGK 130
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
T VA+ + LL+ +G L + R DLVG++VGHT PKT+ V L +
Sbjct: 131 TTVAQRMAGLLHGLGYLRRGHLVTATRDDLVGQYVGHTAPKTKEIVQKALGGV 183
>gi|239985852|ref|ZP_04706516.1| hypothetical protein SrosN1_00957 [Streptomyces roseosporus NRRL
11379]
gi|291442807|ref|ZP_06582197.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291345754|gb|EFE72658.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 809
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR GLK + R H+ F G+PGTGKT VAR+
Sbjct: 547 GELDALVGLDSVKREVRALTDMIEVGRRRAEAGLKAASVRR-HLVFTGSPGTGKTTVARL 605
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 606 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 642
>gi|374608671|ref|ZP_09681469.1| AAA ATPase central domain protein [Mycobacterium tusciae JS617]
gi|373553257|gb|EHP79852.1| AAA ATPase central domain protein [Mycobacterium tusciae JS617]
Length = 573
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E E EL +GL +K Q+ + + + R A G+KV A+ HM F G PGTGKT +
Sbjct: 285 EAEAELDRQIGLTRVKEQIEAYRAATQMAKIRAARGMKV-AQASKHMIFAGPPGTGKTTI 343
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEITCL 312
AR++ +L +G++ ++ E R D V E+ G + KT R + H + + +
Sbjct: 344 ARVVANILAGLGVIAEPKLVESSRKDFVAEYEGQSSVKTSRTIDHAIGGVLFI 396
>gi|262283484|ref|ZP_06061250.1| cbxX/cfqX family protein [Streptococcus sp. 2_1_36FAA]
gi|262260975|gb|EEY79675.1| cbxX/cfqX family protein [Streptococcus sp. 2_1_36FAA]
Length = 935
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 17/123 (13%)
Query: 179 SEEQRKRRALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKV 238
SE+++KR ALE EL++++GL ++K +++K + +++R A G K
Sbjct: 375 SEQEKKRDALE--------------ELNSLIGLEKVKHEIKKMINMVEFNKKRIANG-KA 419
Query: 239 GARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTD--RVTEVQRTDLVGEFVGHTGP 296
++ H AF+GNPGTGKT VAR+LG +L+ G+L R E +DL+ VG T
Sbjct: 420 PEKQTLHAAFMGNPGTGKTTVARLLGEVLFEAGVLSGKEFRFVEATESDLISSNVGGTAE 479
Query: 297 KTR 299
+T+
Sbjct: 480 QTQ 482
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
L+ +VG+ ++K Q+ ++ +++R G V H FLGNPGTGKT VARILG
Sbjct: 663 LNRLVGIAKVKEQVEQFVAMAEFNQKRAEQGGLV-EDTTLHSLFLGNPGTGKTTVARILG 721
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L+ G++ + EV R++LVG + G T KTR
Sbjct: 722 NILFQKGVIKQKKFIEVSRSNLVGGYQGQTALKTR 756
>gi|333028409|ref|ZP_08456473.1| putative ATPase [Streptomyces sp. Tu6071]
gi|332748261|gb|EGJ78702.1| putative ATPase [Streptomyces sp. Tu6071]
Length = 634
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILG 264
+VGL +K Q+R + + + R GL V +PP H F G GTGKT VARILG
Sbjct: 351 QMVGLEPVKRQVRALSAQLNMARLRAEQGLPV---QPPKRHFIFSGPSGTGKTTVARILG 407
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
R+ Y +G+L D + E QR+DLVGE++G T K + L +
Sbjct: 408 RVFYALGLLGGDHLVEAQRSDLVGEYLGQTAVKANELIDSALGGV 452
>gi|123503806|ref|XP_001328606.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121911551|gb|EAY16383.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 574
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
N + + K A +H +S L + LL ++ + N + T LH + YN E
Sbjct: 347 NINEKDYLGKTA-LHIAVKSNQLKIVEFLLSHGANIDEKNNDGL--TALHFAVLYNDKET 403
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
V+ LL N ++ ++ G+T LH+A E K LL+HGA I+ K N+G+T LH
Sbjct: 404 VEFLLSHGAN----IDEKDYLGKTALHIAEMFNNEEIVKFLLSHGANIDEKDNDGLTALH 459
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++V +S V+ LL + A+ + KD GKT L H++ K+ E LL H
Sbjct: 460 IAV----KSNQLKIVEFLLSHGANINEKDYLGKTAL-HIAVKSNQLKIVEFLLSH 509
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 85/162 (52%), Gaps = 11/162 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H S L + LL ++ + N + T LH++ N+ +IV+ LL N
Sbjct: 293 LHIAVDSNQLEIVEFLLSHGANIDEKDNDGL--TALHIAVKSNQLKIVEFLLSHGAN--- 347
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ ++ G+T LH+A K+ + + LL+HGA I+ K N+G+T LH +V Y+ D
Sbjct: 348 -INEKDYLGKTALHIAVKSNQLKIVEFLLSHGANIDEKNNDGLTALHFAVLYN----DKE 402
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
TV+ LL + A+ KD GKT L H++ + ++ + LL H
Sbjct: 403 TVEFLLSHGANIDEKDYLGKTAL-HIAEMFNNEEIVKFLLSH 443
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
++SL E+ + + ++ G T LH+A + E + LL+HGA I+ K N+G+T LH
Sbjct: 268 IQSLCEYFLSHGANINEKDNGGLTALHIAVDSNQLEIVEFLLSHGANIDEKDNDGLTALH 327
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++V +S V+ LL + A+ + KD GKT L H++ K+ E LL H
Sbjct: 328 IAV----KSNQLKIVEFLLSHGANINEKDYLGKTAL-HIAVKSNQLKIVEFLLSH 377
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++ N+ +IV+ LL N + ++ G+T LH+A K+ + + LL+HGA
Sbjct: 456 TALHIAVKSNQLKIVEFLLSHGAN----INEKDYLGKTALHIAVKSNQLKIVEFLLSHGA 511
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLL 142
I K G T LH++ I +E+ TV+ L+
Sbjct: 512 NINEKDYLGKTALHIAT--KINNEE--TVEVLI 540
>gi|333030238|ref|ZP_08458299.1| AAA ATPase central domain protein [Bacteroides coprosuis DSM 18011]
gi|332740835|gb|EGJ71317.1| AAA ATPase central domain protein [Bacteroides coprosuis DSM 18011]
Length = 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E + ++EL +L+ +VGL+ +K ++ + RK GL + H+AF+GNP
Sbjct: 91 EDHSTLEELTLQLNQLVGLNNVKSKVNDLIAFQKVQLLRKEKGLH-SPKSTMHLAFIGNP 149
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GTGKT VARI+GR+ +G+L EV RTDL+ + G T K +
Sbjct: 150 GTGKTTVARIVGRIYQKLGLLSKGHFMEVSRTDLIAGYQGQTAHKVK 196
>gi|123407432|ref|XP_001303008.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121884350|gb|EAX90078.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 310
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A YN E+V+ LL N + A++ ET LH AAK C E ++LL+HG
Sbjct: 86 ETALHFAAKYNYKEMVEVLLSHGAN----VNAKDSDKETALHFAAKYNCKELVEVLLSHG 141
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK + T LH + Y+ + V+ LL + A+ +AKD++ +T L H +
Sbjct: 142 ANVNAKDRDKETALHFAAKYNYKE----MVEVLLSHGANVNAKDSDKETAL-HFAAKYNC 196
Query: 169 AKLRELLLWH 178
+L E+LL H
Sbjct: 197 KELVEVLLSH 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A YN E+V+ LL N + A++ ET LH AAK E ++LL+HG
Sbjct: 20 ETALHFAAKYNYKEMVEVLLSHGAN----VNAKDSDKETALHFAAKYNYKEMVEVLLSHG 75
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + AK ++ T LH + Y+ + V+ LL + A+ +AKD++ +T L H +
Sbjct: 76 ANVNAKDSDKETALHFAAKYNYKE----MVEVLLSHGANVNAKDSDKETAL-HFAAKYNC 130
Query: 169 AKLRELLLWH 178
+L E+LL H
Sbjct: 131 KELVEVLLSH 140
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 63 IVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPL 122
+V+ LL N + A++ ET LH AAK E ++LL+HGA + AK ++ T L
Sbjct: 1 MVEVLLSHGAN----VNAKDSDKETALHFAAKYNYKEMVEVLLSHGANVNAKDSDKETAL 56
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
H + Y+ + V+ LL + A+ +AKD++ +T L H + ++ E+LL H
Sbjct: 57 HFAAKYNYKE----MVEVLLSHGANVNAKDSDKETAL-HFAAKYNYKEMVEVLLSH 107
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A YN E+V+ LL N + A++ ET LH AAK E ++LL+HG
Sbjct: 185 ETALHFAAKYNCKELVEVLLSHGAN----VNAKDRDKETALHFAAKYNYKEMVEVLLSHG 240
Query: 109 AFIEAKAN-NGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPG 167
A I K T LHL+ + + V+ LL + A+ + K+ G+T L H +
Sbjct: 241 ANINEKVEFFEYTALHLAANRNFKE----MVELLLSHGANINEKNKFGETAL-HTAARFN 295
Query: 168 SAKLRELLL 176
S + ELLL
Sbjct: 296 SKETVELLL 304
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE+ T LH++A N E+V+ LL N + +N +GET LH AA+ E
Sbjct: 243 INEKVEFFEYTALHLAANRNFKEMVELLLSHGAN----INEKNKFGETALHTAARFNSKE 298
Query: 100 AAKLLLAHGAFI 111
+LLL+ GA I
Sbjct: 299 TVELLLSRGAKI 310
>gi|326403235|ref|YP_004283316.1| rubisco expression protein CbbX [Acidiphilium multivorum AIU301]
gi|325050096|dbj|BAJ80434.1| rubisco expression protein CbbX [Acidiphilium multivorum AIU301]
Length = 306
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R+ G A P HM+F GNPGTGKT VA +
Sbjct: 36 DLVGLRPVKARIREIASLLLIERVRQKCGFATEA--PTLHMSFTGNPGTGKTTVALRMAN 93
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L +G + ++ V R DLVG+++GHT PKT+
Sbjct: 94 ILKALGFVRQGQLISVTRDDLVGQYIGHTAPKTK 127
>gi|307244189|ref|ZP_07526304.1| ATPase, AAA family [Peptostreptococcus stomatis DSM 17678]
gi|306492339|gb|EFM64377.1| ATPase, AAA family [Peptostreptococcus stomatis DSM 17678]
Length = 373
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E K + EL +EL ++GL ++K +++ + + R+ L + H+AF GNP
Sbjct: 94 EDKRTLQELLDELDALIGLEKVKNKVQDLIVYQKVQKLRREKNLH-STKNTLHLAFTGNP 152
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
GTGKT VARI+GR+ +G+L EV RTDL+ + G T K ++ +
Sbjct: 153 GTGKTTVARIVGRIYKRIGLLSKGHFVEVSRTDLIAGYQGQTALKVKKVI 202
>gi|124001107|ref|XP_001276974.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121918960|gb|EAY23726.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 245
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
++L N +L+N ++ QTPLH+S+ N E + LL K++L+ GE+PLH
Sbjct: 2 QILITNGALINAQD-FHKQTPLHISSISNCKEATEFLLSHGA--KIDLKMTG--GESPLH 56
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A+ + +LL++HGA+I+A N G TPLH SV + +VK L+ + A+ +A
Sbjct: 57 YASFQQSLDTMELLISHGAYIDAPDNKGDTPLHCSV----DRNNKESVKFLILHGANINA 112
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
++ EG+TPL HL+ ++ ELLL
Sbjct: 113 ENKEGRTPL-HLAALSDKKEMVELLL 137
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH S N E VK L+ N + A+N G TPLH+AA + E +LLL+
Sbjct: 85 DTPLHCSVDRNNKESVKFLILHGAN----INAENKEGRTPLHLAALSDKKEMVELLLSLS 140
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A I AK N G TPLHL+ S V+ LL AD +AKD +G+ L
Sbjct: 141 ADINAKNNKGGTPLHLAAM----SNKKEMVELLLSLGADINAKDKKGRNAL 187
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH++A +K E+V+ LL ++ A+N G TPLH+AA + E +LLL+ G
Sbjct: 118 RTPLHLAALSDKKEMVELLLSLSA----DINAKNNKGGTPLHLAAMSNKKEMVELLLSLG 173
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
A I AK G LH ++ + VK + D ++KDN GK+ LD
Sbjct: 174 ADINAKDKKGRNALH----FAAMKNNLEIVKFFISNGLDINSKDNNGKSTLD 221
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
Query: 78 LEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYAT 137
+ AQ+ + +TPLH+++ + C EA + LL+HGA I+ K G +PLH Y+ + T
Sbjct: 11 INAQDFHKQTPLHISSISNCKEATEFLLSHGAKIDLKMTGGESPLH----YASFQQSLDT 66
Query: 138 VKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
++ L+ + A A DN+G TPL H S + + + L+ H
Sbjct: 67 MELLISHGAYIDAPDNKGDTPL-HCSVDRNNKESVKFLILH 106
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A NK E+V+ LL ++ A++ G LH AA E K +++G
Sbjct: 152 TPLHLAAMSNKKEMVELLLSLGA----DINAKDKKGRNALHFAAMKNNLEIVKFFISNGL 207
Query: 110 FIEAKANNGMTPLHLSV-WYSIRSEDY 135
I +K NNG + L L+ ++ R+E +
Sbjct: 208 DINSKDNNGKSTLDLAKRKWAYRTESF 234
>gi|123451058|ref|XP_001313777.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121895672|gb|EAY00848.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 557
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
T LH++A YN E K LL N ++ ++N TPLH A N E A+ LL+ G
Sbjct: 377 DTALHIAAKYNFIEFAKFLL----NHGADINSKNERLNTPLHTATLNNNREFAEFLLSQG 432
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G TPLH S W+ R++ + LL +N D +A+DN G+TPL H ++ S
Sbjct: 433 ADINLKNLSGETPLHTSSWWR-RNK---VMDVLLRFNVDVNARDNHGRTPL-HCASFNNS 487
Query: 169 AKLRELLLWHSEE 181
+ L+L H +
Sbjct: 488 LENVILMLKHGAD 500
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A + + F + L + + +N +N + TPLH + N E + LL ++
Sbjct: 383 AAKYNFIEFAKFLLNHGADINSKNERL-NTPLHTATLNNNREFAEFLLS----QGADINL 437
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
+N+ GETPLH ++ N+ +LL + A+ N+G TPLH + + + V
Sbjct: 438 KNLSGETPLHTSSWWRRNKVMDVLLRFNVDVNARDNHGRTPLHCASF----NNSLENVIL 493
Query: 141 LLEYNADCSAKDNEGKTPLD 160
+L++ AD + KD+ G T D
Sbjct: 494 MLKHGADPNLKDDVGNTAYD 513
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 29 FQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETP 88
F L + +N +N + +TPLH S+ + + +++ LL + V++ A++ +G TP
Sbjct: 424 FAEFLLSQGADINLKN-LSGETPLHTSSWWRRNKVMDVLLRF----NVDVNARDNHGRTP 478
Query: 89 LHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVW 127
LH A+ N E L+L HGA K + G T ++V+
Sbjct: 479 LHCASFNNSLENVILMLKHGADPNLKDDVGNTAYDIAVY 517
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
H++ N EI+ L+ + + + E N T +H+AA+ E + L + G I
Sbjct: 314 FHLAVKENLPEILGPLITFGIDPYYKGEHDN----TAIHLAAELNSIEIREALFSLGVDI 369
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
K NG T LH++ Y+ K LL + AD ++K+ TPL H + + +
Sbjct: 370 NTKKRNGDTALHIAAKYNFIE----FAKFLLNHGADINSKNERLNTPL-HTATLNNNREF 424
Query: 172 RELLL 176
E LL
Sbjct: 425 AEFLL 429
>gi|408826107|ref|ZP_11210997.1| ATPase AAA [Streptomyces somaliensis DSM 40738]
Length = 687
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 208 IVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP--HMAFLGNPGTGKTMVARILGR 265
+VGL +K Q++ + + + R GL V +PP H F G GTGKT VARILGR
Sbjct: 403 MVGLEPVKRQVKALSAQLEMARLRAGQGLPV---QPPKRHFVFSGPSGTGKTTVARILGR 459
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
+ Y +G+L D + E QR DLVGEF+G T K + L +
Sbjct: 460 VFYALGLLGGDHLVEAQRADLVGEFLGQTAVKANELIDSALGGV 503
>gi|408356785|ref|YP_006845316.1| stage V sporulation protein K [Amphibacillus xylanus NBRC 15112]
gi|407727556|dbj|BAM47554.1| stage V sporulation protein K [Amphibacillus xylanus NBRC 15112]
Length = 247
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
Query: 227 LDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDL 286
+++RR+A+ LKV R+ +M F GNPGTGKT VAR+L + +GIL +++ E R+DL
Sbjct: 10 MNKRREAVNLKV-ERQSLNMLFKGNPGTGKTTVARLLAKWFAELGILEKEKIIEADRSDL 68
Query: 287 VGEFVGHTGPKTR 299
VGE++G T KT+
Sbjct: 69 VGEYIGQTAHKTK 81
>gi|325680254|ref|ZP_08159816.1| putative stage V sporulation protein K [Ruminococcus albus 8]
gi|324108071|gb|EGC02325.1| putative stage V sporulation protein K [Ruminococcus albus 8]
Length = 1088
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 57/108 (52%)
Query: 199 DELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTM 258
D+ EL + GL +K Q+R +++R L K HM F GN GTGKT
Sbjct: 812 DDYVRELEELTGLGSVKAQVRALVASAKVNQRLAQLNRKTQGFGTLHMVFKGNAGTGKTT 871
Query: 259 VARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
VARI+G + + +G L ++ E R++LV +VG T +TR +V L
Sbjct: 872 VARIIGNIYHSLGALSKGQLVECNRSNLVAGYVGQTAARTREKVEEAL 919
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%)
Query: 193 ETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNP 252
E+ ++EL ++L + GL +K ++ + +++ R G+ + HM F GN
Sbjct: 527 ESAETVEELLDKLKAMTGLASVKESVQTVVNQVKVNKMRAEQGIAAASNGTLHMVFTGNA 586
Query: 253 GTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GTGKT VARI+G++ +G+LP E R DL+ G T + +V + I
Sbjct: 587 GTGKTTVARIIGKIYRRLGVLPKGHFVECTRKDLISSIYGKTAQQVSEKVKEAMGGI 643
>gi|148259837|ref|YP_001233964.1| ATPase central domain-containing protein [Acidiphilium cryptum
JF-5]
gi|338983533|ref|ZP_08632718.1| ATPase central domain-containing protein [Acidiphilium sp. PM]
gi|146401518|gb|ABQ30045.1| AAA ATPase, central domain protein [Acidiphilium cryptum JF-5]
gi|338207524|gb|EGO95476.1| ATPase central domain-containing protein [Acidiphilium sp. PM]
Length = 306
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 207 NIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMVARILGR 265
++VGL +K ++R+ A +L++ R+ G A P HM+F GNPGTGKT VA +
Sbjct: 36 DLVGLRPVKARIREIASLLLIERVRQKCGFATEA--PTLHMSFTGNPGTGKTTVALRMAN 93
Query: 266 LLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+L +G + ++ V R DLVG+++GHT PKT+
Sbjct: 94 ILKALGFVRQGQLISVTRDDLVGQYIGHTAPKTK 127
>gi|229916120|ref|YP_002884766.1| ATPase AAA [Exiguobacterium sp. AT1b]
gi|229467549|gb|ACQ69321.1| AAA ATPase central domain protein [Exiguobacterium sp. AT1b]
Length = 752
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 194 TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPG 253
T+A+ +E+ L +++GL ++K +++ W + +L + R+ G + H+ F GNPG
Sbjct: 219 TEARSSAIES-LEDMIGLDDIKARVKAWYRFLLFQKEREKAGFSSKHQPSLHLVFTGNPG 277
Query: 254 TGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
TGKT +AR++ + + +G+L + E R+ LVG +VG T + +V
Sbjct: 278 TGKTTLARLMAEIYFELGLLGRPDLVEADRSSLVGAYVGQTEEQVMNKV 326
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 194 TKAKMDELENE-----LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAF 248
T+ D+ ++E L ++VG+ + K QL + + + ++RKALGLK A H+
Sbjct: 484 TEEDFDQPDDESSPTSLDDLVGMEDAKAQLAEIEALIKIQKKRKALGLKT-APVQLHVTL 542
Query: 249 LGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
GN GTGKT A + ++L G L V V R DLV +VG T KT+
Sbjct: 543 TGNSGTGKTTFAYLYAQMLKRTGYLKRGHVNVVSRADLVSGYVGQTAQKTK 593
>gi|428215505|ref|YP_007088649.1| ATPase family protein associated with various cellular activities
(AAA),ATPase family protein associated with various
cellular activities (AAA) [Oscillatoria acuminata PCC
6304]
gi|428003886|gb|AFY84729.1| ATPase family protein associated with various cellular activities
(AAA),ATPase family protein associated with various
cellular activities (AAA) [Oscillatoria acuminata PCC
6304]
Length = 890
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 195 KAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGT 254
+A ++ L EL ++GL +K + + +R + G + R H+ FLGNPGT
Sbjct: 612 QASLEGLLQELDAMIGLSSVKAAMHELVASEQAKQRLRQAGYETDDRITRHLVFLGNPGT 671
Query: 255 GKTMVARILGRLLYMVGILPTDRVTEVQ--RTDLVGEFVGHTGPKTRRRVGHLLSEI 309
GKT VA ++G + +GIL ++ +V R LV E+VG T PKTR +V L I
Sbjct: 672 GKTTVAELVGAIFKALGILKKGQLIKVDKPRDSLVAEYVGQTAPKTRGKVEEALDGI 728
>gi|408534119|emb|CCK32293.1| hypothetical protein BN159_7914 [Streptomyces davawensis JCM 4913]
Length = 813
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 552 GELDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 610
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 611 YGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 647
>gi|358382064|gb|EHK19737.1| hypothetical protein TRIVIDRAFT_132539, partial [Trichoderma virens
Gv29-8]
Length = 1069
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T LH++A + ++ K LLE + +EA + Y TPLH AA N +LL+ GA
Sbjct: 832 TGLHLAAYFGISDAAKLLLE----RTINIEATDSYDRTPLHYAASNRQEAVVQLLIKQGA 887
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDY-ATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
I+A +G TPLH ++I S Y A ++ L+E AD AKD +G+TPL H ++
Sbjct: 888 DIKAIDKDGQTPLH----HAIASHGYKAIIQLLIERGADIEAKDKDGQTPLHHAASHGHE 943
Query: 169 AKLRELL 175
A ++ L+
Sbjct: 944 AIIQLLI 950
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 7/127 (5%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
QTPLH + + + + LL G D +EA++ G+TPLH AA +G +LL+ G
Sbjct: 897 QTPLHHAIASHGYKAIIQLLIERGAD---IEAKDKDGQTPLHHAASHGHEAIIQLLIERG 953
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A IEAK +G TPLH ++ A ++ L+E AD A DN G+TPL +
Sbjct: 954 ADIEAKDKDGQTPLH----HAPSHGHEAIIQLLIERGADIEAIDNSGRTPLLQATWDGQE 1009
Query: 169 AKLRELL 175
A +R+L+
Sbjct: 1010 AVIRKLI 1016
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A G Q L+ + E QTPLH + + I++ L+E
Sbjct: 934 LHHAASHGHEAIIQLLIERGADI--EAKDKDGQTPLHHAPSHGHEAIIQLLIE----RGA 987
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++EA + G TPL A +G + L+ A IEA ++G TPLHL+ + +
Sbjct: 988 DIEAIDNSGRTPLLQATWDGQEAVIRKLIEQAANIEATDSDGRTPLHLAAFLG----ETG 1043
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
++ L E +A+ A DN G+TPL
Sbjct: 1044 IIRQLTEQDANIEAMDNNGQTPL 1066
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
T LH+AA G ++AAKLLL IEA + TPLH Y+ + A V+ L++ A
Sbjct: 832 TGLHLAAYFGISDAAKLLLERTINIEATDSYDRTPLH----YAASNRQEAVVQLLIKQGA 887
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
D A D +G+TPL H G + +LL+
Sbjct: 888 DIKAIDKDGQTPLHHAIASHGYKAIIQLLI 917
>gi|255262983|ref|ZP_05342325.1| ankyrin repeat protein [Thalassiobium sp. R2A62]
gi|255105318|gb|EET47992.1| ankyrin repeat protein [Thalassiobium sp. R2A62]
Length = 271
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 6 DRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAG-YNKAEI 63
D +R+A T +H A D +L E + +N R V TPLH + ++K+E
Sbjct: 95 DLNARNASGETPLHIAAWPNDNPEVLTILLEAGANVNSREEV-GDTPLHFAFSRHSKSET 153
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN-EAAKLLLAHGAFIEAKANNGMTPL 122
+K L + +N +G TPLH AA N ++ +LLL GA + A+++NG TPL
Sbjct: 154 LKEFLTVLLEAGATVHTRNDFGFTPLHSAAAGNINIDSVQLLLDAGAEVNARSDNGFTPL 213
Query: 123 HLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
H + +S E +KTLL+ AD SA +++G+TP D
Sbjct: 214 HSAAQFSWNPE---IIKTLLQAGADGSAVNDDGETPFD 248
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAA-KNGCNEAAKLLL 105
+ TPLH++A N+ V ++L N + +L A+N GETPLH+AA N E +LL
Sbjct: 68 LGATPLHIAALENRNPRVFTILV---NAEADLNARNASGETPLHIAAWPNDNPEVLTILL 124
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSE---DYATVKTLLEYNADCSAKDNEGKTPLDHL 162
GA + ++ G TPLH + +SE ++ TV LLE A +++ G TPL
Sbjct: 125 EAGANVNSREEVGDTPLHFAFSRHSKSETLKEFLTV--LLEAGATVHTRNDFGFTPLHSA 182
Query: 163 SNGPGSAKLRELLL 176
+ G + +LLL
Sbjct: 183 AAGNINIDSVQLLL 196
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 73 NDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG-AFIEAKANNGMTPLHLSVWYSIR 131
+D ++ ++ G TPLH+AA N +L + A + A+ +G TPLH++ W +
Sbjct: 57 DDGADVSTRSELGATPLHIAALENRNPRVFTILVNAEADLNARNASGETPLHIAAWPNDN 116
Query: 132 SEDYATVKTLLEYNADCSAKDNEGKTPLDH-LSNGPGSAKLRELL 175
E + LLE A+ ++++ G TPL S S L+E L
Sbjct: 117 PE---VLTILLEAGANVNSREEVGDTPLHFAFSRHSKSETLKEFL 158
>gi|257064438|ref|YP_003144110.1| AAA+ family ATPase [Slackia heliotrinireducens DSM 20476]
gi|256792091|gb|ACV22761.1| AAA+ family ATPase [Slackia heliotrinireducens DSM 20476]
Length = 466
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 75/139 (53%), Gaps = 8/139 (5%)
Query: 171 LRELLLWHSEEQRKRRALEACSE-------TKAKMDELENELSNIVGLHELKIQLRKWAK 223
++E +WHS Q+ R EA E + K++EL L ++VGL +K Q+
Sbjct: 162 VKEYAVWHSGPQKFYRVAEAVVEDPESAEEKQEKLEELLANLDSLVGLDAVKRQVHDLVN 221
Query: 224 GMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQR 283
+ + + R+ LG+K HM F GNPGTGKT VAR+L + + +G+L ++ EV R
Sbjct: 222 LIQVQKMRQELGMKTDGV-SKHMVFSGNPGTGKTTVARMLAEIYHYLGVLRKGQLVEVDR 280
Query: 284 TDLVGEFVGHTGPKTRRRV 302
+ LV +VG T + + V
Sbjct: 281 SGLVRGYVGQTATRVQEVV 299
>gi|123407470|ref|XP_001303014.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121884357|gb|EAX90084.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 611
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D ++ AT CA + + +L N + +N ++ A TPLH +A N E +
Sbjct: 197 DINAKDKDEATPLHCAANNNSKETAEILISNGADINAKDKDEA-TPLHCAANNNSKETAE 255
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ ++ ++ A++ TPLH AA N E A++L+++GA I AK +G TPLH +
Sbjct: 256 ILI----SNGADISAKDKDEATPLHCAANNNSKETAEILISNGADINAKDEDGCTPLHYA 311
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
Y+ R E T + L+ AD +AKD + TPL H + S + E+L+
Sbjct: 312 ARYN-RKE---TAEILISNGADINAKDEDEATPL-HCAANNNSKETAEILI 357
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 95/185 (51%), Gaps = 9/185 (4%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D ++ AT CA + + +L N + +N ++ TPLH +A YN+ E +
Sbjct: 263 DISAKDKDEATPLHCAANNNSKETAEILISNGADINAKDEDGC-TPLHYAARYNRKETAE 321
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ ++ ++ A++ TPLH AA N E A++L+++GA I AK +G TPLH +
Sbjct: 322 ILI----SNGADINAKDEDEATPLHCAANNNSKETAEILISNGADINAKDEDGCTPLHYA 377
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKR 185
Y+ R E T + L+ AD +AKD + TPL ++ S + E+L+ + + +
Sbjct: 378 ARYN-RKE---TAEILISNGADLNAKDKDEATPLHWVAQHNNSKETAEILISNGADLNAK 433
Query: 186 RALEA 190
EA
Sbjct: 434 DKDEA 438
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 6 DRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIV 64
D ++ AT +H AQ + +L N + LN ++ A TPLH +A N E
Sbjct: 395 DLNAKDKDEATPLHWVAQHNNSKETAEILISNGADLNAKDKDEA-TPLHCAANNNSKETA 453
Query: 65 KSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
+ L+ ++ ++ A++ TPLH A N E A++L+++GA I AK +G TPLH
Sbjct: 454 EILI----SNGADINAKDKDEATPLHWVANNNSKETAEILISNGADINAKDEDGCTPLHY 509
Query: 125 SVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ Y+ R E T + L+ AD +AKD + TPL H + S + E+L+
Sbjct: 510 AARYN-RKE---TAEILISNGADLNAKDKDEATPL-HCAANNNSKETAEILI 556
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTP-LHVSAGYNKAEIVKSLLEWPGNDKVEL 78
C+Q +L +F L + N+ N +P H+S SLLE+ ++ ++
Sbjct: 120 CSQYNNLQSFLVYLDQ----TNDINACFVYSPNFHLS----------SLLEYFISNGADI 165
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
A++ TPLH AA N E A++L+++GA I AK + TPLH + + + T
Sbjct: 166 NAKDKDEATPLHCAANNNSKETAEILISNGADINAKDKDEATPLHCAANNNSKE----TA 221
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEA 190
+ L+ AD +AKD + TPL H + S + E+L+ + + + EA
Sbjct: 222 EILISNGADINAKDKDEATPL-HCAANNNSKETAEILISNGADISAKDKDEA 272
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 8/103 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YN+ E + L+ ++ +L A++ TPLH AA N E A++L+++GA
Sbjct: 505 TPLHYAARYNRKETAEILI----SNGADLNAKDKDEATPLHCAANNNSKETAEILISNGA 560
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
+ AK +G TPLH + Y+ R E T + L+ AD +AK+
Sbjct: 561 DLNAKDEDGCTPLHYAARYN-RKE---TAEILISNGADINAKN 599
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 9/154 (5%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D ++ AT CA + + +L N + +N ++ A TPLH A N E +
Sbjct: 429 DLNAKDKDEATPLHCAANNNSKETAEILISNGADINAKDKDEA-TPLHWVANNNSKETAE 487
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ ++ ++ A++ G TPLH AA+ E A++L+++GA + AK + TPLH +
Sbjct: 488 ILI----SNGADINAKDEDGCTPLHYAARYNRKETAEILISNGADLNAKDKDEATPLHCA 543
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ + T + L+ AD +AKD +G TPL
Sbjct: 544 ANNNSKE----TAEILISNGADLNAKDEDGCTPL 573
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + LN ++ A TPLH +A N E + L+ ++ +L A++ G TPLH
Sbjct: 520 EILISNGADLNAKDKDEA-TPLHCAANNNSKETAEILI----SNGADLNAKDEDGCTPLH 574
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
AA+ E A++L+++GA I AK M P L
Sbjct: 575 YAARYNRKETAEILISNGADINAKNKKWMDPSSL 608
>gi|440695732|ref|ZP_20878256.1| putative stage V sporulation protein K [Streptomyces turgidiscabies
Car8]
gi|440282110|gb|ELP69603.1| putative stage V sporulation protein K [Streptomyces turgidiscabies
Car8]
Length = 1103
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+ L ++VGL +K + + +R+A GL R H+ F G PGTGKT VAR+
Sbjct: 840 SRLGDMVGLAAVKRDVTDLVNLLSTARQREAAGLP-APRISHHLVFSGPPGTGKTTVARL 898
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G LL +G+LP ++ EV R DLVG +VGHT TR
Sbjct: 899 YGELLVSLGVLPRGQLVEVSRADLVGRYVGHTAQLTR 935
Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 7/97 (7%)
Query: 204 ELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTMVA 260
EL ++GL +K Q+R L +RR LG+ PP H+ F G PGTGKT VA
Sbjct: 560 ELEALIGLSNVKQQVRTLVNLTQLAQRRAQLGMSA----PPMSRHLVFAGPPGTGKTTVA 615
Query: 261 RILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPK 297
R+ G +L +G L + + EV R DLV + +G T K
Sbjct: 616 RLYGTILAQLGALRSGHLVEVSRADLVAQVIGGTAIK 652
>gi|189197439|ref|XP_001935057.1| stage V sporulation protein K [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981005|gb|EDU47631.1| stage V sporulation protein K [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1762
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
+L + ++VG EL Q R + + K+LG+ + P + F G PGTGKT
Sbjct: 1278 QLSSLFQDVVGCEELIEQFRGY---QITAANLKSLGMDPREQLPFNFLFKGPPGTGKTTT 1334
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRR 300
A +G++ Y +G L +V E TDL+G++VGHTGPK ++
Sbjct: 1335 AAKMGKIFYDMGFLSQAKVEECSATDLIGQYVGHTGPKVQK 1375
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 199 DELENELSNIVGLHELKIQLR--KWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+E + L +++GL +K Q K ++ + G + GA A LGNPGTGK
Sbjct: 728 NEALDSLVSMIGLEAVKQQFLAIKAKVDTIVRQNVSLTGERFGA------ALLGNPGTGK 781
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFV 291
T VAR + L VG LP D E + L + V
Sbjct: 782 TTVARYYAKFLVRVGALPGDHFFESSGSALANDGV 816
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+G+PGTGKT + ++ GR+L +G+L V D VG +G + T+
Sbjct: 1051 LIGSPGTGKTSIGKLYGRILADIGLLSNGEVVVKSPADFVGNVLGGSEKNTQ 1102
>gi|154413275|ref|XP_001579668.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121913877|gb|EAY18682.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 481
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A YN E + L+ N + +N YGET LH+AA+ E ++L++HG
Sbjct: 313 ETALHKAAYYNNEETAELLISHGIN----INEKNKYGETALHLAAEQNSKETTEILISHG 368
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
I K N G T LH + WY+ + T + L+ + + + KDN GKT L H + S
Sbjct: 369 VKINEKDNYGKTTLHYAAWYNSKE----TAELLISHGININEKDNYGKTAL-HYAAWYNS 423
Query: 169 AKLRELLLWH 178
+ ELL+ H
Sbjct: 424 KETAELLISH 433
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 25 DLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMY 84
D+ R L ++ N V ++SA +N + SL E+ ++ + A++ Y
Sbjct: 258 DVCVLYRNLESFLVYFDQTNDV--NKCFNISAKFN----IPSLCEYFLSNSANINAKDKY 311
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
ET LH AA E A+LL++HG I K G T LHL+ + + T + L+ +
Sbjct: 312 EETALHKAAYYNNEETAELLISHGININEKNKYGETALHLAAEQNSKE----TTEILISH 367
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ KDN GKT L H + S + ELL+ H
Sbjct: 368 GVKINEKDNYGKTTL-HYAAWYNSKETAELLISH 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 40 LNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNE 99
+NE++ +T LH +A YN E + L+ N + ++ YG+T LH AA E
Sbjct: 371 INEKDN-YGKTTLHYAAWYNSKETAELLISHGIN----INEKDNYGKTALHYAAWYNSKE 425
Query: 100 AAKLLLAHGAFIEAKANNGMTPLHLSVWYS 129
A+LL++HG I K +G T +H++ YS
Sbjct: 426 TAELLISHGININEKDYDGETAIHIAAKYS 455
>gi|329935763|ref|ZP_08285567.1| hypothetical protein SGM_1059 [Streptomyces griseoaurantiacus M045]
gi|329304754|gb|EGG48628.1| hypothetical protein SGM_1059 [Streptomyces griseoaurantiacus M045]
Length = 1113
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
+ L ++GL +K + + +R+A GL V R H+ F G PGTGKT VAR+
Sbjct: 840 SRLDALIGLSAVKRDVTDLVNLVSTARQREAAGLPV-PRISHHLVFTGPPGTGKTTVARL 898
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G LL +G+LP ++ EV R DLVG +VGHT TR
Sbjct: 899 YGELLVSLGVLPRGQLVEVSRADLVGRYVGHTAQLTR 935
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP---HMAFLGNPGTGKTMVAR 261
L +++GL +K Q+R L RR LG++ PP H+ F G PGTGKT VAR
Sbjct: 560 LESLIGLENVKEQVRTLVNLTQLARRRAQLGMQA----PPMSRHLIFAGPPGTGKTTVAR 615
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
+ G +L +G L + + EV R DLV + +G T KT
Sbjct: 616 LYGTILAELGALRSGHLVEVSRADLVAQVIGGTAIKT 652
>gi|123473584|ref|XP_001319979.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121902775|gb|EAY07756.1| hypothetical protein TVAG_000400 [Trichomonas vaginalis G3]
Length = 238
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+T LH +A Y++ E K L+ + + + A++ +G T H AA+ + L+ HG
Sbjct: 54 KTALHFAAEYDRLETAKLLISYGAD----INAKDKFGRTASHYAAEKELEGLIEYLVMHG 109
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
A I K NG TPLH + Y R E T K ++ Y AD +AKD E KTPLD+
Sbjct: 110 AKINEKDENGKTPLHFAAEYD-RLE---TAKLIISYGADINAKDKEAKTPLDY 158
>gi|433547096|ref|ZP_20503374.1| hypothetical protein D478_25493 [Brevibacillus agri BAB-2500]
gi|432181632|gb|ELK39255.1| hypothetical protein D478_25493 [Brevibacillus agri BAB-2500]
Length = 802
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLG 250
+E +K+ LE +L +++GL ++K ++R+ A+ + + R+ G + + P H+ +G
Sbjct: 241 AAERHSKLSALE-QLESLIGLRDIKQRVRQLAQFLQYRKLREEKGWHMHDQLPLHLVLMG 299
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
NPGTGKT +AR++ RL + +G+L ++ EV R+ LVG +VG T
Sbjct: 300 NPGTGKTTLARLIARLYHELGLLANGQLIEVDRSHLVGGYVGQT 343
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
E +L +++GL +K +L+K A + + + R A GL A H F GNPGTGKT VA+
Sbjct: 527 EAQLQSLIGLEAVKAELKKIAAYVAVQQERAARGLPKSAIEL-HAVFTGNPGTGKTTVAQ 585
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ ++L VG L + R DLV FVG T TRR+V
Sbjct: 586 LYAQMLQEVGYLKRGHLVTASRADLVAGFVGQTAALTRRKV 626
>gi|399048954|ref|ZP_10740231.1| AAA+ family ATPase [Brevibacillus sp. CF112]
gi|398053280|gb|EJL45479.1| AAA+ family ATPase [Brevibacillus sp. CF112]
Length = 802
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 191 CSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLG 250
+E +K+ LE +L +++GL ++K ++R+ A+ + + R+ G + + P H+ +G
Sbjct: 241 AAERHSKLSALE-QLESLIGLRDIKQRVRQLAQFLQYRKLREEKGWHMHDQLPLHLVLMG 299
Query: 251 NPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHT 294
NPGTGKT +AR++ RL + +G+L ++ EV R+ LVG +VG T
Sbjct: 300 NPGTGKTTLARLIARLYHELGLLANGQLIEVDRSHLVGGYVGQT 343
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 202 ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVAR 261
E +L +++GL +K +L+K A + + + R A GL A H F GNPGTGKT VA+
Sbjct: 527 EAQLQSLIGLEAVKAELKKIAAYVAVQQERAARGLPKSAIEL-HAVFTGNPGTGKTTVAQ 585
Query: 262 ILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ ++L VG L + R DLV FVG T TRR+V
Sbjct: 586 LYAQMLQEVGYLKRGHLVTASRADLVAGFVGQTAALTRRKV 626
>gi|386714446|ref|YP_006180769.1| stage V sporulation protein K [Halobacillus halophilus DSM 2266]
gi|384074002|emb|CCG45495.1| stage V sporulation protein K [Halobacillus halophilus DSM 2266]
Length = 752
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
+VGL ++K +R++ + + RK G + HM GNPGTGKT +AR+L
Sbjct: 215 FDQMVGLKDVKTYIRRYYHFLKYQQHRKNFGFSMVDEPGLHMIITGNPGTGKTTMARLLA 274
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+ + +GIL T V EV R+ LVG +VG + T V
Sbjct: 275 NIYHELGILDTKEVVEVNRSHLVGSYVGQSEENTMNYV 312
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
N L ++GL +K ++RK + + ++RK G V + H F GNPGTGKT VA I
Sbjct: 491 NRLDELIGLDNVKAEVRKLSSFVQAQQKRKENGYPVVPIQL-HSVFSGNPGTGKTTVAEI 549
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
+L G+L + V R+DLV +VG T KT+R++
Sbjct: 550 YSDILKQCGLLKRGHMVVVSRSDLVAGYVGQTAMKTKRKI 589
>gi|394986287|pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
gi|394986288|pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A Y EIV+ LL+ ++ A ++ G TPLH
Sbjct: 31 RILMANGADVNATDA-SGLTPLHLAATYGHLEIVEVLLKHGA----DVNAIDIMGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL HGA + A G TPLHL+ V+ LL++ AD +A
Sbjct: 86 LAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMG----HLEIVEVLLKHGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A +G+TPLHL+ Y V+ LL++ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYG----HLEIVEVLLKHGADVNAI 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL H +
Sbjct: 77 DIMGSTPL-HLAALIGHLEIVEVLLKHGAD 105
>gi|154418763|ref|XP_001582399.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121916634|gb|EAY21413.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 474
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
T LH +A YN E ++L+ + N ++ +N++G T LH AA C E A++L++HG
Sbjct: 346 NTSLHKAAEYNSKETTEALISFGAN----IDEKNIFGNTALHNAALKNCKETAEILISHG 401
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I K +G T LH Y+ RS + T + L+ + A+ + KD G T L H++ S
Sbjct: 402 ANINEKDEDGETALH----YTARSNNEETAEILISHGANINEKDKCGNTAL-HMAVLKNS 456
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 457 KETIEVLISH 466
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 87 TPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
T LH AA C E L++HGA I K +G T LH + Y+ + T + L+ + A
Sbjct: 314 TALHYAAGCNCKEVVDFLISHGANIHEKDEDGNTSLHKAAEYNSKE----TTEALISFGA 369
Query: 147 DCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+ K+ G T L H + + E+L+ H
Sbjct: 370 NIDEKNIFGNTAL-HNAALKNCKETAEILISH 400
>gi|456392732|gb|EMF58075.1| hypothetical protein SBD_0747 [Streptomyces bottropensis ATCC
25435]
Length = 813
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 552 GELDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 610
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 611 YGEILASLGVLDKGHLVEVSRVDLVGEHIGSTAIRTQ 647
>gi|298290443|ref|YP_003692382.1| CbbX protein [Starkeya novella DSM 506]
gi|296926954|gb|ADH87763.1| CbbX protein [Starkeya novella DSM 506]
Length = 314
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Query: 186 RALEACSETKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP- 244
RA A S +++L+ EL VGL +K +LR+ +L+D R L+ A P
Sbjct: 22 RAEFASSGLAEVLEQLDREL---VGLGPVKQRLREIGALLLVDRARARFDLQ--AVSPTL 76
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
HM+F GNPGTGKT VA + +L+ +G + + V R DLVG+++GHT PKT+
Sbjct: 77 HMSFTGNPGTGKTTVALRMAEILHRLGYVRKGHLVTVTRDDLVGQYIGHTAPKTK 131
>gi|123482355|ref|XP_001323761.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121906632|gb|EAY11538.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 570
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ + +T LH +A I++ L+ N + +++YGET LH
Sbjct: 335 ELLISHGANINEKD-IYGETALHNAAINTSKGIIELLISHGAN----INEKDVYGETALH 389
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+N C E ++ L++HGA I+ K N+G TPLH +V+Y+ + TV+ L+ + A+
Sbjct: 390 NAARNNCKENSEFLISHGANIDEKNNDGNTPLHQAVFYNSKE----TVELLISHGANIDE 445
Query: 151 KDNEGKTPL 159
K+ G+T L
Sbjct: 446 KNVHGQTAL 454
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + +NE++ V +T LH +A N E + L+ N ++ +N G TPLH
Sbjct: 368 ELLISHGANINEKD-VYGETALHNAARNNCKENSEFLISHGAN----IDEKNNDGNTPLH 422
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A E +LL++HGA I+ K +G T L + +Y+I+ + L+ Y A+ +
Sbjct: 423 QAVFYNSKETVELLISHGANIDEKNVHGQTALINATYYNIQE----IAQLLILYGANTNE 478
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLLWH 178
KDN G T L H + S + ELL+ H
Sbjct: 479 KDNYGNTAL-HNTAINNSKWIAELLISH 505
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LL + + ++E+N V QT L + YN EI + L+ + N ++ YG T LH
Sbjct: 434 ELLISHGANIDEKN-VHGQTALINATYYNIQEIAQLLILYGANTN----EKDNYGNTALH 488
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A N A+LL++HGA I K +G T LH + Y+ R E + L+ + A +
Sbjct: 489 NTAINNSKWIAELLISHGANISEKDKHGNTALHYAA-YNNRKE---IAEFLISHGAKINE 544
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
K+ GKT L H++ + ++ ELL
Sbjct: 545 KNEHGKTAL-HIAVKFNNKEIVELL 568
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
+ SL E+ + + ++ G+T LH AA N +LL++HGA I K G T LH
Sbjct: 297 IPSLCEYFLSHGASINEKDKNGQTALHKAATNTSKGIIELLISHGANINEKDIYGETALH 356
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
+ + + ++ L+ + A+ + KD G+T L
Sbjct: 357 NAAINTSK----GIIELLISHGANINEKDVYGETAL 388
>gi|28373835|pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
gi|28373836|pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G TPLH+AA+NG E KLLL GA + AK NG TPLHL+ R+ VK LLE
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA----RNGHLEVVKLLLEA 57
Query: 145 NADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
AD +AKD G+TPL HL+ G ++ +LLL
Sbjct: 58 GADVNAKDKNGRTPL-HLAARNGHLEVVKLLL 88
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH++A E+VK LLE ++ A++ G TPLH+AA+NG E KLLL G
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEA----GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 58
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNA 146
A + AK NG TPLHL+ R+ VK LLE A
Sbjct: 59 ADVNAKDKNGRTPLHLAA----RNGHLEVVKLLLEAGA 92
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A++G L +LL E + +N ++ +TPLH++A E+VK LLE
Sbjct: 6 LHLAARNGHL-EVVKLLLEAGADVNAKDK-NGRTPLHLAARNGHLEVVKLLLEA----GA 59
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAF 110
++ A++ G TPLH+AA+NG E KLLL GA+
Sbjct: 60 DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93
>gi|302562062|ref|ZP_07314404.1| sporulation protein K [Streptomyces griseoflavus Tu4000]
gi|302479680|gb|EFL42773.1| sporulation protein K [Streptomyces griseoflavus Tu4000]
Length = 795
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 534 GELDALVGLESVKREVRALTDMIEVGRRRQRAGLKAASVKR-HLVFTGSPGTGKTTVARL 592
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 593 YGEILASLGVLEQGHLVEVSRVDLVGEHIGSTAIRTQ 629
>gi|123507195|ref|XP_001329367.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121912321|gb|EAY17144.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 334
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 9/113 (7%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN-EAAKLLLAH 107
+TPLH + ++ L+E+ + ++ A++ G+TPLH A +N C+ + K L++H
Sbjct: 200 KTPLHDAMW----KVSIDLIEFLISHGADVNAKDDCGKTPLHDAIRNSCSIDIIKFLISH 255
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
GA I AK+N G TPLH +V + K L+ ++AD +AKDN GKTP D
Sbjct: 256 GANINAKSNKGKTPLHKAVSHY----QLGVAKFLISHDADANAKDNNGKTPFD 304
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 49 QTPLHVSAGYN-KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TP H + N +I+K L+ N + A++ G+TPLH A + + L++H
Sbjct: 133 KTPFHDAIRNNCSIDIIKFLISHGAN----INAKDDCGKTPLHDAMWKVSIDLIEFLISH 188
Query: 108 GAFIEAKANNGMTPLHLSVW-YSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGP 166
GA + AK + G TPLH ++W SI ++ L+ + AD +AKD+ GKTPL
Sbjct: 189 GADVNAKDDCGKTPLHDAMWKVSID-----LIEFLISHGADVNAKDDCGKTPLHDAIRNS 243
Query: 167 GSAKLRELLLWH 178
S + + L+ H
Sbjct: 244 CSIDIIKFLISH 255
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 11/148 (7%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
+ T LH +A Y+ EI+ + +++ +++ TPL A E K L++
Sbjct: 65 LGGTALHKAAEYHFTEILDVFIRH----GYDIDIKDINKRTPLDEAISQRDFETIKFLIS 120
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGP 166
HGA + AK + G TP H ++ + + +K L+ + A+ +AKD+ GKTPL H +
Sbjct: 121 HGADVNAKVHCGKTPFHDAIRNNCSID---IIKFLISHGANINAKDDCGKTPL-HDAMWK 176
Query: 167 GSAKLRELLLWHSEEQRKRRALEACSET 194
S L E L+ H + + + C +T
Sbjct: 177 VSIDLIEFLISHGADVNAK---DDCGKT 201
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 67 LLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSV 126
L WP V++++ + G T LH AA+ E + + HG I+ K N TPL
Sbjct: 52 LSRWP---DVKMKSGEL-GGTALHKAAEYHFTEILDVFIRHGYDIDIKDINKRTPLD--- 104
Query: 127 WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
+I D+ T+K L+ + AD +AK + GKTP S + + L+ H
Sbjct: 105 -EAISQRDFETIKFLISHGADVNAKVHCGKTPFHDAIRNNCSIDIIKFLISH 155
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 49 QTPLHVSA-GYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLH + +I+K L+ N + A++ G+TPLH A + AK L++H
Sbjct: 233 KTPLHDAIRNSCSIDIIKFLISHGAN----INAKSNKGKTPLHKAVSHYQLGVAKFLISH 288
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLE 143
A AK NNG TP S+ Y K+L +
Sbjct: 289 DADANAKDNNGKTPFDQKNGKSVYEYIYYVPKSLTQ 324
>gi|123453498|ref|XP_001314730.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121897368|gb|EAY02491.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 562
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A YN E + L+ + ++ A++ G TPLH
Sbjct: 250 EILISNGADINAKNE-DGCTPLHYAARYNSKETAEILIS----NGADINAKDKDGCTPLH 304
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA++ E A++ +++GA I AK +G+TPLH Y+ + T + L+ AD +A
Sbjct: 305 FAARDNSKETAEIFISNGADINAKTKDGLTPLH----YAANNNSKETAEILISNGADINA 360
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
K+ +G TPL H + S + E+L+
Sbjct: 361 KNEDGCTPL-HWAANNNSKETAEILI 385
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+N G TPLH AA N E A++L+++GA
Sbjct: 334 TPLHYAANNNSKETAEILIS----NGADINAKNEDGCTPLHWAANNNSKETAEILISNGA 389
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH + Y+ + T + L+ AD +AK+ +G TPL H + S
Sbjct: 390 DINAKDKDGCTPLHYAARYNSKE----TAEILISNGADINAKNEDGCTPL-HWAADYNSK 444
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 445 ETTEILI 451
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+N G TPLH AA N E A++L+++GA
Sbjct: 169 TPLHYAANNNSKETAEILIS----NGADINAKNEDGCTPLHWAANNNSKETAEILISNGA 224
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH + Y+ + T + L+ AD +AK+ +G TPL H + S
Sbjct: 225 DINAKDKDGCTPLHYAARYNSKE----TAEILISNGADINAKNEDGCTPL-HYAARYNSK 279
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 280 ETAEILI 286
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 9/131 (6%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
V TP H + YN E + L+ + ++ A++ G TPLH AA++ E A++ +
Sbjct: 99 VAGCTPFHYAVRYNSKETAEILIS----NGADINAKDKDGCTPLHFAARDNSKETAEIFI 154
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
++GA I AK +G+TPLH Y+ + T + L+ AD +AK+ +G TPL H +
Sbjct: 155 SNGADINAKTKDGLTPLH----YAANNNSKETAEILISNGADINAKNEDGCTPL-HWAAN 209
Query: 166 PGSAKLRELLL 176
S + E+L+
Sbjct: 210 NNSKETAEILI 220
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A YN E + L+ + ++ A++ G TPLH
Sbjct: 415 EILISNGADINAKNE-DGCTPLHWAADYNSKETTEILIS----NGADINAKDKDGCTPLH 469
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E A++ +++GA I AK NG+TPLH Y+ + T + + AD +A
Sbjct: 470 YAARYNSKETAEIFISNGADINAKTKNGLTPLHWGARYNSKE----TTEIFISNGADINA 525
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD G TPL H + S + E+L+
Sbjct: 526 KDVAGCTPL-HYAVRYNSKETAEILI 550
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A N E + L+ + ++ A++ G TPLH
Sbjct: 184 EILISNGADINAKNE-DGCTPLHWAANNNSKETAEILIS----NGADINAKDKDGCTPLH 238
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E A++L+++GA I AK +G TPLH + Y+ + T + L+ AD +A
Sbjct: 239 YAARYNSKETAEILISNGADINAKNEDGCTPLHYAARYNSKE----TAEILISNGADINA 294
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD +G TPL H + S + E+ +
Sbjct: 295 KDKDGCTPL-HFAARDNSKETAEIFI 319
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 10/146 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
+L N + +N +N TPLH +A N E + L+ + ++ A++ G TPLH
Sbjct: 349 EILISNGADINAKNE-DGCTPLHWAANNNSKETAEILIS----NGADINAKDKDGCTPLH 403
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
AA+ E A++L+++GA I AK +G TPLH + Y+ + T + L+ AD +A
Sbjct: 404 YAARYNSKETAEILISNGADINAKNEDGCTPLHWAADYNSKE----TTEILISNGADINA 459
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELLL 176
KD +G TPL H + S + E+ +
Sbjct: 460 KDKDGCTPL-HYAARYNSKETAEIFI 484
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH A YN E + L+ + +L A+++ G TP H A + E A++L+++GA
Sbjct: 70 TPLHWGARYNSKETTEILIS----NGADLYAKDVAGCTPFHYAVRYNSKETAEILISNGA 125
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH ++ R T + + AD +AK +G TPL + +N S
Sbjct: 126 DINAKDKDGCTPLH----FAARDNSKETAEIFISNGADINAKTKDGLTPLHYAANN-NSK 180
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 181 ETAEILI 187
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + + + ++ A+ G TPLH AA N E A++L+++GA
Sbjct: 136 TPLHFAARDNSKETAEIFIS----NGADINAKTKDGLTPLHYAANNNSKETAEILISNGA 191
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH ++ + T + L+ AD +AKD +G TPL H + S
Sbjct: 192 DINAKNEDGCTPLH----WAANNNSKETAEILISNGADINAKDKDGCTPL-HYAARYNSK 246
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 247 ETAEILI 253
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + + + ++ A+ G TPLH AA N E A++L+++GA
Sbjct: 301 TPLHFAARDNSKETAEIFIS----NGADINAKTKDGLTPLHYAANNNSKETAEILISNGA 356
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I AK +G TPLH ++ + T + L+ AD +AKD +G TPL H + S
Sbjct: 357 DINAKNEDGCTPLH----WAANNNSKETAEILISNGADINAKDKDGCTPL-HYAARYNSK 411
Query: 170 KLRELLL 176
+ E+L+
Sbjct: 412 ETAEILI 418
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 9/130 (6%)
Query: 47 MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLA 106
M PLH +A N E + + + ++ A+ G TPLH AA N E A++L++
Sbjct: 1 MDVPPLHFAARDNSKETAEIFIS----NGADINAKTKDGLTPLHYAANNNSKETAEILIS 56
Query: 107 HGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGP 166
+GA I AK NG+TPLH Y+ + T + L+ AD AKD G TP H +
Sbjct: 57 NGADINAKTKNGLTPLHWGARYNSKE----TTEILISNGADLYAKDVAGCTPF-HYAVRY 111
Query: 167 GSAKLRELLL 176
S + E+L+
Sbjct: 112 NSKETAEILI 121
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YN E + L+ + ++ A+N G TPLH AA E ++L+++GA
Sbjct: 400 TPLHYAARYNSKETAEILIS----NGADINAKNEDGCTPLHWAADYNSKETTEILISNGA 455
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
I AK +G TPLH + Y+ + T + + AD +AK G TPL
Sbjct: 456 DINAKDKDGCTPLHYAARYNSKE----TAEIFISNGADINAKTKNGLTPL 501
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A N E + L+ + ++ A+ G TPLH A+ E ++L+++GA
Sbjct: 37 TPLHYAANNNSKETAEILIS----NGADINAKTKNGLTPLHWGARYNSKETTEILISNGA 92
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ AK G TP H +V Y+ + T + L+ AD +AKD +G TPL H + S
Sbjct: 93 DLYAKDVAGCTPFHYAVRYNSKE----TAEILISNGADINAKDKDGCTPL-HFAARDNSK 147
Query: 170 KLRELLL 176
+ E+ +
Sbjct: 148 ETAEIFI 154
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH +A YN E + + + ++ A+ G TPLH A+ E ++ +++GA
Sbjct: 466 TPLHYAARYNSKETAEIFIS----NGADINAKTKNGLTPLHWGARYNSKETTEIFISNGA 521
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKD 152
I AK G TPLH +V Y+ + T + L+ AD +AKD
Sbjct: 522 DINAKDVAGCTPLHYAVRYNSKE----TAEILISNGADINAKD 560
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH A YN E + + + ++ A+++ G TPLH A + E A++L+++GA
Sbjct: 499 TPLHWGARYNSKETTEIFIS----NGADINAKDVAGCTPLHYAVRYNSKETAEILISNGA 554
Query: 110 FIEAKANN 117
I AK N
Sbjct: 555 DINAKDKN 562
>gi|297197695|ref|ZP_06915092.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197717431|gb|EDY61465.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 832
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 571 GELDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 629
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 630 YGEILASLGVLEKGHLVEVSRVDLVGEHIGSTAIRTQ 666
>gi|262200933|ref|YP_003272141.1| ATPase AAA [Gordonia bronchialis DSM 43247]
gi|262084280|gb|ACY20248.1| AAA ATPase central domain protein [Gordonia bronchialis DSM 43247]
Length = 591
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 192 SETKAKMDEL----ENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMA 247
+++ ++DE+ + ELS +GL +K Q+ K L R GL AR H+A
Sbjct: 289 ADSAPELDEMVTDAQRELSRQIGLESVKEQVAKLQSASTLARVRADRGLATSAR-SLHLA 347
Query: 248 FLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
F G PGTGKT +ARI+ ++ +G + +D+V E R D+VGE +G T KT
Sbjct: 348 FTGPPGTGKTTIARIVAKIYCGLGFIKSDKVIEATRRDMVGEHLGSTAIKT 398
>gi|322778809|gb|EFZ09225.1| hypothetical protein SINV_06859 [Solenopsis invicta]
Length = 1346
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 11/129 (8%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
TPLH++A N+ +I +LLE+ E +A G TPLH++A+ G + + LL+ H
Sbjct: 595 HTPLHIAARKNQMDIATTLLEYGAKANAESKA----GFTPLHLSAQEGHTDMSTLLIEHK 650
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLSNGPG 167
A KA NG+TPLHL ED V ++L N A AK G TPL H+++ G
Sbjct: 651 ADTNHKAKNGLTPLHLCA-----QEDKVNVASILVKNGAQIDAKTKAGYTPL-HVASHFG 704
Query: 168 SAKLRELLL 176
A + LL
Sbjct: 705 QAAMVRFLL 713
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G LL N SL TPLH++A Y + + LL+
Sbjct: 499 LHIAAKEGQEEVASVLLENNASLTATTKKGF--TPLHLAAKYGNMNVARLLLQ----KNA 552
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++AQ G TPLH+A+ A LLL GA A A NG TPLH++ R
Sbjct: 553 PVDAQGKNGVTPLHVASHYDHQNVALLLLDKGASPHAMAKNGHTPLHIAA----RKNQMD 608
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
TLLEY A +A+ G TPL HLS G + LL+ H +
Sbjct: 609 IATTLLEYGAKANAESKAGFTPL-HLSAQEGHTDMSTLLIEHKAD 652
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 40/174 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TP+HV+A + K ++V L+ N +EA+ G TPLH AA++G +E +L+ GA
Sbjct: 233 TPMHVAAKWGKIKMVNLLMSKGAN----IEAKTRDGLTPLHCAARSGHHEVVDILIEKGA 288
Query: 110 FIEAKANNGMTPLHLS-----------VWYSIRSEDYATV------------------KT 140
I +K NG+ PLH++ + Y D TV K
Sbjct: 289 PIGSKTKNGLAPLHMASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKL 348
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSET 194
LL+ NAD +A+ G TPL H++ K+ ELLL H + ++EA +E+
Sbjct: 349 LLDRNADPNARALNGFTPL-HIACKKNRIKVVELLLKH------KASIEATTES 395
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 12/177 (6%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
+ +N D +R+ T +H + + + LL+ S+ E TPLHV++
Sbjct: 350 LDRNADPNARALNGFTPLHIACKKNRIKVVELLLKHKASI--EATTESGLTPLHVASFMG 407
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
IV LL+ + + + GETPLH+AA+ + ++LL +GA ++A+A
Sbjct: 408 CMNIVIYLLQHEASPDIP----TVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQ 463
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
TPLH++ R + V LL++ A A + TPL H++ G ++ +LL
Sbjct: 464 TPLHVAS----RLGNVDIVMLLLQHGAGVDATTKDLYTPL-HIAAKEGQEEVASVLL 515
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A GD + R+L + + ++E V T LHV+A + K LL+ + A
Sbjct: 304 ASQGDHVDAARILLYHRAPVDEVT-VDYLTALHVAAHCGHVRVAKLLLDR----NADPNA 358
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS--------VWYSIRS 132
+ + G TPLH+A K + +LLL H A IEA +G+TPLH++ V Y ++
Sbjct: 359 RALNGFTPLHIACKKNRIKVVELLLKHKASIEATTESGLTPLHVASFMGCMNIVIYLLQH 418
Query: 133 E---DYATV------------------KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKL 171
E D TV + LL A A+ E +TPL H+++ G+ +
Sbjct: 419 EASPDIPTVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQTPL-HVASRLGNVDI 477
Query: 172 RELLLWH 178
LLL H
Sbjct: 478 VMLLLQH 484
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+ A +K + L++ + +++A+ G TPLH+A+ G + LL GA
Sbjct: 662 TPLHLCAQEDKVNVASILVK----NGAQIDAKTKAGYTPLHVASHFGQAAMVRFLLRSGA 717
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+++ N G TPLH + + + LLE A +A N G+T LD
Sbjct: 718 AVDSSTNAGYTPLH----QAAQQGHTLVINLLLESKAKPNAVTNNGQTALD 764
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A EIV+ LL N ++A G T LH+A+ G E +LL+ GA +
Sbjct: 41 LHLAAKDGHLEIVRKLL----NRGAIVDAATKKGNTALHIASLAGQEEVVQLLVLRGASV 96
Query: 112 EAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
A++ NG TPL+++ + S VK LL A+ + +G TPL
Sbjct: 97 NAQSQNGFTPLYMAAQENHDS----VVKYLLSKGANQTLATEDGFTPL 140
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 11/126 (8%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFI 111
LH++A + + LL N V ++ G TPLH+AA G + A LL GA I
Sbjct: 169 LHIAAKKDDCKAATLLLLNDHNPDVTSKS----GFTPLHIAAHYGNDRIASLLYDKGADI 224
Query: 112 EAKANNGMTPLHLSV-WYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK 170
A + +TP+H++ W I+ V L+ A+ AK +G TPL H + G +
Sbjct: 225 NFAAKHNITPMHVAAKWGKIK-----MVNLLMSKGANIEAKTRDGLTPL-HCAARSGHHE 278
Query: 171 LRELLL 176
+ ++L+
Sbjct: 279 VVDILI 284
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + +L +N + ++ + TPLHV++ + +A +V+ LL
Sbjct: 664 LHLCAQE-DKVNVASILVKNGAQIDAKTKA-GYTPLHVASHFGQAAMVRFLLR----SGA 717
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+++ G TPLH AA+ G LLL A A NNG T L ++
Sbjct: 718 AVDSSTNAGYTPLHQAAQQGHTLVINLLLESKAKPNAVTNNGQTALDIA 766
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
V++ A N G LH+AAK+G E + LL GA ++A G T LH++ S+ ++
Sbjct: 28 VDINASNANGLNALHLAAKDGHLEIVRKLLNRGAIVDAATKKGNTALHIA---SLAGQE- 83
Query: 136 ATVKTLLEYNADCSAKDNEGKTPL 159
V+ L+ A +A+ G TPL
Sbjct: 84 EVVQLLVLRGASVNAQSQNGFTPL 107
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L ++LL N + + T LH+++ + E+V+ LL G
Sbjct: 41 LHLAAKDGHLEIVRKLL--NRGAIVDAATKKGNTALHIASLAGQEEVVQ-LLVLRG---A 94
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
+ AQ+ G TPL+MAA+ + K LL+ GA +G TPL +++ + D
Sbjct: 95 SVNAQSQNGFTPLYMAAQENHDSVVKYLLSKGANQTLATEDGFTPLAVAMQ---QGHD-K 150
Query: 137 TVKTLLEYNADCSAKDNEGKT--PLDHLSNGPGSAKLRELLL 176
V LLE D+ GK P H++ K LLL
Sbjct: 151 VVAVLLE-------NDSRGKVRLPALHIAAKKDDCKAATLLL 185
>gi|123417283|ref|XP_001305065.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886560|gb|EAX92135.1| hypothetical protein TVAG_419400 [Trichomonas vaginalis G3]
Length = 434
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPL +++ Y +IV+ L+ G +K E++ G+TPL +AA++GC E K L++
Sbjct: 308 GKTPLIMASYYGYIDIVEYLISI-GCNKEEMDKD---GKTPLSLAAEHGCIEVVKYLVSI 363
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
GA +EAK G TPL L+ +Y + +K L+ A+ A DN+GKTPLD+
Sbjct: 364 GANVEAKDKYGKTPLLLASYY----DHLDVIKYLISIGANKDAIDNDGKTPLDY 413
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 8/110 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPL +A E+VK L+ N + A+ G +P+ +A+K G E K L++ G
Sbjct: 244 TPLIWAAHNGHLEVVKYLISIGAN----INAETDDGSSPIIVASKEGHLEIVKYLISAGV 299
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
E K +G TPL ++ +Y V+ L+ + D +GKTPL
Sbjct: 300 NKEGKNKDGKTPLIMASYYGYID----IVEYLISIGCNKEEMDKDGKTPL 345
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 85 GETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEY 144
G TPL AA NG E K L++ GA I A+ ++G +P+ ++ + VK L+
Sbjct: 242 GYTPLIWAAHNGHLEVVKYLISIGANINAETDDGSSPIIVAS----KEGHLEIVKYLISA 297
Query: 145 NADCSAKDNEGKTPL 159
+ K+ +GKTPL
Sbjct: 298 GVNKEGKNKDGKTPL 312
>gi|371721783|gb|AEX55214.1| ankyrin domain protein [Wolbachia pipientis]
Length = 507
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ ++ TPLH+AA NG + K L+A GA
Sbjct: 270 TPLHLAAEANHIEVVKILVE-----KADVNIKDADRWTPLHVAAANGHEDVVKTLIAKGA 324
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK + TPLH ++ ++ VK LLE AD S KD +GKTP D L+ G
Sbjct: 325 KVKAKNGDRHTPLH----FAAQNGHEGIVKVLLEAGADPSLKDVDGKTPRD-LTKDQGII 379
Query: 170 KLRE 173
+L E
Sbjct: 380 QLLE 383
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK+L+E K ++ ++ TPLH+AA NG + +L GA
Sbjct: 172 TPLHLAAEANHIEVVKTLVE-----KADVNIKDADRWTPLHVAAANGHEDVVTILTGKGA 226
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK ++G TPLHL+ + V+TL+ + +A+D++ TPL HL+
Sbjct: 227 IVDAKNSDGWTPLHLAAANGHKD----VVETLIANKVNVNAEDDDRCTPL-HLAAEANHI 281
Query: 170 KLRELLL 176
++ ++L+
Sbjct: 282 EVVKILV 288
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y EIV+ L + G + ++A++ G TPLH+A N + + L+A+
Sbjct: 105 TPLHLAAHYGHKEIVQVLSKAEG---INVDAKDSDGWTPLHLATANSHKDVVETLIANKV 161
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ ++ TPLHL+ + VKTL+E AD + KD + TPL H++ G
Sbjct: 162 NVNAEDDDRCTPLHLAA----EANHIEVVKTLVE-KADVNIKDADRWTPL-HVAAANGHE 215
Query: 170 KLRELL 175
+ +L
Sbjct: 216 DVVTIL 221
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL-AHGAF 110
LH ++ +N A + K+L+E + ++ A++ TPLH+AA G E ++L A G
Sbjct: 74 LHFASYWNCANVAKALIE----NGADINAEHDNKITPLHLAAHYGHKEIVQVLSKAEGIN 129
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
++AK ++G TPLHL+ S + V+TL+ + +A+D++ TPL HL+
Sbjct: 130 VDAKDSDGWTPLHLATANSHKD----VVETLIANKVNVNAEDDDRCTPL-HLA 177
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
QN LH A+ C AK L+ +GA I A+ +N +TPLHL+ Y + V+
Sbjct: 66 QNSQEVKLLHFASYWNCANVAKALIENGADINAEHDNKITPLHLAAHYGHKE----IVQV 121
Query: 141 LLEYNA-DCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
L + + AKD++G TPL HL+ + E L+
Sbjct: 122 LSKAEGINVDAKDSDGWTPL-HLATANSHKDVVETLI 157
>gi|345852123|ref|ZP_08805075.1| hypothetical protein SZN_20162 [Streptomyces zinciresistens K42]
gi|345636403|gb|EGX57958.1| hypothetical protein SZN_20162 [Streptomyces zinciresistens K42]
Length = 812
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 551 GELDALVGLDSVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 609
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 610 YGEILASLGVLEQGHLVEVSRVDLVGEHIGSTAIRTQ 646
>gi|402073775|gb|EJT69327.1| hypothetical protein GGTG_12946 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1524
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H AQ G A + L+ E +TPLH +A E V LL G DK
Sbjct: 1375 LHLAAQKGHEAAARLLVEAGAD--KEAKDRYKRTPLHWAA-LGGHEAVARLLVEAGADK- 1430
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
EA+N G TPLH AA G AKLL+ GA EAK ++G TPLH W +++ + A
Sbjct: 1431 --EAKNDSGRTPLHWAALGGHKAVAKLLVEAGADKEAKNDSGWTPLH---WAALKGHE-A 1484
Query: 137 TVKTLLEYNADCSAKDNEGKTPLD 160
+ L+E D AKD +G+TPLD
Sbjct: 1485 VARLLVEAGVDKEAKDKDGRTPLD 1508
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 10/159 (6%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
++++ +++ R T+ A + RLL+ +RN +TPLH++A
Sbjct: 1293 LRQDANKKLRDHYGRTVLHLAAVAGMAEVVRLLKGAEKEAKDRN---GRTPLHLAAQKGH 1349
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMT 120
+ + L G +K EA+++ G+TPLH+AA+ G AA+LL+ GA EAK T
Sbjct: 1350 EAVARLLAAELGAEK---EAKDLGGQTPLHLAAQKGHEAAARLLVEAGADKEAKDRYKRT 1406
Query: 121 PLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 159
PLH W ++ + A + L+E AD AK++ G+TPL
Sbjct: 1407 PLH---WAALGGHE-AVARLLVEAGADKEAKNDSGRTPL 1441
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 1 MQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNK 60
++++ +++ R T+ A + RLL+ +RN +TPLH++A
Sbjct: 1157 LRQDANKKLRDHYGRTVLHLAAVAGMAEVVRLLKGAEKEAKDRN---GRTPLHLAAQKGH 1213
Query: 61 AEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAK------ 114
+ + L G +K EA+++ G+TPLH+AA+ G AA+LL+ GA EAK
Sbjct: 1214 EAVARLLAAELGAEK---EAKDLGGQTPLHLAAQKGHEAAARLLVEAGADKEAKDPLNVL 1270
Query: 115 ANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLREL 174
+G TPLH + + + + V L +A+ +D+ G+T L HL+ G A++ L
Sbjct: 1271 DASGTTPLHWAAY-----DGHKDVVEYLRQDANKKLRDHYGRTVL-HLAAVAGMAEVVRL 1324
Query: 175 LLWHSEEQRKR 185
L +E + R
Sbjct: 1325 LKGAEKEAKDR 1335
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 28 AFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGET 87
A RLL E + +N +TPLH +A + K L+E G DK EA+N G T
Sbjct: 1418 AVARLLVEAGADKEAKND-SGRTPLHWAALGGHKAVAKLLVE-AGADK---EAKNDSGWT 1472
Query: 88 PLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHL 124
PLH AA G A+LL+ G EAK +G TPL L
Sbjct: 1473 PLHWAALKGHEAVARLLVEAGVDKEAKDKDGRTPLDL 1509
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 10/129 (7%)
Query: 33 LRENPSLLNERNP--VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
LRE N+ NP + TPLH +A +L + ++ ++ G TPLH
Sbjct: 1022 LREVLERGNDANPKDIHDWTPLHYAAATGSDTGTTEILL---KCRADVNPIDLLGWTPLH 1078
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
A + G A ++LL GA + +GM PLH + V+ L E A +
Sbjct: 1079 YACQTGRTAAVQILLIRGAE-HVRGKDGMAPLHCAA----MGGHLDVVRQLTESGAALNV 1133
Query: 151 KDNEGKTPL 159
D G TPL
Sbjct: 1134 LDASGTTPL 1142
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 44 NPV--MAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAA 101
NP+ + TPLH + + V+ LL G + V + G PLH AA G +
Sbjct: 1067 NPIDLLGWTPLHYACQTGRTAAVQILLI-RGAEHV----RGKDGMAPLHCAAMGGHLDVV 1121
Query: 102 KLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 161
+ L GA + +G TPLH + + + + V L +A+ +D+ G+T L H
Sbjct: 1122 RQLTESGAALNVLDASGTTPLHWAAY-----DGHKDVVEYLRQDANKKLRDHYGRTVL-H 1175
Query: 162 LSNGPGSAKLRELLLWHSEEQRKR 185
L+ G A++ LL +E + R
Sbjct: 1176 LAAVAGMAEVVRLLKGAEKEAKDR 1199
>gi|160286023|pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N ++ TPLH++A EIV+ LL+ ++ A++ G TPLH
Sbjct: 31 RILMANGADVNAKDK-DGYTPLHLAAREGHLEIVEVLLKAG----ADVNAKDKDGYTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA+ G E ++LL GA + AK +G TPLHL+ R V+ LL+ AD +A
Sbjct: 86 LAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA----REGHLEIVEVLLKAGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A++ G TPLH+AA+ G E ++LL GA + AK +G TPLHL+ R
Sbjct: 39 DVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAA----REGHLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
V+ LL+ AD +AKD +G TPL HL+ G ++ E+LL
Sbjct: 95 IVEVLLKAGADVNAKDKDGYTPL-HLAAREGHLEIVEVLL 133
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + AK +G TPLHL+ R V+ LL+ AD +AK
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAA----REGHLEIVEVLLKAGADVNAK 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLL 176
D +G TPL HL+ G ++ E+LL
Sbjct: 77 DKDGYTPL-HLAAREGHLEIVEVLL 100
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H A+ G L + LL+ + N ++ TPLH++A EIV+ LL+
Sbjct: 51 LHLAAREGHLEIVEVLLKAGADV-NAKDK-DGYTPLHLAAREGHLEIVEVLLKAG----A 104
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A++ G TPLH+AA+ G E ++LL GA + A+ G T +S+ +ED A
Sbjct: 105 DVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNG--NEDLA 162
Query: 137 TV 138
+
Sbjct: 163 EI 164
>gi|391336586|ref|XP_003742660.1| PREDICTED: uncharacterized protein LOC100897299 [Metaseiulus
occidentalis]
Length = 707
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
Query: 16 TIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDK 75
+IH A++GDL + L+R + +E TPLH++A Y +IVK L ++
Sbjct: 515 SIHDAARTGDLHVIKLLIRRDKKRWSETVDERGWTPLHLAAAYGHTDIVKFLC----SEG 570
Query: 76 VELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDY 135
+ A + G T +H+AA NG + ++LL GA ++ +A++G TPLHL+ +
Sbjct: 571 AHIRALDPTGYTSMHVAAMNGNDACLQVLLKMGADVDNEASDGFTPLHLATL----NNHA 626
Query: 136 ATVKTLLEYNADCSAKDNEGKTPLD 160
VKTLL + A+ +D G+T D
Sbjct: 627 DCVKTLLTWGANMGREDALGRTIQD 651
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 79 EAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATV 138
E + G TPLH+AA G + K L + GA I A G T +H++ + A +
Sbjct: 541 ETVDERGWTPLHLAAAYGHTDIVKFLCSEGAHIRALDPTGYTSMHVAAMNG----NDACL 596
Query: 139 KTLLEYNADCSAKDNEGKTPLDHLSNGPGSAK-LRELLLW 177
+ LL+ AD + ++G TPL HL+ A ++ LL W
Sbjct: 597 QVLLKMGADVDNEASDGFTPL-HLATLNNHADCVKTLLTW 635
>gi|392935567|pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A EIV+ LL+ ++ A++ G TPLH
Sbjct: 31 RILMANGADVNAHDD-QGSTPLHLAAWIGHPEIVEVLLKH----GADVNARDTDGWTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA NG E ++LL +GA + A+ G+TPLHL+ + R V+ LL++ AD +A
Sbjct: 86 LAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLA---ADRGH-LEIVEVLLKHGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
++ A + G TPLH+AA G E ++LL HGA + A+ +G TPLHL+ +
Sbjct: 39 DVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAA----DNGHLE 94
Query: 137 TVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
V+ LL+Y AD +A+D G TPL HL+ G ++ E+LL H +
Sbjct: 95 IVEVLLKYGADVNAQDAYGLTPL-HLAADRGHLEIVEVLLKHGAD 138
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A + G TPLHL+ W V+ LL++ AD +A+
Sbjct: 21 AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPE----IVEVLLKHGADVNAR 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRA 187
D +G TPL HL+ G ++ E+LL + + + A
Sbjct: 77 DTDGWTPL-HLAADNGHLEIVEVLLKYGADVNAQDA 111
>gi|322711446|gb|EFZ03019.1| Ankyrin [Metarhizium anisopliae ARSEF 23]
Length = 1398
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 4 NQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEI 63
NQD R + G + + L ++ PS ++ N +TP+HV++ ++
Sbjct: 1170 NQDERGQIPLFMACEGVSPTTVLAVLEQGF--PPSFTDKLN----RTPMHVASSIGATDV 1223
Query: 64 VKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLH 123
V+ +L G+ EAQ+ G TPLH+AA G LLA GAF + N+ TPLH
Sbjct: 1224 VQLILSKGGDP----EAQDDKGITPLHLAAFGGWTGVVDELLASGAFTDVTTNDQQTPLH 1279
Query: 124 LSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
+ + V TLL A+ AKD+EG TPL H++ GS +LLL
Sbjct: 1280 FAC--ESPNPSLEVVFTLLRRQANPYAKDSEGMTPL-HIAVRNGSVATVQLLL 1329
>gi|289445470|ref|ZP_06435214.1| ATPase [Mycobacterium tuberculosis CPHL_A]
gi|289418428|gb|EFD15629.1| ATPase [Mycobacterium tuberculosis CPHL_A]
Length = 573
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL +GL +K Q+ ++ L+ R A G+KV A+ HM F G PGTGKT +
Sbjct: 285 EAQAELDRQIGLTRVKNQIERYRAATLMARVRAAKGMKV-AQPSKHMIFTGPPGTGKTTI 343
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
AR++ +L +G++ ++ E R D V E+ G + KT + + L
Sbjct: 344 ARVVANILAGLGVIAEPKLVETSRKDFVAEYEGQSAVKTAKTIDQAL 390
>gi|123191323|ref|XP_001282483.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121839778|gb|EAX69553.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 245
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVK 65
D ++ AT CA + + +L N + LN ++ A TPLH +A N E +
Sbjct: 62 DLNAKGKDEATPLHCAANNNSKETAEILISNGADLNAKDKDEA-TPLHCAANNNSKETAE 120
Query: 66 SLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
L+ + ++ A++ TPLH AA N E A++L+++GA I AK +G TPLH +
Sbjct: 121 ILIS----NGADINAKDKDEATPLHYAANNNSKETAEILISNGADINAKDEDGCTPLHYA 176
Query: 126 VWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
Y+ R E T + L+ AD +AKD + TPL ++ S + E+L+
Sbjct: 177 ARYN-RKE---TAEILISNGADLNAKDKDEATPLHWVAQHNNSKETAEILI 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 20 CAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELE 79
CA + + +L N + +N ++ A TPLH +A N E + + + V+L
Sbjct: 10 CAANNNSKETAEILISNGADINAKDKDEA-TPLHWAARDNSKETAEIFIS----NGVDLN 64
Query: 80 AQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVK 139
A+ TPLH AA N E A++L+++GA + AK + TPLH + + + T +
Sbjct: 65 AKGKDEATPLHCAANNNSKETAEILISNGADLNAKDKDEATPLHCAANNNSKE----TAE 120
Query: 140 TLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
L+ AD +AKD + TPL + +N S + E+L+
Sbjct: 121 ILISNGADINAKDKDEATPLHYAANN-NSKETAEILI 156
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH-MAAKNGCNEAAKLLLAHG 108
TPLH +A YN+ E + L+ + +L A++ TPLH +A N E A++L+++G
Sbjct: 171 TPLHYAARYNRKETAEILIS----NGADLNAKDKDEATPLHWVAQHNNSKETAEILISNG 226
Query: 109 AFIEAKANNGMTPLHL 124
A I AK M P L
Sbjct: 227 ADINAKNKKWMDPSSL 242
>gi|313680819|ref|YP_004058558.1| ankyrin [Oceanithermus profundus DSM 14977]
gi|313153534|gb|ADR37385.1| Ankyrin [Oceanithermus profundus DSM 14977]
Length = 534
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 5/128 (3%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCN-EAAKLLLAHG 108
TP+H +A N+ E V +L + LEA++ GETPLH+AA+ G +A LLL G
Sbjct: 233 TPVHAAAALNEGEGVADVLAALLDAGGSLEARSGIGETPLHLAARVGGRPKAVALLLDRG 292
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A + A+ +G TPLH + ++ A V+ L AD +A+D E KTPL L++ GS
Sbjct: 293 ADVAARDEDGWTPLH----GAATADSTAVVRLLARAGADVNARDLEQKTPLLLLADWGGS 348
Query: 169 AKLRELLL 176
++ LL+
Sbjct: 349 IEVARLLV 356
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 29 FQRLLREN---PSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLE-WPGNDKVELEAQNMY 84
+ LLRE P L+++ +TPLH++A + +++ +++ W + L+ ++
Sbjct: 41 LEPLLRETAGWPDLVDDEG----ETPLHLAARFANPAVLEVVIDGWRAAGR-SLDPRDGE 95
Query: 85 GETPLHMAAKNGCNEAA-KLLLAHGAFIEAKANNGM--TPLHLSVWYSIRSEDYATVKTL 141
TPL AA + + A +LL+A GA + + NG+ TPLHL+ + E V+ L
Sbjct: 96 AFTPLMRAAADNPDPGALRLLVAAGA--DVRLTNGLDETPLHLAARLNPEPE---AVREL 150
Query: 142 LEYNADCSAKDNEGKTPL 159
+ AD A D +G TP
Sbjct: 151 VRLGADLEAVDADGWTPF 168
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+HG A + D A RLL + +N R+ + +TPL + A + + V LL G D
Sbjct: 306 LHGAATA-DSTAVVRLLARAGADVNARD-LEQKTPLLLLADWGGSIEVARLLVELGADPA 363
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYA 136
A+ + + LH AA G + K + G A+ + G TPLH++ + +D
Sbjct: 364 ---ARGRWNWSALHFAAAQGSPDL-KAWVRLGLDPAARNDLGETPLHVA---ARLGDDSG 416
Query: 137 TVKTLLEYNADCSAKDNEGKTPL 159
T++ L+ AD A+D +G TP
Sbjct: 417 TLRELVLLGADLEARDGDGWTPF 439
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 15 ATIHGCAQSG--DLLAFQRLLRENPSLLNERNPVMAQTPLHVSA--GYNKAEIVKSLLEW 70
+ +H A G DL A+ RL +P+ N+ + +TPLHV+A G + + + +L
Sbjct: 371 SALHFAAAQGSPDLKAWVRL-GLDPAARND----LGETPLHVAARLGDDSGTLRELVLL- 424
Query: 71 PGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSI 130
+LEA++ G TP AA+ G A + L GA + A++ G LHL+ +
Sbjct: 425 ----GADLEARDGDGWTPFLAAARAGNGAALRALAELGADVNARSKLGRNALHLAALF-- 478
Query: 131 RSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGP 166
+ED A L+E + +D G P + L P
Sbjct: 479 -AEDEAVPTLLIELDVAAVVQDAAGAYPWNLLMKNP 513
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 49 QTPLHVSAGYN-KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
+TPLH++A N + E V+ L+ +LEA + G TP AA +G + +LL
Sbjct: 131 ETPLHLAARLNPEPEAVRELVRL----GADLEAVDADGWTPFLSAASSGRADKIAVLLEA 186
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL---DHLSN 164
GA +A++G T LHL+ + + D V+ LL D A D +G TP+ L+
Sbjct: 187 GARTGVRADDGATALHLA---AAAAPDAEAVRRLLGAGLDPKATDGDGWTPVHAAAALNE 243
Query: 165 GPGSAKLRELLL 176
G G A + LL
Sbjct: 244 GEGVADVLAALL 255
>gi|307184783|gb|EFN71097.1| Ankyrin-2 [Camponotus floridanus]
Length = 4208
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 48 AQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAH 107
TPLH++A N+ +I +LLE+ E +A G TPLH++A+ G + + LL+ H
Sbjct: 514 GHTPLHIAARKNQMDIATTLLEYGAKANAESKA----GFTPLHLSAQEGHTDMSTLLIEH 569
Query: 108 GAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYN-ADCSAKDNEGKTPLDHLSNGP 166
A KA NG+TPLHL ED V ++L N A AK G TPL H+++
Sbjct: 570 KADTNHKAKNGLTPLHLCA-----QEDKVNVASILVKNGAQIDAKTKAGYTPL-HVASHF 623
Query: 167 GSAKLRELLL 176
G A + LL
Sbjct: 624 GQAAMVRFLL 633
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 9/136 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y + + LL+ ++AQ G TPLH+A+ A LLL GA
Sbjct: 450 TPLHLAAKYGNMNVARLLLQ----KNAPVDAQGKNGVTPLHVASHYDHQNVALLLLDKGA 505
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
A A NG TPLH++ R TLLEY A +A+ G TPL HLS G
Sbjct: 506 SPHAMAKNGHTPLHIAA----RKNQMDIATTLLEYGAKANAESKAGFTPL-HLSAQEGHT 560
Query: 170 KLRELLLWHSEEQRKR 185
+ LL+ H + +
Sbjct: 561 DMSTLLIEHKADTNHK 576
Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats.
Identities = 63/177 (35%), Positives = 86/177 (48%), Gaps = 20/177 (11%)
Query: 6 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQ----TPLHVSAGYNKA 61
D R + PA +H A+ D A LL+ N+ NP + TPLH++A Y
Sbjct: 79 DTRGKVRLPA-LHIAAKKDDCKAAALLLQ------NDHNPDVTSKSGFTPLHIAAHYGND 131
Query: 62 EIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTP 121
I SLL G D V A+ + TP+H+AAK G + LL++ GA IEAK +G+TP
Sbjct: 132 RIA-SLLYDRGAD-VNFAAK--HNITPMHVAAKWGKIKMVNLLMSKGANIEAKTRDGLTP 187
Query: 122 LHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 178
LH + RS + V L+E A +K G PL S G R +LL+H
Sbjct: 188 LHCAA----RSGHHEVVDILIEKGAPIGSKTKNGLAPLHMASQGDHVDAAR-ILLYH 239
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 84/174 (48%), Gaps = 40/174 (22%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TP+HV+A + K ++V L+ N +EA+ G TPLH AA++G +E +L+ GA
Sbjct: 153 TPMHVAAKWGKIKMVNLLMSKGAN----IEAKTRDGLTPLHCAARSGHHEVVDILIEKGA 208
Query: 110 FIEAKANNGMTPLHLS-----------VWYSIRSEDYATV------------------KT 140
I +K NG+ PLH++ + Y D TV K
Sbjct: 209 PIGSKTKNGLAPLHMASQGDHVDAARILLYHRAPVDEVTVDYLTALHVAAHCGHVRVAKL 268
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEEQRKRRALEACSET 194
LL+ NAD +A+ G TPL H++ K+ ELLL H + ++EA +E+
Sbjct: 269 LLDRNADPNARALNGFTPL-HIACKKNRIKVVELLLKH------KASIEATTES 315
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 1 MQKNQDRRSRSAKPAT-IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYN 59
+ +N D +R+ T +H + + + LL+ S+ E TPLHV++
Sbjct: 270 LDRNADPNARALNGFTPLHIACKKNRIKVVELLLKHKASI--EATTESGLTPLHVASFMG 327
Query: 60 KAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGM 119
IV LL+ + + + GETPLH+AA+ + ++LL +GA ++A+A
Sbjct: 328 CMNIVIYLLQHEASPDIP----TVRGETPLHLAARANQTDIIRILLRNGAQVDARAREEQ 383
Query: 120 TPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHS 179
TPLH++ R + V LL++ A A + TPL H++ G ++ +LL +S
Sbjct: 384 TPLHVAS----RLGNVDIVMLLLQHGAGVDATTKDLYTPL-HIAAKEGQEEVASVLLENS 438
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH+ A +K + L++ + +++A+ G TPLH+A+ G + LL GA
Sbjct: 582 TPLHLCAQEDKVNVASILVK----NGAQIDAKTKAGYTPLHVASHFGQAAMVRFLLRSGA 637
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLD 160
+++ N G TPLH + + + LLE A +A N G+T LD
Sbjct: 638 AVDSSTNAGYTPLHQAA----QQGHTLVINLLLESKAKPNAVTNNGQTALD 684
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 21 AQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEA 80
A GD + R+L + + ++E V T LHV+A + K LL+ + A
Sbjct: 224 ASQGDHVDAARILLYHRAPVDEVT-VDYLTALHVAAHCGHVRVAKLLLD----RNADPNA 278
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
+ + G TPLH+A K + +LLL H A IEA +G+TPLH++ + + V
Sbjct: 279 RALNGFTPLHIACKKNRIKVVELLLKHKASIEATTESGLTPLHVASFMGCMN----IVIY 334
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
LL++ A G+TPL HL+ + +LL
Sbjct: 335 LLQHEASPDIPTVRGETPL-HLAARANQTDIIRILL 369
Score = 46.2 bits (108), Expect = 0.018, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 17 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKV 76
+H CAQ D + +L +N + ++ + TPLHV++ + +A +V+ LL
Sbjct: 584 LHLCAQE-DKVNVASILVKNGAQIDAKTKA-GYTPLHVASHFGQAAMVRFLLR----SGA 637
Query: 77 ELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLS 125
+++ G TPLH AA+ G LLL A A NNG T L ++
Sbjct: 638 AVDSSTNAGYTPLHQAAQQGHTLVINLLLESKAKPNAVTNNGQTALDIA 686
>gi|424945743|ref|ZP_18361439.1| hypothetical protein NCGM2209_0348 [Mycobacterium tuberculosis
NCGM2209]
gi|358230258|dbj|GAA43750.1| hypothetical protein NCGM2209_0348 [Mycobacterium tuberculosis
NCGM2209]
Length = 569
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL +GL +K Q+ ++ L+ R A G+KV A+ HM F G PGTGKT +
Sbjct: 281 EAQAELDRQIGLTRVKNQIERYRAATLMARVRAAKGMKV-AQPSKHMIFTGPPGTGKTTI 339
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
AR++ +L +G++ ++ E R D V E+ G + KT + + L
Sbjct: 340 ARVVANILAGLGVIAEPKLVETSRKDFVAEYEGQSAVKTAKTIDQAL 386
>gi|160331319|ref|XP_001712367.1| cbbx [Hemiselmis andersenii]
gi|159765815|gb|ABW98042.1| cbbx [Hemiselmis andersenii]
Length = 390
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 201 LENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP-HMAFLGNPGTGKTMV 259
LE +++VGL +K ++R+ A +++D+ R+ LGL P HM F G PGTGKT V
Sbjct: 108 LEKLDTDLVGLIPVKSRVREIAALLVVDKLRRNLGLDTSV--PSLHMCFTGAPGTGKTTV 165
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
A +G++L +G + + R DLVG++VGHT PKT+
Sbjct: 166 AMRMGQILQRMGYSRSGHLVVATRDDLVGQYVGHTAPKTK 205
>gi|123393668|ref|XP_001300436.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121881476|gb|EAX87506.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 429
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH+S +N K+ +E+ + ++ +Q+ G+T LH++AK N+ + L++HG
Sbjct: 239 ETPLHISGFHNN----KTFIEFLLSHGADINSQDDDGDTVLHLSAKRNKNDMVEFLISHG 294
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I G TPLH SV+ + + + K L+ + AD + KD G+T L HL+ +
Sbjct: 295 ANINVMNIQGQTPLHFSVF----NNNLESTKVLILHGADVNKKDFYGQTAL-HLTTFNDN 349
Query: 169 AKLRELLLWH 178
++ ELL+ H
Sbjct: 350 KEIAELLILH 359
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
T L++ A N E+ + L+ E+ A++ G T LH+AAK C + A++L+ HGA
Sbjct: 174 TALNICASKNLYELAEFLILHGA----EVNAKDNDGSTALHLAAKMNCCKTAEVLILHGA 229
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
I A+ N G TPLH+S +++ ++ ++ LL + AD +++D++G T L HLS
Sbjct: 230 DINARDNRGETPLHISGFHNNKT----FIEFLLSHGADINSQDDDGDTVL-HLSAKRNKN 284
Query: 170 KLRELLLWH 178
+ E L+ H
Sbjct: 285 DMVEFLISH 293
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 8/134 (5%)
Query: 46 VMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL 105
+ QTPLH S N E K L+ G D + ++ YG+T LH+ N E A+LL+
Sbjct: 302 IQGQTPLHFSVFNNNLESTKVLI-LHGAD---VNKKDFYGQTALHLTTFNDNKEIAELLI 357
Query: 106 AHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 165
HGA I AK N T LH S Y+ S + A K L+ + D AKD G+T ++H +
Sbjct: 358 LHGADINAKDNMNQTTLHYSADYN--SGEIA--KLLISHGVDIDAKDCSGETAMNHAARK 413
Query: 166 PGSAKLRELLLWHS 179
+++L+ + S
Sbjct: 414 NHRYIIKQLIPYCS 427
>gi|294628028|ref|ZP_06706588.1| sporulation protein K [Streptomyces sp. e14]
gi|292831361|gb|EFF89710.1| sporulation protein K [Streptomyces sp. e14]
Length = 814
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 203 NELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARI 262
EL +VGL +K ++R + + RR+ GLK + + H+ F G+PGTGKT VAR+
Sbjct: 553 GELDALVGLESVKREVRALTDMIEVGRRRQQAGLKAASVKR-HLVFTGSPGTGKTTVARL 611
Query: 263 LGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
G +L +G+L + EV R DLVGE +G T +T+
Sbjct: 612 YGEILASLGVLERGHLVEVSRVDLVGEHIGSTAIRTQ 648
>gi|260889961|ref|ZP_05901224.1| stage V sporulation protein K [Leptotrichia hofstadii F0254]
gi|260860567|gb|EEX75067.1| stage V sporulation protein K [Leptotrichia hofstadii F0254]
Length = 363
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 198 MDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKT 257
+ EL EL+N++GL +K ++ + + R+ GL + H++F GNPGTGKT
Sbjct: 97 LTELLEELNNLIGLKNVKSKVNDLIIYQKVQKMRQKEGLN-AVKSTLHLSFTGNPGTGKT 155
Query: 258 MVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
VARI+GR+ +G+L EV RTDL+ + G T K + +
Sbjct: 156 TVARIIGRIYKQLGLLSRGHFIEVSRTDLIAGYQGQTALKVKNVI 200
>gi|403739475|ref|ZP_10951856.1| putative ATPase [Austwickia chelonae NBRC 105200]
gi|403190678|dbj|GAB78626.1| putative ATPase [Austwickia chelonae NBRC 105200]
Length = 517
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 186 RALEACSE-TKAKMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPP 244
R +EA E + +DEL EL ++GL +K ++ + + ++ +R+ GL+ A
Sbjct: 220 RPVEAQEEHPERSLDELLGELDALIGLAAVKREVHRQVALLAVEAKRERAGLR-SAPLTR 278
Query: 245 HMAFLGNPGTGKTMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKT 298
H+ F+GNPGTGKT VAR++G + +G+L T ++ EV R++LV ++G T KT
Sbjct: 279 HLVFVGNPGTGKTTVARLVGGIYRAMGLLSTGQLVEVDRSELVAGYLGQTAQKT 332
>gi|410864930|ref|YP_006979541.1| Stage V sporulation protein K [Propionibacterium acidipropionici
ATCC 4875]
gi|410821571|gb|AFV88186.1| Stage V sporulation protein K [Propionibacterium acidipropionici
ATCC 4875]
Length = 1146
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 197 KMDELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGK 256
+DEL EL ++GL +K +R + D+R G + ++ HM F GNPGTGK
Sbjct: 882 SVDELLGELDAMIGLAPVKAFVRDLVVQVQADQRLARAG-RPASQPSYHMVFEGNPGTGK 940
Query: 257 TMVARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRV 302
T VA I+ +L +GIL V V+R DLVG +VGHT +T R +
Sbjct: 941 TTVAAIVAKLFGALGILEKPTVKTVERRDLVGAWVGHTEQQTGRAI 986
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 205 LSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMVARILG 264
+ + GL +K Q+R++ + + +++R+A G G H FLG+PGTGKT VAR+LG
Sbjct: 619 IEALTGLASVKTQIRRFLRTVEFNQQREAQGHH-GVEMTLHSLFLGSPGTGKTTVARLLG 677
Query: 265 RLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTR 299
+ L G + +D EV + DLV +G T KTR
Sbjct: 678 KALARAGAINSDVFVEVGQEDLVSPNIGETPQKTR 712
>gi|123408578|ref|XP_001303225.1| ankyrin repeat protein [Trichomonas vaginalis G3]
gi|121884587|gb|EAX90295.1| ankyrin repeat protein, putative [Trichomonas vaginalis G3]
Length = 418
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A N E + L+ ++ A++ Y TPLH AA + E A++L++HG
Sbjct: 206 ETPLHKAAYSNSKETAEVLISHGA----DINARDKYKRTPLHKAAYSNSKETAEVLISHG 261
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I A+ + TPLH + YSI E T + L+ + AD +A+D KTPL H + S
Sbjct: 262 ADINARDEDEKTPLH-NAAYSISKE---TAEVLISHGADINARDEHEKTPL-HYAAYSNS 316
Query: 169 AKLRELLLWHSEEQRKR 185
+ E+L+ H + R
Sbjct: 317 KETAEVLISHGADINAR 333
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 49 QTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHG 108
+TPLH +A Y+ ++ +L G D + A++ + +TPLH AA + E A++L++HG
Sbjct: 272 KTPLH-NAAYSISKETAEVLISHGAD---INARDEHEKTPLHYAAYSNSKETAEVLISHG 327
Query: 109 AFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGS 168
A I A+ TPLH + + S T + L+ Y AD +A+D + +TPL H + S
Sbjct: 328 ADINARDKYKETPLHKAAF----SNSKETAEVLISYGADINARDEDEETPL-HYAAYSNS 382
Query: 169 AKLRELLLWH 178
+ E+L+ H
Sbjct: 383 KETAEVLISH 392
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 58 YNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANN 117
Y+ + SL+++ + ++ A++ TPLH AA + E A++L++HGA I A+ N
Sbjct: 145 YSSYFFLPSLIKYFISHGADINARDKNKRTPLHNAAYSNSKETAEVLISHGADINARDKN 204
Query: 118 GMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLW 177
TPLH + + S T + L+ + AD +A+D +TPL H + S + E+L+
Sbjct: 205 KETPLHKAAY----SNSKETAEVLISHGADINARDKYKRTPL-HKAAYSNSKETAEVLIS 259
Query: 178 HSEEQRKR 185
H + R
Sbjct: 260 HGADINAR 267
>gi|453055747|pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 10/145 (6%)
Query: 31 RLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLH 90
R+L N + +N + TPLH++A Y EIV+ LL+ ++ A ++ G TPLH
Sbjct: 31 RILMANGADVNATDA-SGLTPLHLAATYGHLEIVEVLLKHGA----DVNAIDIXGSTPLH 85
Query: 91 MAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSA 150
+AA G E ++LL HGA + A G TPLHL+ V+ LL++ AD +A
Sbjct: 86 LAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMG----HLEIVEVLLKHGADVNA 141
Query: 151 KDNEGKTPLDHLSNGPGSAKLRELL 175
+D GKT D +S G+ L E+L
Sbjct: 142 QDKFGKTAFD-ISIDNGNEDLAEIL 165
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 92 AAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK 151
AA+ G ++ ++L+A+GA + A +G+TPLHL+ Y V+ LL++ AD +A
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYG----HLEIVEVLLKHGADVNAI 76
Query: 152 DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 181
D G TPL HL+ G ++ E+LL H +
Sbjct: 77 DIXGSTPL-HLAALIGHLEIVEVLLKHGAD 105
>gi|371721785|gb|AEX55215.1| ankyrin domain protein, partial [Wolbachia pipientis]
Length = 460
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK L+E K ++ ++ TPLH+AA NG + K L+A GA
Sbjct: 241 TPLHLAAEANHIEVVKILVE-----KADVNIKDADRWTPLHVAAANGHEDVVKTLIAKGA 295
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK + TPLH ++ ++ VK LLE AD S KD +GKTP D L+ G
Sbjct: 296 KVKAKNGDRHTPLH----FAAQNGHEGIVKVLLEAGADPSLKDVDGKTPRD-LTKDQGII 350
Query: 170 KLRE 173
+L E
Sbjct: 351 QLLE 354
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A N E+VK+L+E K ++ ++ TPLH+AA NG + +L GA
Sbjct: 143 TPLHLAAEANHIEVVKTLVE-----KADVNIKDADRWTPLHVAAANGHEDVVTILTGKGA 197
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
++AK ++G TPLHL+ + V+TL+ + +A+D++ TPL HL+
Sbjct: 198 IVDAKNSDGWTPLHLAAANGHKD----VVETLIANKVNVNAEDDDRCTPL-HLAAEANHI 252
Query: 170 KLRELLL 176
++ ++L+
Sbjct: 253 EVVKILV 259
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 50 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGA 109
TPLH++A Y EIV+ L + G + ++A++ G TPLH+A N + + L+A+
Sbjct: 76 TPLHLAAHYGHKEIVQVLSKAEG---INVDAKDSDGWTPLHLATANSHKDVVETLIANKV 132
Query: 110 FIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSA 169
+ A+ ++ TPLHL+ + VKTL+E AD + KD + TPL H++ G
Sbjct: 133 NVNAEDDDRCTPLHLAA----EANHIEVVKTLVE-KADVNIKDADRWTPL-HVAAANGHE 186
Query: 170 KLRELL 175
+ +L
Sbjct: 187 DVVTIL 192
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 52 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLL-AHGAF 110
LH ++ +N A + K+L+E + ++ A++ TPLH+AA G E ++L A G
Sbjct: 45 LHFASYWNCANVAKALIE----NGADINAEHDNKITPLHLAAHYGHKEIVQVLSKAEGIN 100
Query: 111 IEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLS 163
++AK ++G TPLHL+ S + V+TL+ + +A+D++ TPL HL+
Sbjct: 101 VDAKDSDGWTPLHLATANSHKD----VVETLIANKVNVNAEDDDRCTPL-HLA 148
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 81 QNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKT 140
QN LH A+ C AK L+ +GA I A+ +N +TPLHL+ Y E +
Sbjct: 37 QNSQEVKLLHFASYWNCANVAKALIENGADINAEHDNKITPLHLAAHYG-HKEIVQVLSK 95
Query: 141 LLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 176
N D AKD++G TPL HL+ + E L+
Sbjct: 96 AEGINVD--AKDSDGWTPL-HLATANSHKDVVETLI 128
>gi|308232597|ref|ZP_07416569.2| hypothetical protein TMAG_00615 [Mycobacterium tuberculosis
SUMu001]
gi|308371486|ref|ZP_07425111.2| hypothetical protein TMCG_01378 [Mycobacterium tuberculosis
SUMu003]
gi|308371531|ref|ZP_07425240.2| hypothetical protein TMDG_01826 [Mycobacterium tuberculosis
SUMu004]
gi|308372769|ref|ZP_07429773.2| hypothetical protein TMEG_00367 [Mycobacterium tuberculosis
SUMu005]
gi|308373853|ref|ZP_07433840.2| hypothetical protein TMFG_02105 [Mycobacterium tuberculosis
SUMu006]
gi|308375016|ref|ZP_07442388.2| hypothetical protein TMGG_01414 [Mycobacterium tuberculosis
SUMu007]
gi|308378501|ref|ZP_07482776.2| hypothetical protein TMIG_00224 [Mycobacterium tuberculosis
SUMu009]
gi|308379651|ref|ZP_07487011.2| hypothetical protein TMJG_01124 [Mycobacterium tuberculosis
SUMu010]
gi|308380845|ref|ZP_07491226.2| hypothetical protein TMKG_01118 [Mycobacterium tuberculosis
SUMu011]
gi|308213388|gb|EFO72787.1| hypothetical protein TMAG_00615 [Mycobacterium tuberculosis
SUMu001]
gi|308328641|gb|EFP17492.1| hypothetical protein TMCG_01378 [Mycobacterium tuberculosis
SUMu003]
gi|308336386|gb|EFP25237.1| hypothetical protein TMDG_01826 [Mycobacterium tuberculosis
SUMu004]
gi|308339983|gb|EFP28834.1| hypothetical protein TMEG_00367 [Mycobacterium tuberculosis
SUMu005]
gi|308343981|gb|EFP32832.1| hypothetical protein TMFG_02105 [Mycobacterium tuberculosis
SUMu006]
gi|308347766|gb|EFP36617.1| hypothetical protein TMGG_01414 [Mycobacterium tuberculosis
SUMu007]
gi|308352390|gb|EFP41241.1| hypothetical protein TMIG_00224 [Mycobacterium tuberculosis
SUMu009]
gi|308356340|gb|EFP45191.1| hypothetical protein TMJG_01124 [Mycobacterium tuberculosis
SUMu010]
gi|308360296|gb|EFP49147.1| hypothetical protein TMKG_01118 [Mycobacterium tuberculosis
SUMu011]
Length = 583
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 200 ELENELSNIVGLHELKIQLRKWAKGMLLDERRKALGLKVGARRPPHMAFLGNPGTGKTMV 259
E + EL +GL +K Q+ ++ L+ R A G+KV A+ HM F G PGTGKT +
Sbjct: 295 EAQAELDRQIGLTRVKNQIERYRAATLMARVRAAKGMKV-AQPSKHMIFTGPPGTGKTTI 353
Query: 260 ARILGRLLYMVGILPTDRVTEVQRTDLVGEFVGHTGPKTRRRVGHLL 306
AR++ +L +G++ ++ E R D V E+ G + KT + + L
Sbjct: 354 ARVVANILAGLGVIAEPKLVETSRKDFVAEYEGQSAVKTAKTIDQAL 400
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,032,168,442
Number of Sequences: 23463169
Number of extensions: 207769954
Number of successful extensions: 923150
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11016
Number of HSP's successfully gapped in prelim test: 18219
Number of HSP's that attempted gapping in prelim test: 748397
Number of HSP's gapped (non-prelim): 114325
length of query: 316
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 174
effective length of database: 9,027,425,369
effective search space: 1570772014206
effective search space used: 1570772014206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)