Your job contains 1 sequence.
>021200
MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD
DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA
AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID
TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR
IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL
LLQQEMDAIASFGSTQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021200
(316 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041409 - symbol:AT2G47020 species:3702 "Arabi... 1269 2.5e-129 1
TIGR_CMR|ECH_0597 - symbol:ECH_0597 "peptide chain releas... 770 1.9e-76 1
TIGR_CMR|APH_0420 - symbol:APH_0420 "peptide chain releas... 756 5.7e-75 1
TIGR_CMR|NSE_0406 - symbol:NSE_0406 "peptide chain releas... 746 6.5e-74 1
TIGR_CMR|SPO_2461 - symbol:SPO_2461 "peptide chain releas... 736 7.5e-73 1
UNIPROTKB|P0A7I0 - symbol:prfA "peptide chain release fac... 726 8.6e-72 1
UNIPROTKB|Q9KQ25 - symbol:prfA "Peptide chain release fac... 721 2.9e-71 1
TIGR_CMR|VC_2179 - symbol:VC_2179 "peptide chain release ... 721 2.9e-71 1
TIGR_CMR|CHY_2563 - symbol:CHY_2563 "peptide chain releas... 717 7.7e-71 1
TIGR_CMR|CBU_1965 - symbol:CBU_1965 "peptide chain releas... 711 3.3e-70 1
DICTYBASE|DDB_G0283175 - symbol:prfA "peptide chain relea... 708 7.0e-70 1
TIGR_CMR|GSU_3104 - symbol:GSU_3104 "peptide chain releas... 708 7.0e-70 1
TIGR_CMR|BA_5572 - symbol:BA_5572 "peptide chain release ... 689 7.2e-68 1
TIGR_CMR|SO_3833 - symbol:SO_3833 "peptide chain release ... 687 1.2e-67 1
TIGR_CMR|CPS_3552 - symbol:CPS_3552 "peptide chain releas... 686 1.5e-67 1
TIGR_CMR|CJE_1784 - symbol:CJE_1784 "peptide chain releas... 668 1.2e-65 1
TIGR_CMR|DET_1210 - symbol:DET_1210 "peptide chain releas... 666 2.0e-65 1
UNIPROTKB|Q9UGC7 - symbol:MTRF1L "Peptide chain release f... 636 3.0e-62 1
UNIPROTKB|F1NW58 - symbol:MTRF1L "Uncharacterized protein... 633 6.2e-62 1
ZFIN|ZDB-GENE-030131-8198 - symbol:mtrf1l "mitochondrial ... 624 5.5e-61 1
RGD|1598312 - symbol:Mtrf1l "mitochondrial translational ... 620 1.5e-60 1
UNIPROTKB|F1MCM1 - symbol:MTRF1L "Peptide chain release f... 615 5.0e-60 1
UNIPROTKB|Q2KI15 - symbol:MTRF1L "Peptide chain release f... 615 5.0e-60 1
UNIPROTKB|F1S7X5 - symbol:MTRF1L "Uncharacterized protein... 615 5.0e-60 1
MGI|MGI:1918830 - symbol:Mtrf1l "mitochondrial translatio... 614 6.4e-60 1
UNIPROTKB|P66016 - symbol:prfA "Peptide chain release fac... 605 5.7e-59 1
UNIPROTKB|E2QTM1 - symbol:MTRF1L "Uncharacterized protein... 591 1.7e-57 1
MGI|MGI:2384815 - symbol:Mtrf1 "mitochondrial translation... 589 2.8e-57 1
UNIPROTKB|E2RAT2 - symbol:MTRF1 "Uncharacterized protein"... 583 1.2e-56 1
UNIPROTKB|F1RJ87 - symbol:MTRF1 "Uncharacterized protein"... 582 1.6e-56 1
UNIPROTKB|Q3MHI7 - symbol:MTRF1 "Peptide chain release fa... 574 1.1e-55 1
UNIPROTKB|O75570 - symbol:MTRF1 "Peptide chain release fa... 573 1.4e-55 1
TAIR|locus:2099137 - symbol:APG3 "AT3G62910" species:3702... 568 4.8e-55 1
UNIPROTKB|E1BXF8 - symbol:MTRF1 "Uncharacterized protein"... 562 2.1e-54 1
UNIPROTKB|B4DG01 - symbol:MTRF1 "Peptide chain release fa... 547 8.0e-53 1
FB|FBgn0032486 - symbol:CG5705 species:7227 "Drosophila m... 540 4.4e-52 1
POMBASE|SPAC2F7.17 - symbol:SPAC2F7.17 "mitochondrial pep... 539 5.6e-52 1
CGD|CAL0003702 - symbol:orf19.1303 species:5476 "Candida ... 537 9.2e-52 1
SGD|S000003111 - symbol:MRF1 "Mitochondrial translation r... 526 1.3e-50 1
UNIPROTKB|F6V8L3 - symbol:MTRF1L "Uncharacterized protein... 514 2.5e-49 1
TIGR_CMR|CHY_0163 - symbol:CHY_0163 "peptide chain releas... 468 1.9e-44 1
TIGR_CMR|GSU_2278 - symbol:GSU_2278 "peptide chain releas... 453 7.3e-43 1
WB|WBGene00020993 - symbol:W03F8.3 species:6239 "Caenorha... 451 1.2e-42 1
UNIPROTKB|P07012 - symbol:prfB species:83333 "Escherichia... 448 2.5e-42 1
ZFIN|ZDB-GENE-050220-8 - symbol:zgc:113104 "zgc:113104" s... 445 5.2e-42 1
ASPGD|ASPL0000035902 - symbol:AN3462 species:162425 "Emer... 443 8.4e-42 1
TIGR_CMR|APH_0479 - symbol:APH_0479 "peptide chain releas... 419 2.9e-39 1
TIGR_CMR|CJE_1628 - symbol:CJE_1628 "peptide chain releas... 411 2.1e-38 1
TIGR_CMR|SPO_2585 - symbol:SPO_2585 "peptide chain releas... 405 8.9e-38 1
DICTYBASE|DDB_G0288835 - symbol:prfB "class I peptide cha... 402 1.9e-37 1
TAIR|locus:2010748 - symbol:AT1G56350 species:3702 "Arabi... 391 2.7e-36 1
UNIPROTKB|Q3Z8Y6 - symbol:prfB "Peptide chain release fac... 389 4.4e-36 1
TIGR_CMR|DET_0570 - symbol:DET_0570 "peptide chain releas... 389 4.4e-36 1
TIGR_CMR|ECH_0705 - symbol:ECH_0705 "peptide chain releas... 376 1.1e-34 1
TIGR_CMR|NSE_0604 - symbol:NSE_0604 "peptide chain releas... 367 9.5e-34 1
UNIPROTKB|Q5TF45 - symbol:MTRF1L "Peptide chain release f... 334 3.0e-30 1
TAIR|locus:2158936 - symbol:HCF109 "high chlorophyll fluo... 329 1.0e-29 1
UNIPROTKB|P66026 - symbol:prfB "Peptide chain release fac... 320 9.1e-29 1
GENEDB_PFALCIPARUM|PF14_0265 - symbol:PF14_0265 "peptide ... 300 1.2e-26 1
UNIPROTKB|Q8ILH8 - symbol:PF14_0265 "Peptide chain releas... 300 1.2e-26 1
UNIPROTKB|Q74EJ1 - symbol:GSU0971 "Hydrolase, putative" s... 151 2.0e-10 1
TIGR_CMR|GSU_0971 - symbol:GSU_0971 "peptidyl-tRNA hydrol... 151 2.0e-10 1
GENEDB_PFALCIPARUM|MAL7P1.20 - symbol:MAL7P1.20 "peptide ... 146 1.1e-07 1
UNIPROTKB|Q8IC21 - symbol:MAL7P1.20 "Peptide chain releas... 146 1.1e-07 1
CGD|CAL0005347 - symbol:orf19.5488 species:5476 "Candida ... 120 4.5e-06 1
TAIR|locus:2082563 - symbol:PrfB3 "peptide chain release ... 132 5.9e-06 1
TAIR|locus:2006897 - symbol:AT1G33330 species:3702 "Arabi... 128 6.0e-06 1
UNIPROTKB|Q74FR0 - symbol:GSU0546 "Peptidyl-tRNA hydrolas... 106 1.9e-05 1
TIGR_CMR|GSU_0546 - symbol:GSU_0546 "peptidyl-tRNA hydrol... 106 1.9e-05 1
POMBASE|SPBC1105.18c - symbol:SPBC1105.18c "peptide relea... 106 0.00035 1
>TAIR|locus:2041409 [details] [associations]
symbol:AT2G47020 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0006415
"translational termination" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.30.160.20 GO:GO:0016149
KO:K02835 OMA:EMPEINP TIGRFAMs:TIGR00019 EMBL:BT030058
IPI:IPI00517548 RefSeq:NP_182225.3 UniGene:At.43988
ProteinModelPortal:A2RVR7 SMR:A2RVR7 PRIDE:A2RVR7
EnsemblPlants:AT2G47020.1 GeneID:819316 KEGG:ath:AT2G47020
TAIR:At2g47020 PhylomeDB:A2RVR7 Genevestigator:Q3E6W0
Uniprot:A2RVR7
Length = 413
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 244/315 (77%), Positives = 273/315 (86%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
M LI++LR KQKEIDGLKSL+ E S+DKDMLD+A EL A++EEKR PKD
Sbjct: 98 MLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKD 157
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
+ADERDCILEVRAGTGGEEASLFA+D+F+MYERYSQKKGWKF++V +TESD++GYKEASA
Sbjct: 158 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 217
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
AI G VYGKLKFESGIHRVQR+P+TEKSGR+HTSA+SVAILPQADEVDV+LRNEDLRID
Sbjct: 218 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRID 277
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSR 240
TYRSGGSGGQHANTTNSAVR+ H+PTGM +SIQDERSQHMN YE+ER R
Sbjct: 278 TYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLR 337
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
I SRSKLRS+QIGSGDRS RIRTYNFPQGRVTDHRVGITHHAI DMM+GENLD+FIDAL
Sbjct: 338 IQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDAL 397
Query: 301 LLQQEMDAIASFGST 315
LL+QEMDAIASF ST
Sbjct: 398 LLRQEMDAIASFSST 412
>TIGR_CMR|ECH_0597 [details] [associations]
symbol:ECH_0597 "peptide chain release factor 1"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:YP_507408.1
ProteinModelPortal:Q2GGM5 SMR:Q2GGM5 STRING:Q2GGM5 GeneID:3927422
KEGG:ech:ECH_0597 PATRIC:20576648
BioCyc:ECHA205920:GJNR-599-MONOMER Uniprot:Q2GGM5
Length = 359
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 146/307 (47%), Positives = 205/307 (66%)
Query: 3 LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDA 62
+I + QK+I GL+ LI D ++ +A EE + + PKD
Sbjct: 48 VIDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKD 107
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
D R+ ILE+RAGTGGEEA+LF D+++MY +Y+++K WKFE + + + + G+KE S I
Sbjct: 108 DARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCI 167
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
SG V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++ +DLRID Y
Sbjct: 168 SGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVY 227
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
RS G GGQ NTT+SAVR+THIP+G+ + QDE+SQH N Y +E+ +
Sbjct: 228 RSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRD 287
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
S++R QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+ NLD FI+AL+
Sbjct: 288 AEISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIA 347
Query: 303 QQEMDAI 309
+ E + +
Sbjct: 348 EDEANKL 354
>TIGR_CMR|APH_0420 [details] [associations]
symbol:APH_0420 "peptide chain release factor 1"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 RefSeq:YP_505023.1
ProteinModelPortal:Q2GKS8 STRING:Q2GKS8 GeneID:3929978
KEGG:aph:APH_0420 PATRIC:20949454 OMA:EMPEINP ProtClustDB:PRK00591
BioCyc:APHA212042:GHPM-447-MONOMER TIGRFAMs:TIGR00019
Uniprot:Q2GKS8
Length = 359
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 145/309 (46%), Positives = 206/309 (66%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
M LI + ++ QKEI L+ L+ S D ++ +A +E + + PKD
Sbjct: 46 MSLIEKYKSTQKEIAELEELVNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D R+ ILE+RAGTGGEEA+LF ++++MY +Y+++K WK E + ++ + + GYKEAS
Sbjct: 106 RDDSRNAILEIRAGTGGEEAALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASF 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+I G V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++ +DLRID
Sbjct: 166 SIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSR 240
YRS G GGQ NTT+SAVR+THIPTG+ + QDE+SQH N Y +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
SK+R QIGSGDRSERIRTYNF Q R+TDHR+ +T + + +M+ +LD FIDAL
Sbjct: 286 REEEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINLTSYRLDYVMKEGDLDEFIDAL 345
Query: 301 LLQQEMDAI 309
+ + + +
Sbjct: 346 VADDQANKL 354
>TIGR_CMR|NSE_0406 [details] [associations]
symbol:NSE_0406 "peptide chain release factor 1"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_506293.1 ProteinModelPortal:Q2GE03 SMR:Q2GE03
STRING:Q2GE03 GeneID:3931950 KEGG:nse:NSE_0406 PATRIC:22680869
ProtClustDB:CLSK2527657 BioCyc:NSEN222891:GHFU-429-MONOMER
Uniprot:Q2GE03
Length = 367
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 142/311 (45%), Positives = 213/311 (68%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
+ LI+ + ++E L+ L+ ED+++ ++ +L D + PKD
Sbjct: 47 VELIARYKKLKEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKD 106
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D + +LEVRAGTGG+EA+LFA +F MY++Y+++ W+FE++ ++ +++ GYKEA+A
Sbjct: 107 KDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANA 166
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+ISG V+ KLKFESG+HRVQRVP TE +GR+HTS +VA+LP+ ++VDV++ ++DLRID
Sbjct: 167 SISGSDVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEPEDVDVKINDKDLRID 226
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSR 240
YRS G GGQ NTT+SAVR+THIPTG+ + QDE+SQH N YE+ER++
Sbjct: 227 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNK 286
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMM-EGENLDIFIDA 299
+ S +R QIGSG+RSE+ RTYNFPQGR+TDHR+ +T + I++ + EGE L+ I+A
Sbjct: 287 VQQEISSMRKSQIGSGERSEKTRTYNFPQGRITDHRINLTTYRINETVKEGE-LEPIIEA 345
Query: 300 LLLQQEMDAIA 310
L+ + E +A
Sbjct: 346 LIRENEARMLA 356
>TIGR_CMR|SPO_2461 [details] [associations]
symbol:SPO_2461 "peptide chain release factor 1"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
HSSP:P0A7I0 ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 OMA:SVMLEIR
RefSeq:YP_167678.1 ProteinModelPortal:Q5LQM7 GeneID:3194030
KEGG:sil:SPO2461 PATRIC:23378321 Uniprot:Q5LQM7
Length = 351
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 147/315 (46%), Positives = 205/315 (65%)
Query: 5 SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRXXXXXXXXXXP 58
S+LR ++I + L + E D DM +A EEL L P
Sbjct: 38 SDLRPVVEQIAAWRQLCADMDEARAMLSDPDMKALAEEELPLLKARLPEAEQALQLALLP 97
Query: 59 KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
KD AD R +LE+R GTGG+EA+LFA D+ +MY+RY++ +GWK E++ + E++L G KE
Sbjct: 98 KDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEV 157
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
A ISG V+ +LK+ESG+HRVQRVP TE GR+HTSA +VA+LP+A +VD+++ D+R
Sbjct: 158 VARISGENVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQIDPGDIR 217
Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMER 238
IDT RS G+GGQH NTT+SAVR+TH+P+G+ ++ E+SQH N Y++ER
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLER 276
Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
R+ RS RS Q+G+GDRSERIRTYNFPQGR+TDHR+ +T + + +M+G+ LD ID
Sbjct: 277 QRLDRERSASRSAQVGTGDRSERIRTYNFPQGRMTDHRINLTLYKLDAVMQGD-LDEVID 335
Query: 299 ALLLQQEMDAIASFG 313
AL + +A G
Sbjct: 336 ALAADGQARMLAEMG 350
>UNIPROTKB|P0A7I0 [details] [associations]
symbol:prfA "peptide chain release factor RF1"
species:83333 "Escherichia coli K-12" [GO:0043022 "ribosome
binding" evidence=IDA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA;IDA] [GO:0006415
"translational termination" evidence=IEA;IMP] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:3.30.160.20 GO:GO:0043022 GO:GO:0016149 EMBL:M25323
EMBL:U18555 EMBL:D28567 PDB:2B3T PDBsum:2B3T eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 EMBL:M11519 PIR:H64867 RefSeq:NP_415729.1
RefSeq:YP_489478.1 ProteinModelPortal:P0A7I0 SMR:P0A7I0
DIP:DIP-35936N IntAct:P0A7I0 MINT:MINT-1219241 PaxDb:P0A7I0
PRIDE:P0A7I0 EnsemblBacteria:EBESCT00000004821
EnsemblBacteria:EBESCT00000015260 GeneID:12931113 GeneID:949002
KEGG:ecj:Y75_p1183 KEGG:eco:b1211 PATRIC:32117674 EchoBASE:EB0754
EcoGene:EG10761 BioCyc:EcoCyc:EG10761-MONOMER
BioCyc:ECOL316407:JW1202-MONOMER EvolutionaryTrace:P0A7I0
Genevestigator:P0A7I0 Uniprot:P0A7I0
Length = 360
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 136/292 (46%), Positives = 198/292 (67%)
Query: 26 EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAV 85
+D +M +MA +EL A ++ ++ PKD DER+ LEVRAGTGG+EA+LFA
Sbjct: 70 DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129
Query: 86 DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
D+F+MY RY++ + W+ E++ +E + GYKE A ISG GVYG+LKFESG HRVQRVP
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189
Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
TE GR+HTSA +VA++P+ + ++ + DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249
Query: 205 PTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
PTG+ + QDERSQH N + E ++ + + R +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRT 309
Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
YNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ + + D +A+ +
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIIQEHQADQLAALSEQE 360
>UNIPROTKB|Q9KQ25 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR Gene3D:3.30.160.20 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 133/287 (46%), Positives = 195/287 (67%)
Query: 26 EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAV 85
+D +M +MA +E+ A +R PKD D+R+C LE+RAG GG+EA +FA
Sbjct: 72 DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131
Query: 86 DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
D+F+MY R+++KKGW+ EV+ +E++ GYKE A ++G G YG LKFESG HRVQRVP
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191
Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
TE GR+HTSA +VA++P+ E ++ ++ DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251
Query: 205 PTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
PTG+ + QDERSQH N + E S+ S R +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311
Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
YN+PQGRV+DHR+ +T + ++++MEG+ + ID ++ + + D +A+
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEGD-MQSLIDPVIHEHQADQLAA 357
>TIGR_CMR|VC_2179 [details] [associations]
symbol:VC_2179 "peptide chain release factor 1" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0016149 eggNOG:COG0216 KO:K02835 OMA:GEAGGYK
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 PIR:B82109
RefSeq:NP_231810.1 ProteinModelPortal:Q9KQ25 SMR:Q9KQ25
DNASU:2613315 GeneID:2613315 KEGG:vch:VC2179 PATRIC:20083371
Uniprot:Q9KQ25
Length = 362
Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
Identities = 133/287 (46%), Positives = 195/287 (67%)
Query: 26 EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAV 85
+D +M +MA +E+ A +R PKD D+R+C LE+RAG GG+EA +FA
Sbjct: 72 DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131
Query: 86 DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
D+F+MY R+++KKGW+ EV+ +E++ GYKE A ++G G YG LKFESG HRVQRVP
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191
Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
TE GR+HTSA +VA++P+ E ++ ++ DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251
Query: 205 PTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
PTG+ + QDERSQH N + E S+ S R +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311
Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
YN+PQGRV+DHR+ +T + ++++MEG+ + ID ++ + + D +A+
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEGD-MQSLIDPVIHEHQADQLAA 357
>TIGR_CMR|CHY_2563 [details] [associations]
symbol:CHY_2563 "peptide chain release factor 1"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0
OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
RefSeq:YP_361356.1 ProteinModelPortal:Q3A928 SMR:Q3A928
STRING:Q3A928 GeneID:3727190 KEGG:chy:CHY_2563 PATRIC:21278175
BioCyc:CHYD246194:GJCN-2562-MONOMER Uniprot:Q3A928
Length = 358
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 137/304 (45%), Positives = 192/304 (63%)
Query: 6 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADER 65
E + KEI+ + ++ E D D ++ EL + + PKD DE+
Sbjct: 50 EYKKTVKEIEDAERMLDE-KLDPDFRELVQSELHDLKERREELEAKLKILLLPKDPNDEK 108
Query: 66 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
+ I+E+RAG GGEEA+LFA D+F+MY +Y+ + GWK E++ +DL G+KE I G
Sbjct: 109 NVIMEIRAGAGGEEAALFAGDLFRMYSKYADRMGWKVEIMDSHPTDLGGFKEVIFTIEGK 168
Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
GVY ++KFESG+HRVQRVP TE GR+HTS +VA+LP+A+EV+V + DLRID + +
Sbjct: 169 GVYSRMKFESGVHRVQRVPTTESGGRIHTSTATVAVLPEAEEVEVEINPNDLRIDVFCAS 228
Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSR 245
G+GGQH N T SAVR+THIPTG+ ++ QDE+SQH N + R
Sbjct: 229 GAGGQHVNKTESAVRITHIPTGIVVTCQDEKSQHKNKERAMKILRARLLDKARQEQEAEL 288
Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
+ R Q+G+GDRSERIRTYNFPQ RVTDHR+G+T H + ++EG+ LD IDAL+ +
Sbjct: 289 ASARKSQVGTGDRSERIRTYNFPQNRVTDHRIGLTLHRLDAVLEGD-LDEIIDALITTDQ 347
Query: 306 MDAI 309
+ +
Sbjct: 348 AERL 351
>TIGR_CMR|CBU_1965 [details] [associations]
symbol:CBU_1965 "peptide chain release factor 1"
species:227377 "Coxiella burnetii RSA 493" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0016149 EMBL:X78969 eggNOG:COG0216 HOGENOM:HOG000074815
KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591 TIGRFAMs:TIGR00019
PIR:A61648 RefSeq:NP_820940.1 ProteinModelPortal:P47849 SMR:P47849
PRIDE:P47849 GeneID:1209878 KEGG:cbu:CBU_1965 PATRIC:17932673
BioCyc:CBUR227377:GJ7S-1939-MONOMER Uniprot:P47849
Length = 361
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 136/306 (44%), Positives = 200/306 (65%)
Query: 6 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADER 65
+ + +K I+ + + E +D ++ +A EEL +++ PKD DER
Sbjct: 54 QFQQNEKAIESAEEMQQE--KDPELRKLAEEELEQLTLKKEELEDQLKLLLVPKDPNDER 111
Query: 66 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
+ LE+RAGTGG EA++FA D+F+MY RY++ KGW+ +V E + G+KE A + G
Sbjct: 112 NVFLEIRAGTGGNEAAIFAGDLFRMYARYAETKGWRVNIVSAHEGEHGGFKEVIARVIGE 171
Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRS 184
GVY +LKFESG HRVQRVP+TE GR+HTSA +VAI+P+ DE+D +++ +LRIDT+R+
Sbjct: 172 GVYSQLKFESGAHRVQRVPVTESQGRIHTSACTVAIMPEVDEIDQIKINPAELRIDTFRA 231
Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLS 244
G+GGQH N T+SA+R+TH+PTG+ + QDERSQH N ER++
Sbjct: 232 SGAGGQHVNRTDSAIRITHLPTGVVVECQDERSQHKNKARAMSLLQSKLLAAERAKQDQE 291
Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
++ R +GSGDRSERIRTYNFPQGRVTDHR+ +T + + +++EG+ LD I L+ +
Sbjct: 292 QAAKRKSLVGSGDRSERIRTYNFPQGRVTDHRINLTLYQLDEVIEGD-LDPVIGPLIREL 350
Query: 305 EMDAIA 310
+ + +A
Sbjct: 351 QAEQLA 356
>DICTYBASE|DDB_G0283175 [details] [associations]
symbol:prfA "peptide chain release factor 1"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
dictyBase:DDB_G0283175 GO:GO:0005737 GenomeReviews:CM000153_GR
Gene3D:3.30.160.20 EMBL:AAFI02000051 GO:GO:0016149 eggNOG:COG0216
KO:K02835 RefSeq:XP_639198.1 ProteinModelPortal:Q54RE7
STRING:Q54RE7 EnsemblProtists:DDB0237484 GeneID:8623973
KEGG:ddi:DDB_G0283175 InParanoid:Q54RE7 OMA:HAAICIN
ProtClustDB:CLSZ2430394 Uniprot:Q54RE7
Length = 430
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 144/311 (46%), Positives = 203/311 (65%)
Query: 6 ELRTKQKEIDGLKS-LIYECSED-KDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDAD 63
+L K KE+ L++ L+ E ED K M+ +L E KDDA
Sbjct: 123 DLIEKLKELKELQTMLVEETDEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDAG 182
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
D ILE+RAGTGG EA LF DV++MY Y +KGW FE + ++ +++ GY++ + ++S
Sbjct: 183 --DAILEIRAGTGGSEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVS 240
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G GV+G LK+ESG+HRVQRVPLTE GR+HTS ++VAILP+ +VD+++ + DL++D YR
Sbjct: 241 GKGVFGFLKYESGVHRVQRVPLTETQGRIHTSTITVAILPEPKDVDIQIHDRDLKVDIYR 300
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHL 243
S G+GGQ NTT+SAVR+TH+PTG+T+++QDERSQH N YE ER R+
Sbjct: 301 SSGNGGQSVNTTDSAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQN 360
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R R+ QIGS RSERIRTYN+PQ R+TDHRV I + ++ M + LD FID +L++
Sbjct: 361 ERVSERNAQIGSALRSERIRTYNYPQDRITDHRVSINGN-LNSCMNSDGLDSFIDEILVE 419
Query: 304 ---QEMDAIAS 311
+E++ + S
Sbjct: 420 FHTKELEELLS 430
>TIGR_CMR|GSU_3104 [details] [associations]
symbol:GSU_3104 "peptide chain release factor 1"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 OMA:SVMLEIR RefSeq:NP_954145.1
ProteinModelPortal:Q748B1 SMR:Q748B1 GeneID:2688463
KEGG:gsu:GSU3104 PATRIC:22029063
BioCyc:GSUL243231:GH27-3086-MONOMER Uniprot:Q748B1
Length = 355
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 139/307 (45%), Positives = 200/307 (65%)
Query: 3 LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDA 62
LI RT +K ++ ++ E D +M +MA EL ++ P+D
Sbjct: 44 LIESYRTYKKVLEEMEGN-RELLADPEMKEMAQAELEELEQRQEELEGEIKLLLLPRDPN 102
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
D+R+ ILE+RAGTGG+E++LFA D+F+MY R++++ WK EV+ +ES+ G+KE A I
Sbjct: 103 DDRNVILEIRAGTGGDESALFAGDLFRMYSRFAERNRWKVEVMSASESERGGFKEIVALI 162
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
G GV+ KLK+ESG HRVQRVP TE GR+HTSA +VA+LP+A++++V + DL+ID Y
Sbjct: 163 EGQGVFAKLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAEDIEVDINPADLKIDVY 222
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
R+ G+GGQH N T SAVR+THIPTG+ + QDERSQ N + +
Sbjct: 223 RASGAGGQHVNKTESAVRITHIPTGIVVECQDERSQIKNRAKAMKVLKTKILDGLHQEQN 282
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
+ R +Q+GSGDRSERIRTYNFPQGR+TDHR+G+T + + +MEG+ ++ +DAL
Sbjct: 283 ARIAADRKQQVGSGDRSERIRTYNFPQGRMTDHRIGLTLYRLDSLMEGDIAEV-VDALRT 341
Query: 303 QQEMDAI 309
+M+A+
Sbjct: 342 HYQMEAL 348
>TIGR_CMR|BA_5572 [details] [associations]
symbol:BA_5572 "peptide chain release factor 1"
species:198094 "Bacillus anthracis str. Ames" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP
ProtClustDB:PRK00591 TIGRFAMs:TIGR00019 RefSeq:NP_847729.1
RefSeq:YP_022240.1 RefSeq:YP_031417.1 ProteinModelPortal:Q81JX1
SMR:Q81JX1 DNASU:1085262 EnsemblBacteria:EBBACT00000012375
EnsemblBacteria:EBBACT00000014683 EnsemblBacteria:EBBACT00000022198
GeneID:1085262 GeneID:2819896 GeneID:2852042 KEGG:ban:BA_5572
KEGG:bar:GBAA_5572 KEGG:bat:BAS5178
BioCyc:BANT260799:GJAJ-5253-MONOMER
BioCyc:BANT261594:GJ7F-5432-MONOMER Uniprot:Q81JX1
Length = 355
Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
Identities = 133/306 (43%), Positives = 199/306 (65%)
Query: 6 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADER 65
E + ++++ K+++ E D +M +M EE+ +EK PKD D++
Sbjct: 50 EYKDVREQLKDAKAML-EDKLDAEMREMVKEEVSELESQEKTLSERLKILLVPKDPNDDK 108
Query: 66 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
+ I+EVR GG+EA+LFA D+++MY RY++ +GWK E++ + ++L GYKE I+G
Sbjct: 109 NVIVEVRGAAGGDEAALFAGDLYRMYSRYAEVQGWKTEIIEASYTELGGYKEIIFMINGK 168
Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
G + KLKFE+G HRVQRVP TE GR+HTS +VA+LP+A+EV++ + +D+R+DT+ S
Sbjct: 169 GAFAKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEEVEIDIHEKDVRVDTFASS 228
Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSR 245
G GGQ NTT SAVR+TH+PTG+ +S QDE+SQ N Y+ R
Sbjct: 229 GPGGQSVNTTMSAVRLTHLPTGVVVSCQDEKSQIKNKEKAMKVLRARVYDKFRQEAQAEY 288
Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ-- 303
+ R + +G+GDRSERIRTYNFPQ RVTDHR+G+T + +++G+ LD FI+AL+++
Sbjct: 289 DQNRKQAVGTGDRSERIRTYNFPQNRVTDHRIGLTIQKLDQILQGK-LDDFINALVMEDQ 347
Query: 304 -QEMDA 308
Q M+A
Sbjct: 348 AQRMEA 353
>TIGR_CMR|SO_3833 [details] [associations]
symbol:SO_3833 "peptide chain release factor 1"
species:211586 "Shewanella oneidensis MR-1" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:GEAGGYK ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:NP_719366.1 ProteinModelPortal:Q8EAR3
SMR:Q8EAR3 GeneID:1171478 KEGG:son:SO_3833 PATRIC:23527352
Uniprot:Q8EAR3
Length = 363
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 129/307 (42%), Positives = 194/307 (63%)
Query: 11 QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILE 70
Q +++ K ++ E +D +M +MA EE+ A E +R PKD D+ + +E
Sbjct: 59 QADLESAKEMLEE--DDAEMREMAQEEIKAAKVELERLEAELQILLLPKDPNDDTNAFIE 116
Query: 71 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
+RAG GG+EA++FA D+F+MY RY++ W+ E++ E + G+KE +SG G YGK
Sbjct: 117 IRAGAGGDEAAIFAGDLFRMYSRYAEANRWQLEIMSSNEGEHGGFKEIIVKVSGEGAYGK 176
Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
LKFESG HRVQRVP TE GRVHTSAV+V ++ + E + + + DL++DT+RS G+GG
Sbjct: 177 LKFESGGHRVQRVPETESQGRVHTSAVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGG 236
Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLR 249
QH N T+SA+R+THIPTG+ + QD+RSQH N +E + + R
Sbjct: 237 QHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLAARIQAVEDEKRRSAEESTR 296
Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
+ SGDRSER+RTYNFPQGRV++HR+ +T + ++++MEG+ LD + L+ + + D +
Sbjct: 297 RSLVASGDRSERVRTYNFPQGRVSEHRINLTLYRLNEVMEGD-LDAILGPLMQEHQADLL 355
Query: 310 ASFGSTQ 316
A+ Q
Sbjct: 356 AALADEQ 362
>TIGR_CMR|CPS_3552 [details] [associations]
symbol:CPS_3552 "peptide chain release factor 1"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 OMA:EMPEINP
TIGRFAMs:TIGR00019 RefSeq:YP_270226.1 ProteinModelPortal:Q47Y94
SMR:Q47Y94 STRING:Q47Y94 GeneID:3522324 KEGG:cps:CPS_3552
PATRIC:21470035 BioCyc:CPSY167879:GI48-3580-MONOMER Uniprot:Q47Y94
Length = 362
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 126/286 (44%), Positives = 185/286 (64%)
Query: 26 EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAV 85
+D DM +MA EE A P+D D+ +C +E+RAG GG+EA++FA
Sbjct: 72 DDPDMREMAQEEFKDAKKAVADIADELQILLLPRDPNDDNNCFVEIRAGAGGDEAAIFAG 131
Query: 86 DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
D+F+MY RY++KKGWK EV+ ES+ GYKE ++G GV+G +KFESG HRVQRVP
Sbjct: 132 DLFRMYSRYAEKKGWKIEVMNSNESEQGGYKELIMKVNGEGVFGHMKFESGGHRVQRVPA 191
Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
TE GRVHTSA +V ++P+ E D + + DL++DT+R+ G+GGQH N T+SA+R+THI
Sbjct: 192 TESQGRVHTSACTVVVMPEIPEADAIEINKADLKVDTFRASGAGGQHVNKTDSAIRITHI 251
Query: 205 PTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
PTG+ + Q++RSQH N + E + R + SGDRSERIRT
Sbjct: 252 PTGVVVECQEQRSQHKNRAQAMSVLQARLQQAEDEKRRSEEESSRRNLVASGDRSERIRT 311
Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
YNFPQGR++DHR+ +T + ++++MEG +L + ++ ++ + + D +A
Sbjct: 312 YNFPQGRMSDHRINLTLYRLNEIMEG-SLQLVMEPIMQENQADLLA 356
>TIGR_CMR|CJE_1784 [details] [associations]
symbol:CJE_1784 "peptide chain release factor 1"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 OMA:EMPEINP ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_179756.1 ProteinModelPortal:Q5HSH9
SMR:Q5HSH9 STRING:Q5HSH9 GeneID:3232411 KEGG:cjr:CJE1784
PATRIC:20045378 BioCyc:CJEJ195099:GJC0-1814-MONOMER Uniprot:Q5HSH9
Length = 355
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 124/283 (43%), Positives = 178/283 (62%)
Query: 27 DKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEASLFAVD 86
D ++ ++A EEL + + + PKD DER+ LE+RAG GG+EASLF D
Sbjct: 68 DPELGELAKEELKTLEELKPKLEEEIKILLLPKDPNDERNIFLEIRAGAGGDEASLFVGD 127
Query: 87 VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
+ K Y RY++ +G+K E+V +E + G+KE + G G Y +LK+E G HRVQRVP T
Sbjct: 128 LVKAYARYAENRGYKLEIVSSSEGSVGGFKEIIMLVKGTGAYSRLKYEGGTHRVQRVPQT 187
Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
E GRVHTSA++VA++P+ D++++ + DL++D RS G GGQ NTT+SAVR+THIPT
Sbjct: 188 ESQGRVHTSAITVAVMPEVDDIEIEINPNDLKVDVMRSSGHGGQSVNTTDSAVRITHIPT 247
Query: 207 GMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
G+ + QD +SQH N YEM+ S S+ R Q+GSGDRSERIRTYN
Sbjct: 248 GIVVVNQDGKSQHKNKESAMKVLKARLYEMQESERLAKESEARKSQVGSGDRSERIRTYN 307
Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
FPQ R++DHR+ +T + + +M+ D I+ L+ + A+
Sbjct: 308 FPQNRISDHRINLTLYRLDAIMQDGLFDEIIEPLITHHQAQAL 350
>TIGR_CMR|DET_1210 [details] [associations]
symbol:DET_1210 "peptide chain release factor 1"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00093
InterPro:IPR000352 InterPro:IPR004373 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 HSSP:P0A7I0 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 RefSeq:YP_181923.1 ProteinModelPortal:Q3Z776
STRING:Q3Z776 GeneID:3229489 KEGG:det:DET1210 PATRIC:21609455
OMA:SVMLEIR BioCyc:DETH243164:GJNF-1211-MONOMER Uniprot:Q3Z776
Length = 355
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 127/298 (42%), Positives = 186/298 (62%)
Query: 12 KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILEV 71
KE++ K+L+ E +D+DM DM E+ PKD D++ I+E+
Sbjct: 56 KELEDTKNLL-EIEKDEDMKDMVRGEIASLEKSMADLYTQMTLELLPKDPNDDKSIIMEI 114
Query: 72 RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
RAGTGG+EA LFA D++KMY RY+ K WK EV+ + + KE ++G G + +L
Sbjct: 115 RAGTGGDEAGLFAADLYKMYTRYALLKNWKTEVIDINGNVAGIIKEVVFEVNGKGAFSRL 174
Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
K+E G+HRVQRVP TE SGR+HTS +VA+LPQ +EVD+ + +D+R+D + S G+GGQ+
Sbjct: 175 KYERGVHRVQRVPQTEASGRIHTSTATVAVLPQVEEVDIDINMDDVRVDIFHSSGAGGQN 234
Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSE 251
+A+R+THIPTG+ + QDERSQ N E+E+S++ R++ R
Sbjct: 235 VQKVATAIRLTHIPTGLVVCCQDERSQLKNKNKAFAVLRARLMELEQSKVDEERTESRRA 294
Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
Q+G DRSE+IRTYNFPQ R+TDHR+G+T H + ++EG LD ID L ++ + +
Sbjct: 295 QVGQADRSEKIRTYNFPQDRLTDHRIGLTAHNLPHILEGY-LDEIIDTLATHEQTELL 351
>UNIPROTKB|Q9UGC7 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005739 EMBL:CH471051 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:AL080276 CTD:54516 eggNOG:COG0216
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 EMBL:AK027684
EMBL:AK095240 EMBL:AK290662 EMBL:BC011873 EMBL:BC014428
EMBL:BC105973 IPI:IPI00295737 IPI:IPI00477207 IPI:IPI00513970
IPI:IPI00890825 RefSeq:NP_001107656.1 RefSeq:NP_061914.3
UniGene:Hs.225836 HSSP:Q9X183 ProteinModelPortal:Q9UGC7 SMR:Q9UGC7
STRING:Q9UGC7 PhosphoSite:Q9UGC7 DMDM:74753314 PRIDE:Q9UGC7
DNASU:54516 Ensembl:ENST00000367230 Ensembl:ENST00000367231
Ensembl:ENST00000367233 Ensembl:ENST00000414771 GeneID:54516
KEGG:hsa:54516 UCSC:uc003qpi.4 UCSC:uc003qpk.4 UCSC:uc003qpl.4
GeneCards:GC06M153308 H-InvDB:HIX0006308 HGNC:HGNC:21051
HPA:HPA036367 MIM:613542 neXtProt:NX_Q9UGC7 PharmGKB:PA134870441
InParanoid:Q9UGC7 OMA:YSMKLEE PhylomeDB:Q9UGC7 GenomeRNAi:54516
NextBio:56904 ArrayExpress:Q9UGC7 Bgee:Q9UGC7 CleanEx:HS_MTRF1L
Genevestigator:Q9UGC7 Uniprot:Q9UGC7
Length = 380
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 132/299 (44%), Positives = 180/299 (60%)
Query: 3 LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDA 62
+I L K++E+ + L+++ E++D+ +A E+ L E + P ++
Sbjct: 67 VIKLLNEKERELRETEHLLHD--ENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEET 124
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
DE D ILEV AG GG+EA LF ++F MY++Y+ K W FE + S+L G + ASA+I
Sbjct: 125 DENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASI 184
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
G Y +KFE G+HRVQRVP TEK GRVHTS ++VAILPQ E+++ + +DLRIDT
Sbjct: 185 GGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTK 244
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y M
Sbjct: 245 RASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEI 304
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R R QIGS RSE+IRTYNFPQ RVTDHR+ T H + M+G+ L D + +L
Sbjct: 305 NKRQNARKIQIGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSL 363
>UNIPROTKB|F1NW58 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 OMA:YSMKLEE
GeneTree:ENSGT00390000011879 EMBL:AADN02025387 EMBL:AADN02025388
IPI:IPI00593690 Ensembl:ENSGALT00000022140 Uniprot:F1NW58
Length = 367
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 127/298 (42%), Positives = 180/298 (60%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDAD 63
I LR K++E+ + L + E +D+ +A E+ +E P ++ D
Sbjct: 53 IQRLRDKERELQDTRELALQ-DESEDLRKLAEREIVSCEEEIAELKHQIVLLLIPSEETD 111
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
D ++EV AG GG+EA LF ++F MY RY+ K WKFE++ S++ G + A A+I+
Sbjct: 112 NSDLVMEVTAGVGGQEAMLFTSEIFDMYRRYAAYKKWKFEILEYFPSEIGGLRHAVASIA 171
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G+ Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++++ +DLRI+T R
Sbjct: 172 GLDAYKYMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEMELKINPKDLRIETKR 231
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHL 243
+ G+GGQH NTT+SAVR+ HIPTG+T Q ERSQ N Y ++ +
Sbjct: 232 ASGAGGQHVNTTDSAVRIVHIPTGVTSECQQERSQIRNKEKAMQMLCAKLYNIKLEEENK 291
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGIT-HHAISDMMEGENLDIFIDAL 300
R+ R QIG+ RSE+IRTYNFPQ R+TDHR+ + HH M+ E LD I L
Sbjct: 292 KRNSARKIQIGTKGRSEKIRTYNFPQDRITDHRISRSVHHTECFMLGEEMLDEMIKTL 349
>ZFIN|ZDB-GENE-030131-8198 [details] [associations]
symbol:mtrf1l "mitochondrial translational release
factor 1-like" species:7955 "Danio rerio" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA] [GO:0003747 "translation release factor
activity" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 ZFIN:ZDB-GENE-030131-8198 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
EMBL:CU651596 IPI:IPI00802409 Ensembl:ENSDART00000084094
Uniprot:F1QA94
Length = 339
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 128/292 (43%), Positives = 181/292 (61%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TE-ELCLAIDEEKRXXXXXXXXXXPKDD 61
I +L KQKE++ ++ L+ + D ++L++A TE E LA ++ R P+++
Sbjct: 27 IKKLEVKQKEMEDMQDLLKD--NDPELLELAETEKEAVLADIQDLRQKILSLLI--PEEE 82
Query: 62 ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
+D + +LEV AG GG+EA LF ++F+MY+ Y+ GW F+V+ S+L G + ASA+
Sbjct: 83 SDMSELVLEVSAGVGGQEAMLFTAEIFEMYQNYAAFNGWSFDVLEANASELGGVRHASAS 142
Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
+SG Y KLKFE+G+HRVQRVP TE GR HTS ++VAILPQ E+ + +DL+I+T
Sbjct: 143 VSGPLSYKKLKFEAGVHRVQRVPKTESKGRTHTSTMTVAILPQPTEISFTINPKDLKIET 202
Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRI 241
R+ G+GGQH NTT+SAVR+TH+PTG Q ERSQ N Y
Sbjct: 203 KRASGAGGQHVNTTDSAVRITHLPTGTVAECQQERSQIKNKDTAMKLLRAKLYSARLEEE 262
Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL 293
R + R QIG+ RSE+IRTYNF Q R+TDHR+G T H + ++GE L
Sbjct: 263 TSRRYQARKLQIGTRGRSEKIRTYNFQQDRITDHRIGKTVHDVHGFLQGEEL 314
>RGD|1598312 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 RGD:1598312 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0
HSSP:Q9X183 GeneTree:ENSGT00390000011879 OMA:GEAGGYK EMBL:BC097970
IPI:IPI00365406 RefSeq:NP_001020894.1 UniGene:Rn.205194
ProteinModelPortal:Q4V7E5 STRING:Q4V7E5 PRIDE:Q4V7E5
Ensembl:ENSRNOT00000025398 GeneID:361473 KEGG:rno:361473
UCSC:RGD:1598312 InParanoid:Q4V7E5 NextBio:676427
Genevestigator:Q4V7E5 Uniprot:Q4V7E5
Length = 373
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 128/295 (43%), Positives = 176/295 (59%)
Query: 7 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERD 66
L K++E+ +SL+++ E++D+ +A E+ L E P +D D D
Sbjct: 64 LNEKERELRDTESLLHD--ENEDLKKLAESEIALCQKEIAELKHRIISLLVPSEDMDGSD 121
Query: 67 CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
ILEV AG GG+EA LF ++F MY++Y+ K W FE + S+L G + ASA+I G
Sbjct: 122 LILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGPE 181
Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
Y +KFE G+HRVQRVP TE+ GR+HTS ++VAILPQ E+ + + +DLRIDT R+ G
Sbjct: 182 AYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILPQPTEIKLVINPKDLRIDTKRASG 241
Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRS 246
+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y M R
Sbjct: 242 AGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMRLEEETAKRY 301
Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R Q+G+ RSE+IRTYNFPQ RVTDHR+ + H + M+G+ L D I +L
Sbjct: 302 SARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDLIQSL 356
>UNIPROTKB|F1MCM1 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 IPI:IPI00714066 UniGene:Bt.20306
GeneTree:ENSGT00390000011879 OMA:VEIHAND EMBL:DAAA02027199
Ensembl:ENSBTAT00000012219 Uniprot:F1MCM1
Length = 380
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 125/295 (42%), Positives = 178/295 (60%)
Query: 7 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERD 66
L K++E+ + L+++ E++D+ +A E+ E + P ++ D+ D
Sbjct: 71 LSDKEQELQETQHLLHD--ENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKND 128
Query: 67 CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
ILEV AG GG+EA LF ++F MY++Y+ K W FE + S++ G + ASA+I G
Sbjct: 129 LILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSE 188
Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++ + +DLRIDT R+ G
Sbjct: 189 AYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASG 248
Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRS 246
+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y ++ R
Sbjct: 249 AGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRY 308
Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R QIG+ RSE+IRTYNFPQ RVTDHR+ + H + M+GE L D + +L
Sbjct: 309 NARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELVQSL 363
>UNIPROTKB|Q2KI15 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 EMBL:BC112806 IPI:IPI00714066 RefSeq:NP_001039843.1
UniGene:Bt.20306 ProteinModelPortal:Q2KI15 STRING:Q2KI15
PRIDE:Q2KI15 GeneID:534354 KEGG:bta:534354 CTD:54516 eggNOG:COG0216
HOGENOM:HOG000074815 HOVERGEN:HBG017071 InParanoid:Q2KI15 KO:K02835
OrthoDB:EOG49W2G0 NextBio:20876372 Uniprot:Q2KI15
Length = 380
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 125/295 (42%), Positives = 178/295 (60%)
Query: 7 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERD 66
L K++E+ + L+++ E++D+ +A E+ E + P ++ D+ D
Sbjct: 71 LSDKEQELQETQHLLHD--ENEDLRKLAENEITSCEKEIAQLKHQIILLLVPSEETDKND 128
Query: 67 CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
ILEV AG GG+EA LF ++F MY++Y+ K W FE + S++ G + ASA+I G
Sbjct: 129 LILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGSE 188
Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++ + +DLRIDT R+ G
Sbjct: 189 AYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTKRASG 248
Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRS 246
+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y ++ R
Sbjct: 249 AGGQHVNTTDSAVRIVHLPTGIVSECQQERSQLKNKEMAMKKLRAKLYSLQLEEETSKRY 308
Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R QIG+ RSE+IRTYNFPQ RVTDHR+ + H + M+GE L D + +L
Sbjct: 309 NARKIQIGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELVQSL 363
>UNIPROTKB|F1S7X5 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:GEAGGYK EMBL:CU633523 Ensembl:ENSSSCT00000004505 Uniprot:F1S7X5
Length = 380
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 126/299 (42%), Positives = 182/299 (60%)
Query: 4 ISELRT-KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDA 62
+++L T K++E+ + L+++ E +D+ +A E+ E + P ++A
Sbjct: 67 VAKLLTEKERELLETEHLLHD--ESEDLRKLAENEIISCQKEIAQLKHQIVLLLVPSEEA 124
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
DE D ILEV AG GG+EA LF ++F MY++Y+ K W FE++ S++ G + ASA+I
Sbjct: 125 DENDLILEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFEILEYFPSEIGGLRHASASI 184
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
G Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++ + +DLRIDT
Sbjct: 185 GGSEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIDTK 244
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y +
Sbjct: 245 RASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSLHLEEET 304
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R R Q+G+ RSE+IRTYNFPQ RVTDHR+ + + + M+GE L D + +L
Sbjct: 305 SKRYNARKVQVGTKGRSEKIRTYNFPQNRVTDHRINKSLYDLGTFMQGEYLLDELVQSL 363
>MGI|MGI:1918830 [details] [associations]
symbol:Mtrf1l "mitochondrial translational release factor
1-like" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 MGI:MGI:1918830 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 CTD:54516 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 OrthoDB:EOG49W2G0 HSSP:Q9X183
EMBL:AK036424 EMBL:AK078897 IPI:IPI00222491 RefSeq:NP_780583.1
UniGene:Mm.55082 ProteinModelPortal:Q8BJU9 SMR:Q8BJU9 STRING:Q8BJU9
PhosphoSite:Q8BJU9 PRIDE:Q8BJU9 Ensembl:ENSMUST00000019908
GeneID:108853 KEGG:mmu:108853 UCSC:uc007egi.1
GeneTree:ENSGT00390000011879 InParanoid:Q8BJU9 OMA:GEAGGYK
NextBio:361387 Bgee:Q8BJU9 Genevestigator:Q8BJU9 Uniprot:Q8BJU9
Length = 373
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 126/295 (42%), Positives = 176/295 (59%)
Query: 7 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERD 66
L K++E+ +SL+++ E++D+ +A E+ L + P ++ D D
Sbjct: 64 LSEKERELRDTESLLHD--ENEDLKKLAESEIALCQKQITELKHQIISLLVPSEEMDGSD 121
Query: 67 CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
ILEV AG GG+EA LF ++F MY++Y+ K W FE + S+L G + ASA++ G
Sbjct: 122 LILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASVGGPE 181
Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+ + + +DLRIDT R+ G
Sbjct: 182 AYRHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEIKLVINPKDLRIDTKRASG 241
Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRS 246
+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y M R
Sbjct: 242 AGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKNRELAMKKLRARLYSMHLEEETAKRY 301
Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R Q+G+ RSE+IRTYNFPQ RVTDHR+ + H + M+G+ L D I +L
Sbjct: 302 NARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLESFMQGDCLLDDMIQSL 356
>UNIPROTKB|P66016 [details] [associations]
symbol:prfA "Peptide chain release factor 1" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_00093 InterPro:IPR000352 InterPro:IPR004373
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842576 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 ProtClustDB:PRK00591
TIGRFAMs:TIGR00019 PIR:G70773 RefSeq:NP_215815.1 RefSeq:NP_335786.1
RefSeq:YP_006514676.1 ProteinModelPortal:P66016 SMR:P66016
PRIDE:P66016 EnsemblBacteria:EBMYCT00000003633
EnsemblBacteria:EBMYCT00000071350 GeneID:13319881 GeneID:886948
GeneID:924722 KEGG:mtc:MT1338 KEGG:mtu:Rv1299 KEGG:mtv:RVBD_1299
PATRIC:18124710 TubercuList:Rv1299 OMA:VEIHAND Uniprot:P66016
Length = 357
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 119/249 (47%), Positives = 163/249 (65%)
Query: 58 PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
P+D D D +LEV++G GGEE++LFA D+ +MY RY+++ GW V+ T SDL GYK+
Sbjct: 98 PRDPHDADDIVLEVKSGEGGEESALFAADLARMYIRYAERHGWAVTVLDETTSDLGGYKD 157
Query: 118 ASAAISGV-----GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVR 171
A+ AI+ GV+ ++KFE G+HRVQRVP+TE GRVHTSA V + P+ +EV V+
Sbjct: 158 ATLAIASKADTPDGVWSRMKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVGQVQ 217
Query: 172 LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXX 231
+ DLRID +RS G GGQ NTT+SAVR+TH+PTG+ ++ Q+ERSQ N
Sbjct: 218 IDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKTRALQVLAA 277
Query: 232 XXYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGE 291
M + S R+ QI + DRSERIRTYNFP+ R+TDHR+G H + +++G+
Sbjct: 278 RLQAMAEEQALADASADRASQIRTVDRSERIRTYNFPENRITDHRIGYKSHNLDQVLDGD 337
Query: 292 NLDIFIDAL 300
LD DAL
Sbjct: 338 -LDALFDAL 345
>UNIPROTKB|E2QTM1 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
Ensembl:ENSCAFT00000000841 Uniprot:E2QTM1
Length = 381
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 125/299 (41%), Positives = 176/299 (58%)
Query: 7 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXX----PKDDA 62
L K++E+ + L+ + E++D+ +A E+ KR P ++
Sbjct: 71 LSEKERELQETEQLLRD--ENEDLRKLAENEMT---SSSKRGVIFLYLQIILLLVPSEET 125
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
D+ D ILEV AG GG+EA LF ++F MY++Y+ K W FE + S++ G + ASA+I
Sbjct: 126 DKNDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASI 185
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
G+ Y +KFE G+HRVQRVP TEK GR+HTS ++VAILPQ E+++ + +DLRI T
Sbjct: 186 GGLEAYKHMKFEGGVHRVQRVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIHTK 245
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N Y M
Sbjct: 246 RASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEET 305
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
R R Q+G+ RSE+IRTYNFPQ RVTDHR+ + H + M+GE L D + +L
Sbjct: 306 SKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELVQSL 364
>MGI|MGI:2384815 [details] [associations]
symbol:Mtrf1 "mitochondrial translational release factor 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003747 "translation release factor activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006415 "translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
MGI:MGI:2384815 GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP OrthoDB:EOG48KRBQ
EMBL:AK043981 EMBL:BC028898 IPI:IPI00169629 RefSeq:NP_666072.3
UniGene:Mm.35306 ProteinModelPortal:Q8K126 SMR:Q8K126 STRING:Q8K126
PhosphoSite:Q8K126 PRIDE:Q8K126 Ensembl:ENSMUST00000022600
GeneID:211253 KEGG:mmu:211253 UCSC:uc007usw.1 InParanoid:Q8K126
NextBio:373184 Bgee:Q8K126 CleanEx:MM_MTRF1 Genevestigator:Q8K126
GermOnline:ENSMUSG00000022022 Uniprot:Q8K126
Length = 446
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 129/316 (40%), Positives = 186/316 (58%)
Query: 6 ELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPKDDA 62
E++ ++ I+ L+SL + ++K + ++ +EE + ID++ R PK+
Sbjct: 123 EIQEAEQAIEELESLCKSLNKQDEKQLQELVSEERQI-IDQKIHRLYSELLERLVPKEKY 181
Query: 63 DERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D D ILEV +G TGG+ F ++F MY+ YS K WKFE++ T +D G A+A
Sbjct: 182 DWSDVILEVTSGRTTGGDICQQFTREIFDMYQNYSYYKHWKFELLNYTPADYGGLHHAAA 241
Query: 121 AISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
ISG VY LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV++ +DL
Sbjct: 242 RISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPKDL 301
Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME 237
R+DT+R+ G+GGQH NTT+SAVR+ HIPTG+ + Q ERSQ N Y+
Sbjct: 302 RVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQLKNKEIALRVLRARLYQQI 361
Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGEN-LDIF 296
+ + R Q+G+ +SERIRTYNF Q RVTDHR+ I + + GE LD
Sbjct: 362 IEKDRCQQQNARKLQVGTRAQSERIRTYNFTQDRVTDHRIAYEVRDIKEFLRGEKCLDQL 421
Query: 297 IDALLLQQEMDAIASF 312
I+ LL + +AI+ F
Sbjct: 422 IERLLQSADEEAISEF 437
>UNIPROTKB|E2RAT2 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720
GO:GO:0005739 Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:AAEX03013173
RefSeq:XP_848713.1 ProteinModelPortal:E2RAT2
Ensembl:ENSCAFT00000007724 GeneID:485465 KEGG:cfa:485465
NextBio:20859471 Uniprot:E2RAT2
Length = 444
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 126/318 (39%), Positives = 181/318 (56%)
Query: 3 LISELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
+ E++ ++ I+ L S+ S ++K + ++A EE ++ PK+
Sbjct: 118 IYQEIQEAEQAIEELDSMCKSLSKQDEKQLQELALEERQTIAEKINVLYSELFQSLVPKE 177
Query: 61 DADERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
D+ D I+EV +G TGG+ F ++F MY+ YS K WKFE++ T +D G A
Sbjct: 178 KYDKNDVIIEVTSGRTTGGDICQQFTREIFDMYQNYSSYKNWKFELLNYTPADYGGLHHA 237
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
+A ISG VY LK+E G+HRVQR+P L+ + R+HT +SV +LPQ DEVDV++ +
Sbjct: 238 AARISGDNVYKHLKYEGGVHRVQRIPEVGLSARMQRIHTGTMSVIVLPQPDEVDVKVDPK 297
Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYE 235
DLRIDT+R+ G+GGQH NTT+SAVR+ HIPTG+ + Q ERSQ N Y+
Sbjct: 298 DLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQ 357
Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGEN-LD 294
+ + R Q+G+ +SERIRTYNF Q RVTDHR+ I + + GE LD
Sbjct: 358 QIIEKDKCQQQSTRKLQVGTRAQSERIRTYNFTQDRVTDHRIAYEVRGIKEFLCGEKCLD 417
Query: 295 IFIDALLLQQEMDAIASF 312
I LL + +AI F
Sbjct: 418 QLIQRLLHSADEEAITEF 435
>UNIPROTKB|F1RJ87 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 KO:K02835
GeneTree:ENSGT00390000011879 CTD:9617 OMA:VWLFRHP EMBL:CU062515
RefSeq:NP_001230509.1 UniGene:Ssc.41357 Ensembl:ENSSSCT00000010343
GeneID:100155739 KEGG:ssc:100155739 Uniprot:F1RJ87
Length = 446
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 125/318 (39%), Positives = 181/318 (56%)
Query: 3 LISELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
+ E++ ++ I+ L+S+ + ++K + ++A EE + PK+
Sbjct: 120 IYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEEKRTIAQKINMLYHELFQSLVPKE 179
Query: 61 DADERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
D+ D ILEV +G TGG+ F ++F MY+ YS K W FE++ T +D G A
Sbjct: 180 KYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWTFELLNYTPADYGGLHHA 239
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
+A ISG VY LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV++ +
Sbjct: 240 AARISGANVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKVDPK 299
Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYE 235
DLRIDT+R+ G+GGQH NTT+SAVR+ H+PTG+ + Q ERSQ N Y+
Sbjct: 300 DLRIDTFRAKGAGGQHVNTTDSAVRLVHVPTGLVVECQQERSQIKNKEIALRVLRARLYQ 359
Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGEN-LD 294
+ + R Q+G+ +SERIRTYNF Q RVTDHR+ I + + GE LD
Sbjct: 360 QIIEKEKCQQQSARKLQVGTRAQSERIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLD 419
Query: 295 IFIDALLLQQEMDAIASF 312
+ I LL + +AI F
Sbjct: 420 LLIQRLLQTADEEAITEF 437
>UNIPROTKB|Q3MHI7 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9913 "Bos taurus" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016149 "translation release
factor activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815
HOVERGEN:HBG017071 KO:K02835 GeneTree:ENSGT00390000011879
EMBL:BC105224 IPI:IPI00698094 RefSeq:NP_001030185.1
UniGene:Bt.37767 HSSP:P0A7I0 ProteinModelPortal:Q3MHI7
STRING:Q3MHI7 PRIDE:Q3MHI7 Ensembl:ENSBTAT00000016261 GeneID:504754
KEGG:bta:504754 CTD:9617 InParanoid:Q3MHI7 OMA:VWLFRHP
OrthoDB:EOG48KRBQ NextBio:20866812 Uniprot:Q3MHI7
Length = 447
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 125/318 (39%), Positives = 180/318 (56%)
Query: 3 LISELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
+ E++ ++ I+ L+S+ + ++K + ++A EE + PK+
Sbjct: 121 IYKEIQEAEQAIEELESMCKSLNKQDEKQLQELALEERQTIAQKINMLYSELFQSLLPKE 180
Query: 61 DADERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
D+ D ILEV +G TGG+ F ++F MY+ YS K W+FE++ T +D G A
Sbjct: 181 KYDKNDVILEVTSGRTTGGDICQQFTREIFDMYQNYSSYKHWRFELLNYTPADYGGLHHA 240
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
+A ISG VY LK+E GIHRVQR+P L+ + R+HT +SV +LP DEVDV++ +
Sbjct: 241 AARISGDNVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPHPDEVDVKVDPK 300
Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYE 235
DLRIDT+R+ G+GGQH NTT+SAVR+ HIPTG+ + Q ERSQ N Y+
Sbjct: 301 DLRIDTFRAKGAGGQHVNTTDSAVRLVHIPTGLVVECQQERSQIKNKEIALRVLRARLYQ 360
Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGEN-LD 294
+ + R Q+G+ +SERIRTYNF Q RVTDHR+ I + + GE LD
Sbjct: 361 QIIEKDKCQQRSARKLQVGTRAQSERIRTYNFTQDRVTDHRIAYEVRNIKEFLCGEKCLD 420
Query: 295 IFIDALLLQQEMDAIASF 312
I LL + +AI F
Sbjct: 421 QLIQRLLQSADEEAITEF 438
>UNIPROTKB|O75570 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=TAS] [GO:0006449 "regulation of
translational termination" evidence=TAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0003747 GO:GO:0006449 GO:GO:0016149 EMBL:AL354696
eggNOG:COG0216 HOGENOM:HOG000074815 HOVERGEN:HBG017071 KO:K02835
CTD:9617 OrthoDB:EOG48KRBQ EMBL:AF072934 EMBL:BC042196
IPI:IPI00026157 RefSeq:NP_004285.2 UniGene:Hs.382176
ProteinModelPortal:O75570 SMR:O75570 IntAct:O75570 STRING:O75570
PhosphoSite:O75570 PRIDE:O75570 Ensembl:ENST00000379477
Ensembl:ENST00000379480 Ensembl:ENST00000452359 GeneID:9617
KEGG:hsa:9617 UCSC:uc001uxx.3 GeneCards:GC13M041790 HGNC:HGNC:7469
HPA:HPA043316 MIM:604601 neXtProt:NX_O75570 PharmGKB:PA31273
InParanoid:O75570 PhylomeDB:O75570 GenomeRNAi:9617 NextBio:36079
ArrayExpress:O75570 Bgee:O75570 CleanEx:HS_MTRF1
Genevestigator:O75570 GermOnline:ENSG00000120662 Uniprot:O75570
Length = 445
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 128/317 (40%), Positives = 184/317 (58%)
Query: 3 LISELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPK 59
+ E++ ++ I+ L+S+ + ++K + ++A EE ID++ PK
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEER-QTIDQKINMLYNELFQSLVPK 177
Query: 60 DDADERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
+ D+ D ILEV AG TGG+ F ++F MY+ YS K W+FE++ T +D G
Sbjct: 178 EKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHH 237
Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
A+A ISG GVY LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV+L
Sbjct: 238 AAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDP 297
Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXY 234
+DLRIDT+R+ G+GGQH N T+SAVR+ HIPTG+ + Q ERSQ N Y
Sbjct: 298 KDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLY 357
Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMM-EGENL 293
+ + + R Q+G+ +SERIRTYNF Q RV+DHR+ I + + G+ L
Sbjct: 358 QQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKGL 417
Query: 294 DIFIDALLLQQEMDAIA 310
D I LL + +AIA
Sbjct: 418 DQLIQRLLQSADEEAIA 434
>TAIR|locus:2099137 [details] [associations]
symbol:APG3 "AT3G62910" species:3702 "Arabidopsis
thaliana" [GO:0003747 "translation release factor activity"
evidence=IGI;ISS] [GO:0006415 "translational termination"
evidence=IGI;ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009658 "chloroplast organization" evidence=IMP;NAS]
[GO:0010027 "thylakoid membrane organization" evidence=RCA;IMP]
[GO:0032544 "plastid translation" evidence=IGI] [GO:0006783 "heme
biosynthetic process" evidence=RCA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0042793 "transcription from plastid promoter"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] HAMAP:MF_00093 InterPro:IPR000352
InterPro:IPR004373 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:3.30.160.20
GO:GO:0009658 GO:GO:0010027 GO:GO:0003747 GO:GO:0032544
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
TIGRFAMs:TIGR00019 OMA:SVMLEIR HSSP:P07012 EMBL:AY090253
EMBL:AY125535 EMBL:AB109893 IPI:IPI00529197 RefSeq:NP_191850.2
UniGene:At.28015 ProteinModelPortal:Q8RX79 SMR:Q8RX79 STRING:Q8RX79
PaxDb:Q8RX79 PRIDE:Q8RX79 EnsemblPlants:AT3G62910.1 GeneID:825466
KEGG:ath:AT3G62910 TAIR:At3g62910 InParanoid:Q8RX79
PhylomeDB:Q8RX79 ProtClustDB:CLSN2690621 Genevestigator:Q8RX79
Uniprot:Q8RX79
Length = 422
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 120/300 (40%), Positives = 183/300 (61%)
Query: 11 QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILE 70
+K++ K L E +D+DM +M E+ E + P D D R+ +LE
Sbjct: 111 EKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQLKVLLLPSDPLDARNILLE 170
Query: 71 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
VRAGTGG+EA+++ D+ +MY+RYS++ WKF +V +E++ GYK I G VY K
Sbjct: 171 VRAGTGGDEAAIWTGDLVRMYQRYSERSSWKFSMVSCSEAEHGGYKTCVMEIKGNRVYSK 230
Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
LK+ESG+HRVQRVP TE GRVHTS +VAI+P+ADEV+V + +D+ + + RSGG+GGQ
Sbjct: 231 LKYESGVHRVQRVPQTETQGRVHTSTATVAIMPEADEVEVVIDPKDIELTSARSGGAGGQ 290
Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRS 250
+ N +A+ + H P+G+ I +ER+Q N YE+ ++ + K+R+
Sbjct: 291 NVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRAKLYEI---KVREQQEKIRN 347
Query: 251 E---QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD-IFIDALLLQQEM 306
E Q+G+G RSE+IRTYN+ RVTDHR+ + + A++ ++G D + A L Q+E+
Sbjct: 348 ERKSQVGTGARSEKIRTYNYKDSRVTDHRLKM-NFALTTFLDGALEDAVQACAALEQKEL 406
>UNIPROTKB|E1BXF8 [details] [associations]
symbol:MTRF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016149 "translation release factor activity, codon
specific" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005739
Gene3D:3.30.160.20 GO:GO:0016149 GeneTree:ENSGT00390000011879
OMA:VWLFRHP EMBL:AADN02005497 IPI:IPI00591431
Ensembl:ENSGALT00000027399 Uniprot:E1BXF8
Length = 417
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 122/316 (38%), Positives = 183/316 (57%)
Query: 6 ELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEEKRXX-XXXXXXXXPKDDA 62
E+R + E+ L+++ E ++K +L++A EE +D++ PK+
Sbjct: 91 EIREAESELQELETMCRELDSRDEKQLLELALEEK-ETLDKKINTLCRKLFQLLVPKEKY 149
Query: 63 DERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D+ ILEV AG TGG+ F ++F+MY+ Y+ K W F+++ +++ G A+A
Sbjct: 150 DKSHVILEVTAGRTTGGDICQQFTKEMFEMYQNYADYKCWTFDILNYVPAEIGGLHHAAA 209
Query: 121 AISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
ISG VY LK+E G HRVQR+P L+ + R+HT +SV +LPQ +EVDV++ +DL
Sbjct: 210 HISGDDVYRHLKYEGGTHRVQRIPETGLSSRMQRIHTGTMSVIVLPQPEEVDVKVDPKDL 269
Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME 237
RIDT+R+ G+GGQH N T+SAVR+ H+PTG+ + Q ERSQ MN Y+
Sbjct: 270 RIDTFRAKGAGGQHVNKTDSAVRIVHLPTGVVVECQQERSQQMNKEIALRTLRAKLYQQI 329
Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEG-ENLDIF 296
+ R Q+G+ +SERIRTYNF Q RVTDHR+ I +++ G E LD
Sbjct: 330 IEKQLSQEQSARKLQLGTRAQSERIRTYNFTQDRVTDHRISYDARNIKEILSGKEELDKL 389
Query: 297 IDALLLQQEMDAIASF 312
I+ LL EM+A+ +
Sbjct: 390 INRLLEFAEMEALTEY 405
>UNIPROTKB|B4DG01 [details] [associations]
symbol:MTRF1 "Peptide chain release factor 1,
mitochondrial" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
EMBL:AL354696 HOGENOM:HOG000074815 HOVERGEN:HBG017071 OMA:VWLFRHP
UniGene:Hs.382176 HGNC:HGNC:7469 EMBL:AK294343 IPI:IPI00909024
SMR:B4DG01 STRING:B4DG01 Ensembl:ENST00000430347 UCSC:uc010tff.2
Uniprot:B4DG01
Length = 468
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 118/283 (41%), Positives = 169/283 (59%)
Query: 3 LISELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPK 59
+ E++ ++ I+ L+S+ + ++K + ++A EE ID++ PK
Sbjct: 132 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEER-QTIDQKINMLYNELFQSLVPK 190
Query: 60 DDADERDCILEVRAG--TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
+ D+ D ILEV AG TGG+ F ++F MY+ YS K W+FE++ T +D G
Sbjct: 191 EKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYGGLHH 250
Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVP---LTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
A+A ISG GVY LK+E GIHRVQR+P L+ + R+HT +SV +LPQ DEVDV+L
Sbjct: 251 AAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLDP 310
Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXY 234
+DLRIDT+R+ G+GGQH N T+SAVR+ HIPTG+ + Q ERSQ N Y
Sbjct: 311 KDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARLY 370
Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRV 277
+ + + R Q+G+ +SERIRTYNF Q RV+DHR+
Sbjct: 371 QQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRI 413
>FB|FBgn0032486 [details] [associations]
symbol:CG5705 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=ISS]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:AE014134 Gene3D:3.30.160.20 GO:GO:0016149 eggNOG:COG0216
KO:K02835 GeneTree:ENSGT00390000011879 HSSP:P07012 EMBL:AY061245
RefSeq:NP_609617.1 UniGene:Dm.3674 SMR:Q9VK20 IntAct:Q9VK20
MINT:MINT-821247 STRING:Q9VK20 EnsemblMetazoa:FBtr0080444
GeneID:34720 KEGG:dme:Dmel_CG5705 UCSC:CG5705-RA
FlyBase:FBgn0032486 InParanoid:Q9VK20 OMA:AEKDEDM OrthoDB:EOG46WWQX
GenomeRNAi:34720 NextBio:789875 Uniprot:Q9VK20
Length = 392
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 110/309 (35%), Positives = 178/309 (57%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDE-EKRXXXXXXXXXXPKDDA 62
+ + R ++ I K + E +D+DM ++ EE + +D K+ DD
Sbjct: 69 LEQRRVLERHITSAKDM--EAEKDEDMRELMREENEVYVDLLGKQDQALLQELLTLSDDE 126
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
+ I + AG GG+EA LFA ++++MY Y + GW++E +D+ G + AS +
Sbjct: 127 EYPALIFGLNAGAGGQEAMLFAQELYEMYTGYFEHMGWEWEEFASEGTDIGGLRHASLMV 186
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
SG + L++E+G+HRVQRVP TEKSGR+HTS S+ ++P+ ++ V + +DL+I+T
Sbjct: 187 SGEDAFRWLRYEAGVHRVQRVPATEKSGRMHTSTASITVIPRPADIQVHIAEKDLKIETK 246
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
R+ G+GGQH NTT+SAVR+ H+PTG+ + Q ERSQ N + + +
Sbjct: 247 RASGAGGQHVNTTDSAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVE 306
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRV-GITHHAISDMMEG-ENLDIFIDAL 300
S+ + Q GS +R+E+IRTYNF Q R+TDHR+ G T H ++ ++G + L I+ L
Sbjct: 307 ASKMATKKAQQGSLNRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKL 366
Query: 301 LLQQEMDAI 309
L+ + +
Sbjct: 367 QLEHRRERL 375
>POMBASE|SPAC2F7.17 [details] [associations]
symbol:SPAC2F7.17 "mitochondrial peptide chain release
factor (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=NAS] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 PomBase:SPAC2F7.17 GO:GO:0005739
EMBL:CU329670 Gene3D:3.30.160.20 GO:GO:0032543 GO:GO:0003747
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
PIR:S58161 RefSeq:NP_592987.1 ProteinModelPortal:Q09691
STRING:Q09691 EnsemblFungi:SPAC2F7.17.1 GeneID:2541478
KEGG:spo:SPAC2F7.17 OMA:QEANSIL OrthoDB:EOG4JWZP5 NextBio:20802577
Uniprot:Q09691
Length = 396
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 115/301 (38%), Positives = 171/301 (56%)
Query: 5 SELRTKQKEIDGLKSLIYECSE-DKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDAD 63
S+ ++ ++I LK + E E D ++ MA E+ ++ + P+ D+
Sbjct: 83 SKFKSLSEQISDLKQM--EAQESDAEVKMMAVTEINEISNKIPKSIEDLENTLLPQADSY 140
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTE-SDLRGYKEASAAI 122
++E+R G GG EA++FA ++ +MY +Y+ KGW + + + L EA +I
Sbjct: 141 ALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFISKSAVQGLEAITEAIFSI 200
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA--DEVDVRLRNEDLRID 180
G G YG L E G+HRVQR P TE GRVHTS SV +LPQ DE + +++I+
Sbjct: 201 EGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLPQVSNDESSSLYDSSEVKIE 260
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSR 240
RS G+GGQH N T SAVR+THIPTG+T+S+QD RSQH N + ++
Sbjct: 261 VMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQNKEKAFLVLNSRLAALNAAK 320
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGEN-LDIFIDA 299
+ + R Q+ S DRSE++RTYNF Q RVTDHR+G++ H +S M+GE D F++
Sbjct: 321 ENEAERLKRKNQVTSSDRSEKLRTYNFNQNRVTDHRIGLSMHDLSTFMQGEEKFDEFLEK 380
Query: 300 L 300
+
Sbjct: 381 I 381
>CGD|CAL0003702 [details] [associations]
symbol:orf19.1303 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003747 "translation release
factor activity" evidence=IEA] [GO:0070126 "mitochondrial
translational termination" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 CGD:CAL0003702 GO:GO:0005737
Gene3D:3.30.160.20 GO:GO:0016149 EMBL:AACQ01000138
HOGENOM:HOG000074815 KO:K02835 RefSeq:XP_709944.1
ProteinModelPortal:Q59TR5 STRING:Q59TR5 GeneID:3645356
KEGG:cal:CaO19.1303 Uniprot:Q59TR5
Length = 394
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 110/285 (38%), Positives = 167/285 (58%)
Query: 23 ECSEDKDMLDMATEEL-CLAIDEEKRXXXXXXXXXXPKDDADERDCILEVRAGTGGEEAS 81
E ++D D+ A EEL + I + ++ P ++ CI+E+R G GG EAS
Sbjct: 105 EITDDPDLYKEAQEELKSIVIPQIEKLVSELRVKLRPPVKYADKGCIIELRPGVGGNEAS 164
Query: 82 LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 141
LF D+ MY ++ + WK++++ ++ EA +I +G Y ++ ESG+HRVQ
Sbjct: 165 LFTGDLLNMYMNFASEMNWKYKIISEGKNSSGFINEAILSIDTLGSYDIMRHESGVHRVQ 224
Query: 142 RVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNED-------LRIDTYRSGGSGGQHAN 193
R+P TE GRVHTS +V +LP+ E + L++++ +RIDT R+GG GGQH N
Sbjct: 225 RIPETETKGRVHTSTAAVVVLPKLSEGNESSLKDDERVFAPGEVRIDTMRAGGKGGQHVN 284
Query: 194 TTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQI 253
TT+SAVR+ HIPTGM + QDERSQ +N + E+ L + KLR++Q+
Sbjct: 285 TTDSAVRLLHIPTGMIVIQQDERSQPLNKAKAFAILRSRLAQKEQEEEMLKQKKLRTDQV 344
Query: 254 GSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
S DRS++I+TYN+ + RVTDHR+ + H + ++EG L ID
Sbjct: 345 SSTDRSDKIKTYNYKENRVTDHRINYSMHDLEGVLEGRKLGQLID 389
>SGD|S000003111 [details] [associations]
symbol:MRF1 "Mitochondrial translation release factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA;IMP] [GO:0070126 "mitochondrial translational
termination" evidence=IGI;IMP] [GO:0006415 "translational
termination" evidence=IEA;IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0032543 "mitochondrial translation" evidence=IMP]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 SGD:S000003111 InterPro:IPR014720
GO:GO:0005739 EMBL:BK006941 Gene3D:3.30.160.20 GO:GO:0003747
EMBL:X99960 GO:GO:0016149 RefSeq:NP_011376.3 GeneID:852738
KEGG:sce:YGL139W EMBL:X60381 GO:GO:0070126 eggNOG:COG0216
HOGENOM:HOG000074815 KO:K02835 GeneTree:ENSGT00390000011879
OrthoDB:EOG4JWZP5 EMBL:Z72665 PIR:S28602 RefSeq:NP_011372.3
ProteinModelPortal:P30775 SMR:P30775 DIP:DIP-2626N IntAct:P30775
MINT:MINT-427494 STRING:P30775 PaxDb:P30775 EnsemblFungi:YGL143C
GeneID:852734 KEGG:sce:YGL143C CYGD:YGL143c OMA:PPHPFAD
NextBio:972135 Genevestigator:P30775 GermOnline:YGL143C
Uniprot:P30775
Length = 413
Score = 526 (190.2 bits), Expect = 1.3e-50, P = 1.3e-50
Identities = 112/299 (37%), Positives = 166/299 (55%)
Query: 11 QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADERDCILE 70
+++++ LKSL D + A +E + + + P ++ +LE
Sbjct: 99 KEKLNELKSLQEMIVSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLE 158
Query: 71 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDL-RGYKEASAAISGVGVYG 129
+R G GG EA +F ++ MY Y+ + WK+ ++ E++ G +A +I G Y
Sbjct: 159 LRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYD 218
Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQ-ADE----VDVRLRN---EDLRIDT 181
+L+FE+G+HRVQR+P TE GR HTS +V +LPQ DE +D R ++R+D
Sbjct: 219 RLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDI 278
Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRI 241
R+ G GGQH NTT+SAVR+THIP+G+ +S+QDERSQH N E ER
Sbjct: 279 MRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEK 338
Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
K R Q+ S +RS++IRTYNFPQ R+TDHR G T + ++ GE LD I+A+
Sbjct: 339 EEKERKARKSQVSSTNRSDKIRTYNFPQNRITDHRCGFTLLDLPGVLSGERLDEVIEAM 397
>UNIPROTKB|F6V8L3 [details] [associations]
symbol:MTRF1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
GO:GO:0016149 GeneTree:ENSGT00390000011879
Ensembl:ENSCAFT00000000841 EMBL:AAEX03000279 OMA:DCTISIS
Uniprot:F6V8L3
Length = 238
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 102/220 (46%), Positives = 138/220 (62%)
Query: 82 LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 141
LF ++F MY++Y+ K W FE + S++ G + ASA+I G+ Y +KFE G+HRVQ
Sbjct: 2 LFTSEMFDMYQQYAAFKRWHFETLEYFPSEIGGLRHASASIGGLEAYKHMKFEGGVHRVQ 61
Query: 142 RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
RVP TEK GR+HTS ++VAILPQ E+++ + +DLRI T R+ G+GGQH NTT+SAVR+
Sbjct: 62 RVPKTEKQGRIHTSTMTVAILPQPTEINLVINPKDLRIHTKRASGAGGQHVNTTDSAVRI 121
Query: 202 THIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLRSEQIGSGDRSER 261
H+PTG+ Q ERSQ N Y M R R Q+G+ RSE+
Sbjct: 122 VHLPTGVVSECQQERSQLKNREMAMKKLRAKLYSMYLEEETSKRYSARKIQVGTKGRSEK 181
Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENL-DIFIDAL 300
IRTYNFPQ RVTDHR+ + H + M+GE L D + +L
Sbjct: 182 IRTYNFPQNRVTDHRINKSLHDLETFMQGEYLLDELVQSL 221
>TIGR_CMR|CHY_0163 [details] [associations]
symbol:CHY_0163 "peptide chain release factor 2,
programmed frameshift" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0003747 "translation release factor
activity" evidence=ISS] [GO:0006415 "translational termination"
evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR Gene3D:3.30.160.20
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_359035.1 ProteinModelPortal:Q3AFP9 STRING:Q3AFP9
GeneID:3727359 KEGG:chy:CHY_0163 PATRIC:21273511 Uniprot:Q3AFP9
Length = 371
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 109/299 (36%), Positives = 169/299 (56%)
Query: 6 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADER 65
EL Q+E+ L L+ E E+ + L + ++ + E+ P D +
Sbjct: 70 ELLKAQEELTVLLQLLEE--EENEELAVEAQDKAKKLMEKLHRMEIELLLSGPYD---KN 124
Query: 66 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
I+ + AG GG EA + +++MY R+++ KG+K E++ + G K + ++ G
Sbjct: 125 SAIVSLHAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFSVEGF 184
Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQ-ADEV-DVRLRNEDLRIDTYR 183
G YG LK E G+HR+ R+ + SGR HTS SV +LP+ A+++ ++ L+ E+L+I+T+R
Sbjct: 185 GAYGYLKAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKIETFR 244
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHL 243
SGG+GGQH N T SAVR+TH+PTG+T+ Q+ERSQ MN ++E +
Sbjct: 245 SGGAGGQHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMKKKEE 304
Query: 244 SRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
+KLR EQ S+ IRTY F P V DHR G+ + +M+GE +DIFI+A L
Sbjct: 305 EMAKLRGEQKEIAWGSQ-IRTYVFHPYSLVKDHRTGVEVGDVQGVMDGE-IDIFIEAYL 361
>TIGR_CMR|GSU_2278 [details] [associations]
symbol:GSU_2278 "peptide chain release factor 2,
programmed frameshift" species:243231 "Geobacter sulfurreducens
PCA" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:NP_953327.1
ProteinModelPortal:Q74AS3 SMR:Q74AS3 GeneID:2686956
KEGG:gsu:GSU2278 PATRIC:22027411 ProtClustDB:CLSK828793
Uniprot:Q74AS3
Length = 372
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 106/299 (35%), Positives = 159/299 (53%)
Query: 12 KEIDGLKSLIYECSEDKDMLDMAT-EELCLAIDEEKRXXXXXXXXXXPKDDADERDCILE 70
++ D ++ LI E E+ D AT +E+ D +R D+ C +
Sbjct: 73 RQADDIRVLI-ELGEEAQ--DEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVS 129
Query: 71 VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
+ AG GG EA +A + +MY RY ++KGWK E+ D G K A+ + G YG
Sbjct: 130 INAGAGGTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGY 189
Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA-DEVDVRLRNEDLRIDTYRSGGSGG 189
LK E+GIHR+ R+ + + R HTS SV + P+ D++++++ DLR+DTYRS G+GG
Sbjct: 190 LKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDDIEIKIAESDLRVDTYRSSGAGG 249
Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKLR 249
QH NTT+SAVR+TH+PTG+ ++ Q ERSQH+N YE E + S+L
Sbjct: 250 QHVNTTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQASELA 309
Query: 250 SEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
E+ G S+ IR+Y P V D R G+ +++G L+ F+ A L+ D
Sbjct: 310 GEKKDIGWGSQ-IRSYVLHPYKMVKDLRTGVESGNPDAVLDGA-LEDFVVAFLMGVRRD 366
>WB|WBGene00020993 [details] [associations]
symbol:W03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0003747 "translation release factor activity" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] InterPro:IPR000352
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005739 Gene3D:3.30.160.20
GO:GO:0016149 eggNOG:COG0216 HOGENOM:HOG000074815 KO:K02835
GeneTree:ENSGT00390000011879 EMBL:FO080652 PIR:T15102
RefSeq:NP_500737.1 ProteinModelPortal:O44568 SMR:O44568
STRING:O44568 PaxDb:O44568 EnsemblMetazoa:W03F8.3.1
EnsemblMetazoa:W03F8.3.2 GeneID:177294 KEGG:cel:CELE_W03F8.3
UCSC:W03F8.3 CTD:177294 WormBase:W03F8.3 InParanoid:O44568
OMA:QCQAGNA NextBio:896154 Uniprot:O44568
Length = 389
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 98/302 (32%), Positives = 168/302 (55%)
Query: 11 QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPKDDADERD-CI 68
+ E+ L+++I + E ++M +A ++ +I+E + P ++ D C
Sbjct: 81 RSELSQLRTIINDPKETEEMRKLAEVDV-ESIEENLETELQELAVKIVPLNNLDVLSKCQ 139
Query: 69 LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 128
+E+ G GG+EA LF ++ MY++ + WK++ + V L G + A A+SG VY
Sbjct: 140 IELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPLQVDNVPLGGVRSALIAVSGEKVY 199
Query: 129 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 188
K++FE+G+HRVQRVP+ + R+HTS S+++LP+ +EV V + ++ ++I+ R+ G G
Sbjct: 200 AKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSVVVPSDSVKIEAMRASGPG 257
Query: 189 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIHLSRSKL 248
GQ+ N ++AVR+TH TG+ + DER QH+N + + +
Sbjct: 258 GQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAYKRLAAILMQKQVDAMLEKIVSK 317
Query: 249 RSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMME-GENLDIFIDALLLQQEMD 307
R Q+GS R+E+IRTYNF RVTDHR+ ++ +++ + GE L I+ L Q D
Sbjct: 318 RKLQVGSKARAEKIRTYNFQHDRVTDHRIQMSITGVAEFLSAGETLQTMIERLQEQHLED 377
Query: 308 AI 309
+
Sbjct: 378 RL 379
>UNIPROTKB|P07012 [details] [associations]
symbol:prfB species:83333 "Escherichia coli K-12"
[GO:0015858 "nucleoside transport" evidence=IMP] [GO:0015864
"pyrimidine nucleoside transport" evidence=IMP] [GO:0015862
"uridine transport" evidence=IMP] [GO:0006412 "translation"
evidence=IEA] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA;IDA] [GO:0006415 "translational
termination" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR Gene3D:3.30.160.20 EMBL:U28375
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 EMBL:M11520 EMBL:J03795 PIR:C65073
RefSeq:NP_417367.1 RefSeq:YP_491092.1 PDB:1GQE PDB:1MI6 PDB:1ML5
PDBsum:1GQE PDBsum:1MI6 PDBsum:1ML5 ProteinModelPortal:P07012
SMR:P07012 DIP:DIP-10559N IntAct:P07012 MINT:MINT-1238444
PaxDb:P07012 PRIDE:P07012 EnsemblBacteria:EBESCT00000002308
EnsemblBacteria:EBESCT00000016130 GeneID:12930712 GeneID:947369
KEGG:ecj:Y75_p2823 KEGG:eco:b2891 PATRIC:32121192 EchoBASE:EB0755
EcoGene:EG10762 BioCyc:EcoCyc:EG10762-MONOMER
BioCyc:ECOL316407:JW5847-MONOMER EvolutionaryTrace:P07012
Genevestigator:P07012 GO:GO:0015862 Uniprot:P07012
Length = 365
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 100/299 (33%), Positives = 165/299 (55%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDAD 63
+ +++ +++ GL L E ++D++ + A EL A++E+ D AD
Sbjct: 70 LDQMKQGLEDVSGLLELAVE-ADDEETFNEAVAELD-ALEEKLAQLEFRRMFSGEYDSAD 127
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
C L+++AG+GG EA +A + +MY R+++ +G+K E++ +E ++ G K + IS
Sbjct: 128 ---CYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKIS 184
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTY 182
G YG L+ E+G+HR+ R + GR HTS S + P+ D+ +D+ + DLRID Y
Sbjct: 185 GDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVY 244
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
R+ G+GGQH N T SAVR+THIPTG+ Q++RSQH N YE+E + +
Sbjct: 245 RTSGAGGQHVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKN 304
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
+ + + G S+ IR+Y R+ D R G+ +++G +LD FI+A L
Sbjct: 305 AEKQAMEDNKSDIGWGSQ-IRSYVLDDSRIKDLRTGVETRNTQAVLDG-SLDQFIEASL 361
>ZFIN|ZDB-GENE-050220-8 [details] [associations]
symbol:zgc:113104 "zgc:113104" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016149
"translation release factor activity, codon specific" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 InterPro:IPR014720 ZFIN:ZDB-GENE-050220-8
GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149 HOGENOM:HOG000074815
KO:K02835 EMBL:BC090173 IPI:IPI00484442 RefSeq:NP_001012512.1
UniGene:Dr.77520 ProteinModelPortal:Q5EB09 GeneID:503530
KEGG:dre:503530 InParanoid:Q5EB09 NextBio:20866191 Uniprot:Q5EB09
Length = 235
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 99/230 (43%), Positives = 137/230 (59%)
Query: 87 VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP-- 144
+F MY+ ++ K W FE+ T ++ G AS +SG V+ LKFE G HRVQR+P
Sbjct: 1 MFDMYQGFASYKNWDFELFNYTPAEYGGLHHASVRVSGECVFRWLKFEGGTHRVQRIPEV 60
Query: 145 -LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
L+ + R+HT ++V +LPQ +EVD+ + +DLRIDT+RS G+GGQH NTT+SAVR+ H
Sbjct: 61 GLSSRMQRIHTGTMTVIVLPQMEEVDIDIAPKDLRIDTFRSRGAGGQHVNTTDSAVRLVH 120
Query: 204 IPTGMTISIQDERSQHMNXXXXXXXXXXXXYE----MERSRIHLSRSKLRSEQIGSGDRS 259
+PTG Q RSQ N ++ +R + H +R +L Q+G+ +S
Sbjct: 121 LPTGTVSECQQFRSQLKNRETALRVLRARLHQCMMGQQREQTHTAR-RL---QVGTRAQS 176
Query: 260 ERIRTYNFPQGRVTDHRVGITHHAISDMMEG-ENLDIFIDAL-LLQQEMD 307
ERIRTYNF Q RVTDHR+G I + M G E L+ D L LLQ+ D
Sbjct: 177 ERIRTYNFTQDRVTDHRIGFVTRDIKEFMRGAEGLE---DLLRLLQENQD 223
>ASPGD|ASPL0000035902 [details] [associations]
symbol:AN3462 species:162425 "Emericella nidulans"
[GO:0070126 "mitochondrial translational termination" evidence=IEA]
[GO:0016149 "translation release factor activity, codon specific"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003747
"translation release factor activity" evidence=IEA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:BN001306 GO:GO:0016149 HOGENOM:HOG000074815
OMA:QCQAGNA EnsemblFungi:CADANIAT00009571 Uniprot:C8VHA3
Length = 418
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 108/332 (32%), Positives = 170/332 (51%)
Query: 5 SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRXXXXXXXXXXPKDDADE 64
+E + + L S++ + + ++ +A EEL + P+ +
Sbjct: 82 AEWSNANESMSELHSMLEDPDTEAELRSIAVEELQTTEAKLTAISDNLKRALVPRHPFAD 141
Query: 65 RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG--YKEASAAI 122
C+LE+R G GG+EAS+FA ++ +MY + +G + ++ + D R EA +
Sbjct: 142 LSCLLEIRPGAGGDEASIFAFELLQMYVAFCAHQGLRSTLMKLERGDNRADALTEAVLEV 201
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-------------- 168
G Y L+ ESG+HRVQRVP TE GR HTSAVSV +LP +
Sbjct: 202 EAEGAYDLLRTESGVHRVQRVPTTEAKGRTHTSAVSVMVLPSFPDTGGGDGAFNFDDPNS 261
Query: 169 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXX 228
D + +++R + R+ G+GGQH N T SA+R+TH+PTG+ +S+QD RSQH N
Sbjct: 262 DYYIDPQEVRTEKMRASGAGGQHVNKTESAIRLTHMPTGIVVSMQDSRSQHANRKKAWQI 321
Query: 229 XXXXXYEM-----ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHA 283
E E+ + L R + IG R +++RTYN+ Q R TDHR G T H
Sbjct: 322 LRAKLAEARQEAREQELVELRRGAMGG--IGRMGRGDKVRTYNYGQSRCTDHRSGFTVHN 379
Query: 284 ISDMMEG-ENLDIFIDAL---LLQQEMDAIAS 311
+ +++EG E L +D++ L+ +E+ A+ S
Sbjct: 380 LDNVLEGGETLVKVMDSVRSWLIDREILALTS 411
>TIGR_CMR|APH_0479 [details] [associations]
symbol:APH_0479 "peptide chain release factor 2,
programmed frameshift" species:212042 "Anaplasma phagocytophilum
HZ" [GO:0003747 "translation release factor activity" evidence=ISS]
[GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG1186 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 RefSeq:YP_505078.1 ProteinModelPortal:Q2GKM3
STRING:Q2GKM3 GeneID:3930254 KEGG:aph:APH_0479 PATRIC:20949594
ProtClustDB:CLSK747346 Uniprot:Q2GKM3
Length = 376
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 106/316 (33%), Positives = 161/316 (50%)
Query: 7 LRTKQKEIDGLKSLIYECSEDKDMLDMATEELC---LAIDEEKRXXXXXXXXXXPKDDAD 63
L + K++ L +I + S+D+D L EL L I ++K +AD
Sbjct: 73 LEKEHKDLAELAEMISD-SDDRDFLATINAELQSLKLRISQKKTECMFSH-------EAD 124
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQK-KGWKFEVVGVTESDLRGYKEASAAI 122
C L +R+G GG E+S + + +MY ++++ + E V + + G K + I
Sbjct: 125 ANSCFLTIRSGAGGTESSDWVCMLLRMYTKWAESFHEFTVETVDSVDGEETGLKAVTVKI 184
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD-EVDVRLRNEDLRIDT 181
G+G YG + ESGIHR+ R+ + + + HTS SV + P D E+D+++ +DLRIDT
Sbjct: 185 CGIGAYGWARTESGIHRLVRISPFDHAAKRHTSFASVEVSPVVDHEIDIKILEKDLRIDT 244
Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME--RS 239
YR+ G+GGQH N T SAVR+THIP+GM + Q RSQH N YEME
Sbjct: 245 YRASGAGGQHVNKTESAVRITHIPSGMVVQCQTSRSQHQNRAEAYSLLKSRLYEMELQEK 304
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIFID 298
+++ +IG G +IR+Y P V D R G + +M G+ LD FI
Sbjct: 305 EKRMAQDHQNKCEIGWG---HQIRSYVMHPYRMVKDLRTGHETGNVDAVMNGD-LDAFIT 360
Query: 299 ALLLQQEMDAIASFGS 314
A L++ + + GS
Sbjct: 361 AALMRGSLAKVQRSGS 376
>TIGR_CMR|CJE_1628 [details] [associations]
symbol:CJE_1628 "peptide chain release factor 2"
species:195099 "Campylobacter jejuni RM1221" [GO:0003747
"translation release factor activity" evidence=ISS] [GO:0006415
"translational termination" evidence=ISS] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG1186
GO:GO:0016149 RefSeq:YP_179609.1 ProteinModelPortal:Q5HSX6
STRING:Q5HSX6 GeneID:3232256 KEGG:cjr:CJE1628 PATRIC:20045053
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
BioCyc:CJEJ195099:GJC0-1658-MONOMER PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 Uniprot:Q5HSX6
Length = 365
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 84/242 (34%), Positives = 141/242 (58%)
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
D ++ I+ + G GG E++ +A +++MY R+ +++G+K E + E + G K+ S +
Sbjct: 123 DGKNAIVSIHPGAGGTESNDWASILYRMYLRFCEREGFKVETLDFQEGEEAGLKDVSFLV 182
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDT 181
G YG LK E+GIHR+ R + +GR HTS SV + P+ D+ +++ + +D+RID
Sbjct: 183 KGENAYGYLKAENGIHRLVRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDY 242
Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRI 241
YR+ G+GGQH N T SAVR+TH PTG+ + Q++RSQH N YE+E +
Sbjct: 243 YRASGAGGQHVNKTESAVRITHFPTGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQ 302
Query: 242 HLSRSKLRSEQIGSGDRSERIRTYN-FPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
S + +IG G +IR+Y FP +V D+R G + ++++G+ + I+ +
Sbjct: 303 QDSANTGEKSEIGWG---HQIRSYVLFPYQQVKDNRSGEAFSQVDNILDGD-IKKMIEGV 358
Query: 301 LL 302
L+
Sbjct: 359 LI 360
>TIGR_CMR|SPO_2585 [details] [associations]
symbol:SPO_2585 "peptide chain release factor 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003747 "translation
release factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR Gene3D:3.30.160.20 GO:GO:0016149
HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR ProtClustDB:PRK00578
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_167798.1
ProteinModelPortal:Q5LQA8 SMR:Q5LQA8 GeneID:3194310
KEGG:sil:SPO2585 PATRIC:23378573 Uniprot:Q5LQA8
Length = 375
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 96/246 (39%), Positives = 138/246 (56%)
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
+AD D LE+ AG GG E+ +A + +MY R+++KKG+K E+ + D G K A+
Sbjct: 120 EADGNDTFLEINAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAY 179
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRI 179
ISG YG LK ESG+HR+ R+ + + + HTS SV + P D+ +++ + D+RI
Sbjct: 180 KISGHNAYGWLKSESGVHRLVRISPYDAAAKRHTSFSSVWVYPVVDDNIEIEVNPSDIRI 239
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERS 239
DTYRS G+GGQH NTT+SAVR+THIPTG+ ++ E+SQH N Y+ E
Sbjct: 240 DTYRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRDIAMKALKSRLYQQELD 298
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISD---MMEGENLDI 295
R + + E G +IR+Y P V D R G H SD +++G LD
Sbjct: 299 RRN-AEINAAHEAKGDAGWGNQIRSYVLQPYQMVKDLRTG---HETSDTKGVLDGA-LDG 353
Query: 296 FIDALL 301
F+ A L
Sbjct: 354 FMAATL 359
>DICTYBASE|DDB_G0288835 [details] [associations]
symbol:prfB "class I peptide chain release factor"
species:44689 "Dictyostelium discoideum" [GO:0016149 "translation
release factor activity, codon specific" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003747 "translation release factor activity"
evidence=IEA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 dictyBase:DDB_G0288835
GO:GO:0005737 Gene3D:3.30.160.20 GenomeReviews:CM000154_GR
eggNOG:COG1186 EMBL:AAFI02000125 GO:GO:0016149
PANTHER:PTHR11075:SF6 RefSeq:XP_636549.1 ProteinModelPortal:Q54IC8
STRING:Q54IC8 EnsemblProtists:DDB0237485 GeneID:8626834
KEGG:ddi:DDB_G0288835 InParanoid:Q54IC8 OMA:LINESHN Uniprot:Q54IC8
Length = 424
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/249 (37%), Positives = 139/249 (55%)
Query: 59 KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
KDD+ + C+LE++AG GG ++ + +F+MY ++ +KG+ E++ + + GY+ A
Sbjct: 179 KDDS--KGCLLEIQAGAGGNDSMDWTKILFEMYCKWGARKGYNVEIIDTADGEF-GYRHA 235
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDL 177
S I G YG L+ E GIHR+ R+ SG+ HTS SV + P +D+ + + + +DL
Sbjct: 236 SLKIDGHNAYGWLRTEMGIHRLIRISPFSSSGKRHTSFASVVVYPISDDSIKINIDPKDL 295
Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME 237
+T RS G+GGQH N T SAVR+ HIPTG+++ ERSQH N Y E
Sbjct: 296 HFETLRSSGAGGQHVNKTESAVRIVHIPTGISVLSSSERSQHQNKSNGLLLLKSKLYSHE 355
Query: 238 -RSRIHLSRSKLRSEQIGSGD-RSERI-RTYNF-PQGRVTDHRVGITHHAISDMMEGEN- 292
+ +I +S R E +G S+ + R Y+ PQ RV D R GI IS +++GE
Sbjct: 356 LKKKIEAEKS-FRDE-LGKNSWASDSVVRNYSMHPQERVKDQRTGIEVLQISKILDGEEE 413
Query: 293 LDIFIDALL 301
LD I L
Sbjct: 414 LDNMIKKAL 422
>TAIR|locus:2010748 [details] [associations]
symbol:AT1G56350 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006415 "translational
termination" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825
"cotyledon development" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005737 Gene3D:3.30.160.20 GO:GO:0016149
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:SAVRITY
IPI:IPI00540527 RefSeq:NP_176032.2 UniGene:At.42791
ProteinModelPortal:F4I532 SMR:F4I532 PRIDE:F4I532
EnsemblPlants:AT1G56350.1 GeneID:842089 KEGG:ath:AT1G56350
Uniprot:F4I532
Length = 482
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 101/303 (33%), Positives = 160/303 (52%)
Query: 13 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEE--------KRXXXXXXXXXXPKDDADE 64
++ G+ + E E DML +A EE ++ E +R D D
Sbjct: 174 KMKGVMTFERELLEHIDMLKLAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDP 233
Query: 65 RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
C +EV+AG GG E++ +A V +MY+ ++Q++ + VV ++ G K A+ ++G
Sbjct: 234 CSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNG 293
Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR--LRNEDLRIDTY 182
YG K E G+HR+ R+ + R HTS +VA++P + R + + DLRI+ +
Sbjct: 294 EYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERF 353
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRIH 242
RSGG+GGQHANTT+SAVR+ HIPTG+T + Q+ERSQH N ++E +R
Sbjct: 354 RSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMAR-Q 412
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISD---MMEGENLDIFID 298
+ + ++ + +IRTY P V D R T++ +SD ++EG+ LD FI
Sbjct: 413 TAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLR---TNYEVSDPDSVLEGD-LDGFIL 468
Query: 299 ALL 301
+ L
Sbjct: 469 SFL 471
>UNIPROTKB|Q3Z8Y6 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003747 "translation release
factor activity" evidence=ISS] [GO:0006415 "translational
termination" evidence=ISS] HAMAP:MF_00094 InterPro:IPR000352
InterPro:IPR004374 InterPro:IPR005139 InterPro:IPR020853
Pfam:PF00472 Pfam:PF03462 SMART:SM00937 InterPro:IPR014720
GO:GO:0005737 Gene3D:3.30.160.20 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG1186 GO:GO:0003747
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 OMA:MGWGSQI RefSeq:YP_181313.1
ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6 GeneID:3230122
KEGG:det:DET0570 PATRIC:21608209 ProtClustDB:CLSK837416
Uniprot:Q3Z8Y6
Length = 362
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 92/244 (37%), Positives = 139/244 (56%)
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
D R+ +L V AG GG E+ +A + +M+ R+++KKG+ EV+ + + G K A+ I
Sbjct: 116 DSRNALLTVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQI 175
Query: 123 SGVGVYGKLKFESGIHRVQRV-PLTEKSGRVHTSAVSVAILPQA-DEVDVRLRNEDLRID 180
G YG LK E G+HR+ R+ P R HTS V ++P+A D VD+ ++ ED++ID
Sbjct: 176 EGEYAYGFLKSEHGVHRLIRLSPFDADHAR-HTSFALVEVMPEAEDSVDIDIKPEDIKID 234
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSR 240
+RS G GGQ+ ++AVRVTHIP+G+ ++ Q ERSQH N +E ++
Sbjct: 235 MFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAK 294
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R+K++ E+I S + +IR+Y P V DHR ++EGE LD FI+A
Sbjct: 295 RAEERAKIKGERI-SAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGE-LDGFINA 352
Query: 300 LLLQ 303
L Q
Sbjct: 353 YLRQ 356
>TIGR_CMR|DET_0570 [details] [associations]
symbol:DET_0570 "peptide chain release factor 2,
programmed frameshift" species:243164 "Dehalococcoides ethenogenes
195" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG1186
GO:GO:0003747 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 OMA:MGWGSQI
RefSeq:YP_181313.1 ProteinModelPortal:Q3Z8Y6 STRING:Q3Z8Y6
GeneID:3230122 KEGG:det:DET0570 PATRIC:21608209
ProtClustDB:CLSK837416 Uniprot:Q3Z8Y6
Length = 362
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 92/244 (37%), Positives = 139/244 (56%)
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
D R+ +L V AG GG E+ +A + +M+ R+++KKG+ EV+ + + G K A+ I
Sbjct: 116 DSRNALLTVHAGAGGVESQDWAGMLLRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQI 175
Query: 123 SGVGVYGKLKFESGIHRVQRV-PLTEKSGRVHTSAVSVAILPQA-DEVDVRLRNEDLRID 180
G YG LK E G+HR+ R+ P R HTS V ++P+A D VD+ ++ ED++ID
Sbjct: 176 EGEYAYGFLKSEHGVHRLIRLSPFDADHAR-HTSFALVEVMPEAEDSVDIDIKPEDIKID 234
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSR 240
+RS G GGQ+ ++AVRVTHIP+G+ ++ Q ERSQH N +E ++
Sbjct: 235 MFRSSGPGGQNVQKVSTAVRVTHIPSGIVVASQTERSQHQNREIAMRILASKLLAVEIAK 294
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R+K++ E+I S + +IR+Y P V DHR ++EGE LD FI+A
Sbjct: 295 RAEERAKIKGERI-SAEWGNQIRSYVLHPYKMVKDHRTDYEVGNAEAVLEGE-LDGFINA 352
Query: 300 LLLQ 303
L Q
Sbjct: 353 YLRQ 356
>TIGR_CMR|ECH_0705 [details] [associations]
symbol:ECH_0705 "peptide chain release factor 2,
programmed frameshift" species:205920 "Ehrlichia chaffeensis str.
Arkansas" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745 SMART:SM00937
InterPro:IPR014720 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR Gene3D:3.30.160.20 eggNOG:COG1186
GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836 OMA:KAWDMLR
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 RefSeq:YP_507510.1
ProteinModelPortal:Q2GGC3 STRING:Q2GGC3 GeneID:3927613
KEGG:ech:ECH_0705 PATRIC:20576858 ProtClustDB:CLSK748740
Uniprot:Q2GGC3
Length = 366
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 82/245 (33%), Positives = 139/245 (56%)
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQ-KKGWKFEVVGVTESDLRGYKEA 118
++AD DC +E+++G GG E++ ++ +F+MY R+++ +K E+V + + G K A
Sbjct: 120 NEADHNDCFIEIQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSA 179
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDL 177
+ + G YG K ESGIHR+ R+ + + HT+ S+ + P +E ++ + ++DL
Sbjct: 180 TIKVIGDNAYGWAKTESGIHRLVRISPFNSNAKRHTTFSSILVSPVINEDTNIEILDKDL 239
Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME 237
RIDTYR+ G+GGQH N T SAVR+THIP+G+ + Q+ RSQH N Y+++
Sbjct: 240 RIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLK 299
Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIF 296
++ +++ G +IR+Y P V D R G ++ +++G NLD F
Sbjct: 300 LQEKEKKMAEEHNKRCNIG-WGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDG-NLDSF 357
Query: 297 IDALL 301
I + L
Sbjct: 358 IISAL 362
>TIGR_CMR|NSE_0604 [details] [associations]
symbol:NSE_0604 "peptide chain release factor 2,
programmed frameshift" species:222891 "Neorickettsia sennetsu str.
Miyayama" [GO:0003747 "translation release factor activity"
evidence=ISS] [GO:0006415 "translational termination" evidence=ISS]
HAMAP:MF_00094 InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462
PROSITE:PS00745 SMART:SM00937 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 eggNOG:COG1186 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0016149 HOGENOM:HOG000074814
KO:K02836 PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020
RefSeq:YP_506484.1 ProteinModelPortal:Q2GDG2 STRING:Q2GDG2
GeneID:3931929 KEGG:nse:NSE_0604 PATRIC:22681243 OMA:SAVRITY
ProtClustDB:CLSK2527643 Uniprot:Q2GDG2
Length = 365
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 90/306 (29%), Positives = 161/306 (52%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKD---MLDMATEELCLAIDEEKRXXXXXXXXXXPKD 60
+ E + ++D L +I S+D + M D+ E L L +K+
Sbjct: 65 LKEFKELSIQLDDLIEMIELASKDHEEETMKDLERELLLLKEKIQKKEIECLFSG----- 119
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQ-KKGWKFEVVGVTESDLRGYKEAS 119
+AD DC+LE+++G GG E++ +A+ + +MY R+++ ++ ++V E + G K +
Sbjct: 120 EADGNDCLLEIQSGAGGTESNDWAMMLLRMYTRWAEIYHKFQVQIVDKVEGEETGIKSCT 179
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD-EVDVRLRNEDLR 178
+ G YG + E+G+HR+ R+ + + + HTS + + P + E+++ + +DL+
Sbjct: 180 LKVMGKNAYGWARTETGVHRLVRISPFDANAKRHTSFAKIFVSPCIEGEINISIDEKDLK 239
Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME- 237
IDTYR+ G+GGQH N T SA+R+TH+P+ + + Q RSQH N YE+E
Sbjct: 240 IDTYRASGAGGQHVNKTESAIRITHLPSKIVVQSQSSRSQHQNKAEAMQMLKSRLYEIEL 299
Query: 238 -RSRIHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDI 295
+ L+ ++ + IG G +IR+Y P + D R G I+ +++G+ LD
Sbjct: 300 RKKEEKLNAARNVEDSIGWG---YQIRSYVLHPYQMIKDLRTGHEVGNITSVLDGD-LDS 355
Query: 296 FIDALL 301
FI A +
Sbjct: 356 FIIATI 361
>UNIPROTKB|Q5TF45 [details] [associations]
symbol:MTRF1L "Peptide chain release factor 1-like,
mitochondrial" species:9606 "Homo sapiens" [GO:0003747 "translation
release factor activity" evidence=IEA] InterPro:IPR000352
Pfam:PF00472 PROSITE:PS00745 InterPro:IPR014720 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003747 EMBL:AL080276 eggNOG:COG0216
HOGENOM:HOG000074815 UniGene:Hs.225836 HGNC:HGNC:21051
IPI:IPI00514520 SMR:Q5TF45 STRING:Q5TF45 Ensembl:ENST00000448966
Uniprot:Q5TF45
Length = 164
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 65/123 (52%), Positives = 82/123 (66%)
Query: 114 GYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLR 173
G + ASA+I G Y +KFE G+HRVQRVP TEK GRVHTS ++VAILPQ E+++ +
Sbjct: 40 GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVIN 99
Query: 174 NEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXX 233
+DLRIDT R+ G+GGQH NTT+SAVR+ H+PTG+ Q ERSQ N
Sbjct: 100 PKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKL 159
Query: 234 YEM 236
Y M
Sbjct: 160 YSM 162
>TAIR|locus:2158936 [details] [associations]
symbol:HCF109 "high chlorophyll fluorescent 109"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006415 "translational termination"
evidence=IEA;ISS;IMP] [GO:0016149 "translation release factor
activity, codon specific" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006396 "RNA processing" evidence=IMP] [GO:0009657 "plastid
organization" evidence=IMP] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 EMBL:CP002688 GO:GO:0009570
Gene3D:3.30.160.20 GO:GO:0006396 GO:GO:0009657 GO:GO:0006415
GO:GO:0016149 EMBL:AB018112 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 TIGRFAMs:TIGR00020 HSSP:P07012
UniGene:At.9505 EMBL:AY056234 EMBL:AY117253 EMBL:AY084711
IPI:IPI00546331 RefSeq:NP_851096.1 ProteinModelPortal:Q9LVY0
SMR:Q9LVY0 STRING:Q9LVY0 PRIDE:Q9LVY0 EnsemblPlants:AT5G36170.1
GeneID:833614 KEGG:ath:AT5G36170 TAIR:At5g36170 InParanoid:Q9LVY0
OMA:MGWGSQI PhylomeDB:Q9LVY0 ProtClustDB:CLSN2680355
ArrayExpress:Q9LVY0 Genevestigator:Q9LVY0 Uniprot:Q9LVY0
Length = 456
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 92/315 (29%), Positives = 150/315 (47%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE-KRXXXXXXXXXXPK 59
M L+SE +T ++ + + L +E+ D D++ E + I +E +
Sbjct: 144 MRLLSEFKTMVEDAETIVKL----TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLS 199
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D+ ++ + AG GG +A +A + +MY R+ +K+ +K +VV ++ + G K A+
Sbjct: 200 GPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKSAT 259
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE--VDVRLRNEDL 177
I G YG + E G HR+ R G TS V ++P E V + + EDL
Sbjct: 260 LEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEEDL 319
Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEME 237
I R+GG GGQ+ N +AVR+THIPTG+ + +ERSQ N +
Sbjct: 320 DISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIA 379
Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIF 296
+ ++R + + + ++IR Y F P V D R G I+ +M+G+ LD F
Sbjct: 380 EEQRATEIKEIRGDAV-KAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGD-LDPF 437
Query: 297 IDALLLQQEMDAIAS 311
I A L + A+AS
Sbjct: 438 IKAYLKHKYTLAMAS 452
>UNIPROTKB|P66026 [details] [associations]
symbol:prfB "Peptide chain release factor 2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00094
InterPro:IPR000352 InterPro:IPR004374 InterPro:IPR005139
InterPro:IPR020853 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 GO:GO:0040007
GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR Gene3D:3.30.160.20 EMBL:BX842582
eggNOG:COG1186 GO:GO:0016149 HOGENOM:HOG000074814 KO:K02836
OMA:KAWDMLR ProtClustDB:PRK00578 PANTHER:PTHR11075:SF6
TIGRFAMs:TIGR00020 PIR:H70919 RefSeq:NP_217621.1 RefSeq:NP_337713.1
RefSeq:YP_006516568.1 ProteinModelPortal:P66026 SMR:P66026
EnsemblBacteria:EBMYCT00000000199 EnsemblBacteria:EBMYCT00000071451
GeneID:13317912 GeneID:888820 GeneID:926714 KEGG:mtc:MT3188
KEGG:mtu:Rv3105c KEGG:mtv:RVBD_3105c PATRIC:18128778
TubercuList:Rv3105c Uniprot:P66026
Length = 371
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 75/239 (31%), Positives = 126/239 (52%)
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
DER+ ++ +R+G GG +A+ +A + +MY R++++ + EV + ++ G K A+ A+
Sbjct: 125 DEREALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAV 184
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
YG L E G HR+ R+ + R TS V +LP + D + + D+R+D
Sbjct: 185 HAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDV 244
Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXYEMERSRI 241
YRS G GGQ NTT+SAVR+THIP+G+ ++ Q+E+SQ N E +R
Sbjct: 245 YRSSGPGGQSVNTTDSAVRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEE 304
Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
L+++ G ++R+Y P V D R + +++G+ LD F++A
Sbjct: 305 RAELDALKAD--GGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGD-LDGFLEA 360
>GENEDB_PFALCIPARUM|PF14_0265 [details] [associations]
symbol:PF14_0265 "peptide chain release factor
1, putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR005139
Pfam:PF00472 Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737
Gene3D:3.30.160.20 EMBL:AE014187 GO:GO:0016149 KO:K02835
RefSeq:XP_001348439.1 ProteinModelPortal:Q8ILH8
EnsemblProtists:PF14_0265:mRNA GeneID:811847 KEGG:pfa:PF14_0265
EuPathDB:PlasmoDB:PF3D7_1428600 HOGENOM:HOG000281260
ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 72/221 (32%), Positives = 115/221 (52%)
Query: 63 DERDCI-LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV-GVTESDLRGYKEASA 120
D ++ I +E R G GGEEA ++ ++ Y+ ++++ K E + +++S + KE
Sbjct: 61 DNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLR 120
Query: 121 AISG-----VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL-PQADEVDVRLRN 174
I + +Y K ESGIH+V+R+P + R+H+S +VAI + +E +
Sbjct: 121 IIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINL 180
Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXY 234
+DL+I T+RS GGQ+ N S V + H PTG+ Q+ER+Q +N
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQ 240
Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDH 275
ME R++ I +RS RIRTYNF +G +TDH
Sbjct: 241 HMESKEKENMVQHERAKLIKESNRSNRIRTYNFFRGYITDH 281
>UNIPROTKB|Q8ILH8 [details] [associations]
symbol:PF14_0265 "Peptide chain release factor 1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472
Pfam:PF03462 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AE014187 GO:GO:0016149 KO:K02835 RefSeq:XP_001348439.1
ProteinModelPortal:Q8ILH8 EnsemblProtists:PF14_0265:mRNA
GeneID:811847 KEGG:pfa:PF14_0265 EuPathDB:PlasmoDB:PF3D7_1428600
HOGENOM:HOG000281260 ProtClustDB:CLSZ2433411 Uniprot:Q8ILH8
Length = 304
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 72/221 (32%), Positives = 115/221 (52%)
Query: 63 DERDCI-LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV-GVTESDLRGYKEASA 120
D ++ I +E R G GGEEA ++ ++ Y+ ++++ K E + +++S + KE
Sbjct: 61 DNKNFIRIEFRPGVGGEEAFTWSKELLNTYKLFAERNKCKVEKIQDISDSLVISSKENLR 120
Query: 121 AISG-----VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL-PQADEVDVRLRN 174
I + +Y K ESGIH+V+R+P + R+H+S +VAI + +E +
Sbjct: 121 IIKEDKQIEINLYDLFKNESGIHQVKRIPKNDSKNRIHSSTATVAIFFHKKEEPKYEINL 180
Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXXXXY 234
+DL+I T+RS GGQ+ N S V + H PTG+ Q+ER+Q +N
Sbjct: 181 KDLKISTFRSSKPGGQNVNKIESGVCILHKPTGIQTECQEERTQELNKKLAMKRLIQKIQ 240
Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDH 275
ME R++ I +RS RIRTYNF +G +TDH
Sbjct: 241 HMESKEKENMVQHERAKLIKESNRSNRIRTYNFFRGYITDH 281
>UNIPROTKB|Q74EJ1 [details] [associations]
symbol:GSU0971 "Hydrolase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 151 (58.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 170 VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
V +R+ D++++ YR+ G GGQH NTT+SAVR+ H+PTG+ + + RSQ N
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQN 54
>TIGR_CMR|GSU_0971 [details] [associations]
symbol:GSU_0971 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_952025.1 ProteinModelPortal:Q74EJ1 GeneID:2687546
KEGG:gsu:GSU0971 PATRIC:22024716 OMA:QHRNKTE ProtClustDB:CLSK828124
BioCyc:GSUL243231:GH27-988-MONOMER Uniprot:Q74EJ1
Length = 107
Score = 151 (58.2 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 170 VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
V +R+ D++++ YR+ G GGQH NTT+SAVR+ H+PTG+ + + RSQ N
Sbjct: 3 VDIRDADIKVEYYRASGPGGQHRNTTDSAVRIRHLPTGIVVQASESRSQAQN 54
>GENEDB_PFALCIPARUM|MAL7P1.20 [details] [associations]
symbol:MAL7P1.20 "peptide chain release factor,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 169 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXX 228
D + DL I T RSGG GGQ+ N +AVR+ H PT +++ ER+Q +N
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKR 277
Query: 229 XXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN-FPQGRVTDHRVGITHHAISDM 287
++ + + +L ++ + E+IR Y + + D R + I +
Sbjct: 278 IYEKLLYLQTEALKNKKYELANKSLTHF--GEQIRNYVLYGNKMIKDTRTNVFSTDIDKV 335
Query: 288 M-EGENLDIFIDA 299
+ +GE +DIFIDA
Sbjct: 336 LYQGE-IDIFIDA 347
Score = 131 (51.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERY----SQKKGWKFEVVGVTESDLRGYKEAS 119
+ C L + +GTGG EA F ++ MY +Y +K K+EV+ ++++++ G K+
Sbjct: 49 KNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKKVE 107
Query: 120 AAISGVGVYGKLKFESGIHR-VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
I G + E GIHR V+ P ++ ++ TS V V ++P + D+ + N
Sbjct: 108 IKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKM-TSFVKVDVIPTLNFNDLNVINF--- 163
Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
++T GS T S+ + + + D + +MN
Sbjct: 164 LNTAEGVGSSSSSKLTKESSDKKQNKNKHKQLKESDNNNNNMN 206
>UNIPROTKB|Q8IC21 [details] [associations]
symbol:MAL7P1.20 "Peptide chain release factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000352 InterPro:IPR004374
InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462 PROSITE:PS00745
SMART:SM00937 InterPro:IPR014720 GO:GO:0005737 Gene3D:3.30.160.20
EMBL:AL844506 GO:GO:0016149 HOGENOM:HOG000074814
PANTHER:PTHR11075:SF6 RefSeq:XP_001348982.1 HSSP:P07012
ProteinModelPortal:Q8IC21 IntAct:Q8IC21 MINT:MINT-1551615
EnsemblProtists:MAL7P1.20:mRNA GeneID:2655192 KEGG:pfa:MAL7P1.20
EuPathDB:PlasmoDB:PF3D7_0704900 ProtClustDB:CLSZ2434502
Uniprot:Q8IC21
Length = 352
Score = 146 (56.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 169 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXX 228
D + DL I T RSGG GGQ+ N +AVR+ H PT +++ ER+Q +N
Sbjct: 218 DFVINKSDLVIQTMRSGGKGGQNVNKVETAVRILHKPTNISVKASSERTQLLNKRNALKR 277
Query: 229 XXXXXYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN-FPQGRVTDHRVGITHHAISDM 287
++ + + +L ++ + E+IR Y + + D R + I +
Sbjct: 278 IYEKLLYLQTEALKNKKYELANKSLTHF--GEQIRNYVLYGNKMIKDTRTNVFSTDIDKV 335
Query: 288 M-EGENLDIFIDA 299
+ +GE +DIFIDA
Sbjct: 336 LYQGE-IDIFIDA 347
Score = 131 (51.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 42/163 (25%), Positives = 77/163 (47%)
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERY----SQKKGWKFEVVGVTESDLRGYKEAS 119
+ C L + +GTGG EA F ++ MY +Y +K K+EV+ ++++++ G K+
Sbjct: 49 KNSCSLILSSGTGGTEACDFCNMLYNMYIKYLCRIKNRKNIKYEVIDISKNEV-GIKKVE 107
Query: 120 AAISGVGVYGKLKFESGIHR-VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
I G + E GIHR V+ P ++ ++ TS V V ++P + D+ + N
Sbjct: 108 IKIDGEYSFYNFVSEKGIHRLVRNSPFNAQNKKM-TSFVKVDVIPTLNFNDLNVINF--- 163
Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
++T GS T S+ + + + D + +MN
Sbjct: 164 LNTAEGVGSSSSSKLTKESSDKKQNKNKHKQLKESDNNNNNMN 206
>CGD|CAL0005347 [details] [associations]
symbol:orf19.5488 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 CGD:CAL0005347 Gene3D:3.30.160.20 GO:GO:0005622
eggNOG:COG1186 GO:GO:0003747 HOGENOM:HOG000217812 EMBL:AACQ01000196
EMBL:AACQ01000195 RefSeq:XP_711480.1 RefSeq:XP_711504.1
ProteinModelPortal:Q59P48 STRING:Q59P48 GeneID:3646889
GeneID:3646913 KEGG:cal:CaO19.12943 KEGG:cal:CaO19.5488
Uniprot:Q59P48
Length = 171
Score = 120 (47.3 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 25/51 (49%), Positives = 31/51 (60%)
Query: 172 LRNEDLRIDTYRSG-GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
++ ED+ G G GGQ N TNS V++THIPTGM +S Q RSQ N
Sbjct: 35 IKEEDIEEKFLHGGRGPGGQKINKTNSKVQLTHIPTGMVVSCQATRSQEQN 85
>TAIR|locus:2082563 [details] [associations]
symbol:PrfB3 "peptide chain release factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003747 "translation
release factor activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006415 "translational termination"
evidence=IEA;ISS] [GO:0016149 "translation release factor activity,
codon specific" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0043488 "regulation of mRNA
stability" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009772 "photosynthetic electron transport in
photosystem II" evidence=IMP] [GO:0010190 "cytochrome b6f complex
assembly" evidence=IMP] [GO:0048255 "mRNA stabilization"
evidence=IMP] [GO:0016556 "mRNA modification" evidence=RCA]
InterPro:IPR000352 InterPro:IPR005139 Pfam:PF00472 Pfam:PF03462
SMART:SM00937 InterPro:IPR014720 GO:GO:0009570 EMBL:CP002686
GO:GO:0043565 Gene3D:3.30.160.20 GO:GO:0009658 GO:GO:0048255
GO:GO:0003730 GO:GO:0009772 GO:GO:0016149 GO:GO:0010190
IPI:IPI00516531 RefSeq:NP_191278.2 UniGene:At.34857
ProteinModelPortal:F4J264 SMR:F4J264 EnsemblPlants:AT3G57190.1
GeneID:824886 KEGG:ath:AT3G57190 OMA:DIIPLFL Uniprot:F4J264
Length = 406
Score = 132 (51.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 68/321 (21%), Positives = 134/321 (41%)
Query: 3 LISELRTKQKEIDGLKSLIYECSEDKDML---DMATEELCL---AIDEE---KRXXXXXX 53
++ +L + K +D LK L Y+ E K ++ +M + L A D R
Sbjct: 98 ILLKLADRAKAVDSLKDLKYKAEEAKLIIQLGEMDAIDYSLFEQAYDSSLDVSRSLHHYE 157
Query: 54 XXXXPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTE--SD 111
+D D + +++G+ G ++ ++ V MY +++++ G V S+
Sbjct: 158 MSKLLRDQYDAEGACMIIKSGSPGAKSQIWTEQVVSMYIKWAERLGQNARVAEKCSLLSN 217
Query: 112 LRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR 171
G A+ YG L E G+HR+ ++ S ++ V + L D
Sbjct: 218 KSGVSSATIEFEFEFAYGYLLGERGVHRLI---ISSTSNEECSATVDIIPLFLRASPDFE 274
Query: 172 LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNXXXXXXXXXX 231
++ DL I +Y + H N V + HIP+G+T+ ER++ N
Sbjct: 275 VKEGDL-IVSYPAKED---HKIAENM-VCIHHIPSGVTLQSSGERNRFANRIKALNRLKA 329
Query: 232 XXYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGR--VTDHRVGITHHAISDMME 289
+ + + +K+ S+ I + E R+Y +G V D + G+ + +++
Sbjct: 330 KLLVIAKEQKVSDVNKIDSKNIL--EPREETRSY-VSKGHKMVVDRKTGLEILDLKSVLD 386
Query: 290 GENLDIFIDA-LLLQQEMDAI 309
G N+ + A + +++ +DAI
Sbjct: 387 G-NIGPLLGAHISMRRSIDAI 406
>TAIR|locus:2006897 [details] [associations]
symbol:AT1G33330 species:3702 "Arabidopsis thaliana"
[GO:0003747 "translation release factor activity" evidence=IEA;ISS]
[GO:0006415 "translational termination" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=RCA] InterPro:IPR000352 Pfam:PF00472
InterPro:IPR014720 EMBL:CP002684 GO:GO:0009507 Gene3D:3.30.160.20
GO:GO:0003747 EMBL:AC027035 EMBL:BT006129 EMBL:AK117494
IPI:IPI00545134 RefSeq:NP_174601.2 UniGene:At.28050
ProteinModelPortal:Q9C875 SMR:Q9C875 STRING:Q9C875 PRIDE:Q9C875
EnsemblPlants:AT1G33330.1 GeneID:840227 KEGG:ath:AT1G33330
TAIR:At1g33330 HOGENOM:HOG000152202 InParanoid:Q9C875 OMA:KSTIRTS
PhylomeDB:Q9C875 ProtClustDB:CLSN2680351 ArrayExpress:Q9C875
Genevestigator:Q9C875 Uniprot:Q9C875
Length = 257
Score = 128 (50.1 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 158 SVAILPQADEVD-VRLRNEDL----RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISI 212
SV+++ + ++ +E+L R++T+R G GGQH N +SAVR+ H+PTG+
Sbjct: 74 SVSVVSDVQSPNYLKFTDEELMKQCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQA 133
Query: 213 QDERSQHMN 221
++RSQH N
Sbjct: 134 VEDRSQHKN 142
>UNIPROTKB|Q74FR0 [details] [associations]
symbol:GSU0546 "Peptidyl-tRNA hydrolase-related protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
DL RS G+GGQH N T + V++ H PTG+ + +RSQ +N
Sbjct: 29 DLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVN 74
>TIGR_CMR|GSU_0546 [details] [associations]
symbol:GSU_0546 "peptidyl-tRNA hydrolase domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0016787 EMBL:AE017180
GenomeReviews:AE017180_GR HOGENOM:HOG000244440 GO:GO:0003747
RefSeq:NP_951604.1 ProteinModelPortal:Q74FR0 GeneID:2685772
KEGG:gsu:GSU0546 PATRIC:22023849 OMA:TATCVQI ProtClustDB:CLSK827916
BioCyc:GSUL243231:GH27-530-MONOMER Uniprot:Q74FR0
Length = 126
Score = 106 (42.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
DL RS G+GGQH N T + V++ H PTG+ + +RSQ +N
Sbjct: 29 DLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVN 74
>POMBASE|SPBC1105.18c [details] [associations]
symbol:SPBC1105.18c "peptide release factor
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003747
"translation release factor activity" evidence=IEA] [GO:0004045
"aminoacyl-tRNA hydrolase activity" evidence=ISM] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006415 "translational
termination" evidence=IC] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000352 Pfam:PF00472 InterPro:IPR014720
PomBase:SPBC1105.18c GO:GO:0005739 EMBL:CU329671 Gene3D:3.30.160.20
GO:GO:0032543 eggNOG:COG1186 GO:GO:0004045 GO:GO:0003747
GO:GO:0006415 OrthoDB:EOG4WHCWF RefSeq:NP_596474.2
ProteinModelPortal:Q9Y811 STRING:Q9Y811 EnsemblFungi:SPBC1105.18c.1
GeneID:2539814 KEGG:spo:SPBC1105.18c NextBio:20800963
Uniprot:Q9Y811
Length = 162
Score = 106 (42.4 bits), Expect = 0.00035, P = 0.00035
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 171 RLRNEDLRIDTYRSG-GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
RL+ ED+ +T+ G G GGQ N T+ +V HIPTG+ + QD RS+ N
Sbjct: 46 RLQEEDIE-ETFICGKGPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQN 96
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 316 294 0.00091 115 3 11 22 0.42 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 594 (63 KB)
Total size of DFA: 183 KB (2105 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.74u 0.12s 21.86t Elapsed: 00:00:01
Total cpu time: 21.75u 0.12s 21.87t Elapsed: 00:00:01
Start: Sat May 11 06:41:20 2013 End: Sat May 11 06:41:21 2013