Query 021198
Match_columns 316
No_of_seqs 152 out of 799
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 14:11:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1z0n_A 5'-AMP-activated protei 99.9 2E-23 6.8E-28 166.4 9.6 82 221-316 7-89 (96)
2 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.7E-23 9.4E-28 192.6 10.2 114 192-316 128-253 (294)
3 2qlv_B Protein SIP2, protein S 99.9 7.6E-23 2.6E-27 188.5 11.0 84 223-316 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 4.4E-15 1.5E-19 150.5 7.5 79 222-313 15-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 8.3E-12 2.9E-16 125.0 8.1 68 224-304 16-84 (645)
6 2z0b_A GDE5, KIAA1434, putativ 98.4 7.9E-07 2.7E-11 74.2 7.8 70 223-300 7-101 (131)
7 3c8d_A Enterochelin esterase; 98.3 1E-06 3.6E-11 83.3 8.2 81 222-315 28-149 (403)
8 1ac0_A Glucoamylase; hydrolase 97.9 5.4E-06 1.9E-10 66.1 3.8 75 223-305 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.7 0.00013 4.3E-09 73.4 9.4 68 225-304 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.5 0.00016 5.5E-09 75.0 7.8 69 224-304 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.3 0.00029 1E-08 73.2 7.4 66 225-303 65-144 (755)
12 1bf2_A Isoamylase; hydrolase, 96.3 0.0035 1.2E-07 64.7 5.6 55 226-293 17-84 (750)
13 2wsk_A Glycogen debranching en 96.1 0.0072 2.5E-07 61.3 6.6 55 225-293 19-77 (657)
14 2laa_A Beta/alpha-amylase; SBD 96.1 0.013 4.3E-07 47.9 6.8 66 225-302 5-77 (104)
15 3vgf_A Malto-oligosyltrehalose 96.1 0.003 1E-07 62.7 3.6 61 226-302 10-73 (558)
16 1qho_A Alpha-amylase; glycosid 96.1 0.015 5.2E-07 58.9 8.6 71 223-305 580-673 (686)
17 1cyg_A Cyclodextrin glucanotra 95.9 0.028 9.5E-07 56.9 9.7 74 223-305 578-667 (680)
18 2vr5_A Glycogen operon protein 95.9 0.012 4E-07 60.6 6.8 55 226-294 30-91 (718)
19 2bhu_A Maltooligosyltrehalose 95.8 0.01 3.5E-07 59.7 5.8 62 226-304 35-97 (602)
20 2vn4_A Glucoamylase; hydrolase 95.7 0.022 7.5E-07 57.9 8.1 73 225-305 497-583 (599)
21 3bmv_A Cyclomaltodextrin gluca 95.6 0.024 8.3E-07 57.4 7.8 73 224-305 583-670 (683)
22 1d3c_A Cyclodextrin glycosyltr 95.4 0.033 1.1E-06 56.4 7.8 73 223-304 585-672 (686)
23 2e8y_A AMYX protein, pullulana 95.0 0.033 1.1E-06 57.0 6.6 66 226-304 114-186 (718)
24 4aio_A Limit dextrinase; hydro 94.9 0.039 1.3E-06 56.0 6.9 66 225-303 136-215 (884)
25 1wzl_A Alpha-amylase II; pullu 94.9 0.033 1.1E-06 55.3 6.0 59 225-291 23-87 (585)
26 2fhf_A Pullulanase; multiple d 94.7 0.035 1.2E-06 60.2 6.1 68 225-304 304-385 (1083)
27 1vem_A Beta-amylase; beta-alph 94.5 0.051 1.8E-06 54.3 6.3 70 224-304 419-505 (516)
28 1j0h_A Neopullulanase; beta-al 93.8 0.047 1.6E-06 54.2 4.6 61 223-291 21-89 (588)
29 2wan_A Pullulanase; hydrolase, 93.3 0.1 3.4E-06 55.4 6.3 64 225-302 325-398 (921)
30 3m07_A Putative alpha amylase; 93.0 0.18 6.2E-06 51.0 7.4 62 226-304 43-107 (618)
31 2ya0_A Putative alkaline amylo 92.9 0.14 4.6E-06 52.4 6.3 66 226-303 25-106 (714)
32 3faw_A Reticulocyte binding pr 92.7 0.08 2.7E-06 56.2 4.5 65 227-303 146-224 (877)
33 1gcy_A Glucan 1,4-alpha-maltot 92.3 0.025 8.5E-07 55.4 0.0 69 224-303 430-516 (527)
34 2wan_A Pullulanase; hydrolase, 90.5 0.28 9.5E-06 52.0 5.7 61 226-295 154-221 (921)
35 1ea9_C Cyclomaltodextrinase; h 89.6 0.081 2.8E-06 52.5 0.7 60 224-291 22-86 (583)
36 1ji1_A Alpha-amylase I; beta/a 88.7 0.2 6.9E-06 50.2 2.8 60 225-292 30-96 (637)
37 2ya1_A Putative alkaline amylo 88.2 0.47 1.6E-05 50.9 5.4 64 227-302 333-412 (1014)
38 2c3v_A Alpha-amylase G-6; carb 84.4 1.8 6.1E-05 35.1 5.7 65 225-301 10-81 (102)
39 4fch_A Outer membrane protein 83.2 0.75 2.6E-05 40.4 3.3 50 235-295 12-63 (221)
40 3tnu_B Keratin, type II cytosk 63.3 20 0.00068 29.2 6.8 63 157-219 34-96 (129)
41 4fe9_A Outer membrane protein 60.7 7.3 0.00025 37.4 4.3 46 235-291 150-197 (470)
42 4dny_A Metalloprotease STCE; m 57.9 24 0.00083 29.7 6.4 24 276-300 99-123 (126)
43 3tnu_A Keratin, type I cytoske 57.8 18 0.00063 29.6 5.7 61 158-218 37-97 (131)
44 3qh9_A Liprin-beta-2; coiled-c 54.4 32 0.0011 27.1 6.2 40 159-198 26-65 (81)
45 3swk_A Vimentin; cytoskeleton, 49.9 24 0.00083 27.3 4.9 45 160-204 1-45 (86)
46 4fe9_A Outer membrane protein 47.1 14 0.00048 35.4 3.8 54 235-299 260-320 (470)
47 2djm_A Glucoamylase A; beta sa 46.5 43 0.0015 27.0 6.0 59 235-297 33-97 (106)
48 3vkg_A Dynein heavy chain, cyt 46.5 18 0.00061 43.9 5.2 72 161-232 2016-2090(3245)
49 2eef_A Protein phosphatase 1, 46.4 27 0.00092 30.0 5.1 70 226-300 49-131 (156)
50 3ol1_A Vimentin; structural ge 44.8 54 0.0019 26.5 6.5 45 158-202 19-63 (119)
51 4fem_A Outer membrane protein 40.6 18 0.00062 33.5 3.3 51 235-296 149-201 (358)
52 1mhx_A Immunoglobulin-binding 35.6 12 0.00041 28.0 1.0 14 290-303 48-61 (65)
53 2b5u_A Colicin E3; high resolu 34.9 37 0.0013 34.7 4.7 71 145-222 296-366 (551)
54 4fch_A Outer membrane protein 33.3 24 0.00083 30.6 2.8 49 236-294 117-169 (221)
55 1x8y_A Lamin A/C; structural p 32.7 71 0.0024 24.5 5.1 67 143-210 13-82 (86)
56 1igd_A Protein G; immunoglobul 30.4 17 0.00058 27.2 1.1 13 290-302 44-56 (61)
57 3fil_A Immunoglobulin G-bindin 29.1 12 0.00042 27.4 0.1 13 290-302 39-51 (56)
58 4ani_A Protein GRPE; chaperone 28.8 1.3E+02 0.0046 26.9 6.9 64 159-222 59-127 (213)
59 3fpp_A Macrolide-specific effl 28.6 1.2E+02 0.004 27.1 6.5 41 142-182 59-99 (341)
60 3oja_A Leucine-rich immune mol 28.3 1.1E+02 0.0038 28.9 6.6 54 166-219 421-477 (487)
61 4abm_A Charged multivesicular 27.6 89 0.003 23.9 4.8 34 174-207 7-40 (79)
62 1bxv_A Plastocyanin; copper pr 26.5 62 0.0021 23.1 3.6 12 277-288 54-66 (91)
63 4dzn_A Coiled-coil peptide CC- 25.1 1E+02 0.0036 20.1 4.0 20 174-193 10-29 (33)
64 2xv5_A Lamin-A/C; structural p 24.1 2.3E+02 0.008 21.3 6.6 56 159-214 5-63 (74)
65 3na7_A HP0958; flagellar bioge 24.1 1.7E+02 0.0058 26.0 6.7 27 160-186 98-124 (256)
66 2rpv_A Immunoglobulin G-bindin 24.0 25 0.00086 27.1 1.0 13 290-302 58-70 (75)
67 3n27_A Fusion glycoprotein F0, 23.9 1E+02 0.0035 24.2 4.5 67 156-222 3-77 (80)
68 4dk0_A Putative MACA; alpha-ha 23.7 1.1E+02 0.0039 27.4 5.5 11 212-222 143-153 (369)
69 3mxz_A Tubulin-specific chaper 23.4 1.8E+02 0.0061 23.8 6.2 61 162-222 36-105 (116)
70 2jo8_A Serine/threonine-protei 23.1 69 0.0024 23.2 3.1 32 187-218 17-49 (51)
71 2r9f_A Calpain-1 catalytic sub 23.0 49 0.0017 31.0 3.1 25 280-304 120-147 (339)
72 1gk4_A Vimentin; intermediate 22.9 2E+02 0.0068 21.7 6.0 62 150-212 18-82 (84)
73 3nmd_A CGMP dependent protein 22.9 66 0.0023 24.7 3.2 39 147-187 30-68 (72)
74 3bwu_D FIMD, outer membrane us 22.5 58 0.002 25.8 3.0 18 279-296 28-45 (125)
75 4emc_A Monopolin complex subun 22.4 1.8E+02 0.0062 26.0 6.4 36 160-195 28-63 (190)
76 4gln_D D-RFX001; heterochiral 21.1 31 0.0011 25.4 1.0 16 287-302 35-51 (56)
77 1nkp_B MAX protein, MYC proto- 21.1 96 0.0033 23.1 3.8 33 161-193 49-81 (83)
78 1svf_A Protein (fusion glycopr 21.0 2.6E+02 0.0089 20.8 6.1 49 156-204 11-59 (64)
79 4b6x_A AVRRPS4, avirulence pro 21.0 1E+02 0.0035 24.5 4.0 69 114-183 9-79 (90)
80 1pgx_A Protein G; immunoglobul 20.9 26 0.00088 27.5 0.6 14 290-303 52-65 (83)
81 3oja_B Anopheles plasmodium-re 20.5 1.2E+02 0.004 29.3 5.2 6 176-181 526-531 (597)
No 1
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.89 E-value=2e-23 Score=166.37 Aligned_cols=82 Identities=34% Similarity=0.585 Sum_probs=73.6
Q ss_pred CCCCeEEEEEEecCCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEeeeCCCC
Q 021198 221 LSGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQR 300 (316)
Q Consensus 221 LsgLk~VTFtW~g~AkeV~VtGSFNnW~~~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~DP~~ 300 (316)
-...++|+|+|.+.|++|+|+|+||+|+ .++|.+ ..|.|++++.|+||.|+|||+|||.|++||.+
T Consensus 7 ~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~-------------~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~ 72 (96)
T 1z0n_A 7 PAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTR-------------SQNNFVAILDLPEGEHQYKFFVDGQWTHDPSE 72 (96)
T ss_dssp ---CEEEEEEECSCCSCEEEEEGGGTTC-CEECEE-------------ETTEEEEEEEECSEEEEEEEEETTEEECCTTS
T ss_pred CCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEE-------------CCCEEEEEEEccCCCEEEEEEECCeEEcCCCC
Confidence 3456899999998899999999999999 789986 25899999999999999999999999999999
Q ss_pred CeecC-CCccceEEEeC
Q 021198 301 ESVTK-GGICNNILRVI 316 (316)
Q Consensus 301 PtVtD-~GnvNNVLeVe 316 (316)
|++.+ .|+.||+|.|.
T Consensus 73 ~~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 73 PIVTSQLGTVNNIIQVK 89 (96)
T ss_dssp CEEECTTSCEEEEEEEC
T ss_pred CeEECCCCCEeEEEEEc
Confidence 99987 89999999984
No 2
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.89 E-value=2.7e-23 Score=192.58 Aligned_cols=114 Identities=24% Similarity=0.374 Sum_probs=91.3
Q ss_pred HhHHhhhhhhhhhhhcccchH------HHHHHhhh-CC--CCeEEEEEEec-CCcEEEEEeeeCCCccccccCCCCCCCc
Q 021198 192 LQTKAVTEINKAEKLISDKDE------ELIAAEES-LS--GLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSI 261 (316)
Q Consensus 192 lq~kae~~i~ea~~li~eK~~------~L~aae~a-Ls--gLk~VTFtW~g-~AkeV~VtGSFNnW~~~IpL~K~~~~s~ 261 (316)
|-.+.-..+.+|-..+.++|+ .+..+... |. ..++|+|+|++ +|++|+|+|||++|...++|.++
T Consensus 128 Lm~~~g~s~~~A~~~v~~~Rp~~Pn~~~l~~~~~~~L~~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~----- 202 (294)
T 3nme_A 128 MFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG----- 202 (294)
T ss_dssp HHHTSCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC-----
T ss_pred HHHHhCCCHHHHHHHHHHhCCCCCChhhhhHHHHHhhhccccccceeeeccCCCCEEEEEEeccCCCCcccceEc-----
Confidence 333334467777777777763 22222222 22 44899999999 59999999999999988999885
Q ss_pred cccccccCCCcEEEEEEeCCeeEEEEEEECCEeeeCCCCCee-cC-CCccceEEEeC
Q 021198 262 IEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV-TK-GGICNNILRVI 316 (316)
Q Consensus 262 ~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~DP~~PtV-tD-~GnvNNVLeVe 316 (316)
...|.|++++.||||.|+|||+|||+|++||++|.+ .+ .|+.||||.|.
T Consensus 203 ------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 203 ------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp ------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEEC
T ss_pred ------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEEC
Confidence 247999999999999999999999999999999987 56 89999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.88 E-value=7.6e-23 Score=188.53 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.2
Q ss_pred CCeEEEEEEecCCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEeeeCCCCCe
Q 021198 223 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 302 (316)
Q Consensus 223 gLk~VTFtW~g~AkeV~VtGSFNnW~~~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~DP~~Pt 302 (316)
.+++|+|+|+++|++|+|+|+|++|.+.++|.|.. .++|.|++++.|+||.|+|||+|||+|++||.+|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 56899999999999999999999999888998731 25799999999999999999999999999999999
Q ss_pred ecC-CCccceEEEeC
Q 021198 303 VTK-GGICNNILRVI 316 (316)
Q Consensus 303 VtD-~GnvNNVLeVe 316 (316)
+.+ .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 987 89999999983
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.54 E-value=4.4e-15 Score=150.50 Aligned_cols=79 Identities=19% Similarity=0.230 Sum_probs=68.0
Q ss_pred CCCeEEEEEEec--CCcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEee--e
Q 021198 222 SGLEVVEIQYSG--DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--V 296 (316)
Q Consensus 222 sgLk~VTFtW~g--~AkeV~VtGSFNnW~~~-IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~--~ 296 (316)
.+..+|+|+++. +|++|+|+||||+|++. .+|.+ .+|.|++++.||||.|+|||+|||+|. +
T Consensus 15 ~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~ 81 (696)
T 4aee_A 15 KGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVL 81 (696)
T ss_dssp EEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCC
T ss_pred CCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecC
Confidence 355789999987 59999999999999764 57765 489999999999999999999999999 8
Q ss_pred CCCCCeec---C-CCccceEE
Q 021198 297 DPQRESVT---K-GGICNNIL 313 (316)
Q Consensus 297 DP~~PtVt---D-~GnvNNVL 313 (316)
||++|... + +|..|+|.
T Consensus 82 d~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 82 DPDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp CTTCCCEEEEECSSCTTSEEE
T ss_pred CCCCCcccccccCCcccccee
Confidence 89988754 3 68899985
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.25 E-value=8.3e-12 Score=125.03 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=60.1
Q ss_pred CeEEEEEEecCCcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEeeeCCCCCe
Q 021198 224 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 302 (316)
Q Consensus 224 Lk~VTFtW~g~AkeV~VtGSFNnW~~~-IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~DP~~Pt 302 (316)
...|.|.++..|+.|+|+|+||+|.+. .+|++ ..+.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 357888999999999999999999874 56764 4789999999999999999999999999999997
Q ss_pred ec
Q 021198 303 VT 304 (316)
Q Consensus 303 Vt 304 (316)
..
T Consensus 83 ~~ 84 (645)
T 4aef_A 83 RR 84 (645)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 6
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.38 E-value=7.9e-07 Score=74.17 Aligned_cols=70 Identities=24% Similarity=0.579 Sum_probs=53.5
Q ss_pred CCeEEEEEEecC---CcEEEEEee---eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE---
Q 021198 223 GLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV--- 290 (316)
Q Consensus 223 gLk~VTFtW~g~---AkeV~VtGS---FNnW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV--- 290 (316)
....|+|..... ++.|+|+|+ +.+|++. ++|.... .+.....|++++.||+| .+||||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~--------~~~~~~~W~~~v~lp~~~~~eYKyvi~~~ 78 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEN--------DTGESMLWKATIVLSRGVSVQYRYFKGYF 78 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECC--------TTCCSSEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccc--------cCCCCCeEEEEEEcCCCCcEEEEEEEEee
Confidence 457899988763 899999999 8999974 5786531 01257899999999998 69999999
Q ss_pred -----C-C-------EeeeCCCC
Q 021198 291 -----D-G-------QWKVDPQR 300 (316)
Q Consensus 291 -----D-G-------eW~~DP~~ 300 (316)
+ | .|...+.+
T Consensus 79 ~~~~~~~g~~~v~~~~WE~g~~N 101 (131)
T 2z0b_A 79 LEPKTIGGPCQVIVHKWETHLQP 101 (131)
T ss_dssp ECCCC----CEEEEEEECCSSCC
T ss_pred cCccccCCccccceeeECCCCCC
Confidence 5 3 68887733
No 7
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.33 E-value=1e-06 Score=83.33 Aligned_cols=81 Identities=21% Similarity=0.213 Sum_probs=63.8
Q ss_pred CCCeEEEEEEecC-C-------cEEEEEeeeCCCccc------cccCCCCCCCccccccccCCCcEEEEEEeCCeeE-EE
Q 021198 222 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHHR------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 286 (316)
Q Consensus 222 sgLk~VTFtW~g~-A-------keV~VtGSFNnW~~~------IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrY-EY 286 (316)
.+.+.|||.|.++ | +.|+|. +++|... .+|+|. .+.|+|+.++.|++|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 3457999999987 5 789998 3444332 357763 36899999999999999 99
Q ss_pred EEEEC------------------------CEeeeCCCCCeecC-C-CccceEEEe
Q 021198 287 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 315 (316)
Q Consensus 287 KFIVD------------------------GeW~~DP~~PtVtD-~-GnvNNVLeV 315 (316)
.|+|| |..+.||.+|.... . |...|+++|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 78899999998764 4 777888876
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.94 E-value=5.4e-06 Score=66.11 Aligned_cols=75 Identities=27% Similarity=0.509 Sum_probs=55.6
Q ss_pred CCeEEEEEEecC---CcEEEEEeee---CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEEC--
Q 021198 223 GLEVVEIQYSGD---GEIVEVAGSF---NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVD-- 291 (316)
Q Consensus 223 gLk~VTFtW~g~---AkeV~VtGSF---NnW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIVD-- 291 (316)
+...|+|..... |+.|+|+|+. .+|++. ++|.... .+.+.+.|++++.||+| .+||||+|.
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 456788888763 8999999986 589974 5787531 01146899999999998 599999993
Q ss_pred -C--EeeeCCCCCeecC
Q 021198 292 -G--QWKVDPQRESVTK 305 (316)
Q Consensus 292 -G--eW~~DP~~PtVtD 305 (316)
| .|..+|+.-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 4 4888887665444
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.66 E-value=0.00013 Score=73.36 Aligned_cols=68 Identities=24% Similarity=0.371 Sum_probs=52.4
Q ss_pred eEEEEEEec-CCcEEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE---CCEe--ee
Q 021198 225 EVVEIQYSG-DGEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--KV 296 (316)
Q Consensus 225 k~VTFtW~g-~AkeV~VtGSFNnW~~-~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIV---DGeW--~~ 296 (316)
..|+|+..+ .|+.|.|.|+|++|.. .++|.+. ...|+|++.+. +.+|.+ |+|.| ||.+ ..
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~ 92 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKS 92 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEec
Confidence 578996554 5999999999999975 3688763 25799999998 788874 99999 6764 67
Q ss_pred CCCCCeec
Q 021198 297 DPQRESVT 304 (316)
Q Consensus 297 DP~~PtVt 304 (316)
||-...+.
T Consensus 93 DPya~~~~ 100 (617)
T 1m7x_A 93 DPYAFEAQ 100 (617)
T ss_dssp CTTCSSEE
T ss_pred Cccceeec
Confidence 87665543
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.50 E-value=0.00016 Score=75.01 Aligned_cols=69 Identities=26% Similarity=0.357 Sum_probs=52.2
Q ss_pred CeEEEEEEec-CCcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE---CCEe--e
Q 021198 224 LEVVEIQYSG-DGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 295 (316)
Q Consensus 224 Lk~VTFtW~g-~AkeV~VtGSFNnW~~~-IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIV---DGeW--~ 295 (316)
..-|+|+..+ .|+.|.|.|+||+|... .+|.+. ...|+|++.+. +.+|. .|||.| ||.| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 3568996555 59999999999999864 678753 24699999997 88884 588888 5654 6
Q ss_pred eCCCCCeec
Q 021198 296 VDPQRESVT 304 (316)
Q Consensus 296 ~DP~~PtVt 304 (316)
.||-...+.
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 788776554
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.34 E-value=0.00029 Score=73.17 Aligned_cols=66 Identities=20% Similarity=0.416 Sum_probs=49.5
Q ss_pred eEEEEE-EecCCcEEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEE-------eCCeeEEEEEEEC---C
Q 021198 225 EVVEIQ-YSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---G 292 (316)
Q Consensus 225 k~VTFt-W~g~AkeV~VtGSFNnW~~~-IpL~K~~~~s~~~~~~~k~~GvwsltL~-------LpPGrYEYKFIVD---G 292 (316)
..|+|+ |...|+.|.|.|+|++|... ++|.+. ..|+|++.+. +++|.+ |||.|+ |
T Consensus 65 ~gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g 131 (755)
T 3aml_A 65 GATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGG 131 (755)
T ss_dssp TEEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTC
T ss_pred CeEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCC
Confidence 368895 55559999999999999764 688753 5799999998 678865 888886 4
Q ss_pred Ee--eeCCCCCee
Q 021198 293 QW--KVDPQRESV 303 (316)
Q Consensus 293 eW--~~DP~~PtV 303 (316)
.| +.||-...+
T Consensus 132 ~~~~~~dpya~~~ 144 (755)
T 3aml_A 132 AWVDRIPAWIRYA 144 (755)
T ss_dssp CCEEECCTTCSCE
T ss_pred cEEecCCcchheE
Confidence 55 347755443
No 12
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=96.33 E-value=0.0035 Score=64.66 Aligned_cols=55 Identities=9% Similarity=0.120 Sum_probs=43.2
Q ss_pred EEEEEEe-cCCcEEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCcEEEEEE-eC------CeeEEEEEEECC
Q 021198 226 VVEIQYS-GDGEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 292 (316)
Q Consensus 226 ~VTFtW~-g~AkeV~VtGSFNnW~~-----~IpL~K~~~~s~~~~~~~k~~GvwsltL~-Lp------PGrYEYKFIVDG 292 (316)
.|+|+.. ..|+.|.|.+ |+.|.. .++|.+. ..|+|++.+. +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 3889654 4599999998 987653 3567652 5699999997 67 999999999997
Q ss_pred E
Q 021198 293 Q 293 (316)
Q Consensus 293 e 293 (316)
.
T Consensus 84 ~ 84 (750)
T 1bf2_A 84 P 84 (750)
T ss_dssp T
T ss_pred e
Confidence 5
No 13
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=96.13 E-value=0.0072 Score=61.29 Aligned_cols=55 Identities=24% Similarity=0.358 Sum_probs=43.2
Q ss_pred eEEEEEEe-cCCcEEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECCE
Q 021198 225 EVVEIQYS-GDGEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 293 (316)
Q Consensus 225 k~VTFtW~-g~AkeV~VtGSFNnW~--~~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVDGe 293 (316)
..|+|+.. ..|+.|.|.+ |+.+. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.
T Consensus 19 ~g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~------------~~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 19 QGVNFTLFSAHAERVELCV-FDANGQEHRYDLPG------------HSGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp SEEEEEEECSSCSEEEEEE-ECTTCCEEEEECCE------------EETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred CeEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcC------------CCCCEEEEEECCCCCCCE-EEEEEeee
Confidence 36889654 4599999999 98765 3578875 25799999986 888987 99999983
No 14
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.13 E-value=0.013 Score=47.85 Aligned_cols=66 Identities=18% Similarity=0.227 Sum_probs=50.6
Q ss_pred eEEEEEEecCCcEEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEECCE--eeeC
Q 021198 225 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WKVD 297 (316)
Q Consensus 225 k~VTFtW~g~AkeV~VtGSFN--nW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIVDGe--W~~D 297 (316)
..|||.|..+.++|+|...+. +|... ++|.+. .-.+.+..++.|+.| .++|+|. ||. |-.+
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-----------~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn 72 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-----------EISGYAKITVDIGSASQLEAAFN-DGNNNWDSN 72 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-----------TTTTEEEEEEECTTCSCEEEEEE-CSSSCEEST
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-----------cCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCC
Confidence 578999998899999999985 89874 578652 013433699999976 8999995 864 9988
Q ss_pred CCCCe
Q 021198 298 PQRES 302 (316)
Q Consensus 298 P~~Pt 302 (316)
+..-.
T Consensus 73 ~g~Ny 77 (104)
T 2laa_A 73 NTKNY 77 (104)
T ss_dssp TTSCE
T ss_pred CCccE
Confidence 77654
No 15
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.10 E-value=0.003 Score=62.66 Aligned_cols=61 Identities=13% Similarity=0.062 Sum_probs=49.5
Q ss_pred EEEEEEec-CCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECCE-eeeCCCCCe
Q 021198 226 VVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 302 (316)
Q Consensus 226 ~VTFtW~g-~AkeV~VtGSFNnW~~~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVDGe-W~~DP~~Pt 302 (316)
.|+|+..+ .|+.|.|.|.|+ ..++|.+. ..|+|++.+. +.+|. .|+|.|||. ...||-...
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 67886555 599999999987 56789863 5799999997 88885 699999986 888987654
No 16
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.07 E-value=0.015 Score=58.91 Aligned_cols=71 Identities=21% Similarity=0.382 Sum_probs=52.8
Q ss_pred CCeEEEEEEec-----CCcEEEEEeeeC---CCcc--------cc-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eE
Q 021198 223 GLEVVEIQYSG-----DGEIVEVAGSFN---GWHH--------RI-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TY 284 (316)
Q Consensus 223 gLk~VTFtW~g-----~AkeV~VtGSFN---nW~~--------~I-pL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rY 284 (316)
..+.|+|.... .|+.|+|+|+.. +|++ .+ +|.. .....|++++.||+| .+
T Consensus 580 ~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~------------~~~~~W~~~v~l~~~~~~ 647 (686)
T 1qho_A 580 TQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA------------PNYPDWFYVFSVPAGKTI 647 (686)
T ss_dssp SEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC------------TTTTSEEEEEEEETTCEE
T ss_pred CeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc------------CCCCcEEEEEEeCCCCeE
Confidence 34678887764 478999999884 8987 23 4442 256789999999998 69
Q ss_pred EEEEEE---CC--EeeeCCCCCeecC
Q 021198 285 EIKFIV---DG--QWKVDPQRESVTK 305 (316)
Q Consensus 285 EYKFIV---DG--eW~~DP~~PtVtD 305 (316)
||||+| +| .|...|+.-....
T Consensus 648 eyKy~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 648 QFKFFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEEEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEEEEcCCCCEEeCCCCCeeEECC
Confidence 999998 34 4888777655444
No 17
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.91 E-value=0.028 Score=56.92 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=54.4
Q ss_pred CCeEEEEEEec----CCcEEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 021198 223 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 290 (316)
Q Consensus 223 gLk~VTFtW~g----~AkeV~VtGSFN---nW~~~--I-pL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV- 290 (316)
+.+.|+|+... .++.|+|+|+-. +|++. + +|.... ......|++++.||+| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV---------VYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35788998865 389999999875 99875 4 565421 1256799999999988 89999997
Q ss_pred --CC--EeeeCCCCCeecC
Q 021198 291 --DG--QWKVDPQRESVTK 305 (316)
Q Consensus 291 --DG--eW~~DP~~PtVtD 305 (316)
+| .|...++.-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 34 4887776655444
No 18
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.87 E-value=0.012 Score=60.55 Aligned_cols=55 Identities=20% Similarity=0.337 Sum_probs=42.5
Q ss_pred EEEEEEe-cCCcEEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECCEe
Q 021198 226 VVEIQYS-GDGEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 294 (316)
Q Consensus 226 ~VTFtW~-g~AkeV~VtGSFNnW~-----~~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVDGeW 294 (316)
.|+|+.. ..|+.|.|.+ |+.+. ..++|.+ ...|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~------------~~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKN------------KTGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECE------------ESSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCcc------------CCCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 6889654 4599999999 87544 2467865 25799999997 889987 999999854
No 19
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.76 E-value=0.01 Score=59.69 Aligned_cols=62 Identities=19% Similarity=0.218 Sum_probs=48.5
Q ss_pred EEEEEE-ecCCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEeeeCCCCCeec
Q 021198 226 VVEIQY-SGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT 304 (316)
Q Consensus 226 ~VTFtW-~g~AkeV~VtGSFNnW~~~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~DP~~PtVt 304 (316)
.|+|+. ...|+.|.|.|. + ..++|.+. ..|+|++.+.+.+|.+ |+|.|||....||-.....
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 688854 455999999994 2 35788763 5799999999888986 9999999777888766543
No 20
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.73 E-value=0.022 Score=57.87 Aligned_cols=73 Identities=27% Similarity=0.519 Sum_probs=52.6
Q ss_pred eEEEEEEecC---CcEEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE---CC
Q 021198 225 EVVEIQYSGD---GEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV---DG 292 (316)
Q Consensus 225 k~VTFtW~g~---AkeV~VtGSFN---nW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV---DG 292 (316)
+.|+|..... |+.|+|+|+-. +|++. ++|.... .+.....|++++.||+| .+||||+| +|
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 5688887653 89999999874 89874 6786531 01124789999999998 69999998 23
Q ss_pred --EeeeCCCCCeecC
Q 021198 293 --QWKVDPQRESVTK 305 (316)
Q Consensus 293 --eW~~DP~~PtVtD 305 (316)
.|...|+.-....
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 3777776654443
No 21
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.59 E-value=0.024 Score=57.36 Aligned_cols=73 Identities=22% Similarity=0.325 Sum_probs=52.6
Q ss_pred CeEEEEEEec----CCcEEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-C
Q 021198 224 LEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D 291 (316)
Q Consensus 224 Lk~VTFtW~g----~AkeV~VtGSFN---nW~~~--I-pL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV-D 291 (316)
.+.|+|+... .++.|+|+|+-. +|++. + +|.... +.....|++++.||+| .+||||++ |
T Consensus 583 ~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~~ 653 (683)
T 3bmv_A 583 QICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV---------VYQYPTWYYDVSVPAGTTIQFKFIKKN 653 (683)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS---------SSCTTSEEEEEEEETTCEEEEEEEEES
T ss_pred eEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC---------CCCCCcEEEEEEeCCCCcEEEEEEEEc
Confidence 4688998865 389999999885 99874 5 665421 1256799999999988 89999997 3
Q ss_pred C---EeeeCCCCCeecC
Q 021198 292 G---QWKVDPQRESVTK 305 (316)
Q Consensus 292 G---eW~~DP~~PtVtD 305 (316)
+ .|...++.-....
T Consensus 654 ~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 654 GNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSCCEECCSSCEEEECC
T ss_pred CCceEecCCCCeeEECC
Confidence 1 4666665544433
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.36 E-value=0.033 Score=56.45 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=51.9
Q ss_pred CCeEEEEEEec----CCcEEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 021198 223 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 290 (316)
Q Consensus 223 gLk~VTFtW~g----~AkeV~VtGSFN---nW~~~--I-pL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV- 290 (316)
..+.|+|+... .|+.|+|+|+-. +|++. + +|.... +.....|++++.||+| .+||||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQV---------VYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 34688998865 389999999875 99874 4 565311 1256799999999988 89999997
Q ss_pred C-C--EeeeCCCCCeec
Q 021198 291 D-G--QWKVDPQRESVT 304 (316)
Q Consensus 291 D-G--eW~~DP~~PtVt 304 (316)
| + .|...++.-...
T Consensus 656 ~~~~~~WE~g~Nr~~~~ 672 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTA 672 (686)
T ss_dssp ETTEEEECCSSCEEEEC
T ss_pred cCCceEecCCCCeEEEC
Confidence 2 2 366665554433
No 23
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=94.98 E-value=0.033 Score=56.98 Aligned_cols=66 Identities=20% Similarity=0.252 Sum_probs=47.9
Q ss_pred EEEEEEec-CCcEEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEC--CEe--eeCC
Q 021198 226 VVEIQYSG-DGEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD--GQW--KVDP 298 (316)
Q Consensus 226 ~VTFtW~g-~AkeV~VtGSFNnW~~-~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVD--GeW--~~DP 298 (316)
.|+|+..+ .|+.|.|.+.|++|.. .++|.+. ..|+|++.+. +.+| +.|+|.|+ |.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g-~~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHG-YEYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTT-CEEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCC-CeEEEEEEeCCeEEEecCC
Confidence 68896554 5999999999998864 3788763 4699999997 5666 34666664 764 5688
Q ss_pred CCCeec
Q 021198 299 QRESVT 304 (316)
Q Consensus 299 ~~PtVt 304 (316)
-...+.
T Consensus 181 ya~~~~ 186 (718)
T 2e8y_A 181 YAKAVT 186 (718)
T ss_dssp TCSSBC
T ss_pred cccccc
Confidence 766543
No 24
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=94.92 E-value=0.039 Score=56.00 Aligned_cols=66 Identities=17% Similarity=0.099 Sum_probs=44.6
Q ss_pred eEEEEEE-ecCCcEEEEEeeeCCCcccc--ccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECC--------
Q 021198 225 EVVEIQY-SGDGEIVEVAGSFNGWHHRI--KMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDG-------- 292 (316)
Q Consensus 225 k~VTFtW-~g~AkeV~VtGSFNnW~~~I--pL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVDG-------- 292 (316)
.-|+|+. ...|+.|.|.+-++.|.... .|.+ ...|+|++.+. +.+|.| |+|.|+|
T Consensus 136 ~g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~------------~~~g~W~~~~~~~~~g~~-Y~y~v~~~~~~~~~~ 202 (884)
T 4aio_A 136 DSVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK------------ESNGVWSVTGPREWENRY-YLYEVDVYHPTKAQV 202 (884)
T ss_dssp SEEEEEEECTTCSEEEEEEESTTTSCEEEEEECE------------EETTEEEEEEEGGGTTCE-EEEEEEEEETTTTEE
T ss_pred CEEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec------------CCCCEEEEEECCCCCCCE-EEEEEeCCCCCcccc
Confidence 3589964 55599999999555565432 2322 35899999997 677754 8888875
Q ss_pred --EeeeCCCCCee
Q 021198 293 --QWKVDPQRESV 303 (316)
Q Consensus 293 --eW~~DP~~PtV 303 (316)
....||-...+
T Consensus 203 ~~~~~~DPya~~~ 215 (884)
T 4aio_A 203 LKCLAGDPYARSL 215 (884)
T ss_dssp EEEEECCTTCSEE
T ss_pred cCccccCCCeeee
Confidence 23467765543
No 25
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=94.87 E-value=0.033 Score=55.32 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=43.0
Q ss_pred eEEEEE-EecCCcEEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 021198 225 EVVEIQ-YSGDGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 291 (316)
Q Consensus 225 k~VTFt-W~g~AkeV~V-tGSFNnW~~----~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVD 291 (316)
..++|+ |.+.++.|.| .|+|++|.. .++|.+... +...|+|++.+......+.|+|.|.
T Consensus 23 ~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 23 LRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGS--------DERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEE--------CSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeec--------CCCEEEEEEEEECCCCeEEEEEEEE
Confidence 455663 4556999999 899999975 468876310 1124679999998777889999885
No 26
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=94.67 E-value=0.035 Score=60.22 Aligned_cols=68 Identities=18% Similarity=0.108 Sum_probs=49.9
Q ss_pred eEEEEEEec-CCcEEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEC------CE-
Q 021198 225 EVVEIQYSG-DGEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ- 293 (316)
Q Consensus 225 k~VTFtW~g-~AkeV~VtG-SFNnW~~-~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVD------Ge- 293 (316)
..|+|+..+ .|+.|.|.+ +|++|.. .++|.+. ...|+|++.+. +.+|.| |+|.|+ |.
T Consensus 304 ~gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~ 371 (1083)
T 2fhf_A 304 SGVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKV 371 (1083)
T ss_dssp TEEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEE
T ss_pred CeEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCcc
Confidence 368896554 599999999 8899975 4688742 25699999986 788865 777775 43
Q ss_pred ---eeeCCCCCeec
Q 021198 294 ---WKVDPQRESVT 304 (316)
Q Consensus 294 ---W~~DP~~PtVt 304 (316)
...||-...+.
T Consensus 372 ~~~~~~DPYa~~~~ 385 (1083)
T 2fhf_A 372 EQYEVTDPYAHSLS 385 (1083)
T ss_dssp EEEEECCTTCSCBC
T ss_pred ccceecCCccceec
Confidence 47788766543
No 27
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=94.45 E-value=0.051 Score=54.31 Aligned_cols=70 Identities=20% Similarity=0.295 Sum_probs=50.3
Q ss_pred CeEEEEEEec----CCcEEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-C
Q 021198 224 LEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D 291 (316)
Q Consensus 224 Lk~VTFtW~g----~AkeV~VtGSFN---nW~~~---IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV-D 291 (316)
.+.|+|.... .|++|+|+|+-. +|++. .+|... ..++.|++++.||+| ..||||+| |
T Consensus 419 ~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~~~ 487 (516)
T 1vem_A 419 PVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFIKS 487 (516)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEEEC
T ss_pred ccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEEEe
Confidence 4789998764 389999999884 89875 245421 134599999999988 59999997 3
Q ss_pred --C---EeeeCCCCCeec
Q 021198 292 --G---QWKVDPQRESVT 304 (316)
Q Consensus 292 --G---eW~~DP~~PtVt 304 (316)
| .|...++.-...
T Consensus 488 ~~g~v~~WE~g~NR~~~~ 505 (516)
T 1vem_A 488 KDGTVKSWQTIQQSWNPV 505 (516)
T ss_dssp TTSCEEEECSSCEEESSC
T ss_pred CCCCeeEEeCCCCEEEec
Confidence 2 477666554333
No 28
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=93.84 E-value=0.047 Score=54.23 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=43.9
Q ss_pred CCeEEEEE-EecCCcEEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 021198 223 GLEVVEIQ-YSGDGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 291 (316)
Q Consensus 223 gLk~VTFt-W~g~AkeV~V-tGSFNnW~~------~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVD 291 (316)
....++|+ |.+.++.|.| .|+|++|.. .++|.+... +...|+|++.+......+.|+|.|.
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 21 ETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGS--------DELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEE--------CSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeec--------CCCeEEEEEEEECCCcEEEEEEEEE
Confidence 34567775 4556999999 799999964 468876310 1124679999988777888999885
No 29
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=93.33 E-value=0.1 Score=55.38 Aligned_cols=64 Identities=16% Similarity=0.253 Sum_probs=45.9
Q ss_pred eEEEEEEecC-CcEEEEEeeeCCCc----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE--CCE--e
Q 021198 225 EVVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--W 294 (316)
Q Consensus 225 k~VTFtW~g~-AkeV~VtGSFNnW~----~~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIV--DGe--W 294 (316)
..|+|+..++ |+.|.|.+ |++|. ..++|.+. ..|+|++.+. +.+|.+ |+|.| +|. +
T Consensus 325 ~gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~ 390 (921)
T 2wan_A 325 DATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQT 390 (921)
T ss_dssp SEEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEE
T ss_pred CeEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEE
Confidence 3688965555 99999997 99994 34788763 4699999997 567743 66666 565 5
Q ss_pred eeCCCCCe
Q 021198 295 KVDPQRES 302 (316)
Q Consensus 295 ~~DP~~Pt 302 (316)
..||-...
T Consensus 391 ~~DPya~~ 398 (921)
T 2wan_A 391 AVDPYARA 398 (921)
T ss_dssp ECCTTCSS
T ss_pred ecCCccee
Confidence 67876654
No 30
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=93.03 E-value=0.18 Score=51.01 Aligned_cols=62 Identities=19% Similarity=0.235 Sum_probs=46.4
Q ss_pred EEEEEEec-CCcEEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEC-CEeeeCCCCCe
Q 021198 226 VVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD-GQWKVDPQRES 302 (316)
Q Consensus 226 ~VTFtW~g-~AkeV~VtGSFNnW~~~IpL~K~~~~s~~~~~~~k~~GvwsltL~-LpPGrYEYKFIVD-GeW~~DP~~Pt 302 (316)
.|+|+..+ .|+.|.|.+ +|. ..+|.+. ..|+|.+.+. +.+|. .|+|.|+ |....||-...
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 58896555 599999998 353 4688763 5789999885 78886 5889995 66888987765
Q ss_pred ec
Q 021198 303 VT 304 (316)
Q Consensus 303 Vt 304 (316)
..
T Consensus 106 ~~ 107 (618)
T 3m07_A 106 QK 107 (618)
T ss_dssp BS
T ss_pred ee
Confidence 43
No 31
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=92.91 E-value=0.14 Score=52.45 Aligned_cols=66 Identities=20% Similarity=0.321 Sum_probs=47.0
Q ss_pred EEEEEE-ecCCcEEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEe--CCe-----eEEEEEEEC--
Q 021198 226 VVEIQY-SGDGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD-- 291 (316)
Q Consensus 226 ~VTFtW-~g~AkeV~VtG-SFNnW~~---~IpL~K~~~~s~~~~~~~k~~GvwsltL~L--pPG-----rYEYKFIVD-- 291 (316)
.|+|+. ...|+.|.|.+ +|++|.. .++|.+. ..|+|++.+.- .+| -+.|+|.|+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~ 92 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 92 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeC
Confidence 388965 45599999999 8888864 4788762 57999998863 134 267888886
Q ss_pred CE--eeeCCCCCee
Q 021198 292 GQ--WKVDPQRESV 303 (316)
Q Consensus 292 Ge--W~~DP~~PtV 303 (316)
|. -..||-...+
T Consensus 93 ~~~~~~~DPya~~~ 106 (714)
T 2ya0_A 93 GKTVLALDPYAKSL 106 (714)
T ss_dssp TEEEEECCTTCSEE
T ss_pred CceEEecCCceeee
Confidence 64 4678876543
No 32
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=92.74 E-value=0.08 Score=56.20 Aligned_cols=65 Identities=17% Similarity=0.202 Sum_probs=48.0
Q ss_pred EEEEEec-CCcEEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCee-----EEEEEEEC--CE-
Q 021198 227 VEIQYSG-DGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVD--GQ- 293 (316)
Q Consensus 227 VTFtW~g-~AkeV~VtG-SFNnW~~---~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGr-----YEYKFIVD--Ge- 293 (316)
|+|+..+ .|+.|.|.+ ++++|.. .++|.+. ..|+|++.+.+.||. +.|+|.|+ |.
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 8896555 599999998 6778853 4788762 589999999776662 67888886 33
Q ss_pred -eeeCCCCCee
Q 021198 294 -WKVDPQRESV 303 (316)
Q Consensus 294 -W~~DP~~PtV 303 (316)
...||-...+
T Consensus 214 ~~~~DPYA~~~ 224 (877)
T 3faw_A 214 VKILDPYAKSL 224 (877)
T ss_dssp EEECCTTCSCB
T ss_pred eEecCccceec
Confidence 5678877544
No 33
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=92.31 E-value=0.025 Score=55.44 Aligned_cols=69 Identities=20% Similarity=0.417 Sum_probs=0.0
Q ss_pred CeEEEEEE-ec---CCcEEEEEeeeC---CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-C-
Q 021198 224 LEVVEIQY-SG---DGEIVEVAGSFN---GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 291 (316)
Q Consensus 224 Lk~VTFtW-~g---~AkeV~VtGSFN---nW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIV-D- 291 (316)
...|+|+. .. .++.|+|+|+-. +|++. ++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 35678876 33 389999999885 89873 677521 146789999999999 69999996 3
Q ss_pred -C-----EeeeCCCCCee
Q 021198 292 -G-----QWKVDPQRESV 303 (316)
Q Consensus 292 -G-----eW~~DP~~PtV 303 (316)
| .|...|+.-..
T Consensus 499 ~~~~~~~~We~g~nr~~~ 516 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLT 516 (527)
T ss_dssp ------------------
T ss_pred CCCcceeEecCCCCeeEE
Confidence 3 37666655443
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=90.55 E-value=0.28 Score=52.04 Aligned_cols=61 Identities=21% Similarity=0.351 Sum_probs=41.1
Q ss_pred EEEEEEecCCcEEEEEeee-------CCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEee
Q 021198 226 VVEIQYSGDGEIVEVAGSF-------NGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 295 (316)
Q Consensus 226 ~VTFtW~g~AkeV~VtGSF-------NnW~~~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~ 295 (316)
+|..--...+..+.+.|+| .+|.+.-.... ...-.+|.|+.+-.||+|.||||+.++|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~---------~~~~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 154 PVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTL---------LKKINPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGB---------CEEEETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccchhhhccccccCCCCCCcce---------eeccCCcceeeeeccCCcceeEEEeecCccc
Confidence 3444444446678888876 46776422111 0112478999999999999999999998774
No 35
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=89.58 E-value=0.081 Score=52.54 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=42.2
Q ss_pred CeEEEEE-EecCCcEEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 021198 224 LEVVEIQ-YSGDGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 291 (316)
Q Consensus 224 Lk~VTFt-W~g~AkeV~V-tGSFNnW~~---~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVD 291 (316)
...++|+ |.+.++.|.| .|+|++|.. .++|.+... +...|+|++.+......+.|+|.|.
T Consensus 22 ~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~--------~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 22 TVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLAT--------DELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp CEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEE--------CSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEec--------cCCeEEEEEEEECCCceEEEEEEEE
Confidence 3455564 5556999999 799999975 468886310 1124679999987777788888774
No 36
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=88.67 E-value=0.2 Score=50.17 Aligned_cols=60 Identities=10% Similarity=0.136 Sum_probs=40.7
Q ss_pred eEEEEEEe----c-CCcEEEEEeeeCCCccccccCC--CCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECC
Q 021198 225 EVVEIQYS----G-DGEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 292 (316)
Q Consensus 225 k~VTFtW~----g-~AkeV~VtGSFNnW~~~IpL~K--~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDG 292 (316)
..|+|+.. + .++.|.|.+.|++=...++|.+ ... +...|+|++.+......+.|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~~--------~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDP--------TGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEECT--------TSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeeccc--------cCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35777543 3 4999999999875112478875 210 12458999999866566779999974
No 37
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=88.19 E-value=0.47 Score=50.94 Aligned_cols=64 Identities=19% Similarity=0.312 Sum_probs=45.1
Q ss_pred EEEEEec-CCcEEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeC--Ce-----eEEEEEEEC--C
Q 021198 227 VEIQYSG-DGEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD--G 292 (316)
Q Consensus 227 VTFtW~g-~AkeV~VtG-SFNnW~~---~IpL~K~~~~s~~~~~~~k~~GvwsltL~Lp--PG-----rYEYKFIVD--G 292 (316)
|+|+..+ .|+.|.|.+ +|++|.. .++|.+. ..|+|++.+... +| .+.|+|.|+ |
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~ 400 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQG 400 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeCC
Confidence 7896555 499999999 8888864 4788752 578999988631 23 256777775 5
Q ss_pred E--eeeCCCCCe
Q 021198 293 Q--WKVDPQRES 302 (316)
Q Consensus 293 e--W~~DP~~Pt 302 (316)
. ...||-...
T Consensus 401 ~~~~~~DPYa~~ 412 (1014)
T 2ya1_A 401 KTVLALDPYAKS 412 (1014)
T ss_dssp EEEEECCTTCSS
T ss_pred eEEEecCcccee
Confidence 4 567886543
No 38
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=84.45 E-value=1.8 Score=35.05 Aligned_cols=65 Identities=17% Similarity=0.286 Sum_probs=47.2
Q ss_pred eEEEEEEecCCcEEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEECC--EeeeC
Q 021198 225 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 297 (316)
Q Consensus 225 k~VTFtW~g~AkeV~VtGSFN--nW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIVDG--eW~~D 297 (316)
..|++.|..+...|+|-=.+. .|... ++|.+. ...|.|..+|.|+.+ .++|+| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 467888887788898886675 48763 678652 137888999999964 899999 664 59765
Q ss_pred CCCC
Q 021198 298 PQRE 301 (316)
Q Consensus 298 P~~P 301 (316)
...-
T Consensus 78 ~g~N 81 (102)
T 2c3v_A 78 QGRD 81 (102)
T ss_dssp GGTC
T ss_pred CCcc
Confidence 5443
No 39
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=83.18 E-value=0.75 Score=40.38 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=38.7
Q ss_pred CcEEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEee
Q 021198 235 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 295 (316)
Q Consensus 235 AkeV~VtGSFNnW~~--~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~ 295 (316)
.++++|+|++++|.. ..+|.+.. ...|.|...+.|+.|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 788999999999864 35676542 2579999999998764 89999876553
No 40
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=63.29 E-value=20 Score=29.24 Aligned_cols=63 Identities=17% Similarity=0.294 Sum_probs=49.1
Q ss_pred cHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhcccchHHHHHHhh
Q 021198 157 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEE 219 (316)
Q Consensus 157 n~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~~li~eK~~~L~aae~ 219 (316)
...||.++++++..-+.++..++.+..-.+..|+.++...+.++..++..|.+....|..++.
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~ 96 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQ 96 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 456888888888888888888888888888888888888888888888888776655554443
No 41
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=60.71 E-value=7.3 Score=37.37 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.3
Q ss_pred CcEEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 021198 235 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 291 (316)
Q Consensus 235 AkeV~VtGSFNnW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVD 291 (316)
....+|+|++++|... .+|.+.. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999864 3454321 3678999998887766 7999964
No 42
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=57.91 E-value=24 Score=29.72 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=19.7
Q ss_pred EEEeCCe-eEEEEEEECCEeeeCCCC
Q 021198 276 VLWLYPG-TYEIKFIVDGQWKVDPQR 300 (316)
Q Consensus 276 tL~LpPG-rYEYKFIVDGeW~~DP~~ 300 (316)
.+.|..| .|.|+| ++|+|+.+.+-
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 4578888 899999 99999987653
No 43
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=57.82 E-value=18 Score=29.56 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhcccchHHHHHHh
Q 021198 158 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAE 218 (316)
Q Consensus 158 ~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~~li~eK~~~L~aae 218 (316)
..||..|++.+..-+.++..++.+-.-.+..|+.++...+.++..++..|......|..++
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r 97 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLR 97 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466777777777777777777766666777777777777777777777766655554443
No 44
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=54.37 E-value=32 Score=27.08 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhh
Q 021198 159 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVT 198 (316)
Q Consensus 159 ~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~ 198 (316)
-||++|+.-..--|-|-.+-...|--+|.+|+.||...+.
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~ 65 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVAL 65 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 4788888877777777777788888899888888776655
No 45
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=49.92 E-value=24 Score=27.31 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=37.7
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhh
Q 021198 160 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAE 204 (316)
Q Consensus 160 e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~ 204 (316)
||+.|++++..--.+..++-.|+.-++.++..++.|-|.++..-+
T Consensus 1 Ei~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~E~~~R~ 45 (86)
T 3swk_A 1 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQRE 45 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678899999888888888888888888888888888888776543
No 46
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.10 E-value=14 Score=35.39 Aligned_cols=54 Identities=15% Similarity=0.310 Sum_probs=37.2
Q ss_pred CcEEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEeeeCCC
Q 021198 235 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQ 299 (316)
Q Consensus 235 AkeV~VtGSFNnW~~~-------IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~DP~ 299 (316)
...++++|++++|.-. .+|.+. ....+.|...+.+..| .+|||.-++.|-.+-.
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~G 320 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGNDFG 320 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSCBC
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCcccccc
Confidence 5679999999988532 122221 1357888888877654 5899999988866543
No 47
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=46.55 E-value=43 Score=26.96 Aligned_cols=59 Identities=19% Similarity=0.307 Sum_probs=37.9
Q ss_pred CcEEEEEee--eCCCcc-ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEECCE--eeeC
Q 021198 235 GEIVEVAGS--FNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WKVD 297 (316)
Q Consensus 235 AkeV~VtGS--FNnW~~-~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPG-rYEYKFIVDGe--W~~D 297 (316)
.+.|.|.=+ |++|.. .....-.+.. ......-..|+..+.||+. .+-.+|.|+|. |-.+
T Consensus 33 eK~V~VR~T~~~D~W~t~~~dv~a~y~~----~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDNN 97 (106)
T 2djm_A 33 SKKVTVVYADGSDNWNNNGNIIAASFSG----PISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDNN 97 (106)
T ss_dssp CEEEEEEEEETTSSCSSCCCEEECEEEE----ECTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEECS
T ss_pred CcEEEEEECCCcCCCccccEEEEEEEec----CCCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcCC
Confidence 688888888 999987 4221110000 0111245689999999876 67889999986 5443
No 48
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=46.53 E-value=18 Score=43.93 Aligned_cols=72 Identities=10% Similarity=0.186 Sum_probs=45.0
Q ss_pred HHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhcccch---HHHHHHhhhCCCCeEEEEEEe
Q 021198 161 IDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD---EELIAAEESLSGLEVVEIQYS 232 (316)
Q Consensus 161 ~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~~li~eK~---~~L~aae~aLsgLk~VTFtW~ 232 (316)
++.+...|.+.+-+|..++.+|.+.+..|+.|+.+-+..+.|+++|-.+-. .||+.|++-+++|..=..+|.
T Consensus 2016 l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW~ 2090 (3245)
T 3vkg_A 2016 VEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWE 2090 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccHH
Confidence 344444455555555555566666666666677777777777777766543 788888887776654444554
No 49
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=46.44 E-value=27 Score=30.00 Aligned_cols=70 Identities=11% Similarity=0.271 Sum_probs=44.3
Q ss_pred EEEEEEec--CCcEEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCC-----e--eEEEEEEECCE-
Q 021198 226 VVEIQYSG--DGEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-----G--TYEIKFIVDGQ- 293 (316)
Q Consensus 226 ~VTFtW~g--~AkeV~VtGSFNnW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpP-----G--rYEYKFIVDGe- 293 (316)
.-++.... -.+.|.|.=+||+|... +++....+. .+......|...+.||+ + .+-++|.|+|.
T Consensus 49 ~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~-----~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~e 123 (156)
T 2eef_A 49 AGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDT-----YAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQT 123 (156)
T ss_dssp EEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCS-----SSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEE
T ss_pred EEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEcccc-----CCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCE
Confidence 33444433 37999999999999875 344332110 01123457998988886 2 57789999986
Q ss_pred -eeeCCCC
Q 021198 294 -WKVDPQR 300 (316)
Q Consensus 294 -W~~DP~~ 300 (316)
|-.+...
T Consensus 124 yWDNN~G~ 131 (156)
T 2eef_A 124 YWDSNRGK 131 (156)
T ss_dssp EEESGGGS
T ss_pred EecCCCCe
Confidence 7655433
No 50
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=44.76 E-value=54 Score=26.52 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=34.1
Q ss_pred HHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhh
Q 021198 158 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINK 202 (316)
Q Consensus 158 ~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~e 202 (316)
+.+|+.|++++-.-..+..++..||..++.++..++.|-+.++..
T Consensus 19 e~~I~~LR~qid~~~~e~a~l~leldn~~~~~edfk~KyE~E~~~ 63 (119)
T 3ol1_A 19 EEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQ 63 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 457788888887777777777777777888887788777776654
No 51
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=40.60 E-value=18 Score=33.46 Aligned_cols=51 Identities=12% Similarity=0.087 Sum_probs=37.2
Q ss_pred CcEEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEeee
Q 021198 235 GEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKV 296 (316)
Q Consensus 235 AkeV~VtGSFNnW~~--~IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW~~ 296 (316)
...++|+|++.+|.. ..+|.+.. ...|.|.....|+.| .+|||.-...|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 678999999987643 34565432 357899999999766 6799988765543
No 52
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=35.59 E-value=12 Score=28.04 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.4
Q ss_pred ECCEeeeCCCCCee
Q 021198 290 VDGQWKVDPQRESV 303 (316)
Q Consensus 290 VDGeW~~DP~~PtV 303 (316)
|||+|.+|+.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 58999999987653
No 53
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=34.86 E-value=37 Score=34.70 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=40.2
Q ss_pred ccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhcccchHHHHHHhhhCC
Q 021198 145 ADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEESLS 222 (316)
Q Consensus 145 ~~~dl~ea~~~~n~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~~li~eK~~~L~aae~aLs 222 (316)
+.+..-|.+|++-+|-.+| =+..-|.++-+++.||++..-.++-.|. .+..+.+++.+-+..|++|...|.
T Consensus 296 lkqrqeee~r~~qew~~~h---p~~~Aer~~e~a~ael~~a~k~~a~~~e----r~~~t~~~~~~~~~~~~~~n~~~~ 366 (551)
T 2b5u_A 296 VKQRQDEENRRQQEWDATH---PVEAAERNYERARAELNQANEDVARNQE----RQAKAVQVYNSRKSELDAANKTLA 366 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcC---cHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhHHHHHhhhhHHH
Confidence 3344455555544442222 1233455566666666655444433333 456778888888888888877653
No 54
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=33.27 E-value=24 Score=30.64 Aligned_cols=49 Identities=18% Similarity=0.250 Sum_probs=33.2
Q ss_pred cEEEEEee--eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCEe
Q 021198 236 EIVEVAGS--FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 294 (316)
Q Consensus 236 keV~VtGS--FNnW~~~--IpL~K~~~~s~~~~~~~k~~GvwsltL~LpPGrYEYKFIVDGeW 294 (316)
..|+|+|+ -++|... .+|+.. ...++.|.....|..|...|+|..+.-|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~----------~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVP----------ATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCC----------SSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeec----------cCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 46999998 4689764 344421 1357889888899999776666554333
No 55
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=32.72 E-value=71 Score=24.48 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=40.3
Q ss_pred ccccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhh-HhHHh--hhhhhhhhhhcccc
Q 021198 143 EGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-LQTKA--VTEINKAEKLISDK 210 (316)
Q Consensus 143 ~d~~~dl~ea~~~~n~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~-lq~ka--e~~i~ea~~li~eK 210 (316)
+.++..+.++-.+ ...++..+...+...|-++.++|.+++.--.+.+. |-.|+ +.+|+-=++|+.+.
T Consensus 13 ~~Le~~l~e~E~~-~~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLLEGE 82 (86)
T 1x8y_A 13 AAKEAKLRDLEDS-LARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGE 82 (86)
T ss_dssp TTHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCC
Confidence 3455555555555 45677777777777777777777776655444432 33333 34666666666543
No 56
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=30.42 E-value=17 Score=27.21 Aligned_cols=13 Identities=38% Similarity=0.838 Sum_probs=10.5
Q ss_pred ECCEeeeCCCCCe
Q 021198 290 VDGQWKVDPQRES 302 (316)
Q Consensus 290 VDGeW~~DP~~Pt 302 (316)
|||+|.+|+.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999987655
No 57
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=29.14 E-value=12 Score=27.44 Aligned_cols=13 Identities=38% Similarity=0.920 Sum_probs=10.1
Q ss_pred ECCEeeeCCCCCe
Q 021198 290 VDGQWKVDPQRES 302 (316)
Q Consensus 290 VDGeW~~DP~~Pt 302 (316)
|||+|.+|+.-.+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6899999986554
No 58
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=28.80 E-value=1.3e+02 Score=26.92 Aligned_cols=64 Identities=19% Similarity=0.172 Sum_probs=52.9
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhcccch-----HHHHHHhhhCC
Q 021198 159 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKD-----EELIAAEESLS 222 (316)
Q Consensus 159 ~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~~li~eK~-----~~L~aae~aLs 222 (316)
.|+..|+..+...+-++..++.++.+..+...-++.+++.+..++.+-..++- +-+|.-+.||.
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~~~a~e~~~~~LLpVlDnlerAl~ 127 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAEKYRAQSLASDLLPVLDNFERALK 127 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 56677887888888888888888888888899999999999999998888873 77777777765
No 59
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=28.57 E-value=1.2e+02 Score=27.10 Aligned_cols=41 Identities=20% Similarity=0.172 Sum_probs=16.4
Q ss_pred cccccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHH
Q 021198 142 VEGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQI 182 (316)
Q Consensus 142 ~~d~~~dl~ea~~~~n~~e~~~lk~~l~~kElel~~~k~el 182 (316)
|+.++..-.++....-+.+++.++..+.+-+-++..++.++
T Consensus 59 L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~ 99 (341)
T 3fpp_A 59 LGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTY 99 (341)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred EEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433333322233344444444444444433333333
No 60
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=28.29 E-value=1.1e+02 Score=28.95 Aligned_cols=54 Identities=7% Similarity=-0.026 Sum_probs=32.0
Q ss_pred HHhhHHHHHHhHHHHHHHHHHHhHhhHhH---HhhhhhhhhhhhcccchHHHHHHhh
Q 021198 166 FMLHQKEMELSRLKEQIEKEKLALSVLQT---KAVTEINKAEKLISDKDEELIAAEE 219 (316)
Q Consensus 166 ~~l~~kElel~~~k~el~~~k~~ls~lq~---kae~~i~ea~~li~eK~~~L~aae~ 219 (316)
.|..+.|-+..++++..+++.-.++.+.. +.+.+|.+..+.+.++..++..|..
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (487)
T 3oja_A 421 EMYVEQQSVQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELVV 477 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHHH
Confidence 35555555555666665555555555554 3444666666667777666666544
No 61
>4abm_A Charged multivesicular BODY protein 4B; cell cycle, protein transport, HIV-1; 1.80A {Homo sapiens}
Probab=27.59 E-value=89 Score=23.87 Aligned_cols=34 Identities=24% Similarity=0.230 Sum_probs=24.5
Q ss_pred HHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhc
Q 021198 174 ELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLI 207 (316)
Q Consensus 174 el~~~k~el~~~k~~ls~lq~kae~~i~ea~~li 207 (316)
++.+++.+++..+--...|+.+++.++..|.+.+
T Consensus 7 AI~~Lr~~~d~L~kkq~~L~~~i~~e~~~Ak~~~ 40 (79)
T 4abm_A 7 AIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHG 40 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666777788888888888777
No 62
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=26.48 E-value=62 Score=23.14 Aligned_cols=12 Identities=50% Similarity=0.894 Sum_probs=6.1
Q ss_pred EEeCCe-eEEEEE
Q 021198 277 LWLYPG-TYEIKF 288 (316)
Q Consensus 277 L~LpPG-rYEYKF 288 (316)
..+.|| .+.|.|
T Consensus 54 ~~~~~g~~~~~~f 66 (91)
T 1bxv_A 54 LAFSPGETFEATF 66 (91)
T ss_dssp EECSTTCEEEEEC
T ss_pred ceeCCCCEEEEEe
Confidence 345555 455555
No 63
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=25.12 E-value=1e+02 Score=20.12 Aligned_cols=20 Identities=30% Similarity=0.542 Sum_probs=13.1
Q ss_pred HHhHHHHHHHHHHHhHhhHh
Q 021198 174 ELSRLKEQIEKEKLALSVLQ 193 (316)
Q Consensus 174 el~~~k~el~~~k~~ls~lq 193 (316)
|+.-+|.||+..|.++++|.
T Consensus 10 eiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 10 EIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34456777777777777664
No 64
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=24.06 E-value=2.3e+02 Score=21.34 Aligned_cols=56 Identities=25% Similarity=0.357 Sum_probs=36.3
Q ss_pred HHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhh-HhHH--hhhhhhhhhhhcccchHHH
Q 021198 159 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-LQTK--AVTEINKAEKLISDKDEEL 214 (316)
Q Consensus 159 ~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~-lq~k--ae~~i~ea~~li~eK~~~L 214 (316)
.|.+.+..++..-|-++.++|.+++.--.+.+. |-.| .+.+|+-=++|+++...++
T Consensus 5 ~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLEGEe~Rl 63 (74)
T 2xv5_A 5 RERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERL 63 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 456777788888888888888887766555443 3444 4458888888888776555
No 65
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=24.06 E-value=1.7e+02 Score=25.96 Aligned_cols=27 Identities=26% Similarity=0.305 Sum_probs=11.0
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHH
Q 021198 160 EIDHLKFMLHQKEMELSRLKEQIEKEK 186 (316)
Q Consensus 160 e~~~lk~~l~~kElel~~~k~el~~~k 186 (316)
||..++.-...-|.++..+..+++..+
T Consensus 98 Eie~~~~~i~~lE~eile~~e~ie~~~ 124 (256)
T 3na7_A 98 EEDIAKERSNQANREIENLQNEIKRKS 124 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444433333
No 66
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=23.95 E-value=25 Score=27.11 Aligned_cols=13 Identities=38% Similarity=0.920 Sum_probs=10.2
Q ss_pred ECCEeeeCCCCCe
Q 021198 290 VDGQWKVDPQRES 302 (316)
Q Consensus 290 VDGeW~~DP~~Pt 302 (316)
|||+|.+|+.-.+
T Consensus 58 vdgeWsYD~ATkT 70 (75)
T 2rpv_A 58 VDGEWTYDDATKT 70 (75)
T ss_dssp CCSEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5889999987655
No 67
>3n27_A Fusion glycoprotein F0, linker, fusion glycoprote; fusion protein, chimera protein, fusion inhibitor, antivirus viral protein; HET: CIT; 1.80A {Hendravirus}
Probab=23.88 E-value=1e+02 Score=24.21 Aligned_cols=67 Identities=25% Similarity=0.336 Sum_probs=52.6
Q ss_pred ccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHh--------hhhhhhhhhhcccchHHHHHHhhhCC
Q 021198 156 ENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKA--------VTEINKAEKLISDKDEELIAAEESLS 222 (316)
Q Consensus 156 ~n~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~ka--------e~~i~ea~~li~eK~~~L~aae~aLs 222 (316)
+|-.-|..||.-+..-.-+...++..+..+=.+|+++|.-. .+++++|..-+++....|..+...|+
T Consensus 3 ~NA~~I~~LK~SIq~TN~AV~eL~~a~~~t~iAIqaIQd~IN~~~~~dis~~l~~a~~~l~~sk~~~~~~~~~~~ 77 (80)
T 3n27_A 3 KNADNINKLKSSIESTNEAVVKLQETAEKTVYVLTALQDYSGGSGGIDISIELNKAKSDLEESKEWIRRSNQKLD 77 (80)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcchhhhHhHHHhhHHHHHHHHHHHHHHhh
Confidence 36667888999998888899999999999999999988654 45888888888877667766665543
No 68
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=23.67 E-value=1.1e+02 Score=27.44 Aligned_cols=11 Identities=36% Similarity=0.356 Sum_probs=5.1
Q ss_pred HHHHHHhhhCC
Q 021198 212 EELIAAEESLS 222 (316)
Q Consensus 212 ~~L~aae~aLs 222 (316)
..|..|+..|.
T Consensus 143 ~~l~~a~~~l~ 153 (369)
T 4dk0_A 143 IEVNTAETNLG 153 (369)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHhh
Confidence 44445554443
No 69
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=23.44 E-value=1.8e+02 Score=23.77 Aligned_cols=61 Identities=7% Similarity=0.186 Sum_probs=48.2
Q ss_pred HHHHHHhh--HHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhhhhccc---c----hHHHHHHhhhCC
Q 021198 162 DHLKFMLH--QKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISD---K----DEELIAAEESLS 222 (316)
Q Consensus 162 ~~lk~~l~--~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~~li~e---K----~~~L~aae~aLs 222 (316)
+++..|-. ..+-.+-+...-|.+++.+|-.++.+...++.+-..+|.+ + .+.+.+|+++|.
T Consensus 36 ~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~ 105 (116)
T 3mxz_A 36 AKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVA 105 (116)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Confidence 44444443 4677888888899999999999999999999999998883 2 378888888764
No 70
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=23.11 E-value=69 Score=23.17 Aligned_cols=32 Identities=25% Similarity=0.149 Sum_probs=24.6
Q ss_pred HhHhhHhHHhhhhhhhhhhhcccch-HHHHHHh
Q 021198 187 LALSVLQTKAVTEINKAEKLISDKD-EELIAAE 218 (316)
Q Consensus 187 ~~ls~lq~kae~~i~ea~~li~eK~-~~L~aae 218 (316)
..++.|..-||.+|-+-+..-..|+ |-|+|++
T Consensus 17 ~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldAi~ 49 (51)
T 2jo8_A 17 KRLLALDPMMEQEIEEIRQKYQSKRQPILDAIE 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHccHHHHHHHHHHHHHHHHhHhhHHHHHh
Confidence 3457788888889888888888886 6666655
No 71
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=23.05 E-value=49 Score=31.02 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=19.5
Q ss_pred CCeeEEEEEEECCEee---eCCCCCeec
Q 021198 280 YPGTYEIKFIVDGQWK---VDPQRESVT 304 (316)
Q Consensus 280 pPGrYEYKFIVDGeW~---~DP~~PtVt 304 (316)
+.|.|.++|..+|+|+ +|..-|+..
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~~ 147 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTKD 147 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEET
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCcccC
Confidence 5699999999999997 566666543
No 72
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=22.91 E-value=2e+02 Score=21.75 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=30.6
Q ss_pred hHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhh-HhHHh--hhhhhhhhhhcccchH
Q 021198 150 SEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSV-LQTKA--VTEINKAEKLISDKDE 212 (316)
Q Consensus 150 ~ea~~~~n~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~-lq~ka--e~~i~ea~~li~eK~~ 212 (316)
.++..+ .+.++..+...+..-|-++.++|.+++.--.+.+. |-.|+ +.+|+-=++|+.+...
T Consensus 18 ~e~e~~-~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRkLLEGEe~ 82 (84)
T 1gk4_A 18 REMEEN-FAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEES 82 (84)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCcc
Confidence 333333 34455555566666666666666665544433332 23333 3366666666665443
No 73
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=22.86 E-value=66 Score=24.72 Aligned_cols=39 Identities=28% Similarity=0.375 Sum_probs=24.6
Q ss_pred ccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHH
Q 021198 147 FDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIEKEKL 187 (316)
Q Consensus 147 ~dl~ea~~~~n~~e~~~lk~~l~~kElel~~~k~el~~~k~ 187 (316)
++..|..++ +.-|+.|...|.+||.++.+++++|-+-+.
T Consensus 30 ~K~eELr~k--d~~I~eLEk~L~ekd~eI~~LqseLDKfrS 68 (72)
T 3nmd_A 30 EKIEELRQR--DALIDELELELDQKDELIQMLQNELDKYRS 68 (72)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333444555 335777777777777777777777665543
No 74
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=22.54 E-value=58 Score=25.79 Aligned_cols=18 Identities=28% Similarity=0.665 Sum_probs=13.0
Q ss_pred eCCeeEEEEEEECCEeee
Q 021198 279 LYPGTYEIKFIVDGQWKV 296 (316)
Q Consensus 279 LpPGrYEYKFIVDGeW~~ 296 (316)
++||.|..--+|+|+|+-
T Consensus 28 ~~PG~Y~vdI~vN~~~~~ 45 (125)
T 3bwu_D 28 LPPGTYRVDIYLNNGYMA 45 (125)
T ss_dssp SCSEEEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEECCeEcc
Confidence 567777777777777764
No 75
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=22.37 E-value=1.8e+02 Score=26.03 Aligned_cols=36 Identities=28% Similarity=0.283 Sum_probs=29.3
Q ss_pred HHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHH
Q 021198 160 EIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTK 195 (316)
Q Consensus 160 e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~k 195 (316)
|...|..+|..|+.|+..+++||+..|......+..
T Consensus 28 En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~ 63 (190)
T 4emc_A 28 ENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQ 63 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 448889999999999999999998888887554433
No 76
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=21.14 E-value=31 Score=25.36 Aligned_cols=16 Identities=19% Similarity=0.534 Sum_probs=12.4
Q ss_pred EEEEC-CEeeeCCCCCe
Q 021198 287 KFIVD-GQWKVDPQRES 302 (316)
Q Consensus 287 KFIVD-GeW~~DP~~Pt 302 (316)
..-|| |+|.+|+.-.+
T Consensus 35 ~n~~d~geWtYddaTKT 51 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKT 51 (56)
T ss_pred hcCCcCCeeEecCccee
Confidence 45677 99999987665
No 77
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=21.08 E-value=96 Score=23.12 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=19.5
Q ss_pred HHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHh
Q 021198 161 IDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQ 193 (316)
Q Consensus 161 ~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq 193 (316)
|..|......-+.+..+++.+.+..+..|+.|+
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~ 81 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVRALG 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455555555555566666666666666665554
No 78
>1svf_A Protein (fusion glycoprotein); paramyxovirus, SV5, coiled-coil, viral protein; 1.40A {Simian virus 5} SCOP: h.3.2.1
Probab=21.02 E-value=2.6e+02 Score=20.81 Aligned_cols=49 Identities=16% Similarity=0.178 Sum_probs=41.3
Q ss_pred ccHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHhHhhHhHHhhhhhhhhh
Q 021198 156 ENQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAE 204 (316)
Q Consensus 156 ~n~~e~~~lk~~l~~kElel~~~k~el~~~k~~ls~lq~kae~~i~ea~ 204 (316)
+|..+|.+||.-+..-.-....++..+...=.+++.+|.-.-.+|.++-
T Consensus 11 qNa~~I~~LK~Si~~TNeAV~el~~g~~~lavAv~~lQd~IN~~i~Pai 59 (64)
T 1svf_A 11 ENAAAILNLKNAIQKTNAAVADVVQATQSLGTAVQAVQDHINSVVSPAI 59 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3778899999999888888888888888888889999988888777663
No 79
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=21.01 E-value=1e+02 Score=24.51 Aligned_cols=69 Identities=17% Similarity=0.147 Sum_probs=34.1
Q ss_pred CCCcccccccCCccccCCCCCCCc-ccCC-cccccccchHHhhhccHHHHHHHHHHhhHHHHHHhHHHHHHH
Q 021198 114 NGSALTSKQIASFATVNHPLSEDH-LGTG-VEGADFDSSEARRRENQLEIDHLKFMLHQKEMELSRLKEQIE 183 (316)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~d~~~dl~ea~~~~n~~e~~~lk~~l~~kElel~~~k~el~ 183 (316)
-|+++---+|+|...... |+.+- -+.+ .-+|..+|-+|-...|..||+-..++|.|-.-.|.-+.+++.
T Consensus 9 vGsSSRDv~V~P~G~~~~-lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpaeIA~~~~~L~qAraDL~~l~r~~a 79 (90)
T 4b6x_A 9 IGSSSRDVQVCPRGAGAA-LRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFA 79 (90)
T ss_dssp -------------CTTHH-HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccceeeccccccHH-HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 366666677777663211 11000 0111 114888888888888999999999888877666666555543
No 80
>1pgx_A Protein G; immunoglobulin binding protein; 1.66A {Streptococcus} SCOP: d.15.7.1
Probab=20.92 E-value=26 Score=27.53 Aligned_cols=14 Identities=36% Similarity=0.781 Sum_probs=11.2
Q ss_pred ECCEeeeCCCCCee
Q 021198 290 VDGQWKVDPQRESV 303 (316)
Q Consensus 290 VDGeW~~DP~~PtV 303 (316)
|||+|.+|+.-.+.
T Consensus 52 vdgeWsYD~ATkTF 65 (83)
T 1pgx_A 52 VDGVWTYDDATKTF 65 (83)
T ss_dssp CCEEEEEETTTTEE
T ss_pred CCceEeecccceeE
Confidence 58999999987654
No 81
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=20.48 E-value=1.2e+02 Score=29.28 Aligned_cols=6 Identities=0% Similarity=0.097 Sum_probs=2.2
Q ss_pred hHHHHH
Q 021198 176 SRLKEQ 181 (316)
Q Consensus 176 ~~~k~e 181 (316)
.+++.+
T Consensus 526 ~~~~~~ 531 (597)
T 3oja_B 526 QARRTE 531 (597)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 333333
Done!