BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 021200
         (316 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255548277|ref|XP_002515195.1| peptide chain release factor, putative [Ricinus communis]
 gi|223545675|gb|EEF47179.1| peptide chain release factor, putative [Ricinus communis]
          Length = 422

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/314 (87%), Positives = 300/314 (95%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           LISELR+ QKEIDGL+SL+ EC EDK M+DMA EEL  AI+EEKRLQ++LLKSLLP DDA
Sbjct: 109 LISELRSIQKEIDGLRSLMAECPEDKHMIDMANEELNQAIEEEKRLQNVLLKSLLPTDDA 168

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DERDCILEVRAGTGGEEASLF++D+F+MYERYSQKKGWKFEVV +TESDL+GYKEASAAI
Sbjct: 169 DERDCILEVRAGTGGEEASLFSMDIFRMYERYSQKKGWKFEVVDITESDLKGYKEASAAI 228

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GV+GKLKFESGIHRVQRVP+TEKSGRVHTSAVSVAILPQADEVDV+LRNEDLRIDTY
Sbjct: 229 SGAGVFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTY 288

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RSGGSGGQHANTTNSAVRVTH+PTGMT+SIQDERSQHMNKAKALKVLCAKLYE+ERSRI 
Sbjct: 289 RSGGSGGQHANTTNSAVRVTHLPTGMTVSIQDERSQHMNKAKALKVLCAKLYEIERSRIQ 348

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           +SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAI++MM+GE+LD+FIDALLL
Sbjct: 349 MSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAINNMMQGESLDVFIDALLL 408

Query: 303 QQEMDAIASFGSTQ 316
           QQEMDAIASF   +
Sbjct: 409 QQEMDAIASFSCAE 422


>gi|224130870|ref|XP_002320945.1| predicted protein [Populus trichocarpa]
 gi|222861718|gb|EEE99260.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/316 (85%), Positives = 302/316 (95%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI+ LRTKQKEIDGL+SL+ EC EDKDMLDMA EEL  A++EEKRLQ+LLLKSLLP+D
Sbjct: 43  MELITYLRTKQKEIDGLRSLMTECPEDKDMLDMANEELSQAMEEEKRLQNLLLKSLLPRD 102

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           DADERDCILEVRAG+GGEEASLFA+D+FKMYER+SQ  GWKFEVV +TESDL+GYKEASA
Sbjct: 103 DADERDCILEVRAGSGGEEASLFAMDIFKMYERFSQNNGWKFEVVYITESDLKGYKEASA 162

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           AISG  V+GKLKFESGIHRVQRVP+TEK GRVHTSAVSVAILPQADEVD++LRNEDLRID
Sbjct: 163 AISGADVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDLQLRNEDLRID 222

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQHANTTNSAVR+TH+PTG+T+SIQDERSQHMNK+KALKVLCAKLYEMERSR
Sbjct: 223 TYRSGGSGGQHANTTNSAVRITHLPTGITVSIQDERSQHMNKSKALKVLCAKLYEMERSR 282

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+SRS+LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I+D+M+GE+LD+FIDAL
Sbjct: 283 LHMSRSRLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSINDVMQGESLDVFIDAL 342

Query: 301 LLQQEMDAIASFGSTQ 316
           LLQQEMDAIASFGS +
Sbjct: 343 LLQQEMDAIASFGSIE 358


>gi|225437801|ref|XP_002274067.1| PREDICTED: peptide chain release factor 1 [Vitis vinifera]
 gi|297744098|emb|CBI37068.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 271/309 (87%), Positives = 295/309 (95%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I+ELR KQKEIDGLKSL+ ECSEDKDML+MA EEL  A +EEKRLQ+LLLKSLLPKD+AD
Sbjct: 73  ITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAEEEKRLQNLLLKSLLPKDEAD 132

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKFEVV +TESDL+GYKEAS AIS
Sbjct: 133 ERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAIS 192

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GVYGKLKFESGIHRVQRVP+TEKSGRVHTSAVSVAILPQADEVDV+LRNEDLRIDTYR
Sbjct: 193 GSGVYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRIDTYR 252

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           SGGSGGQHANTTNSAVR+THIP+GMT++IQDERSQHMNKAKALKVLCAKLYE+ERSRI  
Sbjct: 253 SGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQK 312

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RSKLR EQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+++D+M+GENLD+FIDALLLQ
Sbjct: 313 DRSKLRMEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQ 372

Query: 304 QEMDAIASF 312
           QEMDAIASF
Sbjct: 373 QEMDAIASF 381


>gi|449435146|ref|XP_004135356.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
 gi|449503299|ref|XP_004161933.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
          Length = 426

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/312 (83%), Positives = 294/312 (94%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M+LI+ELR+KQKEI+GL++L+ E SED+DM DMATEEL  A++EEKRLQ  LLKSLLP+D
Sbjct: 109 MNLITELRSKQKEINGLRTLMEESSEDRDMFDMATEELEQAVEEEKRLQQFLLKSLLPRD 168

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           DADERD ILEVRAGTGG+EASLFA+D+FKMYERY+QKKGWKFEVV +TESDL+GYKEA A
Sbjct: 169 DADERDSILEVRAGTGGDEASLFAMDIFKMYERYAQKKGWKFEVVDITESDLKGYKEAIA 228

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           AISG GVYG+LKFESGIHRVQRVP+TEK+GRVHTSA+SVAILPQADEVDV L+NEDLRID
Sbjct: 229 AISGAGVYGRLKFESGIHRVQRVPVTEKAGRVHTSAISVAILPQADEVDVELKNEDLRID 288

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T+RSGGSGGQHANTTNSAVRV H+PTG+T++IQDERSQHMNKAKALK++CAKLYEMER R
Sbjct: 289 TFRSGGSGGQHANTTNSAVRVIHVPTGLTVTIQDERSQHMNKAKALKLICAKLYEMERRR 348

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I  SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGIT H+I ++M+GENLDIF+DAL
Sbjct: 349 IQSSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITDHSIEEVMQGENLDIFVDAL 408

Query: 301 LLQQEMDAIASF 312
           LLQQEMDAIASF
Sbjct: 409 LLQQEMDAIASF 420


>gi|42569997|ref|NP_182225.3| Peptide chain release factor 1 [Arabidopsis thaliana]
 gi|124301088|gb|ABN04796.1| At2g47020 [Arabidopsis thaliana]
 gi|330255695|gb|AEC10789.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 413

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/315 (83%), Positives = 295/315 (93%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI++LR KQKEIDGLKSL+ E S+DKDMLD+A  EL  A++EEKRLQ+LLLKSLLPKD
Sbjct: 98  MLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKD 157

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+F+MYERYSQKKGWKF++V +TESD++GYKEASA
Sbjct: 158 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 217

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           AI G  VYGKLKFESGIHRVQR+P+TEKSGR+HTSA+SVAILPQADEVDV+LRNEDLRID
Sbjct: 218 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRID 277

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQHANTTNSAVR+ H+PTGM +SIQDERSQHMN+AKALKVLCA+LYE+ER R
Sbjct: 278 TYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLR 337

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I  SRSKLRS+QIGSGDRS RIRTYNFPQGRVTDHRVGITHHAI DMM+GENLD+FIDAL
Sbjct: 338 IQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDAL 397

Query: 301 LLQQEMDAIASFGST 315
           LL+QEMDAIASF ST
Sbjct: 398 LLRQEMDAIASFSST 412


>gi|356503962|ref|XP_003520768.1| PREDICTED: peptide chain release factor 1-like [Glycine max]
          Length = 415

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 260/314 (82%), Positives = 296/314 (94%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           LI ELR KQKEIDGLKSL+ ECSEDKDML+MATEE+  A++EE++LQ+LLLKSLLPKDDA
Sbjct: 102 LIKELRAKQKEIDGLKSLMAECSEDKDMLNMATEEMGQAVEEERKLQNLLLKSLLPKDDA 161

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DERDCILEVRAGTGGEEASLFA+D+F+MYE+Y+ +KGWKFEVV + +SD +GYKEASAAI
Sbjct: 162 DERDCILEVRAGTGGEEASLFAMDIFRMYEKYALEKGWKFEVVDIAQSDHKGYKEASAAI 221

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ KLKFESGIHRVQRVP+TEKSGR+HTSAVSVAILPQADEVDV+L+NEDLRIDTY
Sbjct: 222 AGDGVFRKLKFESGIHRVQRVPVTEKSGRIHTSAVSVAILPQADEVDVQLKNEDLRIDTY 281

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RSGGSGGQHANTTNSAVRVTHIPTG+ I+IQDERSQHMNKAKALKVLCAKLYEMER R+ 
Sbjct: 282 RSGGSGGQHANTTNSAVRVTHIPTGIMITIQDERSQHMNKAKALKVLCAKLYEMERLRLR 341

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            SRSKLR EQIGSGDRSERIRTYNFPQGRVTDHRVGIT+H++ D+M+GENLD+FIDALLL
Sbjct: 342 SSRSKLRLEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSVDDVMQGENLDVFIDALLL 401

Query: 303 QQEMDAIASFGSTQ 316
           Q+EMDA+A+F S+Q
Sbjct: 402 QEEMDAMATFSSSQ 415


>gi|297828437|ref|XP_002882101.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327940|gb|EFH58360.1| hypothetical protein ARALYDRAFT_904175 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 410

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/315 (82%), Positives = 291/315 (92%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI++LR KQKEIDGLKSL+ E S+DKDMLDMA  EL  A++EEKRLQ+LLLKSLLPKD
Sbjct: 95  MFLINDLRAKQKEIDGLKSLVSESSDDKDMLDMAVSELDEAVEEEKRLQTLLLKSLLPKD 154

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+F+MYERYSQKK WKF++V +TESD++GYKEASA
Sbjct: 155 EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKAWKFDIVDITESDMKGYKEASA 214

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           AI G  VYGKLKFESGIHRVQR+P+TEKSGR+HTSA+SVAILPQADEVDV+LRNEDLRID
Sbjct: 215 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRID 274

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQHANTTNSAVR+ H+PTGM +SIQDERSQHMN+AKALKVLCA+LYE+ER R
Sbjct: 275 TYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLR 334

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I  SRSKLRS+QIGSGDRS RIRTYNFPQGRVTDHRVGIT HAI DMM+GE LD FIDAL
Sbjct: 335 IQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITLHAIEDMMQGEILDSFIDAL 394

Query: 301 LLQQEMDAIASFGST 315
           LL+QEMDAIASF ST
Sbjct: 395 LLRQEMDAIASFSST 409


>gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana]
          Length = 395

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 263/340 (77%), Positives = 295/340 (86%), Gaps = 25/340 (7%)

Query: 1   MHLISELRTKQK-------------------------EIDGLKSLIYECSEDKDMLDMAT 35
           M LI++LR KQK                         EIDGLKSL+ E S+DKDMLD+A 
Sbjct: 55  MLLINDLRAKQKVVNLLYRIIYLFQRSSLIRFTFCWQEIDGLKSLVSESSDDKDMLDLAV 114

Query: 36  EELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYS 95
            EL  A++EEKRLQ+LLLKSLLPKD+ADERDCILEVRAGTGGEEASLFA+D+F+MYERYS
Sbjct: 115 GELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEVRAGTGGEEASLFAMDIFRMYERYS 174

Query: 96  QKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTS 155
           QKKGWKF++V +TESD++GYKEASAAI G  VYGKLKFESGIHRVQR+P+TEKSGR+HTS
Sbjct: 175 QKKGWKFDIVDITESDMKGYKEASAAICGASVYGKLKFESGIHRVQRIPITEKSGRIHTS 234

Query: 156 AVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDE 215
           A+SVAILPQADEVDV+LRNEDLRIDTYRSGGSGGQHANTTNSAVR+ H+PTGM +SIQDE
Sbjct: 235 AISVAILPQADEVDVQLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDE 294

Query: 216 RSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDH 275
           RSQHMN+AKALKVLCA+LYE+ER RI  SRSKLRS+QIGSGDRS RIRTYNFPQGRVTDH
Sbjct: 295 RSQHMNRAKALKVLCARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNFPQGRVTDH 354

Query: 276 RVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           RVGITHHAI DMM+GENLD+FIDALLL+QEMDAIASF ST
Sbjct: 355 RVGITHHAIEDMMQGENLDMFIDALLLRQEMDAIASFSST 394


>gi|218196470|gb|EEC78897.1| hypothetical protein OsI_19275 [Oryza sativa Indica Group]
 gi|222630945|gb|EEE63077.1| hypothetical protein OsJ_17885 [Oryza sativa Japonica Group]
          Length = 368

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/314 (78%), Positives = 280/314 (89%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M +I ELR+KQ+EI+GLKSL+    E+KD  +MA +EL  A++EEK+LQ  L +SLLPKD
Sbjct: 55  MDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKD 114

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKF+ + + ES L+GYKEAS 
Sbjct: 115 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASG 174

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G YGKLKFESGIHRVQRVP+TEKSGRVHTSAVSVAILPQADEVDV+LRNEDLRID
Sbjct: 175 TISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRID 234

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+TH+PTG  ++IQDERSQH NKAKALKVL A+LYE+ER R
Sbjct: 235 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 294

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I D+MEGE+LDIFIDAL
Sbjct: 295 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDAL 354

Query: 301 LLQQEMDAIASFGS 314
           LL+ EMDAIASF S
Sbjct: 355 LLRYEMDAIASFAS 368


>gi|48926665|gb|AAT47454.1| putative peptide chain release factor [Oryza sativa Japonica Group]
          Length = 350

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/314 (78%), Positives = 280/314 (89%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M +I ELR+KQ+EI+GLKSL+    E+KD  +MA +EL  A++EEK+LQ  L +SLLPKD
Sbjct: 37  MDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKD 96

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKF+ + + ES L+GYKEAS 
Sbjct: 97  EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASG 156

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G YGKLKFESGIHRVQRVP+TEKSGRVHTSAVSVAILPQADEVDV+LRNEDLRID
Sbjct: 157 TISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRID 216

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+TH+PTG  ++IQDERSQH NKAKALKVL A+LYE+ER R
Sbjct: 217 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 276

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I D+MEGE+LDIFIDAL
Sbjct: 277 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDAL 336

Query: 301 LLQQEMDAIASFGS 314
           LL+ EMDAIASF S
Sbjct: 337 LLRYEMDAIASFAS 350


>gi|115462961|ref|NP_001055080.1| Os05g0277300 [Oryza sativa Japonica Group]
 gi|113578631|dbj|BAF16994.1| Os05g0277300, partial [Oryza sativa Japonica Group]
          Length = 349

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/314 (78%), Positives = 280/314 (89%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M +I ELR+KQ+EI+GLKSL+    E+KD  +MA +EL  A++EEK+LQ  L +SLLPKD
Sbjct: 36  MDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKD 95

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKF+ + + ES L+GYKEAS 
Sbjct: 96  EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASG 155

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G YGKLKFESGIHRVQRVP+TEKSGRVHTSAVSVAILPQADEVDV+LRNEDLRID
Sbjct: 156 TISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRID 215

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+TH+PTG  ++IQDERSQH NKAKALKVL A+LYE+ER R
Sbjct: 216 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 275

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I D+MEGE+LDIFIDAL
Sbjct: 276 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDAL 335

Query: 301 LLQQEMDAIASFGS 314
           LL+ EMDAIASF S
Sbjct: 336 LLRYEMDAIASFAS 349


>gi|215764957|dbj|BAG86654.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 314

 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 245/314 (78%), Positives = 280/314 (89%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M +I ELR+KQ+EI+GLKSL+    E+KD  +MA +EL  A++EEK+LQ  L +SLLPKD
Sbjct: 1   MDMIEELRSKQEEIEGLKSLMTNSVEEKDFREMAAQELLQALEEEKQLQHKLFRSLLPKD 60

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKF+ + + ES L+GYKEAS 
Sbjct: 61  EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDAIDIMESALKGYKEASG 120

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G YGKLKFESGIHRVQRVP+TEKSGRVHTSAVSVAILPQADEVDV+LRNEDLRID
Sbjct: 121 TISGPGAYGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAILPQADEVDVQLRNEDLRID 180

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+TH+PTG  ++IQDERSQH NKAKALKVL A+LYE+ER R
Sbjct: 181 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEIERHR 240

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I D+MEGE+LDIFIDAL
Sbjct: 241 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDIFIDAL 300

Query: 301 LLQQEMDAIASFGS 314
           LL+ EMDAIASF S
Sbjct: 301 LLRYEMDAIASFAS 314


>gi|242089427|ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
 gi|241945831|gb|EES18976.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
          Length = 416

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/314 (77%), Positives = 285/314 (90%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI ELR+K++EI+GLKSL+    E+KDM +MA EEL  A++ EKRLQ  L +SLLPKD
Sbjct: 103 MELIKELRSKREEIEGLKSLVTNAREEKDMREMAAEELLEAVEVEKRLQHELFRSLLPKD 162

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+F+MYE+Y+QK GWKF+V+ + ES ++GYKEAS 
Sbjct: 163 EADERDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASG 222

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G +GKLKFESGIHRVQRVP+TEKSGRVHTSAVSVA+LPQADEVDV+LRNEDLRID
Sbjct: 223 TISGPGAFGKLKFESGIHRVQRVPVTEKSGRVHTSAVSVAVLPQADEVDVQLRNEDLRID 282

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+THIPTG  ++IQDERSQHMNKAKALKVL A+LYE+ER R
Sbjct: 283 TYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERHR 342

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I+D+MEGE+LD+F+DAL
Sbjct: 343 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIADVMEGESLDVFVDAL 402

Query: 301 LLQQEMDAIASFGS 314
           LLQ+EMDAIASFG+
Sbjct: 403 LLQEEMDAIASFGA 416


>gi|413917590|gb|AFW57522.1| peptide chain release factor 1 [Zea mays]
          Length = 368

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/314 (77%), Positives = 286/314 (91%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI +LR+KQ+EI+GLKSL+    E+KDM +MA EEL +A++EEKRLQ  L +SLLPKD
Sbjct: 55  MELIKDLRSKQEEIEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKD 114

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADE+DCILEVRAGTGGEEASLFA+D+F+MYE+Y+QK GWKF+V+ + ES ++GYKEAS 
Sbjct: 115 EADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASG 174

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G +GKLKFESGIHRVQRVP TEKSGR+HTSAVSVA+LPQADEVDV+LRNEDLRID
Sbjct: 175 TISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRID 234

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+THIPTG  ++IQDERSQHMNKAKALKVL A+LYE+ER R
Sbjct: 235 TYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRR 294

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVG+THH+I+D+MEGE+LD+F+DAL
Sbjct: 295 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDAL 354

Query: 301 LLQQEMDAIASFGS 314
           LLQ+EMDAIASFG+
Sbjct: 355 LLQEEMDAIASFGA 368


>gi|363543169|ref|NP_001241798.1| peptide chain release factor 1 [Zea mays]
 gi|195650889|gb|ACG44912.1| peptide chain release factor 1 [Zea mays]
          Length = 356

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 241/314 (76%), Positives = 286/314 (91%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI +LR+KQ+EI+GLKSL+    E+KDM +MA EEL +A++EEKRLQ  L +SLLPKD
Sbjct: 43  MELIKDLRSKQEEIEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKD 102

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADE+DCILEVRAGTGGEEASLFA+D+F+MYE+Y+QK GWKF+V+ + ES ++GYKEAS 
Sbjct: 103 EADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASG 162

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G +GKLKFESGIHRVQRVP TEKSGR+HTSAVSVA+LPQADEVDV+LRNEDLRID
Sbjct: 163 TISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRID 222

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+THIPTG  ++IQDERSQHMNKAKALKVL A+LYE+ER R
Sbjct: 223 TYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRR 282

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVG+THH+I+D+MEGE+LD+F+DAL
Sbjct: 283 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDAL 342

Query: 301 LLQQEMDAIASFGS 314
           LLQ+EMDAI+SFG+
Sbjct: 343 LLQEEMDAISSFGA 356


>gi|226492409|ref|NP_001142228.1| uncharacterized protein LOC100274396 [Zea mays]
 gi|194707706|gb|ACF87937.1| unknown [Zea mays]
 gi|413917591|gb|AFW57523.1| peptide chain release factor 1 [Zea mays]
          Length = 416

 Score =  502 bits (1292), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/314 (77%), Positives = 286/314 (91%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI +LR+KQ+EI+GLKSL+    E+KDM +MA EEL +A++EEKRLQ  L +SLLPKD
Sbjct: 103 MELIKDLRSKQEEIEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKD 162

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADE+DCILEVRAGTGGEEASLFA+D+F+MYE+Y+QK GWKF+V+ + ES ++GYKEAS 
Sbjct: 163 EADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASG 222

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G +GKLKFESGIHRVQRVP TEKSGR+HTSAVSVA+LPQADEVDV+LRNEDLRID
Sbjct: 223 TISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRID 282

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+THIPTG  ++IQDERSQHMNKAKALKVL A+LYE+ER R
Sbjct: 283 TYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRR 342

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVG+THH+I+D+MEGE+LD+F+DAL
Sbjct: 343 LHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDAL 402

Query: 301 LLQQEMDAIASFGS 314
           LLQ+EMDAIASFG+
Sbjct: 403 LLQEEMDAIASFGA 416


>gi|357134763|ref|XP_003568985.1| PREDICTED: peptide chain release factor 1-like [Brachypodium
           distachyon]
          Length = 417

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 247/314 (78%), Positives = 281/314 (89%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI EL++KQKEI+GLKSL+    E+KDM +MA EEL  AI+EEK+LQ  L ++LLPKD
Sbjct: 104 MELIKELQSKQKEIEGLKSLVTNSVEEKDMREMAAEELLEAIEEEKQLQHGLFRTLLPKD 163

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKF+V+ + ES  +GYKEAS 
Sbjct: 164 EADERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDVLDLMESVSKGYKEASG 223

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G YGKLKFESG+HRVQRVP+TEKSGRVHTSAVSVA+LPQADEVDV+LRNEDLRID
Sbjct: 224 TISGPGAYGKLKFESGVHRVQRVPVTEKSGRVHTSAVSVAVLPQADEVDVQLRNEDLRID 283

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQ  NTT+SAVR+TH+PTG  ++IQDERSQH NKAKALKVL A+LYEMER R
Sbjct: 284 TYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEMERHR 343

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H  RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+I D+MEGE+LD+FIDAL
Sbjct: 344 LHADRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDVFIDAL 403

Query: 301 LLQQEMDAIASFGS 314
           LLQ+EMDAIASF S
Sbjct: 404 LLQEEMDAIASFTS 417


>gi|147818957|emb|CAN67129.1| hypothetical protein VITISV_040170 [Vitis vinifera]
          Length = 1542

 Score =  492 bits (1267), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 249/313 (79%), Positives = 271/313 (86%), Gaps = 26/313 (8%)

Query: 4    ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            I+ELR KQKEIDGLKSL+ ECSEDKDML+MA EEL  A  EEKRLQ+LLLKSLLPKD+AD
Sbjct: 1256 ITELRNKQKEIDGLKSLMAECSEDKDMLNMAAEELGQAAGEEKRLQNLLLKSLLPKDEAD 1315

Query: 64   ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            ERDCILEVRAGTGGEEASLFA+D+FKMYE+YSQK GWKFEVV +TESDL+GYKEAS AIS
Sbjct: 1316 ERDCILEVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFEVVDITESDLKGYKEASGAIS 1375

Query: 124  GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
            G GVYGKLKFESGIHRVQ                          VDV+LRNEDLRIDTYR
Sbjct: 1376 GSGVYGKLKFESGIHRVQ--------------------------VDVQLRNEDLRIDTYR 1409

Query: 184  SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
            SGGSGGQHANTTNSAVR+THIP+GMT++IQDERSQHMNKAKALKVLCAKLYE+ERSRI  
Sbjct: 1410 SGGSGGQHANTTNSAVRITHIPSGMTVAIQDERSQHMNKAKALKVLCAKLYEIERSRIQK 1469

Query: 244  SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
             RSKLR EQIGSGDRSERIRTYNFPQGRVTDHRVGITHH+++D+M+GENLD+FIDALLLQ
Sbjct: 1470 DRSKLRMEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSVNDVMQGENLDVFIDALLLQ 1529

Query: 304  QEMDAIASFGSTQ 316
            QEMDAIASF STQ
Sbjct: 1530 QEMDAIASFSSTQ 1542


>gi|224035189|gb|ACN36670.1| unknown [Zea mays]
          Length = 301

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 233/301 (77%), Positives = 275/301 (91%)

Query: 14  IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           ++GLKSL+    E+KDM +MA EEL +A++EEKRLQ  L +SLLPKD+ADE+DCILEVRA
Sbjct: 1   MEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRA 60

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           GTGGEEASLFA+D+F+MYE+Y+QK GWKF+V+ + ES ++GYKEAS  ISG G +GKLKF
Sbjct: 61  GTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKF 120

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 193
           ESGIHRVQRVP TEKSGR+HTSAVSVA+LPQADEVDV+LRNEDLRIDTYRSGGSGGQ  N
Sbjct: 121 ESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGGQSVN 180

Query: 194 TTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQI 253
           TT+SAVR+THIPTG  ++IQDERSQHMNKAKALKVL A+LYE+ER R+H+ RSKLRSEQI
Sbjct: 181 TTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQI 240

Query: 254 GSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           GSGDRSERIRTYNFPQGRVTDHRVG+THH+I+D+MEGE+LD+F+DALLLQ+EMDAIASFG
Sbjct: 241 GSGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAIASFG 300

Query: 314 S 314
           +
Sbjct: 301 A 301


>gi|357511537|ref|XP_003626057.1| Peptide chain release factor [Medicago truncatula]
 gi|355501072|gb|AES82275.1| Peptide chain release factor [Medicago truncatula]
          Length = 526

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/369 (66%), Positives = 290/369 (78%), Gaps = 57/369 (15%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            +++RT+  EIDGLKSL+ E SEDKDML+MATEE+  AI+EE++LQ+LLLKSLLPKDDAD
Sbjct: 157 FTQVRTRDLEIDGLKSLMNESSEDKDMLNMATEEMGQAIEEERKLQNLLLKSLLPKDDAD 216

Query: 64  ERDCILEVRAG-----------TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDL 112
           ERDCILEVRAG           TGGEEASLFA+++FKMYE+Y+  KGWKF+VV + +SD+
Sbjct: 217 ERDCILEVRAGKLSLLKMEIYCTGGEEASLFAMNIFKMYEKYAHNKGWKFDVVDIAQSDM 276

Query: 113 RGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRL 172
           +G+KEA+AAI GVGV+GKLKFESGIHRVQRVP+TEK GRVHTSAVSVAILPQADEVDV+L
Sbjct: 277 KGFKEATAAILGVGVFGKLKFESGIHRVQRVPVTEKLGRVHTSAVSVAILPQADEVDVQL 336

Query: 173 RNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHM------------ 220
           + EDL+ID YRSGGSGGQHAN T+SAVR+THIPTG+ I+IQDERSQHM            
Sbjct: 337 KKEDLKIDFYRSGGSGGQHANKTSSAVRMTHIPTGIVIAIQDERSQHMVNYSKMAQCTCN 396

Query: 221 ----------------------------------NKAKALKVLCAKLYEMERSRIHLSRS 246
                                             NKAKALKVLCAKLYE+ER+R+H SRS
Sbjct: 397 FFYSEEGRQLRTWCTTLHVHWICVHSYVWCSYHLNKAKALKVLCAKLYEIERTRLHSSRS 456

Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEM 306
           KLRS+QIGSGDRSERIRTYNFPQGRVTDHRVGIT+H I D+M+GE+LD FIDALLL++EM
Sbjct: 457 KLRSDQIGSGDRSERIRTYNFPQGRVTDHRVGITYHNIDDVMQGESLDAFIDALLLKEEM 516

Query: 307 DAIASFGST 315
           DAIA+F S+
Sbjct: 517 DAIATFRSS 525


>gi|413917589|gb|AFW57521.1| hypothetical protein ZEAMMB73_731523 [Zea mays]
          Length = 285

 Score =  469 bits (1208), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 216/269 (80%), Positives = 250/269 (92%)

Query: 46  KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 105
           KRLQ  L +SLLPKD+ADE+DCILEVRAGTGGEEASLFA+D+F+MYE+Y+QK GWKF+V+
Sbjct: 17  KRLQHELFRSLLPKDEADEKDCILEVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVI 76

Query: 106 GVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQA 165
            + ES ++GYKEAS  ISG G +GKLKFESGIHRVQRVP TEKSGR+HTSAVSVA+LPQA
Sbjct: 77  DIMESAVKGYKEASGTISGPGAFGKLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQA 136

Query: 166 DEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKA 225
           DEVDV+LRNEDLRIDTYRSGGSGGQ  NTT+SAVR+THIPTG  ++IQDERSQHMNKAKA
Sbjct: 137 DEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKA 196

Query: 226 LKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAIS 285
           LKVL A+LYE+ER R+H+ RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVG+THH+I+
Sbjct: 197 LKVLRARLYELERRRLHMDRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGVTHHSIA 256

Query: 286 DMMEGENLDIFIDALLLQQEMDAIASFGS 314
           D+MEGE+LD+F+DALLLQ+EMDAIASFG+
Sbjct: 257 DVMEGESLDMFVDALLLQEEMDAIASFGA 285


>gi|168056816|ref|XP_001780414.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668174|gb|EDQ54787.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 362

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 218/316 (68%), Positives = 268/316 (84%), Gaps = 2/316 (0%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEEL-CLAIDEEKRLQSLLLKSLLPK 59
           M  I+ L+  +KEI+GLK LI E +ED+DM   A EEL  ++  E + LQ +LL  +LPK
Sbjct: 47  MACITSLKNTRKEIEGLKMLIEESAEDEDMKQAAAEELRSVSNLETEDLQRMLLL-MLPK 105

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+AD R CILEVRAGTGG+EASLFA D+F+MYERY+QKK W FEV+ +T+++ +GYKEAS
Sbjct: 106 DEADSRGCILEVRAGTGGDEASLFASDIFRMYERYAQKKLWSFEVLSITQTNSKGYKEAS 165

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A+I+G GVYGKLKFESG+HRVQRVP+TEKSGRVHTSA SVA+LPQADEVDV++RNEDLRI
Sbjct: 166 ASITGDGVYGKLKFESGVHRVQRVPVTEKSGRVHTSAASVAVLPQADEVDVQMRNEDLRI 225

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DTYR+GG+GGQHANTT+SAVRVTH+PTG+ I+IQDERSQHMN+AK+LK+L AKL+E ER 
Sbjct: 226 DTYRAGGAGGQHANTTSSAVRVTHLPTGIVIAIQDERSQHMNRAKSLKLLRAKLFERERM 285

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           +  ++RS LR EQIGSGDRSERIRTYNFPQGRVTDHRV IT H+I  +M+GE LD FIDA
Sbjct: 286 QQAMARSTLRLEQIGSGDRSERIRTYNFPQGRVTDHRVNITQHSIVQIMQGEGLDGFIDA 345

Query: 300 LLLQQEMDAIASFGST 315
           L ++QE+ A+AS  +T
Sbjct: 346 LTMKQEIAALASLKAT 361


>gi|356571023|ref|XP_003553681.1| PREDICTED: LOW QUALITY PROTEIN: peptide chain release factor 1-like
           [Glycine max]
          Length = 379

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/318 (69%), Positives = 258/318 (81%), Gaps = 16/318 (5%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           LI ELR KQKEIDGLKSLI ECSEDKDML+MATEE+  A++EE+RLQ+ LLKSLLPKDDA
Sbjct: 74  LIKELRGKQKEIDGLKSLIAECSEDKDMLNMATEEIGQAVEEERRLQNFLLKSLLPKDDA 133

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D+RDCILEVR GTGGEEASLFA+D+F+MYE+Y+ K GWKFEVV + +SDL+GY EASAAI
Sbjct: 134 DDRDCILEVRPGTGGEEASLFAMDIFRMYEKYALKNGWKFEVVDIAQSDLKGYNEASAAI 193

Query: 123 SGVGVYGKLKFESGIHRVQ--RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           +GVGV+GKLKFESGIHRVQ  R+ +TEKSG ++T+AVSVAILPQADEVDV+L++EDLRID
Sbjct: 194 AGVGVFGKLKFESGIHRVQSLRILVTEKSGCINTNAVSVAILPQADEVDVQLKHEDLRID 253

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRSGGSGGQHANTTNSAVRVTHIPTG  I+IQDE SQHM  A   K L  K     R  
Sbjct: 254 TYRSGGSGGQHANTTNSAVRVTHIPTGTMITIQDECSQHM--ASVSKYLARKACLWWRLE 311

Query: 241 IHLSRSK--LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
           +H S     L S  +  G          FPQGRVTDH VGIT+H++ D+M+GENL  FID
Sbjct: 312 LHFSLQTFCLSSPLLILG---------FFPQGRVTDHTVGITYHSVDDVMQGENL-XFID 361

Query: 299 ALLLQQEMDAIASFGSTQ 316
           ALLLQ+EMDA+A+F S+Q
Sbjct: 362 ALLLQEEMDAMATFSSSQ 379


>gi|302785656|ref|XP_002974599.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
 gi|300157494|gb|EFJ24119.1| hypothetical protein SELMODRAFT_101651 [Selaginella moellendorffii]
          Length = 386

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/311 (61%), Positives = 241/311 (77%), Gaps = 8/311 (2%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +I  LR K+KE+ GLK L+ E  ED++M  +A+ EL  A  E +  Q  +L  L+PKD+A
Sbjct: 64  MIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLKLIPKDEA 123

Query: 63  DERDCILEVRA--------GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           D R CILE           G GG+EAS+FA D+FKMYE+Y+    W+FEV+ +T +D RG
Sbjct: 124 DSRGCILEASCLICFIYLLGAGGDEASIFASDLFKMYEKYAANNSWRFEVLSITTTDTRG 183

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           YKEASA ISG  VYG LKFESG+HRVQRVP+TEK+GR+HTS  SVAILP+A+EVDV +RN
Sbjct: 184 YKEASAVISGDDVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRN 243

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           ++++IDTYR+GG+GGQH NTT SAVRVTH PTG+ ++IQDERSQH NKAKAL +L A+LY
Sbjct: 244 DEIKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLY 303

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           E+ERSR   SRS+LR +QIGS DRSERIRTYNFPQGRVTDHRVG+T H+I  +MEG  L+
Sbjct: 304 ELERSRAAASRSELRQDQIGSSDRSERIRTYNFPQGRVTDHRVGVTQHSIEQIMEGIGLE 363

Query: 295 IFIDALLLQQE 305
           IF++AL +Q E
Sbjct: 364 IFVNALKMQHE 374


>gi|302759755|ref|XP_002963300.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
 gi|300168568|gb|EFJ35171.1| hypothetical protein SELMODRAFT_405078 [Selaginella moellendorffii]
          Length = 509

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 186/303 (61%), Positives = 237/303 (78%), Gaps = 8/303 (2%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +I  LR K+KE+ GLK L+ E  ED++M  +A+ EL  A  E +  Q  +L  L+PKD+A
Sbjct: 1   MIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEA 60

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R        G GG+EAS+FA D+FKMY++Y+    W+FEV+ +T +D RGYKEASAAI
Sbjct: 61  DSR--------GAGGDEASIFASDLFKMYDKYAANNSWRFEVLSITTTDTRGYKEASAAI 112

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GVYG LKFESG+HRVQRVP+TEK+GR+HTS  SVAILP+A+E+DV +RN++++IDTY
Sbjct: 113 SGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEIDVEIRNDEIKIDTY 172

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+GG+GGQH NTT SAVRVTH PTG+ ++IQDERSQH NKAKAL +L A+LYE+ERSR  
Sbjct: 173 RAGGAGGQHVNTTCSAVRVTHTPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAV 232

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            SRS+LR +QIGS DRSERIRTYNFPQGRVTDHRVG+T HAI  +MEG ++D +I  L  
Sbjct: 233 ASRSELRQDQIGSSDRSERIRTYNFPQGRVTDHRVGVTQHAIEQIMEGIDVDNWIPHLFE 292

Query: 303 QQE 305
           +Q+
Sbjct: 293 RQD 295


>gi|302759765|ref|XP_002963305.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
 gi|300168573|gb|EFJ35176.1| hypothetical protein SELMODRAFT_405087 [Selaginella moellendorffii]
          Length = 927

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 183/292 (62%), Positives = 230/292 (78%), Gaps = 8/292 (2%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +I  LR K+KE+ GLK L+ E  ED++M  +A+ EL  A  E +  Q  +L  L+PKD+A
Sbjct: 64  MIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEA 123

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R        G GG+EAS+FA D+FKMYE+Y+    W+FEV+ +T +D RGYKEASA I
Sbjct: 124 DSR--------GAGGDEASIFASDLFKMYEKYTANNSWRFEVLSITTTDTRGYKEASAVI 175

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GVYG LKFESG+HRVQRVP+TEK+GR+HTS  SVAILP+A+EVDV +RN++++IDTY
Sbjct: 176 SGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRNDEIKIDTY 235

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+GG+GGQH NTT SAVRVTH PTG+ ++IQDERSQH NKAKAL +L A+LYE+ERSR  
Sbjct: 236 RAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAA 295

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
            SRS+LR +QIGS DRSERIRTYNFPQGRVTDH+VG+T HAI  +MEG ++D
Sbjct: 296 ASRSELRQDQIGSSDRSERIRTYNFPQGRVTDHQVGVTQHAIEQIMEGIDVD 347


>gi|302811530|ref|XP_002987454.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
 gi|300144860|gb|EFJ11541.1| hypothetical protein SELMODRAFT_426218 [Selaginella moellendorffii]
          Length = 505

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/294 (61%), Positives = 230/294 (78%), Gaps = 8/294 (2%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +I  LR K+KE+ GLK L+ E  ED++M  +A+ EL  A  E +  Q  +L  L+PKD+A
Sbjct: 40  MIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEA 99

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R        G GG+EAS+FA D+FKMYE+Y+    W+FEV+ +T +D R YKEASAAI
Sbjct: 100 DSR--------GAGGDEASIFASDLFKMYEKYAANNSWRFEVLSITTTDTRCYKEASAAI 151

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GVYG LKFESG+HRVQRVP+TEK+GR+HTS  SVAILP+A+E+DV +RN++++IDTY
Sbjct: 152 SGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEIDVEIRNDEIKIDTY 211

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+GG+GGQH NTT SAVRVTH PTG+ ++IQDERSQH NKAKAL +L A+LYE+ERSR  
Sbjct: 212 RAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDERSQHKNKAKALSILYARLYELERSRAA 271

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
            SRS+LR +QIGS DRSERIRTYNFPQGRVTD RVG+T HAI  +MEG ++D +
Sbjct: 272 ASRSELRQDQIGSSDRSERIRTYNFPQGRVTDRRVGVTQHAIEQIMEGIDVDNW 325


>gi|145362209|ref|NP_973706.2| Peptide chain release factor 1 [Arabidopsis thaliana]
 gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana]
 gi|330255694|gb|AEC10788.1| Peptide chain release factor 1 [Arabidopsis thaliana]
          Length = 256

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/223 (81%), Positives = 209/223 (93%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI++LR KQKEIDGLKSL+ E S+DKDMLD+A  EL  A++EEKRLQ+LLLKSLLPKD
Sbjct: 33  MLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKD 92

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADERDCILEVRAGTGGEEASLFA+D+F+MYERYSQKKGWKF++V +TESD++GYKEASA
Sbjct: 93  EADERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDMKGYKEASA 152

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           AI G  VYGKLKFESGIHRVQR+P+TEKSGR+HTSA+SVAILPQADEVDV+LRNEDLRID
Sbjct: 153 AICGASVYGKLKFESGIHRVQRIPITEKSGRIHTSAISVAILPQADEVDVQLRNEDLRID 212

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKA 223
           TYRSGGSGGQHANTTNSAVR+ H+PTGM +SIQDERSQHM+++
Sbjct: 213 TYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQS 255


>gi|384250750|gb|EIE24229.1| protein chain release factor A [Coccomyxa subellipsoidea C-169]
          Length = 345

 Score =  365 bits (937), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 180/312 (57%), Positives = 232/312 (74%), Gaps = 13/312 (4%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           E  GL+ L     ED+DM  +A EE  +  ++   L+  LL  LLP+D+ADER  +LEVR
Sbjct: 35  EAKGLEGLT--SGEDEDMRKLAREEQQVLQEQVPALEQALLDQLLPRDEADERGAVLEVR 92

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG+EA+LFA D+F+MY+R+++ + WKFEV+ + ESD+ G+K ASA ++G G YG LK
Sbjct: 93  AGTGGDEAALFAGDLFRMYQRFAELRRWKFEVLEMAESDVGGFKLASANVAGRGAYGSLK 152

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           +ESGIHRVQRVP+TE SGRVHTSA SVA++PQADEVDV +++EDLRIDTYR+GG+GGQH 
Sbjct: 153 WESGIHRVQRVPVTESSGRVHTSAASVAVMPQADEVDVSVKDEDLRIDTYRAGGAGGQHV 212

Query: 193 NTTNSAVRVTHIPTGMTISI----------QDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           NTTNSAVR+THIP+G+ ++I          QDERSQH NKAKALK+L A+L++ +R R  
Sbjct: 213 NTTNSAVRITHIPSGLVVAIQARHLVDAWWQDERSQHKNKAKALKILRARLFDAQRQRQR 272

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFP-QGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             +S  R   IGSGDRSERIRTYNFP QGRVTDHRVG+T H I  ++ G +LD FIDAL 
Sbjct: 273 AEQSSERKGLIGSGDRSERIRTYNFPQQGRVTDHRVGLTEHGIEGVLSGASLDTFIDALS 332

Query: 302 LQQEMDAIASFG 313
              +   ++  G
Sbjct: 333 THHKQQLLSDLG 344


>gi|312115445|ref|YP_004013041.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220574|gb|ADP71942.1| peptide chain release factor 1 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 361

 Score =  361 bits (927), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 169/308 (54%), Positives = 236/308 (76%), Gaps = 1/308 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L   ++E D L+ +I + + + DM ++A EEL  A    ++L+  L   LLPKD AD
Sbjct: 49  IKTLEAAEEERDSLRQMIEDPAAEPDMAELAREELEAAEPRVEQLEHELQIMLLPKDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGGEEA+LFA D+F+MY+RY+  KGWK  V+ V+++D  G++E  A+IS
Sbjct: 109 EKSAILEVRAGTGGEEAALFAADLFRMYQRYADLKGWKVNVLSVSDADAGGFREIVASIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ ++KFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV +R +D+RIDT R
Sbjct: 169 GKGVFARMKFESGVHRVQRVPETENQGRIHTSAATVAVLPEAEEVDVEIREQDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+A+A++VL A+L++MER+RI  
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIIVT-SSEKSQHQNRARAMQVLRARLFDMERTRIDE 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R +QIGSGDRS+RIRTYNFPQGRVTDHRV +T + +  +MEGE LD  IDAL+ +
Sbjct: 288 ARAAERKDQIGSGDRSQRIRTYNFPQGRVTDHRVNVTLYNLPQIMEGEGLDTIIDALITE 347

Query: 304 QEMDAIAS 311
           ++   +A+
Sbjct: 348 RQAGQLAA 355


>gi|407783435|ref|ZP_11130636.1| peptide chain release factor 1 [Oceanibaculum indicum P24]
 gi|407202160|gb|EKE72155.1| peptide chain release factor 1 [Oceanibaculum indicum P24]
          Length = 358

 Score =  360 bits (925), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 169/309 (54%), Positives = 228/309 (73%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I+ LR  + E DGL  ++ + S D +M  MA EEL L  D    L+  +  +LLPKD+AD
Sbjct: 49  INALRAGEAERDGLVQMLADPSTDAEMKTMAEEELALLEDRLTELEQAVKIALLPKDEAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E++ ILEVRAGTGG+EA LFA ++F+MY RY+   GW+FEV+ V+E+D+ G KE  A I+
Sbjct: 109 EKNAILEVRAGTGGDEAGLFAAELFEMYRRYAALHGWRFEVMEVSENDVGGMKEGIATIT 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV + ++DLRID +R
Sbjct: 169 GANVFARLKYESGVHRVQRVPATENQGRIHTSAATVAVLPEAEEVDVHIEDKDLRIDVFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQ  NK KA+K+L ++LY++ER ++  
Sbjct: 229 ASGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQLRNKQKAMKILLSRLYDLERGKLDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H I  +M GE LD  IDAL  +
Sbjct: 289 ERSAARKSQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHKIEKVMLGEALDEVIDALTAE 348

Query: 304 QEMDAIASF 312
            + + +A  
Sbjct: 349 DQAERLAEL 357


>gi|339319955|ref|YP_004679650.1| protein chain release factor A [Candidatus Midichloria mitochondrii
           IricVA]
 gi|338226080|gb|AEI88964.1| protein chain release factor A [Candidatus Midichloria mitochondrii
           IricVA]
          Length = 359

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 167/314 (53%), Positives = 236/314 (75%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +HLI+     ++EI  L++ I E + D D  DMA EEL L  ++ +++   L  +LLPKD
Sbjct: 46  VHLINSYTQLKQEIADLEAAISEPNADIDFKDMALEELPLLQEKNEQVLHNLKLALLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             +++  ILE+RAGTGG+EA+LFA  +F+MY+RY++ K WKFE++ ++E+DL GYKEAS 
Sbjct: 106 ADNDKGAILEIRAGTGGDEAALFAYVLFRMYQRYAESKRWKFEILSISETDLEGYKEASV 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           +ISG GV+ +LK+ESG+HRVQRVP TE SGRVHTSA +VA+LP+A+EVD+ +  +DL+ID
Sbjct: 166 SISGKGVFARLKYESGVHRVQRVPETETSGRVHTSAATVAVLPEAEEVDITIEEKDLKID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YR+ G+GGQH NTT+SAVR+THIPTG+ +  QDE+SQH NKA+ALK+L A+LY+ ERS+
Sbjct: 226 VYRASGAGGQHVNTTDSAVRITHIPTGIVVCQQDEKSQHKNKARALKILRARLYDAERSK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               R+  R  Q+G+GDRSERIRTYN+PQ RVTDHR+ +T + + +++    LD FIDAL
Sbjct: 286 KEAERAASRKSQVGTGDRSERIRTYNYPQSRVTDHRINLTVYTLDEIVNEGTLDQFIDAL 345

Query: 301 LLQQEMDAIASFGS 314
           +  ++   +A   S
Sbjct: 346 IADEQSRLLAEDNS 359


>gi|344924573|ref|ZP_08778034.1| peptide chain release factor RF-1 [Candidatus Odyssella
           thessalonicensis L13]
          Length = 360

 Score =  357 bits (915), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 171/307 (55%), Positives = 231/307 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E+R  ++EI  L+++I +   D +M + A +EL    ++    +  +   LLPKD+AD
Sbjct: 49  IEEVRKTEREIQDLEAMIADKDMDAEMREFAKQELEQLKEKLPHQEHQIKILLLPKDEAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ ILEVRAGTGGEEA LFA D+F+MY+R++  +GWKFEV+ + E+ L   KEASA+I 
Sbjct: 109 ERNAILEVRAGTGGEEAGLFAADLFRMYQRFAANQGWKFEVLSLNETGLGAIKEASASIM 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +  +DL+ID YR
Sbjct: 169 GKGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEVDIHIDEKDLQIDVYR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIP+G+ ++ QDERSQH N+AKA+KVL A+LYE ER R  +
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPSGIVVTQQDERSQHKNRAKAMKVLRARLYEAERLRKEM 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  QIGSGDRSERIRTYNFPQGRVTDHR+ +T + I  +MEGE L+  I+ L+ +
Sbjct: 289 ERSANRRNQIGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDLIMEGECLNEMIEVLISE 348

Query: 304 QEMDAIA 310
            +   +A
Sbjct: 349 DQATRLA 355


>gi|154252199|ref|YP_001413023.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
 gi|171769599|sp|A7HTY3.1|RF1_PARL1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154156149|gb|ABS63366.1| peptide chain release factor 1 [Parvibaculum lavamentivorans DS-1]
          Length = 355

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 162/286 (56%), Positives = 219/286 (76%)

Query: 28  KDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 87
           +DM +MA EE+    +E  RL+  +   LLPKD AD+R+ ILEVRAGTGG+EA+LFA D+
Sbjct: 67  RDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGGDEAALFAGDL 126

Query: 88  FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 147
           F+MYERY+  +GWK E++  +E ++ GYKE  A ISG GVY KLKFESG+HRVQRVP+TE
Sbjct: 127 FRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRVQRVPVTE 186

Query: 148 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 207
             GR+HTSA +VA+LP+A+EVDV + ++DLRID YR+ G+GGQH N T SAVR+TH+PTG
Sbjct: 187 GGGRIHTSAATVAVLPEAEEVDVEIEDKDLRIDVYRASGAGGQHVNKTESAVRITHLPTG 246

Query: 208 MTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNF 267
           + ++ QDE+SQH NKA+A+++L A++++ ER R+   RS  R  Q+GSGDRSERIRTYNF
Sbjct: 247 IVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSAARKGQVGSGDRSERIRTYNF 306

Query: 268 PQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           PQ RVTDHR+ +T H +  ++EGE L   IDAL+ + +   +A+ G
Sbjct: 307 PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIAEDQAARLAAMG 352


>gi|288956982|ref|YP_003447323.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
 gi|288909290|dbj|BAI70779.1| peptide chain release factor RF-1 [Azospirillum sp. B510]
          Length = 361

 Score =  354 bits (909), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 172/314 (54%), Positives = 227/314 (72%), Gaps = 4/314 (1%)

Query: 4   ISELRTKQKEIDGLKSLIY----ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           I+EL+  + E   L  +I     +   D +M  MA EE  L       L+  +  SLLPK
Sbjct: 48  IAELKRGRAEAADLAEMIAAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPK 107

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+ADE++ ILEVRAGTGG+EA+LFA ++F+MY RY+   GW+FE + V+E+ + GYKEA+
Sbjct: 108 DEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEAT 167

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +  +DLRI
Sbjct: 168 ANITGRGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEKDLRI 227

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           D +RS G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQH NKAKALKVL A+LY+ ER+
Sbjct: 228 DVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYDRERA 287

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
               +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE LD  +DA
Sbjct: 288 EKDAARAADRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMAGEALDELVDA 347

Query: 300 LLLQQEMDAIASFG 313
           L+ + E   +A  G
Sbjct: 348 LVAEDEAARLAELG 361


>gi|148555445|ref|YP_001263027.1| peptide chain release factor 1 [Sphingomonas wittichii RW1]
 gi|166223608|sp|A5V9C3.1|RF1_SPHWW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148500635|gb|ABQ68889.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingomonas
           wittichii RW1]
          Length = 360

 Score =  353 bits (906), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 168/310 (54%), Positives = 232/310 (74%), Gaps = 6/310 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMA---TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           E+R  + E+D LK +  + + D ++  MA    EE+   + E +R  +L LK LLP+D A
Sbjct: 52  EVRRLRAELDVLKGMAEDEAGDAELRAMAIEEAEEIRARLPEAER--ALALK-LLPRDAA 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER  +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GW+ E++  + +DL GYKE  A++
Sbjct: 109 DERSAMLEIRAGTGGDEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ +LKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVDV + ++DLRID Y
Sbjct: 169 TGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVHIDDKDLRIDVY 228

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL  +LYEMER R+ 
Sbjct: 229 RSSGPGGQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLA 288

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
             R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H +S+++EG  LD  + AL+ 
Sbjct: 289 SERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLSEILEGPGLDDLVGALIA 348

Query: 303 QQEMDAIASF 312
           + E + +A  
Sbjct: 349 EDEAERLAQL 358


>gi|374293217|ref|YP_005040252.1| peptide chain release factor 1 [Azospirillum lipoferum 4B]
 gi|357425156|emb|CBS88039.1| peptide chain release factor 1 [Azospirillum lipoferum 4B]
          Length = 374

 Score =  353 bits (905), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 173/314 (55%), Positives = 228/314 (72%), Gaps = 4/314 (1%)

Query: 4   ISELRTKQKEIDGLKSLIY----ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           I+EL+  + E   L  +I     + S D +M  MA EE  L       L+  +  SLLPK
Sbjct: 61  IAELKKGRAEAADLAEMISAMMGDPSADPEMKAMAEEEFHLLAKRIPDLERKVQISLLPK 120

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+ADE++ ILEVRAGTGG+EA+LFA ++F+MY RY+   GW+FE + V+E+ + GYKEA+
Sbjct: 121 DEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEAT 180

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +  +DLRI
Sbjct: 181 ANITGRGVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEKDLRI 240

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           D +RS G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQH NKAKALKVL A+LY+ ER+
Sbjct: 241 DVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYDRERA 300

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
               +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE LD  IDA
Sbjct: 301 EKDAARAADRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMAGEALDELIDA 360

Query: 300 LLLQQEMDAIASFG 313
           L+ + E   +A  G
Sbjct: 361 LVSEDEAARLAELG 374


>gi|157827554|ref|YP_001496618.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
 gi|166223596|sp|A8GXI1.1|RF1_RICB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157802858|gb|ABV79581.1| peptide chain release factor 1 [Rickettsia bellii OSU 85-389]
          Length = 357

 Score =  352 bits (904), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 166/302 (54%), Positives = 226/302 (74%), Gaps = 1/302 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E S DK  L+M  EE+    D    L+  +  +LLPKD+AD
Sbjct: 50  IKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+E+RAGTGGEEA+LFA  +F MY+RY++ KGW+FE++ + E+ + GYKE SA+I 
Sbjct: 110 SKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VD++L  +DLRIDTYR
Sbjct: 170 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 230 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQ 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R EQIGSGDRSERIRTYNFPQGRV+DHR+ +T + I +++ G+ LD FI+AL+  
Sbjct: 290 ERANNRREQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVINGQ-LDEFIEALIAN 348

Query: 304 QE 305
            E
Sbjct: 349 DE 350


>gi|144897745|emb|CAM74609.1| peptide chain release factor RF-1 [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 352

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 166/287 (57%), Positives = 215/287 (74%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM D+A EE     +    L+  +   LLPKD+ADE++ ILEVRAGTGGEEA+LFA +
Sbjct: 65  DPDMKDLAAEEYYALKETLPGLERDVQLMLLPKDEADEKNAILEVRAGTGGEEAALFAAE 124

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MYERY+  +GW+FEV+ V E+ + G KEASA I+G GV+ +LKFESG+HRVQRVP T
Sbjct: 125 LFRMYERYASVRGWRFEVMDVNETGIGGMKEASATITGRGVFARLKFESGVHRVQRVPAT 184

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VAI+P+A+EVD+++ ++DLR D YRS GSGGQ  NTT+SAVRVTHIPT
Sbjct: 185 ESGGRIHTSAATVAIMPEAEEVDIQIDDKDLRFDVYRSQGSGGQSVNTTDSAVRVTHIPT 244

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ Q E+SQH NKA A+K+L A+LYEMER+     R+  R  Q+GSGDRSERIRTYN
Sbjct: 245 GLAVACQQEKSQHKNKATAMKLLRARLYEMERASKAAERAANRKSQVGSGDRSERIRTYN 304

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+ +T + I DMM G  LD   DAL+   + + +A   
Sbjct: 305 FPQGRVTDHRINLTLYKIDDMMNGTALDEVADALIAADQAERLAEMA 351


>gi|209965909|ref|YP_002298824.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
 gi|209959375|gb|ACJ00012.1| peptide chain release factor 1 PrfA [Rhodospirillum centenum SW]
          Length = 360

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 169/309 (54%), Positives = 229/309 (74%), Gaps = 2/309 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I+ELR  + ++  L+++     +D +M  +A +EL  A      L+  ++ +LLPKD+AD
Sbjct: 53  IAELRRARADMADLQAMAE--GDDAEMATLARDELVEADRRIPELERRIMLALLPKDEAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E++ ILEVRAGTGG+EA+LFA ++F+MY RY+  +GW+FE + V E+ L GYKEASA+I+
Sbjct: 111 EKNAILEVRAGTGGDEAALFAAELFEMYRRYAGIQGWRFETIEVNETGLGGYKEASASIT 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +  +DLRID +R
Sbjct: 171 GRNVFRRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEVDIHIEEKDLRIDVFR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S GSGGQ  NTT+SAVR+TH+PT + +  QDE+SQH NKAKALKVL A+LYE+ER R   
Sbjct: 231 SQGSGGQSVNTTDSAVRITHLPTNIVVQCQDEKSQHKNKAKALKVLRARLYEIERQRRDS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE LD  +DAL+  
Sbjct: 291 ERAASRRTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMAGEALDELVDALVAS 350

Query: 304 QEMDAIASF 312
            E + +A  
Sbjct: 351 DEAERLAEL 359


>gi|157825817|ref|YP_001493537.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
 gi|166223595|sp|A8GNQ4.1|RF1_RICAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157799775|gb|ABV75029.1| peptide chain release factor 1 [Rickettsia akari str. Hartford]
          Length = 355

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 162/302 (53%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L M  +E+ +  +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLELGFDNATLAMIEDEIHILENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER     
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  QIGSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD FI+AL+ +
Sbjct: 287 ERADSRRGQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIAE 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|91205113|ref|YP_537468.1| peptide chain release factor 1 [Rickettsia bellii RML369-C]
 gi|119361596|sp|Q1RJT5.1|RF1_RICBR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91068657|gb|ABE04379.1| Peptide chain release factor RF-1 [Rickettsia bellii RML369-C]
          Length = 357

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 165/302 (54%), Positives = 226/302 (74%), Gaps = 1/302 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E S DK  L+M  EE+    D    L+  +  +LLPKD+AD
Sbjct: 50  IKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+E+RAGTGGEEA+LFA  +F MY+RY++ KGW+FE++ + E+ + GYKE SA+I 
Sbjct: 110 SKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VD++L  +DLRIDTYR
Sbjct: 170 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 230 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQ 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R +QIGSGDRSERIRTYNFPQGRV+DHR+ +T + I +++ G+ LD FI+AL+  
Sbjct: 290 ERANNRRKQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVINGQ-LDEFIEALIAN 348

Query: 304 QE 305
            E
Sbjct: 349 DE 350


>gi|392378185|ref|YP_004985344.1| peptide chain release factor 1 [Azospirillum brasilense Sp245]
 gi|356879666|emb|CCD00592.1| peptide chain release factor 1 [Azospirillum brasilense Sp245]
          Length = 357

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 171/305 (56%), Positives = 226/305 (74%), Gaps = 6/305 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLK---SLLPKD 60
           I+EL+  + E   L  +I + + D DM  +A EE     D  +R+ +L  +   SLLPKD
Sbjct: 48  IAELKKAKAEAADLAGMIADPAGDADMKALAEEEFG---DLTRRIPALERRVQISLLPKD 104

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADE++ ILEVRAGTGG+EA+LFA ++F+MY RY+  +GW+FE + V+E+ + GYKEA A
Sbjct: 105 EADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLQGWRFETMEVSETGIGGYKEAIA 164

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I+G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +  +DLRID
Sbjct: 165 NITGRNVFARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIHIDEKDLRID 224

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            +RS G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQH NKAKALKVL A+LYE ER+ 
Sbjct: 225 VFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKALKVLRARLYERERAE 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
              +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE LD  IDAL
Sbjct: 285 KDKARAADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIEKVMAGEALDELIDAL 344

Query: 301 LLQQE 305
             + E
Sbjct: 345 TAEDE 349


>gi|254472406|ref|ZP_05085806.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
 gi|374328358|ref|YP_005078542.1| peptide chain release factor 1 [Pseudovibrio sp. FO-BEG1]
 gi|211958689|gb|EEA93889.1| peptide chain release factor 1 [Pseudovibrio sp. JE062]
 gi|359341146|gb|AEV34520.1| Peptide chain release factor 1 [Pseudovibrio sp. FO-BEG1]
          Length = 357

 Score =  350 bits (899), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 6/313 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAIDEEKRLQSLLLKSLLPKD 60
           I ELR  + +++G ++L+ +   D +M ++A    +EL   ++E   L   +   LLPKD
Sbjct: 47  IRELRKAEGDLEGAEALLSDPDSDAEMKELAQLERDELTGVVEE---LTQKVRIGLLPKD 103

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD  D ILEVRAGTGG+EA+LFA D+F+MY+R++   GWK EV+  +E D+ G+KE  A
Sbjct: 104 KADSHDVILEVRAGTGGDEAALFAGDLFRMYQRFADNNGWKVEVMSSSEGDMGGFKEIVA 163

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           A++G  V+GKLKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA+EVDV +   DLRID
Sbjct: 164 AVTGQEVFGKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPQAEEVDVDINPADLRID 223

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYR+ G+GGQH NTT+SAVR+TH PTG+ +++QDERSQH NK +A+K+L AK+Y++ER R
Sbjct: 224 TYRASGAGGQHVNTTDSAVRITHNPTGIVVAVQDERSQHKNKDRAMKLLRAKIYDVERER 283

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T + +  MM GE     IDAL
Sbjct: 284 AANERTEARRVQVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLDQMMTGEATGEVIDAL 343

Query: 301 LLQQEMDAIASFG 313
            +  + + +A+ G
Sbjct: 344 TMDHQANLLAAEG 356


>gi|347530046|ref|YP_004836794.1| peptide chain release factor 1 [Sphingobium sp. SYK-6]
 gi|345138728|dbj|BAK68337.1| peptide chain release factor 1 [Sphingobium sp. SYK-6]
          Length = 359

 Score =  350 bits (899), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 165/311 (53%), Positives = 228/311 (73%), Gaps = 10/311 (3%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +++LRT+Q E++ + +       D +M  MA EE+    +     +  L  +LLP+D AD
Sbjct: 53  VAQLRTEQSELEAMLA-------DPEMKAMAQEEIEAVRERLPEAEHALAIALLPRDAAD 105

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  +LE+RAGTGG+EA+LFA D+ +MY+RY++ +GW+ E++  + S+  G+KE  A++S
Sbjct: 106 ERAAMLEIRAGTGGDEAALFAGDLLRMYQRYAESRGWRVEIISASASEAGGFKEVIASVS 165

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE--DLRIDT 181
           G GV+ +LKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVDV++ NE  DLRID 
Sbjct: 166 GAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVQI-NEATDLRIDV 224

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH NTT+SAVR+TH+PTG+ ++ QDE+SQH NKAKALKVL A+LYE ER R 
Sbjct: 225 YRSSGAGGQHVNTTDSAVRITHLPTGIVVTQQDEKSQHKNKAKALKVLRARLYEAERERT 284

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
              ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  LD  I AL+
Sbjct: 285 QSEQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLDEMISALI 344

Query: 302 LQQEMDAIASF 312
            Q E   +A  
Sbjct: 345 AQDEAARLAQL 355


>gi|341583910|ref|YP_004764401.1| peptide chain release factor 1 [Rickettsia heilongjiangensis 054]
 gi|340808136|gb|AEK74724.1| peptide chain release factor 1 [Rickettsia heilongjiangensis 054]
          Length = 355

 Score =  350 bits (898), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKGQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  QIGSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|157828568|ref|YP_001494810.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933282|ref|YP_001650071.1| peptide chain release factor 1 [Rickettsia rickettsii str. Iowa]
 gi|378721380|ref|YP_005286267.1| peptide chain release factor 1 [Rickettsia rickettsii str.
           Colombia]
 gi|378722726|ref|YP_005287612.1| peptide chain release factor 1 [Rickettsia rickettsii str. Arizona]
 gi|378724083|ref|YP_005288967.1| peptide chain release factor 1 [Rickettsia rickettsii str. Hauke]
 gi|379016361|ref|YP_005292596.1| peptide chain release factor 1 [Rickettsia rickettsii str. Brazil]
 gi|379017869|ref|YP_005294104.1| peptide chain release factor 1 [Rickettsia rickettsii str. Hino]
 gi|379018974|ref|YP_005295208.1| peptide chain release factor 1 [Rickettsia rickettsii str. Hlp#2]
 gi|379712443|ref|YP_005300782.1| peptide chain release factor 1 [Rickettsia philipii str. 364D]
 gi|166223598|sp|A8GSC7.1|RF1_RICRS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039987|sp|B0BXT9.1|RF1_RICRO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157801049|gb|ABV76302.1| peptide chain release factor 1 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908369|gb|ABY72665.1| bacterial peptide chain release factor 1 (RF-1) [Rickettsia
           rickettsii str. Iowa]
 gi|376324885|gb|AFB22125.1| peptide chain release factor 1 [Rickettsia rickettsii str. Brazil]
 gi|376326404|gb|AFB23643.1| peptide chain release factor 1 [Rickettsia rickettsii str.
           Colombia]
 gi|376327750|gb|AFB24988.1| peptide chain release factor 1 [Rickettsia rickettsii str. Arizona]
 gi|376329088|gb|AFB26325.1| peptide chain release factor 1 [Rickettsia philipii str. 364D]
 gi|376330435|gb|AFB27671.1| peptide chain release factor 1 [Rickettsia rickettsii str. Hino]
 gi|376331554|gb|AFB28788.1| peptide chain release factor 1 [Rickettsia rickettsii str. Hlp#2]
 gi|376333098|gb|AFB30331.1| peptide chain release factor 1 [Rickettsia rickettsii str. Hauke]
          Length = 355

 Score =  349 bits (896), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 228/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ARADSRRGQVGSGDRSERIRTYNFPQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|383501663|ref|YP_005415022.1| peptide chain release factor 1 [Rickettsia australis str. Cutlack]
 gi|378932674|gb|AFC71179.1| peptide chain release factor 1 [Rickettsia australis str. Cutlack]
          Length = 355

 Score =  349 bits (896), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 226/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNTTLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 NKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER     
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|402496738|ref|YP_006555998.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Onchocerca ochengi]
 gi|398650011|emb|CCF78181.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Onchocerca ochengi]
          Length = 373

 Score =  349 bits (896), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 164/314 (52%), Positives = 234/314 (74%), Gaps = 7/314 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
           + +I E  T +KEI  LK ++ + + + D+ ++A EE    ++++K    ++++ L  +L
Sbjct: 60  IKIIDEYNTLKKEISDLKEILKDENSEYDIKELAKEEF---LEKQKVLLPKVKAKLKLAL 116

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LP D+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++K+ WKFE + ++ + + GYK
Sbjct: 117 LPTDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAEKRNWKFEPINISSTGIGGYK 176

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EASA ++G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++  +D
Sbjct: 177 EASALVNGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKD 236

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           LRID YRS G GGQ  NTT+SAVRVTH+PTG+ +  QDE+SQH NKAKA KVL A+LYE+
Sbjct: 237 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKAFKVLRARLYEI 296

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD F
Sbjct: 297 ERQKKKIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEF 356

Query: 297 IDALLLQQEMDAIA 310
           I+AL+ + E + +A
Sbjct: 357 IEALISRNEAERLA 370


>gi|338741716|ref|YP_004678678.1| peptide chain release factor 1 [Hyphomicrobium sp. MC1]
 gi|337762279|emb|CCB68114.1| peptide chain release factor 1 [Hyphomicrobium sp. MC1]
          Length = 384

 Score =  349 bits (896), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 166/311 (53%), Positives = 224/311 (72%), Gaps = 1/311 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  LR  + E   L+ +I + S DK+M+D+A  E     +    L+  L  +LLPKD AD
Sbjct: 74  IDALRKAEAESADLEQMINDPSADKEMVDLAYAERASLAERITELEQQLRIALLPKDAAD 133

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+MY RY+   GWK E++  +E+DL GYKE  A+I+
Sbjct: 134 EKSAILEVRAGTGGDEAALFAADLFRMYTRYADLHGWKTEIISASENDLGGYKEIIASIT 193

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+DV +R ED+RIDT R
Sbjct: 194 GSGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEELDVDIRPEDIRIDTMR 253

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           +GG+GGQH N T+SAVR+THIPTG+ + +  E+SQH N+  A+ VL +++YEMER R   
Sbjct: 254 AGGAGGQHVNKTDSAVRMTHIPTGIVV-VSAEKSQHQNRRLAMAVLKSRIYEMERERAAT 312

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRS+RIRTYNFPQGRVTDHR+ +T + + ++M G  LD  IDAL+  
Sbjct: 313 ERSDARKSQVGSGDRSQRIRTYNFPQGRVTDHRINLTLYNLDEVMTGNGLDELIDALITD 372

Query: 304 QEMDAIASFGS 314
            +   +A   +
Sbjct: 373 HQATMLAELSA 383


>gi|350273567|ref|YP_004884880.1| peptide chain release factor RF-1 [Rickettsia japonica YH]
 gi|348592780|dbj|BAK96741.1| peptide chain release factor RF-1 [Rickettsia japonica YH]
          Length = 355

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 226/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E+    +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELKEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKGQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  QIGSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|418055329|ref|ZP_12693384.1| Peptide chain release factor 1 [Hyphomicrobium denitrificans 1NES1]
 gi|353210911|gb|EHB76312.1| Peptide chain release factor 1 [Hyphomicrobium denitrificans 1NES1]
          Length = 359

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 164/312 (52%), Positives = 223/312 (71%), Gaps = 1/312 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  LR  + E   L+ LI + S DKDM+D+A  E          L+  L  +LLPKD AD
Sbjct: 49  IEALRKAEAESADLEQLIRDPSADKDMVDLAYAERATLASRIGELEQQLRIALLPKDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+MY RY+  KGWK EV+  +E+DL GYKE  A+I+
Sbjct: 109 EKSAILEVRAGTGGDEAALFAADLFRMYSRYADLKGWKVEVISASENDLGGYKEIIASIT 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A++V++ ++ ED+RIDT R
Sbjct: 169 GEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEDVEIDIKPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           +GG+GGQH N T SAVR+TH+PTG+ + +  E+SQH N+  A+ VL A++YE+ER +   
Sbjct: 229 AGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNRRLAMNVLKARVYELEREKAAS 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRS+RIRTYNFPQGRVTDHR+ +T + + ++M G  LD  +DAL+  
Sbjct: 288 ERSDARKSQVGSGDRSQRIRTYNFPQGRVTDHRINLTLYNLDEVMAGNGLDTLVDALITD 347

Query: 304 QEMDAIASFGST 315
            +   +A   + 
Sbjct: 348 HQATMLAELNAA 359


>gi|83592089|ref|YP_425841.1| peptide chain release factor 1 [Rhodospirillum rubrum ATCC 11170]
 gi|386348788|ref|YP_006047036.1| peptide chain release factor 1 [Rhodospirillum rubrum F11]
 gi|119361593|sp|Q2RWE1.1|RF1_RHORT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83575003|gb|ABC21554.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodospirillum
           rubrum ATCC 11170]
 gi|346717224|gb|AEO47239.1| peptide chain release factor 1 [Rhodospirillum rubrum F11]
          Length = 354

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 168/310 (54%), Positives = 231/310 (74%), Gaps = 4/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L   + E+ G ++L+    +D DM D+A EE+     E   L+  +   LLP+D+AD
Sbjct: 48  IGRLDDAKAELAGARALL----DDPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEAD 103

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R  ILEVRAGTGG+EA+LFA D+ +MYERY+Q++GW+FEV+  +++D+ G KEASAAIS
Sbjct: 104 DRGVILEVRAGTGGDEAALFAGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAAIS 163

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVDV +  +DLRIDTYR
Sbjct: 164 GRGVFARLKFESGVHRVQRVPVTEGGGRIHTSAATVAVLPEAEEVDVEIEEKDLRIDTYR 223

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SAVR+TH+P+G+    QDE+SQH NKAKA+++L  KLY+  R     
Sbjct: 224 SQGAGGQHVNTTDSAVRITHLPSGVVAQCQDEKSQHKNKAKAMRMLRTKLYDHARQTADD 283

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H + +++ G  LD  I+ L+ +
Sbjct: 284 ARAEARRVQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHRLPEVLAGTALDEVIEPLIAE 343

Query: 304 QEMDAIASFG 313
            +   +A  G
Sbjct: 344 DQATRMAEIG 353


>gi|304321558|ref|YP_003855201.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
 gi|303300460|gb|ADM10059.1| peptide chain release factor 1 [Parvularcula bermudensis HTCC2503]
          Length = 360

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 160/290 (55%), Positives = 220/290 (75%)

Query: 25  SEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           S D +M +MA EE+     + +RL++ L   LLPKD AD+   ILEVRAGTGG+EA+LFA
Sbjct: 66  STDPEMAEMAKEEIASLTGQIERLEADLQLMLLPKDKADQAPVILEVRAGTGGDEAALFA 125

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY+RY+  +GW+ E++  TES + GYKE  A +SG  V+G+LKFESG+HRVQRVP
Sbjct: 126 GDLFRMYQRYAATRGWRVEILSATESGVGGYKEIQANVSGDNVFGRLKFESGVHRVQRVP 185

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
            TE  GR+HTSA +VA+LP+ +++D+ ++  DLRID +R+ G GGQ  NTT+SAVR+THI
Sbjct: 186 ETETQGRIHTSAATVAVLPEPEDIDIDIQESDLRIDVFRASGPGGQSVNTTDSAVRITHI 245

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +S QDE+SQH N+AKA+KVL A+LYE ERSR+   R+  R  Q+GSGDRSERIRT
Sbjct: 246 PTGVVVSQQDEKSQHKNRAKAMKVLRARLYEAERSRVAAERAAERKGQVGSGDRSERIRT 305

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           YNFPQGRVTDHR+ +T + +  ++ GE +D  IDAL+++ + + +A+  S
Sbjct: 306 YNFPQGRVTDHRINLTLYKLDKVIAGEAVDDLIDALIVEDQAERLAAMES 355


>gi|42520141|ref|NP_966056.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58698355|ref|ZP_00373269.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|81652805|sp|Q73IC2.1|RF1_WOLPM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|42409878|gb|AAS13990.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|58535109|gb|EAL59194.1| peptide chain release factor 1 [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 359

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/316 (52%), Positives = 233/316 (73%), Gaps = 11/316 (3%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK------RLQSLLLK 54
           + +I E  T ++EI  L+ ++ + + + D+ ++A EE       EK      ++++ L  
Sbjct: 46  IKIIDEYNTLKEEISDLEEIMKDENSEGDIKELAKEEFF-----EKHKVLLPKIKAKLKL 100

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           +LLPKD+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++++ WKFE + ++ + + G
Sbjct: 101 ALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGG 160

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           YKEASA I+G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++  
Sbjct: 161 YKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEE 220

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           +DLRID YRS G GGQ  NTT+SAVRVTH+PTG+ +  QDE+SQH NKAKALKVL A+LY
Sbjct: 221 KDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLY 280

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           E+ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD
Sbjct: 281 EIERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELD 340

Query: 295 IFIDALLLQQEMDAIA 310
            FI+AL+ + E + +A
Sbjct: 341 EFIEALISRNEAERLA 356


>gi|225630064|ref|YP_002726855.1| peptide chain release factor 1 [Wolbachia sp. wRi]
 gi|225592045|gb|ACN95064.1| peptide chain release factor 1 [Wolbachia sp. wRi]
          Length = 357

 Score =  348 bits (892), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/316 (52%), Positives = 233/316 (73%), Gaps = 11/316 (3%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK------RLQSLLLK 54
           + +I E  T ++EI  L+ ++ + + + D+ ++A EE       EK      ++++ L  
Sbjct: 44  IKIIDEYNTLKEEISDLEEIMKDENSEGDIKELAKEEFF-----EKHKVLLPKIKAKLKL 98

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           +LLPKD+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++++ WKFE + ++ + + G
Sbjct: 99  ALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGG 158

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           YKEASA I+G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++  
Sbjct: 159 YKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEE 218

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           +DLRID YRS G GGQ  NTT+SAVRVTH+PTG+ +  QDE+SQH NKAKALKVL A+LY
Sbjct: 219 KDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLY 278

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           E+ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD
Sbjct: 279 EIERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELD 338

Query: 295 IFIDALLLQQEMDAIA 310
            FI+AL+ + E + +A
Sbjct: 339 EFIEALISRNEAERLA 354


>gi|190570518|ref|YP_001974876.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019274|ref|ZP_03335081.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238054477|sp|B3CL87.1|RF1_WOLPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190356790|emb|CAQ54152.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995383|gb|EEB56024.1| peptide chain release factor 1 [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 363

 Score =  348 bits (892), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 165/318 (51%), Positives = 236/318 (74%), Gaps = 7/318 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
           + +I E    ++EI  L+ ++ + + D D+ ++A EEL   ++++K    ++++ L  +L
Sbjct: 46  IEIIDEYNILKEEISDLEEIMKDENSDGDIKELAKEEL---LEKQKIVLPKVKAKLKLAL 102

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++++ WKFE + ++ + + GYK
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EASA I+G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD  +  +D
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFEIEEKD 222

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           LRID YRS G GGQ  NTT+SAVRVTH+PTG+ +  QDE+SQH NKAKALKVL A+LYE+
Sbjct: 223 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEI 282

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD F
Sbjct: 283 ERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEF 342

Query: 297 IDALLLQQEMDAIASFGS 314
           I+AL+ + E + +   G+
Sbjct: 343 IEALISRNEAERLTGGGN 360


>gi|353327645|ref|ZP_08969972.1| peptide chain release factor 1 [Wolbachia endosymbiont wVitB of
           Nasonia vitripennis]
          Length = 363

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 165/318 (51%), Positives = 236/318 (74%), Gaps = 7/318 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
           + +I E    ++EI  L+ ++ + + D D+ ++A EEL   ++++K    ++++ L  +L
Sbjct: 46  IEIIDEYNILKEEISDLEEIMKDENSDGDIKELAKEEL---LEKQKILLPKVKAKLKLAL 102

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++++ WKFE + ++ + + GYK
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EASA I+G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD  +  +D
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFEIEEKD 222

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           LRID YRS G GGQ  NTT+SAVRVTH+PTG+ +  QDE+SQH NKAKALKVL A+LYE+
Sbjct: 223 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEI 282

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD F
Sbjct: 283 ERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEF 342

Query: 297 IDALLLQQEMDAIASFGS 314
           I+AL+ + E + +   G+
Sbjct: 343 IEALISRNEAERLTGGGN 360


>gi|373450051|ref|ZP_09542126.1| peptide chain release factor 1 [Wolbachia pipientis wAlbB]
 gi|371932744|emb|CCE77114.1| peptide chain release factor 1 [Wolbachia pipientis wAlbB]
          Length = 363

 Score =  347 bits (891), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 165/318 (51%), Positives = 236/318 (74%), Gaps = 7/318 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
           + +I E    ++EI  L+ ++ + + D D+ ++A EEL   ++++K    ++++ L  +L
Sbjct: 46  IEIIDEYNMLKEEISDLEEIMKDENSDGDIKELAKEEL---LEKQKILLPKVKAKLKLAL 102

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++++ WKFE + ++ + + GYK
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EASA I+G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD  +  +D
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFEIEEKD 222

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           LRID YRS G GGQ  NTT+SAVRVTH+PTG+ +  QDE+SQH NKAKALKVL A+LYE+
Sbjct: 223 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEI 282

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD F
Sbjct: 283 ERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEF 342

Query: 297 IDALLLQQEMDAIASFGS 314
           I+AL+ + E + +   G+
Sbjct: 343 IEALISRNEAERLTGGGN 360


>gi|451940354|ref|YP_007460992.1| peptide chain release factor 1 [Bartonella australis Aust/NH1]
 gi|451899741|gb|AGF74204.1| peptide chain release factor 1 [Bartonella australis Aust/NH1]
          Length = 359

 Score =  347 bits (890), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 166/295 (56%), Positives = 225/295 (76%), Gaps = 2/295 (0%)

Query: 7   LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERD 66
           L T  KEI  LK++I +   D +M  +A EE+ L   + ++L+  L   LLPKD ADE+ 
Sbjct: 52  LNTAYKEIKELKTIIDDTQTDPEMRTLAQEEMPLLYQKIEQLERELQILLLPKDIADEKS 111

Query: 67  CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
            I+E+RAGTGG EA+LFA D+F+MYERY+    WK E+V ++ES++ GYKE  A+ISG G
Sbjct: 112 AIIEIRAGTGGLEAALFAGDLFRMYERYASAHNWKVEIVSLSESEVGGYKEIIASISGKG 171

Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
           V+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+DV +R ED+RIDT R+ G
Sbjct: 172 VFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDVEIRPEDIRIDTMRASG 231

Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRS 246
           +GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+ +AL++L A+L+++ER +    RS
Sbjct: 232 AGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRVRALQILRARLFDIERRKAASERS 290

Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD FIDAL+
Sbjct: 291 ASRKTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDEFIDALI 344


>gi|306844842|ref|ZP_07477425.1| peptide chain release factor 1 [Brucella inopinata BO1]
 gi|306274774|gb|EFM56555.1| peptide chain release factor 1 [Brucella inopinata BO1]
          Length = 359

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 231/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   +KE   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARKEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|254504878|ref|ZP_05117029.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
 gi|222440949|gb|EEE47628.1| peptide chain release factor 1 [Labrenzia alexandrii DFL-11]
          Length = 357

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 161/308 (52%), Positives = 233/308 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L   ++++ G + LI + + D +M ++A  E     +  +RL   +   LLPKD+AD
Sbjct: 47  IRALVKAEEDLKGAEDLIEDPATDPEMRELAELERDELSENVERLTQDVRIGLLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
             D ILEVRAGTGG+EA+LFA D+F+MY+RY++ +GWK E++  +E ++ G+KE  A++S
Sbjct: 107 TNDAILEVRAGTGGDEAALFAGDLFRMYQRYAELRGWKVEILSASEGEVGGFKEVIASVS 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA+ VD+ +++ DLRIDT+R
Sbjct: 167 GENVFARLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAENVDIDVQDSDLRIDTFR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ +++QDERSQH NKA+A+++L A++Y+ ER R   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERERAAS 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T + +  ++ GE+LD  I+AL+L 
Sbjct: 287 ERTEARRLQVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLDQIIAGESLDEVIEALILD 346

Query: 304 QEMDAIAS 311
            + + +AS
Sbjct: 347 YQANLLAS 354


>gi|58584615|ref|YP_198188.1| peptide chain release factor 1 [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
 gi|75497913|sp|Q5GSS8.1|RF1_WOLTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58418931|gb|AAW70946.1| Protein chain release factor A [Wolbachia endosymbiont strain TRS
           of Brugia malayi]
          Length = 359

 Score =  347 bits (889), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 234/314 (74%), Gaps = 7/314 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
           + +I+E  T +KEI  L+ +I + + + D+ ++A EE     +++K    ++++ L  +L
Sbjct: 46  IKIINEYDTLKKEILDLEEIIKDENSEYDIKELAKEEF---FEKQKVLLPQVKAKLKLAL 102

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD+ D R+ ILE+RAGTGGEEA+LFA  +F+MY++Y++++ WKFE + ++ + + GYK
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYK 162

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EASA I+G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++  +D
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKD 222

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           LRID YRS G GGQ  NTT+SAVRVTH+PT M +  QDE+SQH NKAKALKVL A+LYE+
Sbjct: 223 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEI 282

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER +  + RS +R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T H +  +++   LD F
Sbjct: 283 ERQKKEIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEF 342

Query: 297 IDALLLQQEMDAIA 310
           I+ L+ + E + +A
Sbjct: 343 IEVLISRNEAERLA 356


>gi|222149911|ref|YP_002550868.1| peptide chain release factor 1 [Agrobacterium vitis S4]
 gi|254790856|sp|B9JT13.1|RF1_AGRVS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221736893|gb|ACM37856.1| peptide chain release factor 1 [Agrobacterium vitis S4]
          Length = 359

 Score =  347 bits (889), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 171/313 (54%), Positives = 229/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   +KE+  LK+L+ + S D++M D+A  EL    D E RL+ L   +   LLPKD
Sbjct: 49  IRELGLAEKEVADLKALLADKSTDREMRDLAEMELP---DVEARLEGLEKEIQIQLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E D  G+KE  A
Sbjct: 106 AADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ++G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RID
Sbjct: 166 TVTGRGVFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEEIDIEVRAEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++L++MER R
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHQNRAKAMQVLRSRLFDMERQR 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MM GE +D  +DAL
Sbjct: 285 ADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMMGE-IDEVVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 IADYQAGQLAQLG 356


>gi|418410195|ref|ZP_12983505.1| peptide chain release factor 1 [Agrobacterium tumefaciens 5A]
 gi|358003754|gb|EHJ96085.1| peptide chain release factor 1 [Agrobacterium tumefaciens 5A]
          Length = 360

 Score =  347 bits (889), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 166/304 (54%), Positives = 225/304 (74%), Gaps = 2/304 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           E  GL++L+ + + DKDM D+A  EL        +L+  +   LLPKD ADE+  ILE+R
Sbjct: 58  EAAGLQALLADKTTDKDMRDLAEMELPEVEARIGQLEKEMQVLLLPKDAADEKSAILEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY++ER ++   RS  R  Q
Sbjct: 238 NTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQKVESERSADRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  M+EGE +D  +DAL+   +   +A  
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEGE-IDELVDALIADYQAGQLAQL 355

Query: 313 GSTQ 316
           G  Q
Sbjct: 356 GEQQ 359


>gi|94496666|ref|ZP_01303242.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
 gi|94424026|gb|EAT09051.1| peptide chain release factor 1 [Sphingomonas sp. SKA58]
          Length = 361

 Score =  347 bits (889), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 162/307 (52%), Positives = 220/307 (71%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           ELR  ++E+  L+ +      D  M DMA EE+ L   +    +  L   LLP+D AD R
Sbjct: 51  ELRRLRQELAALEMMTGGEEADPAMRDMAQEEMQLLKSQLPAAERALALQLLPRDAADAR 110

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
             +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S+  G+KE  A+I+G 
Sbjct: 111 PAMLEIRAGTGGDEAALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASINGA 170

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
           GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ +EVDV++ + DL+ID YR+ 
Sbjct: 171 GVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADADLKIDIYRAS 230

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQH NTT+SAVR+TH+PTG+ ++ QDERSQH NKAKA++VL A+LYE ER R    +
Sbjct: 231 GAGGQHVNTTDSAVRITHVPTGIVVTQQDERSQHKNKAKAMQVLRARLYEAERERTQNEQ 290

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL  + E
Sbjct: 291 AGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALTAEDE 350

Query: 306 MDAIASF 312
              +A  
Sbjct: 351 AARLAQL 357


>gi|332188246|ref|ZP_08389974.1| peptide chain release factor 1 [Sphingomonas sp. S17]
 gi|332011745|gb|EGI53822.1| peptide chain release factor 1 [Sphingomonas sp. S17]
          Length = 357

 Score =  346 bits (887), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 164/308 (53%), Positives = 228/308 (74%), Gaps = 3/308 (0%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           +E+R  ++E D L  +  +   D ++ ++A EEL             L  +LLP+D ADE
Sbjct: 51  AEVRRLRQEADSLTFMTQDG--DDELRELAAEELHANRTALAAADRHLALALLPRDAADE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R  +LE+RAGTGG+EA+LFA D+F+MY+RY++++GW+ EV+  +  D  GYKE  A+++G
Sbjct: 109 RAAMLEIRAGTGGDEAALFAGDLFRMYQRYAERQGWRVEVISASIPDTGGYKEVVASVAG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
            GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRID YRS
Sbjct: 169 AGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDLQIDDKDLRIDIYRS 228

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH N+AKA+KVL  +LYE ER R+   
Sbjct: 229 SGAGGQHVNTTDSAIRITHIPTGLVVIQQDERSQHKNRAKAMKVLRTRLYEAERERLAAE 288

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
           R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EGE LD  I ALL + 
Sbjct: 289 RAGTRRSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGE-LDELIGALLAED 347

Query: 305 EMDAIASF 312
           E + +A+ 
Sbjct: 348 EAERLAAL 355


>gi|168203426|gb|ACA21561.1| protein release factor class I [Candidatus Pelagibacter ubique]
          Length = 356

 Score =  346 bits (887), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 162/297 (54%), Positives = 227/297 (76%), Gaps = 2/297 (0%)

Query: 17  LKSLIYECSEDKDMLDMATEELC-LAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           LK ++ + + D+++L MA  E+  L I  EK  + L L  LLP+D+AD+++ I+E+RAGT
Sbjct: 61  LKKILEDQNSDEELLKMAETEIKDLQIQFEKNEKKLKL-FLLPRDEADKKNAIIEIRAGT 119

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG EASLFA D+FKMYE+ S KK W  E++ +++S+  G KE  A+I G  +Y  LK+ES
Sbjct: 120 GGLEASLFAGDLFKMYEKVSHKKKWLVEIISISKSEAGGLKEVIASIKGTNIYSTLKYES 179

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTT 195
           G+HRVQRVP TE  GRVHTSA +VA+LP+A+EVD+++ + DLRID +R+GG GGQ  NTT
Sbjct: 180 GVHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDLKINDSDLRIDVFRAGGPGGQSVNTT 239

Query: 196 NSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGS 255
           +SAVR+THIPTG+++S QDE+SQH NKAK +K+L A+LYE+ER+RI   RS+ R  +IG+
Sbjct: 240 DSAVRITHIPTGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSQDRKSKIGT 299

Query: 256 GDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           GDRSERIRTYNFPQGRVTDHR+ +T H + + +EGE  D  I++L LQ + +++++ 
Sbjct: 300 GDRSERIRTYNFPQGRVTDHRINLTIHKLEEFLEGEAFDEMIESLTLQAQEESLSNL 356


>gi|306842976|ref|ZP_07475610.1| peptide chain release factor 1 [Brucella sp. BO2]
 gi|306286904|gb|EFM58429.1| peptide chain release factor 1 [Brucella sp. BO2]
          Length = 315

 Score =  346 bits (887), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 231/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   +KE   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 5   IRELSDARKEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 61

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 62  VADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 121

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 122 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 181

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 182 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 240

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 241 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 299

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 300 ISDHQTALLAELG 312


>gi|161511164|ref|NP_539109.2| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|225853308|ref|YP_002733541.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260562790|ref|ZP_05833276.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
 gi|20139330|sp|Q8YJ95.2|RF1_BRUME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790867|sp|C0RFB5.1|RF1_BRUMB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225641673|gb|ACO01587.1| peptide chain release factor 1 [Brucella melitensis ATCC 23457]
 gi|260152806|gb|EEW87898.1| peptide chain release factor 1 [Brucella melitensis bv. 1 str. 16M]
          Length = 359

 Score =  345 bits (886), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEGE LD  +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|379022896|ref|YP_005299557.1| peptide chain release factor 1 [Rickettsia canadensis str. CA410]
 gi|376323834|gb|AFB21075.1| peptide chain release factor 1 [Rickettsia canadensis str. CA410]
          Length = 355

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/307 (52%), Positives = 225/307 (73%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKD+AD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVELDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW FE++ + ++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLK ESG+HRVQR+P TE  GR+HTSA +VA+LP+ ++VD++L ++DLRIDTYR
Sbjct: 167 GKDVFSKLKCESGVHRVQRIPETESHGRIHTSAATVAVLPEVEDVDIKLEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTTNSAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 SSGAGGQHVNTTNSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F+DAL+  
Sbjct: 287 KRANNRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIAD 346

Query: 304 QEMDAIA 310
            E   +A
Sbjct: 347 DEAKKLA 353


>gi|265982882|ref|ZP_06095617.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306838261|ref|ZP_07471111.1| peptide chain release factor 1 [Brucella sp. NF 2653]
 gi|264661474|gb|EEZ31735.1| peptide chain release factor 1 [Brucella sp. 83/13]
 gi|306406664|gb|EFM62893.1| peptide chain release factor 1 [Brucella sp. NF 2653]
          Length = 359

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 231/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   +KE   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARKEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  ++AL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVNAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|393722766|ref|ZP_10342693.1| peptide chain release factor 1 [Sphingomonas sp. PAMC 26605]
          Length = 357

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/307 (53%), Positives = 226/307 (73%), Gaps = 3/307 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E+R  + E+D L  +  E   D ++  MA EE+    D     +  L  SLLP+D ADER
Sbjct: 52  EVRRLRAELDVLAGM--EEESDPEIKLMAREEIATIRDTLPDAERALALSLLPRDAADER 109

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
             +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GW+ E++  + S+  G+KEA A++ G 
Sbjct: 110 AAMLEIRAGTGGDEAALFAADLFRMYQRYAEAQGWRVELISASSSESGGFKEAIASVEGK 169

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
           GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV++ ++DLRID YRS 
Sbjct: 170 GVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDVKIDDKDLRIDVYRSS 229

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SAVR+ HIPTG+T+  QDE+SQH N+AKA++VL  +LYE ER R+H  R
Sbjct: 230 GPGGQSVNTTDSAVRIVHIPTGLTVIQQDEKSQHKNRAKAMRVLRTRLYEAERDRLHQER 289

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + ++++GE +D  + AL+ Q E
Sbjct: 290 AGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILQGE-MDELVGALIAQDE 348

Query: 306 MDAIASF 312
            + +A+ 
Sbjct: 349 AERLAAL 355


>gi|157803730|ref|YP_001492279.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
 gi|166223597|sp|A8EYR1.1|RF1_RICCK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157784993|gb|ABV73494.1| peptide chain release factor 1 [Rickettsia canadensis str. McKiel]
          Length = 355

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 160/307 (52%), Positives = 225/307 (73%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKD+AD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW FE++ + ++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLK ESG+HRVQR+P TE  GR+HTSA +VA+LP+ ++VD++L ++DLRIDTYR
Sbjct: 167 GKDVFSKLKCESGVHRVQRIPETESHGRIHTSAATVAVLPEVEDVDIKLEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTTNSAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 SSGAGGQHVNTTNSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F+DAL+  
Sbjct: 287 KRANNRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIAD 346

Query: 304 QEMDAIA 310
            E   +A
Sbjct: 347 DEAKKLA 353


>gi|265993634|ref|ZP_06106191.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764615|gb|EEZ10536.1| peptide chain release factor 1 [Brucella melitensis bv. 3 str.
           Ether]
          Length = 372

 Score =  345 bits (885), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 62  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 118

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 119 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 178

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 179 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 238

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 239 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 297

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEGE LD  +DAL
Sbjct: 298 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDELVDAL 356

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 357 ISDHQTALLAELG 369


>gi|265999301|ref|ZP_05465736.2| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|384212220|ref|YP_005601304.1| peptide chain release factor 1 [Brucella melitensis M5-90]
 gi|384409325|ref|YP_005597946.1| peptide chain release factor 1 [Brucella melitensis M28]
 gi|384445866|ref|YP_005604585.1| peptide chain release factor 1 [Brucella melitensis NI]
 gi|17982074|gb|AAL51373.1| bacterial peptide chain release factor 1 (rf-1) [Brucella
           melitensis bv. 1 str. 16M]
 gi|263093126|gb|EEZ17261.1| peptide chain release factor 1 [Brucella melitensis bv. 2 str.
           63/9]
 gi|326409872|gb|ADZ66937.1| peptide chain release factor 1 [Brucella melitensis M28]
 gi|326539585|gb|ADZ87800.1| peptide chain release factor 1 [Brucella melitensis M5-90]
 gi|349743855|gb|AEQ09398.1| peptide chain release factor 1 [Brucella melitensis NI]
          Length = 377

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 67  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 123

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 124 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 183

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 184 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 243

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 244 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 302

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEGE LD  +DAL
Sbjct: 303 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDELVDAL 361

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 362 ISDHQTALLAELG 374


>gi|357973917|ref|ZP_09137888.1| peptide chain release factor 1 [Sphingomonas sp. KC8]
          Length = 361

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 163/310 (52%), Positives = 228/310 (73%), Gaps = 6/310 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL---QSLLLKSLLPKDDA 62
           E+R  + E+  L  +I +   D ++ +MA +E   A D   RL   +  L   LLP+D A
Sbjct: 52  EVRRLRAELANLAFMIDDPQADAEIREMAQDE---AADIRARLPDAERALAIRLLPRDAA 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER  +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GWK E++  + ++L GYKE  A++
Sbjct: 109 DERAAMLEIRAGTGGDEAALFAGDLFRMYQRYAEDRGWKVELISASAAELGGYKEVVASV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VDV++ ++DLRID Y
Sbjct: 169 TGAGVFARLKFESGVHRVQRVPATESGGRIHTSAATVAVLPEAEDVDVQIDDKDLRIDVY 228

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G GGQ  NTT+SAVR+TH+P+G+ +  QDE+SQH NKAKALKVL  +LYE ER R+ 
Sbjct: 229 RSSGPGGQSVNTTDSAVRITHLPSGLVVIQQDEKSQHKNKAKALKVLRTRLYEQERERLA 288

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H +S+++EG  LD  + AL+ 
Sbjct: 289 SARAGERKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLSEILEGPGLDELVSALIA 348

Query: 303 QQEMDAIASF 312
           + E   +A+ 
Sbjct: 349 EDEAARLANL 358


>gi|404316530|ref|ZP_10964463.1| peptide chain release factor 1 [Ochrobactrum anthropi CTS-325]
          Length = 357

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   +KE   L ++  + S D +M  +A EEL      EKR++ L   +   LLPKD
Sbjct: 49  IRELTDARKEAVDLAAMRDDASTDAEMRALALEELPGV---EKRIEGLEQEVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADEKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AETERSESRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +   G
Sbjct: 344 ISDHQTALLTELG 356


>gi|384262086|ref|YP_005417272.1| Peptide chain release factor 1 [Rhodospirillum photometricum DSM
           122]
 gi|378403186|emb|CCG08302.1| Peptide chain release factor 1 [Rhodospirillum photometricum DSM
           122]
          Length = 354

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 162/289 (56%), Positives = 224/289 (77%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D D+  +A EEL    D   RL+  +   LLPKD+ADER  ILEVRAGTGG+EA+LFA 
Sbjct: 66  DDPDLRALAREELDRLDDTLPRLEKDVWLMLLPKDEADERGVILEVRAGTGGDEAALFAG 125

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY+Q++GW+FEV+  +++D+ G KEASA+I+G GVY +LK+ESG+HRVQRVP+
Sbjct: 126 DLLRMYGRYAQERGWRFEVLDASDTDIGGVKEASASIAGRGVYARLKYESGVHRVQRVPV 185

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA +VA+LP+A+EVDV++ ++DLR+DTYRS G+GGQH NTT+SAVR+TH+P
Sbjct: 186 TEAGGRIHTSAATVAVLPEAEEVDVQIDDKDLRVDTYRSQGAGGQHVNTTDSAVRITHLP 245

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           +G+ +  QDE+SQH N+AKA+++L AKLY+  R     +R+  R  Q+GSGDRSERIRTY
Sbjct: 246 SGVVVQCQDEKSQHKNRAKAMRMLRAKLYDHARQVADDARAAARKTQVGSGDRSERIRTY 305

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           NFPQGRVTDHR+G+T H + +++ G  LD  ID L+ + +   +A  G+
Sbjct: 306 NFPQGRVTDHRIGLTLHRLPEVLAGTALDEVIDPLIAEDQAAKLAELGA 354


>gi|23502722|ref|NP_698849.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161619787|ref|YP_001593674.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|256370269|ref|YP_003107780.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260567639|ref|ZP_05838109.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|261217701|ref|ZP_05931982.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261316358|ref|ZP_05955555.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261321452|ref|ZP_05960649.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261751020|ref|ZP_05994729.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261755581|ref|ZP_05999290.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|340791460|ref|YP_004756925.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|376281517|ref|YP_005155523.1| peptide chain release factor 1 [Brucella suis VBI22]
 gi|384225509|ref|YP_005616673.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|32171563|sp|Q8FYK3.1|RF1_BRUSU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189039960|sp|A9M8K5.1|RF1_BRUC2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|23348737|gb|AAN30764.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|161336598|gb|ABX62903.1| peptide chain release factor 1 [Brucella canis ATCC 23365]
 gi|256000432|gb|ACU48831.1| peptide chain release factor 1 [Brucella microti CCM 4915]
 gi|260157157|gb|EEW92237.1| peptide chain release factor 1 [Brucella suis bv. 4 str. 40]
 gi|260922790|gb|EEX89358.1| peptide chain release factor 1 [Brucella ceti M13/05/1]
 gi|261294142|gb|EEX97638.1| peptide chain release factor 1 [Brucella ceti M644/93/1]
 gi|261295581|gb|EEX99077.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|261740773|gb|EEY28699.1| peptide chain release factor 1 [Brucella suis bv. 5 str. 513]
 gi|261745334|gb|EEY33260.1| peptide chain release factor 1 [Brucella suis bv. 3 str. 686]
 gi|340559919|gb|AEK55157.1| peptide chain release factor 1 [Brucella pinnipedialis B2/94]
 gi|343383689|gb|AEM19181.1| peptide chain release factor 1 [Brucella suis 1330]
 gi|358259116|gb|AEU06851.1| peptide chain release factor 1 [Brucella suis VBI22]
          Length = 359

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|153008371|ref|YP_001369586.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
 gi|166223580|sp|A6WXQ3.1|RF1_OCHA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151560259|gb|ABS13757.1| peptide chain release factor 1 [Ochrobactrum anthropi ATCC 49188]
          Length = 357

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   +KE   L ++  + S D +M  +A EEL      EKR++ L   +   LLPKD
Sbjct: 49  IRELTDSRKEAVDLAAMRDDASTDAEMRALALEELPGV---EKRIEGLEQEVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADEKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 ADTERSESRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +   G
Sbjct: 344 ISDHQTALLTELG 356


>gi|294851112|ref|ZP_06791785.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
 gi|294819701|gb|EFG36700.1| peptide chain release factor 1 [Brucella sp. NVSL 07-0026]
          Length = 377

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 67  IRELSDARMEASDLAAMSDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 123

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 124 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 183

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 184 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 243

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 244 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 302

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 303 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 361

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 362 ISDHQTALLAELG 374


>gi|62290730|ref|YP_222523.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. 9-941]
 gi|82700642|ref|YP_415216.1| peptide chain release factor 1 [Brucella melitensis biovar Abortus
           2308]
 gi|189024940|ref|YP_001935708.1| peptide chain release factor 1 [Brucella abortus S19]
 gi|260545992|ref|ZP_05821732.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260760500|ref|ZP_05872843.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261214824|ref|ZP_05929105.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261315085|ref|ZP_05954282.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|423168151|ref|ZP_17154854.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI435a]
 gi|423169473|ref|ZP_17156148.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI474]
 gi|423175537|ref|ZP_17162206.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI486]
 gi|423177613|ref|ZP_17164258.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI488]
 gi|423178906|ref|ZP_17165547.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI010]
 gi|423182037|ref|ZP_17168674.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI016]
 gi|423187021|ref|ZP_17173635.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI021]
 gi|423190543|ref|ZP_17177151.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI259]
 gi|75496230|sp|Q57B22.1|RF1_BRUAB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361513|sp|Q2YLN8.1|RF1_BRUA2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689404|sp|B2S825.1|RF1_BRUA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|62196862|gb|AAX75162.1| PrfA, peptide chain release factor 1 [Brucella abortus bv. 1 str.
           9-941]
 gi|82616743|emb|CAJ11828.1| Class I peptide chain release factor domain:Peptide chain release
           factor 1:PCRF domain [Brucella melitensis biovar Abortus
           2308]
 gi|189020512|gb|ACD73234.1| Class I peptide chain release factor domain protein [Brucella
           abortus S19]
 gi|260096099|gb|EEW79975.1| peptide chain release factor 1 [Brucella abortus NCTC 8038]
 gi|260670932|gb|EEX57753.1| peptide chain release factor 1 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260916431|gb|EEX83292.1| peptide chain release factor 1 [Brucella abortus bv. 3 str. Tulya]
 gi|261304111|gb|EEY07608.1| peptide chain release factor 1 [Brucella pinnipedialis M163/99/10]
 gi|374535981|gb|EHR07502.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI486]
 gi|374539900|gb|EHR11403.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI435a]
 gi|374543152|gb|EHR14635.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI474]
 gi|374549201|gb|EHR20645.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI488]
 gi|374551850|gb|EHR23279.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI016]
 gi|374552222|gb|EHR23650.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI010]
 gi|374554313|gb|EHR25724.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI259]
 gi|374557733|gb|EHR29129.1| peptide chain release factor 1 [Brucella abortus bv. 1 str. NI021]
          Length = 359

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|332716892|ref|YP_004444358.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
 gi|325063577|gb|ADY67267.1| peptide chain release factor 1 [Agrobacterium sp. H13-3]
          Length = 360

 Score =  344 bits (883), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 169/304 (55%), Positives = 226/304 (74%), Gaps = 10/304 (3%)

Query: 17  LKSLIYECSEDKDMLDMATEELC---LAIDE-EKRLQSLLLKSLLPKDDADERDCILEVR 72
           L++L+ + + DKDM D+A  EL      I E EK +Q LLL    PKD ADE+  ILE+R
Sbjct: 62  LQALLADKTTDKDMRDLAEMELPEVEARIGELEKEMQVLLL----PKDAADEKSAILEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYERFASAKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY++ER ++   RS  R  Q
Sbjct: 238 NTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQKVESERSADRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  M+EGE +D  +DAL+   +   +A  
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEGE-IDELVDALIADYQAGQLAQL 355

Query: 313 GSTQ 316
           G  Q
Sbjct: 356 GEQQ 359


>gi|407779483|ref|ZP_11126738.1| peptide chain release factor 1 [Nitratireductor pacificus pht-3B]
 gi|407298614|gb|EKF17751.1| peptide chain release factor 1 [Nitratireductor pacificus pht-3B]
          Length = 359

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 164/314 (52%), Positives = 238/314 (75%), Gaps = 8/314 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKR---LQSLLLKSLLPKD 60
           I ELR  + E+  L++++ + S D++M ++A  +L    D E+R   LQ+ +   LLPKD
Sbjct: 49  IRELRQAEAELSDLETMLADPSTDREMRELAEADLG---DVEERIDALQAEMQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADE++ ILE+RAGTGG+EA+LFA D+F+MYERY+ +K W+ EVV  +E +  GYKE  A
Sbjct: 106 EADEKNAILEIRAGTGGDEAALFAGDLFRMYERYASEKSWRVEVVSASEGEAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+DV +RNED+RID
Sbjct: 166 TVSGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEIDVEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIP+G+ + +Q E+SQH N+A+A+++L A+L++ +RS+
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPSGIVV-VQAEKSQHQNRARAMQILRARLFDAQRSK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  ++EG +LD  +DAL
Sbjct: 285 AADERSEARRLQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRIIEG-DLDEVVDAL 343

Query: 301 LLQQEMDAIASFGS 314
           +   +   +A  G+
Sbjct: 344 ISDHQAKLLAETGA 357


>gi|23015680|ref|ZP_00055449.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 354

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 164/288 (56%), Positives = 213/288 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM D+A EE     +    L+  +   LLPKD+ADE++ I+EVRAGTGGEEA+L
Sbjct: 64  EMMNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAAL 123

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA ++F+MYERY+   GW+FEV+ V ++ + G KEASA I+G  V+ +LKFESG+HRVQR
Sbjct: 124 FAAELFRMYERYASVHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQR 183

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VAI+P+A+EVD++L + DLR D YRS GSGGQ  NTT+SAVRVT
Sbjct: 184 VPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVT 243

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+ ++ Q E+SQH NKA ALK+L A+LYE ERS     R+  R  Q+GSGDRSERI
Sbjct: 244 HIPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERI 303

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           RTYNFPQGRVTDHR+ +T + I  +M G+ LD  I+AL+   + + +A
Sbjct: 304 RTYNFPQGRVTDHRINLTLYKIDAVMSGDALDELIEALVAADQAERLA 351


>gi|334345900|ref|YP_004554452.1| peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
 gi|334102522|gb|AEG49946.1| Peptide chain release factor 1 [Sphingobium chlorophenolicum L-1]
          Length = 363

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 224/309 (72%), Gaps = 2/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           E+R  ++E+  L+ +      D D  M +MA EE+ L        +  L   LLPKD AD
Sbjct: 51  EVRRLRQELSALEYMAGGEDADADPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S++ GYKE  A+++
Sbjct: 111 ARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVT 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           GVGV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ +EVDV++ + DL+ID YR
Sbjct: 171 GVGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADSDLKIDIYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+P+G+ ++ QDERSQH NKAKA++VL A++YE+ER R   
Sbjct: 231 ASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVERERAQS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ +
Sbjct: 291 EQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAE 350

Query: 304 QEMDAIASF 312
            E   +A  
Sbjct: 351 DEAARLAQL 359


>gi|427432053|ref|ZP_18921050.1| Peptide chain release factor 1 [Caenispirillum salinarum AK4]
 gi|425877425|gb|EKV26169.1| Peptide chain release factor 1 [Caenispirillum salinarum AK4]
          Length = 352

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 167/310 (53%), Positives = 226/310 (72%), Gaps = 4/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I+ELR  + +++  +++    + D +M D+A EE     +    L+  +   L+PKD+AD
Sbjct: 47  IAELRKARSDLEEAEAM----ASDPEMRDLAQEEAADLRERVPELEHAVKLLLVPKDEAD 102

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R+ ILEVRAGTGG+EA+LFA ++F+MYERY+  KGWK EV+ + E+DL G KE  A IS
Sbjct: 103 ARNAILEVRAGTGGDEAALFAGELFRMYERYAALKGWKVEVMDLNETDLGGVKEVVAMIS 162

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A +VDV + ++DLRIDTYR
Sbjct: 163 GRDVFARLKYESGVHRVQRVPETEGGGRIHTSAATVAVLPEAQDVDVHIEDKDLRIDTYR 222

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT SAVR+TH+PTG+  + Q+E+SQH NKAKALK+L AKLYE +R +   
Sbjct: 223 SQGAGGQHVNTTESAVRITHVPTGVVAACQEEKSQHKNKAKALKMLMAKLYEHQREQAVN 282

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T +AI  +M+GE LD  +DAL  +
Sbjct: 283 ERAEARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYAIDKIMQGEGLDDLVDALTTE 342

Query: 304 QEMDAIASFG 313
                +A   
Sbjct: 343 DNAAKLAELA 352


>gi|407976875|ref|ZP_11157771.1| peptide chain release factor 1 [Nitratireductor indicus C115]
 gi|407427774|gb|EKF40462.1| peptide chain release factor 1 [Nitratireductor indicus C115]
          Length = 359

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 164/313 (52%), Positives = 236/313 (75%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKS---LLPKD 60
           I EL+  + E+  L +++ + S D++M ++A  +L      E+RL++L  +    LLPKD
Sbjct: 49  IRELKQAEGELADLTAMLNDASTDREMRELAEADLETV---EERLETLSAEMQLLLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +ADE++ ILE+RAGTGG+EA+LFA D+F+MYERY+  +GW+ EVV  +E +  GYKE  A
Sbjct: 106 EADEKNAILEIRAGTGGDEAALFAGDLFRMYERYAADRGWRVEVVSTSEGEAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+DV +RNED+RID
Sbjct: 166 TVSGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEIDVEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIP+G+ + +Q E+SQH N+A+A+++L ++L++M+R +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPSGIVV-VQAEKSQHQNRARAMQILRSRLFDMQRMK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE LD  IDAL
Sbjct: 285 AADERSEARRLQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGE-LDELIDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 IADHQSRLLAETG 356


>gi|300025029|ref|YP_003757640.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526850|gb|ADJ25319.1| peptide chain release factor 1 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 359

 Score =  344 bits (882), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 161/312 (51%), Positives = 223/312 (71%), Gaps = 1/312 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  LR  + E   L+ L+ + S DKDM D+A  E     +    L+  L  +LLPKD AD
Sbjct: 49  IEALRKAEAESADLEQLLRDPSADKDMADLAYAERAALAERIGGLEQQLRIALLPKDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+MY RY+  +GWK EV+  +E+DL GYKE  A+I+
Sbjct: 109 EKSAILEVRAGTGGDEAALFAADLFRMYSRYADLRGWKVEVISASENDLGGYKEIVASIT 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A++V++ ++ +D+RIDT R
Sbjct: 169 GEGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEDVEIDIKPDDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           +GG+GGQH N T SAVR+TH+PTG+ + +  E+SQH N+  A+ VL A++YE+ER +   
Sbjct: 229 AGGAGGQHVNKTESAVRITHLPTGIVV-VSAEKSQHQNRRLAMNVLKARVYELEREKAAT 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRS+RIRTYNFPQGRVTDHR+ +T + + ++M G  LD  +DAL+  
Sbjct: 288 ERSDARKSQVGSGDRSQRIRTYNFPQGRVTDHRINLTLYNLDEVMVGNGLDALVDALITD 347

Query: 304 QEMDAIASFGST 315
            +   +A   + 
Sbjct: 348 HQATMLAELNAA 359


>gi|393720641|ref|ZP_10340568.1| peptide chain release factor 1 [Sphingomonas echinoides ATCC 14820]
          Length = 357

 Score =  344 bits (882), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 165/309 (53%), Positives = 226/309 (73%), Gaps = 3/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E+R  + E+D L  +  E   D ++  MA EE+    +     +  L  SLLP+D ADER
Sbjct: 52  EVRRLRAELDVLAGM--EDDGDPEIKTMAREEIDTIRERLPVAERALALSLLPRDAADER 109

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
             +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GW+ E++  + S+  G+KEA A++ G 
Sbjct: 110 AAMLEIRAGTGGDEAALFAADLFRMYQRYAESQGWRVELISTSSSESGGFKEAIASVEGK 169

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
           GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV++ ++DLRID YRS 
Sbjct: 170 GVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDVKIEDKDLRIDIYRSS 229

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SAVR+ HIPTG+T+  QDE+SQH NKAKA++VL  +LYE ER R+H  R
Sbjct: 230 GPGGQSVNTTDSAVRIVHIPTGLTVIQQDEKSQHKNKAKAMRVLRTRLYEAERDRLHQER 289

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++ GE +D  + AL+ Q E
Sbjct: 290 AGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILAGE-MDELLGALIAQDE 348

Query: 306 MDAIASFGS 314
            + +AS  S
Sbjct: 349 AERLASLDS 357


>gi|148558947|ref|YP_001259697.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|265987430|ref|ZP_06099987.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
 gi|148370204|gb|ABQ60183.1| peptide chain release factor 1 [Brucella ovis ATCC 25840]
 gi|264659627|gb|EEZ29888.1| peptide chain release factor 1 [Brucella pinnipedialis M292/94/1]
          Length = 377

 Score =  344 bits (882), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 67  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 123

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 124 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 183

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 184 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 243

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 244 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 302

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 303 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 361

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 362 ISDHQTALLAELG 374


>gi|320169793|gb|EFW46692.1| peptide chain release factor 1 [Capsaspora owczarzaki ATCC 30864]
          Length = 523

 Score =  344 bits (882), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 161/309 (52%), Positives = 224/309 (72%), Gaps = 2/309 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
           +  +  K+K+ID L +++     + D  M  MA  E   A+++   L+  LL  L+PK++
Sbjct: 198 LQRMTAKRKDIDDLDAMVEASRNENDVEMRKMAQSEWTDAVEQLYELEQELLNVLVPKNE 257

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            D+R+ ILEVRAGTGG EASLF+ D+F MY+ Y++ +GWKFEV+ ++ SD+ G+KEASA 
Sbjct: 258 VDDRNAILEVRAGTGGLEASLFSSDMFTMYQNYAEIRGWKFEVIDISRSDVGGFKEASAT 317

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           ISG GV+G LKFESG+HRVQRVP TE  GRVHTS V+VA+LP+A +VD+ L   DLRI+T
Sbjct: 318 ISGYGVFGHLKFESGVHRVQRVPQTESQGRVHTSTVTVALLPEAQDVDIELNERDLRIET 377

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
            R+ G+GGQH N T SA+RVTHIP+G+ + +Q++RSQH N+AKA  VL A+LYE++R ++
Sbjct: 378 MRASGAGGQHVNKTESAIRVTHIPSGIAVHVQEDRSQHKNRAKAYSVLRARLYEIQREKL 437

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
              R+  R+EQ+G+G RSERIRTYNFPQ RVTDHRV +T H + + + GE LD  I +L 
Sbjct: 438 AQERAAHRAEQVGTGSRSERIRTYNFPQDRVTDHRVNVTLHGVPEFLLGEGLDEIIASLR 497

Query: 302 LQQEMDAIA 310
             +  + +A
Sbjct: 498 THEHAEELA 506


>gi|407721678|ref|YP_006841340.1| peptide chain release factor 1 [Sinorhizobium meliloti Rm41]
 gi|407319910|emb|CCM68514.1| Peptide chain release factor 1 [Sinorhizobium meliloti Rm41]
          Length = 360

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 167/317 (52%), Positives = 232/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++S++R  +K   E+  + +++ + + DKDM D+A  E     ++ + L+  +   LLPK
Sbjct: 45  VVSKIRAYEKATAELADIAAMLADRATDKDMRDLAEMERPEVEEKIEALEQEIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+  KGW+ EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R+
Sbjct: 165 ATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRV 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+AKA++VL ++LY+MER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE +D  +DA
Sbjct: 284 RADSERSADRRSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-IDDVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           LL   +   +A  G  Q
Sbjct: 343 LLADYQASQLALLGERQ 359


>gi|237816235|ref|ZP_04595228.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260758776|ref|ZP_05871124.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260884577|ref|ZP_05896191.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297247116|ref|ZP_06930834.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
 gi|376272411|ref|YP_005150989.1| peptide chain release factor 1 [Brucella abortus A13334]
 gi|237788302|gb|EEP62517.1| peptide chain release factor 1 [Brucella abortus str. 2308 A]
 gi|260669094|gb|EEX56034.1| peptide chain release factor 1 [Brucella abortus bv. 4 str. 292]
 gi|260874105|gb|EEX81174.1| peptide chain release factor 1 [Brucella abortus bv. 9 str. C68]
 gi|297174285|gb|EFH33632.1| peptide chain release factor 1 [Brucella abortus bv. 5 str. B3196]
 gi|363400017|gb|AEW16987.1| peptide chain release factor 1 [Brucella abortus A13334]
          Length = 377

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 67  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 123

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 124 AADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 183

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 184 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 243

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 244 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 302

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 303 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 361

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 362 ISDHQTALLAELG 374


>gi|376275535|ref|YP_005115974.1| peptide chain release factor 1 [Brucella canis HSK A52141]
 gi|363404102|gb|AEW14397.1| peptide chain release factor 1 [Brucella canis HSK A52141]
          Length = 372

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 62  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 118

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 119 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 178

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 179 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 238

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 239 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 297

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 298 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 356

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 357 ISDHQTALLAELG 369


>gi|427409351|ref|ZP_18899553.1| peptide chain release factor 1 [Sphingobium yanoikuyae ATCC 51230]
 gi|425711484|gb|EKU74499.1| peptide chain release factor 1 [Sphingobium yanoikuyae ATCC 51230]
          Length = 363

 Score =  343 bits (881), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 163/309 (52%), Positives = 222/309 (71%), Gaps = 2/309 (0%)

Query: 6   ELRTKQKEIDGLKSLI--YECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           ELR  ++E+  L+ +    E   D  M +MA EE+ L   +    +  L   LLPKD AD
Sbjct: 51  ELRRLRQELRALEQMAGGEESDADPLMREMAQEEMQLLKGQLPDAERALALQLLPKDSAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S+  G+KE  A+I+
Sbjct: 111 ARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASIN 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VAILP+ +EVDV++ + DL+ID YR
Sbjct: 171 GTGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAILPEPEEVDVQIADSDLKIDIYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+PTG+ ++ QDERSQH NKAKA++VL A++YE ER R   
Sbjct: 231 ASGAGGQHVNTTDSAVRITHLPTGIVVTQQDERSQHKNKAKAMQVLRARIYEAERERTQS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ +
Sbjct: 291 EQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLAEVIDALVAE 350

Query: 304 QEMDAIASF 312
            E   +A  
Sbjct: 351 DEAARLAQL 359


>gi|15966364|ref|NP_386717.1| peptide chain release factor 1 [Sinorhizobium meliloti 1021]
 gi|384530494|ref|YP_005714582.1| Peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
 gi|384537194|ref|YP_005721279.1| peptide chain release factor 1 [Sinorhizobium meliloti SM11]
 gi|433614432|ref|YP_007191230.1| peptide chain release factor 1 [Sinorhizobium meliloti GR4]
 gi|20139338|sp|Q92MK5.1|RF1_RHIME RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15075635|emb|CAC47190.1| Probable peptide chain release factor 1 (RF-1) protein
           [Sinorhizobium meliloti 1021]
 gi|333812670|gb|AEG05339.1| Peptide chain release factor 1 [Sinorhizobium meliloti BL225C]
 gi|336034086|gb|AEH80018.1| peptide chain release factor 1 [Sinorhizobium meliloti SM11]
 gi|429552622|gb|AGA07631.1| peptide chain release factor 1 [Sinorhizobium meliloti GR4]
          Length = 360

 Score =  343 bits (881), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 167/317 (52%), Positives = 232/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++S++R  +K   E+  + +++ + + DKDM D+A  E     ++ + L+  +   LLPK
Sbjct: 45  VVSKIRAYEKATAELADIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+  KGW+ EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R+
Sbjct: 165 ATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRV 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+AKA++VL ++LY+MER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE +D  +DA
Sbjct: 284 RADSERSADRRSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-IDDVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           LL   +   +A  G  Q
Sbjct: 343 LLADYQASQLALLGERQ 359


>gi|408380658|ref|ZP_11178240.1| peptide chain release factor 1 [Agrobacterium albertimagni AOL15]
 gi|407745434|gb|EKF56968.1| peptide chain release factor 1 [Agrobacterium albertimagni AOL15]
          Length = 359

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 167/316 (52%), Positives = 234/316 (74%), Gaps = 8/316 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I E +    E DGL++++ + + D++M ++A  EL    + E R+++L   +   LLPKD
Sbjct: 49  IREYQAAIDEADGLRAMLSDKATDREMRELAEMELP---ELESRIEALGDEMQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  A
Sbjct: 106 AADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASTKGWKVEVLSASEGEAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++D+ ++ ED+RID
Sbjct: 166 TISGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDIEIKPEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKAL+VL ++LY++ER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKALQVLRSRLYDIERHK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  M+EG +LD  +DAL
Sbjct: 285 LDSERSANRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEG-DLDEMLDAL 343

Query: 301 LLQQEMDAIASFGSTQ 316
           +   +   +A  G TQ
Sbjct: 344 ISDYQAGQLAQLGETQ 359


>gi|239832947|ref|ZP_04681276.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
 gi|444311554|ref|ZP_21147161.1| peptide chain release factor 1 [Ochrobactrum intermedium M86]
 gi|239825214|gb|EEQ96782.1| peptide chain release factor 1 [Ochrobactrum intermedium LMG 3301]
 gi|443485113|gb|ELT47908.1| peptide chain release factor 1 [Ochrobactrum intermedium M86]
          Length = 357

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 167/313 (53%), Positives = 231/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKS---LLPKD 60
           I EL   ++E   L ++  + + D +M  +A EEL    + EKR+ +L  +    LLPKD
Sbjct: 49  IRELTDARREAVDLAAMRDDAATDAEMRALALEELP---EVEKRIGTLEQEVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADEKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AETERSESRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +   G
Sbjct: 344 ISDHQTALLTELG 356


>gi|424916637|ref|ZP_18340001.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM597]
 gi|392852813|gb|EJB05334.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM597]
          Length = 359

 Score =  343 bits (880), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 166/317 (52%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++LI + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKAIAELADLETLIEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER+S +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|426401185|ref|YP_007020157.1| peptide chain release factor 1 [Candidatus Endolissoclinum patella
           L2]
 gi|425857853|gb|AFX98889.1| peptide chain release factor 1 [Candidatus Endolissoclinum patella
           L2]
          Length = 356

 Score =  343 bits (879), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 162/318 (50%), Positives = 232/318 (72%), Gaps = 8/318 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE-KRLQSLLLKS------- 55
           +SE+     +I+ LK    E ++   ++D    E+   ++ E +R++S L +        
Sbjct: 39  LSEITPVVTKIENLKRAWAELADTVALVDSKDAEMNKLVESEIERIKSRLPELERDVQIL 98

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD+AD+++ ILEVRAG GG EA+LFA D+F MY+RYSQK+GW+FE++ V+E++L GY
Sbjct: 99  LLPKDEADKKNVILEVRAGIGGNEAALFAADLFSMYQRYSQKRGWRFEIMNVSENELDGY 158

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KEA A+I+GVGVY  LKFESG HRVQRVP+TE  GR+HTSA +VA+LP+A E+DV +  +
Sbjct: 159 KEAIASITGVGVYACLKFESGTHRVQRVPVTENQGRIHTSAATVAVLPEAKEIDVHIEEK 218

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D+RID YRS G+GGQH NTT+SAVR+THIPTG+ ++ QDE+SQH N+AKA++++ ++LY 
Sbjct: 219 DIRIDVYRSRGAGGQHVNTTDSAVRITHIPTGVVVTQQDEKSQHKNRAKAMRIMRSRLYN 278

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           M+R     +R+  R  Q+GSG+RSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L+ 
Sbjct: 279 MQRQASDEARAAHRKSQVGSGNRSERIRTYNFPQGRVTDHRINLTIYKLDQVINGEALNE 338

Query: 296 FIDALLLQQEMDAIASFG 313
            I+ L+   E + +A   
Sbjct: 339 LIEPLISDDEAERLAKIN 356


>gi|395785827|ref|ZP_10465555.1| peptide chain release factor 1 [Bartonella tamiae Th239]
 gi|423717278|ref|ZP_17691468.1| peptide chain release factor 1 [Bartonella tamiae Th307]
 gi|395424285|gb|EJF90472.1| peptide chain release factor 1 [Bartonella tamiae Th239]
 gi|395427493|gb|EJF93584.1| peptide chain release factor 1 [Bartonella tamiae Th307]
          Length = 360

 Score =  343 bits (879), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 162/298 (54%), Positives = 223/298 (74%), Gaps = 2/298 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L    +E+  L++++ + S DK+M  +A EEL        RL+  +   LLPKD AD
Sbjct: 49  IRALNAAYQEVLDLEAMLEDKSTDKEMRALAEEELPTIRQNISRLEQEVQILLLPKDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ++  ILE+RAGTGG EA+LFA D+F+MYERY+   GWK E+V  +E D+ GYKE  A +S
Sbjct: 109 DKSAILEIRAGTGGSEAALFAGDLFRMYERYASANGWKVEMVSASEGDVGGYKEIIATVS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +R ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIDIRQEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+L++MER R   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLFDMERQRAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            RS+ R  Q+GSGDRSERIRTYN+PQGRV+DHR+ +T + +  +M GE LD F+DAL+
Sbjct: 288 ERSQSRKSQVGSGDRSERIRTYNYPQGRVSDHRINLTLYKLDKVMMGE-LDEFVDALI 344


>gi|418403505|ref|ZP_12976993.1| peptide chain release factor 1 [Sinorhizobium meliloti CCNWSX0020]
 gi|359502565|gb|EHK75139.1| peptide chain release factor 1 [Sinorhizobium meliloti CCNWSX0020]
          Length = 360

 Score =  343 bits (879), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 167/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++S++R   K   E+  + +++ + + DKDM D+A  E     ++ + L+  +   LLPK
Sbjct: 45  VVSKIRAYAKATAELADIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+  KGW+ EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R+
Sbjct: 165 ATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRV 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+AKA++VL ++LY+MER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE +D  +DA
Sbjct: 284 RADSERSADRRSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-IDDVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           LL   +   +A  G  Q
Sbjct: 343 LLADYQASQLALLGERQ 359


>gi|118588514|ref|ZP_01545923.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
 gi|118439220|gb|EAV45852.1| peptide chain release factor 1 [Stappia aggregata IAM 12614]
          Length = 357

 Score =  343 bits (879), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 163/312 (52%), Positives = 234/312 (75%), Gaps = 8/312 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDE-EKRLQSL---LLKSLLPK 59
           I  L   ++++ G K+L+ + S D +M ++A  E     DE E+R++ L   +   LLPK
Sbjct: 47  IRALIKAEQDLAGAKALLQDPSSDAEMRELAEMER----DELEERVEELAQDVRIGLLPK 102

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+AD  D ILEVRAGTGG+EA+LFA D+F+MY+RY++ +GWK E++  +E ++ GYKE  
Sbjct: 103 DEADSNDAILEVRAGTGGDEAALFAGDLFRMYQRYAELQGWKVEILSASEGEVGGYKEVI 162

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A++SG  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA++VD+ ++  DLRI
Sbjct: 163 ASVSGENVFAKLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAEDVDIDVQESDLRI 222

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DTYR+ G+GGQH NTT+SAVR+TH+PTG+ +++QDERSQH NKA+A+++L A++Y+ ER 
Sbjct: 223 DTYRASGAGGQHVNTTDSAVRITHLPTGIVVAVQDERSQHKNKARAMQLLRARIYDEERE 282

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    R++ R  Q+GSGDRSERIRTYN+PQGRVTDHR+G+T + +  ++ GE L   I+ 
Sbjct: 283 RAASERTEARRLQVGSGDRSERIRTYNYPQGRVTDHRIGLTLYKLEQILSGEALGEVIEP 342

Query: 300 LLLQQEMDAIAS 311
           L+L  +   +A+
Sbjct: 343 LILDHQASLLAT 354


>gi|83310717|ref|YP_420981.1| protein chain release factor A [Magnetospirillum magneticum AMB-1]
 gi|119361556|sp|Q2W6V3.1|RF1_MAGMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|82945558|dbj|BAE50422.1| Protein chain release factor A [Magnetospirillum magneticum AMB-1]
          Length = 354

 Score =  343 bits (879), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 163/288 (56%), Positives = 213/288 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM D+A EE     +    L+  +   LLPKD+ADE++ I+EVRAGTGGEEA+L
Sbjct: 64  EMMNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAAL 123

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA ++F+MYERY+   GW+FEV+ V ++ + G KEASA I+G  V+ +LKFESG+HRVQR
Sbjct: 124 FAAELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQR 183

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VAI+P+A+EVD++L + DLR D YRS GSGGQ  NTT+SAVRVT
Sbjct: 184 VPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVT 243

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+ ++ Q E+SQH NKA ALK+L A+LYE ERS     R+  R  Q+GSGDRSERI
Sbjct: 244 HIPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERI 303

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           RTYNFPQGRVTDHR+ +T + I  +M G+ LD  ++AL+   + + +A
Sbjct: 304 RTYNFPQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQAERLA 351


>gi|433773052|ref|YP_007303519.1| peptide chain release factor 1 [Mesorhizobium australicum WSM2073]
 gi|433665067|gb|AGB44143.1| peptide chain release factor 1 [Mesorhizobium australicum WSM2073]
          Length = 359

 Score =  343 bits (879), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 164/310 (52%), Positives = 230/310 (74%), Gaps = 2/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           + ELR+ + E   L++++ +   D +M  +A  +L    +  + LQ  +   LLP+D AD
Sbjct: 49  VRELRSAEHEQADLEAMLADKGTDAEMRALAEADLPGVEERIETLQKDIQILLLPRDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+FE V  ++ D  G+KE  A IS
Sbjct: 109 DKNAILEIRAGTGGDEAALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+  LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +R ED+RIDT R
Sbjct: 169 GKGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIDIRAEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+AKA+++L A+LY+MERS+   
Sbjct: 229 ASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADE 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE LD  +DAL+  
Sbjct: 288 ERSESRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGE-LDEIVDALIAD 346

Query: 304 QEMDAIASFG 313
            +   +A  G
Sbjct: 347 HQSKLLADIG 356


>gi|430005302|emb|CCF21103.1| peptide chain release factor 1 [Rhizobium sp.]
          Length = 360

 Score =  342 bits (878), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 163/304 (53%), Positives = 225/304 (74%), Gaps = 2/304 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           E+  L++L+ + + D++M ++A  EL  A +  + L+  +   LLPKD ADE+  ILE+R
Sbjct: 58  EVADLRTLLADKATDREMRELAEMELPEAEERVEALEKDMQVLLLPKDAADEKSAILEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MYERY+  KGWK EV+  +E +  G++E  A +SG GV+ KLK
Sbjct: 118 AGTGGNEAALFAGDLFRMYERYAAGKGWKVEVLSASEGEAGGFREIIATVSGRGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT RS G+GGQH 
Sbjct: 178 FESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+MER +    RS  R  Q
Sbjct: 238 NTTDSAVRITHLPTGLVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQKADSERSADRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE +D  +DAL+   +   +A  
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IDEVVDALIADYQAGQLAQL 355

Query: 313 GSTQ 316
           G  Q
Sbjct: 356 GEQQ 359


>gi|15604386|ref|NP_220902.1| peptide chain release factor 1 [Rickettsia prowazekii str. Madrid
           E]
 gi|383487352|ref|YP_005405032.1| peptide chain release factor 1 [Rickettsia prowazekii str. GvV257]
 gi|383487931|ref|YP_005405610.1| peptide chain release factor 1 [Rickettsia prowazekii str.
           Chernikova]
 gi|383488777|ref|YP_005406455.1| peptide chain release factor 1 [Rickettsia prowazekii str.
           Katsinyian]
 gi|383489616|ref|YP_005407293.1| peptide chain release factor 1 [Rickettsia prowazekii str. Dachau]
 gi|383499757|ref|YP_005413118.1| peptide chain release factor 1 [Rickettsia prowazekii str.
           BuV67-CWPP]
 gi|383500593|ref|YP_005413953.1| peptide chain release factor 1 [Rickettsia prowazekii str. RpGvF24]
 gi|386082378|ref|YP_005998955.1| Peptide chain release factor RF-1 [Rickettsia prowazekii str. Rp22]
 gi|6225942|sp|Q9ZD21.1|RF1_RICPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|3861078|emb|CAA14978.1| PEPTIDE CHAIN RELEASE FACTOR 1 (prfA) [Rickettsia prowazekii str.
           Madrid E]
 gi|292572142|gb|ADE30057.1| Peptide chain release factor RF-1 [Rickettsia prowazekii str. Rp22]
 gi|380757717|gb|AFE52954.1| peptide chain release factor 1 [Rickettsia prowazekii str. GvV257]
 gi|380758290|gb|AFE53526.1| peptide chain release factor 1 [Rickettsia prowazekii str. RpGvF24]
 gi|380760810|gb|AFE49332.1| peptide chain release factor 1 [Rickettsia prowazekii str.
           Chernikova]
 gi|380761656|gb|AFE50177.1| peptide chain release factor 1 [Rickettsia prowazekii str.
           Katsinyian]
 gi|380762503|gb|AFE51023.1| peptide chain release factor 1 [Rickettsia prowazekii str.
           BuV67-CWPP]
 gi|380763339|gb|AFE51858.1| peptide chain release factor 1 [Rickettsia prowazekii str. Dachau]
          Length = 355

 Score =  342 bits (878), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 159/302 (52%), Positives = 226/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I +    + E++   +   E + D   L+M   E+    +   +L+  +  SLLPKD+AD
Sbjct: 47  IKQYNKAKSELEEANNFRLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RYS+ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+ +D+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRIPETESQGRIHTSAATVAVLPEAEGIDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A+LYE +R +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD FI+AL+  
Sbjct: 287 ERSDSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIAN 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|163843895|ref|YP_001628299.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
 gi|189039961|sp|B0CIC3.1|RF1_BRUSI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163674618|gb|ABY38729.1| peptide chain release factor 1 [Brucella suis ATCC 23445]
          Length = 359

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/313 (53%), Positives = 229/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE   
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIT 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|261323819|ref|ZP_05963016.1| peptide chain release factor 1 [Brucella neotomae 5K33]
 gi|261299799|gb|EEY03296.1| peptide chain release factor 1 [Brucella neotomae 5K33]
          Length = 372

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   + ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 62  IRELSDARMEASDVAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 118

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 119 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 178

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 179 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 238

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 239 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 297

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 298 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 356

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 357 ISDHQTALLAELG 369


>gi|87198313|ref|YP_495570.1| peptide chain release factor 1 [Novosphingobium aromaticivorans DSM
           12444]
 gi|119361571|sp|Q2GBN7.1|RF1_NOVAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|87133994|gb|ABD24736.1| bacterial peptide chain release factor 1 (bRF-1) [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 354

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 159/307 (51%), Positives = 223/307 (72%), Gaps = 5/307 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E+R  + E+  L +L     +D DM ++A EEL     E    +  L  ++LP+D AD R
Sbjct: 51  EVREMRGELVSLAAL-----DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADAR 105

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
             +LE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+ E + V  +DL GYKE  A ++G 
Sbjct: 106 PAMLEIRAGTGGDEAALFAADLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQ 165

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
           GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ DEVDV + ++DL+ID YR+ 
Sbjct: 166 GVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVAIEDKDLKIDIYRAS 225

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQH NTT+SAVR+TH+P+G+ ++ QDERSQH NKAKA++VL  +LY+M R     + 
Sbjct: 226 GAGGQHVNTTDSAVRITHLPSGLVVTCQDERSQHKNKAKAMQVLRTRLYDMRREAAQGAE 285

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           ++ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ + +
Sbjct: 286 AEARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLAELIDALIAEDQ 345

Query: 306 MDAIASF 312
              +A+ 
Sbjct: 346 SKRLAAM 352


>gi|56416889|ref|YP_153963.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222475254|ref|YP_002563670.1| peptide chain release factor 1 [Anaplasma marginale str. Florida]
 gi|255003238|ref|ZP_05278202.1| peptide chain release factor 1 [Anaplasma marginale str. Puerto
           Rico]
 gi|255004365|ref|ZP_05279166.1| peptide chain release factor 1 [Anaplasma marginale str. Virginia]
 gi|81599140|sp|Q5PAH2.1|RF1_ANAMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790858|sp|B9KIV2.1|RF1_ANAMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56388121|gb|AAV86708.1| peptide chain release factor 1 [Anaplasma marginale str. St.
           Maries]
 gi|222419391|gb|ACM49414.1| peptide chain release factor 1 (prfA) [Anaplasma marginale str.
           Florida]
          Length = 359

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 166/314 (52%), Positives = 225/314 (71%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI E +T QKEI+ L+ LI     D +++ +A EEL        +L+  L  SLLPKD
Sbjct: 46  MSLIEEYQTAQKEIEELEGLINSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R  ILE+RAGTGGEEA+LF  D+++MY +Y+++K WK E +G++ + + GYKEAS 
Sbjct: 106 KDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASL 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 CIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIPTG+ +  QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I    SK+R  QIGSGDRSERIRTYNF Q R+TDHR+ +T + +  +M+  +LD F+DAL
Sbjct: 286 IEDEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDAL 345

Query: 301 LLQQEMDAIASFGS 314
           +   + + +    S
Sbjct: 346 IADDQANKLQQISS 359


>gi|294010049|ref|YP_003543509.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
 gi|292673379|dbj|BAI94897.1| peptide chain release factor RF-1 [Sphingobium japonicum UT26S]
          Length = 363

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 160/309 (51%), Positives = 222/309 (71%), Gaps = 2/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           E+R  ++E+  L+ +      D D  M +MA EE+ L        +  L   LLPKD AD
Sbjct: 51  EVRRLRQELSALEYMAGGEDADSDPLMREMAQEEMQLIKSRLPDAERALALQLLPKDAAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S++ GYKE  A+++
Sbjct: 111 ARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGYKEVVASVT 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ +EVDV++ + DL+ID YR
Sbjct: 171 GTGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADSDLKIDIYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+P+G+ ++ QDERSQH NKAKA++VL A++YE ER R   
Sbjct: 231 ASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEAERERAQS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ +
Sbjct: 291 EQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAE 350

Query: 304 QEMDAIASF 312
            E   +A  
Sbjct: 351 DEAARLAQL 359


>gi|254995073|ref|ZP_05277263.1| peptide chain release factor 1 [Anaplasma marginale str.
           Mississippi]
          Length = 359

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 225/314 (71%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M L+ E +T QKEI+ L+ LI     D +++ +A EEL        +L+  L  SLLPKD
Sbjct: 46  MSLVEEYQTAQKEIEELEGLINSTDTDAELVHLAKEELYTKQKLIPKLKHQLQLSLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R  ILE+RAGTGGEEA+LF  D+++MY +Y+++K WK E +G++ + + GYKEAS 
Sbjct: 106 KDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASL 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 CIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIPTG+ +  QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I    SK+R  QIGSGDRSERIRTYNF Q R+TDHR+ +T + +  +M+  +LD F+DAL
Sbjct: 286 IEDEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDAL 345

Query: 301 LLQQEMDAIASFGS 314
           +   + + +    S
Sbjct: 346 IADDQANKLQQISS 359


>gi|261758813|ref|ZP_06002522.1| peptide chain release factor 1 [Brucella sp. F5/99]
 gi|261738797|gb|EEY26793.1| peptide chain release factor 1 [Brucella sp. F5/99]
          Length = 359

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 167/313 (53%), Positives = 229/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 49  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+  LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 ISDHQTALLAELG 356


>gi|209551100|ref|YP_002283017.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|238054472|sp|B5ZRR4.1|RF1_RHILW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209536856|gb|ACI56791.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 359

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKAIAELADLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER+S +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|334317369|ref|YP_004549988.1| peptide chain release factor 1 [Sinorhizobium meliloti AK83]
 gi|334096363|gb|AEG54374.1| Peptide chain release factor 1 [Sinorhizobium meliloti AK83]
          Length = 360

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 166/317 (52%), Positives = 232/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++S++R  +K   E+  + +++ + + DKDM D+A  E     ++ + L+  +   LLPK
Sbjct: 45  VVSKIRAYEKATAELADIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA ++F+MYERY+  KGW+ EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGNLFRMYERYAASKGWRVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R+
Sbjct: 165 ATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRV 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+AKA++VL ++LY+MER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE +D  +DA
Sbjct: 284 RADSERSADRRSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-IDDVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           LL   +   +A  G  Q
Sbjct: 343 LLADYQASQLALLGERQ 359


>gi|13472970|ref|NP_104537.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
 gi|20139342|sp|Q98G93.1|RF1_RHILO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|14023718|dbj|BAB50323.1| peptide chain release factor 1 [Mesorhizobium loti MAFF303099]
          Length = 359

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 164/313 (52%), Positives = 234/313 (74%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           + +LR+ + E   L++++ +   D +M  +A  +L    D E+R+++L   +   LLPKD
Sbjct: 49  VRQLRSAEHEQADLEAMLADKGTDAEMRALAEADLP---DVEERIEALQKDIQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+FE V  ++ D  G+KE  A
Sbjct: 106 AADDKNAILEIRAGTGGDEAALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+  LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +R ED+RID
Sbjct: 166 TVSGKGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIEIRAEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+AKA+++L A+LY++ERS+
Sbjct: 226 TMRASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE LD  +DAL
Sbjct: 285 ADEERSESRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGE-LDEIVDAL 343

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 344 IADHQSKLLADIG 356


>gi|378827170|ref|YP_005189902.1| Peptide chain release factor 1 RF-1 [Sinorhizobium fredii HH103]
 gi|365180222|emb|CCE97077.1| Peptide chain release factor 1 RF-1 [Sinorhizobium fredii HH103]
          Length = 360

 Score =  342 bits (877), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 170/323 (52%), Positives = 235/323 (72%), Gaps = 17/323 (5%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMA------TEELCLAIDEEKRLQSLLL 53
           +++++R  +K   E+  ++ L+ + + DKDM D+A       EE   A+++E  +Q LLL
Sbjct: 45  VVTKIRAYEKATAELADIEVLLADRATDKDMRDLAEMERPEVEERIEALEQE--IQILLL 102

Query: 54  KSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLR 113
               PKD ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+  KGW+ EV+  +E +  
Sbjct: 103 ----PKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAGKGWRVEVLSASEGEAG 158

Query: 114 GYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLR 173
           GYKE  A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R
Sbjct: 159 GYKEIIATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIEIR 218

Query: 174 NEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKL 233
            ED+RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++L
Sbjct: 219 AEDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRL 277

Query: 234 YEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL 293
           ++MER R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE +
Sbjct: 278 FDMERQRADSERSADRKSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-I 336

Query: 294 DIFIDALLLQQEMDAIASFGSTQ 316
           D  +DALL   +   +A  G  Q
Sbjct: 337 DEVVDALLADHQASQLALLGERQ 359


>gi|116254019|ref|YP_769857.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119361588|sp|Q1MBB2.1|RF1_RHIL3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115258667|emb|CAK09771.1| putative peptide chain release factor 1 [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 359

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRVYEKAVTELADLETLLEDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|269958696|ref|YP_003328483.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
 gi|269848525|gb|ACZ49169.1| peptide chain release factor 1 [Anaplasma centrale str. Israel]
          Length = 359

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 225/314 (71%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M L+ E +T QKEI+ L+ LI     D +++ +A EEL        +L+  L  SLLPKD
Sbjct: 46  MSLVEEYQTAQKEIEELEGLINSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R  ILE+RAGTGGEEA+LF  D+++MY +Y+++K WK E +G++ + + GYKEAS 
Sbjct: 106 KDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASL 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 CIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIPTG+ +  QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I    SK+R  QIGSGDRSERIRTYNF Q R+TDHR+ +T + +  +M+  +LD F+DAL
Sbjct: 286 IEDEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDAL 345

Query: 301 LLQQEMDAIASFGS 314
           +   + + +    S
Sbjct: 346 IADDQANKLQQISS 359


>gi|265996886|ref|ZP_06109443.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
 gi|262551354|gb|EEZ07344.1| peptide chain release factor 1 [Brucella ceti M490/95/1]
          Length = 372

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/313 (53%), Positives = 229/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 62  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 118

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 119 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 178

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+  LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 179 TVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 238

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 239 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 297

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 298 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 356

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 357 ISDHQTALLAELG 369


>gi|225628073|ref|ZP_03786108.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|261220926|ref|ZP_05935207.1| peptide chain release factor 1 [Brucella ceti B1/94]
 gi|225616898|gb|EEH13945.1| peptide chain release factor 1 [Brucella ceti str. Cudo]
 gi|260919510|gb|EEX86163.1| peptide chain release factor 1 [Brucella ceti B1/94]
          Length = 377

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 167/313 (53%), Positives = 229/313 (73%), Gaps = 8/313 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 67  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 123

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 124 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 183

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+  LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 184 TVSGKGVFSTLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 243

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 244 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 302

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  +DAL
Sbjct: 303 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 361

Query: 301 LLQQEMDAIASFG 313
           +   +   +A  G
Sbjct: 362 ISDHQTALLAELG 374


>gi|381199262|ref|ZP_09906412.1| peptide chain release factor 1 [Sphingobium yanoikuyae XLDN2-5]
          Length = 363

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 162/309 (52%), Positives = 222/309 (71%), Gaps = 2/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           E+R  ++E+  L+ +      D D  M +MA EE+ L   +    +  L   LLPKD AD
Sbjct: 51  EVRRLRQELRALEQMAGGEDSDADPLMREMAQEEMQLLKGQLPDAERALALQLLPKDSAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S+  G+KE  A+I+
Sbjct: 111 ARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASIN 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VAILP+ +EVDV++ + DL+ID YR
Sbjct: 171 GTGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAILPEPEEVDVQIADSDLKIDIYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+PTG+ ++ QDERSQH NKAKA++VL A++YE ER R   
Sbjct: 231 ASGAGGQHVNTTDSAVRITHLPTGIVVTQQDERSQHKNKAKAMQVLRARIYEAERERTQS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ +
Sbjct: 291 EQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLAEVIDALVAE 350

Query: 304 QEMDAIASF 312
            E   +A  
Sbjct: 351 DEAARLAQL 359


>gi|424886546|ref|ZP_18310154.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2012]
 gi|393175897|gb|EJC75939.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2012]
          Length = 359

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKANAELADLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 105 DTADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|103488191|ref|YP_617752.1| peptide chain release factor 1 [Sphingopyxis alaskensis RB2256]
 gi|119361612|sp|Q1GPK3.1|RF1_SPHAL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|98978268|gb|ABF54419.1| bacterial peptide chain release factor 1 (bRF-1) [Sphingopyxis
           alaskensis RB2256]
          Length = 355

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 155/293 (52%), Positives = 215/293 (73%), Gaps = 1/293 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           + E   D +M  MA EE+          +  L   LLPKD AD R  +LE+RAGTGG+EA
Sbjct: 63  LNEMLADPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAGTGGDEA 122

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA D+ +MY RY+  +GWK E++   E+++ GYKE  A++SG GV+ KLKFESG+HRV
Sbjct: 123 ALFAGDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFESGVHRV 182

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QRVP+TE  GR+HTSA +VA+LP+A+EVDV + + DL+ID YR+ G+GGQH NTT+SA+R
Sbjct: 183 QRVPVTESGGRIHTSAATVAVLPEAEEVDVAINDSDLKIDIYRASGAGGQHVNTTDSAIR 242

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +THIPTG+ +  QD+RSQH N+AKA++VL A+LY++ER ++H + +  R   +GSGDRSE
Sbjct: 243 ITHIPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLEREKLHSAEASARKSMVGSGDRSE 302

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RIRTYNFPQGRVTDHR+ +T H + +++EG  +D  IDAL+ + +   +A  G
Sbjct: 303 RIRTYNFPQGRVTDHRINLTLHRLPEILEG-AMDELIDALIAEDQAQRLAGLG 354


>gi|424872524|ref|ZP_18296186.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           WSM1455]
 gi|393168225|gb|EJC68272.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           WSM1455]
          Length = 359

 Score =  342 bits (876), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKAIAELADLETLLEDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|417861352|ref|ZP_12506407.1| peptide chain release factor 1 [Agrobacterium tumefaciens F2]
 gi|338821756|gb|EGP55725.1| peptide chain release factor 1 [Agrobacterium tumefaciens F2]
          Length = 360

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 168/304 (55%), Positives = 226/304 (74%), Gaps = 10/304 (3%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLA---IDE-EKRLQSLLLKSLLPKDDADERDCILEVR 72
           L++L+ + + DKDM D+A  EL      I E EK +Q LLL    PKD ADE+  ILE+R
Sbjct: 62  LEALLADKTTDKDMRDLAEMELPEVESRISELEKDMQVLLL----PKDAADEKSAILEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYERFASTKGWKVEVLSASEGEAGGYKEIIATISGRGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++D+ +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDIEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY++ER ++   RS  R  Q
Sbjct: 238 NTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQKVDNERSADRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  M+EGE +D  +DAL+   +   +A  
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEGE-IDELLDALIADYQAGQLAQL 355

Query: 313 GSTQ 316
           G  Q
Sbjct: 356 GEQQ 359


>gi|51473710|ref|YP_067467.1| peptide chain release factor 1 [Rickettsia typhi str. Wilmington]
 gi|383752487|ref|YP_005427587.1| peptide chain release factor 1 [Rickettsia typhi str. TH1527]
 gi|383843322|ref|YP_005423825.1| peptide chain release factor 1 [Rickettsia typhi str. B9991CWPP]
 gi|61214605|sp|Q68WK7.1|RF1_RICTY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51460022|gb|AAU03985.1| peptide chain release factor 1 (RF-1) [Rickettsia typhi str.
           Wilmington]
 gi|380759130|gb|AFE54365.1| peptide chain release factor 1 [Rickettsia typhi str. TH1527]
 gi|380759969|gb|AFE55203.1| peptide chain release factor 1 [Rickettsia typhi str. B9991CWPP]
          Length = 355

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 225/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +L  E + D   L+M   E+ +  +   +L+  +  SLLPKD+AD
Sbjct: 47  IKEYNKVKSELEEANNLRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++ + + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+ VD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEGVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A+LYE +R +   
Sbjct: 227 SSGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNF  GRV+DHR+ +T + I ++++   LD FI+AL+  
Sbjct: 287 ERSDSRRWQVGSGDRSERIRTYNFLHGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIAN 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|381166791|ref|ZP_09876005.1| peptide chain release factor 1 [Phaeospirillum molischianum DSM
           120]
 gi|380684364|emb|CCG40817.1| peptide chain release factor 1 [Phaeospirillum molischianum DSM
           120]
          Length = 358

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 163/307 (53%), Positives = 222/307 (72%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  + E+     ++ + S D DM  MA EE     +    L+  +   LLPKD+AD
Sbjct: 49  IVTFRKSRDEMAEAAVMMQDASADPDMRAMAEEEFFALKERLPDLERAVQIMLLPKDEAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E++ ILEVRAGTGG+EA+LFA ++F+MYERYS  KGW+FEV+   ++ + G +EASA I+
Sbjct: 109 EKNAILEVRAGTGGDEAALFAAELFRMYERYSGLKGWRFEVLDANDTGIGGVREASAKIT 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+++  +DLR+D YR
Sbjct: 169 GRGVFARLKFESGAHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIQIDEKDLRVDVYR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S GSGGQ  NTT+SAVRVTHIPTG+ ++ Q E+SQH NKA A+ +L ++LYE +RS +  
Sbjct: 229 SQGSGGQSVNTTDSAVRVTHIPTGLAVACQQEKSQHKNKATAMTLLRSRLYERQRSALDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + I  +M G+ LD  ++AL+  
Sbjct: 289 ERAANRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDAVMAGDALDEVVEALIAT 348

Query: 304 QEMDAIA 310
            + + +A
Sbjct: 349 DQAERLA 355


>gi|383481611|ref|YP_005390526.1| peptide chain release factor 1 [Rickettsia rhipicephali str.
           3-7-female6-CWPP]
 gi|378933950|gb|AFC72453.1| peptide chain release factor 1 [Rickettsia rhipicephali str.
           3-7-female6-CWPP]
          Length = 361

 Score =  341 bits (875), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 228/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIQIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I+++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKINEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|390169627|ref|ZP_10221560.1| peptide chain release factor 1 [Sphingobium indicum B90A]
 gi|389587631|gb|EIM65693.1| peptide chain release factor 1 [Sphingobium indicum B90A]
          Length = 363

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 158/309 (51%), Positives = 224/309 (72%), Gaps = 2/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           E+R  ++E+  L+ +      D D  M +MA EE+ L        +  L   LLP+D AD
Sbjct: 51  EVRRLRQELSALEYMAGGEDADADPLMREMAQEEMQLIKSRLPDAERALALQLLPRDAAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S++ G+KE  A+++
Sbjct: 111 ARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADAQGWKMELISANASEVGGFKEVVASVT 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G+GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ +EVDV++ + DL+ID YR
Sbjct: 171 GIGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPEEVDVQIADSDLKIDIYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+P+G+ ++ QDERSQH NKAKA++VL A++YE+ER R   
Sbjct: 231 ASGAGGQHVNTTDSAVRITHLPSGIVVTQQDERSQHKNKAKAMQVLRARIYEVERERAQS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ +
Sbjct: 291 EQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLSEVIDALVAE 350

Query: 304 QEMDAIASF 312
            E   +A  
Sbjct: 351 DEAARLAQL 359


>gi|402490003|ref|ZP_10836796.1| peptide chain release factor 1 [Rhizobium sp. CCGE 510]
 gi|401811342|gb|EJT03711.1| peptide chain release factor 1 [Rhizobium sp. CCGE 510]
          Length = 359

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 163/317 (51%), Positives = 232/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKAIAELADLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK E +  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEALSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGKGVFAKLKFESGVHRVQRVPATEAGGRIHTSAATVAVLPEAEEIDIEIRQEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|395491365|ref|ZP_10422944.1| peptide chain release factor 1 [Sphingomonas sp. PAMC 26617]
          Length = 357

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 164/310 (52%), Positives = 229/310 (73%), Gaps = 9/310 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCL---AIDEEKRLQSLLLKSLLPKDDA 62
           E+R  + E+  L  +  E  +D ++  MA EE+      + + +R  SL   +LLP+D A
Sbjct: 52  EVRRLRAELGVLAGM--EADDDPEIKTMAREEIEAIRGTLPDAERALSL---ALLPRDAA 106

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER  +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GWK E++  + S+  G+KEA A++
Sbjct: 107 DERAAMLEIRAGTGGDEAALFAADLFRMYQRYAEGQGWKVELISASSSESGGFKEAIASV 166

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV++ ++DLRID Y
Sbjct: 167 EGKGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDVKIDDKDLRIDVY 226

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G GGQ  NTT+SAVR+ HIPTG+T+  QDE+SQH N+AKA+KVL  +LYE ER R+H
Sbjct: 227 RSSGPGGQSVNTTDSAVRIVHIPTGLTVIQQDEKSQHKNRAKAMKVLRTRLYEAERERLH 286

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
             R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + ++++GE ++  + AL+ 
Sbjct: 287 TERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILQGE-MEELLGALIA 345

Query: 303 QQEMDAIASF 312
           Q E + +AS 
Sbjct: 346 QDEAERLASL 355


>gi|119361587|sp|Q2K3T1.2|RF1_RHIEC RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 359

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 166/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL       + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKAVAELADLETLLEDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|383312620|ref|YP_005365421.1| peptide chain release factor 1 [Candidatus Rickettsia amblyommii
           str. GAT-30V]
 gi|378931280|gb|AFC69789.1| peptide chain release factor 1 [Candidatus Rickettsia amblyommii
           str. GAT-30V]
          Length = 355

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLSKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIADKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERANSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|406706711|ref|YP_006757064.1| peptide chain release factor 1 (bRF-1) [alpha proteobacterium
           HIMB5]
 gi|406652487|gb|AFS47887.1| bacterial peptide chain release factor 1 (bRF-1) [alpha
           proteobacterium HIMB5]
          Length = 356

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 161/289 (55%), Positives = 217/289 (75%), Gaps = 5/289 (1%)

Query: 25  SEDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
           +E K M +   EEL L  D+ EK+L+  LL    PKD+AD+++ I+E+RAGTGG EASLF
Sbjct: 72  NEIKSMAEQELEELKLKYDKSEKKLKFFLL----PKDEADKKNAIIEIRAGTGGLEASLF 127

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+FKMYE+   KK W  E++ +++S+  G KE  A+I G  +Y  LK+ESG+HRVQRV
Sbjct: 128 AGDLFKMYEKVCNKKKWSLELISISKSEAGGLKEVIASIRGSNIYSTLKYESGVHRVQRV 187

Query: 144 PLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
           P TE  GRVHTSA +VA+LP+A+EVDV++ + DLRID +R+GG GGQ  NTT+SAVR+TH
Sbjct: 188 PDTETQGRVHTSAATVAVLPEAEEVDVKINDSDLRIDVFRAGGPGGQSVNTTDSAVRITH 247

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+++S QDE+SQH NKAK +K+L +++YE ERSRI   RSK R  +IG+GDRSERIR
Sbjct: 248 IPTGISVSQQDEKSQHKNKAKGMKILRSRIYEFERSRIDQERSKDRKTKIGTGDRSERIR 307

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYNFPQGRVTDHR+ +T H + + +EGE  D  I+ L LQ + ++++  
Sbjct: 308 TYNFPQGRVTDHRINLTLHKLEEFLEGEAFDEMIETLTLQAQEESLSKL 356


>gi|408786054|ref|ZP_11197793.1| peptide chain release factor 1 [Rhizobium lupini HPC(L)]
 gi|424908657|ref|ZP_18332034.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           USDA 2370]
 gi|392844688|gb|EJA97210.1| peptide chain release factor 1 [Rhizobium leguminosarum bv. viciae
           USDA 2370]
 gi|408487924|gb|EKJ96239.1| peptide chain release factor 1 [Rhizobium lupini HPC(L)]
          Length = 359

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 13/318 (4%)

Query: 3   LISELRTKQKEID---GLKSLIYECSEDKDMLDMATEELC---LAIDE-EKRLQSLLLKS 55
           ++ ++R  +K I     L++L+ + + DKDM ++A  EL      I+E EK +Q LLL  
Sbjct: 45  VVKKIREYEKAISEAADLEALLADKTTDKDMRELAEMELPEIESRIEELEKDMQVLLL-- 102

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
             PKD ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GY
Sbjct: 103 --PKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAASKGWKVEVLSASEGEAGGY 160

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A ISG GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R E
Sbjct: 161 KEIIATISGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIEIRPE 220

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D+RIDT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+
Sbjct: 221 DIRIDTMRASGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYD 279

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           +ER ++   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  M+EGE +D 
Sbjct: 280 IERQKVDSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEGE-IDE 338

Query: 296 FIDALLLQQEMDAIASFG 313
            +DAL+   +   +A  G
Sbjct: 339 LVDALIADYQAGQLAQLG 356


>gi|359789213|ref|ZP_09292167.1| peptide chain release factor 1 [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359254954|gb|EHK57912.1| peptide chain release factor 1 [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 358

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 163/298 (54%), Positives = 224/298 (75%), Gaps = 2/298 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I ELR  ++E   L++++ +   D +M  +A  EL    +  + LQ  +   LLP+D AD
Sbjct: 49  IRELRAAEQEEADLQAMLADKGTDAEMRSLAEAELPAVEERIEALQKDIQILLLPRDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E++ ILE+RAGTGG+EA+LFA D+F+MYERY+  +GWK EV   +E +  GYKE  A +S
Sbjct: 109 EKNAILEIRAGTGGDEAALFAGDLFRMYERYAAARGWKMEVASASEGEAGGYKEIIATVS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+  LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +R+ED+RIDT R
Sbjct: 169 GRGVFAHLKFESGVHRVQRVPETEGSGRIHTSAATVAVLPEAEEVDIEIRSEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+A+A+++L A+L++MERSR   
Sbjct: 229 ASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRARAMQILRARLFDMERSRADT 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE LD  + AL+
Sbjct: 288 ERSESRRLQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGE-LDELVSALI 344


>gi|374319360|ref|YP_005065859.1| Peptide chain release factor RF-1 [Rickettsia slovaca 13-B]
 gi|383751342|ref|YP_005426443.1| peptide chain release factor 1 [Rickettsia slovaca str. D-CWPP]
 gi|360041909|gb|AEV92291.1| Peptide chain release factor RF-1 [Rickettsia slovaca 13-B]
 gi|379774356|gb|AFD19712.1| peptide chain release factor 1 [Rickettsia slovaca str. D-CWPP]
          Length = 355

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENALPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGKLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|238650227|ref|YP_002916078.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
 gi|259585243|sp|C4K0C9.1|RF1_RICPU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238624325|gb|ACR47031.1| peptide chain release factor 1 [Rickettsia peacockii str. Rustic]
          Length = 355

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|254455525|ref|ZP_05068954.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082527|gb|EDZ59953.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 357

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 227/302 (75%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+   L++++ + S D+++  +A  EL    DE +R +  L   LLPKD+AD+++ I+E
Sbjct: 55  EKDKKELENILNDNSVDEELKKLADTELLELKDEYERNEKKLKLFLLPKDEADKKNAIIE 114

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG EASLFA D+FKMYE+ S KK W  E++ ++ SD  G KE  A+I G  +Y  
Sbjct: 115 IRAGTGGLEASLFASDLFKMYEKVSHKKKWALELISISRSDAGGLKEVIASIKGTNIYST 174

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           LK+ESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVD+++   DLRID +R+GG GGQ
Sbjct: 175 LKYESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDLKINEADLRIDVFRAGGPGGQ 234

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+T+S QDE+SQH NKAK +K+L ++LYE+ERSRI   RS+ R 
Sbjct: 235 SVNTTDSAVRITHIPTGLTVSQQDEKSQHKNKAKGMKILRSRLYELERSRIDQERSQDRK 294

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            +IG+GDRSERIRTYNFPQGRVTDHR+ +T H + + +EGE  D  I++L LQ + D+++
Sbjct: 295 TKIGTGDRSERIRTYNFPQGRVTDHRINLTLHRLEEFLEGEAFDEMIESLTLQAQEDSLS 354

Query: 311 SF 312
           + 
Sbjct: 355 NL 356


>gi|34580401|ref|ZP_00141881.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
 gi|383484025|ref|YP_005392938.1| peptide chain release factor 1 [Rickettsia parkeri str. Portsmouth]
 gi|28261786|gb|EAA25290.1| peptide chain release factor RF-1 [Rickettsia sibirica 246]
 gi|378936379|gb|AFC74879.1| peptide chain release factor 1 [Rickettsia parkeri str. Portsmouth]
          Length = 355

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|383482240|ref|YP_005391154.1| peptide chain release factor 1 [Rickettsia montanensis str. OSU
           85-930]
 gi|378934594|gb|AFC73095.1| peptide chain release factor 1 [Rickettsia montanensis str. OSU
           85-930]
          Length = 361

 Score =  341 bits (874), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 158/283 (55%), Positives = 220/283 (77%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D   L+M  +E+    +   +L+  +  +LLPKDDAD +  I+EVRAG+GGEEA+L
Sbjct: 66  EVGLDNATLEMIKDEIHTLENSLPKLERAVKIALLPKDDADSKSAIIEVRAGSGGEEAAL 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I G  V+ KLKFESG+HRVQR
Sbjct: 126 FAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR+ G+GGQH NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +    R+  R  Q+GSGDRSERI
Sbjct: 246 HIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQERADSRRGQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           RTYNFPQGRV+DHR+ +T H I ++++   LD F++AL+   E
Sbjct: 306 RTYNFPQGRVSDHRINLTLHKIDEVVKNGQLDEFVEALIADDE 348


>gi|398382459|ref|ZP_10540544.1| peptide chain release factor 1 [Sphingobium sp. AP49]
 gi|397726565|gb|EJK86998.1| peptide chain release factor 1 [Sphingobium sp. AP49]
          Length = 363

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 162/309 (52%), Positives = 222/309 (71%), Gaps = 2/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           E+R  ++E+  L+ +      D D  M +MA EE+ L   +    +  L   LLPKD AD
Sbjct: 51  EVRRLRQELRALEQMAGGEDSDADPLMREMAQEEMQLLKGQLPDAERALALQLLPKDSAD 110

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  +LE+RAGTGG+EA+LFA D+F+MY+RY+  +GWK E++    S+  G+KE  A+I+
Sbjct: 111 ARPAMLEIRAGTGGDEAALFAGDLFRMYQRYADTQGWKMEMLSANASEQGGFKEVVASIN 170

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VAILP+ +EVDV++ + DL+ID YR
Sbjct: 171 GTGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAILPEPEEVDVQIADGDLKIDIYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+PTG+ ++ QDERSQH NKAKA++VL A++YE ER R   
Sbjct: 231 ASGAGGQHVNTTDSAVRITHLPTGIVVTQQDERSQHKNKAKAMQVLRARIYEAERERTQS 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            ++  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ +
Sbjct: 291 EQAGARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTMHRLPEILEGPGLVEVIDALVAE 350

Query: 304 QEMDAIASF 312
            E   +A  
Sbjct: 351 DEAARLAQL 359


>gi|86359340|ref|YP_471232.1| peptide chain release factor 1 [Rhizobium etli CFN 42]
 gi|86283442|gb|ABC92505.1| peptide chain release factor 1 protein [Rhizobium etli CFN 42]
          Length = 351

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 166/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL       + L+  +   LLPK
Sbjct: 37  VVTKIRAYEKAVAELADLETLLEDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPK 96

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 97  DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEII 156

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 157 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 216

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 217 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 275

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 276 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 334

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 335 LMADYQASQLAQLGEQQ 351


>gi|15890803|ref|NP_356475.1| peptide chain release factor 1 [Agrobacterium fabrum str. C58]
 gi|22096038|sp|Q8U8B8.1|RF1_AGRT5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15159088|gb|AAK89260.1| peptide chain release factor 1 [Agrobacterium fabrum str. C58]
          Length = 360

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQKEID---GLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++ ++R  +K I     L++L+ + + DKDM D+A  EL       + L+  +   LLPK
Sbjct: 45  VVKKIRDYEKAISEAADLEALLADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RI
Sbjct: 165 ATITGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY++ER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           ++   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE +D  +DA
Sbjct: 284 KVDSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGE-IDELVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LIADYQAGQLAQLGEQQ 359


>gi|395767004|ref|ZP_10447542.1| peptide chain release factor 1 [Bartonella doshiae NCTC 12862]
 gi|395415616|gb|EJF82050.1| peptide chain release factor 1 [Bartonella doshiae NCTC 12862]
          Length = 359

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 169/314 (53%), Positives = 232/314 (73%), Gaps = 11/314 (3%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +I+ +RT      EI  L+++I +   D +M  +A EEL L   + ++L+  L   LLPK
Sbjct: 45  IITSIRTLNALSIEITELETIIRDKLTDVEMRILAQEELPLLYQKVEQLEKELQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE++ I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV + E ++ GYKE  
Sbjct: 105 DIADEKNAIIEIRAGTGGSEAALFAGDLFRMYERYACTHHWKVEVVSLNEGEVGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ KLKFESG+HRVQR+P TE SGR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATVSGKGVFSKLKFESGVHRVQRIPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           +I   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  IDA
Sbjct: 284 KIESERSVSRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDTLIDA 342

Query: 300 LL------LQQEMD 307
           L+      L  EMD
Sbjct: 343 LISDHQTALLTEMD 356


>gi|67459154|ref|YP_246778.1| peptide chain release factor 1 [Rickettsia felis URRWXCal2]
 gi|75536414|sp|Q4ULG0.1|RF1_RICFE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|67004687|gb|AAY61613.1| Peptide chain release factor RF-1 [Rickettsia felis URRWXCal2]
          Length = 355

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|404251678|ref|ZP_10955646.1| peptide chain release factor 1 [Sphingomonas sp. PAMC 26621]
          Length = 357

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 166/312 (53%), Positives = 229/312 (73%), Gaps = 13/312 (4%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEEL-----CLAIDEEKRLQSLLLKSLLPKD 60
           E+R  + E+  L  +  E  +D ++  MA EE+      L + E  R  SL   +LLP+D
Sbjct: 52  EVRRLRAELGVLAGM--EADDDPEIKTMAREEIEAIRGTLPVAE--RALSL---ALLPRD 104

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADER  +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GWK E++  + S+  G+KEA A
Sbjct: 105 AADERAAMLEIRAGTGGDEAALFAADLFRMYQRYAEGQGWKVELISASSSESGGFKEAIA 164

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           ++ G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV++ ++DLRID
Sbjct: 165 SVEGKGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDVKIDDKDLRID 224

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+ HIPTG+T+  QDE+SQH N+AKA+KVL  +LYE ER R
Sbjct: 225 VYRSSGPGGQSVNTTDSAVRIVHIPTGLTVIQQDEKSQHKNRAKAMKVLRTRLYEAERER 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H  R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + ++++GE ++  + AL
Sbjct: 285 LHSERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILQGE-MEELLGAL 343

Query: 301 LLQQEMDAIASF 312
           + Q E + +AS 
Sbjct: 344 IAQDEAERLASL 355


>gi|420242577|ref|ZP_14746605.1| peptide chain release factor 1 [Rhizobium sp. CF080]
 gi|398066813|gb|EJL58364.1| peptide chain release factor 1 [Rhizobium sp. CF080]
          Length = 360

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 167/316 (52%), Positives = 228/316 (72%), Gaps = 8/316 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I E      E+  L++++ +   D++M ++A  EL  A   E+RL+ L   +   LLPKD
Sbjct: 49  IREYEKSIAEVADLRAMLTDKGTDREMRELAEMELPEA---EERLEGLEKDMQLLLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADER  ILE+RAGTGG EA+LFA D+F+MYERY+  KGWK EV+  +E +  GYKE  A
Sbjct: 106 AADERSAILEIRAGTGGNEAALFAGDLFRMYERYAATKGWKVEVLSASEGEAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ++G GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA++P+A+E+D+ +R ED+RID
Sbjct: 166 TVTGRGVFSKLKFESGVHRVQRVPDTEASGRIHTSAATVAVMPEAEEIDIEIRPEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL  +LY+MER +
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHMPSGIVVT-SSEKSQHQNRAKAMQVLRTRLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEG ++D  +DAL
Sbjct: 285 ADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEG-DIDEVVDAL 343

Query: 301 LLQQEMDAIASFGSTQ 316
           +   +   +A  G  Q
Sbjct: 344 ISDYQAGQLAQLGEQQ 359


>gi|157964580|ref|YP_001499404.1| peptide chain release factor 1 [Rickettsia massiliae MTU5]
 gi|379713807|ref|YP_005302145.1| peptide chain release factor 1 [Rickettsia massiliae str. AZT80]
 gi|166977368|sp|A8F1S1.1|RF1_RICM5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157844356|gb|ABV84857.1| Peptide chain release factor RF-1 [Rickettsia massiliae MTU5]
 gi|376334453|gb|AFB31685.1| peptide chain release factor 1 [Rickettsia massiliae str. AZT80]
          Length = 361

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIQIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|452963309|gb|EME68385.1| protein chain release factor A [Magnetospirillum sp. SO-1]
          Length = 354

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 161/288 (55%), Positives = 213/288 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM D+A EE     +    L+  +   LLPKD+ADE++ I+EVRAGTGGEEA+L
Sbjct: 64  EMMNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAAL 123

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA ++F+MYERY+   GW+FEV+ V ++ + G KEASA I+G  V+ +LKFESG+HRVQR
Sbjct: 124 FAAELFRMYERYASLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQR 183

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VAI+P+A+EVD++L + +LR D YRS GSGGQ  NTT+SAVRVT
Sbjct: 184 VPATESQGRIHTSAATVAIMPEAEEVDIQLNDSELRFDVYRSQGSGGQSVNTTDSAVRVT 243

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ ++ Q E+SQH NKA ALK+L A+LYE ERS     R+  R  Q+GSGDRSERI
Sbjct: 244 HLPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERI 303

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           RTYNFPQGRVTDHR+ +T + I  +M G+ LD  ++AL+   + + +A
Sbjct: 304 RTYNFPQGRVTDHRINMTLYKIDAVMSGDALDEMVEALVAADQAERLA 351


>gi|418299950|ref|ZP_12911780.1| peptide chain release factor 1 [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355534513|gb|EHH03821.1| peptide chain release factor 1 [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 359

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 170/314 (54%), Positives = 228/314 (72%), Gaps = 10/314 (3%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELC---LAIDE-EKRLQSLLLKSLLPK 59
           I E      E   L++L+ + + D+DM D+A  EL      I E EK +Q LLL    PK
Sbjct: 49  IREYEKAVSEAADLEALLADKTTDRDMRDLAEMELPEIETRIGELEKDMQVLLL----PK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASTKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A ISG GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RI
Sbjct: 165 ATISGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY++ER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           ++   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  M+EGE +D  +DA
Sbjct: 284 KVESERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMIEGE-IDELVDA 342

Query: 300 LLLQQEMDAIASFG 313
           L+   +   +A  G
Sbjct: 343 LIADYQAGQLAQLG 356


>gi|407770700|ref|ZP_11118067.1| peptide chain release factor RF-1 [Thalassospira xiamenensis M-5 =
           DSM 17429]
 gi|407286274|gb|EKF11763.1| peptide chain release factor RF-1 [Thalassospira xiamenensis M-5 =
           DSM 17429]
          Length = 360

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 157/299 (52%), Positives = 223/299 (74%), Gaps = 1/299 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           +++G + ++ +   D+DM +MA  E    +D   + +  +   LLPKDDADE++ ILE+R
Sbjct: 58  DLEGAQEILDDAGSDRDMREMAEAEKYEILDALPKAEHDVKLMLLPKDDADEKNAILEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGGEEA+LFA D+++MY+RY++ +GWKFE +   E+DL GYKE    +SG GV+ +LK
Sbjct: 118 AGTGGEEAALFAADLYRMYQRYAENRGWKFEQMDANENDLGGYKEVIVNVSGSGVFARLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVD+ +  +DLRIDTYRS G+GGQH 
Sbjct: 178 FESGVHRVQRVPVTEGGGRIHTSAATVAVLPEAEEVDIHIDPKDLRIDTYRSQGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+  + Q+ +SQH NK KA+K+L ++LY+ ER     +R+  R  Q
Sbjct: 238 NTTDSAVRITHIPTGVVAASQEAKSQHKNKEKAMKMLLSRLYDQERESKDSARAADRKSQ 297

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMME-GENLDIFIDALLLQQEMDAIA 310
           +GSGDRSERIRTYNFPQGRV+DHR+ +T + + D +  G ++D  IDAL+ + +   +A
Sbjct: 298 VGSGDRSERIRTYNFPQGRVSDHRINLTLYRLDDFITGGPSVDEMIDALIAEDQAQKLA 356


>gi|451941480|ref|YP_007462117.1| peptide chain release factor 1 [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451900867|gb|AGF75329.1| peptide chain release factor 1 [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 359

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 163/301 (54%), Positives = 225/301 (74%), Gaps = 2/301 (0%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +H I  L    +EI  L+ LI +   D +M ++A EE+ L   + ++ +  L   LLPKD
Sbjct: 46  VHSIRALNALYREITELEILISDKLTDIEMRNLAQEEIPLLYQKMEQFEQELQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV ++E ++ GYKE  A
Sbjct: 106 VADEKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASHNWKVEVVSLSEGEVGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG GV+ KLKFESG+HRVQR+P TE SGR+HTSA +VA+LP+A+E+D+ +R+EDLRID
Sbjct: 166 TISGKGVFSKLKFESGVHRVQRIPETETSGRIHTSAATVAVLPEAEEIDIEIRSEDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  ++EG +LD  I AL
Sbjct: 285 AESERSASRKNQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRILEG-DLDELIHAL 343

Query: 301 L 301
           +
Sbjct: 344 I 344


>gi|262277608|ref|ZP_06055401.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
 gi|262224711|gb|EEY75170.1| peptide chain release factor 1 [alpha proteobacterium HIMB114]
          Length = 355

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 158/289 (54%), Positives = 218/289 (75%)

Query: 15  DGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG 74
           +G + ++ + S DK++ +MA  EL    ++   L++ +   +LPKD+ADE++ I+E+RAG
Sbjct: 59  EGSEKILEDKSADKELKEMAELELNEIKEKIGDLETKIKIFMLPKDEADEKNAIIEIRAG 118

Query: 75  TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE 134
           TGG EASLFA D+F+MY++ +   GWK E++ +++SD  GYKE   +++G  V+ KLKFE
Sbjct: 119 TGGLEASLFAGDLFEMYQKVASNNGWKTEIISISDSDAGGYKEVVFSVTGKNVFSKLKFE 178

Query: 135 SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT 194
           SG+HRVQRVP TE  GRVHTSA +VA+LP+A++VDV++   +LRID +RS G GGQ  NT
Sbjct: 179 SGVHRVQRVPKTETQGRVHTSAATVAVLPEAEDVDVKIDENELRIDVFRSSGPGGQSVNT 238

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SAVR+THIP+G+ +S QDE+SQH NKAKALK+L +KLYE+ERS++   RS  R  QIG
Sbjct: 239 TDSAVRITHIPSGIVVSQQDEKSQHKNKAKALKILRSKLYELERSKLEKERSSARKSQIG 298

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           SGDRSERIRTYNFPQGRVTDHR+ +T H +SD + G+      DAL +Q
Sbjct: 299 SGDRSERIRTYNFPQGRVTDHRINLTLHKLSDFLSGDVFSEISDALQIQ 347


>gi|424897195|ref|ZP_18320769.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2297]
 gi|393181422|gb|EJC81461.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM2297]
          Length = 359

 Score =  340 bits (872), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKANAELADLETLLDDKSVDREMRDLAELELPEVKEQIEALEHEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|335036125|ref|ZP_08529455.1| peptide chain release factor 1 [Agrobacterium sp. ATCC 31749]
 gi|333792689|gb|EGL64056.1| peptide chain release factor 1 [Agrobacterium sp. ATCC 31749]
          Length = 360

 Score =  340 bits (871), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 231/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQKEID---GLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++ ++R  +K I     L++L+ + + D+DM D+A  EL       + L+  +   LLPK
Sbjct: 45  VVKKIRDYEKAISEAADLEALLADKTTDRDMRDLAEMELPEVETRIRELEKDMQVLLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RI
Sbjct: 165 ATITGRGVFSKLKFESGVHRVQRVPQTEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY++ER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           ++   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE +D  +DA
Sbjct: 284 KVDSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGE-IDELVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LIADYQAGQLAQLGEQQ 359


>gi|121602027|ref|YP_988678.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
 gi|421760486|ref|ZP_16197303.1| peptide chain release factor 1 [Bartonella bacilliformis INS]
 gi|166223530|sp|A1URS5.1|RF1_BARBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120614204|gb|ABM44805.1| peptide chain release factor 1 [Bartonella bacilliformis KC583]
 gi|411175770|gb|EKS45795.1| peptide chain release factor 1 [Bartonella bacilliformis INS]
          Length = 359

 Score =  340 bits (871), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 162/303 (53%), Positives = 226/303 (74%), Gaps = 5/303 (1%)

Query: 2   HLISELRTKQ---KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
            +++ +RT     KE+  L+++      D DM  +A EEL L   + ++L+  +   LLP
Sbjct: 44  QIVTPIRTLNALYKEVTELEAMANTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLP 103

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD ADE+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV +++S++ GYKE 
Sbjct: 104 KDIADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEI 163

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A ISG GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R
Sbjct: 164 IATISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIR 223

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L ++L+++ER
Sbjct: 224 IDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIER 282

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            +    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  I+
Sbjct: 283 QKAESERSASRKTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEG-DLDELIN 341

Query: 299 ALL 301
            L+
Sbjct: 342 PLI 344


>gi|15892685|ref|NP_360399.1| peptide chain release factor 1 [Rickettsia conorii str. Malish 7]
 gi|20139335|sp|Q92HK9.1|RF1_RICCN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|15619858|gb|AAL03300.1| peptide chain release factor RF-1 [Rickettsia conorii str. Malish
           7]
          Length = 355

 Score =  340 bits (871), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 226/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|337266182|ref|YP_004610237.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
 gi|336026492|gb|AEH86143.1| peptide chain release factor 1 [Mesorhizobium opportunistum
           WSM2075]
          Length = 359

 Score =  340 bits (871), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 164/310 (52%), Positives = 228/310 (73%), Gaps = 2/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  LR+ + E   L++++ +   D +M  +A  +L    +  + LQ  +   LLP+D AD
Sbjct: 49  VRALRSAEHEQADLEAMLADKGTDAEMRALAEADLPGVEERIEALQKDIQLLLLPRDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +++ ILE+RAGTGG+EA+LFA D+F+MYERY+ + GW+FE V  ++ D  G+KE  A IS
Sbjct: 109 DKNAILEIRAGTGGDEAALFAGDLFRMYERYAAEHGWRFETVSASDGDAGGFKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+  LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +R ED+RIDT R
Sbjct: 169 GRGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIDIRAEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+AKA+++L A+LY+MERS+   
Sbjct: 229 ASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDMERSKADE 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE LD  IDAL+  
Sbjct: 288 ERSEARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGE-LDEVIDALIAD 346

Query: 304 QEMDAIASFG 313
            +   +A  G
Sbjct: 347 HQSKLLADIG 356


>gi|402703521|ref|ZP_10851500.1| peptide chain release factor 1 [Rickettsia helvetica C9P9]
          Length = 355

 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 226/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLSKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD FI+ L+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFIETLIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|298292694|ref|YP_003694633.1| peptide chain release factor 1 [Starkeya novella DSM 506]
 gi|296929205|gb|ADH90014.1| peptide chain release factor 1 [Starkeya novella DSM 506]
          Length = 365

 Score =  339 bits (870), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 157/297 (52%), Positives = 217/297 (73%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  LR+ ++++   ++L  E + DK+M  +A EE+    ++ + L   +  +LLPKD  D
Sbjct: 49  VKALRSAERQLTDARTLAAEAAGDKEMAALAEEEVASLEEQVETLTHAVRLALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILEVRAGTGG+EA+LFA D+F+MYER++   GW  EV+ +TE    G+KE  AA+ 
Sbjct: 109 ERGVILEVRAGTGGDEAALFAGDLFRMYERFAGLNGWSVEVLSLTEGTAGGFKEIVAALH 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ ++VD+ +   DLRID +R
Sbjct: 169 GSGAYAKLKFESGVHRVQRVPETEGSGRIHTSAATVAVLPEVEDVDIAINESDLRIDVFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+TH+PTG  +++QDERSQH NKA+A+ +L A++YE ER +   
Sbjct: 229 ASGAGGQHVNKTESAVRITHLPTGTVVAVQDERSQHKNKARAMGMLRARIYEAEREKRDS 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H + +++ GE L   +DAL
Sbjct: 289 ARASERKVQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHKLPEILSGEGLGELVDAL 345


>gi|390452279|ref|ZP_10237826.1| peptide chain release factor 1 [Nitratireductor aquibiodomus RA22]
 gi|389659935|gb|EIM71674.1| peptide chain release factor 1 [Nitratireductor aquibiodomus RA22]
          Length = 359

 Score =  339 bits (870), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 162/314 (51%), Positives = 239/314 (76%), Gaps = 8/314 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I ELR  + E+D LKS++ + + DK+M ++A  ++      E R+++L   +   LLPKD
Sbjct: 49  IRELRQAEAELDDLKSMLADPATDKEMRELAEADVEGV---EGRIETLGEEMQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +AD+++ ILE+RAGTGG+EA+LFA D+F+MYERY+ +KGW+ EVV V+E +  GYKE  A
Sbjct: 106 EADDKNAILEIRAGTGGDEAALFAGDLFRMYERYAAEKGWRVEVVSVSEGEAGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++DV ++ +D+RID
Sbjct: 166 TVSGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDIDVDIKPDDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+L++M+R +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIVV-LQAEKSQHQNRARAMQILRARLFDMQRMK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               RS+ R  Q+G+GDRSERIRTYNFPQGR+TDHR+ +T + +  ++EG +LD  IDAL
Sbjct: 285 AADERSEARRLQVGTGDRSERIRTYNFPQGRLTDHRINLTLYKLDRVIEG-DLDEVIDAL 343

Query: 301 LLQQEMDAIASFGS 314
           +   +   +A  G+
Sbjct: 344 ISDHQAKLLAETGA 357


>gi|229586782|ref|YP_002845283.1| peptide chain release factor 1 [Rickettsia africae ESF-5]
 gi|259585242|sp|C3PNN0.1|RF1_RICAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|228021832|gb|ACP53540.1| Peptide chain release factor RF-1 [Rickettsia africae ESF-5]
          Length = 355

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 159/302 (52%), Positives = 227/302 (75%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSG+RSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGNRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|241206502|ref|YP_002977598.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860392|gb|ACS58059.1| peptide chain release factor 1 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 359

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/317 (51%), Positives = 233/317 (73%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M ++A  EL    ++ + L+  +   LLPK
Sbjct: 45  VVTKIRVYEKAVAELADLETLLEDRSVDREMRELAELELPEVKEQIEVLEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|418940341|ref|ZP_13493709.1| Peptide chain release factor 1 [Rhizobium sp. PDO1-076]
 gi|375052961|gb|EHS49360.1| Peptide chain release factor 1 [Rhizobium sp. PDO1-076]
          Length = 359

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/315 (52%), Positives = 229/315 (72%), Gaps = 8/315 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I E +    E   L+S++ +   D++M D+A  EL    D + RL++L   +   LLPKD
Sbjct: 49  IREYQAATAEEADLRSMLSDKGTDREMRDLAEMELP---DVQARLETLGTEMQILLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADE+  ILE+RAGTGG EA+LFA D+F+MYER++  KGWK EV+  +E D  G+KE  A
Sbjct: 106 AADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASTKGWKVEVLSSSEGDAGGFKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ++G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +R ED+RID
Sbjct: 166 TVTGRGVFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEDIDIEVRAEDIRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+MER +
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           I   RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEG ++D  +DAL
Sbjct: 285 IDNERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEG-DIDEVVDAL 343

Query: 301 LLQQEMDAIASFGST 315
           +   +   +A  G +
Sbjct: 344 INDYQAGQLAQLGES 358


>gi|405382555|ref|ZP_11036336.1| peptide chain release factor 1 [Rhizobium sp. CF142]
 gi|397320961|gb|EJJ25388.1| peptide chain release factor 1 [Rhizobium sp. CF142]
          Length = 359

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 167/317 (52%), Positives = 230/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  QK   E+  L++L+ + S D+DM ++A  EL    +  + L++ +   LLPK
Sbjct: 45  VVTKIRAYQKAVGELADLEALLEDKSVDRDMRELAELELPDVKERIEALENEIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+   GWK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGNEAALFAGDLFRMYERYASTHGWKVEVLSSSEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +R ED+RI
Sbjct: 165 ATITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MM GE +D  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMIGE-IDEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           LL   +   +A  G  Q
Sbjct: 343 LLADYQASQLAQLGEQQ 359


>gi|304394129|ref|ZP_07376052.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
 gi|303293569|gb|EFL87946.1| peptide chain release factor 1 [Ahrensia sp. R2A130]
          Length = 358

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 163/314 (51%), Positives = 228/314 (72%), Gaps = 9/314 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMA---TEELCLAIDE-EKRLQSLLLKSLLPK 59
           I E++  Q E   L  ++ +   D +M +MA    E L  AI+E E  LQ LLL    P+
Sbjct: 47  IGEMQAAQSEFADLAGMLADGDTDAEMKEMAQAEMEPLKAAIEEHEAELQILLL----PR 102

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+AD ++ ILE+RAGTGG EA+LFA D+F+MY+R+++  GWK +V+  +  ++ GYKE  
Sbjct: 103 DEADAKNAILEIRAGTGGSEAALFAGDLFRMYQRHAETSGWKVDVLSESAGEVGGYKEII 162

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A+I+G GV+ +LKFESG+HRVQRVP TE  GRVHTSA +VA+LP+A++VD+ +RNED+RI
Sbjct: 163 ASINGTGVFARLKFESGVHRVQRVPETESGGRVHTSAATVAVLPEAEDVDIEIRNEDIRI 222

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+THIPTG+ + +  E+SQH N+A A+K L  +LY+MER 
Sbjct: 223 DTMRASGAGGQHVNTTDSAVRITHIPTGVVV-LSTEKSQHQNRANAMKELRTRLYDMERQ 281

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           ++   R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + +  M+ GE LD  +DA
Sbjct: 282 KVDQERADSRKGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKLDKMIAGEGLDEMLDA 341

Query: 300 LLLQQEMDAIASFG 313
           L+   + + +AS G
Sbjct: 342 LITDHQANLLASLG 355


>gi|338708566|ref|YP_004662767.1| peptide chain release factor 1 [Zymomonas mobilis subsp. pomaceae
           ATCC 29192]
 gi|336295370|gb|AEI38477.1| peptide chain release factor 1 [Zymomonas mobilis subsp. pomaceae
           ATCC 29192]
          Length = 358

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/312 (53%), Positives = 227/312 (72%), Gaps = 11/312 (3%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELC---LAIDEEKRLQSLLLKSLLPKD 60
           +S LR   +E + L+S+  +  ED ++  MA EEL     A+ + +R  +L   SLLP+D
Sbjct: 53  VSALR---EETEMLESMTRD--EDPELQAMAVEELSDKKQALSDAERALAL---SLLPRD 104

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADER  ILE+RAGTGG+EA+LF  D+ +MY RY++  GW+ E++  + ++L GYKE   
Sbjct: 105 AADERSAILEIRAGTGGDEAALFGGDLLRMYSRYAEDHGWRVELISASAAELGGYKEVVI 164

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           +I+G GV+ +LKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVDV +   DLRID
Sbjct: 165 SITGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVAIDERDLRID 224

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            +RS G GGQ  NTT+SAVR+THIP+G+ +S QDE+SQH NKAKA+KVL A+LYE ER R
Sbjct: 225 IFRSSGPGGQSVNTTDSAVRITHIPSGIVVSQQDEKSQHKNKAKAMKVLRARLYERERER 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +H  R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++ G  L+  I AL
Sbjct: 285 LHSERAGQRKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILAGPALEEVIAAL 344

Query: 301 LLQQEMDAIASF 312
           + + E + +AS 
Sbjct: 345 ISEDEAERLASL 356


>gi|75674575|ref|YP_316996.1| peptide chain release factor 1 [Nitrobacter winogradskyi Nb-255]
 gi|119361570|sp|Q3SVP7.1|RF1_NITWN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|74419445|gb|ABA03644.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           winogradskyi Nb-255]
          Length = 358

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 160/311 (51%), Positives = 224/311 (72%), Gaps = 2/311 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +   R    EI G+ ++I + + D +M  MA  E   L    ++ +Q + + +LLPKD  
Sbjct: 47  VKNWRAVTAEIAGIDAMIADPATDAEMRAMAEAERPALEARNDELMQKIRV-ALLPKDAM 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER+ +LEVRAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A +
Sbjct: 106 DERNVMLEVRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQV 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y ++KFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVDV +R +DLRI+T 
Sbjct: 166 QGRGAYARMKFESGVHRVQRVPDTEAQGRVHTSAATVAVLPEAEEVDVDIRPDDLRIETM 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SA+R+THIPTG+ +S+QD RSQH N+A A+ +L +++Y+ ER RI+
Sbjct: 226 RAQGAGGQHVNKTESAIRITHIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQRIN 285

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +RS  R +Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ G+ L   IDAL  
Sbjct: 286 AARSADRKDQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTT 345

Query: 303 QQEMDAIASFG 313
           + +   +A+ G
Sbjct: 346 EHQAAQLAAEG 356


>gi|227823188|ref|YP_002827160.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
 gi|227342189|gb|ACP26407.1| peptide chain release factor 1 [Sinorhizobium fredii NGR234]
          Length = 352

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  ++ L+ + + DK+M D+A  E     +  + L+  +   LLPK
Sbjct: 37  VVTKIRAYEKATAELADIEVLLSDRATDKEMRDLAEMERPEVEERIEALEEEIQILLLPK 96

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+  KGW+ EV+  +E +  GYKE  
Sbjct: 97  DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAAKGWRVEVLSASEGEAGGYKEII 156

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 157 ATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 216

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++L++MER 
Sbjct: 217 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLFDMERQ 275

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  MMEGE +D  +DA
Sbjct: 276 RADSERSADRKSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-IDEVVDA 334

Query: 300 LLLQQEMDAIASFGSTQ 316
           LL   +   +A  G  Q
Sbjct: 335 LLADHQASQLALLGERQ 351


>gi|110635328|ref|YP_675536.1| peptide chain release factor 1 [Chelativorans sp. BNC1]
 gi|119361558|sp|Q11E04.1|RF1_MESSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110286312|gb|ABG64371.1| bacterial peptide chain release factor 1 (bRF-1) [Chelativorans sp.
           BNC1]
          Length = 359

 Score =  338 bits (868), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 163/315 (51%), Positives = 240/315 (76%), Gaps = 10/315 (3%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAI-DEEKRLQSLLLKSLLPK 59
           I  LR  + E++ L +++ + S D+++ ++A    EE+   + D +++LQ LLL    PK
Sbjct: 49  IRALRKAEAELEDLDTMLADKSIDREIRELAEIDREEVESRVEDMQQKLQVLLL----PK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+ADE++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+ EVV  +E +  GYKE  
Sbjct: 105 DEADEKNAILEIRAGTGGDEAALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A+++G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++DV ++ ED+RI
Sbjct: 165 ASVTGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDIDVDIKPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+TH+PTG+ + +  E+SQH N+A+A+++L A+L++MERS
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDMERS 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS+ R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + +  +MEGE LD  IDA
Sbjct: 284 RAANERSEARRLQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDEVIDA 342

Query: 300 LLLQQEMDAIASFGS 314
           L+   +   +A+ G+
Sbjct: 343 LIADHQSKLLAAEGA 357


>gi|397677429|ref|YP_006518967.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 29191]
 gi|395398118|gb|AFN57445.1| Peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 29191]
          Length = 358

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/287 (55%), Positives = 211/287 (73%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D ++  MA EEL          +  L  SLLP+D ADER  ILE+RAGTGG+EA+LF  
Sbjct: 70  DDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAGTGGDEAALFGG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY+++ GW+ E++  + ++L GYKE   +I+G GV+ +LKFESG+HRVQRVP+
Sbjct: 130 DLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFESGVHRVQRVPV 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA +VA+LP+A+EVDV +   DLRID +RS G GGQ  NTT+SAVR+THIP
Sbjct: 190 TESGGRIHTSAATVAVLPEAEEVDVDIDERDLRIDIFRSSGPGGQSVNTTDSAVRITHIP 249

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           +G+ +S QDE+SQH NKAKA+KVL A+LYE ER R+H  R+  R   +GSGDRSERIRTY
Sbjct: 250 SGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERLHSERAGQRKSMVGSGDRSERIRTY 309

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           NFPQGRVTDHR+ +T H + +++ G  LD  I AL+ + E + +AS 
Sbjct: 310 NFPQGRVTDHRINLTLHRLPEILAGPGLDEVISALIAEDEAERLASL 356


>gi|328542097|ref|YP_004302206.1| peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1]
 gi|326411847|gb|ADZ68910.1| Peptide chain release factor 1 [Polymorphum gilvum SL003B-26A1]
          Length = 357

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 151/256 (58%), Positives = 204/256 (79%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD AD  D ILEVRAGTGG+EA+LFA D+F+MY+RY+  KGWK E++  +E ++ G+
Sbjct: 99  LLPKDSADTNDAILEVRAGTGGDEAALFAGDLFRMYQRYADLKGWKVEILSASEGEMGGF 158

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A++SG  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA++VD+ + + 
Sbjct: 159 KEVIASVSGENVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPQAEDVDIDVHDS 218

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRIDTYR+ G+GGQH NTT+SAVR+TH+PTG+ +++QDERSQH NKAKA+++L AK+Y+
Sbjct: 219 DLRIDTYRASGAGGQHVNTTDSAVRITHLPTGIVVAVQDERSQHKNKAKAMQLLRAKIYD 278

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            ER +    R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T + +  ++ GE LD 
Sbjct: 279 AEREKAASERTEARRLQVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLDQVISGEALDE 338

Query: 296 FIDALLLQQEMDAIAS 311
            IDAL +  +   +A+
Sbjct: 339 VIDALTMDHQASLLAA 354


>gi|56552405|ref|YP_163244.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|260753918|ref|YP_003226811.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|384412513|ref|YP_005621878.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
 gi|81598182|sp|Q5NMC7.1|RF1_ZYMMO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56543979|gb|AAV90133.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ZM4]
 gi|258553281|gb|ACV76227.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|335932887|gb|AEH63427.1| peptide chain release factor 1 [Zymomonas mobilis subsp. mobilis
           ATCC 10988]
          Length = 358

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 158/287 (55%), Positives = 211/287 (73%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D ++  MA EEL          +  L  SLLP+D ADER  ILE+RAGTGG+EA+LF  
Sbjct: 70  DDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAGTGGDEAALFGG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY+++ GW+ E++  + ++L GYKE   +I+G GV+ +LKFESG+HRVQRVP+
Sbjct: 130 DLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFESGVHRVQRVPV 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA +VA+LP+A+EVDV +   DLRID +RS G GGQ  NTT+SAVR+THIP
Sbjct: 190 TESGGRIHTSAATVAVLPEAEEVDVDIDERDLRIDIFRSSGPGGQSVNTTDSAVRITHIP 249

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           +G+ +S QDE+SQH NKAKA+KVL A+LYE ER R+H  R+  R   +GSGDRSERIRTY
Sbjct: 250 SGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERLHSERAGQRKSMVGSGDRSERIRTY 309

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           NFPQGRVTDHR+ +T H + +++ G  LD  I AL+ + E + +AS 
Sbjct: 310 NFPQGRVTDHRINLTLHRLPEILAGPGLDEVISALIAEDEAERLASL 356


>gi|395784696|ref|ZP_10464518.1| peptide chain release factor 1 [Bartonella melophagi K-2C]
 gi|395421956|gb|EJF88178.1| peptide chain release factor 1 [Bartonella melophagi K-2C]
          Length = 359

 Score =  338 bits (867), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 161/298 (54%), Positives = 223/298 (74%), Gaps = 2/298 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L    KEI+ LK++I +   D +M ++A EEL L   + ++L+  L   LLPKD AD
Sbjct: 49  IRTLNALYKEIEELKNIISDKQTDVEMRNLAQEELLLLCQKIEQLERELQILLLPKDIAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK E++ +++ D+ GYKE  A +S
Sbjct: 109 EKSAIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVATVS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +  ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETEAGGRIHTSAATVAVLPEAEEIDIAIHPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+ +AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQKAEN 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            RS+ R  QIGSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  I AL+
Sbjct: 288 ERSESRKTQIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELIHALI 344


>gi|150397700|ref|YP_001328167.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
 gi|166223607|sp|A6UCF2.1|RF1_SINMW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|150029215|gb|ABR61332.1| peptide chain release factor 1 [Sinorhizobium medicae WSM419]
          Length = 360

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 167/323 (51%), Positives = 235/323 (72%), Gaps = 17/323 (5%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMA------TEELCLAIDEEKRLQSLLL 53
           ++S++R  +K   E+  + +++ + + DKDM D+A       EE   A+++E  +Q LLL
Sbjct: 45  VVSKIRAYEKATAELADIGAMLADRATDKDMRDLAELEKPEIEERVEALEQE--IQILLL 102

Query: 54  KSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLR 113
               PKD ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+  KGW+ EV+  +E +  
Sbjct: 103 ----PKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAGKGWRVEVLSASEGEAG 158

Query: 114 GYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLR 173
           GYKE  A +SG GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +R
Sbjct: 159 GYKEIIATVSGRGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIDIR 218

Query: 174 NEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKL 233
           +ED+R+DT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++L
Sbjct: 219 SEDIRVDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHQNRAKAMQVLRSRL 277

Query: 234 YEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL 293
           Y+MER R    RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +MEGE +
Sbjct: 278 YDMERQRADSERSADRRNQVGSGDRSERIRTYNFPQGRLTDHRINLTIYKLDRVMEGE-I 336

Query: 294 DIFIDALLLQQEMDAIASFGSTQ 316
           D  +DALL   +   +A  G  Q
Sbjct: 337 DEIVDALLADYQASQLALLGEKQ 359


>gi|319408172|emb|CBI81825.1| peptide chain release factor 1 [Bartonella schoenbuchensis R1]
          Length = 359

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 165/310 (53%), Positives = 227/310 (73%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L    KEI+ LK++I +   D +M ++A EEL L   + ++L+  L   LLPKD AD
Sbjct: 49  IRTLNALYKEIEELKNIISDKQTDVEMRNLAQEELSLLCQKIEQLERELQILLLPKDIAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK E++ +++ D+ GYKE  A +S
Sbjct: 109 EKSAIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEIISLSDGDVGGYKEIVATVS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +  ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETEAGGRIHTSAATVAVLPEAEEIDIAIHPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+ +AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQKAEN 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS+ R  QIGSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  I AL+  
Sbjct: 288 ERSESRKTQIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELIHALISN 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTGLLTEMD 356


>gi|319781345|ref|YP_004140821.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167233|gb|ADV10771.1| peptide chain release factor 1 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 359

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 226/310 (72%), Gaps = 2/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  LR  + E   L++++ +   D +M  +A  EL    D  + LQ  +   LLP+D AD
Sbjct: 49  VRALRAAEHEQADLEAMLADRGTDAEMRALAEAELPGVEDRIEALQKDIQILLLPRDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+FE    ++ D  GYKE  A +S
Sbjct: 109 DKNAILEIRAGTGGDEAALFAGDLFRMYERYAAERGWRFETASASDGDAGGYKEIIATVS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+  LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +R ED+RIDT R
Sbjct: 169 GKGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIDIRAEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+AKA+++L A+LY++ER +   
Sbjct: 229 ASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERGKADE 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE LD  I+AL+  
Sbjct: 288 ERSESRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGE-LDEIINALIAD 346

Query: 304 QEMDAIASFG 313
            +   +A  G
Sbjct: 347 HQSKLLADIG 356


>gi|217977729|ref|YP_002361876.1| peptide chain release factor 1 [Methylocella silvestris BL2]
 gi|254790890|sp|B8EI32.1|RF1_METSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217503105|gb|ACK50514.1| peptide chain release factor 1 [Methylocella silvestris BL2]
          Length = 360

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 160/300 (53%), Positives = 221/300 (73%), Gaps = 6/300 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I + R++ +E++GL +++ + + D +M  +A EEL    D ++RL++L   L  +LLPKD
Sbjct: 47  IRDYRSQMQEVEGLAAMLADPTTDSEMRGLAEEELR---DAKERLEALEHQLKIALLPKD 103

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            ADER  ILEVRAGTGG+EA+LFA D+F+MY+RY++ KGW  E++   E    G+KE  A
Sbjct: 104 AADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIA 163

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I+G GV+ KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+A EVDV +   DL+ID
Sbjct: 164 EIAGRGVFAKLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAQEVDVEINEADLKID 223

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH N T SA+R+THIPTG  + +QDERSQH N+A+A+ +L +++Y+ +R +
Sbjct: 224 TMRAQGAGGQHVNKTESAIRITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQK 283

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +   R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE LD  IDAL
Sbjct: 284 LDAERAADRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKVITGEALDEVIDAL 343


>gi|85713812|ref|ZP_01044802.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
 gi|85699716|gb|EAQ37583.1| Peptide chain release factor 1 [Nitrobacter sp. Nb-311A]
          Length = 358

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 157/308 (50%), Positives = 220/308 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           + + R    EI G+ ++I + + D +M  MA  E          L   +  +LLPKD  D
Sbjct: 47  VKDWRAITAEIAGIDAMIADPATDAEMRAMAEAERPALEARNNELMQQIRIALLPKDAMD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LEVRAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 107 ERNVMLEVRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAEVQ 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y K+KFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVDV ++ +DLRI+T R
Sbjct: 167 GRGAYAKMKFESGVHRVQRVPDTEAQGRVHTSAATVAVLPEAEEVDVEIKPDDLRIETMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ +++QD RSQH N+A A+ +L +++Y++ER RI+ 
Sbjct: 227 AQGAGGQHVNKTESAIRITHIPTGIVVNMQDSRSQHKNRASAMNILRSRIYDVERQRINA 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +RS  R +Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ G+ L   IDAL  +
Sbjct: 287 ARSADRKDQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTE 346

Query: 304 QEMDAIAS 311
            +   +A+
Sbjct: 347 HQAAQLAA 354


>gi|399037191|ref|ZP_10734070.1| peptide chain release factor 1 [Rhizobium sp. CF122]
 gi|398065183|gb|EJL56834.1| peptide chain release factor 1 [Rhizobium sp. CF122]
          Length = 359

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 165/317 (52%), Positives = 229/317 (72%), Gaps = 5/317 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L++L+ + S D++M D+A  EL    +  + L+  +   LLPK
Sbjct: 45  VVTKIRVYEKAIAELADLETLLNDKSVDREMRDLAELELPEVKERLEALEQEIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+   GWK EV+  +E +  G+KE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAAHGWKVEVLSSSEGEAGGFKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MM GE +D  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMVGE-IDEVVDA 342

Query: 300 LLLQQEMDAIASFGSTQ 316
           L+   +   +A  G  Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359


>gi|319407578|emb|CBI81228.1| peptide chain release factor 1 [Bartonella sp. 1-1C]
          Length = 359

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 229/310 (73%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L + +KEI  L+++I +   D +M ++A EEL     + + L+  L   LLPKD AD
Sbjct: 49  IRTLNSLRKEIAELETIISDIQTDTEMRNLAQEELSSLSQKIQELEKELQILLLPKDIAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA ++F+MYERY+    WK E++ +++ ++ GYKE  A IS
Sbjct: 109 EKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R+ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRSEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +L+  I+AL+  
Sbjct: 288 ERSASRKTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEG-DLNELINALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTTLLTEMD 356


>gi|190893591|ref|YP_001980133.1| peptide chain release factor 1 [Rhizobium etli CIAT 652]
 gi|190698870|gb|ACE92955.1| peptide chain release factor 1 protein [Rhizobium etli CIAT 652]
          Length = 351

 Score =  337 bits (864), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 163/314 (51%), Positives = 230/314 (73%), Gaps = 5/314 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L +L+ + + D++M D+A  EL    +  + L+  +   LLPK
Sbjct: 37  VVTKIRAYEKAVAELADLDTLLEDKAVDREMRDLAELELPEVKERIEALEQEMQILLLPK 96

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GYKE  
Sbjct: 97  DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 156

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 157 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 216

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 217 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 275

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 276 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 334

Query: 300 LLLQQEMDAIASFG 313
           L+   +   +A  G
Sbjct: 335 LMADYQASQLAQLG 348


>gi|85709577|ref|ZP_01040642.1| protein chain release factor A [Erythrobacter sp. NAP1]
 gi|85688287|gb|EAQ28291.1| protein chain release factor A [Erythrobacter sp. NAP1]
          Length = 355

 Score =  337 bits (864), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 160/313 (51%), Positives = 231/313 (73%), Gaps = 10/313 (3%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCL---AIDEEKRLQSLLLKSLLPK 59
           +  E++  ++EI+GL+ ++     D +M  MA EEL     A+ E++R  SL + +LLP+
Sbjct: 48  IAGEVKAMREEIEGLEEMLA----DPEMKAMAEEELSAIREALPEKER--SLAI-ALLPR 100

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D AD +  +LE+RAGTGG+EA+LFA D+F+MYE+Y+ ++GW+ E V ++ S++ G+KE  
Sbjct: 101 DRADAKPAMLEIRAGTGGDEAALFAGDLFRMYEKYAAEQGWRVEPVSMSASEVGGFKEIV 160

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ DEVDV++   DL+I
Sbjct: 161 ANVSGQGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVQIDPGDLKI 220

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DTYR+ G+GGQH NTT+SA+R+TH PTG+ ++ QD RSQH N+ KA++VL A+LYE  R 
Sbjct: 221 DTYRASGAGGQHVNTTDSAIRITHEPTGLVVTCQDGRSQHKNREKAMQVLRARLYEKTRD 280

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
               + ++ R   +GSGDRSERIRTYNFPQGRVTDHR+G+T H + +++ G  LD  +DA
Sbjct: 281 EAQGAEAEARKAMVGSGDRSERIRTYNFPQGRVTDHRIGLTLHKLEEVLAGPGLDELVDA 340

Query: 300 LLLQQEMDAIASF 312
           L+ + E   +A+ 
Sbjct: 341 LIAEDEGKRLAAL 353


>gi|88657945|ref|YP_507408.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
 gi|119361539|sp|Q2GGM5.1|RF1_EHRCR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88599402|gb|ABD44871.1| peptide chain release factor 1 [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 359

 Score =  337 bits (864), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 159/312 (50%), Positives = 224/312 (71%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + +I +    QK+I GL+ LI     D ++  +A EE      +  +++  L  SLLPKD
Sbjct: 46  ISVIDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R+ ILE+RAGTGGEEA+LF  D+++MY +Y+++K WKFE +  + + + G+KE S 
Sbjct: 106 KDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISL 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 CISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIP+G+ +  QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                S++R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+  NLD FI+AL
Sbjct: 286 RDAEISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEAL 345

Query: 301 LLQQEMDAIASF 312
           + + E + + + 
Sbjct: 346 IAEDEANKLKNL 357


>gi|402771362|ref|YP_006590899.1| peptide chain release factor 1 (RF-1) [Methylocystis sp. SC2]
 gi|401773382|emb|CCJ06248.1| Peptide chain release factor 1 (RF-1) [Methylocystis sp. SC2]
          Length = 356

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 164/297 (55%), Positives = 219/297 (73%), Gaps = 1/297 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  QKE D L +++ + S D +M  +A  E   A +     +S L  +LLPKD+AD
Sbjct: 47  IRAYRAAQKESDDLSAMLADASLDAEMRRLAESETEAAHERLAAAESALKLALLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+ Y++Y+  KGW+ E+V  +E  L G+KE  A I 
Sbjct: 107 EKGVILEVRAGTGGDEAALFAGDLFRAYQKYAALKGWRVEIVSGSEGALGGFKEIVAEII 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GVYG+LKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA++VDV +  +DL+IDT R
Sbjct: 167 GRGVYGRLKFESGVHRVQRVPETETQGRIHTSAATVAVLPQAEDVDVDIDEKDLQIDTMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIP+G+ + +Q+ERSQH N+AKA+ VL ++LY+ ER R+  
Sbjct: 227 AQGAGGQHVNKTESAIRITHIPSGIVVMMQEERSQHRNRAKAMNVLRSRLYDAERQRLDK 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            RS+ R +Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEGE  D  IDAL
Sbjct: 287 ERSEDRKQQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-FDEIIDAL 342


>gi|357029044|ref|ZP_09091057.1| peptide chain release factor 1 [Mesorhizobium amorphae CCNWGS0123]
 gi|355536567|gb|EHH05837.1| peptide chain release factor 1 [Mesorhizobium amorphae CCNWGS0123]
          Length = 359

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 161/310 (51%), Positives = 226/310 (72%), Gaps = 2/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  LR  + E   L++++ +   D +M  +A  +L    +  + LQ  +   LLPKD AD
Sbjct: 49  IRALRAAEHEQADLEAMLADKGTDAEMRALAEADLPEVKERIEALQKDIQILLLPKDAAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E++ ILE+RAGTGG+EA+LFA D+F+MYERY+  +GW+FEV   ++ ++ GYKE  A +S
Sbjct: 109 EKNAILEIRAGTGGDEAALFAGDLFRMYERYAASRGWRFEVASASDGEVGGYKEIIATVS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+  LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +R ED+RIDT R
Sbjct: 169 GKGVFAHLKFESGVHRVQRVPATEAGGRIHTSAATVAVLPEAEEVDIEIRAEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+A+A+++L A+LY++ER +   
Sbjct: 229 ASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRARAMQILRARLYDLERGKADE 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS+ R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M GE LD  IDAL+  
Sbjct: 288 ERSESRKSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLERVMMGE-LDEVIDALIAD 346

Query: 304 QEMDAIASFG 313
            +   +A  G
Sbjct: 347 HQSKLLADMG 356


>gi|395791488|ref|ZP_10470946.1| peptide chain release factor 1 [Bartonella alsatica IBS 382]
 gi|395408851|gb|EJF75461.1| peptide chain release factor 1 [Bartonella alsatica IBS 382]
          Length = 359

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 163/301 (54%), Positives = 224/301 (74%), Gaps = 8/301 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           EI  L+++I +   D +M D+A EEL L   + ++ +  L   LLPKD ADE+  I+E+R
Sbjct: 58  EIAELETIINDKLTDIEMRDLAQEELPLLNQKIEQFEQKLQILLLPKDIADEKSAIVEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MY RY+    WK E+V + E ++ GYKE  A+ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYARYADAHNWKVEIVSLNEGEVGGYKEIIASISGKGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQR+P TE SGR+HTSA +VA+LP+A+E+D+++R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRIPETETSGRIHTSAATVAVLPEAEEIDIKIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+ + +Q E+SQH N+ +AL++L A+L+++ER +    RS  R  Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQKAENERSTSRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL------LQQEM 306
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD FI AL+      L  EM
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDEFIHALISNHQTALLMEM 355

Query: 307 D 307
           D
Sbjct: 356 D 356


>gi|163759877|ref|ZP_02166961.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
 gi|162282835|gb|EDQ33122.1| peptide chain release factor 1 [Hoeflea phototrophica DFL-43]
          Length = 361

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 160/297 (53%), Positives = 220/297 (74%), Gaps = 2/297 (0%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           L++++ + + DK+M D+A  EL         L+  +   LLPKD ADER  ILE+RAGTG
Sbjct: 62  LEAMLQDTANDKEMRDLAESELRSTKVRIGELEEQIEIMLLPKDAADERSAILEIRAGTG 121

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G EA+LFA D+F+MYERY+  + WK EV+  +E +  GYKE  A ISG GV+ +LKFESG
Sbjct: 122 GSEAALFAGDLFRMYERYASSRKWKVEVLSASEGEAGGYKEIIATISGKGVFARLKFESG 181

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
           +HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +R+ED+RIDT R+ G+GGQH NTT+
Sbjct: 182 VHRVQRVPETESGGRIHTSAATVAVLPEAEDIDIEVRSEDIRIDTMRASGAGGQHVNTTD 241

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVR+TH+PTG+ ++   E+SQH N+A+A++VL A+LY+MER R    RS+ R  Q+GSG
Sbjct: 242 SAVRITHLPTGLVVT-SSEKSQHQNRARAMQVLRARLYDMERQRADDERSQSRRSQVGSG 300

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           DRSERIRTYNFPQGRVTDHR+ +T + +  MM GE +D  +DAL+   +   +A+ G
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLYKLDRMMMGE-IDEVVDALISDHQAGQLATLG 356


>gi|297180646|gb|ADI16856.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_13E22]
          Length = 359

 Score =  337 bits (863), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 165/323 (51%), Positives = 232/323 (71%), Gaps = 16/323 (4%)

Query: 4   ISELRTKQKEIDGLKSL----------IYECSEDKDMLDMA---TEELCLAIDEEKRLQS 50
           +SELR   ++ID ++ L            E ++D +M +MA    +E+   + EE     
Sbjct: 39  LSELRPVCEQIDLVRRLEGDRDAAVMLAEEAADDAEMAEMAQAEIQEIEARLPEEMNSLQ 98

Query: 51  LLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTES 110
           LLL   LP+D  D R+ ILEVRAGTGG+EA+LFA D+F MY+R++ K GW+FEV+ V+E+
Sbjct: 99  LLL---LPRDRDDSRNAILEVRAGTGGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSET 155

Query: 111 DLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV 170
            + GYKEA+A I+G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+
Sbjct: 156 GIGGYKEATANIAGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDVDI 215

Query: 171 RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLC 230
            +++ DLRID +R+ G GGQ  NTT+SAVR+THIPTG+ +S QDE+SQH N+AKA+K+L 
Sbjct: 216 DVQDSDLRIDVFRASGPGGQSVNTTDSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILR 275

Query: 231 AKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEG 290
           A+LY+ ER+R+   R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ G
Sbjct: 276 ARLYDAERARLQAERAASRKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKVIAG 335

Query: 291 ENLDIFIDALLLQQEMDAIASFG 313
           E LD  ++AL+ +     +A  G
Sbjct: 336 EALDEVVEALVAEDRAQRLAEGG 358


>gi|156389000|ref|XP_001634780.1| predicted protein [Nematostella vectensis]
 gi|156221867|gb|EDO42717.1| predicted protein [Nematostella vectensis]
          Length = 273

 Score =  336 bits (862), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 155/259 (59%), Positives = 205/259 (79%), Gaps = 1/259 (0%)

Query: 52  LLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESD 111
           ++K+L+PKD+ADE D ILEVRAGTGG+EASLFA ++F MY+R++  K WKF+++ +  SD
Sbjct: 1   IMKALIPKDEADENDAILEVRAGTGGQEASLFASEMFIMYQRFAAFKKWKFDILDIARSD 60

Query: 112 LRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR 171
             GYKEASA+ISG GV+GK+KFE G+HRVQRVP+TE  GRVHTS ++VA+LPQ  EVDV 
Sbjct: 61  TGGYKEASASISGYGVFGKMKFEVGVHRVQRVPVTEAQGRVHTSTMTVAVLPQPQEVDVI 120

Query: 172 LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCA 231
           +   DL+IDT+R+ G+GGQH NTT+SAVR+THIP+GM +S Q+ERSQ  NKAKA++VL A
Sbjct: 121 ISPNDLKIDTFRASGAGGQHVNTTDSAVRITHIPSGMVVSSQEERSQFKNKAKAMQVLRA 180

Query: 232 KLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGE 291
           +LY+++R     +R   R  QIG+ +RSE+IRTYNFPQGRVTDHR+G+T H +   +EG 
Sbjct: 181 RLYDLQRQEADSARVHARRTQIGTAERSEKIRTYNFPQGRVTDHRIGMTSHTVDKFLEGG 240

Query: 292 N-LDIFIDALLLQQEMDAI 309
             L+  IDAL +Q E DA+
Sbjct: 241 VLLEDMIDALRVQDERDAL 259


>gi|359409095|ref|ZP_09201563.1| peptide chain release factor 1 [SAR116 cluster alpha
           proteobacterium HIMB100]
 gi|356675848|gb|EHI48201.1| peptide chain release factor 1 [SAR116 cluster alpha
           proteobacterium HIMB100]
          Length = 360

 Score =  336 bits (862), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 161/297 (54%), Positives = 221/297 (74%), Gaps = 7/297 (2%)

Query: 7   LRTKQKEIDGLKSLIYECSEDKDMLDMA---TEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +R  Q+ +   + LI E + D ++++MA   TEEL   + E +    LLL   LPKD  D
Sbjct: 52  VRQLQQNLTEARQLIEEET-DPELVEMAQAETEELAAQLPEAEHQLKLLL---LPKDTDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R+ ILEVRAGTGG+EA+LFA D+F MY+R++ K GW+F+V+ V+E+ + GYKEA+A IS
Sbjct: 108 ARNAILEVRAGTGGDEAALFASDLFGMYQRFAAKYGWRFDVMEVSETGIGGYKEATANIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A +VD+ +   DLR+D +R
Sbjct: 168 GQDVFARLKFESGVHRVQRVPETETGGRIHTSAATVAVLPEAQDVDIEINESDLRVDVFR 227

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQH N+AKA+K+L A+LY+ ER+R   
Sbjct: 228 SSGPGGQSVNTTDSAVRITHLPTGIIVSQQDEKSQHKNRAKAMKILRARLYDAERARQQA 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE+L+  +DAL
Sbjct: 288 ERAASRKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKILAGESLEEVVDAL 344


>gi|294085498|ref|YP_003552258.1| protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665073|gb|ADE40174.1| Protein chain release factor A [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 358

 Score =  336 bits (862), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 163/292 (55%), Positives = 219/292 (75%), Gaps = 6/292 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMA---TEELCLAIDEEKRLQSLLLKSLLPKDDADERDCIL 69
           E+   + ++ E  +D DML+MA    +EL   I +E++        LLPKD  D R+ IL
Sbjct: 58  ELSDAEVMVGEAGDDPDMLEMARLEMQELQAQIPDEQQKLQ---LLLLPKDRDDARNAIL 114

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           EVRAGTGG+EA+LFA D+F MY+R+S K GWKFEV+ V+E+ + GYKEA+A I+G  V+ 
Sbjct: 115 EVRAGTGGDEAALFASDLFGMYQRFSAKYGWKFEVMEVSETGIGGYKEATATITGSDVFA 174

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 189
           +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VDV +   DLRID +R+ G GG
Sbjct: 175 RLKFESGVHRVQRVPETETGGRIHTSAATVAVLPEAEDVDVEVVESDLRIDVFRASGPGG 234

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           Q  NTT+SAVR+TH+PTG+ +S QDE+SQH N+AKA+K+L A+LY+ ER+R+   R+  R
Sbjct: 235 QSVNTTDSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERARVQAERAADR 294

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE LD  IDAL+
Sbjct: 295 KGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIAGEALDEVIDALI 346


>gi|326386588|ref|ZP_08208210.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208903|gb|EGD59698.1| peptide chain release factor 1 [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 356

 Score =  336 bits (861), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 155/300 (51%), Positives = 216/300 (72%)

Query: 15  DGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG 74
           D L SL      D DM  +A EE+     E    +  L  ++LP+D+AD    +LE+RAG
Sbjct: 57  DELASLAALDEPDADMRALAEEEMARIRAELPEAERRLALAMLPRDNADSHPAMLEIRAG 116

Query: 75  TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE 134
           TGG+EA+LFA D+F+MYERY+ ++GWK EV+    SD+ G+KE  A ++G GV+ KLK+E
Sbjct: 117 TGGDEAALFAADLFRMYERYAAEQGWKVEVISANASDIGGFKEVIAHVAGQGVFAKLKYE 176

Query: 135 SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT 194
           SG+HRVQRVP+TE  GR+HTSA +VA+LP+ DEVDV + ++DL+ID YR+ G+GGQH NT
Sbjct: 177 SGVHRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVSIDDKDLKIDIYRASGAGGQHVNT 236

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SAVR+TH+PTG+ ++ QDERSQH NKAKA++VL  +LY++ R +   + ++ R   +G
Sbjct: 237 TDSAVRITHLPTGIVVTQQDERSQHKNKAKAMQVLRTRLYDLRREQAQGAEAEARRAMVG 296

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           SGDRSERIRTYNFPQGRVTDHR+ +T H + +++ G  L   IDAL  + +   +A+  S
Sbjct: 297 SGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILAGTGLGELIDALTAEDQAKRLAAMDS 356


>gi|414175690|ref|ZP_11430094.1| peptide chain release factor 1 [Afipia broomeae ATCC 49717]
 gi|410889519|gb|EKS37322.1| peptide chain release factor 1 [Afipia broomeae ATCC 49717]
          Length = 361

 Score =  336 bits (861), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/312 (50%), Positives = 218/312 (69%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R+   EI G+ +LI + + + DM  MA  E          L   +  +LLPKD  D
Sbjct: 49  VKAYRSAADEISGIDALIADSTTEPDMRAMAESERPQLEARRDELAQDIRIALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK +++  +E  + GYKE  A + 
Sbjct: 109 ERNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVDLISASEGTMGGYKEIVAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV ++N+DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDVAIKNDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER RI  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRIDS 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ G+ L   IDAL  +
Sbjct: 289 ERSAERKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALGELIDALTTE 348

Query: 304 QEMDAIASFGST 315
            +   +A  GST
Sbjct: 349 HQAKLLAEQGST 360


>gi|395792483|ref|ZP_10471910.1| peptide chain release factor 1 [Bartonella vinsonii subsp.
           arupensis Pm136co]
 gi|423713144|ref|ZP_17687404.1| peptide chain release factor 1 [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395423800|gb|EJF89989.1| peptide chain release factor 1 [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395432456|gb|EJF98442.1| peptide chain release factor 1 [Bartonella vinsonii subsp.
           arupensis Pm136co]
          Length = 359

 Score =  336 bits (861), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 164/310 (52%), Positives = 228/310 (73%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L    +EI  L+++I +   D +M ++A EEL L   + ++ +  L   LLPKD AD
Sbjct: 49  IRALNALYREITELETIINDKLTDIEMRNLAQEELPLLHQKIEQFEQELQILLLPKDVAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV ++E ++ GYKE  A IS
Sbjct: 109 EKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASHNWKVEVVSLSEGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE SGR+HTSA +VA+LP+A+E+D+ +R+ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETETSGRIHTSAATVAVLPEAEEIDIEIRSEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  ++EG +L+  I AL+  
Sbjct: 288 ERSASRKNQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRILEG-DLEELIHALISN 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTALLTEMD 356


>gi|340779042|ref|ZP_08698985.1| peptide chain release factor 1 [Acetobacter aceti NBRC 14818]
          Length = 352

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 163/310 (52%), Positives = 224/310 (72%), Gaps = 5/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I+ LR  Q E   LK L+    +D +M  +A  EL    D    LQ  +  ++LPKD AD
Sbjct: 47  INALRAVQAEEQDLKQLL----DDPEMKALAESELHEVKDRIGMLQQDVRLAMLPKDAAD 102

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILE+R   GG+EA+LFA ++F  Y RY+  +GWKFEV+   ES+L G +E  A IS
Sbjct: 103 ERSAILEIRPAAGGDEAALFASELFGAYRRYADLRGWKFEVMEYDESELGGLREGIATIS 162

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LK+ESG+HRVQRVP TE  GR+HTS ++VA+LP+A+EVDV++  +DLRID YR
Sbjct: 163 GKGVFARLKYESGVHRVQRVPATESQGRIHTSTITVAVLPEAEEVDVQIDEKDLRIDVYR 222

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+TH+PTG+ +++Q+E+SQH N+AKA+K+L ++LYE +R  +H 
Sbjct: 223 ASGAGGQHVNKTESAVRITHLPTGVVVAMQEEKSQHKNRAKAMKILRSRLYEQQRVSLHE 282

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           SR+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T H I  +M GE LD  +DAL+ +
Sbjct: 283 SRAADRKSQVGTGDRSERIRTYNFPQGRVTDHRIGLTLHKIDRVMLGE-LDEIVDALIQE 341

Query: 304 QEMDAIASFG 313
            + + +A+ G
Sbjct: 342 DQAEQLAAAG 351


>gi|409439217|ref|ZP_11266276.1| peptide chain release factor RF-1 [Rhizobium mesoamericanum
           STM3625]
 gi|408749122|emb|CCM77455.1| peptide chain release factor RF-1 [Rhizobium mesoamericanum
           STM3625]
          Length = 359

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 167/320 (52%), Positives = 232/320 (72%), Gaps = 11/320 (3%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSL 56
           +++++R  +K   E+  L+ L+ + S D++M D+A  EL    D ++RL++L   +   L
Sbjct: 45  VVTKIRAYEKAIAELADLEVLLNDKSVDREMRDLADLELP---DVKERLEALEQEIQILL 101

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD ADE+  ILE+RAGTGG EA+LFA D+F+MYERY+   GWK EV+  ++ +  G+K
Sbjct: 102 LPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAAHGWKVEVLSSSDGEAGGFK 161

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           E  A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED
Sbjct: 162 EIIATITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPED 221

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+AKA++VL ++LY+ 
Sbjct: 222 IRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDA 280

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MM GE +D  
Sbjct: 281 ERQRAESERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMVGE-IDEV 339

Query: 297 IDALLLQQEMDAIASFGSTQ 316
           +DAL+   +   +A  G  Q
Sbjct: 340 VDALMADYQASQLAQLGEQQ 359


>gi|68171785|ref|ZP_00545129.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
 gi|67998796|gb|EAM85504.1| Peptide chain release factor 1 [Ehrlichia chaffeensis str. Sapulpa]
          Length = 311

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 159/309 (51%), Positives = 222/309 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I +    QK+I GL+ LI     D ++  +A EE      +  +++  L  SLLPKD  D
Sbjct: 1   IDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKDKDD 60

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R+ ILE+RAGTGGEEA+LF  D+++MY +Y+++K WKFE +  + + + G+KE S  IS
Sbjct: 61  ARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISLCIS 120

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID YR
Sbjct: 121 GSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRIDVYR 180

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G GGQ  NTT+SAVR+THIP+G+ +  QDE+SQH NK+KALKVL A+LY +E+ +   
Sbjct: 181 SSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQKRDA 240

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
             S++R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+  NLD FI+AL+ +
Sbjct: 241 EISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEALIAE 300

Query: 304 QEMDAIASF 312
            E + + + 
Sbjct: 301 DEANKLKNL 309


>gi|241116888|ref|XP_002401657.1| protein releasing factor, putative [Ixodes scapularis]
 gi|215493201|gb|EEC02842.1| protein releasing factor, putative [Ixodes scapularis]
          Length = 358

 Score =  335 bits (860), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 158/302 (52%), Positives = 224/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 50  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ +++  + GYKEASA I 
Sbjct: 110 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DL+IDTYR
Sbjct: 170 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLKIDTYR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPT +T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 230 ASGAGGQHVNTTDSAVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 290 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 349

Query: 304 QE 305
            E
Sbjct: 350 DE 351


>gi|189182919|ref|YP_001936704.1| peptide chain release factor 1 [Orientia tsutsugamushi str. Ikeda]
 gi|238692229|sp|B3CQD1.1|RF1_ORITI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189179690|dbj|BAG39470.1| peptide chain release factor RF-1 [Orientia tsutsugamushi str.
           Ikeda]
          Length = 359

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 231/310 (74%), Gaps = 2/310 (0%)

Query: 3   LISELRTKQKEIDGLKSL--IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +I +L    K  + +K L  + +  +D ++  +A  EL   ++   +L+  +  SLLPK+
Sbjct: 44  IIEKLNRYLKAHENIKYLQQVIDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKE 103

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D ++ I+EVRAGTGG+EA+LFA  +F+MY RY+++K WKFE++ ++++++ GYKEASA
Sbjct: 104 SDDHKNAIIEVRAGTGGDEAALFAASLFQMYNRYAERKKWKFELLSISDTEIGGYKEASA 163

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG GV+  LKFESG+HRVQR+P TE +GR+HTSA +V +LP+A+EVDV++  +DL+ID
Sbjct: 164 LISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPEAEEVDVKIDAKDLKID 223

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYR+ G+GGQH NTT+SAVR+THIPTG+ +S QDE+SQH NKAKA+K+L A+LY++E+ +
Sbjct: 224 TYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQK 283

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               ++  R  Q+G+GDRSERIRTYN+PQGRVTDHR+ +T + I ++++   LD  I+ L
Sbjct: 284 SQQEQAMSRKVQVGTGDRSERIRTYNYPQGRVTDHRINLTLYKIEEIIQEGKLDEIINNL 343

Query: 301 LLQQEMDAIA 310
           + + E   IA
Sbjct: 344 ISENEAKKIA 353


>gi|49475009|ref|YP_033050.1| peptide chain release factor 1 [Bartonella henselae str. Houston-1]
 gi|61214620|sp|Q6G5T7.1|RF1_BARHE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49237814|emb|CAF27009.1| Peptide chain release factor 1 [Bartonella henselae str. Houston-1]
          Length = 359

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 164/301 (54%), Positives = 223/301 (74%), Gaps = 8/301 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           EI  L+++I +   D +M  +A EEL L   + ++L+  L   LLPKD ADE+  I+E+R
Sbjct: 58  EITDLETIISDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MYERY+  + WK EVV + E ++ GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +    RS  R  Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAENERSASRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL------LQQEM 306
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  I AL+      L  EM
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVLEG-DLDELIHALISDHQTALLMEM 355

Query: 307 D 307
           D
Sbjct: 356 D 356


>gi|297181089|gb|ADI17288.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_17D04]
          Length = 359

 Score =  335 bits (859), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 160/302 (52%), Positives = 222/302 (73%), Gaps = 6/302 (1%)

Query: 15  DGLKSLIYECSEDKDMLDMA---TEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           D    L  E ++D +M +MA    +E+   + EE     LLL   LP+D  D R+ ILEV
Sbjct: 60  DAAVMLAEEAADDAEMAEMAQAEIQEIEARLPEEMNSLQLLL---LPRDRDDSRNAILEV 116

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG+EA+LFA D+F MY+R++ K GW+FEV+ V+E+ + GYKEA+A I+G  V+ +L
Sbjct: 117 RAGTGGDEAALFASDLFGMYQRFAAKHGWRFEVMEVSETGIGGYKEATANIAGSDVFARL 176

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ ++  DLRID +R+ G GGQ 
Sbjct: 177 KFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDVDIDVQESDLRIDVFRASGPGGQS 236

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVR+THIPTG+ +S QDE+SQH N+AKA+K+L A+LY+ ER+R+   R+  R  
Sbjct: 237 VNTTDSAVRITHIPTGIMVSQQDEKSQHKNRAKAMKILRARLYDAERARLQAERAASRKG 296

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE LD  ++AL+ + +   +A 
Sbjct: 297 QVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKVIAGEALDEVVEALVAEDQAQRLAE 356

Query: 312 FG 313
            G
Sbjct: 357 GG 358


>gi|73667064|ref|YP_303080.1| peptide chain release factor 1 [Ehrlichia canis str. Jake]
 gi|119361538|sp|Q3YS23.1|RF1_EHRCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72394205|gb|AAZ68482.1| bacterial peptide chain release factor 1 (bRF-1) [Ehrlichia canis
           str. Jake]
          Length = 359

 Score =  335 bits (859), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 158/312 (50%), Positives = 224/312 (71%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + +I +  + QK+I  L+ LI     D ++  +A EE      +  ++++ L  SL+PKD
Sbjct: 46  ISVIDQYNSLQKDIADLEELINNPETDHELKSLAKEEFYERQKQLPKIKNKLKLSLIPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R+ ILE+RAGTGGEEA+LF  D+++MY +Y+++K WKFE +  + + + G+KE S 
Sbjct: 106 RDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSL 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 CISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIP+G+ +  QDE+SQH NK KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                S++R  QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+  NLD FIDAL
Sbjct: 286 RDSEISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLEDIMKEGNLDEFIDAL 345

Query: 301 LLQQEMDAIASF 312
           + + E + + + 
Sbjct: 346 IAEDEANKLKNL 357


>gi|359398832|ref|ZP_09191847.1| peptide chain release factor RF-1 [Novosphingobium
           pentaromativorans US6-1]
 gi|357599775|gb|EHJ61479.1| peptide chain release factor RF-1 [Novosphingobium
           pentaromativorans US6-1]
          Length = 356

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 150/286 (52%), Positives = 211/286 (73%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M  +A EE+     E    +  L  ++LP+D AD R  +LE+RAGTGG+EA+LFA D
Sbjct: 69  DPEMRALADEEIARIKSELPEAERKLAIAMLPRDAADSRPAMLEIRAGTGGDEAALFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +++MYER++ ++GWK E++    SD+ G+KE  A +SG GV+ KLKFESG+HRVQRVP+T
Sbjct: 129 LYRMYERFAAEQGWKVEMISANASDIGGFKEVVANVSGTGVFAKLKFESGVHRVQRVPVT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+  EVDV++ ++DL+ID YR+ G+GGQH NTT+SAVR+TH+P+
Sbjct: 189 ESGGRIHTSAATVAVLPEPSEVDVQIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHLPS 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDERSQH NKAKA++VL A+LYE  R     + ++ R   +GSGDRSERIRTYN
Sbjct: 249 GLVVICQDERSQHKNKAKAMQVLRARLYEKMRDEAQGAEAEARKAMVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           FPQGRVTDHR+ +T H + +++EG  L   +DAL+ + E   +A+ 
Sbjct: 309 FPQGRVTDHRINLTLHRLPEILEGPGLGELVDALIAEDEAKRLAAM 354


>gi|334139999|ref|YP_004533199.1| peptide chain release factor RF-1 [Novosphingobium sp. PP1Y]
 gi|333938023|emb|CCA91381.1| peptide chain release factor RF-1 [Novosphingobium sp. PP1Y]
          Length = 356

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 150/286 (52%), Positives = 211/286 (73%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M  +A EE+     E    +  L  ++LP+D AD R  +LE+RAGTGG+EA+LFA D
Sbjct: 69  DPEMRALADEEIARIKSELPEAERKLAIAMLPRDAADSRPAMLEIRAGTGGDEAALFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +++MYER++ ++GWK E++    SD+ G+KE  A +SG GV+ KLKFESG+HRVQRVP+T
Sbjct: 129 LYRMYERFAAEQGWKVEMISANSSDIGGFKEVVANVSGTGVFAKLKFESGVHRVQRVPVT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+  EVDV++ ++DL+ID YR+ G+GGQH NTT+SAVR+TH+P+
Sbjct: 189 ESGGRIHTSAATVAVLPEPSEVDVQIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHLPS 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDERSQH NKAKA++VL A+LYE  R     + ++ R   +GSGDRSERIRTYN
Sbjct: 249 GLVVICQDERSQHKNKAKAMQVLRARLYEKMRDEAQGAEAEARKAMVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           FPQGRVTDHR+ +T H + +++EG  L   +DAL+ + E   +A+ 
Sbjct: 309 FPQGRVTDHRINLTLHRLPEILEGPGLGELVDALIAEDEAKRLAAM 354


>gi|239947714|ref|ZP_04699467.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921990|gb|EER22014.1| peptide chain release factor 1 [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 355

 Score =  335 bits (858), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 158/302 (52%), Positives = 224/302 (74%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E    + E++   +   E   D   L+M  +E+    +   +L+  +  +LLPKDDAD
Sbjct: 47  IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +  I+EVRAG+GGEEA+LFA  +F MY+RY++ KGW+FE++ +++  + GYKEASA I 
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDMGIGGYKEASALIK 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+++ ++DL+IDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLKIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPT +T+++QDE+SQH NKAKALK+L A++YE ER +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTSITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++   LD F++AL+  
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346

Query: 304 QE 305
            E
Sbjct: 347 DE 348


>gi|452752732|ref|ZP_21952473.1| Peptide chain release factor 1 [alpha proteobacterium JLT2015]
 gi|451960123|gb|EMD82538.1| Peptide chain release factor 1 [alpha proteobacterium JLT2015]
          Length = 363

 Score =  334 bits (856), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 146/259 (56%), Positives = 205/259 (79%), Gaps = 1/259 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           +LPKD AD+R  ILE+RAGTGGEEA+LFA D+++MY+RY++ +GW+ E + ++ +D  G 
Sbjct: 105 MLPKDVADQRSAILEIRAGTGGEEAALFAADLYRMYQRYAEGRGWRVETMEMSAADAGGI 164

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A++VD+ + + 
Sbjct: 165 KEVIANVSGTGVFARLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEDVDIEINDS 224

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLR+D +R+ G+GGQH NTT+SAVR+TH+P+G+ +S QDE+SQH N+AKA+KVL A+L+E
Sbjct: 225 DLRVDVFRASGAGGQHVNTTDSAVRITHVPSGLVVSQQDEKSQHKNRAKAMKVLRARLFE 284

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           MER ++   R+  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H +  ++EGE +D 
Sbjct: 285 MEREKLASERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPSIIEGE-MDE 343

Query: 296 FIDALLLQQEMDAIASFGS 314
            I AL+ + E + +A  G+
Sbjct: 344 LIGALIAEDEAERLAGLGA 362


>gi|386347700|ref|YP_006045949.1| Peptide chain release factor 1 [Spirochaeta thermophila DSM 6578]
 gi|339412667|gb|AEJ62232.1| Peptide chain release factor 1 [Spirochaeta thermophila DSM 6578]
          Length = 357

 Score =  333 bits (855), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 157/292 (53%), Positives = 218/292 (74%), Gaps = 1/292 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           + E  +D ++ +MA EE+     E  R +  L   L+P D  D ++ ILE+RAGTGGEEA
Sbjct: 66  VLEEEDDHELKEMAREEIKALEGEIARTEQRLKLLLVPPDPLDGKNIILEIRAGTGGEEA 125

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA D+++MY RY+++KGWK E++  +E++L G++E   AISG  VYG L+FESG HRV
Sbjct: 126 ALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESGGHRV 185

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE  GR+HTSAV+VA+LP+ +E +V +R ED+R+D +RS G GGQ  NTT+SAVR
Sbjct: 186 QRIPVTESGGRIHTSAVTVAVLPEPEETEVEIRPEDIRVDVFRSSGPGGQSVNTTDSAVR 245

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +S QDE+SQH NKAKALK+L A+LYEME+ R    R+ +R  QIGSGDRSE
Sbjct: 246 ITHLPTGLVVSCQDEKSQHKNKAKALKILRARLYEMEKQRQESERAAMRRSQIGSGDRSE 305

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           RIRTYNFPQ RVTDHR+ +T + +  +M+G +LD  IDAL L  + +A+++ 
Sbjct: 306 RIRTYNFPQNRVTDHRINLTLYKLEAVMDG-DLDEIIDALRLAVQEEALSTM 356


>gi|402848548|ref|ZP_10896805.1| Peptide chain release factor 1 [Rhodovulum sp. PH10]
 gi|402501295|gb|EJW12950.1| Peptide chain release factor 1 [Rhodovulum sp. PH10]
          Length = 359

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 156/302 (51%), Positives = 217/302 (71%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           +EID +  ++ + + D ++  +A  E     +  +RL+  L  +L+PKD  D R+ I+E+
Sbjct: 55  REIDDVDEMMTDAATDAELRAVAASERSTLEETRERLEQELRLALIPKDAMDARNVIVEI 114

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG+EA+LFA D+F+MYERY+  +GWK E+V  +E  + GYKE  A I G G + +L
Sbjct: 115 RAGTGGDEAALFAGDLFRMYERYAALQGWKTEIVSASEGTMGGYKEIVAEIRGAGAFARL 174

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVDV +  +DL IDT RS G+GGQH
Sbjct: 175 KFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEVDVAIDEKDLEIDTMRSSGAGGQH 234

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            N T SA+RV H+P+G+ + +Q+ERSQH N+AKA+ +L AKLY+ ER R    R+  R  
Sbjct: 235 VNKTESAIRVKHVPSGIVVFVQEERSQHRNRAKAMAMLRAKLYDAERQRRDSERAADRRG 294

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+GSGDRSERIRTYNFPQGRVTDHR+G+T + +  +M+GE L   +DAL+ +     +A+
Sbjct: 295 QVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLPQVMQGEALGEIVDALMAEHNAALLAA 354

Query: 312 FG 313
            G
Sbjct: 355 EG 356


>gi|395787116|ref|ZP_10466717.1| peptide chain release factor 1 [Bartonella birtlesii LL-WM9]
 gi|395411540|gb|EJF78061.1| peptide chain release factor 1 [Bartonella birtlesii LL-WM9]
          Length = 359

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 167/314 (53%), Positives = 226/314 (71%), Gaps = 11/314 (3%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +I+ +RT      EI  L+ +I +   D +M  +A EEL L   + ++L+  L   LLPK
Sbjct: 45  IIASIRTLNALYAEITELEIIINDKLTDAEMRYLAQEELALLCQKMEQLEKELQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV + E ++ GYKE  
Sbjct: 105 DVADEKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASHNWKVEVVSLNEGEVGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A ISG GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 AGISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+ +AL++L A+L+++ER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRTRALQILRARLFDIERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           +    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE LD  I A
Sbjct: 284 KAENERSASRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEGE-LDEIIHA 342

Query: 300 LL------LQQEMD 307
           L+      L  EMD
Sbjct: 343 LISDHQTALLMEMD 356


>gi|92116091|ref|YP_575820.1| peptide chain release factor 1 [Nitrobacter hamburgensis X14]
 gi|119361567|sp|Q1QQY7.1|RF1_NITHX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91798985|gb|ABE61360.1| bacterial peptide chain release factor 1 (bRF-1) [Nitrobacter
           hamburgensis X14]
          Length = 361

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 218/310 (70%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R  + EI G+ ++I + + D +M  MA  E          L   +  +LLPKD  D
Sbjct: 49  VKNWRAVKTEIAGIDAMIADPATDAEMRAMAEAERPALGARGDELAQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK E +  +E  + GYKE  A + 
Sbjct: 109 ERNVMLEIRAGTGGDEASLFAGDLFRMYERFAGLQGWKVEAISASEGTMGGYKEIVAEVR 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y KLKFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVDV ++ +DLRI+T R
Sbjct: 169 GRGAYAKLKFESGVHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDVDIKTDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER RI+ 
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRINA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +RS  R +Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ G+ L   IDAL  +
Sbjct: 289 ARSADRKDQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTTE 348

Query: 304 QEMDAIASFG 313
            +   +A+ G
Sbjct: 349 HQAAQLATEG 358


>gi|341614013|ref|ZP_08700882.1| peptide chain release factor 1 [Citromicrobium sp. JLT1363]
          Length = 355

 Score =  333 bits (855), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 224/310 (72%), Gaps = 4/310 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  EL+  ++E+ GL+ ++     D +M  MA EEL         L+  L  ++LP+D A
Sbjct: 48  LALELKAAREEVAGLEDML----SDPEMRAMAEEELEALNQRIPELEQQLAVAMLPRDSA 103

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D +  +LE+RAGTGG+EA+LFA D+++MYER++ ++GWK E V ++ S++ G+KE  A +
Sbjct: 104 DAKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVANV 163

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ DEVDV++   DL+IDTY
Sbjct: 164 TGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQIDAGDLKIDTY 223

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH NTT+SA+R+TH+PTG+ ++ QD RSQH N+ KA++VL A+LYE +R    
Sbjct: 224 RASGAGGQHVNTTDSAIRITHLPTGLVVTCQDGRSQHKNREKAMQVLRARLYEQQREATE 283

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + ++ R   +GSGDRSERIRTYNFPQGRVTDHR+G+T H + +++ G  L   +DAL+ 
Sbjct: 284 GAEAEARKAMVGSGDRSERIRTYNFPQGRVTDHRIGLTLHKLPEIIAGPGLGELVDALIA 343

Query: 303 QQEMDAIASF 312
           + E   +A+ 
Sbjct: 344 EDEAKRLAAM 353


>gi|297182853|gb|ADI19004.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_05I22]
          Length = 334

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 157/289 (54%), Positives = 215/289 (74%), Gaps = 8/289 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAID----EEKRLQSLLLKSLLPK 59
           I  +R  + E+    +++ E + D +M  MA  E+ L  +    E++RLQ LLL    PK
Sbjct: 49  IELVRALESELKDAITMVVEAAGDDEMQAMAEAEVTLLKERIPIEKERLQLLLL----PK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D  D R+ ILEVRAGTGG+EA+LF  ++F MY+R++ K GW+FEV+ V+E+ + GYKEA+
Sbjct: 105 DKDDSRNAILEVRAGTGGDEAALFGANLFSMYQRFAAKNGWRFEVMEVSETGIGGYKEAT 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A ISG+ V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DLRI
Sbjct: 165 ATISGIDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEVDIDIDENDLRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           D +RS G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQH N+AKA+K+L A+LY+ ER+
Sbjct: 225 DVFRSSGPGGQSVNTTDSAVRITHMPTGIVVSQQDEKSQHKNRAKAMKILRARLYDAERA 284

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMM 288
           R+   R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M
Sbjct: 285 RVESERAAARKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVM 333


>gi|393774342|ref|ZP_10362707.1| peptide chain release factor RF-1 [Novosphingobium sp. Rr 2-17]
 gi|392720198|gb|EIZ77698.1| peptide chain release factor RF-1 [Novosphingobium sp. Rr 2-17]
          Length = 356

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 156/310 (50%), Positives = 222/310 (71%), Gaps = 3/310 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           + +E+ + + E++ L+SL      D +M  +A EE+     E    +  +  S+LP+D A
Sbjct: 48  IAAEIMSMRGELESLQSL---EDPDPEMRALAAEEVARLKTELPEAERRMAISMLPRDAA 104

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R  +LE+RAGTGG+EA+LFA D+++MYERY+ + GW+ E+V    SD+ G+KE  A +
Sbjct: 105 DARPAMLEIRAGTGGDEAALFAADLYRMYERYAAELGWRVEMVSANASDVGGFKEVVANV 164

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+  EVDV++ ++DL+ID Y
Sbjct: 165 TGNGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPTEVDVQIEDKDLKIDIY 224

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH NTT+SAVR+TH+PT + +  QDERSQH NKAKA++VL A+LYE  R    
Sbjct: 225 RASGAGGQHVNTTDSAVRITHLPTNLVVICQDERSQHKNKAKAMQVLRARLYEKMRDEAQ 284

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + ++ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG  L   IDAL+ 
Sbjct: 285 GAEAEARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLVELIDALIA 344

Query: 303 QQEMDAIASF 312
           + E   +A+ 
Sbjct: 345 EDEAKRLAAM 354


>gi|403530102|ref|YP_006664631.1| peptide chain release factor 1 [Bartonella quintana RM-11]
 gi|403232174|gb|AFR25917.1| peptide chain release factor 1 [Bartonella quintana RM-11]
          Length = 359

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 161/301 (53%), Positives = 222/301 (73%), Gaps = 8/301 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           EI  L+++I +   D +M ++A EEL     + ++L+  L   LLPKD  DE+  I+E+R
Sbjct: 58  EITELETIISDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LF  D+F+MYERY+    WK EV+ + E ++ GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++E+ +    RS  R  Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQKKAESERSASRKNQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL------LQQEM 306
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  I+AL+      L  EM
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDELINALISDYQTALLTEM 355

Query: 307 D 307
           D
Sbjct: 356 D 356


>gi|218672481|ref|ZP_03522150.1| peptide chain release factor 1 [Rhizobium etli GR56]
          Length = 352

 Score =  333 bits (854), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 225/302 (74%), Gaps = 5/302 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E+  L +L+ + S D++M D+A  EL    +  + L+  +   LLPK
Sbjct: 45  VVTKIRAYEKAVAELADLDTLLEDKSVDREMRDLAELELPEVKERIEALEQEMQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +K WK EV+  +E +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKSWKVEVLSASEGEAGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+ ER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342

Query: 300 LL 301
           L+
Sbjct: 343 LM 344


>gi|49473852|ref|YP_031894.1| peptide chain release factor 1 [Bartonella quintana str. Toulouse]
 gi|61214617|sp|Q6G0R0.1|RF1_BARQU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|49239355|emb|CAF25688.1| Peptide chain release factor 1 [Bartonella quintana str. Toulouse]
          Length = 359

 Score =  333 bits (854), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 161/301 (53%), Positives = 222/301 (73%), Gaps = 8/301 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           EI  L+++I +   D +M ++A EEL     + ++L+  L   LLPKD  DE+  I+E+R
Sbjct: 58  EITELETIISDKLTDVEMRNLAQEELPPLFQKMEKLEKELQILLLPKDITDEKSAIIEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LF  D+F+MYERY+    WK EV+ + E ++ GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFVGDLFRMYERYANAYNWKVEVISLNEGEVGGYKEIIATISGKGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++E+ +    RS  R  Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIEQKKAESERSASRKNQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL------LQQEM 306
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  I+AL+      L  EM
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDELINALISDYQTALLTEM 355

Query: 307 D 307
           D
Sbjct: 356 D 356


>gi|395782594|ref|ZP_10462980.1| peptide chain release factor 1 [Bartonella rattimassiliensis 15908]
 gi|395417331|gb|EJF83670.1| peptide chain release factor 1 [Bartonella rattimassiliensis 15908]
          Length = 358

 Score =  333 bits (854), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 163/310 (52%), Positives = 226/310 (72%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L    KEI  L+++I +   D +M ++A EEL     + ++L+  L   LLPKD AD
Sbjct: 49  IRALNVLYKEISELETIINDKQTDIEMRNLAQEELPSLYKKVEQLEKELQILLLPKDVAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LF+ D+F+MYERY+    WK EV+ ++E ++ GYKE  A IS
Sbjct: 109 EKSAIVEIRAGTGGSEAALFSGDLFRMYERYAHAHNWKVEVISISEGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLK+ESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R
Sbjct: 169 GKGVFSKLKYESGVHRVQRIPETETGGRIHTSASTVAVLPEAEEIDIDIRPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  I AL+  
Sbjct: 288 ERSASRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDELIHALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTALLMEMD 356


>gi|296282001|ref|ZP_06859999.1| peptide chain release factor 1 [Citromicrobium bathyomarinum JL354]
          Length = 355

 Score =  333 bits (853), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 222/310 (71%), Gaps = 4/310 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  EL+  ++E+ GL  ++     D +M DMA EEL         L+  L  ++LP+D A
Sbjct: 48  LALELKAAREEVAGLDEMLA----DPEMRDMAEEELEALNQRIPELEQQLAVAMLPRDSA 103

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D +  +LE+RAGTGG+EA+LFA D+++MYER++ ++GWK E V ++ S++ G+KE  A +
Sbjct: 104 DAKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMSASEVGGFKEIVAHV 163

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ DEVDV++   DL+IDTY
Sbjct: 164 TGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQVDPGDLKIDTY 223

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH NTT+SA+R+TH+PTG+ ++ QD RSQH N+ +A++VL A+LYE +R    
Sbjct: 224 RASGAGGQHVNTTDSAIRITHLPTGLVVTCQDGRSQHKNREQAMQVLRARLYEQQRDAAQ 283

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + ++ R   +GSGDRSERIRTYNFPQGRVTDHR+G+T   +  ++ G  L   +DAL+ 
Sbjct: 284 GAEAEARKAMVGSGDRSERIRTYNFPQGRVTDHRIGLTLQKLPQIIAGPGLGELVDALIA 343

Query: 303 QQEMDAIASF 312
           + E   +A+ 
Sbjct: 344 EDEAKRLAAM 353


>gi|240849863|ref|YP_002971251.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
 gi|240266986|gb|ACS50574.1| peptide chain release factor 1 [Bartonella grahamii as4aup]
          Length = 358

 Score =  333 bits (853), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 227/310 (73%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L    KEI  L+++I +   D +M ++A EEL L   + ++ +  L   LLPKD AD
Sbjct: 49  IRALNALYKEITELETIINDKQTDVEMRNLAQEELPLLYKKVEQFEKELQILLLPKDVAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E++ I+E+RAGTGG EA+LF+ D+F+MYERY+    WK EV+ ++E ++ GYKE  A IS
Sbjct: 109 EKNAIVEIRAGTGGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLK+ESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R
Sbjct: 169 GKGVFSKLKYESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIDIRPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  + AL+  
Sbjct: 288 ERSASRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDELLHALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTTLLMEMD 356


>gi|406990113|gb|EKE09797.1| hypothetical protein ACD_16C00105G0010 [uncultured bacterium]
          Length = 359

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 165/312 (52%), Positives = 228/312 (73%), Gaps = 4/312 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEE--KRLQSLLLKSLLPKDD 61
           I E +   ++   L+ L+ + S DK++ DMA ++L  +I E+  KRL  + L  LLPKD 
Sbjct: 48  IMEWQLLNRDHKNLEELLKDPSLDKELKDMACDDLQ-SIHEKLPKRLHEIKL-LLLPKDV 105

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            D+++ ILEVRAGTGGEEA+LFA D+ +MY+RY++ +GWKFE++  +++ L G KEASA+
Sbjct: 106 DDDKNAILEVRAGTGGEEAALFAADLLRMYQRYAEIQGWKFELMHESDTGLGGIKEASAS 165

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           ISG GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+ +EVD+ +  +DLRID 
Sbjct: 166 ISGKGVFAKLKFESGVHRVQRIPATEAGGRIHTSAATVAVLPEVEEVDIHIEEKDLRIDV 225

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           +RS G GGQ  NTT+SAVR+TH+P+G+ +  QDE+SQH NK KALK+L A+LYE +R+  
Sbjct: 226 FRSSGPGGQSVNTTDSAVRITHLPSGVVVQQQDEKSQHKNKEKALKILRARLYEHQRAER 285

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
              R+  R  QIGSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M+G  LD  I  L+
Sbjct: 286 DAERAAHRKSQIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMDGSALDEIIQPLI 345

Query: 302 LQQEMDAIASFG 313
            + +   +A  G
Sbjct: 346 SENQAARLADVG 357


>gi|307719604|ref|YP_003875136.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
 gi|306533329|gb|ADN02863.1| peptide chain release factor 1 [Spirochaeta thermophila DSM 6192]
          Length = 357

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/296 (53%), Positives = 222/296 (75%), Gaps = 9/296 (3%)

Query: 21  IYECSEDKDMLDMATEELCLAIDE----EKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           + E  +D ++ +MA EE+    D+    E+RL+ LL+    P D  D ++ ILE+RAGTG
Sbjct: 66  VLEEEDDHELKEMAREEIKALEDQILHTEQRLKLLLV----PPDPLDGKNIILEIRAGTG 121

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           GEEA+LFA D+++MY RY+++KGWK E++  +E++L G++E   AISG  VYG L+FESG
Sbjct: 122 GEEAALFAADLYRMYARYAERKGWKMEIMEASETELGGFRELVCAISGKEVYGHLRFESG 181

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
            HRVQR+P+TE  GR+HTSAV+VA+LP+ +E +V +R ED+R+D +RS G GGQ  NTT+
Sbjct: 182 GHRVQRIPVTESGGRIHTSAVTVAVLPEPEETEVEIRPEDIRVDVFRSSGPGGQSVNTTD 241

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVR+TH+PTG+ ++ QDE+SQH NKAKALK+L A+LYEME+ R    R+ +R  QIGSG
Sbjct: 242 SAVRITHLPTGLVVTCQDEKSQHKNKAKALKILRARLYEMEKQRQESERAAMRRSQIGSG 301

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           DRSERIRTYNFPQ RVTDHR+ +T + +  +M+G +LD  IDAL L  + +A+++ 
Sbjct: 302 DRSERIRTYNFPQNRVTDHRINLTLYKLEAVMDG-DLDEIIDALRLAVQEEALSTM 356


>gi|163793919|ref|ZP_02187893.1| Protein chain release factor A [alpha proteobacterium BAL199]
 gi|159181030|gb|EDP65547.1| Protein chain release factor A [alpha proteobacterium BAL199]
          Length = 356

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/265 (59%), Positives = 212/265 (80%)

Query: 48  LQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGV 107
           L+  ++  LLP+D+AD R+ ILEVRAGTGG+EA+LFA D+F MY+RY+Q +GW+FEV+ V
Sbjct: 91  LERAMMLHLLPRDEADARNAILEVRAGTGGDEAALFAADLFAMYQRYAQGRGWRFEVMEV 150

Query: 108 TESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE 167
           +E+++ GYKEA A ISG  V+  LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E
Sbjct: 151 SENEIGGYKEAIATISGQSVFAHLKFESGVHRVQRVPATESQGRIHTSAATVAVLPEAEE 210

Query: 168 VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALK 227
           VDV + ++DLRID YRS G+GGQH NTT+SAVR+TH+PTG+ ++ QDE+SQH N+AKA+K
Sbjct: 211 VDVAIDDKDLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGVVVTQQDEKSQHKNRAKAMK 270

Query: 228 VLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDM 287
           +L A+L++ ER+R    R+  R  QIGSGDRSERIRTYNFPQGRVTDHR+ +T + I  +
Sbjct: 271 ILRARLFDQERTRRDSERAADRKSQIGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKV 330

Query: 288 MEGENLDIFIDALLLQQEMDAIASF 312
           M GE LD  +DAL+ + E + +A+ 
Sbjct: 331 MSGEALDEIVDALIAEDEAERLATL 355


>gi|323136601|ref|ZP_08071682.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
 gi|322397918|gb|EFY00439.1| peptide chain release factor 1 [Methylocystis sp. ATCC 49242]
          Length = 356

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 161/297 (54%), Positives = 219/297 (73%), Gaps = 1/297 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  Q+E+D L +++ + S D +M  +A  E   A ++ +   + L  +LLPKD+AD
Sbjct: 47  IRAWRDAQREVDDLAAMLADSSLDPEMRALAESETDGAREKLEAAANTLRLALLPKDEAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+ Y++Y+  KGW+ E+V  +   L G+KE  A I 
Sbjct: 107 EKGVILEVRAGTGGDEAALFAGDLFRAYQKYAALKGWRVELVSESPGALGGFKEIVAEII 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GVYG+LKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA++VD+ +  +DL+IDT R
Sbjct: 167 GRGVYGRLKFESGVHRVQRVPETETQGRIHTSAATVAVLPQAEDVDIDIDEKDLQIDTMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIP+G+ + +Q+ERSQH NKAKA+ VL ++LY+ ER R+  
Sbjct: 227 AQGAGGQHVNKTESAIRITHIPSGIVVMMQEERSQHRNKAKAMNVLRSRLYDAERQRLDK 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            RS  R +Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEGE  D  IDAL
Sbjct: 287 ERSDDRKQQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-FDEIIDAL 342


>gi|57239178|ref|YP_180314.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579136|ref|YP_197348.1| peptide chain release factor 1 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58617189|ref|YP_196388.1| peptide chain release factor 1 [Ehrlichia ruminantium str. Gardel]
 gi|75432752|sp|Q5FGZ2.1|RF1_EHRRG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|81557311|sp|Q5HB80.1|RF1_EHRRW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|57161257|emb|CAH58178.1| peptide release factor 1 [Ehrlichia ruminantium str. Welgevonden]
 gi|58416801|emb|CAI27914.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Gardel]
 gi|58417762|emb|CAI26966.1| Peptide chain release factor 1 (RF-1) [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 359

 Score =  332 bits (851), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 158/313 (50%), Positives = 222/313 (70%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + +I E    QK+I  L+ LI     D ++ ++A EE      +  +++  L  SLLPKD
Sbjct: 46  ISVIDEYNAVQKDIKDLQELINNQETDTELKNLAKEEFYELQKQLPKVKHKLKLSLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R+ ILE+RAGTGGEEA+LF  D+++MY +Y++KK WK E +  + + + G+KE S 
Sbjct: 106 KDDARNAILEIRAGTGGEEAALFVTDLYRMYIKYAEKKNWKIEQINSSSTGIGGHKEVSL 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG  V+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 CVSGSNVFAKLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIP+G+ +  QDE+SQH NK KALKVL A+LY++E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYDLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                S+LR  QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+  +LD  I+AL
Sbjct: 286 RDAEISQLRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLEDIMKEGDLDELIEAL 345

Query: 301 LLQQEMDAIASFG 313
           + + E + + +  
Sbjct: 346 IAEDEANKLKNLN 358


>gi|85375680|ref|YP_459742.1| peptide chain release factor 1 [Erythrobacter litoralis HTCC2594]
 gi|122543160|sp|Q2N5U6.1|RF1_ERYLH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|84788763|gb|ABC64945.1| protein chain release factor A [Erythrobacter litoralis HTCC2594]
          Length = 355

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 157/313 (50%), Positives = 227/313 (72%), Gaps = 10/313 (3%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCL---AIDEEKRLQSLLLKSLLPK 59
           + +E++  ++EI GL+ ++     D +M  MA EEL     A+ E++R  ++   ++LPK
Sbjct: 48  VAAEVKAMREEIGGLEEMLA----DPEMKAMAQEELAAIREALPEKERQLAI---AMLPK 100

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D AD +  +LE+RAGTGG+EA+LFA D+++MYER++ ++GWK E V +  S++ G+KE  
Sbjct: 101 DSADNKPAMLEIRAGTGGDEAALFAGDLYRMYERFAGEQGWKVEPVSMNASEVGGFKEIV 160

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ DEVDV++ ++DL+I
Sbjct: 161 ANVSGTGVFAKLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEPDEVDVQIDDKDLKI 220

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           D YR+ G+GGQH NTT+SAVR+TH+PTG+ +  QDERSQH NKAKA++VL  +LY+  R 
Sbjct: 221 DIYRASGAGGQHVNTTDSAVRITHLPTGIVVQQQDERSQHKNKAKAMQVLRTRLYDHLRE 280

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           +     +  R   +GSGDRSERIRTYNFPQGRVTDHR+G+T H + +++ G  L   + A
Sbjct: 281 QSQGEEAAARKAMVGSGDRSERIRTYNFPQGRVTDHRIGLTLHKLDEIIAGPGLGELVGA 340

Query: 300 LLLQQEMDAIASF 312
           L+ + E   +A+ 
Sbjct: 341 LIAEDEAKRLAAL 353


>gi|389695992|ref|ZP_10183634.1| peptide chain release factor 1 [Microvirga sp. WSM3557]
 gi|388584798|gb|EIM25093.1| peptide chain release factor 1 [Microvirga sp. WSM3557]
          Length = 362

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 160/301 (53%), Positives = 218/301 (72%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  +  ++GL++LI + S D +M  +A +EL  A ++ +R    L   LLPKD+AD
Sbjct: 50  IRAYRAMEDNLNGLQALIDDASTDAEMRSLAEDELPQAREDLERAAQDLRIMLLPKDEAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG+EA+LFA D+ +MY RY+  KGWK E+V  +E    GYKE  A I 
Sbjct: 110 EKSAILEIRAGTGGDEAALFAGDLLRMYTRYADLKGWKVEIVSESEGTAGGYKEVVAEIK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VDV L + DL+IDT R
Sbjct: 170 GRGVFARLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEDVDVVLNDADLKIDTMR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG  + +QDERSQH N+A+A+ +L A+LY+ ER+    
Sbjct: 230 AQGAGGQHVNKTESAIRITHIPTGTVVFVQDERSQHKNRARAMALLRARLYDAERTAKDA 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +++ G  LD  IDAL+ +
Sbjct: 290 ARAADRKAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVISGNALDELIDALITE 349

Query: 304 Q 304
            
Sbjct: 350 H 350


>gi|374572180|ref|ZP_09645276.1| peptide chain release factor 1 [Bradyrhizobium sp. WSM471]
 gi|374420501|gb|EHR00034.1| peptide chain release factor 1 [Bradyrhizobium sp. WSM471]
          Length = 361

 Score =  332 bits (850), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 156/300 (52%), Positives = 217/300 (72%), Gaps = 6/300 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAIDEEKRLQSLLLKSLLPKD 60
           +   R+  KE+   ++LI + + D +M  MA    +EL   I+E   L   +  +LLPKD
Sbjct: 49  VKTYRSAVKELADTEALIADTATDAEMRAMAEAERDELTPKIEE---LVQKIRVALLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A
Sbjct: 106 AMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGSVGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            + G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA++P+ +EVDV +RN+DLRI+
Sbjct: 166 EVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVMPEVEEVDVEIRNDDLRIE 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+GG+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ E+ R
Sbjct: 226 TMRAGGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQR 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +  +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE L    DAL
Sbjct: 286 LDAARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVMAGEALGELTDAL 345


>gi|398378025|ref|ZP_10536193.1| peptide chain release factor 1 [Rhizobium sp. AP16]
 gi|397725796|gb|EJK86243.1| peptide chain release factor 1 [Rhizobium sp. AP16]
          Length = 359

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 159/314 (50%), Positives = 227/314 (72%), Gaps = 5/314 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E   L++++ + S D++M D+A  EL    +  + L+  +   LLPK
Sbjct: 45  VVAKIRDYEKAIAEASDLEAMLADKSVDREMRDLADMELPEVKERIELLEQDIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LF  D+F+MYER++   GWK E++  ++ +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVI 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGKGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++L++MER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLFDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE +D  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IDEVVDA 342

Query: 300 LLLQQEMDAIASFG 313
           L    +   +A  G
Sbjct: 343 LRADYQASQLAQLG 356


>gi|222087303|ref|YP_002545840.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
 gi|254790855|sp|B9JB75.1|RF1_AGRRK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221724751|gb|ACM27907.1| peptide chain release factor 1 [Agrobacterium radiobacter K84]
          Length = 359

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 159/314 (50%), Positives = 227/314 (72%), Gaps = 5/314 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++++R  +K   E   L++++ + S D++M D+A  EL    +  + L+  +   LLPK
Sbjct: 45  VVAKIRDYEKAIAEASDLEAMLADKSVDREMRDLADMELPEVKERIEVLEQDIQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA+LF  D+F+MYER++   GWK E++  ++ +  GYKE  
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFGGDLFRMYERFAANNGWKVEILSASDGEAGGYKEVI 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGKGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++L++MER 
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLFDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE +D  +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IDEVVDA 342

Query: 300 LLLQQEMDAIASFG 313
           L    +   +A  G
Sbjct: 343 LRADYQASQLAQLG 356


>gi|406707942|ref|YP_006758294.1| peptide chain release factor 1 (bRF-1) [alpha proteobacterium
           HIMB59]
 gi|406653718|gb|AFS49117.1| bacterial peptide chain release factor 1 (bRF-1) [alpha
           proteobacterium HIMB59]
          Length = 359

 Score =  331 bits (848), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 158/300 (52%), Positives = 219/300 (73%), Gaps = 1/300 (0%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + L  +++  + EI+G K  I E   D+++  +A +EL +   + ++    LL +LLPKD
Sbjct: 46  ISLSDDIKKLENEIEGYKE-ILENENDEELRSLAKQELPIYEKDLEQKNRELLIALLPKD 104

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
           +AD+++ ILE+RAGTGG+EA+LFA D+F+MYERYS  K W F+ +   E+ L+G KEA  
Sbjct: 105 EADDKNVILEIRAGTGGDEAALFAGDLFRMYERYSAMKNWNFQPMEKNETGLKGVKEAII 164

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G GV+  LK ESG+HRVQR+P TE  GR+HTSA +VA+LP+A+EVDV ++  DLRID
Sbjct: 165 EIKGDGVFKFLKNESGVHRVQRIPETESGGRIHTSAATVAVLPEAEEVDVDIKESDLRID 224

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRSGG+GGQ  NTT+SAVR+TH+PTG+ ++ QDERSQH NKAKALK+L +++Y++ER +
Sbjct: 225 VYRSGGAGGQSVNTTDSAVRITHLPTGIVVTQQDERSQHKNKAKALKILRSRIYDVERQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                S  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + +   + GE L+  I AL
Sbjct: 285 KQQEESSNRKSQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKLDQFLTGEALEEMISAL 344


>gi|383649036|ref|ZP_09959442.1| peptide chain release factor 1 [Sphingomonas elodea ATCC 31461]
          Length = 357

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 162/293 (55%), Positives = 210/293 (71%), Gaps = 11/293 (3%)

Query: 27  DKDMLDMATEEL-----CLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEAS 81
           D ++  MA EEL      LA  E K     L  +LLPKD ADER  +LE+RAG GG+EA+
Sbjct: 71  DDELRAMAVEELRANEGTLAEAERK-----LALALLPKDAADERPALLEIRAGVGGDEAA 125

Query: 82  LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 141
           LFA D+ +MY+RY+ + GW+ E++  + S+  GYKE    I+G GV+ KLKFESG+HRVQ
Sbjct: 126 LFAGDLLRMYQRYADRLGWRTELISASTSEAGGYKEVVVGITGTGVFAKLKFESGVHRVQ 185

Query: 142 RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           RVP TE  GR+HTSA +VA+LP+A+E DV++ ++DLRID YR+ G GGQ  NTT+SAVR+
Sbjct: 186 RVPATEAGGRIHTSAATVAVLPEAEEADVQIDDKDLRIDIYRASGPGGQGVNTTDSAVRI 245

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QDERSQH NKAKA+KVL  +LYE ER R+   R   R   +GSGDRSER
Sbjct: 246 THLPTGIVVIQQDERSQHKNKAKAMKVLRTRLYEAERERLAAERVGARRSMVGSGDRSER 305

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           IRTYNFPQGRVTDHR+ +T H + +++EGE LD  + AL+ Q E D +A   S
Sbjct: 306 IRTYNFPQGRVTDHRINLTLHRLPEILEGE-LDELVGALVSQDEADRLAQLDS 357


>gi|158426116|ref|YP_001527408.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
 gi|158333005|dbj|BAF90490.1| peptide chain release factor 1 [Azorhizobium caulinodans ORS 571]
          Length = 357

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 158/308 (51%), Positives = 219/308 (71%), Gaps = 4/308 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  LR  ++++   + L+     D +M D+A  E+     E + L   +  +LLPKD  D
Sbjct: 50  VRALRAAERDLADARELLA----DPEMRDLAQSEVTRLEAELETLAKEVRLALLPKDAMD 105

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILEVRAGTGG+EA+LFA D+F+MY RY+ +KGW  E++  +E  + GYKE  AA+ 
Sbjct: 106 ERGVILEVRAGTGGDEAALFAGDLFRMYARYAAEKGWSVELLSESEGTVGGYKEVVAAVH 165

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A++VDV +   DLRID YR
Sbjct: 166 GRGAYARLKFESGVHRVQRVPDTETSGRIHTSAATVAVLPEAEDVDVDINESDLRIDVYR 225

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+THIPTGM +++QDERSQH NKA+A+ +L +++ + ER +   
Sbjct: 226 AQGAGGQHVNKTESAVRITHIPTGMVVAVQDERSQHRNKARAMALLRSRMLDEERQKADA 285

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++M G+ LD  ID LL +
Sbjct: 286 NRAADRKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVMTGQALDEIIDPLLTE 345

Query: 304 QEMDAIAS 311
            +   +A+
Sbjct: 346 HQASLMAA 353


>gi|302759761|ref|XP_002963303.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
 gi|300168571|gb|EFJ35174.1| hypothetical protein SELMODRAFT_438470 [Selaginella moellendorffii]
          Length = 391

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 170/309 (55%), Positives = 217/309 (70%), Gaps = 30/309 (9%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +I  LR K+KE+ GLK L+ E  ED++M  +A+ EL  A  E +  Q  +L  L+PKD+A
Sbjct: 95  MIKALRAKEKEVIGLKELVKESVEDEEMRRLASGELQTATREVRDAQHDVLLELIPKDEA 154

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKM------YERYSQKKGWKFEVVGVTESDLRGYK 116
                    RAG       +F  D+F +      Y++Y+    W+FEV+ +T +D RGYK
Sbjct: 155 ARS------RAGKCSLMCLMF--DMFHLIFRSWRYDKYAANNSWRFEVLSITTTDTRGYK 206

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EASAAISG GVYG LKFESG+HRVQRVP+TEK+GR+HTS  SVAILP+A+EVDV +RN++
Sbjct: 207 EASAAISGDGVYGALKFESGVHRVQRVPVTEKAGRIHTSTASVAILPEANEVDVEIRNDE 266

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           ++IDTYR+GG+GGQH NTT SAVRVTH PTG+ ++IQD R                LYE+
Sbjct: 267 IKIDTYRAGGAGGQHVNTTCSAVRVTHAPTGIVVAIQDTR----------------LYEL 310

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ERSR   SRS+LR +QIGS DRSERIRTYNFPQGRVTDHRVG+T HAI  +MEG  L+IF
Sbjct: 311 ERSRAAASRSELRQDQIGSSDRSERIRTYNFPQGRVTDHRVGVTQHAIEQIMEGIGLEIF 370

Query: 297 IDALLLQQE 305
           ++AL +Q E
Sbjct: 371 VNALKMQHE 379


>gi|260755553|ref|ZP_05867901.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
 gi|260675661|gb|EEX62482.1| peptide chain release factor 1 [Brucella abortus bv. 6 str. 870]
          Length = 342

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 158/280 (56%), Positives = 212/280 (75%), Gaps = 7/280 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
           I EL   + E   L ++  + S D +M  +A EEL    + EKR+  L   +   LLPKD
Sbjct: 67  IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 123

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
            AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V  +E D  GYKE  A
Sbjct: 124 AADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 183

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 184 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 243

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 244 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 302

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGIT 280
               RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T
Sbjct: 303 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLT 342


>gi|410943223|ref|ZP_11374964.1| peptide chain release factor 1 [Gluconobacter frateurii NBRC
           101659]
          Length = 353

 Score =  330 bits (847), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 160/310 (51%), Positives = 223/310 (71%), Gaps = 5/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   +  +K+ +G ++L+ +  E K++  +  EE+   I E   L+  L  +LLPKD AD
Sbjct: 48  IQAWQAAEKQREGAQALLAD-PEMKELAQVELEEIEARIPE---LEHNLRIALLPKDAAD 103

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILE+R   GG+EA LFA  +F  Y R+S++ GW+FEV+   ES++ G KE  A IS
Sbjct: 104 ERSAILEIRPAAGGDEAGLFAAQLFDAYRRFSEQNGWRFEVMEYAESEVAGLKEGMATIS 163

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV + ++DLRID YR
Sbjct: 164 GRSVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVTINDDDLRIDVYR 223

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+THIPTG+ +++Q+E+SQH N+AKA+K+L A+LYE +RS  H 
Sbjct: 224 ASGAGGQHVNKTESAVRITHIPTGVVVAMQEEKSQHKNRAKAMKILRARLYERQRSAAHE 283

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           SR+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE  D  IDAL  +
Sbjct: 284 SRAADRKSQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKIERIMAGE-FDEIIDALTRE 342

Query: 304 QEMDAIASFG 313
           ++ + +A+ G
Sbjct: 343 EQTELLAAEG 352


>gi|308805082|ref|XP_003079853.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
 gi|116058310|emb|CAL53499.1| COG0216: Protein chain release factor A (ISS) [Ostreococcus tauri]
          Length = 1134

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 165/300 (55%), Positives = 224/300 (74%), Gaps = 7/300 (2%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLK-SLLPKDD 61
           ++  LR +++ +D L       S++KD+ ++A EEL  AID +   Q   L+  LLP+DD
Sbjct: 591 MVKSLRDERESLDELA----RTSDEKDITELAREEL-RAIDAKLPEQEHALRIMLLPRDD 645

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
           AD+R  ILEVRAG GG+EA+LFA ++F+MY  +++K GW+FE + ++E+D +G +E SA 
Sbjct: 646 ADDRGAILEVRAGAGGDEAALFAAELFRMYALHARKSGWRFETLNMSETDGKGIREGSAE 705

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           + G GV+G+LKFESG+HRVQRVP TE  GRVHTS  SVA+LP A EVD+ +R+ED+RI+T
Sbjct: 706 VLGDGVFGRLKFESGVHRVQRVPETETQGRVHTSTASVAVLPHAAEVDMDIRDEDVRIET 765

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
            R+ G+GGQH NTTNSAVR+TH+PTG+T++IQDERSQH NKAKA  VL ++LY+MER ++
Sbjct: 766 MRASGAGGQHVNTTNSAVRLTHLPTGITVAIQDERSQHKNKAKAFSVLKSRLYDMEREKL 825

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRV-GITHHAISDMMEGENLDIFIDAL 300
              R++LRS  IG+GDRSE++RTYNFPQGRV DHRV G     I   M+G  LD  +D L
Sbjct: 826 ANERAELRSSLIGTGDRSEKVRTYNFPQGRVKDHRVDGNVSGDIKGFMDGFLLDDLVDKL 885


>gi|399064447|ref|ZP_10747386.1| peptide chain release factor 1 [Novosphingobium sp. AP12]
 gi|398030691|gb|EJL24096.1| peptide chain release factor 1 [Novosphingobium sp. AP12]
          Length = 356

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 150/286 (52%), Positives = 210/286 (73%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M  +A EE+     E    +  L  S+LP+D AD R  +LE+RAGTGG+EA+LFA D
Sbjct: 69  DPEMRALAAEEVQRLKTELPEAERRLAVSMLPRDAADVRPAMLEIRAGTGGDEAALFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +++MYERY+ ++GW+ E+V    SD+ G+KE  A ++G GV+ KLKFESG+HRVQRVP+T
Sbjct: 129 LYRMYERYAAEQGWRVEMVSANASDVGGFKEVVANVTGSGVFAKLKFESGVHRVQRVPVT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+  EVDV++ ++DL+ID YR+ G+GGQH NTT+SAVR+TH+PT
Sbjct: 189 ESGGRIHTSAATVAVLPEPTEVDVQIEDKDLKIDIYRASGAGGQHVNTTDSAVRITHLPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
            + +  QDERSQH NKAKA++VL A+LYE  R     + ++ R   +GSGDRSERIRTYN
Sbjct: 249 NLVVICQDERSQHKNKAKAMQVLRARLYEKMRDEAQGAEAEARKAMVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           FPQGRVTDHR+ +T H + +++EG  L   +D+L+ + E   +A+ 
Sbjct: 309 FPQGRVTDHRINLTLHRLPEILEGPGLAELVDSLIAEDEAKRLAAM 354


>gi|90420193|ref|ZP_01228101.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90335527|gb|EAS49277.1| peptide chain release factor 1 [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 359

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 157/314 (50%), Positives = 231/314 (73%), Gaps = 5/314 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++ +RT QK   E+   ++++ E +  +DM ++A  E+    ++ + L + +   LLPK
Sbjct: 45  VVAAIRTYQKAEQELAEARAILDEPAAGRDMRELAEIEIDELKEQLETLTAEIRILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  ILE+RAGTGG EA LFA D+F+MY+RY++   WK E++  +E ++ GY+E  
Sbjct: 105 DAADEKGAILEIRAGTGGSEAGLFAGDLFRMYQRYAEMNRWKVEIISASEGEVGGYREVI 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           AAI GVGV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++DV ++ ED+RI
Sbjct: 165 AAIRGVGVFSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDIDVEVKTEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+A+A++VL A+L++MER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRARAMQVLKARLFDMERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE +D  +DA
Sbjct: 284 RADDERSAARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGE-MDELVDA 342

Query: 300 LLLQQEMDAIASFG 313
           L+   +   +A+ G
Sbjct: 343 LIADHQAHLLAAVG 356


>gi|154246564|ref|YP_001417522.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
 gi|226739122|sp|A7IIM2.1|RF1_XANP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|154160649|gb|ABS67865.1| peptide chain release factor 1 [Xanthobacter autotrophicus Py2]
          Length = 360

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 155/302 (51%), Positives = 216/302 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  L+  +++++G   L+ E + D +M +MA  E+    D  + L + +  +LLPKD  D
Sbjct: 49  VRALKDAERDLEGANELLAESAADPEMREMAEAEVERLQDRIEALATAVRLALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILEVRAGTGG+EA+LFA D+++MY RY+ +KGW  E++  +E  + GYKE  AA+ 
Sbjct: 109 ERGIILEVRAGTGGDEAALFAGDLYRMYTRYAAEKGWSVEILSESEGTMGGYKEIVAALH 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A++VDV +   DLRID YR
Sbjct: 169 GRGAYARLKFESGVHRVQRVPATETSGRIHTSAATVAVLPEAEDVDVDINEADLRIDVYR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+TH+PT   +++QDERSQH NKA+A+ +L A+L + ER +   
Sbjct: 229 AQGAGGQHVNKTESAVRITHLPTNTVVAVQDERSQHRNKARAMALLRARLLDDERQKKEA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +++ G  LD  ID LL +
Sbjct: 289 GRAAERKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDEVIAGTALDEIIDPLLTE 348

Query: 304 QE 305
            +
Sbjct: 349 HQ 350


>gi|88606704|ref|YP_505023.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
 gi|119361507|sp|Q2GKS8.1|RF1_ANAPZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88597767|gb|ABD43237.1| peptide chain release factor 1 [Anaplasma phagocytophilum HZ]
          Length = 359

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 159/301 (52%), Positives = 220/301 (73%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           M LI + ++ QKEI  L+ L+   S D ++  +A +E  +      +L+  L  SLLPKD
Sbjct: 46  MSLIEKYKSTQKEIAELEELVNSASTDPELRSLAKDESHIKQKLLPKLRHELQLSLLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D R+ ILE+RAGTGGEEA+LF  ++++MY +Y+++K WK E + ++ + + GYKEAS 
Sbjct: 106 RDDSRNAILEIRAGTGGEEAALFVGNLYRMYLKYAERKNWKVETINISTTGIGGYKEASF 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           +I G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++  +DLRID
Sbjct: 166 SIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIPTG+ +  QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                SK+R  QIGSGDRSERIRTYNF Q R+TDHR+ +T + +  +M+  +LD FIDAL
Sbjct: 286 REEEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINLTSYRLDYVMKEGDLDEFIDAL 345

Query: 301 L 301
           +
Sbjct: 346 V 346


>gi|170746587|ref|YP_001752847.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
 gi|226739115|sp|B1M766.1|RF1_METRJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|170653109|gb|ACB22164.1| peptide chain release factor 1 [Methylobacterium radiotolerans JCM
           2831]
          Length = 361

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 221/310 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R   + + G+++LI E   D +M  +A EE   A+   +     L   LLPKD AD
Sbjct: 50  IRAYRAALENLAGVEALIDEPGTDPEMRALAAEEKPEALAALETAHRALQLLLLPKDAAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+MY +Y++ KGW+ EV+  +E  + G++E  A + 
Sbjct: 110 EKSAILEVRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGFREVVAEVK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ + + DL+IDT R
Sbjct: 170 GRGVFARLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDIHVNDADLKIDTMR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+PTG+ + +Q+ERSQH N+A+A+ +L A+LYE ER+    
Sbjct: 230 AQGAGGQHVNKTESAIRITHLPTGIVVFVQEERSQHKNRARAMALLRARLYEAERNAKDS 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++M G  LD  +DAL+ +
Sbjct: 290 ARAADRKAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGTALDEVVDALITE 349

Query: 304 QEMDAIASFG 313
            + + +A+ G
Sbjct: 350 HQAELLAAEG 359


>gi|319899228|ref|YP_004159321.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
 gi|319403192|emb|CBI76751.1| peptide chain release factor 1 [Bartonella clarridgeiae 73]
          Length = 357

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 160/299 (53%), Positives = 225/299 (75%), Gaps = 2/299 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           LI  L +  KEI  L+++I +   D +M ++A EEL     + ++L+  L   LLPKD A
Sbjct: 48  LIRALNSLCKEIAELETIISDTQTDTEMRNLAQEELSSLYQKVQQLEQELQILLLPKDIA 107

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DE+  I+E+RAGTGG EA+LFA ++F+MYERY+    WK EV+ +++ ++ GYKE  A I
Sbjct: 108 DEKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATI 167

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT 
Sbjct: 168 SGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTM 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +  
Sbjct: 228 RASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAE 286

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +L+  I+AL+
Sbjct: 287 SERSASRKTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEG-DLNELINALI 344


>gi|307942489|ref|ZP_07657838.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
 gi|307774310|gb|EFO33522.1| peptide chain release factor 1 [Roseibium sp. TrichSKD4]
          Length = 359

 Score =  330 bits (845), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 146/256 (57%), Positives = 203/256 (79%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD AD  D ILEVRAGTGG+EA+LFA D+F+MY+R+++  GWK EV+  +E ++ G+
Sbjct: 99  LLPKDSADANDAILEVRAGTGGDEAALFAGDLFRMYQRFAELNGWKVEVLSASEGEVGGF 158

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A++SG  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA++VD+ +   
Sbjct: 159 KEVIASVSGENVFARLKFESGVHRVQRVPATESGGRIHTSAATVAVLPQAEDVDIEINES 218

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRIDT+R+ G+GGQH NTT+SAVR+TH PTG+ +++QDERSQH NKA+A+++L A++Y+
Sbjct: 219 DLRIDTFRASGAGGQHVNTTDSAVRITHEPTGIVVAVQDERSQHKNKARAMQLLRARIYD 278

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            ER+R    R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T + +  ++ GE L  
Sbjct: 279 EERARAASERTEARRVQVGSGDRSERIRTYNFPQGRVTDHRIGLTLYKLEQIIAGEGLAE 338

Query: 296 FIDALLLQQEMDAIAS 311
            ++AL+L  +   +A+
Sbjct: 339 VVEALILDYQATLLAA 354


>gi|58038522|ref|YP_190486.1| peptide chain release factor 1 [Gluconobacter oxydans 621H]
 gi|81557234|sp|Q5FUR9.1|RF1_GLUOX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|58000936|gb|AAW59830.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Gluconobacter
           oxydans 621H]
          Length = 353

 Score =  330 bits (845), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 224/310 (72%), Gaps = 5/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   ++ +++  G ++L+    +D +M ++A  EL         LQ  L  +LLPKD AD
Sbjct: 48  IQAWKSAEEQKAGAQALL----DDPEMRELAQMELAEIEATLPDLQHALRLALLPKDAAD 103

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILE+R   GG+EA LFA ++F  Y R+S++ GW+FEV+   E+++ G KE  A IS
Sbjct: 104 ERSAILEIRPAAGGDEAGLFAAELFDAYRRFSEQNGWRFEVMEYAENEVAGLKEGMATIS 163

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV + ++DLRID YR
Sbjct: 164 GRSVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVTVNDDDLRIDVYR 223

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVRVTH+P+G+ +++Q+E+SQH NKAKA+K+L A+LYE ER+++H 
Sbjct: 224 ASGAGGQHVNKTESAVRVTHMPSGIVVAMQEEKSQHKNKAKAMKILRARLYERERAQLHA 283

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE  D  IDAL  +
Sbjct: 284 TRAADRKSQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKIDRIMGGE-FDEIIDALTRE 342

Query: 304 QEMDAIASFG 313
           ++ + +A+ G
Sbjct: 343 EQTELLAAEG 352


>gi|395778749|ref|ZP_10459261.1| peptide chain release factor 1 [Bartonella elizabethae Re6043vi]
 gi|423714937|ref|ZP_17689161.1| peptide chain release factor 1 [Bartonella elizabethae F9251]
 gi|395417957|gb|EJF84294.1| peptide chain release factor 1 [Bartonella elizabethae Re6043vi]
 gi|395430421|gb|EJF96463.1| peptide chain release factor 1 [Bartonella elizabethae F9251]
          Length = 358

 Score =  330 bits (845), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 224/310 (72%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L     EI  L+++I +   D +M  +A EEL     + + L+  L   LLPKD AD
Sbjct: 49  IRALNALYAEIRELETIINDKQTDIEMRHLAQEELPSLYKKVEHLEKELQILLLPKDVAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LF+ D+F+MYERY+    WK EV+ ++E ++ GYKE  A IS
Sbjct: 109 EKSAIVEIRAGTGGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLK+ESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R
Sbjct: 169 GKGVFSKLKYESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDINIRPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER ++  
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKVES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  I AL+  
Sbjct: 288 ERSASRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDELIHALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTTLLMEMD 356


>gi|319404588|emb|CBI78194.1| peptide chain release factor 1 [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 359

 Score =  329 bits (844), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 227/310 (73%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L +  KEI  L+++I +   D +M ++A EEL     + + L+  L   LLPKD AD
Sbjct: 49  IRTLNSLHKEIAELETIISDTQTDTEMRNLAQEELSSLSQKIQELEQELQILLLPKDIAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA ++F+MYERY+    WK E++ +++ ++ GYKE  A IS
Sbjct: 109 EKSVIIEIRAGTGGSEAALFAGNLFRMYERYANTHNWKVEIISLSDGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +L+  I+AL+  
Sbjct: 288 ERSASRKTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEG-DLNELINALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTTLLTEMD 356


>gi|386399803|ref|ZP_10084581.1| peptide chain release factor 1 [Bradyrhizobium sp. WSM1253]
 gi|385740429|gb|EIG60625.1| peptide chain release factor 1 [Bradyrhizobium sp. WSM1253]
          Length = 361

 Score =  329 bits (844), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 155/300 (51%), Positives = 217/300 (72%), Gaps = 6/300 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAIDEEKRLQSLLLKSLLPKD 60
           +   R+  KE+   ++LI + + D +M  MA    +EL   I++   L   +  +LLPKD
Sbjct: 49  VKTYRSAVKELADTEALIADPATDAEMRAMAEAERDELTPKIED---LVQKIRVALLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A
Sbjct: 106 AMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGSVGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            + G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA++P+ +EVDV +RN+DLRI+
Sbjct: 166 EVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVMPEVEEVDVEIRNDDLRIE 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+GG+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ E+ R
Sbjct: 226 TMRAGGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQR 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +  +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M GE L    DAL
Sbjct: 286 LDAARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVMAGEALGELTDAL 345


>gi|440228048|ref|YP_007335139.1| peptide chain release factor [Rhizobium tropici CIAT 899]
 gi|440039559|gb|AGB72593.1| peptide chain release factor [Rhizobium tropici CIAT 899]
          Length = 359

 Score =  329 bits (844), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 157/294 (53%), Positives = 216/294 (73%), Gaps = 2/294 (0%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEE 79
           ++ + S D++M D+A  EL    +  + L+  +   LLPKD ADE+  ILE+RAGTGG E
Sbjct: 65  MLSDKSVDREMRDLAEMELPEVKERIEALEKDIQVELLPKDAADEKSAILEIRAGTGGSE 124

Query: 80  ASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHR 139
           A+LFA D+F+MYER++   GWK EV+  ++ +  G+KE  A ISG GV+ +LKFESG+HR
Sbjct: 125 AALFAGDLFRMYERFAASNGWKVEVLSASDGEAGGFKEIIATISGKGVFSRLKFESGVHR 184

Query: 140 VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAV 199
           VQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT RS G+GGQH NTT+SAV
Sbjct: 185 VQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRSSGAGGQHVNTTDSAV 244

Query: 200 RVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRS 259
           R+TH+P+G+ ++   E+SQH N+AKA++VL ++L++MER R    RS  R  Q+GSGDRS
Sbjct: 245 RITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLFDMERQRADSERSADRKSQVGSGDRS 303

Query: 260 ERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           ERIRTYNFPQGRVTDHR+ +T + +  MM GE +D  +DALL   +   +A  G
Sbjct: 304 ERIRTYNFPQGRVTDHRINLTLYKLDRMMIGE-IDEVVDALLADYQASQLAQLG 356


>gi|365900753|ref|ZP_09438615.1| peptide chain release factor 1 [Bradyrhizobium sp. STM 3843]
 gi|365418514|emb|CCE11157.1| peptide chain release factor 1 [Bradyrhizobium sp. STM 3843]
          Length = 361

 Score =  329 bits (844), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 151/297 (50%), Positives = 214/297 (72%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R   KE+   ++LI + + D +M  MA  E    ++    L+  +  +LLPKD  D
Sbjct: 49  VKAYRAAVKELADAETLIADSATDAEMRTMAEAEREELVERRAELEQKIRLALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++NEDLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKNEDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ ER ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL
Sbjct: 289 ARSADRKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|299132853|ref|ZP_07026048.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
 gi|298592990|gb|EFI53190.1| peptide chain release factor 1 [Afipia sp. 1NLS2]
          Length = 358

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 152/302 (50%), Positives = 216/302 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R    EI  L+++I + + D DM  MA  E  + ++ ++ L+  +  +LLPKD  D
Sbjct: 47  VKAYRAGASEIADLEAMIADPATDADMRAMAESERPVLLERQESLEQQIRVALLPKDAMD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 107 ERNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVMSASEGTMGGYKEIVAEVQ 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A++VD+ +++ DLRI+T R
Sbjct: 167 GRGAFAKLKFESGVHRVQRVPDTEASGRIHTSAATVAVLPEAEDVDIDIKDSDLRIETMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++ + ER R   
Sbjct: 227 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRVLDGERQRAAA 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   +DAL  +
Sbjct: 287 ERSADRRGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTE 346

Query: 304 QE 305
            +
Sbjct: 347 HQ 348


>gi|398831037|ref|ZP_10589216.1| peptide chain release factor 1 [Phyllobacterium sp. YR531]
 gi|398212605|gb|EJM99207.1| peptide chain release factor 1 [Phyllobacterium sp. YR531]
          Length = 358

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 155/298 (52%), Positives = 222/298 (74%), Gaps = 2/298 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I +  + + E   L++++ + S D+DM ++A  EL    +  + L+  +   LLPKD AD
Sbjct: 48  IRDFLSARSEAADLQAMLDDVSTDRDMRELAEAELPEIEERIEVLEQDIQVLLLPKDVAD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ ILE+RAGTGG EA+LF  D+F+MYERY+   GW+ E++  ++ +  GYKE  A +S
Sbjct: 108 ERNAILEIRAGTGGSEAALFGGDLFRMYERYASANGWRVELISASDGEAGGYKEVIAMVS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R +D+RIDT R
Sbjct: 168 GRGVFAKLKFESGVHRVQRVPDTEASGRIHTSAATVAVLPEAEEIDIEIRPDDIRIDTMR 227

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH NTT+SAVR+THIP+G+ + +Q E+SQH N+A+A++VL ++L++M+R +   
Sbjct: 228 ASGSGGQHVNTTDSAVRITHIPSGIVV-VQAEKSQHQNRARAMQVLRSRLFDMQRQKADS 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD  I  L+
Sbjct: 287 ERSEARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEG-DLDELIGGLI 343


>gi|303326242|ref|ZP_07356685.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
 gi|345891915|ref|ZP_08842743.1| peptide chain release factor 1 [Desulfovibrio sp. 6_1_46AFAA]
 gi|302864158|gb|EFL87089.1| peptide chain release factor 1 [Desulfovibrio sp. 3_1_syn3]
 gi|345047775|gb|EGW51634.1| peptide chain release factor 1 [Desulfovibrio sp. 6_1_46AFAA]
          Length = 356

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 217/302 (71%), Gaps = 3/302 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           R  Q+E+   K L+++  ED D+ DMA EE+  A  E  R++  L  +LLP D  DE++ 
Sbjct: 52  RALQQEMAENKQLLHD--EDPDIRDMAHEEIRRAESELPRIEQALKVALLPTDPLDEKNT 109

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           ILE+RAGTGGEEA+LFA D+F+MY RY++ +GWK E++  + S+  GYKE    I+G  V
Sbjct: 110 ILEIRAGTGGEEAALFAADLFRMYTRYAELQGWKVEIMSESPSESGGYKEIICLIAGDRV 169

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y +LKFE+G HRVQRVP TE  GR+HTSA +VA++P+A+EVDV +R EDLRID YR+ G+
Sbjct: 170 YSRLKFEAGTHRVQRVPATETQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGA 229

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH N T SAVR+TH+PT   ++ QDERSQH NKA+A+KVL +++   ER R +   S 
Sbjct: 230 GGQHVNKTESAVRITHLPTNTVVTCQDERSQHKNKARAMKVLASRILAAERERQNSELSA 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R  Q+GSGDRSERIRTYNFPQGR TDHR+ +T +++  +MEGE   +F DAL    + +
Sbjct: 290 DRKAQVGSGDRSERIRTYNFPQGRCTDHRINLTLYSLDRIMEGELTPLF-DALSTAAQTE 348

Query: 308 AI 309
           A+
Sbjct: 349 AL 350


>gi|395789248|ref|ZP_10468771.1| peptide chain release factor 1 [Bartonella taylorii 8TBB]
 gi|395430295|gb|EJF96339.1| peptide chain release factor 1 [Bartonella taylorii 8TBB]
          Length = 359

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 165/311 (53%), Positives = 225/311 (72%), Gaps = 8/311 (2%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
            I  L     EI  L+++I +   D +M ++A EEL L   + ++L+  L   LLPKD A
Sbjct: 48  FIRTLNALHTEITELETMISDKLTDIEMRNLAQEELPLLYQKTEQLEQELQILLLPKDVA 107

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DE+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV + E ++ GYKE  A I
Sbjct: 108 DEKSAIIEIRAGTGGSEAALFAGDLFRMYERYAASHNWKVEVVSLNEGEVGGYKEIIATI 167

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT 
Sbjct: 168 SGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTM 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +  
Sbjct: 228 RASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAE 286

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL- 301
             RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  ++EG +LD  I AL+ 
Sbjct: 287 SERSASRKNQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRVLEG-DLDELIHALIS 345

Query: 302 -----LQQEMD 307
                L  EMD
Sbjct: 346 DHQTALLMEMD 356


>gi|383768854|ref|YP_005447917.1| peptide chain release factor 1 [Bradyrhizobium sp. S23321]
 gi|381356975|dbj|BAL73805.1| peptide chain release factor 1 [Bradyrhizobium sp. S23321]
          Length = 361

 Score =  329 bits (843), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 156/309 (50%), Positives = 222/309 (71%), Gaps = 6/309 (1%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           R+  KE+   ++LI + + D +M  MA    +EL   I+E   L   +  +LLPKD  D+
Sbjct: 53  RSAVKELADTEALIADPTTDAEMRSMAEAERDELHPKIEE---LVQKIRVALLPKDAMDD 109

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + G
Sbjct: 110 RNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIIAEVQG 169

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
            G + KLKFESG+HRVQRVP TE  GR+HTSA +VA++P+ +EVDV ++N+DLRI+T R+
Sbjct: 170 RGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVMPEVEEVDVEIKNDDLRIETMRA 229

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ E+ R+  +
Sbjct: 230 QGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDAA 289

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
           RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL  + 
Sbjct: 290 RSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEH 349

Query: 305 EMDAIASFG 313
           +   +A+ G
Sbjct: 350 QAAQLAAQG 358


>gi|148284270|ref|YP_001248360.1| peptide chain release factor 1 [Orientia tsutsugamushi str.
           Boryong]
 gi|166223581|sp|A5CCS8.1|RF1_ORITB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146739709|emb|CAM79522.1| peptide chain release factor [Orientia tsutsugamushi str. Boryong]
          Length = 359

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 153/310 (49%), Positives = 230/310 (74%), Gaps = 2/310 (0%)

Query: 3   LISELRTKQKEIDGLKSL--IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +I +L    K  + +K L  + +  +D ++  +A  EL   ++   +L+  +  SLLPK+
Sbjct: 44  IIEKLNRYLKAHENIKYLQQVIDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKE 103

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D ++ I+EVRAGTGG+EA+LFA  +F+MY +Y+++K WKFE++ ++++++ G KEASA
Sbjct: 104 SDDHKNAIIEVRAGTGGDEAALFAASLFQMYNKYAERKKWKFELLSISDTEIGGCKEASA 163

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG GV+  LKFESG+HRVQR+P TE +GR+HTSA +V +LP+A+EVDV++  +DL+ID
Sbjct: 164 LISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPEAEEVDVKIDAKDLKID 223

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYR+ G+GGQH NTT+SAVR+THIPTG+ +S QDE+SQH NKAKA+K+L A+LY++E+ +
Sbjct: 224 TYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQK 283

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
               ++  R  Q+G+GDRSERIRTYN+PQGRVTDHR+ +T + I ++++   LD  I+ L
Sbjct: 284 SKQEQAISRKVQVGTGDRSERIRTYNYPQGRVTDHRINLTLYKIEEIIQEGKLDEIINNL 343

Query: 301 LLQQEMDAIA 310
           + + E   IA
Sbjct: 344 ISENEAKKIA 353


>gi|297182948|gb|ADI19096.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0070_34A12]
          Length = 353

 Score =  328 bits (842), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 148/258 (57%), Positives = 203/258 (78%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLP+D  D R+ ILEVRAGTGG+EA+LFA D+F MY+R++ K GW+FEV+ V+E+ + GY
Sbjct: 95  LLPRDRDDSRNAILEVRAGTGGDEAALFASDLFGMYQRFAGKHGWRFEVMEVSETGIGGY 154

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KEA+A I+G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ ++  
Sbjct: 155 KEATANIAGSDVFARLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDVDIDVQES 214

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRID +R+ G GGQ  NTT+SAVR+THIPTG+ +S QDE+SQH N+AKA+K+L A+LY+
Sbjct: 215 DLRIDVFRASGPGGQSVNTTDSAVRITHIPTGIVVSQQDEKSQHKNRAKAMKILRARLYD 274

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            ER+R+   R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE LD 
Sbjct: 275 AERARLQAERAASRKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKVIAGEALDE 334

Query: 296 FIDALLLQQEMDAIASFG 313
            ++AL+ + +   +A  G
Sbjct: 335 VVEALVAEDQAQRLAEGG 352


>gi|357031644|ref|ZP_09093587.1| peptide chain release factor 1 [Gluconobacter morbifer G707]
 gi|356414874|gb|EHH68518.1| peptide chain release factor 1 [Gluconobacter morbifer G707]
          Length = 353

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 155/288 (53%), Positives = 211/288 (73%), Gaps = 1/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           ED +M ++A  EL        RLQ  L  +LLP+D ADER  ILEVR   GG+EA LFA 
Sbjct: 66  EDPEMRELAQAELDEVNASLPRLQHDLRLALLPRDAADERSAILEVRPAAGGDEAGLFAA 125

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F  Y R++++ GW+FEV+   E+++ G KE  A ISG  V+ +LK+ESG+HRVQRVP 
Sbjct: 126 ELFDAYRRFAEQNGWRFEVMEYAENEVAGLKEGMATISGRSVFARLKYESGVHRVQRVPA 185

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTS V+VA+LP+A+EVDV + ++DLRID YR+ G+GGQH N T SAVR+TH+P
Sbjct: 186 TESQGRIHTSTVTVAVLPEAEEVDVTINDDDLRIDVYRASGAGGQHVNKTESAVRITHLP 245

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +++Q+E+SQH N+AKA+K+L A+LYE +RS  H SR+  R  Q+G+GDRSERIRTY
Sbjct: 246 TGVVVAMQEEKSQHKNRAKAMKILRARLYERQRSAAHESRAADRKSQVGTGDRSERIRTY 305

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGRVTDHR+ +T + I  +M GE  D  IDAL  +++   +A+ G
Sbjct: 306 NFPQGRVTDHRINLTLYKIDRVMAGE-FDEIIDALTQEEQTALLAAEG 352


>gi|163867491|ref|YP_001608690.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
 gi|189039959|sp|A9IMM3.1|RF1_BART1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161017137|emb|CAK00695.1| peptide chain release factor 1 [Bartonella tribocorum CIP 105476]
          Length = 358

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 160/301 (53%), Positives = 223/301 (74%), Gaps = 8/301 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           EI  L+++I +   D +M  +A EEL     + ++L+  L   LLPKD ADE+  I+E+R
Sbjct: 58  EITELETIINDKQTDIEMRHLAQEELPSLHKKVEQLEKELQILLLPKDVADEKSAIVEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LF+ D+F+MYERY+    WK EV+ ++E ++ GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFSGDLFRMYERYAHAHHWKVEVISLSEGEVGGYKEIIATISGKGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           +ESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH 
Sbjct: 178 YESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIDIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER ++   RS  R  Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKVESERSASRKSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL------LQQEM 306
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +LD  I AL+      L  EM
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLDEIIHALISDHQTALLMEM 355

Query: 307 D 307
           D
Sbjct: 356 D 356


>gi|54288338|gb|AAV31626.1| predicted protein chain release factor A [uncultured alpha
           proteobacterium EBAC2C11]
          Length = 335

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 150/261 (57%), Positives = 197/261 (75%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEE 79
           ++ E  ED DML+M   E  L         S L   LLPKD  D R+ ILEVRAGTGG+E
Sbjct: 65  MVEEAGEDADMLEMVQAEAGLLKTRLPEAHSALQIMLLPKDKDDARNAILEVRAGTGGDE 124

Query: 80  ASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHR 139
           A+LFA ++F MY+R++ K GW FEV+ V+E+ + GYKEA+A ISG  V+ +LKFESG+HR
Sbjct: 125 AALFASNLFSMYQRFAAKHGWNFEVMEVSETGIGGYKEATATISGNDVFARLKFESGVHR 184

Query: 140 VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAV 199
           VQRVP TE  GR+HTSA +VA+LP+A++VD+R+   DLR+D +R+ G GGQ  NTT+SAV
Sbjct: 185 VQRVPETEAGGRIHTSAATVAVLPEAEDVDIRIDESDLRVDVFRASGPGGQSVNTTDSAV 244

Query: 200 RVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRS 259
           R+TH+PTG+ +S QDE+SQH N+AKA+K+L A++Y+ ER+R+   R+  R  Q+GSGDRS
Sbjct: 245 RITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARVEAQRAAERKGQVGSGDRS 304

Query: 260 ERIRTYNFPQGRVTDHRVGIT 280
           ERIRTYNFPQGRVTDHR+  T
Sbjct: 305 ERIRTYNFPQGRVTDHRINFT 325


>gi|209883257|ref|YP_002287114.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|337739650|ref|YP_004631378.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|386028668|ref|YP_005949443.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM4]
 gi|229470351|sp|B6JA06.1|RF1_OLICO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|209871453|gb|ACI91249.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
 gi|336093736|gb|AEI01562.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM4]
 gi|336097314|gb|AEI05137.1| peptide chain release factor 1 [Oligotropha carboxidovorans OM5]
          Length = 358

 Score =  328 bits (841), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 152/308 (49%), Positives = 218/308 (70%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R    E+  L ++I + + D +M  MA  E  +  + ++ L+  +  +LLPKD  D
Sbjct: 47  VKAYRAGASELSDLDAMIDDPTTDAEMRAMAESERPVLQERQENLEQQIRIALLPKDAMD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LEVRAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 107 ERNVVLEVRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIVAQVQ 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +++ DLRI+T R
Sbjct: 167 GRGAFAKLKFESGVHRVQRVPDTEASGRIHTSAATVAVLPEAEEIDIDIKDTDLRIETMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++ + ER R   
Sbjct: 227 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRILDAERQRAAS 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSER+RTYNFPQGRVTDHR+ +T + +  ++ GE L+  IDAL  +
Sbjct: 287 ERSADRRGQVGSGDRSERVRTYNFPQGRVTDHRINLTLYKLPQVIAGEALNELIDALTTE 346

Query: 304 QEMDAIAS 311
            +   +A+
Sbjct: 347 HQAALLAT 354


>gi|398826725|ref|ZP_10584962.1| peptide chain release factor 1 [Bradyrhizobium sp. YR681]
 gi|398220670|gb|EJN07113.1| peptide chain release factor 1 [Bradyrhizobium sp. YR681]
          Length = 361

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 151/297 (50%), Positives = 214/297 (72%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R+  KE+   ++LI + + D +M  MA  E      + + L   +  +LLPKD  D
Sbjct: 49  VKTYRSAVKELADTEALIADATTDAEMRSMAEAERAELTPKIEELVQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++N+DLRI+T R
Sbjct: 169 GRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVEIKNDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ E+ RI+ 
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRINA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L    DAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELTDAL 345


>gi|23012458|ref|ZP_00052537.1| COG0216: Protein chain release factor A [Magnetospirillum
           magnetotacticum MS-1]
          Length = 361

 Score =  328 bits (840), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 220/310 (70%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  +  + G+++LI E   D +M  +A EE   A +  ++    L   LLPKD AD
Sbjct: 50  IHAYRAAEANLAGIRALIDEPGGDPEMRALAAEEKPDAEEALEQAHRALQLMLLPKDAAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG+EA+LFA D+F+MY +Y++ KGW+ EV+  +E  + GY+E  A + 
Sbjct: 110 EKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV +   DL+IDT R
Sbjct: 170 GRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDVVINEADLKIDTMR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+PTG+ + +Q+ERSQH N+A+A+ +L A+L++ ERS    
Sbjct: 230 AQGAGGQHVNKTESAIRITHLPTGVVVFVQEERSQHKNRARAMALLRARLFDAERSAKDS 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++M G  LD  IDAL+ +
Sbjct: 290 ARAADRKAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTE 349

Query: 304 QEMDAIASFG 313
            + + +A+ G
Sbjct: 350 HQAELLAAEG 359


>gi|295688344|ref|YP_003592037.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
 gi|295430247|gb|ADG09419.1| peptide chain release factor 1 [Caulobacter segnis ATCC 21756]
          Length = 356

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 157/314 (50%), Positives = 227/314 (72%), Gaps = 7/314 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           +EL+   + ++ L  L  E +E      D +M DM  +E+    ++   L+  L   L P
Sbjct: 39  AELKPVAEAVERLAKLSAERAELDVMAADPEMADMVRDEMAELDEKLPVLERDLALMLAP 98

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD  +    ILEVRAGTGG+EA+LFA D+F+MY+RY+Q  GW+ E+  ++E ++ GYKE 
Sbjct: 99  KDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQLHGWRVEIDSISEGEMGGYKEI 158

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A+I+G GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++V++ ++  DLR
Sbjct: 159 VASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDVEIDIKESDLR 218

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDTYRS G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+K L A+LY+M+R
Sbjct: 219 IDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQR 277

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
             +  +RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +S +MEG+ LD  I+
Sbjct: 278 EALDSARSEARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLSRIMEGDALDDVIN 337

Query: 299 ALLLQQEMDAIASF 312
            L+ + + + +AS 
Sbjct: 338 PLIAEDQAERLASL 351


>gi|114704325|ref|ZP_01437233.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
 gi|114539110|gb|EAU42230.1| peptide chain release factor 1 [Fulvimarina pelagi HTCC2506]
          Length = 359

 Score =  327 bits (839), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 156/311 (50%), Positives = 226/311 (72%), Gaps = 2/311 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I E R  + E+   +SL+ +   D++M ++A  E+       + L+  +   LLPKD AD
Sbjct: 49  IREFRALETELADAESLLDDPESDREMRNLAGVEVDDLRSRREGLRGRIQILLLPKDSAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG EA LFA D+++MY+RY++   WK E++  +E ++ G+KE  AAI 
Sbjct: 109 EKGAILEIRAGTGGSEAGLFAGDLYRMYQRYAELNRWKVELLSASEGEVGGFKEVIAAIK 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+++D+ +RNED+RIDT R
Sbjct: 169 GNGVFSRLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDIDIDVRNEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+A+A++VL AKLY+MER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAQAMQVLKAKLYDMERQKYDD 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE ++  +DAL+  
Sbjct: 288 ERSAARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKVIEGE-MEELVDALVAD 346

Query: 304 QEMDAIASFGS 314
            +   +A+ G+
Sbjct: 347 HQAKLLAAVGA 357


>gi|357385917|ref|YP_004900641.1| peptide chain release factor 1 [Pelagibacterium halotolerans B2]
 gi|351594554|gb|AEQ52891.1| peptide chain release factor 1 [Pelagibacterium halotolerans B2]
          Length = 358

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 156/309 (50%), Positives = 224/309 (72%), Gaps = 3/309 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           + E R    ++ G + L    S D++M ++A EE+    ++ + L   +   LLPKD AD
Sbjct: 49  VREYRAALSDLAGAEELA--KSGDREMAELAYEEMGELKEKIEALSQEIRILLLPKDAAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+MY+RY++ +GWK  V+  +E D  GYKE  A +S
Sbjct: 107 EKSAILEVRAGTGGDEAALFAGDLFRMYQRYAEAQGWKVTVMEASEGDAGGYKEIIANVS 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLK+ESG+HRVQRVP TE SGR+HTSA +VA+LP+ +++D+ +RNED+RIDT R
Sbjct: 167 GAGVFAKLKYESGVHRVQRVPDTEASGRIHTSAATVAVLPEVEDIDIEIRNEDIRIDTMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+A A+KVL A+L++ ++ +   
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGIVVT-SAEKSQHQNRANAMKVLRARLFDEQQHKASS 285

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R++ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL+ +
Sbjct: 286 ERAESRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQIITGEALGEVIDALITE 345

Query: 304 QEMDAIASF 312
            +   +A+ 
Sbjct: 346 NQAAQLAAM 354


>gi|367465545|ref|YP_002516272.3| peptide chain release factor 1 [Caulobacter crescentus NA1000]
 gi|220963008|gb|ACL94364.1| bacterial peptide chain Release factor 1 (RF-1) [Caulobacter
           crescentus NA1000]
          Length = 335

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 231/315 (73%), Gaps = 9/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEE-KRLQSLLLKSLL 57
           +ELR   + ++ L  L  E +E      D +M +M  +E+  A+DE+   ++  L   L 
Sbjct: 18  AELRPVAEAVERLAKLSAERAELDVMASDPEMAEMVRDEIQ-ALDEKLPVMERELALMLA 76

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  +    ILEVRAGTGG+EA+LFA D+F+MY+RY+Q +GW+ E+  ++E ++ G+KE
Sbjct: 77  PKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKE 136

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A+I+G GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++V++ ++  DL
Sbjct: 137 IVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDL 196

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDTYRS G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+K L A+LY+M+
Sbjct: 197 RIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQ 255

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R  +  +RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + ++ +MEG+ LD  I
Sbjct: 256 REALDSARSEARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVI 315

Query: 298 DALLLQQEMDAIASF 312
           + L+ + + + +AS 
Sbjct: 316 NPLIAEDQAERLASL 330


>gi|218507716|ref|ZP_03505594.1| peptide chain release factor 1 [Rhizobium etli Brasil 5]
          Length = 282

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 151/258 (58%), Positives = 200/258 (77%), Gaps = 2/258 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD ADE+  ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+  +E +  GY
Sbjct: 24  LLPKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGY 83

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A I+G GV+ KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+E+D+ +R E
Sbjct: 84  KEIIATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPE 143

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D+RIDT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+AKA++VL ++LY+
Sbjct: 144 DIRIDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYD 202

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            ER R    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  MMEGE ++ 
Sbjct: 203 AERQRADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEE 261

Query: 296 FIDALLLQQEMDAIASFG 313
            +DAL+   +   +A  G
Sbjct: 262 VVDALMADYQASQLAQLG 279


>gi|22096040|sp|Q9A9V5.2|RF1_CAUCR RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 356

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 231/315 (73%), Gaps = 9/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEE-KRLQSLLLKSLL 57
           +ELR   + ++ L  L  E +E      D +M +M  +E+  A+DE+   ++  L   L 
Sbjct: 39  AELRPVAEAVERLAKLSAERAELDVMASDPEMAEMVRDEIQ-ALDEKLPVMERELALMLA 97

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  +    ILEVRAGTGG+EA+LFA D+F+MY+RY+Q +GW+ E+  ++E ++ G+KE
Sbjct: 98  PKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKE 157

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A+I+G GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++V++ ++  DL
Sbjct: 158 IVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDL 217

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDTYRS G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+K L A+LY+M+
Sbjct: 218 RIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQ 276

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R  +  +RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + ++ +MEG+ LD  I
Sbjct: 277 REALDSARSEARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVI 336

Query: 298 DALLLQQEMDAIASF 312
           + L+ + + + +AS 
Sbjct: 337 NPLIAEDQAERLASL 351


>gi|27375329|ref|NP_766858.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
 gi|32171530|sp|Q89XT9.1|RF1_BRAJA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27348465|dbj|BAC45483.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 110]
          Length = 361

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 156/301 (51%), Positives = 218/301 (72%), Gaps = 8/301 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDE-EKRLQSLLLK---SLLPK 59
           +   R+  KE+   ++LI + + D +M  MA  E     DE   R++ L+ K   +LLPK
Sbjct: 49  VKTYRSAVKELADTEALIADPATDAEMRGMAEAER----DELAPRIEDLVQKIRVALLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D  D+R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  
Sbjct: 105 DAMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A + G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++N+DLRI
Sbjct: 165 AEVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKNDDLRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           +T R+ G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER 
Sbjct: 225 ETMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQ 284

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R+  +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDA
Sbjct: 285 RVDAARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDA 344

Query: 300 L 300
           L
Sbjct: 345 L 345


>gi|395780955|ref|ZP_10461399.1| peptide chain release factor 1 [Bartonella washoensis 085-0475]
 gi|395416830|gb|EJF83192.1| peptide chain release factor 1 [Bartonella washoensis 085-0475]
          Length = 359

 Score =  327 bits (838), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 158/289 (54%), Positives = 220/289 (76%), Gaps = 2/289 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           +I GL+++I +   D +M ++A EEL     + ++L+  L   LLPKD ADE+  I+E+R
Sbjct: 58  DITGLETIISDKLTDVEMRNLAQEELPSLWQKIEQLEQELQILLLPKDVADEKSAIIEIR 117

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG EA+LFA D+F+MYERY+    WK EVV ++E ++ GYKE  A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYERYANTHNWKVEVVSLSEGEVGGYKEIIATISGKGVFSKLK 177

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           FESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH 
Sbjct: 178 FESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHV 237

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +    RS  R  Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAERERSASRKNQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +L+  I AL+
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLNELIHALI 344


>gi|423711001|ref|ZP_17685321.1| peptide chain release factor 1 [Bartonella washoensis Sb944nv]
 gi|395414915|gb|EJF81350.1| peptide chain release factor 1 [Bartonella washoensis Sb944nv]
          Length = 359

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 161/302 (53%), Positives = 226/302 (74%), Gaps = 5/302 (1%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++S +RT      +I  L+++I +   D +M ++A EEL L   + ++L+  L   LLPK
Sbjct: 45  IVSSIRTLNALYVDITELETIINDKLTDVEMRNLAQEELPLLWQKIEQLEQELQILLLPK 104

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D ADE+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV ++E ++ GYKE  
Sbjct: 105 DVADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEVVSLSEGEVGGYKEII 164

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A ISG GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATISGKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER 
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQ 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           +    RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EG +L+  I A
Sbjct: 284 QAERERSASRKNQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRILEG-DLNELIHA 342

Query: 300 LL 301
           L+
Sbjct: 343 LI 344


>gi|407775618|ref|ZP_11122911.1| peptide chain release factor 1 [Thalassospira profundimaris WP0211]
 gi|407281295|gb|EKF06858.1| peptide chain release factor 1 [Thalassospira profundimaris WP0211]
          Length = 360

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 152/296 (51%), Positives = 216/296 (72%), Gaps = 1/296 (0%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEE 79
           ++ +   D+DM +MA  E     D+    +  +   L+PKD AD ++ ILE+RAGTGGEE
Sbjct: 65  ILADPQSDRDMREMAEAEKYDIQDKLPEAERQMKLMLIPKDTADTKNAILEIRAGTGGEE 124

Query: 80  ASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHR 139
           A+LFA D+++MY+RY++ +GWKFE +  +E+DL G+KE    +SG  V+ +LKFESG+HR
Sbjct: 125 AALFAADLYRMYQRYAEGRGWKFEQMDASENDLGGFKEVIVNVSGTDVFARLKFESGVHR 184

Query: 140 VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAV 199
           VQRVP+TE  GR+HTSA +VA+LP+A+EVD+++  +DLRIDTYRS G+GGQH NTT+SAV
Sbjct: 185 VQRVPVTEGGGRIHTSAATVAVLPEAEEVDIKIDPKDLRIDTYRSQGAGGQHVNTTDSAV 244

Query: 200 RVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRS 259
           R+THIPTG+  + Q+ +SQH NK KA+K+L ++LY+ ER      R+  R  Q+GSGDRS
Sbjct: 245 RITHIPTGVVAASQEAKSQHKNKEKAMKMLMSRLYDQERESKDSERAADRKSQVGSGDRS 304

Query: 260 ERIRTYNFPQGRVTDHRVGITHHAISDMME-GENLDIFIDALLLQQEMDAIASFGS 314
           ERIRTYNFPQGRV+DHR+ +T + + D +  G  +D  IDAL+ +++   +A   S
Sbjct: 305 ERIRTYNFPQGRVSDHRINLTLYRLDDFIAGGPAVDEMIDALIAEEQAQKLAEIES 360


>gi|395764564|ref|ZP_10445190.1| peptide chain release factor 1 [Bartonella sp. DB5-6]
 gi|395414391|gb|EJF80834.1| peptide chain release factor 1 [Bartonella sp. DB5-6]
          Length = 359

 Score =  327 bits (837), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 164/310 (52%), Positives = 225/310 (72%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L     EI  L+++I +   D +M ++A EEL L   + ++L+  L   LLPKD AD
Sbjct: 49  IRTLNALHTEITELETIISDKLTDTEMRNLAQEELPLLYQKMEQLEQELQILLLPKDVAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EVV + E ++ GYKE  A IS
Sbjct: 109 EKSAIVEIRAGTGGSEAALFAGDLFRMYERYAASHNWKVEVVSLNEGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L++++R +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIKRQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  ++EG +LD  I AL+  
Sbjct: 288 ERSASRKNQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRVLEG-DLDEIIHALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTALLMEMD 356


>gi|338972237|ref|ZP_08627612.1| peptide chain release factor 1 [Bradyrhizobiaceae bacterium SG-6C]
 gi|414169115|ref|ZP_11424952.1| peptide chain release factor 1 [Afipia clevelandensis ATCC 49720]
 gi|338234401|gb|EGP09516.1| peptide chain release factor 1 [Bradyrhizobiaceae bacterium SG-6C]
 gi|410885874|gb|EKS33687.1| peptide chain release factor 1 [Afipia clevelandensis ATCC 49720]
          Length = 361

 Score =  327 bits (837), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 153/310 (49%), Positives = 215/310 (69%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R+   EI G+ +LI + + D +M  MA  E          L   +  +LLPKD  D
Sbjct: 49  VKAYRSAVDEIGGIDALIADAATDPEMRSMAESERPELEARRDELAQDIRIALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK +++  +E  + GYKE  A + 
Sbjct: 109 ERNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVDLISASEGTMGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV +++ DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDVAIKDTDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER R+  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRLDS 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ G+ L   +DAL  +
Sbjct: 289 ERSAERKGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALGELVDALTTE 348

Query: 304 QEMDAIASFG 313
            +   +A  G
Sbjct: 349 HQAKLLAEQG 358


>gi|16125109|ref|NP_419673.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
 gi|13422113|gb|AAK22841.1| peptide chain release factor 1 [Caulobacter crescentus CB15]
          Length = 385

 Score =  327 bits (837), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 231/315 (73%), Gaps = 9/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEE-KRLQSLLLKSLL 57
           +ELR   + ++ L  L  E +E      D +M +M  +E+  A+DE+   ++  L   L 
Sbjct: 68  AELRPVAEAVERLAKLSAERAELDVMASDPEMAEMVRDEIQ-ALDEKLPVMERELALMLA 126

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  +    ILEVRAGTGG+EA+LFA D+F+MY+RY+Q +GW+ E+  ++E ++ G+KE
Sbjct: 127 PKDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQTQGWRVEIDSISEGEMGGFKE 186

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A+I+G GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++V++ ++  DL
Sbjct: 187 IVASITGDGVFGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEIKESDL 246

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDTYRS G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+K L A+LY+M+
Sbjct: 247 RIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQ 305

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R  +  +RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + ++ +MEG+ LD  I
Sbjct: 306 REALDSARSEARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLARIMEGDALDDVI 365

Query: 298 DALLLQQEMDAIASF 312
           + L+ + + + +AS 
Sbjct: 366 NPLIAEDQAERLASL 380


>gi|148258772|ref|YP_001243357.1| peptide chain release factor 1 [Bradyrhizobium sp. BTAi1]
 gi|146410945|gb|ABQ39451.1| bacterial peptide chain release factor 1 (bRF-1) [Bradyrhizobium
           sp. BTAi1]
          Length = 361

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 152/297 (51%), Positives = 212/297 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R   KE+   ++LI + + D +M  MA  E    I     L+  +  +LLPKD  D
Sbjct: 49  VKAYRAGVKELADTEALIADPATDAEMRAMAEAERDELIARRGELEQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ +EVDV ++ +DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKQDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|197104299|ref|YP_002129676.1| peptide chain release factor 1 [Phenylobacterium zucineum HLK1]
 gi|196477719|gb|ACG77247.1| peptide chain release factor RF-1 [Phenylobacterium zucineum HLK1]
          Length = 377

 Score =  326 bits (836), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 153/305 (50%), Positives = 222/305 (72%), Gaps = 6/305 (1%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           R +Q E++ +       S D +M  +A +EL    +    L+  +   L PKD  +    
Sbjct: 74  RAEQPELEEMA-----ASGDAEMAALARDELEALKERLPELEREVALLLAPKDKDENASA 128

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           ILEVRAGTGG+EA+LFA D+F+MY+RY+Q +GW+ E+  ++E D  GYKE  A+I+G GV
Sbjct: 129 ILEVRAGTGGDEAALFAGDLFRMYQRYAQTRGWRVEIDSISEGDAGGYKEIIASITGEGV 188

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           +G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++V++ +R++D+RIDTYRS G+
Sbjct: 189 FGRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEVEDVEIEVRDQDIRIDTYRSSGA 248

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+KVL A+LYE +R  +  +R++
Sbjct: 249 GGQHVNKTDSAVRITHLPTGIVVT-SSEKSQHQNRARAMKVLKARLYEQQREALDSARAE 307

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + ++ +MEGE LD  I+ L+ + +  
Sbjct: 308 SRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLAKVMEGEALDDVIEPLIAEDQAA 367

Query: 308 AIASF 312
            +A+ 
Sbjct: 368 RLAAL 372


>gi|348679174|gb|EGZ18991.1| hypothetical protein PHYSODRAFT_301424 [Phytophthora sojae]
          Length = 325

 Score =  326 bits (836), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 156/307 (50%), Positives = 226/307 (73%), Gaps = 7/307 (2%)

Query: 4   ISELRTKQKEIDGLKSLI--YECSEDKDMLD---MATEELCLAIDEEKRLQSLLLKSLLP 58
           + EL+++Q  ++ L  +I   E S+D D ++   MA +E     +   RL+  +++ +LP
Sbjct: 11  VRELQSQQNAVEELDEMIAEQEGSDDPDAVELRQMAKDERRELQESIARLEGEVVRLMLP 70

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D+AD++  ILE+RAGTGG+EA LFA D+ KMY++ +  KGWKFE++ ++E+DL G KE 
Sbjct: 71  RDEADDKSSILEIRAGTGGDEACLFAADILKMYQKVALAKGWKFEIMSISETDLGGCKEC 130

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
             +++G G YG++KFESG+HRVQRVP+ +   RVHTSAVSV +LP+A+EV+V +  +DLR
Sbjct: 131 VCSLTGRGAYGRMKFESGVHRVQRVPVNDV--RVHTSAVSVVVLPEAEEVEVEIDPKDLR 188

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           ID YR+ G+GGQH NTT SAVR+THIPTG+  ++QDERSQH NKAKALK+L A++++  R
Sbjct: 189 IDVYRASGAGGQHVNTTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIR 248

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            +    R  +R+ Q+GSGDRSER+RTYNFPQ RV+DHRV +T   I  M+ GE LD  +D
Sbjct: 249 RKRDAERQTMRNSQVGSGDRSERVRTYNFPQSRVSDHRVNVTVFGIERMLNGELLDEIVD 308

Query: 299 ALLLQQE 305
           AL++ ++
Sbjct: 309 ALVVDEQ 315


>gi|424845384|ref|ZP_18269995.1| peptide chain release factor 1 [Jonquetella anthropi DSM 22815]
 gi|363986822|gb|EHM13652.1| peptide chain release factor 1 [Jonquetella anthropi DSM 22815]
          Length = 358

 Score =  326 bits (836), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 159/304 (52%), Positives = 219/304 (72%), Gaps = 7/304 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + L  E R  +  +   KSL  E SED +M ++A EE   A+   + +++ L + LLPKD
Sbjct: 47  VELWQEYRQVEAGLAEAKSL--EDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKD 104

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             DE+D I+E+RAGTGG+EASLFA D+++MY R+ +++GW+ E+V   E+++ GYKE   
Sbjct: 105 PNDEKDVIVEIRAGTGGDEASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVF 164

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            + G G Y KLKFESG+HRVQRVP TE SGR+HTSA +VA++PQA++V++ +R EDL ID
Sbjct: 165 QVKGAGAYSKLKFESGVHRVQRVPATEASGRIHTSAATVAVMPQAEDVEIEIRPEDLDID 224

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRS G+GGQH N T+SAVR+TH PTG+ ++ QDERSQ  N+AKA+ VL A+LY++E  +
Sbjct: 225 TYRSSGAGGQHVNMTDSAVRITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQK 284

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF--ID 298
                +  R   IGSGDRSERIRTYNFPQ RVTDHR+G+T + +  M++G   DI+  ID
Sbjct: 285 KQSEEASTRRGMIGSGDRSERIRTYNFPQNRVTDHRIGLTLYKLDYMLDG---DIYEMID 341

Query: 299 ALLL 302
           AL +
Sbjct: 342 ALTM 345


>gi|453331298|dbj|GAC86877.1| peptide chain release factor 1 [Gluconobacter thailandicus NBRC
           3255]
          Length = 353

 Score =  326 bits (835), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 220/310 (70%), Gaps = 5/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   +  +K+ +G ++L+     D +M ++A  EL         L+  L  +LLPKD AD
Sbjct: 48  IQAWQAAEKQREGARALLA----DPEMKELAQAELEDIEAHIPELEHNLRIALLPKDAAD 103

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILE+R   GG+EA LFA  +F  Y R+S++ GW+FEV+   E+++ G K+  A IS
Sbjct: 104 ERSAILEIRPAAGGDEAGLFAAQLFDAYRRFSEQNGWRFEVMEYAENEVAGLKDGMATIS 163

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV + ++DLRID YR
Sbjct: 164 GRSVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVTINDDDLRIDVYR 223

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+THIPTG+ +++Q+E+SQH N+AKA+K+L A+LYE +RS  H 
Sbjct: 224 ASGAGGQHVNKTESAVRITHIPTGVVVAMQEEKSQHKNRAKAMKILRARLYERQRSAAHE 283

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           SR+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE  D  IDAL  +
Sbjct: 284 SRAADRKSQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKIERIMAGE-FDEIIDALTRE 342

Query: 304 QEMDAIASFG 313
           ++ + +A+ G
Sbjct: 343 EQTELLAAEG 352


>gi|260655567|ref|ZP_05861055.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
 gi|260630015|gb|EEX48209.1| peptide chain release factor 1 [Jonquetella anthropi E3_33 E1]
          Length = 361

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 159/304 (52%), Positives = 219/304 (72%), Gaps = 7/304 (2%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + L  E R  +  +   KSL  E SED +M ++A EE   A+   + +++ L + LLPKD
Sbjct: 50  VELWQEYRQVEAGLAEAKSL--EDSEDAEMAELAKEEAASAVKRLEEIEAELHRQLLPKD 107

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             DE+D I+E+RAGTGG+EASLFA D+++MY R+ +++GW+ E+V   E+++ GYKE   
Sbjct: 108 PNDEKDVIVEIRAGTGGDEASLFAADLYRMYSRFVEREGWRSEIVEENETEVGGYKEIVF 167

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            + G G Y KLKFESG+HRVQRVP TE SGR+HTSA +VA++PQA++V++ +R EDL ID
Sbjct: 168 QVKGAGAYSKLKFESGVHRVQRVPATEASGRIHTSAATVAVMPQAEDVEIEIRPEDLDID 227

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYRS G+GGQH N T+SAVR+TH PTG+ ++ QDERSQ  N+AKA+ VL A+LY++E  +
Sbjct: 228 TYRSSGAGGQHVNMTDSAVRITHKPTGLVVTCQDERSQIKNRAKAMMVLRARLYDLELQK 287

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF--ID 298
                +  R   IGSGDRSERIRTYNFPQ RVTDHR+G+T + +  M++G   DI+  ID
Sbjct: 288 KQSEEASTRRGMIGSGDRSERIRTYNFPQNRVTDHRIGLTLYKLDYMLDG---DIYEMID 344

Query: 299 ALLL 302
           AL +
Sbjct: 345 ALTM 348


>gi|414343457|ref|YP_006984978.1| peptide chain release factor 1 [Gluconobacter oxydans H24]
 gi|411028792|gb|AFW02047.1| peptide chain release factor 1 [Gluconobacter oxydans H24]
          Length = 353

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 220/310 (70%), Gaps = 5/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   +  +K+ +G ++L+     D +M ++A  EL         L+  L  +LLPKD AD
Sbjct: 48  IQAWQAAEKQREGARALLA----DPEMKELAQAELEDIEAHIPELEHNLRIALLPKDAAD 103

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER  ILE+R   GG+EA LFA  +F  Y R+S++ GW+FEV+   E+++ G K+  A IS
Sbjct: 104 ERSAILEIRPAAGGDEAGLFAAQLFDAYRRFSEQNGWRFEVMEYAENEVAGLKDGMATIS 163

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV + ++DLRID YR
Sbjct: 164 GRSVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVTINDDDLRIDVYR 223

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+THIPTG+ +++Q+E+SQH N+AKA+K+L A+LYE +RS  H 
Sbjct: 224 ASGAGGQHVNKTESAVRITHIPTGVVVAMQEEKSQHKNRAKAMKILRARLYERQRSAAHE 283

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           SR+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE  D  IDAL  +
Sbjct: 284 SRAADRKSQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKIERIMAGE-FDEIIDALTRE 342

Query: 304 QEMDAIASFG 313
           ++ + +A+ G
Sbjct: 343 EQTELLAAEG 352


>gi|421596648|ref|ZP_16040424.1| peptide chain release factor 1 [Bradyrhizobium sp. CCGE-LA001]
 gi|404271243|gb|EJZ35147.1| peptide chain release factor 1 [Bradyrhizobium sp. CCGE-LA001]
          Length = 361

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 154/303 (50%), Positives = 218/303 (71%), Gaps = 6/303 (1%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAIDEEKRLQSLLLKSLL 57
           + L+   R+  KE+   ++LI + + D +M  MA    +EL   I+E   L   +  +LL
Sbjct: 46  IELVKAYRSAVKELADTEALIADPATDPEMRSMAEAERDELAPKIEE---LVQQIRVALL 102

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  D+R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE
Sbjct: 103 PKDAMDDRNVMLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKE 162

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A + G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++V+V ++ EDL
Sbjct: 163 IIAEVQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVEVDIKTEDL 222

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RI+T R+ G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ E
Sbjct: 223 RIETMRAQGAGGQHVNKTESAIRITHMPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAE 282

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R R+  +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   I
Sbjct: 283 RQRVDAARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELI 342

Query: 298 DAL 300
           DAL
Sbjct: 343 DAL 345


>gi|319406093|emb|CBI79723.1| peptide chain release factor 1 [Bartonella sp. AR 15-3]
          Length = 359

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 226/310 (72%), Gaps = 8/310 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I  L +  KEI  ++++I +   D +M ++A EEL     + + L+  L   LLPKD AD
Sbjct: 49  IRALNSLCKEITDIETIISDTQTDTEMRNLAQEELSSLYQKIQELEQELQILLLPKDIAD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  I+E+RAGTGG EA+LFA D+F+MYERY+    WK EV+ +++ ++ GYKE  A IS
Sbjct: 109 EKSVIIEIRAGTGGSEAALFAGDLFRMYERYANTHNWKVEVISLSDGEVGGYKEIIATIS 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ KLKFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+E+D+ +  ED+RIDT R
Sbjct: 169 GKGVFSKLKFESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEICPEDIRIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER +   
Sbjct: 229 ASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAES 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL-- 301
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +L+  I+AL+  
Sbjct: 288 ERSASRKTQVGSGDRSERIRTYNFPQGRVTDHRINMTLYKLDRIMEG-DLNELINALISD 346

Query: 302 ----LQQEMD 307
               L  EMD
Sbjct: 347 HQTTLLTEMD 356


>gi|325186400|emb|CCA20906.1| peptide chain release factor 1 putative [Albugo laibachii Nc14]
          Length = 397

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/308 (50%), Positives = 222/308 (72%), Gaps = 4/308 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECS--EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
           I +L++  + ID L  ++   S   DK+++ +A EEL  A ++   L+  L + LLP+D 
Sbjct: 83  IQKLQSTLQTIDELSEILASPSSQNDKELIQLAKEELQEAKEDAIALEKSLTRQLLPRDP 142

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
           AD+++CILE+RAGTGGEEA LFA D+ K+Y++ +  + W F+++ ++ +DL G KE    
Sbjct: 143 ADDKNCILEIRAGTGGEEACLFANDLLKLYQKIAIMRNWHFQILSISHTDLGGCKECVCT 202

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           I G GVYG+ KFESG+HRVQRVP+ +   RVHTSAVSV +LP+ +E+++ L  ++LRID 
Sbjct: 203 IQGRGVYGQTKFESGVHRVQRVPINDV--RVHTSAVSVVVLPEIEEIEMELNPKELRIDV 260

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YR+ GSGGQH NTT SAVR+THIPTG+  ++QDERSQH NKAKA+ +L A++Y+  R + 
Sbjct: 261 YRASGSGGQHVNTTESAVRITHIPTGIQAAVQDERSQHQNKAKAMSILRARVYDQMRDQR 320

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
              R +LRS QIGSGDRSERIRTYNFPQ RV+DHRV +T + I   + GE +D  +DAL+
Sbjct: 321 DSKRHQLRSLQIGSGDRSERIRTYNFPQSRVSDHRVNVTLYGIERFLNGELMDPLVDALV 380

Query: 302 LQQEMDAI 309
           L ++ + +
Sbjct: 381 LDEQNNML 388


>gi|402825861|ref|ZP_10875108.1| peptide chain release factor 1 [Sphingomonas sp. LH128]
 gi|402260601|gb|EJU10717.1| peptide chain release factor 1 [Sphingomonas sp. LH128]
          Length = 356

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 143/261 (54%), Positives = 201/261 (77%)

Query: 52  LLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESD 111
           L  ++LP+D AD R  +LE+RAGTGG+EA+LFA D+++MYE+Y+ ++GW+ E+V    SD
Sbjct: 94  LAIAMLPRDAADVRPAMLEIRAGTGGDEAALFAADLYRMYEKYAAEQGWRVEMVSANASD 153

Query: 112 LRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR 171
           + G+KE  A ++G GV+ KLKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+  EVDV 
Sbjct: 154 VGGFKEVVANVTGSGVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPTEVDVA 213

Query: 172 LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCA 231
           + ++DL+ID YR+ G+GGQH NTT+SAVR+TH+P+G+ ++ QDERSQH NKAKA++VL A
Sbjct: 214 IEDKDLKIDIYRASGAGGQHVNTTDSAVRITHLPSGIVVTCQDERSQHKNKAKAMQVLRA 273

Query: 232 KLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGE 291
           +LYE  R     + ++ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG 
Sbjct: 274 RLYEKMRDEAQGAEAEARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEVLEGP 333

Query: 292 NLDIFIDALLLQQEMDAIASF 312
            L   +DAL+ + E   +A+ 
Sbjct: 334 GLAELVDALIAEDEAKRLAAM 354


>gi|384213954|ref|YP_005605117.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 6]
 gi|354952850|dbj|BAL05529.1| peptide chain release factor 1 [Bradyrhizobium japonicum USDA 6]
          Length = 361

 Score =  326 bits (835), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 155/300 (51%), Positives = 215/300 (71%), Gaps = 6/300 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAIDEEKRLQSLLLKSLLPKD 60
           +   R+  KE+    +LI + + D +M  MA    +EL   I+E   L   +  +LLPKD
Sbjct: 49  VKAYRSAVKELADTAALIGDPATDAEMRGMAEAERDELTPKIEE---LVQKIRVALLPKD 105

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A
Sbjct: 106 AMDDRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIA 165

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++N+DLRI+
Sbjct: 166 EIQGRGAFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVEIKNDDLRIE 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T R+ G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER R
Sbjct: 226 TMRAQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQR 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +  +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L    DAL
Sbjct: 286 VDAARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELTDAL 345


>gi|239787352|emb|CAX83829.1| Peptide chain release factor RF-1 [uncultured bacterium]
          Length = 354

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/276 (56%), Positives = 207/276 (75%), Gaps = 2/276 (0%)

Query: 27  DKDMLDMATEEL-CLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           D  M  +A EEL  L +  E+  Q +L   LLPKD  DER  ILE+RAGTGG+EA LFA 
Sbjct: 67  DPGMRQLAEEELGALKLATEETWQ-MLRVLLLPKDVDDERSAILEIRAGTGGDEAGLFAA 125

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY+RY+   GW+F+V+G++E+ L   KEA   I G GV+ KLKFESG+HRVQRVP 
Sbjct: 126 DLMRMYQRYAAIHGWQFDVLGLSETGLGSVKEAQVGIVGKGVFAKLKFESGVHRVQRVPE 185

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE SGRVHTSA +VA+LP+ ++VD+ +++EDLRID  R+ G+GGQH NTT+SAVR+TH+P
Sbjct: 186 TESSGRVHTSAATVAVLPEVEDVDIEIKDEDLRIDICRASGAGGQHVNTTDSAVRLTHLP 245

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ ++ QDERSQH NKAKA+K++ A+LY++ +      R+  R  Q+GSGDRSERIRTY
Sbjct: 246 TGLVVAQQDERSQHKNKAKAMKIMRARLYDLRKREQDEVRAADRKSQVGSGDRSERIRTY 305

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           NFPQGRVTDHR+ +T + +  +M+GE LD  ID L+
Sbjct: 306 NFPQGRVTDHRINLTLYKLDQVMQGEALDELIDNLI 341


>gi|317486540|ref|ZP_07945363.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
 gi|345887299|ref|ZP_08838489.1| peptide chain release factor 1 [Bilophila sp. 4_1_30]
 gi|316922215|gb|EFV43478.1| peptide chain release factor 1 [Bilophila wadsworthia 3_1_6]
 gi|345041960|gb|EGW46078.1| peptide chain release factor 1 [Bilophila sp. 4_1_30]
          Length = 356

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 157/289 (54%), Positives = 212/289 (73%), Gaps = 1/289 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D D+ +MA EE+    ++   L+  L   LLP D  DE++ ILE+RAGTGGEEA+LF  D
Sbjct: 69  DPDIREMAHEEIKSIEEKLPELEHDLKVLLLPTDPLDEKNIILEIRAGTGGEEAALFGGD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++K GWK E++  +ESD  GYKE  A ISG  VY +LKFESG HRVQRVP T
Sbjct: 129 LFRMYCRYAEKMGWKVEIMSQSESDNGGYKEVIALISGDKVYSRLKFESGTHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VAI+P+A+EVD+ L+ EDLR D YRS G GGQ  NTT+SAVRVTHIPT
Sbjct: 189 ESQGRIHTSAATVAIMPEAEEVDLDLKPEDLRFDVYRSSGPGGQSVNTTDSAVRVTHIPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH NKAK LK+LC++L +M++   + + +  R  Q+G+GDRSERIRTYN
Sbjct: 249 GLVVCCQDEKSQHKNKAKGLKILCSRLLQMKQDEQNAALADQRRAQVGTGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           FPQGRVTDHR+ +T +++  ++EGE +   +DAL+   + +A+ +  S+
Sbjct: 309 FPQGRVTDHRINLTLYSLGKVLEGE-IQELVDALVTHAQTEALKAQASS 356


>gi|389876238|ref|YP_006369803.1| peptide chain release factor RF-1 [Tistrella mobilis KA081020-065]
 gi|388527022|gb|AFK52219.1| peptide chain release factor RF-1 [Tistrella mobilis KA081020-065]
          Length = 362

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 160/314 (50%), Positives = 221/314 (70%), Gaps = 12/314 (3%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEEL------CLAIDEEKRLQSLLLKSLLPKDD 61
           R   +E+   + +  + + D +M  +A EE       C A+D   R+       LLP+D+
Sbjct: 53  REVARELAEARVMAGDPAADAEMRALAEEECRSLEAECQALDRSVRVM------LLPRDE 106

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
           AD+R  ILE+RAGTGGEEA+LFA D+F+MY+RY+Q+ GW+  ++  TESDL G++E  A 
Sbjct: 107 ADDRSAILEIRAGTGGEEAALFAADLFRMYQRYAQEAGWRVSLLQATESDLGGFREVVAE 166

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           I G GVYG+LKFESG+HRVQRVP TE  GR+HTSA +VAILP+A+EVD+ +   DL+ID 
Sbjct: 167 IEGAGVYGRLKFESGVHRVQRVPETEAQGRIHTSAATVAILPEAEEVDIAIDPADLKIDV 226

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           +R+ G+GGQH NTT+SAVR+TH+PTG+ +  QDERSQH N+AKALK+L A+L+E  R   
Sbjct: 227 FRASGAGGQHVNTTDSAVRITHLPTGIVVVQQDERSQHKNRAKALKILRARLFEQARDAA 286

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             +R+  R   +GSGDRSERIRTYNFPQ RVTDHR+G+T + +  ++ GE L   I+AL+
Sbjct: 287 AEARAAERRGLVGSGDRSERIRTYNFPQNRVTDHRIGLTLYKLDKVVAGEALGELIEALV 346

Query: 302 LQQEMDAIASFGST 315
            + +   +A+   T
Sbjct: 347 TEDQAARLAALDET 360


>gi|328870409|gb|EGG18783.1| peptide chain release factor 1 [Dictyostelium fasciculatum]
          Length = 530

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 225/321 (70%), Gaps = 22/321 (6%)

Query: 5   SELRTKQKEIDGL-------KSLIYECSEDKDMLDMATE------------ELCLAIDEE 45
           SE++   KE+D L       K L+ +C E +++ +M +E            +L   +++ 
Sbjct: 197 SEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEVKDKEEKELMNQDLKEMVEQV 256

Query: 46  KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 105
           K  +  L+ SLLP D  DE + I+E+RAGTGG EA LFA+++  MYE Y+Q  GWKFEV+
Sbjct: 257 KDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEVL 316

Query: 106 GVTESDLRGYK---EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL 162
            +  +D  G K   +ASA+ISG GV+G LK ESG+HRVQR+P TE  GRVHTS V+VAIL
Sbjct: 317 EIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAIL 376

Query: 163 PQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNK 222
           P+  EVD+++R+ +LRID YRS G+GGQ  NTT+SAVR+TH+PTG  +++QDERSQ MN+
Sbjct: 377 PEPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLMNR 436

Query: 223 AKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH 282
           AKA+K+L A+LYE ERSR+H  RS  RS QIG   RSE+IRTYNFPQ RVTDHRV I+ +
Sbjct: 437 AKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEKIRTYNFPQDRVTDHRVNISTN 496

Query: 283 AISDMMEGENLDIFIDALLLQ 303
            I  +M GE+L+  I+ ++LQ
Sbjct: 497 NIESVMAGESLNDLIEEIILQ 517


>gi|330813117|ref|YP_004357356.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486212|gb|AEA80617.1| peptide chain release factor 1 [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 357

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 155/294 (52%), Positives = 213/294 (72%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           K+ + LK ++ +   D ++ +MA  +L     +E+  +  +   LLPKD+ADE++ I+E+
Sbjct: 56  KDKEDLKKILSDKDSDIEIREMAEHDLEEIKSKEQEYEKKVKVFLLPKDEADEKNAIVEI 115

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG EASLFA D+F MY++ S   GW+ EV+ V+ S+  GYKE    I+G  V+ KL
Sbjct: 116 RAGTGGLEASLFASDLFNMYQKVSSINGWRVEVLSVSASEAGGYKEIVFTITGKNVFSKL 175

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQRVP TE  GRVHTSA +VA+L +A+EVDV++   DLRID +RSGG GGQ 
Sbjct: 176 KFESGVHRVQRVPDTETQGRVHTSAATVAVLAEAEEVDVKIDENDLRIDVFRSGGPGGQS 235

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVR+THIPTG+ ++IQDE+SQH NKAKA+ +L ++LYE ER R+   RS  R  
Sbjct: 236 VNTTDSAVRITHIPTGVVVAIQDEKSQHKNKAKAMTILRSRLYEAERLRLENERSVARKS 295

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           QIG+GDRSERIRTYNFPQGRV+DHR+ +T H ++  + G++     DAL ++ +
Sbjct: 296 QIGTGDRSERIRTYNFPQGRVSDHRINLTLHKLTGFLAGDDFAEMSDALQIKHQ 349


>gi|152989856|ref|YP_001355578.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
 gi|166223578|sp|A6Q162.1|RF1_NITSB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151421717|dbj|BAF69221.1| peptide chain release factor 1 [Nitratiruptor sp. SB155-2]
          Length = 354

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 159/300 (53%), Positives = 217/300 (72%), Gaps = 5/300 (1%)

Query: 14  IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           I+  +SLI    ED+++ ++A EEL     ++++L+  +   L+ KD  DE+D  LE+RA
Sbjct: 59  IEENRSLI----EDEELGELAKEELKELEPKKEQLEEEIKVLLISKDPNDEKDIYLEIRA 114

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           GTGGEEA+LFA D+FK Y RY++KKGW+ E+V  +ESD  GYKE  A I G GVY +LK+
Sbjct: 115 GTGGEEAALFASDLFKAYARYAEKKGWRVEIVSSSESDSGGYKEIIAKIKGQGVYSRLKY 174

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 193
           E+G HRVQRVP TE  GR+HTSAV+VAI+P+ D+VDV +   DL+ID YRS G GGQ  N
Sbjct: 175 EAGTHRVQRVPETESQGRIHTSAVTVAIMPEVDDVDVEINPNDLKIDVYRSSGHGGQSVN 234

Query: 194 TTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQI 253
           TT+SAVR+THIPTG+ +++QDE+SQH NK KALK+L A+++E        + +K R EQ+
Sbjct: 235 TTDSAVRITHIPTGIVVAMQDEKSQHKNKEKALKILKARIFEKRMREQQEALAKDRKEQV 294

Query: 254 GSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           GSGDRSERIRTYNFPQ RVTDHR+G+T + + ++M+G +LD  I+ L+   +   I   G
Sbjct: 295 GSGDRSERIRTYNFPQNRVTDHRIGLTLYKLEEVMQG-DLDQIIEPLIAHYQAQKIQEAG 353


>gi|297181249|gb|ADI17443.1| protein chain release factor a [uncultured Rhodospirillales
           bacterium HF0070_31K06]
          Length = 357

 Score =  325 bits (832), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 148/284 (52%), Positives = 212/284 (74%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M ++A  E     D+   ++  L   LLPKD ADE+  ILE+RAGTGG+EA+LFA D
Sbjct: 71  DSEMKELAEAERQELRDQVPDIEESLRILLLPKDAADEKSAILEIRAGTGGDEAALFASD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY+RY++  GW+ E + ++E++L G KEA+ +I+G GV+ +LKFESG+HRVQRVP T
Sbjct: 131 LMRMYQRYAEMHGWRTEFLDLSETELGGVKEAALSIAGRGVFARLKFESGVHRVQRVPTT 190

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           +  GR+HTSA +VA+LP+A+EVD+++   DLR+DTYR+ G+GGQH N T+SA+R+TH+PT
Sbjct: 191 DSGGRIHTSAATVAVLPEAEEVDIQIDTSDLRVDTYRASGAGGQHVNKTDSAIRITHLPT 250

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH N+AKA+KVL A+LY+ ER  +   R+  R  Q+GSGDRSERIRTYN
Sbjct: 251 GIVVQCQDEKSQHKNRAKAMKVLRARLYDHERQTLDAERAADRKTQVGSGDRSERIRTYN 310

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           FPQGRVTDHR+ +T H +  ++ G+ LD  +D L+ + +   +A
Sbjct: 311 FPQGRVTDHRINLTLHKLDRILAGDELDEVVDLLIAEDQAARLA 354


>gi|393769853|ref|ZP_10358370.1| peptide chain release factor 1 [Methylobacterium sp. GXF4]
 gi|392724675|gb|EIZ82023.1| peptide chain release factor 1 [Methylobacterium sp. GXF4]
          Length = 361

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 151/297 (50%), Positives = 216/297 (72%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           L+++I E   D +M  +A +E   A +  +     L   LLPKD ADE+  ILEVRAGTG
Sbjct: 63  LEAMIDEPGTDPEMRALAADEKPEAQERLEETHRALQLMLLPKDAADEKSAILEVRAGTG 122

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G+EA+LFA D+F+MY +Y++ KGW+ EV+  +E  + G++E  A + G GV+ +LKFESG
Sbjct: 123 GDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGFREVVAEVKGKGVFARLKFESG 182

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
            HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ + + DL+IDT R+ G+GGQH N T 
Sbjct: 183 AHRVQRVPNTETQGRIHTSAATVAVLPEAEEVDIVVNDADLKIDTMRAQGAGGQHVNKTE 242

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SA+R+TH+PTG+ + +Q+ERSQH N+A+A+ +L A+LY+ ER+    +R+  R  Q+GSG
Sbjct: 243 SAIRITHLPTGIVVFVQEERSQHKNRARAMALLRARLYDAERTAKDSARAADRRAQVGSG 302

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           DRSERIRTYNFPQGRVTDHR+ +T + + ++M G  LD  +DAL+ + + + +AS G
Sbjct: 303 DRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGTALDEVVDALITEHQAELLASEG 359


>gi|431805626|ref|YP_007232527.1| peptide chain release factor 1 [Liberibacter crescens BT-1]
 gi|430799601|gb|AGA64272.1| Peptide chain release factor 1 [Liberibacter crescens BT-1]
          Length = 357

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/303 (52%), Positives = 224/303 (73%), Gaps = 2/303 (0%)

Query: 10  KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCIL 69
           K++E   L S++ + + D+++ ++   ELC    +++ L++ +   LLPKD  +E+  IL
Sbjct: 55  KKEEEKNLLSVLSDQNIDQELKELVEIELCEIEKQKEILENEIKYLLLPKDADNEKSSIL 114

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           E+R+GTGG EA+LF  D+F+MYERYS  + WK E++  +E D  GYKE  AAISG GV+ 
Sbjct: 115 EIRSGTGGLEAALFVGDLFRMYERYSSLRKWKVELLSASEGDAGGYKEIIAAISGQGVFS 174

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 189
           +LKFESG+HRVQRVP+TE SGRVHTSA +VA+LP+A +VD+ +  ED+RIDT RS G+GG
Sbjct: 175 RLKFESGVHRVQRVPMTEASGRVHTSAATVAVLPEAKDVDIDIAPEDIRIDTMRSSGAGG 234

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH NTT+SAVR+THIP+G+ ++   E+SQH N+ +A+KVL A+LY++ER R+   RS  R
Sbjct: 235 QHVNTTDSAVRITHIPSGIVVT-SSEKSQHQNRLQAMKVLRARLYDIERRRLESERSAKR 293

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
             Q+GSGDRSERIRTYNF QGRVTDHR+ +T + +  M+EG ++D  IDALL + + + +
Sbjct: 294 KAQVGSGDRSERIRTYNFSQGRVTDHRINLTLYKLDRMLEG-DIDEMIDALLAEHQAEIL 352

Query: 310 ASF 312
            S 
Sbjct: 353 VSL 355


>gi|374812548|ref|ZP_09716285.1| peptide chain release factor 1 [Treponema primitia ZAS-1]
          Length = 361

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/289 (54%), Positives = 217/289 (75%), Gaps = 10/289 (3%)

Query: 18  KSLIYECSEDKDMLDMATEEL----CLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           K+LI +  +D DM +MA EE         D E RL+ LL+    PKD  DE++ I+E+RA
Sbjct: 62  KTLIQD-EKDPDMREMAKEESRELETHLKDAEDRLKFLLI----PKDPLDEKNIIMEIRA 116

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           GTGG+EA+LFA D+++MY R+++ KGWKFE++   E++L G+KE   +ISG  VY  L++
Sbjct: 117 GTGGDEAALFASDLYRMYSRFAETKGWKFEIMSSNETELGGFKEIVFSISGNNVYENLRY 176

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 193
           ESG+HRVQRVP TE SGR+HTSAV+VA+LP+ADE ++ +R EDLRID  R+GG GGQ  N
Sbjct: 177 ESGVHRVQRVPATEASGRIHTSAVTVAVLPEADETEIDIRTEDLRIDVMRAGGPGGQCVN 236

Query: 194 TTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQI 253
           TT+SAVR+THIP+G+ +  QDE+SQ  NKAKA++VL A++YEME ++   SRS+ R  Q+
Sbjct: 237 TTDSAVRITHIPSGVVVQCQDEKSQIKNKAKAMRVLRARIYEMEEAKAAASRSEARKNQV 296

Query: 254 GSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           GSGDRSERIRTYNFPQ R+TDHR+ +T + +  +M+G+  ++F DAL L
Sbjct: 297 GSGDRSERIRTYNFPQNRLTDHRINLTLYKLDLIMQGDVEELF-DALKL 344


>gi|456358592|dbj|BAM93037.1| peptide chain release factor 1 [Agromonas oligotrophica S58]
          Length = 361

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 150/297 (50%), Positives = 213/297 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R+  KE+   ++LI + + D +M  MA  E    I     L+  +  +LLPKD  D
Sbjct: 49  VKAYRSGVKELADTEALIADAASDAEMRGMAEAERDELIARRGELEQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ +DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ E+ ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGEMIDAL 345


>gi|367472871|ref|ZP_09472444.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS 285]
 gi|365274841|emb|CCD84912.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS 285]
          Length = 361

 Score =  324 bits (830), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 151/297 (50%), Positives = 211/297 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R   KE+   ++LI +   D +M  MA  E    I     L+  +  +LLPKD  D
Sbjct: 49  VKAYRAGVKELADTEALIADPETDAEMRAMAETERDELIARRGELEQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVIAASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ +DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|297182760|gb|ADI18914.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0010_09O16]
          Length = 356

 Score =  324 bits (830), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 154/296 (52%), Positives = 220/296 (74%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           L+ ++ + + D++++ MA  EL     + ++ +  L   LLPKD+AD+++ I+E+RAGTG
Sbjct: 61  LEKILNDKNSDEELMKMAHTELSELNSQFEQNEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G EASLFA D+FKMYE+   KK W  E++ ++ SD  G KE  A+I G  +Y  LK+ESG
Sbjct: 121 GLEASLFAGDLFKMYEKVCNKKKWSLELISISRSDAGGLKEVIASIKGNNIYSTLKYESG 180

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
           +HRVQRVP TE  GRVHTSA +VA+LP+A+EVD+++   DLRID +R+GG GGQ  NTT+
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDLKINETDLRIDVFRAGGPGGQSVNTTD 240

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVR+TH+P+G+++S QDE+SQH NKAK +K+L A+LYE+ER+RI   RS  R  +IG+G
Sbjct: 241 SAVRITHLPSGLSVSQQDEKSQHKNKAKGMKILRARLYELERTRIDQERSADRKSKIGTG 300

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           DRSERIRTYNFPQGRVTDHR+ +T H + + +EGE  D  I++L L+ + ++++  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEEFLEGEAFDEIIESLSLKAQEESLSKL 356


>gi|167842463|gb|ACA03159.1| RF1 [Dictyostelium fasciculatum]
          Length = 515

 Score =  324 bits (830), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 166/321 (51%), Positives = 225/321 (70%), Gaps = 22/321 (6%)

Query: 5   SELRTKQKEIDGL-------KSLIYECSEDKDMLDMATE------------ELCLAIDEE 45
           SE++   KE+D L       K L+ +C E +++ +M +E            +L   +++ 
Sbjct: 182 SEIKKVSKELDELREQVNSWKVLLVKCQELRELEEMVSEVKDKEEKELMNQDLKEMVEQV 241

Query: 46  KRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVV 105
           K  +  L+ SLLP D  DE + I+E+RAGTGG EA LFA+++  MYE Y+Q  GWKFEV+
Sbjct: 242 KDSERALVMSLLPSDKDDEGNAIMEIRAGTGGSEAQLFALEMLGMYEGYAQTMGWKFEVL 301

Query: 106 GVTESDLRGYK---EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL 162
            +  +D  G K   +ASA+ISG GV+G LK ESG+HRVQR+P TE  GRVHTS V+VAIL
Sbjct: 302 EIGWTDAVGNKACRDASASISGRGVFGFLKNESGVHRVQRIPETETMGRVHTSTVTVAIL 361

Query: 163 PQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNK 222
           P+  EVD+++R+ +LRID YRS G+GGQ  NTT+SAVR+TH+PTG  +++QDERSQ MN+
Sbjct: 362 PEPKEVDIKIRDSELRIDVYRSSGNGGQSVNTTDSAVRITHLPTGTVVAMQDERSQLMNR 421

Query: 223 AKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH 282
           AKA+K+L A+LYE ERSR+H  RS  RS QIG   RSE+IRTYNFPQ RVTDHRV I+ +
Sbjct: 422 AKAMKILRARLYEAERSRLHNERSSHRSSQIGDASRSEKIRTYNFPQDRVTDHRVNISTN 481

Query: 283 AISDMMEGENLDIFIDALLLQ 303
            I  +M GE+L+  I+ ++LQ
Sbjct: 482 NIESVMAGESLNDLIEEIILQ 502


>gi|421849077|ref|ZP_16282061.1| translation peptide chain release factor 1 [Acetobacter
           pasteurianus NBRC 101655]
 gi|371460101|dbj|GAB27264.1| translation peptide chain release factor 1 [Acetobacter
           pasteurianus NBRC 101655]
          Length = 352

 Score =  323 bits (829), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 153/287 (53%), Positives = 211/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M ++A  EL    ++  +LQ  +  SLLPKD AD R  ILEVR   GG+EA LFA +
Sbjct: 66  DPEMKELAEAELADLREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGGDEAGLFAAE 125

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F MY RY+   GW+F V+   ES+L G +E  A I+G GV+ +LK+ESG+HRVQRVP T
Sbjct: 126 LFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGVHRVQRVPAT 185

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS V+VA+LP+A+EVDV +   DLR+D +R+ G+GGQH N T SAVR+TH+P+
Sbjct: 186 ESQGRIHTSTVTVAVLPEAEEVDVEVNETDLRVDVFRASGAGGQHVNKTESAVRLTHMPS 245

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +S+Q+E+SQH N+AKA+K+L A+LYE ER++ H +R+  R  Q+G+GDRSERIRTYN
Sbjct: 246 GIVVSMQEEKSQHKNRAKAMKILRARLYERERAQAHANRAADRRSQVGTGDRSERIRTYN 305

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+ +T + I  +M GE LD F+DAL  +++   +A+ G
Sbjct: 306 FPQGRVTDHRINLTLYKIDRVMLGE-LDEFVDALTQEEQAALLAAEG 351


>gi|254796771|ref|YP_003081607.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
 gi|254590013|gb|ACT69375.1| peptide chain release factor 1 [Neorickettsia risticii str.
           Illinois]
          Length = 367

 Score =  323 bits (829), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 227/310 (73%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + LI+  +  ++E   L+ L+    ED+++ ++   +L    D   +L+  + + LLPKD
Sbjct: 47  VELITRYKKLKEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVVPKLEFEIRRMLLPKD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D  + +LEVRAGTGG+EA+LFA  +F MY++Y+++  W+FE++ ++ +++ GYKEA+A
Sbjct: 107 KDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANA 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           +ISG  V+ KLKFESG+HRVQRVP TE +GR+HTS  +VA+LP+ ++VDV++ ++DLRID
Sbjct: 167 SISGSEVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEPEDVDVKINDKDLRID 226

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVRVTHIPTG+ +  QDE+SQH N+AKA+KVL  +LYE+ER++
Sbjct: 227 VYRSSGPGGQSVNTTDSAVRVTHIPTGIVVIQQDEKSQHKNRAKAMKVLKVRLYEIERNK 286

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +    S +R  QIGSG+RSE+ RTYNFPQGR+TDHR+ +T + I++ ++   L+  I+AL
Sbjct: 287 VQQEISSMRKSQIGSGERSEKTRTYNFPQGRITDHRINLTTYRINETVKEGELEPIIEAL 346

Query: 301 LLQQEMDAIA 310
           + + E   +A
Sbjct: 347 IRENEARMLA 356


>gi|296445919|ref|ZP_06887870.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
 gi|296256587|gb|EFH03663.1| peptide chain release factor 1 [Methylosinus trichosporium OB3b]
          Length = 356

 Score =  323 bits (829), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 158/297 (53%), Positives = 214/297 (72%), Gaps = 1/297 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R    EI GL  ++ + + + +M      EL  A       +  L  +LLPKD AD
Sbjct: 47  IRTWRATSAEIAGLGEMLADPALEPEMRAFVEGELDAAESALASAEQELKLALLPKDSAD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILEVRAGTGG+EA+LFA D+F+ Y++Y+  KGW  E++  +E  L GYKE  A IS
Sbjct: 107 EKGVILEVRAGTGGDEAALFAGDLFRAYQKYAGVKGWGVEILSASEGALGGYKEIVAEIS 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GVY +LKFESG+HRVQRVP TE  GR+HTSA +VA+LPQA+EVDV + ++DL+I+T R
Sbjct: 167 GRGVYARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPQAEEVDVAIDDKDLQIETMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           SGG+GGQH N T SA+R+TH+P+G+ + +Q+ERSQH N+AKA++VL ++L++ ER R+  
Sbjct: 227 SGGAGGQHVNKTESAIRITHLPSGIVVMMQEERSQHRNRAKAMEVLRSRLFDAERQRLDS 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++EGE LD   DAL
Sbjct: 287 ARAADRKAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGE-LDEIFDAL 342


>gi|297183691|gb|ADI19816.1| protein chain release factor a [uncultured alpha proteobacterium
           EB000_37G09]
          Length = 357

 Score =  323 bits (829), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 153/283 (54%), Positives = 207/283 (73%)

Query: 18  KSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGG 77
           + +I E   D +M +MA  E+     +    +  L   LLPKD  D R+ ILEVRAGTGG
Sbjct: 63  RQMIEEEGADPEMAEMAETEISELGPQLTEAEHDLKLLLLPKDTDDSRNAILEVRAGTGG 122

Query: 78  EEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGI 137
           +EA+LFA D+F MY+R + + GWKFEV+ ++E+ + GYKEA+A ISG  V+ +LKFESG+
Sbjct: 123 DEAALFAADLFGMYQRTASRYGWKFEVMEISETGIGGYKEATANISGQDVFARLKFESGV 182

Query: 138 HRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNS 197
           HRVQRVP TE  GR+HTSA +VA+LP+A +VD+ +   DLR+D +R+ G GGQ  NTT+S
Sbjct: 183 HRVQRVPETETGGRIHTSAATVAVLPEAQDVDIEVSESDLRVDVFRASGPGGQSVNTTDS 242

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+TH+PTG+ +S QDE+SQH N+AKA+K+L A++Y+ ER+R    R+  R  Q+GSGD
Sbjct: 243 AVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRARIYDAERARQQAERAASRKGQVGSGD 302

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           RSERIRTYNFPQGRVTDHR+  T + +  ++ GE +D  IDAL
Sbjct: 303 RSERIRTYNFPQGRVTDHRINFTLYKLDKVLAGEAIDEVIDAL 345


>gi|365879438|ref|ZP_09418861.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS 375]
 gi|365292622|emb|CCD91392.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS 375]
          Length = 361

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 150/297 (50%), Positives = 211/297 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R   KE+   ++LI +   D +M  MA  E    +     L+  +  +LLPKD  D
Sbjct: 49  VKAYRAGVKELADTEALIADPDTDAEMRAMAEAERDELVARRGELEQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ +DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|339018166|ref|ZP_08644307.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           tropicalis NBRC 101654]
 gi|338752725|dbj|GAA07611.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           tropicalis NBRC 101654]
          Length = 352

 Score =  323 bits (828), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 146/259 (56%), Positives = 201/259 (77%), Gaps = 1/259 (0%)

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           ++LP+D ADER  ILEVR   GG+EA+LFA ++F +Y RY+  +GW+F ++   ES+L G
Sbjct: 94  AMLPRDAADERSAILEVRPAAGGDEAALFAAELFDLYRRYADLRGWRFSIMDYDESELGG 153

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
            +E  A ISG GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV +  
Sbjct: 154 LREGIAEISGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVTVDE 213

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
            DLRID YR+ G+GGQH N T SAVR+TH+PTG+ +++Q+E+SQH N+AKA+K+L A+LY
Sbjct: 214 GDLRIDVYRASGAGGQHVNKTESAVRITHLPTGIVVAMQEEKSQHKNRAKAMKILRARLY 273

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           E ER+ +H SR+  R  Q+G+GDRSERIRTYNFPQGRVTDHRV +T + I  +M GE +D
Sbjct: 274 ERERAEVHASRAANRKSQVGTGDRSERIRTYNFPQGRVTDHRVNLTLYKIDRIMLGE-ID 332

Query: 295 IFIDALLLQQEMDAIASFG 313
            F+DAL  +++ + +A+ G
Sbjct: 333 DFVDALTQEEQAELLAAEG 351


>gi|408374426|ref|ZP_11172113.1| peptide chain release factor 1 [Alcanivorax hongdengensis A-11-3]
 gi|407765701|gb|EKF74151.1| peptide chain release factor 1 [Alcanivorax hongdengensis A-11-3]
          Length = 361

 Score =  323 bits (828), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 159/291 (54%), Positives = 214/291 (73%), Gaps = 8/291 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
           D DM +M  EE   A + E R+  L   L K +LP+D  D  +  LEVRAGTGG+EA+LF
Sbjct: 73  DPDMREMGHEE---AREAEARMAELGDELQKLMLPRDPRDGANVFLEVRAGTGGDEAALF 129

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+F+MY RY+ + GWK E+V  +E +  GYKE  A + G GVY +LKFESG HRVQRV
Sbjct: 130 AGDLFRMYSRYADRMGWKVELVSASEGEHGGYKEVIARVIGDGVYSRLKFESGAHRVQRV 189

Query: 144 PLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GR+HTSA +VAI+ +A+++ D+++RNEDLRIDTYRS G+GGQH NTT+SAVR+T
Sbjct: 190 PATESQGRIHTSACTVAIMAEAEDLGDIQIRNEDLRIDTYRSSGAGGQHVNTTDSAVRIT 249

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ +  QDERSQH NKAKA+ +L A+LY+ +++  H  ++  R   +GSGDRSERI
Sbjct: 250 HLPTGVVVECQDERSQHKNKAKAMSLLSARLYDAQQNAAHAEQAAERKSLVGSGDRSERI 309

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYNFPQGRVTDHR+ +T + + ++MEG +LD  + ALL + + D +A+ G
Sbjct: 310 RTYNFPQGRVTDHRINLTLYRLGEVMEG-DLDEVLGALLAEYQADQLAALG 359


>gi|374294759|ref|YP_005044950.1| peptide chain release factor 1 (bRF-1) [Clostridium clariflavum DSM
           19732]
 gi|359824253|gb|AEV67026.1| bacterial peptide chain release factor 1 (bRF-1) [Clostridium
           clariflavum DSM 19732]
          Length = 360

 Score =  323 bits (828), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 158/317 (49%), Positives = 222/317 (70%), Gaps = 7/317 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLL 57
           + EL  K  E   L   I E  E      DKD  DM   EL  A +  +R++  +   LL
Sbjct: 41  LQELVNKYGEYKKLTKDIAEAKELLNEKLDKDFRDMVELELKEAEESLERIKKEIKILLL 100

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE++ I+E+R G GG+EASLFA D+F+MY +Y++K GWK E++    +++ G+KE
Sbjct: 101 PKDPNDEKNVIVEIRGGAGGDEASLFAGDLFRMYTKYAEKCGWKTEILDSNPNEIGGFKE 160

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
              AI G G Y KLKFESG+HRVQR+P TE +GR+HTS V+VA+LP+ +EVDV +   DL
Sbjct: 161 VIFAIEGNGAYSKLKFESGVHRVQRIPETEANGRIHTSTVTVAVLPEVEEVDVEINPNDL 220

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           +IDT+R+ G+GGQH N T SA+R+THIPTG+ ++ QD+RSQH NK KA+++L +KLYEM 
Sbjct: 221 KIDTFRASGAGGQHINKTESAIRITHIPTGIVVTCQDQRSQHKNKDKAMRILRSKLYEMA 280

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           + + +   ++ R  Q+G+GDRSERIRTYN+PQGRVTDHR+G+T + I  ++EG +LD  I
Sbjct: 281 QEQQNSEIAQARKTQVGTGDRSERIRTYNYPQGRVTDHRIGLTLYKIDSILEG-DLDEII 339

Query: 298 DALLLQQEMDAIASFGS 314
           DAL+   + + +AS G+
Sbjct: 340 DALITTSQAERLASGGN 356


>gi|329113396|ref|ZP_08242177.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
 gi|326697221|gb|EGE48881.1| Peptide chain release factor 1 [Acetobacter pomorum DM001]
          Length = 352

 Score =  323 bits (828), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 152/287 (52%), Positives = 212/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M ++A  EL    ++  +LQ  +  SLLPKD AD R  ILEVR   GG+EA+LFA +
Sbjct: 66  DPEMKELAEAELTELREQLPQLQKDVRLSLLPKDVADARSAILEVRPAAGGDEAALFAAE 125

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F MY RY+   GW+F V+   ES+L G +E  A I+G GV+ +LK+ESG+HRVQRVP T
Sbjct: 126 LFDMYRRYADLNGWRFTVMDYDESELGGLREGIAEINGKGVFARLKYESGVHRVQRVPAT 185

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS V+VA+LP+A++VDV +   DLR+D +R+ G+GGQH N T SAVR+TH+P+
Sbjct: 186 ESQGRIHTSTVTVAVLPEAEDVDVEVNETDLRVDVFRASGAGGQHVNKTESAVRLTHMPS 245

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +S+Q+E+SQH N+AKA+K+L A+LYE ER++ H +R+  R  Q+G+GDRSERIRTYN
Sbjct: 246 GIVVSMQEEKSQHKNRAKAMKILRARLYERERAQAHANRAADRRSQVGTGDRSERIRTYN 305

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+ +T + I  +M GE LD F+DAL  +++   +A+ G
Sbjct: 306 FPQGRVTDHRINLTLYKIDRVMLGE-LDEFVDALTQEEQAALLAAEG 351


>gi|91762346|ref|ZP_01264311.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|91718148|gb|EAS84798.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 357

 Score =  323 bits (828), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 154/297 (51%), Positives = 220/297 (74%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           L+ ++ + + D +  +MA  EL     E + ++  L   LLPKD+AD+++ I+E+RAGTG
Sbjct: 61  LEKILSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G EASLFA D+FKMYE+ S +K W+ E++ +++S+  G KE  A+I G  +Y  LK+ESG
Sbjct: 121 GLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESG 180

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
           +HRVQRVP TE  GRVHTSA +VA+LP+A+EVD+++ + DLRID +R+GG GGQ  NTT+
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTD 240

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVR+THIPTG+++S QD++SQH NKAK + +L ++LYE+ERSRI   RS+ R  +IG+G
Sbjct: 241 SAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTG 300

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           DRSERIRTYNFPQGRVTDHR+ +T H +   +EGE  D  ++ L LQ + + +++  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEAFLEGEAFDEMVENLTLQAQEEKLSNLN 357


>gi|71083224|ref|YP_265943.1| protein release factor class I [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|119361574|sp|Q4FN99.1|RF1_PELUB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71062337|gb|AAZ21340.1| protein release factor Class I (RF-1) [Candidatus Pelagibacter
           ubique HTCC1062]
          Length = 357

 Score =  323 bits (828), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 154/297 (51%), Positives = 220/297 (74%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           L+ ++ + + D +  +MA  EL     E + ++  L   LLPKD+AD+++ I+E+RAGTG
Sbjct: 61  LEKILSDSNSDNEFKEMAEVELKDLKLENETIEKKLKLFLLPKDEADKKNAIIEIRAGTG 120

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G EASLFA D+FKMYE+ S +K W+ E++ +++S+  G KE  A+I G  +Y  LK+ESG
Sbjct: 121 GLEASLFAADLFKMYEKVSHQKKWELELISMSQSEAGGLKEVIASIRGKNIYSTLKYESG 180

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
           +HRVQRVP TE  GRVHTSA +VA+LP+A+EVD+++ + DLRID +R+GG GGQ  NTT+
Sbjct: 181 VHRVQRVPDTETQGRVHTSAATVAVLPEAEEVDIKINDSDLRIDVFRAGGPGGQSVNTTD 240

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVR+THIPTG+++S QD++SQH NKAK + +L ++LYE+ERSRI   RS+ R  +IG+G
Sbjct: 241 SAVRITHIPTGLSVSQQDQKSQHKNKAKGMLILRSRLYELERSRIEGERSEDRKSKIGTG 300

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           DRSERIRTYNFPQGRVTDHR+ +T H +   +EGE  D  ++ L LQ + + +++  
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEAFLEGEAFDEMVENLTLQAQEEKLSNLN 357


>gi|402820806|ref|ZP_10870370.1| hypothetical protein IMCC14465_16040 [alpha proteobacterium
           IMCC14465]
 gi|402510452|gb|EJW20717.1| hypothetical protein IMCC14465_16040 [alpha proteobacterium
           IMCC14465]
          Length = 355

 Score =  323 bits (828), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 160/308 (51%), Positives = 228/308 (74%), Gaps = 2/308 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +++ R    EI+ LKS+I     D +M ++A  EL    ++    Q+ L   LLPKD+AD
Sbjct: 47  VTQYRKLIDEINDLKSII--DGNDDEMKELAEAELPELEEKLPAAQNDLEIMLLPKDEAD 104

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           + + ILEVRAGTGG+EA+LFA ++F+MY R+++  G+K E++G ++ ++ GYKE  AAI 
Sbjct: 105 DMNVILEVRAGTGGDEAALFAGNLFRMYCRHAELNGYKVEILGASDGEIGGYKEVVAAIR 164

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVDV++  +DLR+D +R
Sbjct: 165 GDSVFARLKFESGVHRVQRVPETESSGRIHTSAATVAVLPEPEEVDVQIEEKDLRVDVFR 224

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G GGQ  NTT+SAVR+TH+PTG+ +S QDE+SQH N+AKA++VL A+L+E ER R+  
Sbjct: 225 ASGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMQVLRARLFEAERDRLDS 284

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYN+PQGRVTDHR+ +T H +  ++ G++LD  IDALL +
Sbjct: 285 ERSADRRSQVGSGDRSERIRTYNYPQGRVTDHRINLTLHKLEKIVAGDSLDEVIDALLAE 344

Query: 304 QEMDAIAS 311
            +   +A+
Sbjct: 345 DQSRQLAA 352


>gi|365887823|ref|ZP_09426640.1| peptide chain release factor 1 [Bradyrhizobium sp. STM 3809]
 gi|365336576|emb|CCD99171.1| peptide chain release factor 1 [Bradyrhizobium sp. STM 3809]
          Length = 361

 Score =  323 bits (827), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 150/297 (50%), Positives = 211/297 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R   KE+   ++LI +   D +M  MA  E    +     L+  +  +LLPKD  D
Sbjct: 49  VKAYRAGVKELADTEALIADPDTDAEMRAMAEAERDELVARRGELEQKIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ +DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDAL 345


>gi|146306094|ref|YP_001186559.1| peptide chain release factor 1 [Pseudomonas mendocina ymp]
 gi|166223589|sp|A4XR61.1|RF1_PSEMY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145574295|gb|ABP83827.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           mendocina ymp]
          Length = 360

 Score =  323 bits (827), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 157/309 (50%), Positives = 218/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           ELR  Q +++G ++L+ E   D D+ +MA EE+  A +    L+  L + LLPKD  D R
Sbjct: 54  ELRKVQSDLEGAQALLKES--DPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LEVRAGTGG+EA++F+ D+F+MY RY++K+GW+ EV+   E +  G+KE  A + G 
Sbjct: 112 NVYLEVRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTYRS
Sbjct: 172 NVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+THIPTG  +  Q+ERSQH N+AKA+  L AKL + + +  H  
Sbjct: 232 SGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S+ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T +++S++M G  ++  I+ LL + 
Sbjct: 292 ISETRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLSEVMAG-GVEAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|296533064|ref|ZP_06895708.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
 gi|296266608|gb|EFH12589.1| peptide chain release factor RF1 [Roseomonas cervicalis ATCC 49957]
          Length = 351

 Score =  323 bits (827), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 162/310 (52%), Positives = 218/310 (70%), Gaps = 5/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  LR  ++  D  ++L+     D +M ++A  E     D    L+  L   LLPKD AD
Sbjct: 46  VEALRAAERARDEAEALL----ADPEMRELAEAEYYAQRDAVPVLERELRLMLLPKDAAD 101

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
               ILE+R   GG+EA LFA ++F  Y++Y+  +GW+F V+   ES+L G K A A + 
Sbjct: 102 AGSAILEIRPAAGGDEAGLFAAELFAAYQKYAAARGWRFGVLDYDESELGGIKGAVAEVE 161

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE  GR+HTS V+VA+LPQA++VDV++   DLRIDTYR
Sbjct: 162 GQGVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPQAEDVDVQINESDLRIDTYR 221

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T+SAVR+THIPTG  +++Q+ERSQH N+AKA+KVL A+LYE +RS+   
Sbjct: 222 ASGAGGQHVNKTDSAVRITHIPTGTVVAMQEERSQHKNRAKAMKVLRARLYEAQRSQAVA 281

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           SRS  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T H I  +M+GE +D  IDAL+ +
Sbjct: 282 SRSADRRAQVGTGDRSERIRTYNFPQGRVTDHRIGLTLHKIDRVMQGE-MDDIIDALIAE 340

Query: 304 QEMDAIASFG 313
            E   +A+ G
Sbjct: 341 DEAARLAAEG 350


>gi|421504253|ref|ZP_15951196.1| peptide chain release factor 1 [Pseudomonas mendocina DLHK]
 gi|400345023|gb|EJO93390.1| peptide chain release factor 1 [Pseudomonas mendocina DLHK]
          Length = 360

 Score =  323 bits (827), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 157/309 (50%), Positives = 218/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           ELR  Q +++G ++L+ E   D D+ +MA EE+  A +    L+  L + LLPKD  D R
Sbjct: 54  ELRKVQSDLEGAQALLKES--DPDLREMAEEEVAQAKEALTTLEDKLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LEVRAGTGG+EA++F+ D+F+MY RY++K+GW+ EV+   E +  G+KE  A + G 
Sbjct: 112 NVYLEVRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTYRS
Sbjct: 172 NVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+THIPTG  +  Q+ERSQH N+AKA+  L AKL + + +  H  
Sbjct: 232 SGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S+ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T +++S++M G  ++  I+ LL + 
Sbjct: 292 ISETRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLSEVMAG-GVEAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|167644945|ref|YP_001682608.1| peptide chain release factor 1 [Caulobacter sp. K31]
 gi|167347375|gb|ABZ70110.1| peptide chain release factor 1 [Caulobacter sp. K31]
          Length = 334

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/315 (49%), Positives = 226/315 (71%), Gaps = 9/315 (2%)

Query: 5   SELRTKQKEIDGLKSL------IYECSEDKDMLDMATEELCLAIDEE-KRLQSLLLKSLL 57
           +ELR   + +  L  L      + E + D +M  M ++E+  A+DE+   ++  L   L 
Sbjct: 18  AELRPVAEAVQALAKLAAERADLEEMTADPEMAAMVSDEIQ-ALDEKLPVMERELALMLA 76

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           P+D  +    ILEVRAGTGG+EA+LFA D+F+MY+RY+Q +GWK EV  V+E ++ GYKE
Sbjct: 77  PRDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYAQLQGWKVEVDSVSEGEMGGYKE 136

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A+++G GV+G+ KFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++V++ + + D+
Sbjct: 137 IIASVTGDGVFGRWKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEINDADI 196

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDTYRS G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+K L A+LY+++
Sbjct: 197 RIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDLQ 255

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R+ +  +RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG+ LD  I
Sbjct: 256 RTALDTARSDARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTVYNLPKVMEGDALDDII 315

Query: 298 DALLLQQEMDAIASF 312
             L+ + +   +AS 
Sbjct: 316 KPLIAEDQAARLASL 330


>gi|349686191|ref|ZP_08897333.1| peptide chain release factor 1 [Gluconacetobacter oboediens 174Bp2]
          Length = 353

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 155/309 (50%), Positives = 223/309 (72%), Gaps = 7/309 (2%)

Query: 4   ISELRT-KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +S LRT +Q E D  + L      D ++ ++A  EL     +   L+  +  ++LP+D+A
Sbjct: 48  VSALRTAEQAEHDATQMLA-----DPELKELAEAELETLRRQIPELRHDIRLAMLPRDEA 102

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER  ILE+R   GG+EA LFA ++F  Y+RY+ ++GW+FEV+   +S+L G +E  A+I
Sbjct: 103 DERSAILEIRPAAGGDEAGLFAAELFGAYQRYADQRGWRFEVLEYDQSELGGLREGIASI 162

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV +   DLRID Y
Sbjct: 163 TGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVEVNETDLRIDVY 222

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SAVR+TH+PT + +++Q+E+SQH N+AKA+K+L A+LYE  R+  H
Sbjct: 223 RASGAGGQHVNKTESAVRITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAH 282

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + I  +M GE LD F+DAL  
Sbjct: 283 ETRAADRRAQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKIDRVMAGE-LDEFVDALTQ 341

Query: 303 QQEMDAIAS 311
           +++   +A+
Sbjct: 342 EEQAALLAA 350


>gi|145348023|ref|XP_001418457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578686|gb|ABO96750.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 373

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 161/299 (53%), Positives = 220/299 (73%), Gaps = 2/299 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSL-LPKDD 61
           ++ +LR ++  ++ L        + K++ ++A EEL  A+D +   Q L L+ L LP DD
Sbjct: 64  VVKKLRAEKASLEELVRDASSGGDSKELAELAREELR-AVDIDLPDQELALQLLFLPHDD 122

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
           AD+R  ILEVRAG GG+EA+LFA ++F+MY  +++K GW+F+ + V+E+D +G +EASA 
Sbjct: 123 ADDRGAILEVRAGAGGDEAALFAAELFRMYALHARKSGWRFDTLNVSETDGKGVREASAE 182

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           I G GV+G+LKFESG+HRVQRVP TE  GRVHTS  S+A+LP A+EV++ ++ ED+RIDT
Sbjct: 183 ILGKGVFGRLKFESGVHRVQRVPETETQGRVHTSTASIAVLPHAEEVEMDIKEEDVRIDT 242

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
            R+ G+GGQH NTTNSAVR+TH PTG+ + IQDERSQH NKAKA  VL A+LY++ER ++
Sbjct: 243 MRASGAGGQHVNTTNSAVRLTHAPTGIQVVIQDERSQHKNKAKAFSVLKARLYDLEREKM 302

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
              RS+LRS  IG+GDRSERIRTYNF QGRV DHRV  T   ++ +M+G  LD   + L
Sbjct: 303 AKERSELRSSLIGTGDRSERIRTYNFAQGRVKDHRVEGTISDVNALMDGFLLDEITEKL 361


>gi|254428729|ref|ZP_05042436.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
 gi|196194898|gb|EDX89857.1| peptide chain release factor 1 [Alcanivorax sp. DG881]
          Length = 361

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 154/293 (52%), Positives = 216/293 (73%), Gaps = 8/293 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
           D DM +M  EE   A D + R++ L   L K +LPKD  D  +  LEVRAGTGG+EA++F
Sbjct: 73  DPDMREMGAEE---ARDAQARMEELAEELQKLMLPKDPRDGANVFLEVRAGTGGDEAAIF 129

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+F+MY +Y+ ++GWK E+V  +E +  GYKE  A + G GVY ++KFESG HRVQRV
Sbjct: 130 AGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQRV 189

Query: 144 PLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GR+HTSA +VAI+ +A+++ D+ +RNEDLRIDTYRS G+GGQH NTT+SAVR+T
Sbjct: 190 PATESQGRIHTSACTVAIMAEAEQLGDITIRNEDLRIDTYRSSGAGGQHVNTTDSAVRIT 249

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ +  QDERSQH NKA+A+ +L AKLY+ +++  H  ++  R   +GSGDRSERI
Sbjct: 250 HLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLVGSGDRSERI 309

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           RTYN+PQGRV+DHR+ +T + + ++MEG ++D  + ALL + + D +A+ G +
Sbjct: 310 RTYNYPQGRVSDHRINLTLYRLGELMEG-DMDELLGALLAEYQADQLAALGES 361


>gi|281208935|gb|EFA83110.1| peptide chain release factor 1 [Polysphondylium pallidum PN500]
          Length = 463

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/292 (54%), Positives = 210/292 (71%), Gaps = 9/292 (3%)

Query: 21  IYECSEDKDMLDMATEELC--LAIDEEKR-------LQSLLLKSLLPKDDADERDCILEV 71
           I    E K MLDM  EE    + I++ K        L+  L+ SLLP D  D+ + I+E+
Sbjct: 158 IGNIKELKMMLDMEKEEASREMIIEDLKAMGEQLAALEKSLIYSLLPADKDDDGNAIIEI 217

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG EA LFA ++F+MYE Y+  KGW+FE + ++ +D+ G +EASAAISG GV+G L
Sbjct: 218 RAGTGGGEAQLFAHEMFRMYEGYAATKGWRFESLDISYTDVGGCREASAAISGKGVFGFL 277

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K ESG+HRVQR+P TE  GR+HTS  +VAI+P+  EVD+++ + DL+ID +RS G+GGQ 
Sbjct: 278 KNESGVHRVQRIPDTETQGRIHTSTTTVAIMPEPKEVDIKINDRDLKIDVFRSSGNGGQS 337

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVR+ H+PTG+T+S+QDERSQ  NK+KA+KVL A+LYEMER R+   RS  R+ 
Sbjct: 338 VNTTDSAVRIVHLPTGITVSMQDERSQLQNKSKAMKVLRARLYEMERVRLQTERSAERNS 397

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           QIG   RSERIRTYNFPQ RVTDHRV IT + I  +M GE L  FI+ ++LQ
Sbjct: 398 QIGGATRSERIRTYNFPQDRVTDHRVNITTNDIDAIMTGETLGDFIEDIMLQ 449


>gi|88608013|ref|YP_506293.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
 gi|119361566|sp|Q2GE03.1|RF1_NEOSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|88600182|gb|ABD45650.1| peptide chain release factor 1 [Neorickettsia sennetsu str.
           Miyayama]
          Length = 367

 Score =  322 bits (826), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 227/310 (73%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           + LI+  +  ++E   L+ L+    ED+++ ++   +L    D   +L+  + + LLPKD
Sbjct: 47  VELIARYKKLKEEQAYLELLVKNPLEDQEIREIGKSDLQAIQDVIPKLELEIKRMLLPKD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D  + +LEVRAGTGG+EA+LFA  +F MY++Y+++  W+FE++ ++ +++ GYKEA+A
Sbjct: 107 KDDALNVMLEVRAGTGGDEAALFAASLFHMYQKYAERMKWRFEIISISHNEIGGYKEANA 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
           +ISG  V+ KLKFESG+HRVQRVP TE +GR+HTS  +VA+LP+ ++VDV++ ++DLRID
Sbjct: 167 SISGSDVFAKLKFESGVHRVQRVPETESAGRIHTSTATVAVLPEPEDVDVKINDKDLRID 226

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
            YRS G GGQ  NTT+SAVR+THIPTG+ +  QDE+SQH N+AKA+KVL  +LYE+ER++
Sbjct: 227 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNRAKAMKVLRVRLYEIERNK 286

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +    S +R  QIGSG+RSE+ RTYNFPQGR+TDHR+ +T + I++ ++   L+  I+AL
Sbjct: 287 VQQEISSMRKSQIGSGERSEKTRTYNFPQGRITDHRINLTTYRINETVKEGELEPIIEAL 346

Query: 301 LLQQEMDAIA 310
           + + E   +A
Sbjct: 347 IRENEARMLA 356


>gi|83859678|ref|ZP_00953198.1| peptide chain release factor 1 [Oceanicaulis sp. HTCC2633]
 gi|83852037|gb|EAP89891.1| peptide chain release factor 1 [Oceanicaulis sp. HTCC2633]
          Length = 357

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 229/310 (73%), Gaps = 8/310 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDA 62
           EL+T ++  +  +++I + S D+DM+++A EE     + +KRL  L   L   L+PKD  
Sbjct: 50  ELKTARESFEEAEAIIEDGS-DRDMVELAEEERQ---ELKKRLPGLERELQLLLIPKDRD 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D+   +LE+RAGTGG+EA+LFA D+F+MYERY+   GWK +VV  +E+++ GYKE  A++
Sbjct: 106 DDASIMLEIRAGTGGDEAALFAGDLFRMYERYASNHGWKVDVVEASEAEVGGYKEIVASV 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           SG GV+GK+KFESG+HRVQRVP+TE  GR+HTSA +VA+LP+ + V++ +++ED+RIDT 
Sbjct: 166 SGKGVFGKMKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPENVEIDIKDEDIRIDTM 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SAVR+THIPTG+ + +  E+SQH N+A A++VL A+LYE ER    
Sbjct: 226 RASGAGGQHVNKTESAVRMTHIPTGIVV-VSSEKSQHQNRAIAMQVLKARLYEKERREKD 284

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +R+  R  Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + + +++ G+ LD  IDALL 
Sbjct: 285 EARAAERKGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKLDEILSGDALDEVIDALLS 344

Query: 303 QQEMDAIASF 312
           + +   +A+ 
Sbjct: 345 EDQAAKLAAM 354


>gi|399519470|ref|ZP_10760265.1| peptide chain release factor 1 [Pseudomonas pseudoalcaligenes CECT
           5344]
 gi|399112566|emb|CCH36823.1| peptide chain release factor 1 [Pseudomonas pseudoalcaligenes CECT
           5344]
          Length = 360

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 156/309 (50%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           ELR  Q +++G ++L+ +   D DM +MA EE+  A +    L+  L + LLPKD  D R
Sbjct: 54  ELRKVQSDLEGAQALLKDS--DADMREMAEEEVAQAKEALVTLEDKLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ EV+   E +  G+KE  A + G 
Sbjct: 112 NVYLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVEVLSANEGEHGGFKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DTYRS
Sbjct: 172 NVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+THIPTG  +  Q+ERSQH N+AKA+  L AKL + + +  H  
Sbjct: 232 SGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQEAAAHKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S+ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T ++++D++ G  +D  I+ LL + 
Sbjct: 292 ISETRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLNDVIAG-GVDAIIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|40062805|gb|AAR37689.1| peptide chain release factor 1 [uncultured marine bacterium 440]
          Length = 359

 Score =  322 bits (825), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 152/302 (50%), Positives = 212/302 (70%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +KE   L+ +I +   D++M+ +A +EL   +++ K  + +L   LLPKD AD ++ ILE
Sbjct: 55  EKEKIELEKIIEDKESDEEMVQLAKKELNELLEKNKTHEKILRIYLLPKDGADAKNAILE 114

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA LF  D++KMYE+      W FE++ +++S   G+KE    I G  +Y  
Sbjct: 115 IRAGTGGDEAGLFVADLYKMYEKVCLNNKWSFEIISISKSGAGGFKEVILLIKGNNIYSF 174

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           LK+E G+HRVQRVP TE  GRVHTSA +VA+LP+A+EVD++++ +DLRID YRS GSGGQ
Sbjct: 175 LKYERGVHRVQRVPKTETQGRVHTSAATVAVLPEAEEVDIKIQEKDLRIDVYRSTGSGGQ 234

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ ++ QDE+SQH N+AK +K+L +++YE ER +    RSK R 
Sbjct: 235 SVNTTDSAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRVYEAEREKKDKERSKDRK 294

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            QIGSGDRSERIRTYNFPQGRVTDHR+ +T H + + + G+        L LQ +   +A
Sbjct: 295 NQIGSGDRSERIRTYNFPQGRVTDHRINVTLHKLKEFLSGDAFGELNQNLRLQDQKIKLA 354

Query: 311 SF 312
           S 
Sbjct: 355 SL 356


>gi|297618446|ref|YP_003703605.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146283|gb|ADI03040.1| peptide chain release factor 1 [Syntrophothermus lipocalidus DSM
           12680]
          Length = 355

 Score =  322 bits (825), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 157/294 (53%), Positives = 215/294 (73%), Gaps = 3/294 (1%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           R +Q + D    L  E  ED D+ +M  EE+ +  D+E++L+  L   LLPKD  DE++ 
Sbjct: 53  RVRQDKTDARAML--EEEEDDDLRNMLVEEIRVLSDKEEKLEQRLKLLLLPKDPNDEKNV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RAGTGGEEA+LFA D+F+MY RY++K+GWK +++  + SDL G+KE    + G G 
Sbjct: 111 IMEIRAGTGGEEAALFAADLFRMYSRYAEKQGWKVDIMDTSYSDLGGFKEIIFIVEGRGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFESG+HRVQR+P+TE  GR+HTSA +VA+LP+A+EV+V +   DLRID + S G 
Sbjct: 171 YSKLKFESGVHRVQRIPVTESGGRIHTSAATVAVLPEAEEVEVDINPNDLRIDVFCSSGP 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQ  NTT SAVR+TH+PTG+ +S QDE+SQH NK KA++VL ++L E++R+      + 
Sbjct: 231 GGQSVNTTQSAVRITHLPTGIVVSCQDEKSQHKNKDKAMRVLRSRLLELKRAEHEAEIAD 290

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T H +  ++EGE LD  I+AL+
Sbjct: 291 ARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLHKLDVVLEGE-LDEIIEALI 343


>gi|146337703|ref|YP_001202751.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS 278]
 gi|146190509|emb|CAL74508.1| peptide chain release factor 1 [Bradyrhizobium sp. ORS 278]
          Length = 361

 Score =  322 bits (825), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/297 (50%), Positives = 211/297 (71%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R   KE+   ++LI +   D +M  MA  E    +     L+  +  +LLPKD  D
Sbjct: 49  VKAYRAGVKELADTEALIADPDTDAEMRAMAESERDELVARRGELEQKIRIALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LE+RAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 109 DRNVVLEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQ 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ +DLRI+T R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEIEDVDVDIKQDDLRIETMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y+ ER ++  
Sbjct: 229 AQGAGGQHVNKTESAIRITHIPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQKVDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   +DAL
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDAL 345


>gi|399090598|ref|ZP_10754117.1| peptide chain release factor 1 [Caulobacter sp. AP07]
 gi|398027667|gb|EJL21211.1| peptide chain release factor 1 [Caulobacter sp. AP07]
          Length = 334

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 156/315 (49%), Positives = 224/315 (71%), Gaps = 9/315 (2%)

Query: 5   SELRTKQKEIDGLKSL------IYECSEDKDMLDMATEELCLAIDEE-KRLQSLLLKSLL 57
           +ELR   + +  L  L      + E + D DM  M  +E+  A+DE+   ++  L   L 
Sbjct: 18  AELRPVAEAVQALAKLAAERAGLEEMASDPDMAAMVADEMQ-ALDEKLPVMERELALMLA 76

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           P+D  +    ILEVRAGTGG+EA+LFA D+F+MY+RY+  +GWK EV  V+E ++ GYKE
Sbjct: 77  PRDKDENASAILEVRAGTGGDEAALFAGDLFRMYQRYASLQGWKVEVDSVSEGEMGGYKE 136

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A+++G GV+G+ KFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++V++ + + DL
Sbjct: 137 IIASVTGDGVFGRWKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDVEIEINDSDL 196

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDTYRS G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH N+A+A+K L A+LY+M+
Sbjct: 197 RIDTYRSSGAGGQHVNKTDSAVRITHLPTGVVVT-SSEKSQHQNRARAMKNLKARLYDMQ 255

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R  +  +RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + ++ ++EG+ LD  I
Sbjct: 256 REALDTARSDARKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLARVIEGDALDDII 315

Query: 298 DALLLQQEMDAIASF 312
             L+ + +   +AS 
Sbjct: 316 KPLIAEDQAARLASL 330


>gi|337287822|ref|YP_004627294.1| Peptide chain release factor 1 [Thermodesulfobacterium sp. OPB45]
 gi|334901560|gb|AEH22366.1| Peptide chain release factor 1 [Thermodesulfobacterium geofontis
           OPF15]
          Length = 368

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 156/292 (53%), Positives = 214/292 (73%), Gaps = 2/292 (0%)

Query: 18  KSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGG 77
           K LI E   D++++++A EEL    +  + L+  L   LLPKD  DE++ ILE+RAG GG
Sbjct: 68  KQLI-EVESDEELIELAKEELKELENRLEELEKKLPILLLPKDPNDEKNVILEIRAGAGG 126

Query: 78  EEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGI 137
           EEA+LFA D+ +MY+RY++KKGWKF+++   E+ L G+KE  A I G G Y +LK+ESG+
Sbjct: 127 EEAALFAADLLRMYQRYAEKKGWKFDILDANETGLGGFKEVIAKIEGKGAYSRLKYESGV 186

Query: 138 HRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNS 197
           HRVQRVP+TE SGR+HTS  +VA+LP+ DEV V +R EDL+I+T R+ G GGQH N T S
Sbjct: 187 HRVQRVPITESSGRIHTSTATVAVLPEVDEVTVEIRPEDLKIETMRASGHGGQHVNKTES 246

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+THIPTG+T++ Q+ERSQH NKA ALK+L AKLYE+     +      R  Q+G+G+
Sbjct: 247 AVRITHIPTGITVTCQNERSQHQNKATALKILRAKLYELALREQNEKIQTERKSQVGTGE 306

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           R E+IRTYNFPQ RVTDHR+G+T + + ++++GE LD FIDAL+    + A+
Sbjct: 307 RCEKIRTYNFPQNRVTDHRIGLTVYNLPEVLDGE-LDEFIDALIAHYRVKAL 357


>gi|296116158|ref|ZP_06834776.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977264|gb|EFG84024.1| peptide chain release factor 1 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 353

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 222/307 (72%), Gaps = 5/307 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           ++ LR  ++ +   ++L+    +D +M  +A  EL         L+  +  ++LP+D+AD
Sbjct: 48  VNALRATEQAVQDTQALL----DDPEMRGLAESELAELRRRIPELEHDIRIAMLPRDEAD 103

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R  ILE+R   GG+EA+LFA  +F  Y+RY+ ++GW+FE++   ES+L G +E  A+I+
Sbjct: 104 DRSAILEIRPAAGGDEAALFAGQMFGAYQRYADQRGWRFEILEYDESELGGLREGIASIT 163

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV + + DLRID YR
Sbjct: 164 GRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVEINDNDLRIDVYR 223

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SAVR+TH+P+G+ +++Q+E+SQH N+AKA+K+L A+LYE  R+  H 
Sbjct: 224 ASGAGGQHVNKTESAVRITHMPSGIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHE 283

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + I  +M GE  D F+DAL  +
Sbjct: 284 TRAADRRSQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKIDKVMGGE-FDEFVDALTQE 342

Query: 304 QEMDAIA 310
           ++   +A
Sbjct: 343 EQAALLA 349


>gi|110833384|ref|YP_692243.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
 gi|119361504|sp|Q0VS77.1|RF1_ALCBS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110646495|emb|CAL15971.1| peptide chain release factor 1 [Alcanivorax borkumensis SK2]
          Length = 361

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 154/291 (52%), Positives = 218/291 (74%), Gaps = 8/291 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
           D DM +M  EE   A D ++R+++L   L K +LPKD  D  +  LEVRAGTGG+EA++F
Sbjct: 73  DADMREMGAEE---ARDAQERMEALAAELQKLMLPKDPRDGANVFLEVRAGTGGDEAAIF 129

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+F+MY +Y+ ++GWK E+V  +E +  GYKE  A + G GVY ++KFESG HRVQRV
Sbjct: 130 AGDLFRMYSKYADQRGWKVEMVSASEGEHGGYKEVIARVIGDGVYSRMKFESGAHRVQRV 189

Query: 144 PLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GR+HTSA +VAI+ +A+++ D+++R EDLRIDTYRS G+GGQH NTT+SAVR+T
Sbjct: 190 PATESQGRIHTSACTVAIMAEAEDLGDIKIRTEDLRIDTYRSSGAGGQHVNTTDSAVRIT 249

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ +  QDERSQH NKA+A+ +L AKLY+ +++  H  ++  R   +GSGDRSERI
Sbjct: 250 HLPTGVVVECQDERSQHKNKARAMSLLSAKLYDAQQNAAHAEQAAERKSLVGSGDRSERI 309

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQGRVTDHR+ +T + +++++EG +LD  + ALL + + D +A+ G
Sbjct: 310 RTYNYPQGRVTDHRINLTLYRLNEIVEG-DLDEILGALLAEYQADQLAALG 359


>gi|222529063|ref|YP_002572945.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312622681|ref|YP_004024294.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
 gi|254790859|sp|B9MR68.1|RF1_ANATD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|222455910|gb|ACM60172.1| peptide chain release factor 1 [Caldicellulosiruptor bescii DSM
           6725]
 gi|312203148|gb|ADQ46475.1| peptide chain release factor 1 [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 355

 Score =  321 bits (823), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 222/313 (70%), Gaps = 3/313 (0%)

Query: 3   LISELRTKQKEIDGLKSL--IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           ++ + R  ++ +D +K    + +   D+D   +  EEL  A ++++ +++ L   LLPKD
Sbjct: 44  IVEKFREYKRILDTIKEAEELLDTDLDEDFEKLVKEELNRAKEQKEIVETQLKILLLPKD 103

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             DE++ I+E+RAG GGEEA+LFA ++F+MY RY+++K WK EV+  +ESDL G+KE   
Sbjct: 104 PNDEKNVIMEIRAGAGGEEAALFAAELFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIF 163

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            ISG G Y +LK+ESG+HRVQRVP+TE  GR+HTS  +VA+LP+ ++V+V +R EDL ID
Sbjct: 164 MISGKGAYSRLKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEVEDVEVEIREEDLEID 223

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T+R+GG+GGQH N T SAVR+ H PTG+ ++ QDERSQH N+ +A+K+L A+LY+  +S 
Sbjct: 224 TFRAGGAGGQHVNKTESAVRIVHKPTGIVVTCQDERSQHANRDRAMKILRARLYDYYQSI 283

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                   R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + +  +++GE LD  IDAL
Sbjct: 284 QQKEIESQRRSQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLEQILDGE-LDEIIDAL 342

Query: 301 LLQQEMDAIASFG 313
           +   + + +   G
Sbjct: 343 ITHFQTERLKEIG 355


>gi|148359876|ref|YP_001251083.1| peptide chain release factor 1 [Legionella pneumophila str. Corby]
 gi|296107926|ref|YP_003619627.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
 gi|166223567|sp|A5IED7.1|RF1_LEGPC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148281649|gb|ABQ55737.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila str.
           Corby]
 gi|295649828|gb|ADG25675.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
          Length = 362

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 156/301 (51%), Positives = 215/301 (71%), Gaps = 4/301 (1%)

Query: 14  IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           +D L  L+   S+DKD+  MA EE+ +   + + L   L   L+PKD  DER+  LEVRA
Sbjct: 62  LDSLNELLE--SDDKDLATMAEEEIDIVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRA 119

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           GTGG+EA++FA D+F+MY RY++ +GW+ E++  +  +  GYKE  A ISG  VY +LKF
Sbjct: 120 GTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKF 179

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHA 192
           ESG HRVQRVP TE  GRVHTSA +VAI+P+ DE+ D+++  +DLRIDTYRS G+GGQH 
Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHV 239

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           N T+SA+R+THIPTG+ +  QDERSQH N+AKA+ +L  +L + E S+    +++ R   
Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKSL 299

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +G+GDRSERIRTYNFPQGR+TDHR+ +T + +SD+MEG NL + ID L  +   + +A  
Sbjct: 300 VGTGDRSERIRTYNFPQGRLTDHRINLTIYQLSDIMEG-NLSLVIDPLKREYHAELLADL 358

Query: 313 G 313
           G
Sbjct: 359 G 359


>gi|407786207|ref|ZP_11133353.1| peptide chain release factor 1 [Celeribacter baekdonensis B30]
 gi|407201939|gb|EKE71935.1| peptide chain release factor 1 [Celeribacter baekdonensis B30]
          Length = 349

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 220/315 (69%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+L+    +I   +SL+ + SE      D DM  +A EE+ +        +  L  +LLP
Sbjct: 36  SDLKPVVDQIHAYQSLLSDLSEAEEMLLDPDMRALALEEIPVLKARLPLAEEALQIALLP 95

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD    I+E+R GTGG+EA+LFA D+ +MY+RY++ +GW+FE++ + ES+L G KE 
Sbjct: 96  KDSADTGSAIVEIRPGTGGDEAALFAGDLLRMYQRYAEARGWRFEIIELQESELGGVKEV 155

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I+G GV+ ++KFESG+HRVQRVP TE  GRVHTSA +VA+LP+A +VD+ +   D+R
Sbjct: 156 IANIAGQGVFARMKFESGVHRVQRVPTTESGGRVHTSAATVAVLPEAQDVDIEINANDIR 215

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+  A+ VL A+LY+ ER
Sbjct: 216 IDTMRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHRNREIAMNVLRARLYDAER 274

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            ++H +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M G +LD  ID
Sbjct: 275 QKLHDARSSERKSQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAVMNG-DLDEVID 333

Query: 299 ALLLQQEMDAIASFG 313
           AL+   +   +A  G
Sbjct: 334 ALISDHQAQLMAEMG 348


>gi|315122704|ref|YP_004063193.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496106|gb|ADR52705.1| peptide chain release factor 1 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 357

 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 159/302 (52%), Positives = 219/302 (72%), Gaps = 2/302 (0%)

Query: 10  KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCIL 69
           K+ E   L+++I +   D  + D+A  E+     E K L+  +   LLPKD  D++ CIL
Sbjct: 55  KKGEEQDLRTIIDDQDSDLGIRDLAKAEIGEVEKEIKALEYEISCLLLPKDTDDDKSCIL 114

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           E+RAGTGG EA+LF  D+F+MYERY+  + WK E++  +++D  GYKE  A ISG GV+ 
Sbjct: 115 EIRAGTGGSEAALFVGDLFRMYERYATYQKWKVEILSSSDNDDGGYKEIVATISGNGVFY 174

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 189
           ++KFESG+HRVQRVP TE SGRVHTSA +VA+LP+A+E+DV +  ED+RIDT R+ GSGG
Sbjct: 175 RMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAEEIDVAIATEDIRIDTMRASGSGG 234

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH NTT+SAVR+THIPTG+ ++   E+SQH N+ +A+KVL A+LY++ER R+   RS+ R
Sbjct: 235 QHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLQAMKVLRARLYDIERKRMAHERSENR 293

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
             QIGSGDRSERIRTYNFPQGR+TDHR+ +T + +  +++G  LD  ++ALL   +   I
Sbjct: 294 KAQIGSGDRSERIRTYNFPQGRITDHRINLTLYKLEYVLQG-YLDEIVNALLTAHQAKMI 352

Query: 310 AS 311
            S
Sbjct: 353 GS 354


>gi|436842689|ref|YP_007327067.1| peptide chain release factor 1 [Desulfovibrio hydrothermalis AM13 =
           DSM 14728]
 gi|432171595|emb|CCO24968.1| peptide chain release factor 1 [Desulfovibrio hydrothermalis AM13 =
           DSM 14728]
          Length = 356

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 147/283 (51%), Positives = 209/283 (73%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ +MA  E+    +   RL+  L   LLPKD  D ++ ILE+RAGTGGEEA+LF  D
Sbjct: 69  DPEIREMAEMEIAEIKERLPRLEDELKFLLLPKDPMDGKNIILEIRAGTGGEEAALFGAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++ GWK EV+    +   G+KE  AA+SG  +Y ++K+ESG HRVQRVP T
Sbjct: 129 LFRMYSRYAEQNGWKVEVLSSNPTGTGGFKEIIAAVSGSRIYSRMKYESGTHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VAI+P+A+E+DV++RNEDLR+D +R+ G GGQ  NTT+SA+R+THIPT
Sbjct: 189 ETQGRIHTSAATVAIMPEAEEIDVQVRNEDLRVDVFRASGPGGQSVNTTDSAIRITHIPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH NKAKA+KVLC++L + E+ + H   ++ R  Q+GSGDRSERIRTYN
Sbjct: 249 GLVVICQDEKSQHKNKAKAMKVLCSRLLQQEQDKQHEEMAEQRRAQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQGRVTDHR+ +T + +  ++EG ++   +DAL+   + +A+
Sbjct: 309 FPQGRVTDHRINLTLYKLDSVIEG-DMGELVDALVSHYQSEAL 350


>gi|312793258|ref|YP_004026181.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180398|gb|ADQ40568.1| peptide chain release factor 1 [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 355

 Score =  320 bits (821), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 148/287 (51%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+D   +  EEL  A ++++ +++ L   LLPKD  DE++ I+E+RAG GGEEA+LFA +
Sbjct: 70  DEDFEKLVKEELNQAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAE 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++K WK EV+  +ESDL G+KE    ISG G Y +LK+ESG+HRVQRVP+T
Sbjct: 130 LFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+ ++V+V +R EDL IDT+R+GG+GGQH N T SAVR+ H PT
Sbjct: 190 ESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDERSQH N+ +A+K+L A+LY+  +S         R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+G+T + +  +++GE LD  IDAL+   + + +   G
Sbjct: 310 FPQGRVTDHRIGLTLYKLEQVLDGE-LDEIIDALITHFQTERLKEVG 355


>gi|451980716|ref|ZP_21929102.1| Peptide chain release factor RF-1 [Nitrospina gracilis 3/211]
 gi|451762052|emb|CCQ90341.1| Peptide chain release factor RF-1 [Nitrospina gracilis 3/211]
          Length = 357

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 152/283 (53%), Positives = 210/283 (74%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+++++MA EE+   I  ++  ++ L   LLPKD  DE+  I+E+RAGTGG+EA LFA D
Sbjct: 70  DRELIEMAREEVESLILRKEEHEAQLKLMLLPKDPRDEKSVIMEIRAGTGGDEAGLFAAD 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + WK EV+  + + + GYKE    I G G Y +LKFE+G HRVQRVP T
Sbjct: 130 LFRMYSRYAEDRKWKIEVLASSVTGVGGYKEIICNIQGKGAYSRLKFEAGTHRVQRVPAT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSAV+VAILP+A+EVDV++   DL+ID YRS G GGQ  NTT+SAVR+TH+P+
Sbjct: 190 ETQGRIHTSAVTVAILPEAEEVDVQINPGDLKIDVYRSSGPGGQSVNTTDSAVRITHVPS 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDE+SQH NK +ALKVL A+LYE E+ R   + ++ R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVTCQDEKSQHKNKERALKVLRARLYEEEQRRQQEAMAQDRKSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQ RVTDHR+G+T H ++ +MEG +LD  ID L+   + +A+
Sbjct: 310 FPQERVTDHRIGLTLHKLTQIMEG-HLDELIDKLVYHYQTEAL 351


>gi|302872094|ref|YP_003840730.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
 gi|302574953|gb|ADL42744.1| peptide chain release factor 1 [Caldicellulosiruptor obsidiansis
           OB47]
          Length = 355

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/287 (51%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+D   +  EEL  A ++++ +++ L   LLPKD  DE++ I+E+RAG GGEEA+LFA +
Sbjct: 70  DEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAE 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++K WK EV+  +ESDL G+KE    ISG G Y +LK+ESG+HRVQRVP+T
Sbjct: 130 LFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+ ++V+V +R EDL IDT+R+GG+GGQH N T SAVR+ H PT
Sbjct: 190 ESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDERSQH N+ +A+K+L A+LY+  +S         R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+G+T + +  +++G +LD  IDAL+   + + +   G
Sbjct: 310 FPQGRVTDHRIGLTLYKLEQVLDG-DLDEIIDALITHFQTEKLKEVG 355


>gi|312127875|ref|YP_003992749.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
 gi|311777894|gb|ADQ07380.1| peptide chain release factor 1 [Caldicellulosiruptor hydrothermalis
           108]
          Length = 355

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 147/275 (53%), Positives = 206/275 (74%), Gaps = 1/275 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+D   +  EEL  A ++++ +++ L   LLPKD  DE++ I+E+RAG GGEEA+LFA +
Sbjct: 70  DEDFEKLVKEELNRAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAE 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++K WK EV+  +ESDL G+KE    ISG G Y +LK+ESG+HRVQRVP+T
Sbjct: 130 LFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+ ++V+V +R EDL IDT+R+GG+GGQH N T SAVR+ H PT
Sbjct: 190 ESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDERSQH N+ +A+K+L A+LY+  +S         R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           FPQGRVTDHR+G+T + +  +++GE LD  IDAL+
Sbjct: 310 FPQGRVTDHRIGLTLYKLEQVLDGE-LDEIIDALI 343


>gi|182677881|ref|YP_001832027.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|238691232|sp|B2IHL7.1|RF1_BEII9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182633764|gb|ACB94538.1| peptide chain release factor 1 [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 358

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 144/247 (58%), Positives = 191/247 (77%)

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           +LLPKD  DE+  ILE+RAGTGG+EA+LFA D+F+MY+RY++ KGW  E++ V+E    G
Sbjct: 98  ALLPKDADDEKSAILEIRAGTGGDEAALFAGDLFRMYQRYAEAKGWGVEILSVSEGTAGG 157

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           YKE  A I+G GV+ KLKFESG HRVQRVP TE  GR+HTSA +VA+LPQA+EVDV +  
Sbjct: 158 YKEIVAEITGKGVFAKLKFESGTHRVQRVPDTETQGRIHTSAATVAVLPQAEEVDVEINE 217

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
            DL+IDT R+ G+GGQH N T SA+R+TH+PTG  I +QDERSQH N+A+A+ +L +++Y
Sbjct: 218 ADLKIDTMRAQGAGGQHVNKTESAIRITHLPTGTVIFVQDERSQHKNRARAMSLLRSRIY 277

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           + +R ++   R+  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M GE LD
Sbjct: 278 DAKRQQLEAERAADRKAQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDKVMTGEALD 337

Query: 295 IFIDALL 301
             IDAL+
Sbjct: 338 EVIDALI 344


>gi|344995777|ref|YP_004798120.1| peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
 gi|343963996|gb|AEM73143.1| Peptide chain release factor 1 [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 355

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 148/287 (51%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+D   +  EEL  A ++++ +++ L   LLPKD  DE++ I+E+RAG GGEEA+LFA +
Sbjct: 70  DEDFEKLVKEELNHAKEQKEIVETQLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAE 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++K WK EV+  +ESDL G+KE    ISG G Y +LK+ESG+HRVQRVP+T
Sbjct: 130 LFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+ ++V+V +R EDL IDT+R+GG+GGQH N T SAVR+ H PT
Sbjct: 190 ESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDERSQH N+ +A+K+L A+LY+  +S         R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVTCQDERSQHANRDRAMKILRARLYDYYQSIQQKEIESQRRSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+G+T + +  +++GE LD  IDAL+   + + +   G
Sbjct: 310 FPQGRVTDHRIGLTLYKLEQVLDGE-LDEIIDALITHFQTERLKEVG 355


>gi|304317929|ref|YP_003853074.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779431|gb|ADL69990.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 353

 Score =  320 bits (820), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 157/310 (50%), Positives = 218/310 (70%), Gaps = 1/310 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           ++ + R  +K +D +KS       D D+ DMA EEL    + E +L + +   LLPKD  
Sbjct: 44  IVQKYREYKKVLDDIKSTKEIIELDDDLKDMAQEELKSLEERENKLLNEIKLLLLPKDPN 103

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DE+D I+E+RAG GGEEA+LFA D+F+MY  Y++KK WK+E++    ++L G+KE    I
Sbjct: 104 DEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVILNI 163

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G G Y +LKFESG+HRVQR+P TE  GR+HTS  +VA+LP+ ++VD+ +   D++ID +
Sbjct: 164 AGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDVF 223

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RSGG GGQ  NTT+SAVR+THIPTG+ IS QDERSQ  N+ +A+K+L AKLYEM R    
Sbjct: 224 RSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKE 283

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              S  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + +  +++G +LD  IDALL 
Sbjct: 284 KEISMTRKLQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDG-DLDEIIDALLA 342

Query: 303 QQEMDAIASF 312
           + + + + S 
Sbjct: 343 EDQAERLESM 352


>gi|349700134|ref|ZP_08901763.1| peptide chain release factor 1 [Gluconacetobacter europaeus LMG
           18494]
          Length = 353

 Score =  320 bits (820), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 153/309 (49%), Positives = 222/309 (71%), Gaps = 7/309 (2%)

Query: 4   ISELRT-KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           ++ LRT +Q E D  + L      D ++ ++A  EL     +   L+  +  ++LP+D+A
Sbjct: 48  VNALRTAEQAEQDATQMLA-----DPELRELAQAELDTLHTQIPELRHDIRLAMLPRDEA 102

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER  ILE+R   GG+EA LFA ++F  Y+RY+ ++GW+FEV+   +S+L G +E  A+I
Sbjct: 103 DERSAILEIRPAAGGDEAGLFAAELFGAYQRYADQRGWRFEVLEYDQSELGGLREGIASI 162

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV +   DLRID Y
Sbjct: 163 TGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAEEVDVEVNEGDLRIDVY 222

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SAVR+TH+PT + +++Q+E+SQH N+AKA+K+L A+LYE  R+  H
Sbjct: 223 RASGAGGQHVNKTESAVRITHLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAH 282

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + I  +M GE  D F+DAL  
Sbjct: 283 ETRAADRRAQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKIDRVMAGE-FDEFVDALTQ 341

Query: 303 QQEMDAIAS 311
           +++   +A+
Sbjct: 342 EEQAALLAA 350


>gi|365856781|ref|ZP_09396791.1| peptide chain release factor 1 [Acetobacteraceae bacterium AT-5844]
 gi|363717524|gb|EHM00896.1| peptide chain release factor 1 [Acetobacteraceae bacterium AT-5844]
          Length = 351

 Score =  320 bits (820), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 159/308 (51%), Positives = 219/308 (71%), Gaps = 5/308 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           + ELR  ++  D  ++L+     D +M ++A  E     D    L+  L   LLPKD AD
Sbjct: 46  VGELRAAERARDEAEALMA----DPEMRELAESEFYAQRDAVPVLERELRLMLLPKDAAD 101

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E + ILE+R   GG+EA LFA ++F  Y+RY+  +GW+FEV+   ES++ G K A+A + 
Sbjct: 102 EGNAILEIRPAAGGDEAGLFAGELFGAYQRYAATRGWRFEVLDYDESEVGGIKGATAEVQ 161

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE  GR+HTS V+VA+LP+A+EVDV++   DLRIDTYR
Sbjct: 162 GRGVFARLKFESGVHRVQRVPATETQGRIHTSTVTVAVLPEAEEVDVQINESDLRIDTYR 221

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T+SAVR+THIP+G+ +++Q+ERSQH N+AKA+KVL A+LY+ +R     
Sbjct: 222 ASGAGGQHVNKTDSAVRITHIPSGVVVAMQEERSQHKNRAKAMKVLRARLYDAQRLAADT 281

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T H I  +M+GE  D  IDAL  +
Sbjct: 282 ARAGDRKAQVGTGDRSERIRTYNFPQGRVTDHRIGLTLHKIDRVMQGE-FDEIIDALTAE 340

Query: 304 QEMDAIAS 311
            E   +A+
Sbjct: 341 DEAARLAA 348


>gi|52842546|ref|YP_096345.1| peptide chain release factor 1 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|54295177|ref|YP_127592.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|54298226|ref|YP_124595.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|378778233|ref|YP_005186672.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila ATCC 43290]
 gi|397664775|ref|YP_006506313.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
           pneumophila]
 gi|397667997|ref|YP_006509534.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
           pneumophila]
 gi|61214584|sp|Q5WUB1.1|RF1_LEGPL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214585|sp|Q5X2V3.1|RF1_LEGPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|61214588|sp|Q5ZT29.1|RF1_LEGPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52629657|gb|AAU28398.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53752011|emb|CAH13437.1| peptide chain release factor 1 [Legionella pneumophila str. Paris]
 gi|53755009|emb|CAH16497.1| peptide chain release factor 1 [Legionella pneumophila str. Lens]
 gi|307611181|emb|CBX00825.1| peptide chain release factor 1 [Legionella pneumophila 130b]
 gi|364509049|gb|AEW52573.1| peptide chain release factor 1 (RF-1) [Legionella pneumophila
           subsp. pneumophila ATCC 43290]
 gi|395128186|emb|CCD06391.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
           pneumophila]
 gi|395131408|emb|CCD09676.1| peptide chain release factor RF-1 [Legionella pneumophila subsp.
           pneumophila]
          Length = 362

 Score =  320 bits (820), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 156/301 (51%), Positives = 214/301 (71%), Gaps = 4/301 (1%)

Query: 14  IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           +D L  L+   S+DKD+  MA EE+     + + L   L   L+PKD  DER+  LEVRA
Sbjct: 62  LDSLNELLE--SDDKDLATMAEEEIDTVKKQIEELDEQLQWHLIPKDPDDERNIYLEVRA 119

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           GTGG+EA++FA D+F+MY RY++ +GW+ E++  +  +  GYKE  A ISG  VY +LKF
Sbjct: 120 GTGGDEAAIFAGDLFRMYSRYAESQGWQIELISASHGEHGGYKEIIAKISGQAVYSQLKF 179

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHA 192
           ESG HRVQRVP TE  GRVHTSA +VAI+P+ DE+ D+++  +DLRIDTYRS G+GGQH 
Sbjct: 180 ESGAHRVQRVPETESQGRVHTSACTVAIMPEVDEINDIQINPDDLRIDTYRSSGAGGQHV 239

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           N T+SA+R+THIPTG+ +  QDERSQH N+AKA+ +L  +L + E S+    +++ R   
Sbjct: 240 NKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEVSKQKQEQAQTRKSL 299

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +G+GDRSERIRTYNFPQGR+TDHR+ +T + +SD+MEG NL + ID L  +   + +A  
Sbjct: 300 VGTGDRSERIRTYNFPQGRLTDHRINLTIYQLSDIMEG-NLSLVIDPLKREYHAELLADL 358

Query: 313 G 313
           G
Sbjct: 359 G 359


>gi|146296536|ref|YP_001180307.1| peptide chain release factor 1 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|166223538|sp|A4XJN1.1|RF1_CALS8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145410112|gb|ABP67116.1| peptide chain release factor 1 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 355

 Score =  320 bits (819), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 148/287 (51%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+D   +  EEL  A ++++ ++  L   LLPKD  DE++ I+E+RAG GGEEA+LFA +
Sbjct: 70  DEDFEKLVKEELNQAKEQKEIVERELKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAE 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++K WK EV+  +ESDL G+KE    ISG G Y +LK+ESG+HRVQRVP+T
Sbjct: 130 LFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+ ++V+V +R EDL I+T+R+GG+GGQH N T SAVR+TH PT
Sbjct: 190 ESGGRIHTSTATVAVLPEVEDVEVEIREEDLEIETFRAGGAGGQHVNKTESAVRITHKPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +S QDERSQH N+ +A+K+L A+LY+  +S         R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVSCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRVTDHR+G+T + +  +++G +LD  IDAL+   + + +   G
Sbjct: 310 FPQGRVTDHRIGLTLYKLEQVLDG-DLDEIIDALITHFQTERLKEVG 355


>gi|94986447|ref|YP_594380.1| peptide chain release factor 1 [Lawsonia intracellularis
           PHE/MN1-00]
 gi|442555263|ref|YP_007365088.1| peptide chain release factor 1 [Lawsonia intracellularis N343]
 gi|119361555|sp|Q1MSG7.1|RF1_LAWIP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|94730696|emb|CAJ54058.1| Protein chain release factor A [Lawsonia intracellularis
           PHE/MN1-00]
 gi|441492710|gb|AGC49404.1| peptide chain release factor 1 [Lawsonia intracellularis N343]
          Length = 359

 Score =  320 bits (819), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 154/283 (54%), Positives = 209/283 (73%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D D+ +MA EE+     E   L+  L   LLPKD  DE++ +LE+RAGTGGEEA+LFA D
Sbjct: 69  DPDIQEMALEEIKKLELELTHLEYELKILLLPKDPLDEKNILLEIRAGTGGEEAALFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++K  WK E++  ++SD  G+KE  A I G  VY +LKFESG HRVQRVP T
Sbjct: 129 LFRMYCRYAEKMHWKVEIMSQSDSDTGGFKEIIALIQGDNVYSRLKFESGTHRVQRVPTT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+A++VD+ +R E+LR D +RS G GGQ  NTT+SAVRVTHIPT
Sbjct: 189 ESQGRIHTSAATVAVLPEAEDVDIEIRPEELRFDVFRSSGPGGQSVNTTDSAVRVTHIPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDE+SQH NKAKALKVL ++L ++++ +  + ++  R   +GSGDRSERIRTYN
Sbjct: 249 GIVVTCQDEKSQHKNKAKALKVLSSRLLQIKQEQQEIEQADARRALVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQGRVTDHR+ +T +++  +MEGE +  FIDAL    + +A+
Sbjct: 309 FPQGRVTDHRINLTLYSLIKVMEGE-IQEFIDALSTHAQTEAL 350


>gi|297180848|gb|ADI17053.1| protein chain release factor a [uncultured alpha proteobacterium
           HF0010_30A23]
          Length = 358

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 155/317 (48%), Positives = 225/317 (70%), Gaps = 11/317 (3%)

Query: 3   LISELRTKQKEIDGLKSL--IYECSEDKDMLDMATEE---LCLAIDE-EKRLQSLLLKSL 56
           ++ E+R  QK +  L+    +    +D DM  MA +E   L   ID  E+R++ LLL   
Sbjct: 46  IVEEMRAFQKSVQDLEDARALAASEDDADMRAMAEDEARELQAEIDATEQRMKVLLL--- 102

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
            P+D+AD R+ ILE+R GTGG+EA LFA D+  MY RY++ +GWKFE++ ++E+D+ G K
Sbjct: 103 -PRDEADSRNAILEIRPGTGGDEAGLFAGDLLAMYRRYAELQGWKFEILEMSENDVGGLK 161

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           E SA I+G  V+  LKFESG+HRVQRVP+TE  GR+HTSA +VA+LP+A++VD+ ++ ED
Sbjct: 162 EVSAKINGTNVFAALKFESGVHRVQRVPMTESGGRIHTSAATVAVLPEAEDVDIEIKAED 221

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT R+ G+GGQH NTT+SAVR+TH+PTG+ ++ Q ++SQH N+ +A++VL A+LYE 
Sbjct: 222 IRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIVT-QSQKSQHRNREEAMRVLRARLYEK 280

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
            R   +  R+  R  Q+GSGDRSERIRTYN+PQGRV+DHR+ +T H +  ++ G+ L   
Sbjct: 281 AREEANAERAANRKGQVGSGDRSERIRTYNYPQGRVSDHRINLTLHKLDRIVAGDGLGEV 340

Query: 297 IDALLLQQEMDAIASFG 313
           I+AL  + +   +A  G
Sbjct: 341 IEALTAEDQAARLAELG 357


>gi|115522190|ref|YP_779101.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisA53]
 gi|122298096|sp|Q07VB3.1|RF1_RHOP5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115516137|gb|ABJ04121.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisA53]
          Length = 359

 Score =  319 bits (818), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 214/310 (69%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R  + EI  + SLI +   D ++  MA  E     + E  L   +  +LLPKD  D
Sbjct: 49  VKAYRQVRDEIGDIDSLIADPDSDPELRAMAQAEHAALEEHEAELAQQIRIALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R+ +LEVRAGTGG+EASLFA D+F+MYE+++  +GW  EV+  +E    G+KE  A + 
Sbjct: 109 DRNVMLEVRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGAAGGFKEIIAEVK 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA++P+ +EVDV ++ +DL+IDT R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVMPEVEEVDVEIKQDDLKIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ E+ R+  
Sbjct: 229 AQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   +DAL   
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTD 348

Query: 304 QEMDAIASFG 313
            +   +A+ G
Sbjct: 349 YQAAQLAAQG 358


>gi|347759800|ref|YP_004867361.1| translation peptide chain release factor 1 [Gluconacetobacter
           xylinus NBRC 3288]
 gi|347578770|dbj|BAK82991.1| translation peptide chain release factor 1 [Gluconacetobacter
           xylinus NBRC 3288]
          Length = 353

 Score =  319 bits (818), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 152/290 (52%), Positives = 213/290 (73%), Gaps = 11/290 (3%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLK-----SLLPKDDADERDCILEVRAGTGGEEAS 81
           D +M ++A  EL     +E R Q   L+     ++LP+D+ADER  ILE+R   GG+EA 
Sbjct: 67  DPEMRELAQAEL-----DELRTQIPTLRHDIRLAMLPRDEADERSAILEIRPAAGGDEAG 121

Query: 82  LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 141
           LFA ++F  Y+RY+  +GW+FEV+   +S+L G +E  A+I+G GV+ +LK+ESG+HRVQ
Sbjct: 122 LFASELFGAYQRYADLRGWRFEVLEYDQSELGGLREGIASITGRGVFARLKYESGVHRVQ 181

Query: 142 RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           RVP TE  GR+HTS V+VA+LP+A+EVDV +   DLRID YR+ G+GGQH N T SAVR+
Sbjct: 182 RVPATESQGRIHTSTVTVAVLPEAEEVDVEVNEGDLRIDVYRASGAGGQHVNKTESAVRI 241

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PT + +++Q+E+SQH N+AKA+K+L A+LYE  R+  H SR+  R  Q+G+GDRSER
Sbjct: 242 THLPTNIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHESRAADRRAQVGTGDRSER 301

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           IRTYNFPQGRVTDHR+G+T + I  +M GE LD F+DAL  +++   +A+
Sbjct: 302 IRTYNFPQGRVTDHRIGLTLYKIDRVMAGE-LDEFVDALTQEEQAALLAA 350


>gi|302390589|ref|YP_003826410.1| peptide chain release factor 1 (bRF-1) [Thermosediminibacter oceani
           DSM 16646]
 gi|302201217|gb|ADL08787.1| bacterial peptide chain release factor 1 (bRF-1)
           [Thermosediminibacter oceani DSM 16646]
          Length = 364

 Score =  319 bits (818), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 152/298 (51%), Positives = 214/298 (71%), Gaps = 1/298 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           EI   + L+ E S D++M +   EEL      EK LQ  L   LLPKD  DE+D I+E+R
Sbjct: 57  EIKESRELLKETSNDREMEEFIKEELENLQKREKELQERLKILLLPKDPNDEKDVIMEIR 116

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AG GGEEA+LFA D+F+MY RY++++GWK E++  + ++L G+KE    + G G Y +LK
Sbjct: 117 AGAGGEEAALFAGDLFRMYTRYAERQGWKVELMSSSPTELGGFKEVIFEVMGRGAYSRLK 176

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           +ESG+HRVQR+P+TE  GR+HTS  +VA+LP+A+EVDV +   +LRID +RS G GGQ  
Sbjct: 177 YESGVHRVQRIPVTEAGGRIHTSTATVAVLPEAEEVDVEINPNELRIDVFRSSGHGGQSV 236

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           NTT+SAVR+TH+PTG+ ++ QDERSQ  N+ KA+K+L AKL EM++   +   ++ R  Q
Sbjct: 237 NTTDSAVRITHLPTGIVVTCQDERSQLKNRDKAMKILRAKLLEMKQREQNEKIAQSRRSQ 296

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           +G+GDRSERIRTYNFPQGRVTDHR+G T H + ++++GE LD  I+ L+ + +   +A
Sbjct: 297 VGTGDRSERIRTYNFPQGRVTDHRIGFTTHQLENILDGE-LDELIERLIAEDQARRLA 353


>gi|330994789|ref|ZP_08318711.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
 gi|329758050|gb|EGG74572.1| Peptide chain release factor 1 [Gluconacetobacter sp. SXCC-1]
          Length = 353

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 148/285 (51%), Positives = 211/285 (74%), Gaps = 1/285 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M ++A  EL     +   L+  +  ++LP+D+ADER  ILE+R   GG+EA LFA +
Sbjct: 67  DPEMRELAQAELDALRTQIPTLRHDIRLAMLPRDEADERSAILEIRPAAGGDEAGLFAAE 126

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F  Y+RY+  +GW+FEV+   +S+L G +E  A+I+G GV+ +LK+ESG+HRVQRVP T
Sbjct: 127 LFGAYQRYADLRGWRFEVLEYDQSELGGLREGIASITGRGVFARLKYESGVHRVQRVPAT 186

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS V+VA+LP+A+EVDV +   DLRID YR+ G+GGQH N T SAVR+TH+PT
Sbjct: 187 ESQGRIHTSTVTVAVLPEAEEVDVEVNEGDLRIDVYRASGAGGQHVNKTESAVRITHLPT 246

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
            + +++Q+E+SQH N+AKA+K+L A+LYE  R+  H +R+  R  Q+G+GDRSERIRTYN
Sbjct: 247 NIVVAMQEEKSQHKNRAKAMKILRARLYERNRAAAHETRAADRRAQVGTGDRSERIRTYN 306

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           FPQGRVTDHR+G+T + I  +M GE LD F+DAL  +++   +A+
Sbjct: 307 FPQGRVTDHRIGLTLYKIDRVMAGE-LDEFVDALTQEEQAALLAA 350


>gi|149185458|ref|ZP_01863774.1| protein chain release factor A [Erythrobacter sp. SD-21]
 gi|148830678|gb|EDL49113.1| protein chain release factor A [Erythrobacter sp. SD-21]
          Length = 355

 Score =  319 bits (817), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 209/289 (72%), Gaps = 6/289 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
           D +M  MA EEL    + +KRL +    L  ++LP+D AD +  +LE+RAGTGG+EA+LF
Sbjct: 68  DPEMKAMAEEELA---ELQKRLPAAERQLAIAMLPRDSADNKPAMLEIRAGTGGDEAALF 124

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+F+MYERY+ + GWK E V +  S++ G+KE  A+++G  V+ KLKFESG+HRVQRV
Sbjct: 125 AGDLFRMYERYAAEMGWKVEPVSMNASEVGGFKEIVASVTGPNVFAKLKFESGVHRVQRV 184

Query: 144 PLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
           P TE  GR+HTSA +VA+LP+ DEVDV+L   +L+IDTYR+ G+GGQH NTT+SA+R+TH
Sbjct: 185 PETESGGRIHTSAATVAVLPEPDEVDVQLDPTELKIDTYRASGAGGQHVNTTDSAIRITH 244

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           +PTG  ++ QD RSQH NK KA++VL  +LY+ +R     + ++ R   +GSGDRSERIR
Sbjct: 245 LPTGTVVTCQDGRSQHKNKEKAMQVLRTRLYDAQREATQGAEAEARKAMVGSGDRSERIR 304

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+G+T   +  ++ G  L   ++AL+ + E   +A+ 
Sbjct: 305 TYNYPQGRVTDHRIGLTLQKLPQIIAGPGLAELVEALIAEDEAKRLAAM 353


>gi|312134918|ref|YP_004002256.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
 gi|311774969|gb|ADQ04456.1| peptide chain release factor 1 [Caldicellulosiruptor owensensis OL]
          Length = 355

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 146/275 (53%), Positives = 205/275 (74%), Gaps = 1/275 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D+D   +  EEL  A ++++ ++  L   LLPKD  DE++ I+E+RAG GGEEA+LFA +
Sbjct: 70  DEDFEKLVKEELNWAKEQKEIVERDLKILLLPKDPNDEKNVIMEIRAGAGGEEAALFAAE 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++K WK EV+  +ESDL G+KE    ISG G Y +LK+ESG+HRVQRVP+T
Sbjct: 130 LFRMYSRYAERKNWKVEVMSTSESDLDGFKEVIFMISGKGAYSRLKYESGVHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+ ++++V +R EDL IDT+R+GG+GGQH N T SAVR+ H PT
Sbjct: 190 ESGGRIHTSTATVAVLPEVEDIEVEIREEDLEIDTFRAGGAGGQHVNKTESAVRIVHKPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDERSQH N+ +A+K+L A+LY+  +S         R  Q+G+GDRSERIRTYN
Sbjct: 250 GIVVTCQDERSQHANRDRAMKILRARLYDYYQSLQQKEIESQRRSQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           FPQGRVTDHR+G+T + +  +++GE LD  IDAL+
Sbjct: 310 FPQGRVTDHRIGLTLYKLEQVLDGE-LDEIIDALI 343


>gi|414165000|ref|ZP_11421247.1| peptide chain release factor 1 [Afipia felis ATCC 53690]
 gi|410882780|gb|EKS30620.1| peptide chain release factor 1 [Afipia felis ATCC 53690]
          Length = 358

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 154/311 (49%), Positives = 219/311 (70%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R    E+  L+S+I + + D DM  MA  E    ++ +  L+  +  +LLPKD  D
Sbjct: 47  VKAYRAGASELADLESMIADPATDADMRAMAESERPALLERQTELEQHIRIALLPKDAMD 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LEVRAGTGG+EASLFA D+F+MYER++  +GWK EV+  +E  + GYKE  A + 
Sbjct: 107 ERNVMLEVRAGTGGDEASLFAGDLFRMYERFATLQGWKVEVISASEGTMGGYKEIVAEVQ 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++D+ +++ DLRI+T R
Sbjct: 167 GRGAFAKLKFESGVHRVQRVPDTEASGRIHTSAATVAVLPEAEDIDIDIKDTDLRIETMR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ +++QD RSQH N+A A+ +L +++ + ER R   
Sbjct: 227 AQGAGGQHVNKTESAIRITHIPTGIVVNMQDSRSQHKNRASAMNILRSRVLDAERQRAAS 286

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   +DAL  +
Sbjct: 287 ERSADRRGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELVDALTTE 346

Query: 304 QEMDAIASFGS 314
            +   +A+  S
Sbjct: 347 HQAALLAAENS 357


>gi|188580162|ref|YP_001923607.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
 gi|226739114|sp|B1Z914.1|RF1_METPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179343660|gb|ACB79072.1| peptide chain release factor 1 [Methylobacterium populi BJ001]
          Length = 361

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/310 (49%), Positives = 220/310 (70%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  +  + G+++LI E   D +M  +A EE   A +  ++    L   LLPKD AD
Sbjct: 50  IRHYRAAEANLAGIRALIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLMLLPKDAAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG+EA+LFA D+F+MY +Y++ KGW+ EV+  +E  + GY+E  A + 
Sbjct: 110 EKSAILEIRAGTGGDEAALFAGDLFRMYAKYAESKGWRVEVISESEGTVGGYREVVAEVK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DL+IDT R
Sbjct: 170 GRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDIAINEADLKIDTMR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+PTG+ + +Q+ERSQH N+A+A+ +L +KL++ ER+    
Sbjct: 230 AQGAGGQHVNKTESAIRITHMPTGVVVFVQEERSQHKNRARAMALLRSKLFDAERTAKDS 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++M G  LD  IDAL+ +
Sbjct: 290 ARAADRKAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGPALDEVIDALVTE 349

Query: 304 QEMDAIASFG 313
            + + +A+ G
Sbjct: 350 HQAELLAAEG 359


>gi|114327270|ref|YP_744427.1| peptide chain release factor 1 [Granulibacter bethesdensis CGDNIH1]
 gi|119361545|sp|Q0BUJ8.1|RF1_GRABC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114315444|gb|ABI61504.1| bacterial peptide chain release factor 1 (RF-1) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 352

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 146/274 (53%), Positives = 206/274 (75%), Gaps = 1/274 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM ++A  E  +  ++   L   +  +LLPKD+ADER  ILE+R   GG+EASLFA  
Sbjct: 66  DPDMRELAESEAEILREKLPSLTREIRIALLPKDEADERSAILEIRPAAGGDEASLFAAQ 125

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F MY+RY++ +GW+FE++   ++ L G K   A I+G  V+ +LK+ESG+HRVQRVP T
Sbjct: 126 LFSMYQRYAEIRGWRFEILEYDDTGLGGLKGGMAEITGRSVFARLKYESGVHRVQRVPAT 185

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS V+VA+LP+A++VDV++   DLRID YR+ G+GGQH N T SAVR+TH+P+
Sbjct: 186 ESQGRIHTSTVTVAVLPEAEDVDVQVDEGDLRIDVYRASGAGGQHVNKTESAVRITHLPS 245

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +++Q+E+SQH N+AKA+K+L A+LYE +R+ +H SR+  R  Q+G+GDRSERIRTYN
Sbjct: 246 GIVVAMQEEKSQHKNRAKAMKILKARLYEQQRAALHASRAADRRAQVGTGDRSERIRTYN 305

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           FPQGRV+DHR+ +T + I  +M GE LD F+DAL
Sbjct: 306 FPQGRVSDHRINLTLYKIDRVMLGE-LDDFVDAL 338


>gi|167041273|gb|ABZ06029.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           microorganism HF4000_005D21]
 gi|167045778|gb|ABZ10424.1| putative peptidyl-tRNA hydrolase domain protein [uncultured marine
           bacterium HF4000_APKG3108]
          Length = 358

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/302 (50%), Positives = 214/302 (70%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +KE   L+ +I +   DKDM+++A  EL     +++  + +L   LLP D+AD ++ ILE
Sbjct: 55  EKEKVELEKIIEDKKSDKDMIELAKNELIQLSKKKEENEKILKVYLLPNDEADSKNAILE 114

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG EA+LF  D++KMYER    K W FE++ +++S+  G+KE    I G  +Y  
Sbjct: 115 IRAGTGGLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSF 174

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           LKFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVDV++  +DLRID +RS G GGQ
Sbjct: 175 LKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEEVDVKINEKDLRIDVFRSSGPGGQ 234

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+TH+PTG+ +S QDE+SQH N+AKA+K+L +++Y+ ER +    RSK R 
Sbjct: 235 SVNTTDSAVRITHLPTGIAVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRK 294

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            QIGSGDRSERIRTYNFPQ RVTDHR+ +T H + + + G+  + F   L +Q +   +A
Sbjct: 295 NQIGSGDRSERIRTYNFPQSRVTDHRINLTIHKLQEFLNGDAFEEFGQNLRIQDQEIKLA 354

Query: 311 SF 312
           + 
Sbjct: 355 NL 356


>gi|255083621|ref|XP_002508385.1| predicted protein [Micromonas sp. RCC299]
 gi|226523662|gb|ACO69643.1| predicted protein [Micromonas sp. RCC299]
          Length = 366

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 156/308 (50%), Positives = 222/308 (72%), Gaps = 2/308 (0%)

Query: 7   LRTKQKEIDGLKSLIYECSE-DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           ++ ++ E   L+ +I E +  D +M  MA +EL    +    L+  L   LLP D+AD+ 
Sbjct: 54  VKERRHETASLEQVIAESAGVDAEMAQMAEDELATLEETTPALEETLAHLLLPADEADDS 113

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
             ILEVRAG GG+EA+LFA D+ +MYE +++K GW+FE+V    S+  G KEA+A+++G 
Sbjct: 114 GVILEVRAGAGGDEAALFAADLLRMYEMFARKTGWRFELVAANASEAGGVKEATASLAGD 173

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
            VYG+LKFESG+HRVQRVP TE  GRVHTS  SVA+LPQA+ V++ +R++DL+IDT R+ 
Sbjct: 174 DVYGRLKFESGVHRVQRVPATETQGRVHTSTASVAVLPQAETVELDIRDDDLKIDTMRAS 233

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQH NTTNSAVR+TH+PTG+T+ +QDERSQH NK KA+KVL A++YE+ER ++  +R
Sbjct: 234 GAGGQHVNTTNSAVRITHVPTGVTVVMQDERSQHKNKEKAMKVLRARVYELERRKLADAR 293

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMME-GENLDIFIDALLLQQ 304
           +  R   IGSGDRSER+RTYN+ +GRV DHRV +  + +  +++ G+ L   +DAL L++
Sbjct: 294 ADQRRSLIGSGDRSERVRTYNYKEGRVKDHRVNLLLNDLPGLLDGGDALTQMLDALKLEE 353

Query: 305 EMDAIASF 312
               +A F
Sbjct: 354 RRQLMAEF 361


>gi|258542227|ref|YP_003187660.1| peptide chain release factor 1 [Acetobacter pasteurianus IFO
           3283-01]
 gi|384042148|ref|YP_005480892.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-12]
 gi|384050665|ref|YP_005477728.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|384053773|ref|YP_005486867.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|384057007|ref|YP_005489674.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|384059648|ref|YP_005498776.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|384062940|ref|YP_005483582.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|384119016|ref|YP_005501640.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256633305|dbj|BAH99280.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636364|dbj|BAI02333.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639417|dbj|BAI05379.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642473|dbj|BAI08428.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645528|dbj|BAI11476.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648581|dbj|BAI14522.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651634|dbj|BAI17568.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654625|dbj|BAI20552.1| translation peptide chain release factor 1 (RF-1) [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 352

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 148/267 (55%), Positives = 201/267 (75%), Gaps = 1/267 (0%)

Query: 47  RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVG 106
           +LQ  +  SLLPKD AD R  ILEVR   GG+EA LFA ++F MY RY+   GW+F V+ 
Sbjct: 86  QLQKDVRLSLLPKDVADARSAILEVRPAAGGDEAGLFAAELFDMYRRYADLNGWRFTVMD 145

Query: 107 VTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD 166
             ES+L G +E  A I+G GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+
Sbjct: 146 YDESELGGLREGIAEINGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAE 205

Query: 167 EVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKAL 226
           EVDV +   DLR+D +R+ G+GGQH N T SAVR+TH+P+G+ +S+Q+E+SQH N+AKA+
Sbjct: 206 EVDVEVNETDLRVDVFRASGAGGQHVNKTESAVRLTHMPSGIVVSMQEEKSQHKNRAKAM 265

Query: 227 KVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISD 286
           K+L A+LYE ER++ H +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  
Sbjct: 266 KILRARLYERERAQAHANRAADRRSQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKIDR 325

Query: 287 MMEGENLDIFIDALLLQQEMDAIASFG 313
           +M GE LD F+DAL  +++   +A+ G
Sbjct: 326 VMLGE-LDEFVDALTQEEQAALLAAEG 351


>gi|297183483|gb|ADI19614.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF0770_37D02]
          Length = 358

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 148/279 (53%), Positives = 202/279 (72%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           KE   L+ +I E   DK+M+ +A  EL     ++   +  L   LLPKD+AD ++ ILE+
Sbjct: 56  KEKKELEKIIDEKDGDKEMIKLAENELIQLSKKKSEYEQKLKIYLLPKDEADAKNAILEI 115

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG EA+LF  D++KMYE+   KK W  E++ +++S+  G+KE    I G  +Y  L
Sbjct: 116 RAGTGGLEATLFVADLYKMYEKVCLKKKWLLEIINISKSEAGGFKEVILLIKGNNIYSFL 175

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVD+++  +DLRID +RS G GGQ 
Sbjct: 176 KFESGVHRVQRVPKTETQGRVHTSAATVAVLPEAEEVDIKINEKDLRIDVFRSSGPGGQS 235

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVR+TH+P+G+ +S QDE+SQH N+AKA+K+L +++YE ER +    RS+ R  
Sbjct: 236 VNTTDSAVRITHLPSGVVVSQQDEKSQHKNRAKAMKILRSRVYENEREKKDKERSRDRKN 295

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEG 290
           QIGSGDRSERIRTYNFPQGRVTDHR+ +T H + + + G
Sbjct: 296 QIGSGDRSERIRTYNFPQGRVTDHRINLTLHKLEEFLNG 334


>gi|297543676|ref|YP_003675978.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841451|gb|ADH59967.1| peptide chain release factor 1 [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 356

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/302 (50%), Positives = 220/302 (72%), Gaps = 3/302 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           ++I+  K L+   S++K++ +MA EEL    ++++ L   +   L+PKD  DE++ I+E+
Sbjct: 56  EDINSTKELL--SSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEI 113

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE    ISG G Y +L
Sbjct: 114 RAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRL 173

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D+RID +RSGG GGQ 
Sbjct: 174 KYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIRIDVFRSGGHGGQS 233

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM         +++R  
Sbjct: 234 VNTTDSAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKEIAEVRKS 293

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++G +LD  IDAL+L  + + + +
Sbjct: 294 QVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDG-DLDEIIDALILNDQAEKLKN 352

Query: 312 FG 313
             
Sbjct: 353 VN 354


>gi|99080782|ref|YP_612936.1| peptide chain release factor 1 [Ruegeria sp. TM1040]
 gi|119361610|sp|Q1GI42.1|RF1_SILST RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|99037062|gb|ABF63674.1| bacterial peptide chain release factor 1 (bRF-1) [Ruegeria sp.
           TM1040]
          Length = 350

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/315 (48%), Positives = 223/315 (70%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+LR   ++I   + L+ + +E      D DM  +A EE+        + +  L  +LLP
Sbjct: 37  SDLRPVVEQISAYQQLLSDLAEAEEMLADPDMKALAEEEIPTLKAALPQAEHALQLALLP 96

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD+AD R  ILE+R GTGG+EA+LFA D+++MY RY++ +GWK +V+    S+L G KE 
Sbjct: 97  KDEADSRAAILEIRPGTGGDEAALFAADLYRMYSRYAETQGWKVDVIEEQASELGGLKEL 156

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I+G GV+ +LK+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A++VD+++   DLR
Sbjct: 157 VARINGDGVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEDVDIKIDANDLR 216

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 217 IDTMRASGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKTRLYDLER 275

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M G +LD  ID
Sbjct: 276 QRIDTERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLDQIM-GGDLDEIID 334

Query: 299 ALLLQQEMDAIASFG 313
           AL+ + +   +A  G
Sbjct: 335 ALISEHQAKLLAEMG 349


>gi|217969845|ref|YP_002355079.1| peptide chain release factor 1 [Thauera sp. MZ1T]
 gi|217507172|gb|ACK54183.1| peptide chain release factor 1 [Thauera sp. MZ1T]
          Length = 360

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 165/327 (50%), Positives = 228/327 (69%), Gaps = 15/327 (4%)

Query: 1   MHLISELRTKQKEIDGLKSLIYE-------CSEDKDML-DMATEELC-LAIDE-EKRLQS 50
           M+   EL  ++ EI+ + +L  E       C+  +++L D    EL  L + E E R+++
Sbjct: 32  MNAFRELSRERAEIEPVVALYREHRLAEADCATARELLADPEMRELGELELAEGEARIEA 91

Query: 51  L---LLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGV 107
           L   L ++LLP+D  D R+  LE+RAGTGG+EA+LFA D+ +MY RY++++ WK E+V  
Sbjct: 92  LEAELQRALLPRDPNDARNLFLEIRAGTGGDEAALFAGDLLRMYTRYAERQRWKVEIVSA 151

Query: 108 TESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE 167
           +ESDL GYKE  A + G G Y KLKFESG HRVQRVP+TE  GR+HTSA +VA+LP+ADE
Sbjct: 152 SESDLGGYKEVIARVVGNGAYSKLKFESGGHRVQRVPVTETQGRIHTSACTVAVLPEADE 211

Query: 168 VD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKAL 226
           V+ V +   DLRIDT+R+ G+GGQH N T+SAVR+THIPTG+ +  QD+RSQH NKA+A+
Sbjct: 212 VEAVDINPADLRIDTFRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHRNKAQAM 271

Query: 227 KVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISD 286
            VL A+LY+        + +  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T + +  
Sbjct: 272 AVLAARLYDARVRAQQSAEAAQRKSLVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDA 331

Query: 287 MMEGENLDIFIDALLLQQEMDAIASFG 313
           +M+GE LD  +DAL L+ + D +A+ G
Sbjct: 332 VMQGE-LDEIVDALTLEHQADLLAALG 357


>gi|333998861|ref|YP_004531473.1| peptide chain release factor 1 [Treponema primitia ZAS-2]
 gi|333740985|gb|AEF86475.1| peptide chain release factor 1 [Treponema primitia ZAS-2]
          Length = 361

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 153/294 (52%), Positives = 219/294 (74%), Gaps = 10/294 (3%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEEL----CLAIDEEKRLQSLLLKSLLPKDDADERDCI 68
           +++  KSL  +  +D +M +MA EEL        D E RL+ LL+    P+D  DE++ I
Sbjct: 57  QLEDAKSL-SQNEKDPEMREMAKEELRELETRLKDAEDRLKFLLI----PRDPLDEKNII 111

Query: 69  LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 128
           +E+RAGTGG+EA+LFA D+++MY R+++ +GWKFE++   E++L G+KE   +I+G  VY
Sbjct: 112 MEIRAGTGGDEAALFASDLYRMYARFAETRGWKFEIMSSNETELGGFKEIVFSITGNNVY 171

Query: 129 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 188
             L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+ADE ++ +R EDLRID  R+GG G
Sbjct: 172 ENLRYESGVHRVQRVPATEASGRIHTSAVTVAVLPEADETEIDIRQEDLRIDVMRAGGPG 231

Query: 189 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKL 248
           GQ  NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA+++L A++YEME ++    R++ 
Sbjct: 232 GQCVNTTDSAVRITHIPTGVVVHCQDEKSQIKNKAKAMRILRARVYEMEEAKAASERAEA 291

Query: 249 RSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           R  Q+GSGDRSERIRTYNFPQ R+TDHR+ +T + +  +M+G+  ++F DAL L
Sbjct: 292 RKNQVGSGDRSERIRTYNFPQNRLTDHRINLTLYKLDLIMQGDVEELF-DALKL 344


>gi|163850388|ref|YP_001638431.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218528948|ref|YP_002419764.1| peptide chain release factor 1 [Methylobacterium extorquens CM4]
 gi|240137464|ref|YP_002961935.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254559642|ref|YP_003066737.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
 gi|418059797|ref|ZP_12697735.1| Peptide chain release factor 1 [Methylobacterium extorquens DSM
           13060]
 gi|226739112|sp|A9W1A4.1|RF1_METEP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790888|sp|B7L246.1|RF1_METC4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|163661993|gb|ABY29360.1| peptide chain release factor 1 [Methylobacterium extorquens PA1]
 gi|218521251|gb|ACK81836.1| peptide chain release factor 1 [Methylobacterium extorquens CM4]
 gi|240007432|gb|ACS38658.1| peptide chain release factor RF-1 [Methylobacterium extorquens AM1]
 gi|254266920|emb|CAX22719.1| peptide chain release factor RF-1 [Methylobacterium extorquens DM4]
 gi|373566681|gb|EHP92672.1| Peptide chain release factor 1 [Methylobacterium extorquens DSM
           13060]
          Length = 361

 Score =  318 bits (815), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 220/310 (70%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  +  + G++++I E   D +M  +A EE   A +  ++    L   LLPKD AD
Sbjct: 50  IHHYRLAEANLAGIRAMIDEPGGDPEMRALAAEEKPEAEEALEQAHRALQLILLPKDAAD 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG+EA+LFA D+F+MY RY++ KGW+ EV+  +E    GY+E  A + 
Sbjct: 110 EKSAILEIRAGTGGDEAALFAGDLFRMYARYAESKGWRVEVISESEGTAGGYREVVAEVK 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G  V+ +LKFESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DL+IDT R
Sbjct: 170 GRSVFSRLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAEEVDIVVNEADLKIDTMR 229

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIPTG+ + +Q+ERSQH N+A+A+ +L +KL++ ER+    
Sbjct: 230 AQGAGGQHVNKTESAIRITHIPTGVVVFVQEERSQHKNRARAMSLLRSKLFDAERTAKDS 289

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++M G+ LD  IDAL+ +
Sbjct: 290 ARAADRKAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVMAGQALDEVIDALVTE 349

Query: 304 QEMDAIASFG 313
            + + +A+ G
Sbjct: 350 HQAELLAAEG 359


>gi|313672261|ref|YP_004050372.1| peptide chain release factor 1 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939017|gb|ADR18209.1| bacterial peptide chain release factor 1 (bRF-1) [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 356

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 150/287 (52%), Positives = 211/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           DKD++++A  EL    ++ +++   L   LLPKD  DE++  +E+RAGTGGEE++LFA D
Sbjct: 70  DKDLIELAEIELAEGKEKLEKISEELKILLLPKDPFDEKNIYIEIRAGTGGEESALFAAD 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY++K GWK E++   E+ + GYKE    + G   Y KLK+E+G HRVQR+P T
Sbjct: 130 LLRMYIRYAEKCGWKTEIIDANETGMGGYKEVILLVKGKNAYSKLKYEAGGHRVQRIPET 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E SGR+HTSA +VA++P+AD+VDV +  +DLRID YRS G+GGQH NTT+SAVR+THIPT
Sbjct: 190 ESSGRIHTSACTVAVIPEADDVDVHIDPKDLRIDVYRSSGAGGQHVNTTDSAVRITHIPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +S QDERSQ  NK KA+K+L +K++EME  R    +++ R +Q+GSGDRSERIRTYN
Sbjct: 250 GIVVSCQDERSQIKNKEKAMKLLKSKIFEMELERQRTEQAENRKQQVGSGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQ R+TDHR+ +T + +  +MEGE LD  IDAL+   + + + + G
Sbjct: 310 FPQNRLTDHRINLTVYNLDMVMEGE-LDEIIDALITYDQAEKLKNIG 355


>gi|170742857|ref|YP_001771512.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
 gi|226739116|sp|B0UAV4.1|RF1_METS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|168197131|gb|ACA19078.1| peptide chain release factor 1 [Methylobacterium sp. 4-46]
          Length = 359

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 215/310 (69%), Gaps = 2/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R  + E+ G+++++ E   D +M  +A EE              L   LLPKD AD
Sbjct: 50  IRAYRAAEAELRGVEAMLQEG--DPEMRALAAEEKPEVEAARDAAAKALQIMLLPKDAAD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG+EA+LFA D+ +MY RY+  KGWK EVV  +   + GY+E  A + 
Sbjct: 108 EKSAILEIRAGTGGDEAALFAGDLLRMYARYADLKGWKIEVVSESPGTMGGYREVVAEVK 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DL+IDT R
Sbjct: 168 GRGVFARLKFESGAHRVQRVPETETQGRIHTSAATVAVLPEAEEVDIHVNEADLKIDTMR 227

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+THIP+G+ + +Q+ERSQH N+A+A+ VL A+LYE ERS+   
Sbjct: 228 AQGAGGQHVNKTESAIRITHIPSGIVVFVQEERSQHKNRARAMAVLRARLYEQERSQKDA 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +++ G  LD  +DAL+ +
Sbjct: 288 ARAADRRAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTE 347

Query: 304 QEMDAIASFG 313
            +   +A+ G
Sbjct: 348 HQAALLAAEG 357


>gi|385808994|ref|YP_005845390.1| protein chain release factor A [Ignavibacterium album JCM 16511]
 gi|383801042|gb|AFH48122.1| Protein chain release factor A [Ignavibacterium album JCM 16511]
          Length = 359

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 152/291 (52%), Positives = 216/291 (74%), Gaps = 2/291 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           K+I+G K +I   +E K+++DMA  E+     ++++L+  +   LLPKD  D+++ I+E+
Sbjct: 58  KDIEGNKEIINNSTE-KELVDMAYAEMDELNAQKEKLEEEIKVLLLPKDPNDDKNVIMEI 116

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGGEEA+LFA D+F+MY RY++ +GWK+E++ + E+ L G KE   ++SG  VYG L
Sbjct: 117 RAGTGGEEAALFANDLFRMYTRYAEIRGWKYEIIDLNETGLGGIKEVILSVSGDNVYGDL 176

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE SGRVHTSA SVA+LP+ ++V+V +   DL+ID +RSGG+GGQ+
Sbjct: 177 KYESGVHRVQRVPETEASGRVHTSAASVAVLPEVEDVEVEINPNDLKIDIFRSGGAGGQN 236

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            N   +AVR+TH+PTG+ +  QDERSQ  N+ KA+KVL A+LY+ME  +     S  R  
Sbjct: 237 VNKVETAVRITHLPTGIVVQCQDERSQLKNRQKAMKVLKARLYDMEMRKQMEQISAQRKS 296

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           Q+ SGDRSE+IRTYNFPQ RVTDHR+G+T + +S++MEG+ LD  I+ L L
Sbjct: 297 QVRSGDRSEKIRTYNFPQNRVTDHRIGLTLYNLSNIMEGQ-LDNLIEQLKL 346


>gi|449104319|ref|ZP_21741059.1| peptide chain release factor 1 [Treponema denticola AL-2]
 gi|449119189|ref|ZP_21755588.1| peptide chain release factor 1 [Treponema denticola H1-T]
 gi|449121581|ref|ZP_21757928.1| peptide chain release factor 1 [Treponema denticola MYR-T]
 gi|448950180|gb|EMB31003.1| peptide chain release factor 1 [Treponema denticola MYR-T]
 gi|448951115|gb|EMB31931.1| peptide chain release factor 1 [Treponema denticola H1-T]
 gi|448963338|gb|EMB44016.1| peptide chain release factor 1 [Treponema denticola AL-2]
          Length = 361

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 218/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DTELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+EV+ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G +LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDSVMQG-SLDELIDALCI 344


>gi|422341219|ref|ZP_16422160.1| peptide chain release factor 1 [Treponema denticola F0402]
 gi|449116740|ref|ZP_21753186.1| peptide chain release factor 1 [Treponema denticola H-22]
 gi|325474790|gb|EGC77976.1| peptide chain release factor 1 [Treponema denticola F0402]
 gi|448952995|gb|EMB33791.1| peptide chain release factor 1 [Treponema denticola H-22]
          Length = 361

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 218/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+EV+ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G +LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDSVMQG-SLDELIDALCI 344


>gi|421852079|ref|ZP_16284770.1| translation peptide chain release factor 1 [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
 gi|371479770|dbj|GAB29973.1| translation peptide chain release factor 1 [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
          Length = 352

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 148/267 (55%), Positives = 201/267 (75%), Gaps = 1/267 (0%)

Query: 47  RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVG 106
           +LQ  +  SLLPKD AD R  ILEVR   GG+EA LFA ++F MY RY+   GW+F V+ 
Sbjct: 86  QLQKDVRLSLLPKDVADARSAILEVRPAAGGDEAGLFAAELFDMYRRYADLNGWRFTVMD 145

Query: 107 VTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD 166
             ES+L G +E  A I+G GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A+
Sbjct: 146 YDESELGGLREGIAEINGKGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAE 205

Query: 167 EVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKAL 226
           EVDV +   DLR+D +R+ G+GGQH N T SAVR+TH+P+G+ +S+Q+E+SQH N+AKA+
Sbjct: 206 EVDVDINETDLRVDVFRASGAGGQHVNKTESAVRLTHMPSGIVVSMQEEKSQHKNRAKAM 265

Query: 227 KVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISD 286
           K+L A+LYE ER++ H +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  
Sbjct: 266 KILRARLYERERAQAHANRAADRRSQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKIDR 325

Query: 287 MMEGENLDIFIDALLLQQEMDAIASFG 313
           +M GE LD F+DAL  +++   +A+ G
Sbjct: 326 VMLGE-LDEFVDALTQEEQAALLAAEG 351


>gi|327399685|ref|YP_004340554.1| peptide chain release factor 1 [Hippea maritima DSM 10411]
 gi|327182314|gb|AEA34495.1| Peptide chain release factor 1 [Hippea maritima DSM 10411]
          Length = 354

 Score =  318 bits (814), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 150/258 (58%), Positives = 195/258 (75%), Gaps = 1/258 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD+AD+RD ILE+RAGTGGEEA+LFA D+F+MY RY++ KG+K EV+  + SD  G 
Sbjct: 97  LLPKDEADDRDVILEIRAGTGGEEAALFAADLFRMYSRYAENKGFKVEVLSKSLSDTGGI 156

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A I G G Y   K ESG HRVQR+P+TE  GR+HTSA +VA+LP+A+ VDV ++ E
Sbjct: 157 KEIIAEIKGKGAYHLFKHESGTHRVQRIPITESQGRIHTSAATVAVLPEAENVDVEIKPE 216

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRID +R+ G GGQH NTT+SAVR+TH+PTGM +S QDE+SQ  NK KALK+L ++LY+
Sbjct: 217 DLRIDVFRASGHGGQHVNTTDSAVRITHLPTGMVVSCQDEKSQLKNKEKALKILKSRLYD 276

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
             R +    R+K R  QIGSGDRSERIRTYNFPQGRVTDHR+ +T + +  +MEG +LD 
Sbjct: 277 FYRRKKDEERAKERKSQIGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDSIMEG-DLDE 335

Query: 296 FIDALLLQQEMDAIASFG 313
            I+AL++ ++   +   G
Sbjct: 336 LIEALIVDEQARKLKESG 353


>gi|220920161|ref|YP_002495462.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
 gi|254790889|sp|B8IUB4.1|RF1_METNO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219944767|gb|ACL55159.1| peptide chain release factor 1 [Methylobacterium nodulans ORS 2060]
          Length = 359

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 215/310 (69%), Gaps = 2/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R    E+ G+++++ E   D +M  +A EE              L   LLPKD AD
Sbjct: 50  IRAYRAADAELRGVEAMLEEG--DPEMRALAAEEKPEVEAARDAAAKALQILLLPKDSAD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+  ILE+RAGTGG+EA+LFA D+F+MY RY+  KGWK EVV  +   + GY+E  A + 
Sbjct: 108 EKSAILEIRAGTGGDEAALFAGDLFRMYARYADLKGWKVEVVSESPGTMGGYREVVAEVK 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DL+IDT R
Sbjct: 168 GRGVFARLKFESGAHRVQRVPETETQGRIHTSAATVAVLPEAEEVDIHVNEADLKIDTMR 227

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+P+G+ + +Q+ERSQH N+A+A+ VL A+LYE ERS+   
Sbjct: 228 AQGAGGQHVNKTESAIRITHMPSGIVVFVQEERSQHKNRARAMAVLRARLYEQERSQKDA 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +++ G  LD  +DAL+ +
Sbjct: 288 ARAADRRAQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLEEVLAGTALDELVDALVTE 347

Query: 304 QEMDAIASFG 313
            +   +A+ G
Sbjct: 348 HQAALLAAEG 357


>gi|407697445|ref|YP_006822233.1| peptide chain release factor 1 [Alcanivorax dieselolei B5]
 gi|407254783|gb|AFT71890.1| Peptide chain release factor 1 [Alcanivorax dieselolei B5]
          Length = 365

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 155/309 (50%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E RT Q+ ++  ++L  +   D +M  M  EE+  A    ++L+S L +++LPKD  D  
Sbjct: 54  EYRTTQENLETARALTEDS--DPEMRAMGQEEVREAQARLEQLESDLQRAMLPKDPRDNA 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
              LE+RAGTGG+EA+LFA D+F+MY RY+ ++GWK E V  +E +  GYKE  A + G 
Sbjct: 112 GVYLEIRAGTGGDEAALFAGDLFRMYSRYADQRGWKVETVSASEGEHGGYKEVIARVMGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRS 184
           GVY +LKFESG HRVQRVP TE  GR+HTSA +VA++ +A+E  D+ +RNEDLRIDTYRS
Sbjct: 172 GVYSRLKFESGAHRVQRVPATESQGRIHTSACTVAVMAEAEEAGDIEIRNEDLRIDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SAVR+TH+PTG+ +  QDERSQH NKAKA+ +L A+L +   S     
Sbjct: 232 SGAGGQHVNTTDSAVRITHLPTGVVVECQDERSQHKNKAKAMSLLKARLLDARESASQAE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
           ++  R   +GSGDRSERIRTYNFPQGR+TDHR+ +T + +++++ G ++D  +DALL + 
Sbjct: 292 QAAQRKSLVGSGDRSERIRTYNFPQGRLTDHRINLTLYRLNEIVAG-DMDEVLDALLAEH 350

Query: 305 EMDAIASFG 313
           + + +A+  
Sbjct: 351 QAEQLAALA 359


>gi|449105623|ref|ZP_21742325.1| peptide chain release factor 1 [Treponema denticola ASLM]
 gi|451969926|ref|ZP_21923155.1| peptide chain release factor 1 [Treponema denticola US-Trep]
 gi|448967006|gb|EMB47650.1| peptide chain release factor 1 [Treponema denticola ASLM]
 gi|451701381|gb|EMD55853.1| peptide chain release factor 1 [Treponema denticola US-Trep]
          Length = 361

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 218/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+EV+ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAIRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G +LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDSVMQG-SLDELIDALCI 344


>gi|118602715|ref|YP_903930.1| peptide chain release factor 1 [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166223599|sp|A1AX02.1|RF1_RUTMC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118567654|gb|ABL02459.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus Ruthia
           magnifica str. Cm (Calyptogena magnifica)]
          Length = 363

 Score =  317 bits (813), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 211/284 (74%), Gaps = 8/284 (2%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLL---KSLLPKDDADERDCILEVRAGTGGEEASL 82
           +D D+  MA EE+   +D +K+L  L L   KSLLPKD  D R+ I+E+RAGTGG EAS+
Sbjct: 72  DDMDIKAMAKEEM---LDVKKKLDHLYLELKKSLLPKDPNDSRNIIIEIRAGTGGNEASI 128

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F+ ++FKMY RY++KK W+ EV+  +  +  G+KE  A ISGVGVY KLKFESG HRVQR
Sbjct: 129 FSSNLFKMYSRYTEKKKWQIEVISSSLGEHGGFKEIIARISGVGVYSKLKFESGAHRVQR 188

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GRVHTSA ++AI+P+ + + +V +   D+R+DT+R+ G+GGQH N TNSAVR+
Sbjct: 189 VPETESQGRVHTSACTIAIMPEVENIEEVNINMSDVRVDTFRASGAGGQHVNKTNSAVRI 248

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG     QD RSQH NKA+AL VL ++++++++   H  ++  R E IGSGDRS+R
Sbjct: 249 THIPTGTVAECQDGRSQHKNKAQALLVLASRIFDLQQQEQHKEQASTRKELIGSGDRSQR 308

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           IRTYN+PQGR+TDHR+ +T + +S++MEG NL+  I+ L+++Q+
Sbjct: 309 IRTYNYPQGRITDHRINLTLYKLSEIMEG-NLNAIIEPLIVEQQ 351


>gi|390568973|ref|ZP_10249262.1| peptide chain release factor 1 [Burkholderia terrae BS001]
 gi|389939099|gb|EIN00939.1| peptide chain release factor 1 [Burkholderia terrae BS001]
          Length = 360

 Score =  317 bits (813), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 155/294 (52%), Positives = 209/294 (71%), Gaps = 2/294 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  A D+ ++L+  L K LLPKD  DER+  LE+RAGTGG+E++L
Sbjct: 67  ELLSDASMKDFAEEEIRAARDQMEKLEGELQKMLLPKDPNDERNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E++  +ESDL GYKE    I+G   Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGDAAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           IRTYNFPQGR+TDHR+ +T + +  +MEG +LD  I AL+ + + + +AS G T
Sbjct: 307 IRTYNFPQGRLTDHRINLTLYRLEALMEG-DLDELIAALVSEHQAELLASLGDT 359


>gi|42527989|ref|NP_973087.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
 gi|449111028|ref|ZP_21747627.1| peptide chain release factor 1 [Treponema denticola ATCC 33521]
 gi|449114156|ref|ZP_21750636.1| peptide chain release factor 1 [Treponema denticola ATCC 35404]
 gi|81570139|sp|Q73JU6.1|RF1_TREDE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|41819034|gb|AAS13006.1| peptide chain release factor 1 [Treponema denticola ATCC 35405]
 gi|448957153|gb|EMB37905.1| peptide chain release factor 1 [Treponema denticola ATCC 35404]
 gi|448959291|gb|EMB40012.1| peptide chain release factor 1 [Treponema denticola ATCC 33521]
          Length = 361

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 218/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+EV+ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G +LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDAVMQG-SLDELIDALCI 344


>gi|289577389|ref|YP_003476016.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
 gi|289527102|gb|ADD01454.1| peptide chain release factor 1 [Thermoanaerobacter italicus Ab9]
          Length = 356

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 153/302 (50%), Positives = 219/302 (72%), Gaps = 3/302 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           ++I+  K L+   S++K++ +MA EEL    ++++ L   +   L+PKD  DE++ I+E+
Sbjct: 56  EDINSTKELL--SSDEKELREMAEEELSHLEEKKEELLEEIKILLIPKDPNDEKNVIMEI 113

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE    ISG G Y +L
Sbjct: 114 RAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRL 173

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D+RID +RSGG GGQ 
Sbjct: 174 KYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDIRIDVFRSGGHGGQS 233

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM         ++ R  
Sbjct: 234 VNTTDSAVRVTHIPTGIVVTCQDERSQLQNRERALKILRAKLYEMALQEQQKEIAEARKS 293

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++G +LD  IDAL+L  + + + +
Sbjct: 294 QVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDG-DLDEIIDALILNDQAEKLKN 352

Query: 312 FG 313
             
Sbjct: 353 VN 354


>gi|449124523|ref|ZP_21760842.1| peptide chain release factor 1 [Treponema denticola OTK]
 gi|449129526|ref|ZP_21765756.1| peptide chain release factor 1 [Treponema denticola SP37]
 gi|448942854|gb|EMB23748.1| peptide chain release factor 1 [Treponema denticola OTK]
 gi|448945574|gb|EMB26444.1| peptide chain release factor 1 [Treponema denticola SP37]
          Length = 361

 Score =  317 bits (812), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 217/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+EV+ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G  LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDSVMQG-ALDELIDALCI 344


>gi|316932075|ref|YP_004107057.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
 gi|315599789|gb|ADU42324.1| peptide chain release factor 1 [Rhodopseudomonas palustris DX-1]
          Length = 361

 Score =  317 bits (812), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 219/313 (69%), Gaps = 2/313 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +   R  + E+  +  L+ + + + +M  MA  E   L    ++ +Q + + +LLPKD  
Sbjct: 49  VKSYRQVRDELGEIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRI-ALLPKDAM 107

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER+ +LE+RAGTGG+EASLFA D+F+MYE+++  +GW  EV+  +E  + G+KE  A +
Sbjct: 108 DERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEV 167

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ EDLRI+T 
Sbjct: 168 KGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQEDLRIETM 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ ER R+ 
Sbjct: 228 RAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAERQRVD 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL  
Sbjct: 288 AARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTT 347

Query: 303 QQEMDAIASFGST 315
           + +   +A  G+ 
Sbjct: 348 EHQAAQLAEQGAA 360


>gi|260576769|ref|ZP_05844754.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
 gi|259021021|gb|EEW24332.1| peptide chain release factor 1 [Rhodobacter sp. SW2]
          Length = 351

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 154/324 (47%), Positives = 222/324 (68%), Gaps = 18/324 (5%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKR----------------L 48
           +E+ +  +E   LK ++ E S  +  LD   +   L  D E R                L
Sbjct: 28  AEIASLSREYTDLKPVVAEISAYRRALDDLAQAEALLADPEMRPLAEEELPSLKARIPEL 87

Query: 49  QSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVT 108
           +  L  +LLPKD AD R  ILE+R GTGG+EA+LFA D+ +MY+RY++ +GW+FE++   
Sbjct: 88  EQALRLALLPKDAADARPAILEIRPGTGGDEAALFAADLLRMYQRYAESQGWRFEIIDQQ 147

Query: 109 ESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV 168
           +SDL G ++ +  + G GV+ KLK+ESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EV
Sbjct: 148 DSDLGGIRDVTVHVQGAGVFAKLKYESGVHRVQRVPETESQGRVHTSAATVAVLPEAEEV 207

Query: 169 DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKV 228
           D+ +   D+RIDT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   ++SQH N+  A++V
Sbjct: 208 DLDIPASDIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIVT-SAQKSQHRNRDLAMQV 266

Query: 229 LCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMM 288
           L A+LY++ER+R+  +R+  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M
Sbjct: 267 LRARLYDLERARVDGARAADRKAQVGSGDRSERIRTYNFPQGRLTDHRINLTLYALPQIM 326

Query: 289 EGENLDIFIDALLLQQEMDAIASF 312
            G +L   IDAL+ Q + D +A  
Sbjct: 327 AG-DLGGVIDALVAQDQADKLAEM 349


>gi|301094068|ref|XP_002997878.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
 gi|262109801|gb|EEY67853.1| peptide chain release factor 1 [Phytophthora infestans T30-4]
          Length = 366

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 155/307 (50%), Positives = 227/307 (73%), Gaps = 7/307 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYEC--SEDKDMLD---MATEELCLAIDEEKRLQSLLLKSLLP 58
           + EL++++K ++ L  +I E   S++ D L+   MA EE    ++    L+  +++ +LP
Sbjct: 52  VRELQSQEKAVEELDEMINEQADSDEPDALELRHMAEEERRELLEAIINLEGEVVRLMLP 111

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D+AD++  ILE+RAG+GG+EA LFA D+ KMY++ +  KGWKFE++ ++E+DL G KE 
Sbjct: 112 RDEADDKSSILEIRAGSGGDEACLFAGDILKMYQKVALAKGWKFELMSISETDLGGVKEC 171

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
             +++G G YG++KFESG+HRVQRVP+ +   RVHTSAVSV +LP+A+EV+V +  +DLR
Sbjct: 172 VCSLTGRGAYGRMKFESGVHRVQRVPVNDV--RVHTSAVSVVVLPEAEEVEVEIDPKDLR 229

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           ID YR+ G+GGQH NTT SAVR+THIPTG+  ++QDERSQH NKAKALK+L A++++  R
Sbjct: 230 IDVYRASGAGGQHVNTTESAVRITHIPTGIVAAVQDERSQHQNKAKALKILRARVFDGIR 289

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            +    R  +R+ Q+GSGDRSER+RTYNFPQ RV+DHRV +T   I  M+ GE LD  +D
Sbjct: 290 RKRDAERQTMRNSQVGSGDRSERVRTYNFPQSRVSDHRVNVTVFGIERMLNGELLDEIVD 349

Query: 299 ALLLQQE 305
           AL++ ++
Sbjct: 350 ALVVDEQ 356


>gi|147679165|ref|YP_001213380.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
 gi|189039982|sp|A5CYC3.1|RF1_PELTS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|146275262|dbj|BAF61011.1| protein chain release factor A [Pelotomaculum thermopropionicum SI]
          Length = 349

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 153/292 (52%), Positives = 213/292 (72%), Gaps = 2/292 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           KEI    +L+ E   D+D+ +MA  EL    +++  L++ L   LLPKD  DE++ ILE+
Sbjct: 56  KEIQDTIALMKE-EPDEDLREMAQAELDELTEKKDNLENRLKMLLLPKDPNDEKNVILEI 114

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGGEEA+LFA D+F+MY RY++++GW+ E++    +D+ G+KE  + I G GVY ++
Sbjct: 115 RAGTGGEEAALFAADLFRMYSRYAERQGWRTEILDANYTDIGGFKEVISLIEGKGVYSRM 174

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQR+P TE  GR+HTSA +VA+LP+A+EVDV++  +DLRID + S G GGQ 
Sbjct: 175 KFESGVHRVQRIPTTESGGRIHTSAATVAVLPEAEEVDVQIDPDDLRIDVFCSSGHGGQS 234

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT SAVR+THIPTG+ +S+QDE+SQH NK KA+KVL A+L +  +       +  R  
Sbjct: 235 VNTTQSAVRITHIPTGIVVSMQDEKSQHKNKEKAMKVLRARLLDRVQQEHQQKIASTRKS 294

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            +G+GDRSERIRTYNFPQ RVTDHRVG+T H +  +++G +LD  ID L+L+
Sbjct: 295 MVGTGDRSERIRTYNFPQNRVTDHRVGLTLHRLDSVLDG-DLDEIIDTLILK 345


>gi|162138527|ref|YP_483698.2| peptide chain release factor 1 [Rhodopseudomonas palustris HaA2]
 gi|119361590|sp|Q2J423.2|RF1_RHOP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 361

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 150/311 (48%), Positives = 219/311 (70%), Gaps = 2/311 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +   R  + E+  +  L+ + + D +M  MA  E   L    E  +Q + + +LLPKD  
Sbjct: 49  VKAYREVRDELGDIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRV-ALLPKDAM 107

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER+ +LE+RAGTGG+EASLFA D+F+MYE+++  +GW  EV+  +E  + G+KE  A +
Sbjct: 108 DERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEV 167

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ +EVDV ++ +DL+IDT 
Sbjct: 168 KGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKPDDLKIDTM 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ E+ RI 
Sbjct: 228 RAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRID 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +RS  R +++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL  
Sbjct: 288 SARSAERKQKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTT 347

Query: 303 QQEMDAIASFG 313
           + ++  +A+ G
Sbjct: 348 EHQVAQLAAQG 358


>gi|294678208|ref|YP_003578823.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
 gi|294477028|gb|ADE86416.1| peptide chain release factor 1 [Rhodobacter capsulatus SB 1003]
          Length = 351

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 158/314 (50%), Positives = 219/314 (69%), Gaps = 8/314 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+LR    EI   +  + + +E      D +M  +A EEL         ++  L  +LLP
Sbjct: 38  SDLRPVVTEIAAYRQSLDDLAEAEGWLSDPEMKTLAEEELPRLKARIPAMEQALRLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  ILE+R GTGGEEA+LFA D+++MYER+++K GW+FE +  T ++L G KEA
Sbjct: 98  KDAADARPAILEIRPGTGGEEAALFAHDLWRMYERHAEKMGWRFERLEFTATELGGVKEA 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I G GV+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   D+R
Sbjct: 158 MARIEGEGVFARLKYESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEVDIDIPAADIR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+A A+ VL A+LYE+ER
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHQNRANAMAVLRARLYEIER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            R+   R++ R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  ++ G +L   ID
Sbjct: 277 ERLATERAENRRSQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQILAG-DLGEVID 335

Query: 299 ALLLQQEMDAIASF 312
           AL+   +   +A  
Sbjct: 336 ALVAHDQAAKLAEM 349


>gi|254780874|ref|YP_003065287.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040551|gb|ACT57347.1| peptide chain release factor 1 [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 357

 Score =  317 bits (811), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 163/303 (53%), Positives = 224/303 (73%), Gaps = 5/303 (1%)

Query: 10  KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKR-LQSLLLKSLLPKDDADERDCI 68
           KQ+E D L ++I + + D ++ D+A  E+ LAI++E R L++ +   LLPKD  D++ CI
Sbjct: 56  KQEEQD-LHTVIGDHNSDSEIRDLAQIEV-LAIEKEIRELENEINYLLLPKDTDDDKSCI 113

Query: 69  LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 128
           LE+RAGTGG EA+LF  D+F+MYERY+  + WK EV+  +++D  GYKE  A ISG GV+
Sbjct: 114 LEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVF 173

Query: 129 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 188
            ++KFESG+HRVQRVP TE SGRVHTSA +VA+LP+A E+DV +  ED+RIDT R+ GSG
Sbjct: 174 SRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSG 233

Query: 189 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKL 248
           GQH NTT+SAVR+THIPTG+ ++   E+SQH N+ +A+KVL A+LY++ER R+   RS  
Sbjct: 234 GQHVNTTDSAVRITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSAN 292

Query: 249 RSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDA 308
           R  QIGSGDRSERIRTYNF QGR+TDHR+ +T + +  +++G  +D  I+ LL   +   
Sbjct: 293 RKLQIGSGDRSERIRTYNFSQGRITDHRINLTLYKLEYVLQG-YIDDIINPLLTAHQAKM 351

Query: 309 IAS 311
           I S
Sbjct: 352 IGS 354


>gi|449108520|ref|ZP_21745162.1| peptide chain release factor 1 [Treponema denticola ATCC 33520]
 gi|448961321|gb|EMB42026.1| peptide chain release factor 1 [Treponema denticola ATCC 33520]
          Length = 361

 Score =  317 bits (811), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 154/292 (52%), Positives = 217/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DTELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+EV+ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEVLSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G  LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDAVMQG-ALDELIDALCI 344


>gi|212703639|ref|ZP_03311767.1| hypothetical protein DESPIG_01684 [Desulfovibrio piger ATCC 29098]
 gi|212672934|gb|EEB33417.1| peptide chain release factor 1 [Desulfovibrio piger ATCC 29098]
          Length = 356

 Score =  317 bits (811), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 149/256 (58%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD  DE++ ILE+RAGTGGEEA+LFA D+F+MY RY++ KGWK E++  + SD  GY
Sbjct: 98  LLPKDPLDEKNTILEIRAGTGGEEAALFAADLFRMYTRYAEIKGWKVEIMSESPSDSGGY 157

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE    ISG  VY  LKFE+G HRVQRVP TE  GR+HTSA +VA++P+A+EVDV +R E
Sbjct: 158 KEIICLISGDRVYSHLKFEAGTHRVQRVPATETQGRIHTSAATVAVMPEAEEVDVEIRPE 217

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRID YR+ G+GGQH N T SAVR+THIPTG  ++ QDERSQH NKA+A+KVL +++  
Sbjct: 218 DLRIDIYRASGAGGQHVNKTESAVRITHIPTGTVVTCQDERSQHKNKARAMKVLASRILA 277

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            ER R +   S  R  Q+GSGDRSERIRTYNFPQGR TDHR+ +T +++  +MEGE   +
Sbjct: 278 AERERQNSELSADRKAQVGSGDRSERIRTYNFPQGRCTDHRINLTLYSLDRIMEGEVEPL 337

Query: 296 FIDALLLQQEMDAIAS 311
           F +AL    + +A+ +
Sbjct: 338 F-EALATAAQTEALKA 352


>gi|114777343|ref|ZP_01452340.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
 gi|114552125|gb|EAU54627.1| peptide chain release factor 1 [Mariprofundus ferrooxydans PV-1]
          Length = 357

 Score =  316 bits (810), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 150/287 (52%), Positives = 210/287 (73%), Gaps = 4/287 (1%)

Query: 25  SEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           +E K+M +    E+  AI       S+LL   LPKD  D RD ILE+RAGTGG+EA+LFA
Sbjct: 72  AELKEMAEAEAREIKQAISASDAALSMLL---LPKDPNDNRDVILEIRAGTGGDEAALFA 128

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ +G+K E++  +++ + GYKE  A ISG GV+ + KFESG HRVQRVP
Sbjct: 129 ADLFRMYSRYAETQGYKVEILSASDTGIGGYKEIIAQISGNGVFSRFKFESGAHRVQRVP 188

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
            TE  GR+HTSA +VAILP A+EVD+ +R EDLRID YR+ G+GGQH N T SAVR+THI
Sbjct: 189 ETESGGRIHTSACTVAILPVAEEVDINIRPEDLRIDVYRASGAGGQHVNKTESAVRITHI 248

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           P+G+ ++ QD+ SQH NKA+A+KVL A+L++ E+S +   RS+ R   +GSGDRSERIRT
Sbjct: 249 PSGLVVTCQDQASQHKNKAQAMKVLQARLFDKEQSELDAERSQARKGMVGSGDRSERIRT 308

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           YN+PQGR+TDHR+G+T + +  ++ G ++   +DAL+   + + +A+
Sbjct: 309 YNYPQGRITDHRIGLTLYKLEQIL-GGDMGELLDALITYHQAELLAA 354


>gi|86570230|gb|ABD04787.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris HaA2]
          Length = 373

 Score =  316 bits (810), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 150/311 (48%), Positives = 219/311 (70%), Gaps = 2/311 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +   R  + E+  +  L+ + + D +M  MA  E   L    E  +Q + + +LLPKD  
Sbjct: 61  VKAYREVRDELGDIDDLLEDPATDPEMRAMAEAERDALDAHREDLIQQIRV-ALLPKDAM 119

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER+ +LE+RAGTGG+EASLFA D+F+MYE+++  +GW  EV+  +E  + G+KE  A +
Sbjct: 120 DERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGFKEIIAEV 179

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ +EVDV ++ +DL+IDT 
Sbjct: 180 KGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKPDDLKIDTM 239

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ E+ RI 
Sbjct: 240 RAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRID 299

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +RS  R +++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL  
Sbjct: 300 SARSAERKQKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTT 359

Query: 303 QQEMDAIASFG 313
           + ++  +A+ G
Sbjct: 360 EHQVAQLAAQG 370


>gi|297182635|gb|ADI18793.1| protein chain release factor a [uncultured SAR11 cluster bacterium
           HF4000_37C10]
          Length = 358

 Score =  316 bits (810), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 152/302 (50%), Positives = 213/302 (70%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +KE   L+ +I +   DKD++++A  EL     + +  + +L   LLPKD+AD ++ ILE
Sbjct: 55  KKEQAELEKIIEDKKSDKDIIELAKNELIQLSKKREENEKILKVYLLPKDEADSKNAILE 114

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG EA+LF  D++KMYER    K W FE++ +++S+  G+KE    I G  +Y  
Sbjct: 115 IRAGTGGLEATLFVADLYKMYERVCLNKKWSFEIINLSKSEAGGFKEVILLIKGTNIYSF 174

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           LKFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+E+DV +  +DLRID +RS G GGQ
Sbjct: 175 LKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEEIDVNINEKDLRIDVFRSSGPGGQ 234

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+TH+PTG+ +S QDE+SQH N+AKA+K+L +++Y+ ER +    RSK R 
Sbjct: 235 SVNTTDSAVRITHLPTGIVVSQQDEKSQHKNRAKAMKILRSRVYDAEREKKDKKRSKDRK 294

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            QIGSGDRSERIRTYNFPQ RVTDHR+ +T H + + + G+  + F   L +Q +   +A
Sbjct: 295 NQIGSGDRSERIRTYNFPQSRVTDHRINLTIHKLQEFLNGDAFEEFGRNLRIQDQEIKLA 354

Query: 311 SF 312
           + 
Sbjct: 355 NL 356


>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus marinus MC-1]
 gi|226739111|sp|A0LDT7.1|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus
           marinus MC-1]
          Length = 361

 Score =  316 bits (810), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 210/294 (71%), Gaps = 1/294 (0%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEE 79
           ++ E  +D +M  MA EE     ++ ++ Q  L   LLPKD  D+++ ILE+RAGTGGEE
Sbjct: 66  MLAEAGDDAEMRQMAREERETLKNKLEQSQKHLHLMLLPKDPNDDKNVILEIRAGTGGEE 125

Query: 80  ASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHR 139
           A+LF  D+F+MY R+++ KGW+ E++  + +DL GYKE  A + G G Y  LK+ESG+HR
Sbjct: 126 AALFVSDLFRMYGRFAEIKGWRIEMLSSSATDLGGYKELIAMVQGKGAYMGLKYESGVHR 185

Query: 140 VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAV 199
           VQR+P+TE  GR+HTSAV+VAILP+ADEV++ + ++DLRID YRS G GGQ  NTT+SAV
Sbjct: 186 VQRIPVTETGGRIHTSAVTVAILPEADEVELHIEDKDLRIDVYRSSGPGGQSVNTTDSAV 245

Query: 200 RVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRS 259
           R+TH+PTG+ +  QDE+SQH NKAKA+KVL A+L + ++      R++ R  Q+GSGDRS
Sbjct: 246 RITHLPTGLVVICQDEKSQHKNKAKAMKVLQARLLDAQQQAADSQRAEARKGQVGSGDRS 305

Query: 260 ERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           ERIRTYNFPQ RVTDHR+ +T H +  +++G  L   +DAL    +   +A  G
Sbjct: 306 ERIRTYNFPQSRVTDHRINLTLHKLDQVLQG-GLAEVVDALTAHDQASKLAHLG 358


>gi|119383645|ref|YP_914701.1| peptide chain release factor 1 [Paracoccus denitrificans PD1222]
 gi|166223583|sp|A1B0G1.1|RF1_PARDP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119373412|gb|ABL69005.1| bacterial peptide chain release factor 1 (bRF-1) [Paracoccus
           denitrificans PD1222]
          Length = 351

 Score =  316 bits (810), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 223/310 (71%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I++ R+ Q++I   ++++     D +M ++A +EL         L+  L  +LLP+D AD
Sbjct: 47  IAQWRSVQEDIRQAQAMLA----DHEMRELAQDELSRLRAGLPALEHALRVALLPRDAAD 102

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  ILE+R GTGGEEA+LFA D+  MY R+++ +GW+F+++ +  SDL G +EA A I 
Sbjct: 103 ARPAILEIRPGTGGEEAALFAGDLLDMYRRFAESQGWQFQMLELVRSDLGGVREAMARIE 162

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVDV +   D+RIDT R
Sbjct: 163 GEGVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEEVDVDIPAADIRIDTMR 222

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+A A+ VL A+LY+MERSR   
Sbjct: 223 ASGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRANAMAVLRARLYDMERSRADA 281

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
            R+  R  Q+GSGDRSERIRTYNFPQGR+TDHR+G+T +A+  +M+GE  +I ++AL   
Sbjct: 282 ERAADRKSQVGSGDRSERIRTYNFPQGRMTDHRIGLTLYALDRIMQGEIGEI-VEALAAH 340

Query: 304 QEMDAIASFG 313
            +   +A+ G
Sbjct: 341 DQAARLAAQG 350


>gi|296775701|gb|ADH42977.1| protein chain release factor A [uncultured SAR11 cluster alpha
           proteobacterium H17925_38M03]
          Length = 358

 Score =  316 bits (810), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 144/298 (48%), Positives = 214/298 (71%)

Query: 17  LKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           L++++ + + D +M+D+A ++L       ++ ++ L   LLPKD+ D+++ I+E+RAGTG
Sbjct: 61  LENIVKDKTNDPEMIDLAEKDLSELFKRREKWENDLKIFLLPKDEDDDKNAIVEIRAGTG 120

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G EASLF  D+FKMYE+   KK W  E++ +++S+  G+KE   +++G  +Y  LK+ESG
Sbjct: 121 GLEASLFCADLFKMYEKVCSKKKWNLEIINISKSEAGGFKEVIFSVNGNDIYSYLKYESG 180

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
           +HRVQR+P TE  GRVHTSA +VA+LP+ +EVD+ ++  DLR+D +R+GG GGQ  NTT+
Sbjct: 181 VHRVQRIPETETQGRVHTSAATVAVLPEVEEVDIEIKESDLRVDVFRAGGPGGQSVNTTD 240

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVR+THIP+G+ +S QDE+SQH NKAKALK+L +++YE E+ +    RS  R  QIGSG
Sbjct: 241 SAVRITHIPSGVVVSQQDEKSQHKNKAKALKILRSRVYEAEKRKKDQERSSNRRSQIGSG 300

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           DRSERIRTYNFPQGRVTDHR+ +T H + + + G+  +     L LQ++   + +  S
Sbjct: 301 DRSERIRTYNFPQGRVTDHRINLTLHKLEEFLSGDIHEEMNQELRLQEQNLKLKNLNS 358


>gi|269102026|ref|ZP_06154723.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161924|gb|EEZ40420.1| peptide chain release factor 1 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 362

 Score =  316 bits (810), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 210/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL+  L   L+PKD  DER+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKEAKAEIERLEDELQVLLIPKDPNDERNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++++GW+ EV+   +++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAERRGWRIEVMSANDAEHGGYKEMIAKVTGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA+LP+  E ++  +   DL+IDTYRS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVLPEIPEAEIPEINPSDLKIDTYRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + H   +  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++D  I  +L++ + D +A+  
Sbjct: 312 YNYPQGRVSDHRITLTIYRLNEVMEG-DVDCLIQPVLVEYQADQLAAMA 359


>gi|449127508|ref|ZP_21763781.1| peptide chain release factor 1 [Treponema denticola SP33]
 gi|448944241|gb|EMB25122.1| peptide chain release factor 1 [Treponema denticola SP33]
          Length = 361

 Score =  316 bits (810), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 153/292 (52%), Positives = 217/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K+I+  K LI E S D ++ +MA EEL       ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EKQIEDSKLLIQEES-DAELKEMAREELHSLEAAFEKSEADLKMLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+F+MY  Y++ K WK+E++ + E++L GYKE + +ISG  VYG 
Sbjct: 114 IRGGTGGDEAALFAADLFRMYTHYAEMKNWKYEILSLNETELGGYKEITFSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ +  EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIEINQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY++E S+    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDLEESKKQAERAQNRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +M+G  LD  IDAL +
Sbjct: 294 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDAVMQG-ALDELIDALCI 344


>gi|194290876|ref|YP_002006783.1| peptide chain release factor 1 [Cupriavidus taiwanensis LMG 19424]
 gi|238692779|sp|B3R722.1|RF1_CUPTR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|193224711|emb|CAQ70722.1| peptide chain release factor RF-1 [Cupriavidus taiwanensis LMG
           19424]
          Length = 360

 Score =  316 bits (810), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 6/310 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           S+ R  Q ++   ++L+    +D +M D A +E+  A D  + LQ+ L + LLPKD  D+
Sbjct: 53  SQYRQAQDDLATAQALL----DDPEMKDFAADEIAAARDRLEALQASLQRLLLPKDPNDD 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+ +LE+RAGTGGEE++LFA D+ +MY RY++++ W+ EV+  +ESDL GYKE    I+G
Sbjct: 109 RNLLLEIRAGTGGEESALFAADLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIIRIAG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYR 183
              + +LKFESG HRVQRVP TE  GR+HTSA +VA++P+ADEV +V +   DLRIDT+R
Sbjct: 169 DAAFSRLKFESGGHRVQRVPATEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T+SAVR+TH+PTG+ +  QD+RSQH NK KA+KVL A++ +M+      
Sbjct: 229 ASGAGGQHVNKTDSAVRLTHLPTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
             +  R   IGSGDRS+RIRTYNFPQGRVTDHR+ +T + I  +M+G ++D  + AL  +
Sbjct: 289 REASTRRNLIGSGDRSDRIRTYNFPQGRVTDHRINLTLYKIDMIMDG-DMDELLSALSAE 347

Query: 304 QEMDAIASFG 313
            + D +A+ G
Sbjct: 348 HQADQLAALG 357


>gi|392940166|ref|ZP_10305810.1| LOW QUALITY PROTEIN: peptide chain release factor 1
           [Thermoanaerobacter siderophilus SR4]
 gi|392291916|gb|EIW00360.1| LOW QUALITY PROTEIN: peptide chain release factor 1
           [Thermoanaerobacter siderophilus SR4]
          Length = 356

 Score =  316 bits (809), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 153/302 (50%), Positives = 219/302 (72%), Gaps = 3/302 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           ++I+  K L+   S D+++ +MA EEL    +++K+L   +   L+PKD  DE++ I+E+
Sbjct: 56  EDIEATKELL--SSNDEELKEMAGEELSQLEEKKKKLLEEIKILLIPKDPNDEKNVIMEI 113

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE    ISG G Y +L
Sbjct: 114 RAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKEVILNISGKGAYSRL 173

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D++ID +RSGG GGQ 
Sbjct: 174 KYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPSDIKIDVFRSGGHGGQS 233

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM         ++ R  
Sbjct: 234 VNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMALQEQQREIAETRKS 293

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++G +LD  IDAL+L  + + + +
Sbjct: 294 QVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDG-DLDEIIDALILNDQAEKLKN 352

Query: 312 FG 313
             
Sbjct: 353 MN 354


>gi|218886539|ref|YP_002435860.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|226739101|sp|B8DLL6.1|RF1_DESVM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63852197|dbj|BAD98449.1| peptide release factor 1 [Desulfovibrio vulgaris]
 gi|218757493|gb|ACL08392.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 357

 Score =  316 bits (809), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 162/307 (52%), Positives = 220/307 (71%), Gaps = 9/307 (2%)

Query: 18  KSLIYECSEDKDMLDMATEEL-CLAIDEEKRLQSLLLK-------SLLPKDDADERDCIL 69
           K L    +++K++LD A  E+  +A +E K L+S + +        LLPKD  DE++ I+
Sbjct: 52  KELRQNLADNKELLDDADPEIRSMAHEEAKSLESAIPEIEQELQLLLLPKDPLDEKNTIV 111

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           E+RAGTGGEEA+LFA D+F+MY RY++ +GWK E++   ESD  GYKE  A I G  VY 
Sbjct: 112 EIRAGTGGEEAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEVIALIVGDKVYS 171

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 189
           +LKFESG HRVQRVP TE  GR+HTSA +VAILP+A+EVDV +R +D+RID +R+ G+GG
Sbjct: 172 RLKFESGTHRVQRVPATESQGRIHTSAATVAILPEAEEVDVEIRPDDIRIDVFRASGAGG 231

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T SAVR+TH+P+G+ +S QDE+SQH NKAKA+KVL ++L + E+ R H   +  R
Sbjct: 232 QHVNKTESAVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADR 291

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
             Q+GSGDRSERIRTYNFPQGRVTDHR+ +T +++  +MEGE   +F DAL    + +A+
Sbjct: 292 RSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLDRVMEGEAQALF-DALSTHAQTEAL 350

Query: 310 ASFGSTQ 316
            +    Q
Sbjct: 351 KAQADVQ 357


>gi|420254153|ref|ZP_14757170.1| peptide chain release factor 1 [Burkholderia sp. BT03]
 gi|398049844|gb|EJL42242.1| peptide chain release factor 1 [Burkholderia sp. BT03]
          Length = 398

 Score =  316 bits (809), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/294 (52%), Positives = 209/294 (71%), Gaps = 2/294 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  A D+ ++L+  L K LLPKD  DER+  LE+RAGTGG+E++L
Sbjct: 105 ELLSDASMKDFAEEEIRAARDQMEKLEGELQKMLLPKDPNDERNIFLEIRAGTGGDESAL 164

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E++  +ESDL GYKE    I+G   Y KLKFESG HRVQR
Sbjct: 165 FAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGDAAYSKLKFESGGHRVQR 224

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 225 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 284

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 285 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 344

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           IRTYNFPQGR+TDHR+ +T + +  +MEG +LD  I AL+ + + + +AS G T
Sbjct: 345 IRTYNFPQGRLTDHRINLTLYRLEALMEG-DLDELIAALVSEHQAELLASLGDT 397


>gi|302339534|ref|YP_003804740.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
 gi|301636719|gb|ADK82146.1| peptide chain release factor 1 [Spirochaeta smaragdinae DSM 11293]
          Length = 355

 Score =  316 bits (809), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 156/286 (54%), Positives = 210/286 (73%), Gaps = 9/286 (3%)

Query: 21  IYECSEDKDMLDMATEELCLAIDE----EKRLQSLLLKSLLPKDDADERDCILEVRAGTG 76
           + E   D +M +MA  EL    D     EKRL++LL+    PKD  D ++ I+E+RAGTG
Sbjct: 64  LLESESDHEMREMAEVELEELKDHLEKSEKRLKTLLV----PKDPLDGKNTIIEIRAGTG 119

Query: 77  GEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESG 136
           G+EASLFA D+++MY R+S++KGWK E++  +++++ G+KE   +ISG  VYG L++ESG
Sbjct: 120 GDEASLFAADLYRMYSRFSEQKGWKLEMMESSDTEVGGFKEVIFSISGKEVYGNLRYESG 179

Query: 137 IHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTN 196
           +HRVQRVP TE  GR+HTSAV+VA+LP+A++ D+ +  EDL+ID +RS G GGQ  NTT+
Sbjct: 180 VHRVQRVPSTESQGRIHTSAVTVAVLPEAEKTDIDISPEDLKIDVFRSSGPGGQSVNTTD 239

Query: 197 SAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSG 256
           SAVRVTHIPTG+ ++ QDE+SQ  NKAKAL+VL A+LYE E  +    R + R  QIGSG
Sbjct: 240 SAVRVTHIPTGVVVTCQDEKSQLKNKAKALRVLRARLYEAEEMKQRKERDQARKSQIGSG 299

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           DRSERIRTYNFPQ RVTDHR+ +T + +  +MEG  L+  IDAL L
Sbjct: 300 DRSERIRTYNFPQNRVTDHRINLTLYKLDQVMEG-ALNELIDALKL 344


>gi|332298739|ref|YP_004440661.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
 gi|332181842|gb|AEE17530.1| Peptide chain release factor 1 [Treponema brennaborense DSM 12168]
          Length = 359

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 149/286 (52%), Positives = 208/286 (72%), Gaps = 1/286 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM +MA EEL         ++S L   L+P D  +E++ I+E+R G GG+EASLFA 
Sbjct: 69  DDHDMKEMAREELKALESRVPEMESALKMLLIPPDPLEEKNIIMEIRGGAGGDEASLFAA 128

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K WK+E++  +E+++ GYKE S +ISG  VYG L++E G+HRVQRVP 
Sbjct: 129 DLFRMYTRYAEIKNWKYEIMDASETEVGGYKEISFSISGKFVYGSLRWEGGVHRVQRVPE 188

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSAV+VA+LP+A+E ++ +R EDLR+D  R+GG GGQ  NTT+SAVR+TH+P
Sbjct: 189 TEAQGRIHTSAVTVAVLPEAEETEIEIRPEDLRVDVMRAGGPGGQCVNTTDSAVRLTHLP 248

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDE+SQ  NKAKA++VL A+L+++E S+    RS  R   +GSGDRSERIRTY
Sbjct: 249 TGLVVIQQDEKSQIKNKAKAMRVLRARLFDLEESKKQAERSAARKSMVGSGDRSERIRTY 308

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           NFPQ RVTDHR+ +T + +   M+G NLD  +DAL +  +  A+ S
Sbjct: 309 NFPQNRVTDHRINLTLYKLDQFMQG-NLDEMLDALNISAKEAALKS 353


>gi|170723617|ref|YP_001751305.1| peptide chain release factor 1 [Pseudomonas putida W619]
 gi|229470352|sp|B1JEP6.1|RF1_PSEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169761620|gb|ACA74936.1| peptide chain release factor 1 [Pseudomonas putida W619]
          Length = 360

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/309 (49%), Positives = 220/309 (71%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D DM +MA EE+  A ++   L+S L + LLPKD  D R
Sbjct: 54  EWRKVQDDLEGAQALLKDA--DPDMREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DTYR+
Sbjct: 172 SVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + 
Sbjct: 292 IASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|15606216|ref|NP_213594.1| peptide chain release factor 1 [Aquifex aeolicus VF5]
 gi|6225940|sp|O67032.1|RF1_AQUAE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2983407|gb|AAC06991.1| peptide chain release factor RF-1 [Aquifex aeolicus VF5]
          Length = 362

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/298 (51%), Positives = 215/298 (72%), Gaps = 3/298 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L    +  QKE+   K L+   S DKD+ ++A EE+    +E K+L+  L   L+PKD  
Sbjct: 52  LYERYKKAQKELKEAKELL--KSSDKDLRELAEEEVNRLTEEMKKLEEELKVHLVPKDPN 109

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D ++ ILE+RAG GGEEA+LFA D+F+MY++Y+++KGWK  ++   ++ L GYKE  A I
Sbjct: 110 DTKNVILEIRAGAGGEEAALFAADLFRMYQKYAEEKGWKVSILSSNKTGLGGYKEVIALI 169

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LK+ESG+HRVQRVP+TE SGR+HTS  +VA+LP+ DE D++++ E+L+I+T+
Sbjct: 170 EGEGAYSRLKYESGVHRVQRVPVTESSGRIHTSTATVAVLPEVDETDIKIKPEELKIETF 229

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQ+ NTT +AVR+THIPTG+ +  QDERSQ  NK KALK+L AKL +    +  
Sbjct: 230 RASGAGGQYVNTTETAVRITHIPTGIVVQCQDERSQFQNKQKALKILYAKLKDYYERKKQ 289

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
              +K R EQ+G+G+RSE+IRTYNFPQ RVTDHR+ +T + + D++EG  LD  IDAL
Sbjct: 290 EEIAKERKEQVGTGERSEKIRTYNFPQNRVTDHRINLTLYKLQDVLEG-KLDEIIDAL 346


>gi|354595368|ref|ZP_09013401.1| peptide chain release factor 1 [Commensalibacter intestini A911]
 gi|353671278|gb|EHD12984.1| peptide chain release factor 1 [Commensalibacter intestini A911]
          Length = 360

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/286 (51%), Positives = 211/286 (73%), Gaps = 1/286 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M D+A  EL    ++  +L+  +  S+LPKD ADE + ILE+R   GG+EA +FA 
Sbjct: 72  QDPEMKDLAEAELEALNEKIPQLRHDIRLSMLPKDKADEGNAILEIRPAAGGDEAGIFAA 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F  Y+RYS   GW+FEV+   ++ + G K A A+ISG  V+ +LK+ESG+HRVQRVP 
Sbjct: 132 ELFGAYQRYSDMNGWRFEVMEYDDTGVGGIKGAMASISGNNVFARLKYESGVHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTS V+VA+LP+A+EVDV +  +DLRID YR+ G+GGQH N T SAVR+TH+P
Sbjct: 192 TESQGRIHTSTVTVAVLPEAEEVDVDIDEKDLRIDVYRASGAGGQHVNKTESAVRITHMP 251

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           +G+ +++Q+E+SQH NKAKA+K+L A+LYE +R+ +H  R+  R  Q+G+GDRSERIRTY
Sbjct: 252 SGVVVAMQEEKSQHKNKAKAMKILRARLYEQQRASLHADRAADRRSQVGTGDRSERIRTY 311

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           NFPQGRVTDHR+ +T H I  +M GE LD  +D+L  +++   +A+
Sbjct: 312 NFPQGRVTDHRINLTLHKIDRIMLGE-LDEVVDSLAQEEQSRLLAA 356


>gi|125975076|ref|YP_001038986.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
           27405]
 gi|256003270|ref|ZP_05428262.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281418506|ref|ZP_06249525.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|385777561|ref|YP_005686726.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
 gi|419722892|ref|ZP_14250029.1| Peptide chain release factor 1 [Clostridium thermocellum AD2]
 gi|419726392|ref|ZP_14253415.1| Peptide chain release factor 1 [Clostridium thermocellum YS]
 gi|166223552|sp|A3DIL4.1|RF1_CLOTH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|125715301|gb|ABN53793.1| peptide chain release factor 1 [Clostridium thermocellum ATCC
           27405]
 gi|255992961|gb|EEU03051.1| peptide chain release factor 1 [Clostridium thermocellum DSM 2360]
 gi|281407590|gb|EFB37849.1| peptide chain release factor 1 [Clostridium thermocellum JW20]
 gi|316939241|gb|ADU73275.1| peptide chain release factor 1 [Clostridium thermocellum DSM 1313]
 gi|380770444|gb|EIC04341.1| Peptide chain release factor 1 [Clostridium thermocellum YS]
 gi|380781272|gb|EIC10933.1| Peptide chain release factor 1 [Clostridium thermocellum AD2]
          Length = 360

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 148/276 (53%), Positives = 204/276 (73%), Gaps = 1/276 (0%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           +E +   KEI   K ++ E   DK+  +M   EL  A ++ + L+  +   LLPKD  DE
Sbjct: 49  NEYKKLTKEIADAKEMLNE-KLDKEFREMVETELKEAQEKLEVLKKEMKILLLPKDPNDE 107

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+ I+E+R G GG+EA+LFA D+F+MY RY+++ GWK E++    +++ G+KE   +I G
Sbjct: 108 RNVIVEIRGGAGGDEAALFAGDLFRMYTRYAERNGWKTEILDSNPTEIGGFKEVVFSIEG 167

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
            G Y +LKFESG+HRVQRVP+TE +GRVHTS V+VA+LP+A+E+DV +   DLRIDTYR+
Sbjct: 168 NGAYSRLKFESGVHRVQRVPVTEANGRVHTSTVTVAVLPEAEEIDVEINPNDLRIDTYRA 227

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  QD+RSQH NK KA+KVL +KLYEM R + H  
Sbjct: 228 SGAGGQHINKTDSAIRITHLPTGLVVCCQDQRSQHKNKEKAMKVLRSKLYEMAREQQHNE 287

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGIT 280
            ++ R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T
Sbjct: 288 IAQERKSQVGTGDRSERIRTYNFPQGRVTDHRIGLT 323


>gi|325273244|ref|ZP_08139524.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
 gi|324101621|gb|EGB99187.1| peptide chain release factor 1 [Pseudomonas sp. TJI-51]
          Length = 360

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 152/309 (49%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D DM +MA EE+  A ++   L++ L + LLPKD  D R
Sbjct: 54  EWRKVQDDLEGAQALLKDS--DPDMREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGE 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GRVHTSA +VA+LP+ DE   + +   DLR+DTYR+
Sbjct: 172 NVYGKLKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + 
Sbjct: 292 IASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|259418822|ref|ZP_05742739.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
 gi|259345044|gb|EEW56898.1| peptide chain release factor 1 [Silicibacter sp. TrichCH4B]
          Length = 444

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 155/315 (49%), Positives = 222/315 (70%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+LR   ++I   + L+ + +E      D DM  +A EE+          +  L  +LLP
Sbjct: 131 SDLRPVAEQIRAYRQLLSDLAEAEEMLADPDMKALAEEEIPTLKAALPEAEHALQLALLP 190

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD+AD R  ILE+R GTGG+EA+LFA D+++MY RY++ +GWK +V+    S+L G KE 
Sbjct: 191 KDEADSRAAILEIRPGTGGDEAALFAGDLYRMYSRYAEAQGWKIDVIEEQVSELGGLKEL 250

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I+G GV+ +LK+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A++VD+++   DLR
Sbjct: 251 VARINGDGVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEDVDIKIDANDLR 310

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 311 IDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKTRLYDLER 369

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M G +LD  ID
Sbjct: 370 QRIDSERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLEQIM-GGDLDEIID 428

Query: 299 ALLLQQEMDAIASFG 313
           AL+ + +   +A  G
Sbjct: 429 ALISEHQAKLLAEMG 443


>gi|192360464|ref|YP_001981172.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
 gi|238692456|sp|B3PJP4.1|RF1_CELJU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|190686629|gb|ACE84307.1| peptide chain release factor 1 [Cellvibrio japonicus Ueda107]
          Length = 360

 Score =  315 bits (808), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/304 (51%), Positives = 217/304 (71%), Gaps = 8/304 (2%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEEL--CLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +I+  K LI E   D DM +MA EEL  C A  E   L+  L K LLPKD  DE++C LE
Sbjct: 61  DIEEAKHLIAEG--DADMREMAEEELEGCEARLEPTELE--LQKLLLPKDPNDEKNCYLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           VRAGTGG+EA++F+ D+F+MY RY++ +GW+ E++  +E +  G+KE  + +SG GVY K
Sbjct: 117 VRAGTGGDEAAIFSGDLFRMYSRYAETQGWRVEILSQSEGEHGGFKEIISLVSGSGVYSK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA++P+ADE++ V +   DLRIDTYR+ G+GG
Sbjct: 177 LKFESGAHRVQRVPETESQGRIHTSACTVAVMPEADELEEVNINKADLRIDTYRASGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+THIPTG+ +  QDERSQH N+A+A+ +L  KL  M+    H S S+ R
Sbjct: 237 QHVNKTDSAIRITHIPTGIVVECQDERSQHKNRARAMSLLATKLKTMQEEAAHKSISEER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYN+PQGRVTDHR+ +T +++  +M+G +L+  I  L  + + D +
Sbjct: 297 RNLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDAVMQG-DLEPVIGPLANEYQADQL 355

Query: 310 ASFG 313
           A+  
Sbjct: 356 AAIA 359


>gi|91974579|ref|YP_567238.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB5]
 gi|119361592|sp|Q13F02.1|RF1_RHOPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91681035|gb|ABE37337.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB5]
          Length = 361

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/310 (47%), Positives = 214/310 (69%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +   R  + E+  + +L+ +   D +M  MA  E          L   +  +LLPKD  D
Sbjct: 49  VKAYREVRDELGDVDALLEDPDTDSEMRAMAEAERDALDAHRAELIQEIRVALLPKDAMD 108

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+ +LE+RAGTGG+EASLFA D+F+MYE+++  +GW  EV+  +E  + G+KE  A + 
Sbjct: 109 ERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGSMGGFKEIIAEVK 168

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ +EVDV ++ +DL+IDT R
Sbjct: 169 GRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKADDLKIDTMR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ E+ R+  
Sbjct: 229 AQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLDA 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL  +
Sbjct: 289 ARSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTE 348

Query: 304 QEMDAIASFG 313
            +   +A+ G
Sbjct: 349 HQAAQLAAQG 358


>gi|441506396|ref|ZP_20988368.1| Peptide chain release factor 1 [Photobacterium sp. AK15]
 gi|441425938|gb|ELR63428.1| Peptide chain release factor 1 [Photobacterium sp. AK15]
          Length = 363

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM +MA EE+  A  E +RL   L   L+PKD  DER+C +E+RAG GG+EA +FA 
Sbjct: 73  DDPDMREMAQEEVKEAKSEIERLADELQVLLIPKDPNDERNCFIEIRAGAGGDEAGIFAG 132

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++ +GW+ EV+   +++  GYKE  A ++G GVYG LKFESG HRVQRVP 
Sbjct: 133 DLFRMYSKYAESRGWRVEVMSANDAEHGGYKEMIAKVNGEGVYGTLKFESGGHRVQRVPA 192

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAILP+  E ++  +   DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 193 TESQGRVHTSACTVAILPEIPEAEIPEINTGDLKIDTFRASGAGGQHVNTTDSAIRITHL 252

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + H   +  R   +GSGDRS+RIRT
Sbjct: 253 PTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGDRSDRIRT 312

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEGE LD  +  +L + + D +A+  
Sbjct: 313 YNYPQGRVSDHRINLTVYRLNEVMEGE-LDCLLQPVLQEHQADQLAAMA 360


>gi|149204050|ref|ZP_01881018.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
 gi|149142492|gb|EDM30537.1| peptide chain release factor 1 [Roseovarius sp. TM1035]
          Length = 417

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 150/297 (50%), Positives = 214/297 (72%), Gaps = 6/297 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I   R    ++DG ++++     D +M D+A EE+ +       ++  L  +LLP+D+AD
Sbjct: 114 IRAYRLAVNDLDGARAMLA----DPEMRDLAREEVAVLEARLPEMEQRLQLALLPRDEAD 169

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R  ILE+R GTGGEEA+LF  D+ +MY+RYS+ +GW FEV+   +S+L G +E    I 
Sbjct: 170 ARPAILEIRPGTGGEEAALFGADLMRMYQRYSEARGWSFEVIEEQQSELGGIRELVVRIG 229

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+++   DLRIDT R
Sbjct: 230 GEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQINANDLRIDTMR 289

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY++ER+R+  
Sbjct: 290 SSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHRNREIAMQVLKTRLYDLERNRVDS 348

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  ++ G +LD  IDAL
Sbjct: 349 ERSANRAAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQVL-GGDLDEVIDAL 404


>gi|304415271|ref|ZP_07395967.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
 gi|304282877|gb|EFL91344.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           LSR1]
          Length = 360

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/305 (50%), Positives = 216/305 (70%), Gaps = 5/305 (1%)

Query: 12  KEIDGLKSLIYECS---EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCI 68
           K+ DGL+  I       +D +M ++A +EL  A    + L+  L   LLP+D  DERDC 
Sbjct: 53  KQWDGLQEDIETAKKMLDDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCF 112

Query: 69  LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 128
           LE+RAGTGG+EA++FA D+F+MY RY++ + WK EV+ + E +  GYKE    I+G GVY
Sbjct: 113 LEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKMEVININEGEKGGYKEVITKITGNGVY 172

Query: 129 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGS 187
           G+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E +V  + + DLRIDT+RS G+
Sbjct: 173 GQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPVLPETEVLEISDNDLRIDTFRSSGA 232

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKA  VL A++ E ER +   +++ 
Sbjct: 233 GGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQAS 292

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LDI I+ ++ + + D
Sbjct: 293 ERRNLLGSGDRSDRSRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDILIEPIVQEYQAD 351

Query: 308 AIASF 312
            +A+ 
Sbjct: 352 QLAAL 356


>gi|46581318|ref|YP_012126.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120601501|ref|YP_965901.1| peptide chain release factor 1 [Desulfovibrio vulgaris DP4]
 gi|387154537|ref|YP_005703473.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
 gi|61214640|sp|Q727E1.1|RF1_DESVH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223554|sp|A1VAK8.1|RF1_DESVV RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46450740|gb|AAS97386.1| peptide chain release factor 1 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120561730|gb|ABM27474.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfovibrio
           vulgaris DP4]
 gi|311234981|gb|ADP87835.1| peptide chain release factor 1 [Desulfovibrio vulgaris RCH1]
          Length = 357

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 151/287 (52%), Positives = 209/287 (72%), Gaps = 9/287 (3%)

Query: 27  DKDMLDMATEEL----CLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           D ++  MA EE+        D E+ L+ LLL    P+D  D+++ +LE+RAGTGGEEASL
Sbjct: 69  DHEIRAMAHEEIKAIEAALPDIEQELKILLL----PRDPMDDKNILLEIRAGTGGEEASL 124

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+F+MY RY++  GWK EV+  ++SD  GYKE  A I+G  VY +LK+ESG HRVQR
Sbjct: 125 FAADLFRMYTRYAEIMGWKVEVLSASDSDTGGYKEIIALIAGDKVYSRLKYESGTHRVQR 184

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VA++P+A+EVDV +R +DLRID YR+ G+GGQH N T SAVR+T
Sbjct: 185 VPATEAQGRIHTSAATVAVMPEAEEVDVDIRPDDLRIDVYRASGAGGQHVNKTESAVRIT 244

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ ++ QDE+SQH NKAKA+KVL +++ + E+ R H   +  R   +GSGDRSERI
Sbjct: 245 HLPTGIVVACQDEKSQHKNKAKAMKVLISRVLQAEQERAHSVIADARRALVGSGDRSERI 304

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           RTYN+PQ R+TDHR+ +T +++  +MEGE L   +DAL+   + +A+
Sbjct: 305 RTYNYPQSRITDHRINLTLYSLDKVMEGE-LAPLVDALVTHAQTEAL 350


>gi|343127515|ref|YP_004777446.1| peptide chain release factor 1 [Borrelia bissettii DN127]
 gi|342222203|gb|AEL18381.1| peptide chain release factor 1 [Borrelia bissettii DN127]
          Length = 357

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 144/291 (49%), Positives = 210/291 (72%), Gaps = 1/291 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEEEDQQEMKELIKQELIDLDKKKEDLEQQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE SGR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESSGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L+++ +   + S
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLMIELQEQTLKS 354


>gi|301060315|ref|ZP_07201178.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
 gi|300445511|gb|EFK09413.1| peptide chain release factor 1 [delta proteobacterium NaphS2]
          Length = 358

 Score =  315 bits (807), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 154/311 (49%), Positives = 223/311 (71%), Gaps = 3/311 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           ++ E +  Q EI   +SL+ +   D ++  +A EE+    D  +R    L   LLPKD  
Sbjct: 49  VLREHQALQDEIAESQSLLQDP--DPEIKKLAKEEIEGLNDRLERTADELTVLLLPKDPN 106

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DE++ +LE+RAGTGGEEA+LFA D+F+MY RY++ + WK E++    + + G+KE    I
Sbjct: 107 DEKNILLEIRAGTGGEEAALFAADLFRMYSRYAELRRWKTEILSQNMTGIGGFKEVIVLI 166

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G  V+ +LK+ESG+HRVQRVP TE  GR+HTSAV+VA+LP+A+EVDV ++ EDLRID Y
Sbjct: 167 EGHRVFSRLKYESGVHRVQRVPETEAQGRIHTSAVTVAVLPEAEEVDVEIKPEDLRIDVY 226

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G GGQH NTT+SAVR+TH+PTG+ ++ QDE+SQH NKAKA+KVL +++ ++E +  H
Sbjct: 227 RSSGHGGQHVNTTDSAVRITHLPTGLVVTCQDEKSQHKNKAKAMKVLRSRMLDLETAHQH 286

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              S+ R   +G+GDRSERIRTYNFPQGRVTDHR+G+T + + D ++G +L++ I+ L+ 
Sbjct: 287 SRISEERKTMVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLDDFLQG-DLNLIIEPLIT 345

Query: 303 QQEMDAIASFG 313
             + +A+ + G
Sbjct: 346 YFQSEALKNSG 356


>gi|126725348|ref|ZP_01741190.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
 gi|126704552|gb|EBA03643.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/302 (51%), Positives = 213/302 (70%), Gaps = 8/302 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECS------EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           SEL+    +I   ++L+ +        +D +M ++A EEL    D     ++ +   LLP
Sbjct: 108 SELKPVADQIMAFQTLVQDIDAAEAMLDDPEMRELAAEELKELRDSLPDAENAIKLVLLP 167

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  I+E+R GTGG+EA+LFA D+ +MY+RY++  GWKFE++    S+L G KE 
Sbjct: 168 KDTADARPAIIEIRPGTGGDEAALFAGDLLRMYQRYAESNGWKFEIIEEQVSELGGIKEI 227

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I G  V+GKLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DLR
Sbjct: 228 IANIKGTNVFGKLKFESGVHRVQRVPTTESGGRIHTSAATVAVLPEAEEVDLDIPASDLR 287

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+TH+PTGM I +  E+SQH N+  A++V+ ++LYEMER
Sbjct: 288 IDTMRASGAGGQHVNTTDSAVRITHLPTGM-IVVSMEKSQHRNREIAMQVMRSRLYEMER 346

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            ++   R+  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M GE LD  ID
Sbjct: 347 QKVADERAADRKSQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDQVMSGE-LDEIID 405

Query: 299 AL 300
           AL
Sbjct: 406 AL 407


>gi|160935042|ref|ZP_02082428.1| hypothetical protein CLOLEP_03918 [Clostridium leptum DSM 753]
 gi|156866495|gb|EDO59867.1| peptide chain release factor 1 [Clostridium leptum DSM 753]
          Length = 358

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 148/284 (52%), Positives = 207/284 (72%), Gaps = 1/284 (0%)

Query: 18  KSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGG 77
           K L+ E   +KD  +M   EL  A +  +++   L   LLPKD  D+R+ I+E+R G GG
Sbjct: 62  KQLLAEGGLEKDFREMVELELEEARESLEKISEELKILLLPKDPNDDRNVIVEIRGGAGG 121

Query: 78  EEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGI 137
           EEA+LF+  +F+MY  Y++ K WK E++   E++L GYKE S  I+G G Y ++K+ESG+
Sbjct: 122 EEAALFSASLFRMYSMYAETKRWKTEILNANETELGGYKEISFMITGEGAYSRMKYESGV 181

Query: 138 HRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNS 197
           HRVQRVP TE  GR+HTS V+VA+LP+A++V+V +   DL+IDT+RSGG+GGQH N T+S
Sbjct: 182 HRVQRVPETETQGRIHTSTVTVAVLPEAEDVEVEINPSDLKIDTFRSGGAGGQHINKTDS 241

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           A+R+TH+PTG+ +  QDERSQ+ NK KA+KVL ++L E ER +     ++ R  Q+G+GD
Sbjct: 242 AIRITHLPTGLVVECQDERSQYKNKDKAMKVLKSRLLEAEREKQQNEVAQERKSQVGTGD 301

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RSERIRTYNFPQGR+TDHR+G+T + + D+M G NLD  IDAL+
Sbjct: 302 RSERIRTYNFPQGRLTDHRIGLTLYRLEDVMNG-NLDEVIDALI 344


>gi|20806672|ref|NP_621843.1| peptide chain release factor 1 [Thermoanaerobacter tengcongensis
           MB4]
 gi|22096035|sp|Q8RD98.1|RF1_THETN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|20515122|gb|AAM23447.1| Protein chain release factor A [Thermoanaerobacter tengcongensis
           MB4]
          Length = 356

 Score =  315 bits (806), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 141/257 (54%), Positives = 195/257 (75%), Gaps = 1/257 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD  DE++ I+E+RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   ++D+ G+
Sbjct: 98  LLPKDPNDEKNVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKGWKVEIMSANKTDIGGF 157

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE   +ISG G Y +LK+ESG+HRVQR+P TE  GR+HTS  +VA+LP+A+EVDV +   
Sbjct: 158 KEVIFSISGKGAYSRLKYESGVHRVQRIPTTEAGGRIHTSTATVAVLPEAEEVDVEINPN 217

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D++ID +RS G GGQ  NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYE
Sbjct: 218 DIKIDVFRSSGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYE 277

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           M         ++ R  Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++GE LD 
Sbjct: 278 MALKEQQREIAEARKSQVGTGERSERIRTYNFPQGRVTDHRIGLTLYKLQEVLDGE-LDE 336

Query: 296 FIDALLLQQEMDAIASF 312
            IDAL+L  + + + + 
Sbjct: 337 IIDALILNDQAEKLKNM 353


>gi|409399752|ref|ZP_11249997.1| peptide chain release factor 1 [Acidocella sp. MX-AZ02]
 gi|409131125|gb|EKN00843.1| peptide chain release factor 1 [Acidocella sp. MX-AZ02]
          Length = 353

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 147/285 (51%), Positives = 207/285 (72%), Gaps = 1/285 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM ++A  EL     +   L+  +  +LLPKD+AD R  ILE+R   GG+EA LFA +
Sbjct: 68  DPDMKELAEAELHTLKAQIPELEMAVRLALLPKDEADARSGILEIRPAAGGDEAGLFAAE 127

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F  Y++Y+  +GW+FEV+   E++L G K A A I+G  V+ +LKFESG+HRVQRVP T
Sbjct: 128 LFSAYQKYAASQGWRFEVLEYDENELGGVKGAMAEITGKSVFARLKFESGVHRVQRVPTT 187

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS ++VA++P+A+EVDV +   DLRID YR+ G+GGQH N T SAVR+THIPT
Sbjct: 188 ETQGRIHTSTITVAVMPEAEEVDVDINEADLRIDVYRASGAGGQHVNKTESAVRITHIPT 247

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G  +++Q+ERSQH N+AKA+K+L +++YE +R+ +  +R+  R  Q+G+GDRSERIRTYN
Sbjct: 248 GTVVAMQEERSQHKNRAKAMKILRSRIYEQQRAALSATRAADRKGQVGTGDRSERIRTYN 307

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           FPQGRVTDHR+ +T H I  +M GE  DI I+AL+ + +   +A+
Sbjct: 308 FPQGRVTDHRINLTLHKIDRVMLGEFDDI-IEALIAEDQAARLAA 351


>gi|328952115|ref|YP_004369449.1| peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
 gi|328452439|gb|AEB08268.1| Peptide chain release factor 1 [Desulfobacca acetoxidans DSM 11109]
          Length = 357

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 152/291 (52%), Positives = 216/291 (74%), Gaps = 2/291 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           ++E D  ++L+ +   D+++ ++A EE+    +  + L++ L   LLPKD  D ++ +LE
Sbjct: 56  ERECDNNQALL-KTETDEEIKELAREEIQQLKERLEHLENELRFLLLPKDPNDAKNILLE 114

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGGEEA+LFA ++F+MY R++++ GWK E++    + + G KE  A ISG  VY  
Sbjct: 115 IRAGTGGEEAALFAAELFRMYTRFAEQHGWKVEILSHNPTGIGGLKEIIALISGQQVYSL 174

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           LK+ESG+HRVQRVP TE  GR+HTSAV+VAILP+A++VDV++  E+LRID +RS G GGQ
Sbjct: 175 LKYESGVHRVQRVPTTESQGRIHTSAVTVAILPEAEDVDVQISPEELRIDVFRSSGPGGQ 234

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+TH+PTGM ++ QDE+SQH NKAKALKVL A+L ++++   H   ++ R 
Sbjct: 235 SVNTTDSAVRITHLPTGMVVTCQDEKSQHKNKAKALKVLQARLLDIKQQEQHQKMAQDRK 294

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            Q+GSGDRSERIRTYNFPQGRVTDHR+G+T + +   +EG  LD  +DAL+
Sbjct: 295 SQVGSGDRSERIRTYNFPQGRVTDHRLGLTLYRLEAFLEG-GLDELLDALV 344


>gi|26987469|ref|NP_742894.1| peptide chain release factor 1 [Pseudomonas putida KT2440]
 gi|32171521|sp|Q88PW5.1|RF1_PSEPK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|24982133|gb|AAN66358.1|AE016264_2 peptide chain release factor 1 [Pseudomonas putida KT2440]
          Length = 360

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D D+ +MA EE+  A ++   L++ L + LLPKD  D R
Sbjct: 54  EWRKVQDDLEGAQALLKDS--DPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGE 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GRVHTSA +VA+LP+ DE   + +   DLR+DTYR+
Sbjct: 172 NVYGKLKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + 
Sbjct: 292 LASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|433656140|ref|YP_007299848.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum M0795]
 gi|433294329|gb|AGB20151.1| peptide chain release factor 1 [Thermoanaerobacterium
           thermosaccharolyticum M0795]
          Length = 353

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 158/310 (50%), Positives = 220/310 (70%), Gaps = 1/310 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           ++ + R  +K +D +KS       D D+ DMA EEL    ++E +L + +   LLPKD  
Sbjct: 44  IVQKYREYKKVLDDIKSTKEIIEMDDDLKDMAQEELKSLEEKENKLLNEIKLLLLPKDPN 103

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DE+D I+E+RAG GGEEA+LFA D+F+MY  Y++KK WK+E++    ++L G+KE   +I
Sbjct: 104 DEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKHWKYEIMSSNATELGGFKEVIFSI 163

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G G Y +LKFESG+HRVQR+P TE  GR+HTS  +VA+LP+ ++VDV +   D++ID +
Sbjct: 164 AGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDVEINPNDIKIDVF 223

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RSGG GGQ  NTT+SAVR+THIPTG+ IS QDERSQ  N+ +A+K+L AKLYEM R    
Sbjct: 224 RSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEKE 283

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              S  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + +  +++G +LD  IDALL 
Sbjct: 284 KEISMTRKLQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDG-DLDEIIDALLA 342

Query: 303 QQEMDAIASF 312
           + + + + S 
Sbjct: 343 EDQAERLESM 352


>gi|329888688|ref|ZP_08267286.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
 gi|328847244|gb|EGF96806.1| peptide chain release factor 1 [Brevundimonas diminuta ATCC 11568]
          Length = 345

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 148/309 (47%), Positives = 218/309 (70%), Gaps = 6/309 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           +  L   + E D LK++    + D +M  +A++EL    +    L+  +   L P+D  +
Sbjct: 38  VQALARARAEADDLKAM----AADPEMAALASDELDALTERLPTLEREVALLLAPRDADE 93

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
               +LEVRAGTGG+EA+LFA D+F+MY RY+Q +GW+ E+    E D  G+KE  A +S
Sbjct: 94  NASAVLEVRAGTGGDEAALFAGDLFRMYSRYAQSRGWRVEIDSAAEGDAGGFKEIIATVS 153

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+G+LKFESG+HRVQRVP TE  GR+HTSA ++A+LP+ ++V++ + ++D+RIDTYR
Sbjct: 154 GEGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATIAVLPEVEDVEIEILDKDIRIDTYR 213

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH N T+SAVR+TH+PTG+ ++   E+SQH+N+ KA+K L  +LY+M+R     
Sbjct: 214 SSGAGGQHVNKTDSAVRITHLPTGI-VATSSEKSQHVNRDKAMKNLRVRLYDMQRQAKDA 272

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H++  ++EG +LD  ++AL+ +
Sbjct: 273 ARSDARKSQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHSLPQILEG-DLDPMLNALIAE 331

Query: 304 QEMDAIASF 312
            +   +A  
Sbjct: 332 DQAARLADL 340


>gi|404399170|ref|ZP_10990754.1| peptide chain release factor 1 [Pseudomonas fuscovaginae UPB0736]
          Length = 360

 Score =  314 bits (805), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 153/304 (50%), Positives = 217/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE   A ++   L+S L + LLPKD  D R+  LE
Sbjct: 59  QSDLEGAQALLKDS--DPDMREMAVEEAREAKEQLVELESSLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++  +E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRVEILSESEGEHGGYKEVIARVEGESVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLRIDTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+THIP+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHRV +T +++ ++M G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEIMAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|261363763|ref|ZP_05976646.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
 gi|288568341|gb|EFC89901.1| peptide chain release factor 1 [Neisseria mucosa ATCC 25996]
          Length = 358

 Score =  314 bits (804), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D ATEE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +L+   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DLEEITNALIAEHQAELLAAMG 357


>gi|340029419|ref|ZP_08665482.1| peptide chain release factor 1 [Paracoccus sp. TRP]
          Length = 352

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 154/304 (50%), Positives = 216/304 (71%), Gaps = 20/304 (6%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLK-------SL 56
           I E R  Q  I   ++++     D +M ++A +EL        RL+SLL         +L
Sbjct: 47  IGEWRAAQDGIREAQAMLA----DPEMRELAEDELS-------RLRSLLPDLEHALRIAL 95

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LP+D AD R  ILE+R GTGGEEA+LFA D+  MY R+++ +GW+F+++ + ESDL G +
Sbjct: 96  LPRDAADARPAILEIRPGTGGEEAALFAADLLNMYRRFAESQGWQFQLLELAESDLGGVR 155

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EA A I G GV+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A EVD+ +   D
Sbjct: 156 EAVARIEGEGVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQEVDIEIPAND 215

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+A A+ VL A+LY++
Sbjct: 216 IRIDTMRASGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRANAMAVLRARLYDL 274

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ERSR    R+  R  Q+GSGDRSERIRTYNFPQGR+TDHR+G+T +++  +++G +L   
Sbjct: 275 ERSRADAERAADRKSQVGSGDRSERIRTYNFPQGRMTDHRIGLTLYSLDRIIQG-DLGEV 333

Query: 297 IDAL 300
           +DAL
Sbjct: 334 VDAL 337


>gi|282857117|ref|ZP_06266363.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
 gi|282585052|gb|EFB90374.1| peptide chain release factor 1 [Pyramidobacter piscolens W5455]
          Length = 358

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 151/284 (53%), Positives = 209/284 (73%), Gaps = 11/284 (3%)

Query: 27  DKDMLDMATEELCLAIDEEK-----RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEAS 81
           D ++ ++A  EL     EEK     +++  L  +LLPKD  DE+D I+E+RAGTGG+EAS
Sbjct: 71  DHELAELAKMEL-----EEKEPLLGKIEEQLRVALLPKDPNDEKDVIMEIRAGTGGDEAS 125

Query: 82  LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 141
           LFA D+F+MY RY++++GWK E+V   E+++ GYKE    I G GVY +LK+ESG+HRVQ
Sbjct: 126 LFAADLFRMYSRYAEREGWKLEIVDENETEVGGYKEIVLQIHGRGVYSQLKYESGVHRVQ 185

Query: 142 RVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           RVP TE  GR+HTSA +V ++P AD++D+ +R EDL+IDTYRS G+GGQH N T+SAVR+
Sbjct: 186 RVPATEAGGRIHTSAATVVVMPVADDIDIEIRPEDLKIDTYRSSGAGGQHVNMTDSAVRI 245

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ ++ QDERSQ  N+AKAL+VL  +LY+ E  +   + S  R   IGSGDRSER
Sbjct: 246 THLPTGLVVTCQDERSQIKNRAKALQVLKTRLYDAEVEKQRSAESAERKGMIGSGDRSER 305

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           IRTYN+PQ RVTDHR+G+T + +  MM+G +L   I AL++ ++
Sbjct: 306 IRTYNYPQNRVTDHRIGLTLYKLEYMMDG-DLYEMIKALVMAEQ 348


>gi|386010393|ref|YP_005928670.1| protein PrfA [Pseudomonas putida BIRD-1]
 gi|395447154|ref|YP_006387407.1| PrfA [Pseudomonas putida ND6]
 gi|397693751|ref|YP_006531631.1| peptide chain release factor 1 [Pseudomonas putida DOT-T1E]
 gi|421524618|ref|ZP_15971239.1| peptide chain release factor 1 [Pseudomonas putida LS46]
 gi|313497099|gb|ADR58465.1| PrfA [Pseudomonas putida BIRD-1]
 gi|388561151|gb|AFK70292.1| PrfA [Pseudomonas putida ND6]
 gi|397330481|gb|AFO46840.1| Peptide chain release factor 1 [Pseudomonas putida DOT-T1E]
 gi|402751081|gb|EJX11594.1| peptide chain release factor 1 [Pseudomonas putida LS46]
          Length = 360

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D D+ +MA EE+  A ++   L++ L + LLPKD  D R
Sbjct: 54  EWRKVQDDLEGAQALLKDS--DPDLREMAVEEVREAKEQLLTLEAQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGE 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GRVHTSA +VA+LP+ DE   + +   DLR+DTYR+
Sbjct: 172 NVYGKLKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + 
Sbjct: 292 IASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|365873556|ref|ZP_09413089.1| peptide chain release factor 1 [Thermanaerovibrio velox DSM 12556]
 gi|363983643|gb|EHM09850.1| peptide chain release factor 1 [Thermanaerovibrio velox DSM 12556]
          Length = 357

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 147/310 (47%), Positives = 219/310 (70%), Gaps = 3/310 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
             E +   K ++  K L+    ED+DM  +A EE+    +    L+  L   LLP+D  D
Sbjct: 50  FKEYQRASKALEEAKELM--SQEDEDMRALAREEVQRLSERLPELEQELKVLLLPRDPND 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            +D I+E+RAG GG+EA+LFA D+F+MY RY++++GW++E++ + E+ + GYKE    + 
Sbjct: 108 HKDVIIEIRAGAGGDEAALFAADLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVK 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y KLKFESG+HRVQR+P TE SGR+HTS  +VA+LP+A++VDV++R EDL+IDTYR
Sbjct: 168 GDGAYSKLKFESGVHRVQRIPATEASGRIHTSTATVAVLPEAEDVDVQVRPEDLKIDTYR 227

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQ+ N T+SAVR+THIPTG+ ++ QDERSQ  N+AKA+++L A+LY+ME  R   
Sbjct: 228 ASGAGGQYVNMTDSAVRITHIPTGLVVTCQDERSQLKNRAKAMQLLRARLYDMELQRQQA 287

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
             +  R  Q+G+GDRSERIRTYN+PQ R+TDHR+G T + +  +++G +L   I+AL + 
Sbjct: 288 QMAAERKGQVGTGDRSERIRTYNYPQNRLTDHRIGFTLYKLDQVLDG-DLYELIEALRMA 346

Query: 304 QEMDAIASFG 313
            + + + +  
Sbjct: 347 DQAEKLKTLA 356


>gi|95929013|ref|ZP_01311758.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
 gi|95134914|gb|EAT16568.1| peptide chain release factor 1 [Desulfuromonas acetoxidans DSM 684]
          Length = 358

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 156/303 (51%), Positives = 214/303 (70%), Gaps = 3/303 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           R  Q+EI+  + L+ +  +D DM +MA EEL    DE + L   L   +LPKD  D ++ 
Sbjct: 54  RQIQQEIEDNRELMRD--DDPDMREMAREELPALEDECEHLAEKLTLLMLPKDPNDGKNI 111

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           ILE+RAGTGG+EA+LFA D+F+ Y RY++K  WK E++  +ES + G+KE  A ISG  V
Sbjct: 112 ILEIRAGTGGDEAALFAGDLFRAYSRYAEKHRWKVEIMSSSESGVGGFKEVIAMISGENV 171

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y +LK+ESG HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   DLRID YR+ G+
Sbjct: 172 YSRLKYESGTHRVQRVPETETQGRIHTSACTVAVLPEAEEVDLEINPSDLRIDLYRASGA 231

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH N T SAVR+THIPTG+ ++ QDE+SQH NKA+A+KVL +++ +   +  H   + 
Sbjct: 232 GGQHVNKTESAVRITHIPTGVVVACQDEKSQHKNKARAMKVLRSRILDAMEAEKHAEMAA 291

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R  Q+GSGDRSERIRTYNFPQGR TDHR+G+T + +  +M+G +LD   DAL    + +
Sbjct: 292 DRKSQVGSGDRSERIRTYNFPQGRCTDHRIGLTLYKLDAIMQG-DLDEVFDALTTHYQAE 350

Query: 308 AIA 310
            +A
Sbjct: 351 LMA 353


>gi|86138685|ref|ZP_01057258.1| peptide chain release factor 1 [Roseobacter sp. MED193]
 gi|85824745|gb|EAQ44947.1| peptide chain release factor 1 [Roseobacter sp. MED193]
          Length = 361

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 152/315 (48%), Positives = 219/315 (69%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           SE++   ++I   + L+ +  +      D DM ++A EE+          +  L  +LLP
Sbjct: 48  SEIKPVAEQITAYRQLLTDLEDAEAMLSDPDMKELAAEEIPELKAALPGAEEALQLALLP 107

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GWKFEV+    ++L G KE 
Sbjct: 108 KDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKFEVIEEQATELGGIKEV 167

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I G  V+ ++K+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A EVDV++   D+R
Sbjct: 168 VAHIKGENVFARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAQEVDVQIDPSDIR 227

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+THIPTG+ + +  E+SQH N+  A++VL A+LY++ER
Sbjct: 228 IDTMRASGAGGQHVNTTDSAVRITHIPTGVMV-VSAEKSQHRNREIAMQVLRARLYDLER 286

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            R+   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M+G +LD  ID
Sbjct: 287 QRVDSERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLDQIMQG-DLDEIID 345

Query: 299 ALLLQQEMDAIASFG 313
           AL    +   +A  G
Sbjct: 346 ALTADNQARLLAEMG 360


>gi|332800047|ref|YP_004461546.1| peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
           Re1]
 gi|438003343|ref|YP_007273086.1| Peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
           Re1]
 gi|332697782|gb|AEE92239.1| Peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
           Re1]
 gi|432180137|emb|CCP27110.1| Peptide chain release factor 1 [Tepidanaerobacter acetatoxydans
           Re1]
          Length = 356

 Score =  314 bits (804), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 150/299 (50%), Positives = 215/299 (71%), Gaps = 1/299 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           K+++    L+ + + D +M  +   EL    +++ +LQ  L   LLP+D  D+R+ I+E+
Sbjct: 56  KQLEENSELLEDAAGDIEMEQLIKSELEALEEKKSKLQEQLRILLLPQDPNDDRNVIMEI 115

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG+EA+LFA D+F+MY RY++K+GWK E++    ++L G+KE    I+G G Y +L
Sbjct: 116 RAGTGGDEAALFAGDLFRMYSRYAEKQGWKVEIIDSNPTELGGFKEVIFEINGKGAYSRL 175

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A EVD+ +  +DLRID YR+ G GGQ 
Sbjct: 176 KYESGVHRVQRVPSTEAGGRIHTSAATVAVLPEAHEVDIEINPDDLRIDIYRASGHGGQG 235

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVR+THIPTG+ ++ QDERSQ  NK KA+KVL A+L E  +       ++ R  
Sbjct: 236 VNTTDSAVRITHIPTGLVVTCQDERSQLKNKDKAMKVLRARLLEKVQEEQEREIAQNRRS 295

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           Q+GSGDRSERIRTYNFPQGR+TDHR+ +T H ++++++GE LD  IDAL+ + +   +A
Sbjct: 296 QVGSGDRSERIRTYNFPQGRITDHRINLTTHQLTNVLQGE-LDELIDALVAEDQAKKLA 353


>gi|90422036|ref|YP_530406.1| peptide chain release factor 1 [Rhodopseudomonas palustris BisB18]
 gi|119361591|sp|Q21BZ9.1|RF1_RHOPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|90104050|gb|ABD86087.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodopseudomonas
           palustris BisB18]
          Length = 361

 Score =  313 bits (803), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 142/260 (54%), Positives = 196/260 (75%)

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           +LLPKD  D+R+ +LE+RAGTGG+EASLFA D+F+MYE+++  +GW  EVV  +E  + G
Sbjct: 100 ALLPKDAMDDRNVMLEIRAGTGGDEASLFAGDLFRMYEKFAVLQGWSVEVVSASEGTMGG 159

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           YKE  A + G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ +EVDV ++ 
Sbjct: 160 YKEIIAEVKGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEEVDVDIKP 219

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           +DLRI+T R+ G+GGQH N T SA+R+THIPTG+ + +QD RSQH N+A A+ +L +++Y
Sbjct: 220 DDLRIETMRAQGAGGQHVNKTESAIRITHIPTGLQVMMQDSRSQHKNRASAMNILRSRIY 279

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           + E+ RI   RS  R E++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L 
Sbjct: 280 DAEQQRIDSVRSAERKEKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALG 339

Query: 295 IFIDALLLQQEMDAIASFGS 314
             IDAL  + +   +A+ G+
Sbjct: 340 ELIDALTTEHQAAQLAAQGN 359


>gi|294669176|ref|ZP_06734256.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308808|gb|EFE50051.1| peptide chain release factor 1 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 358

 Score =  313 bits (803), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D ATEE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFATEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +++   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DMEEITNALIAEHQAELLAAMG 357


>gi|373454431|ref|ZP_09546297.1| peptide chain release factor 1 [Dialister succinatiphilus YIT
           11850]
 gi|371935706|gb|EHO63449.1| peptide chain release factor 1 [Dialister succinatiphilus YIT
           11850]
          Length = 360

 Score =  313 bits (803), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 152/285 (53%), Positives = 208/285 (72%), Gaps = 9/285 (3%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLL---KSLLPKDDADERDCILEVRAGTGG 77
           I E     D+ ++A E+L    + EK+++ L L   K L+PKD  D ++ ILE+RAGTGG
Sbjct: 65  ILEDKSQADLHELAKEDLK---ENEKKMEELDLEIHKMLIPKDPNDGKNVILEIRAGTGG 121

Query: 78  EEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGI 137
           EEA+LFA D+ KMY +++++KGWK E+    E+DL G+KE +  I G   Y  LKFESG+
Sbjct: 122 EEAALFAADLLKMYIKFAERKGWKLEIANANETDLGGFKEVTCTIEGKNAYSILKFESGV 181

Query: 138 HRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNS 197
           HRVQR+P TE  GRVHTSAV+VA+LP+A++VDV +R EDLRID YRS G+GGQH N T+S
Sbjct: 182 HRVQRIPETESQGRVHTSAVTVAVLPEAEDVDVDIRREDLRIDVYRSSGAGGQHINKTSS 241

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKL-RSEQIGSG 256
           A+R+TH+PTGM ++ Q+ERSQ  NK KAL++L ++LY+ +  R  +S+    R  Q+GSG
Sbjct: 242 AIRITHLPTGMVVTCQNERSQRQNKEKALQILKSRLYD-QALRASISKEAADRKSQVGSG 300

Query: 257 DRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           DRSERIRTYN+PQGRVTDHRV ++ + + D M G N+D  +D L+
Sbjct: 301 DRSERIRTYNYPQGRVTDHRVNMSIYQLDDFMNG-NMDPILDRLM 344


>gi|148546007|ref|YP_001266109.1| peptide chain release factor 1 [Pseudomonas putida F1]
 gi|166223590|sp|A5VYG5.1|RF1_PSEP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148510065|gb|ABQ76925.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           putida F1]
          Length = 360

 Score =  313 bits (803), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D D+ +MA EE+  A ++   L++ L + LLPKD  D R
Sbjct: 54  EWRKVQDDLEGAQALLKDS--DPDLREMALEEVREAKEQLLTLEAQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGE 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GRVHTSA +VA+LP+ DE   + +   DLR+DTYR+
Sbjct: 172 NVYGKLKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + 
Sbjct: 292 IASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|347732302|ref|ZP_08865383.1| peptide chain release factor 1 [Desulfovibrio sp. A2]
 gi|347518836|gb|EGY26000.1| peptide chain release factor 1 [Desulfovibrio sp. A2]
          Length = 357

 Score =  313 bits (802), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 160/307 (52%), Positives = 220/307 (71%), Gaps = 9/307 (2%)

Query: 18  KSLIYECSEDKDMLDMATEEL-CLAIDEEKRLQSLLLK-------SLLPKDDADERDCIL 69
           K L    +++K++LD +  E+  +A +E K L++ + +        LLPKD  DE++ I+
Sbjct: 52  KELRQNLADNKELLDDSDPEIRSMAHEEAKSLEAAIPEIEQELQLLLLPKDPLDEKNTIV 111

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           E+RAGTGGEEA+LFA D+F+MY RY++ +GWK E++   ESD  GYKE  A I G  VY 
Sbjct: 112 EIRAGTGGEEAALFAADLFRMYSRYAEIRGWKVEILSANESDTGGYKEIIALIVGDKVYS 171

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 189
           +LKFESG HRVQRVP TE  GR+HTSA +VAILP+A+EVDV +R +D+RID +R+ G+GG
Sbjct: 172 RLKFESGTHRVQRVPATESQGRIHTSAATVAILPEAEEVDVEIRPDDIRIDVFRASGAGG 231

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T SAVR+TH+P+G+ +S QDE+SQH NKAKA+KVL ++L + E+ R H   +  R
Sbjct: 232 QHVNKTESAVRITHMPSGIVVSCQDEKSQHKNKAKAMKVLASRLLQAEQDRQHNEMAADR 291

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
             Q+GSGDRSERIRTYNFPQGRVTDHR+ +T +++  +MEGE   +F DAL    + +A+
Sbjct: 292 RSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLDRVMEGEAQALF-DALSTHAQTEAL 350

Query: 310 ASFGSTQ 316
            +    Q
Sbjct: 351 KAQADVQ 357


>gi|398848323|ref|ZP_10605144.1| peptide chain release factor 1 [Pseudomonas sp. GM84]
 gi|398248763|gb|EJN34164.1| peptide chain release factor 1 [Pseudomonas sp. GM84]
          Length = 360

 Score =  313 bits (802), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 220/309 (71%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           + R  Q +++G ++L+ +   D D+ +MA EE+  A ++   L+S L + LLPKD  D R
Sbjct: 54  DWRKVQDDLEGAQALLKDA--DPDLREMAVEEVRDAKEQLVGLESQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DTYR+
Sbjct: 172 SVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + 
Sbjct: 292 IASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|388547180|ref|ZP_10150448.1| peptide chain release factor 1 [Pseudomonas sp. M47T1]
 gi|388274755|gb|EIK94349.1| peptide chain release factor 1 [Pseudomonas sp. M47T1]
          Length = 360

 Score =  313 bits (802), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 152/304 (50%), Positives = 217/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKEQLVVLEGNLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DT+RS G+GG
Sbjct: 177 LKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDERVAIEINPADLRVDTFRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH NTT+SA+R+TH+PTG  +  Q+ERSQH N+A+A+  L AKL +M+ S    + +  R
Sbjct: 237 QHVNTTDSAIRITHLPTGTVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHRV +T +++ ++M G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVMAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|146277160|ref|YP_001167319.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17025]
 gi|166223594|sp|A4WRK0.1|RF1_RHOS5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145555401|gb|ABP70014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 351

 Score =  313 bits (801), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 153/301 (50%), Positives = 218/301 (72%), Gaps = 13/301 (4%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEEL-CLAIDEEKRL--------QSLLLKS 55
           +EL+    EI   ++ + + +E + ML  A  E+  LA DE  RL        Q+L L +
Sbjct: 38  AELKPVVAEIAAYRTALEDLAEAEAML--ADPEMRALAEDELPRLRARIPEMEQALRL-A 94

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLP+D AD R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW+FE++ +  S+L G 
Sbjct: 95  LLPRDAADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEAQGWRFELLDLAPSELGGI 154

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           +EA+A I G G + +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   
Sbjct: 155 REATARIEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDIAIPAA 214

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D+RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY+
Sbjct: 215 DIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHRNREIAMQVLRARLYD 273

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           +ER R+  +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M G+  ++
Sbjct: 274 LERQRLAEARSADRKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQIMAGDLAEV 333

Query: 296 F 296
            
Sbjct: 334 I 334


>gi|104780100|ref|YP_606598.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
 gi|166223588|sp|Q1IEX1.1|RF1_PSEE4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|95109087|emb|CAK13784.1| peptide chain release factor 1 [Pseudomonas entomophila L48]
          Length = 360

 Score =  313 bits (801), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 151/307 (49%), Positives = 219/307 (71%), Gaps = 4/307 (1%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           R  Q +++G ++L+ +   D D+ +MA EE+  A ++   L+S L + LLPKD  D R+ 
Sbjct: 56  RKVQDDLEGAQALLKDA--DPDLREMAVEEVREAKEQLVGLESQLQRMLLPKDPNDGRNV 113

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
            LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G  V
Sbjct: 114 FLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGDSV 173

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGG 186
           YGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DTYR+ G
Sbjct: 174 YGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRASG 233

Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRS 246
           +GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    + +
Sbjct: 234 AGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIA 293

Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEM 306
             R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL + + 
Sbjct: 294 SERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAG-GVDAVIEPLLAEYQA 352

Query: 307 DAIASFG 313
           D +A+ G
Sbjct: 353 DQLAALG 359


>gi|339499058|ref|YP_004697093.1| peptide chain release factor 1 [Spirochaeta caldaria DSM 7334]
 gi|338833407|gb|AEJ18585.1| Peptide chain release factor 1 [Spirochaeta caldaria DSM 7334]
          Length = 356

 Score =  313 bits (801), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 150/305 (49%), Positives = 217/305 (71%), Gaps = 7/305 (2%)

Query: 4   ISELRTKQKEIDGLKSLIYECS------EDKDMLDMATEELCLAIDEEKRLQSLLLKSLL 57
           +SE+    +E + L++ I E        +D +M ++A EEL     + +  Q  L   L+
Sbjct: 41  LSEVVAAHRECEALEASIAETQSLIQNEKDPEMKELAKEELKELEVKLQEAQDRLKFLLI 100

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE++ I+E+R G GG+EA+LFA D+F+MY RY++ KGWK EV+ + E++L G KE
Sbjct: 101 PKDPLDEKNIIMEIRGGAGGDEAALFAADLFRMYSRYAENKGWKIEVMSMNETELGGLKE 160

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
              +I+G  VY  L++ESG+HRVQRVP TE SGR+HTS V+VA+LP+A+E ++ ++ EDL
Sbjct: 161 IIFSIAGKNVYENLRYESGVHRVQRVPATEASGRIHTSTVTVAVLPEAEETEIEIKQEDL 220

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RID  R+GG GGQ  NTT+SAVR+THIP+G+ +  QDE+SQ  NKAKA+++L A+LYEME
Sbjct: 221 RIDVMRAGGPGGQCVNTTDSAVRITHIPSGIVVHCQDEKSQIKNKAKAMRILRARLYEME 280

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
             +    R++ R  Q+G+GDRSERIRTYNFPQ R+TDHR+ +T + +  +M+G+  ++F 
Sbjct: 281 EQKAQAERAEARKSQVGTGDRSERIRTYNFPQNRLTDHRINLTLYKLDLIMQGDVQELF- 339

Query: 298 DALLL 302
           DAL L
Sbjct: 340 DALKL 344


>gi|206890162|ref|YP_002248216.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|238054474|sp|B5YIQ7.1|RF1_THEYD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206742100|gb|ACI21157.1| peptide chain release factor 1 [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 353

 Score =  313 bits (801), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 147/277 (53%), Positives = 203/277 (73%), Gaps = 1/277 (0%)

Query: 25  SEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           S D D+ ++A EEL      + +++  L   LLPKD  DE++ ILE+RAGTGGEEA+LFA
Sbjct: 67  SGDPDLKELAEEELQQLKKIKPQIEQELKVLLLPKDPRDEKNVILEIRAGTGGEEAALFA 126

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            ++F+MY +Y++ KGWK E++    + L G+KE  A ISG G + KLK+ESG+HRVQR+P
Sbjct: 127 ANLFRMYAKYAESKGWKVEIIDSHPTGLGGFKEIIATISGKGAFSKLKYESGVHRVQRIP 186

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           +TE SGR+HTS  +VA+LP+A+EVD+++  +DLRIDT+ S G GGQ  NT  SAVR+ HI
Sbjct: 187 VTEASGRIHTSTATVAVLPEAEEVDIKIDEKDLRIDTFCSSGPGGQSVNTAYSAVRIVHI 246

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQ  N+ KA+KVL A+L E+ER +    R+  R  Q+G+G+RSERIRT
Sbjct: 247 PTGIIVQCQDERSQIKNREKAMKVLRARLLEIERQKKEAERAAERKGQVGTGERSERIRT 306

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           YNFPQ RVTDHR+G+T + +  ++ G N+D  IDAL+
Sbjct: 307 YNFPQNRVTDHRIGLTLYKLEQVLNG-NIDEIIDALI 342


>gi|253827187|ref|ZP_04870072.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313141390|ref|ZP_07803583.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|253510593|gb|EES89252.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
 gi|313130421|gb|EFR48038.1| peptide chain release factor 1 [Helicobacter canadensis MIT
           98-5491]
          Length = 356

 Score =  313 bits (801), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 211/288 (73%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +DK++ D+A EE+  A  E + L+S +   LLPKD  DE++  LE+RAGTGG+EA +F  
Sbjct: 67  DDKELGDLAKEEIKEAELENQNLESEIKILLLPKDPNDEKNIYLELRAGTGGDEAGIFVG 126

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+FK Y RY++ KGWK E++  +E+++ GYKE  A I G G Y +LKFE G HRVQRVP 
Sbjct: 127 DLFKAYIRYAESKGWKVEIISSSENNVGGYKEVIALIKGKGAYSRLKFEGGTHRVQRVPE 186

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA++VAI+P+ D+V+V +   DLRI+ +R+GG GGQ  NTT+SAVR+THIP
Sbjct: 187 TESQGRIHTSAITVAIMPEVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIP 246

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+++S+QDE+SQH NK KALK+L A++YE E        ++ R  Q+GSGDRSERIRTY
Sbjct: 247 TGISVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGSGDRSERIRTY 306

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQ R++DHR+G+T +++ ++M   +LD  I+ ++   + +A+ + G
Sbjct: 307 NYPQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQAEALQNSG 354


>gi|216264551|ref|ZP_03436543.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218249543|ref|YP_002374724.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221217544|ref|ZP_03589014.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223889241|ref|ZP_03623829.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224532854|ref|ZP_03673469.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224534094|ref|ZP_03674677.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225549805|ref|ZP_03770769.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226321514|ref|ZP_03797040.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|387825850|ref|YP_005805303.1| peptide chain release factor 1 [Borrelia burgdorferi JD1]
 gi|3914620|sp|O51214.1|RF1_BORBU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|226739097|sp|B7J1C9.1|RF1_BORBZ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|215981024|gb|EEC21831.1| peptide chain release factor 1 [Borrelia burgdorferi 156a]
 gi|218164731|gb|ACK74792.1| peptide chain release factor 1 [Borrelia burgdorferi ZS7]
 gi|221192607|gb|EEE18824.1| peptide chain release factor 1 [Borrelia burgdorferi 72a]
 gi|223885274|gb|EEF56376.1| peptide chain release factor 1 [Borrelia burgdorferi 64b]
 gi|224512243|gb|EEF82629.1| peptide chain release factor 1 [Borrelia burgdorferi WI91-23]
 gi|224512793|gb|EEF83161.1| peptide chain release factor 1 [Borrelia burgdorferi CA-11.2a]
 gi|225369613|gb|EEG99062.1| peptide chain release factor 1 [Borrelia burgdorferi 118a]
 gi|226232703|gb|EEH31456.1| peptide chain release factor 1 [Borrelia burgdorferi Bol26]
 gi|312148526|gb|ADQ31185.1| peptide chain release factor 1 [Borrelia burgdorferi JD1]
          Length = 357

 Score =  313 bits (801), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 142/282 (50%), Positives = 206/282 (73%), Gaps = 1/282 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLMI 345


>gi|56707338|ref|YP_169234.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110669808|ref|YP_666365.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|254370015|ref|ZP_04986022.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874173|ref|ZP_05246883.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|379716536|ref|YP_005304872.1| Peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis TIGB03]
 gi|379725219|ref|YP_005317405.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis TI0902]
 gi|385793928|ref|YP_005830334.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis NE061598]
 gi|421754782|ref|ZP_16191747.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 80700075]
 gi|61214577|sp|Q5NIA8.1|RF1_FRATT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361541|sp|Q14JR1.1|RF1_FRAT1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|54112995|gb|AAV29131.1| NT02FT0305 [synthetic construct]
 gi|56603830|emb|CAG44801.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320141|emb|CAL08184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151568260|gb|EDN33914.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840172|gb|EET18608.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282158463|gb|ADA77854.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis NE061598]
 gi|377826668|gb|AFB79916.1| Peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis TI0902]
 gi|377828213|gb|AFB78292.1| Peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis TIGB03]
 gi|409090449|gb|EKM90467.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 80700075]
          Length = 361

 Score =  313 bits (801), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|187931103|ref|YP_001891087.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|238691540|sp|B2SFF6.1|RF1_FRATM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|187712012|gb|ACD30309.1| peptide chain release factor 1 [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLILEHQADLLATM 358


>gi|169333846|ref|ZP_02861039.1| hypothetical protein ANASTE_00232 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259411|gb|EDS73377.1| peptide chain release factor 1 [Anaerofustis stercorihominis DSM
           17244]
          Length = 355

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/281 (51%), Positives = 212/281 (75%), Gaps = 1/281 (0%)

Query: 25  SEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           S+D D  +M  E++    ++++ L+  +   L+PKD  D+++ I+E+RAG GG+EA+LFA
Sbjct: 68  SDDDDFKEMILEDISSLNEQKEGLEQEIKILLIPKDPNDDKNVIVEIRAGVGGDEAALFA 127

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+ +MY RY+++  WK E++   E  + GYKEA  +I G G Y +LK+ESG HRVQR+P
Sbjct: 128 GDLLRMYTRYAERNRWKVEMLSTNEIGIGGYKEAVFSIQGKGAYSRLKYESGTHRVQRIP 187

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
            TE SGR+HTSA++VA+LP+A++V+V +   DLRID YRS G+GGQ  NTT+SAVR+THI
Sbjct: 188 DTESSGRIHTSAITVAVLPEAEDVEVNIDPNDLRIDVYRSSGNGGQSVNTTDSAVRITHI 247

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           P+G+ ++ QDE+SQ  NK KALK+L A+L+E+E+ +   + +  R  QIGSGDRSERIRT
Sbjct: 248 PSGLVVACQDEKSQLKNKDKALKILKARLFEIEQRKQQEAIASNRKSQIGSGDRSERIRT 307

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           YNFPQGRVTDHRVG+T + ++D+++G+ +D FID L++Q +
Sbjct: 308 YNFPQGRVTDHRVGLTLYKLNDVLDGD-IDEFIDTLIVQDQ 347


>gi|85705322|ref|ZP_01036421.1| peptide chain release factor 1 [Roseovarius sp. 217]
 gi|85670195|gb|EAQ25057.1| peptide chain release factor 1 [Roseovarius sp. 217]
          Length = 426

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/301 (50%), Positives = 222/301 (73%), Gaps = 9/301 (2%)

Query: 3   LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           L+ E+R  ++   +I+G ++++     D +M D+A +EL +       +++ L  +LLP+
Sbjct: 119 LVEEIRAYRQILADIEGARAMLG----DPEMRDLARDELEVLEARLPGMEAALQLALLPR 174

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D+A+ R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW F+V+   +S+L G +E  
Sbjct: 175 DEANARPAILEIRPGTGGEEAALFAADLMRMYQRYAEARGWVFDVIEEQQSELGGIRELV 234

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
             I G GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VDV++   DLRI
Sbjct: 235 VHIKGEGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDVQINPNDLRI 294

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT RS G+GGQH NTT+SAVR+THIP+G+ ++   E+SQH N+  A++VL ++L++MERS
Sbjct: 295 DTMRSSGAGGQHVNTTDSAVRITHIPSGIVVT-SSEKSQHRNREIAMQVLKSRLFDMERS 353

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R+   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M G +LD  IDA
Sbjct: 354 RVDSERSANRAAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLEQVM-GGDLDEVIDA 412

Query: 300 L 300
           L
Sbjct: 413 L 413


>gi|220905560|ref|YP_002480872.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254790877|sp|B8J4R4.1|RF1_DESDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|219869859|gb|ACL50194.1| peptide chain release factor 1 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 356

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/289 (52%), Positives = 203/289 (70%), Gaps = 1/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           ED ++  MA EE+     E   L+  L   LLP D  DE++ ILE+RAGTGGEEA+LFA 
Sbjct: 68  EDPEIRAMAQEEVHRGEAELPNLEHELKVMLLPSDPLDEKNTILEIRAGTGGEEAALFAA 127

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K WK E++  + S+  GYKE    I+G  VY  LKFE+G HRVQRVP 
Sbjct: 128 DLFRMYTRYAELKNWKVEIMSESPSENGGYKEIICLIAGDRVYSHLKFEAGTHRVQRVPA 187

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA +VA++P+A+EVDV +R EDLRID YR+ G+GGQH N T SAVR+TH+P
Sbjct: 188 TEAQGRIHTSAATVAVMPEAEEVDVEIRPEDLRIDIYRASGAGGQHVNKTESAVRITHLP 247

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           T   ++ QDERSQH NKA+A+KVL +++   ER R     S  R  Q+GSGDRSERIRTY
Sbjct: 248 TNTVVTCQDERSQHKNKARAMKVLASRILAAERERQSSELSADRKAQVGSGDRSERIRTY 307

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           NFPQGR TDHR+ +T +++  +MEGE L+  ++AL    + +A+ +  S
Sbjct: 308 NFPQGRCTDHRINLTLYSLDRIMEGE-LESLVEALGTAAQAEALKAQAS 355


>gi|333899125|ref|YP_004472998.1| peptide chain release factor 1 [Pseudomonas fulva 12-X]
 gi|333114390|gb|AEF20904.1| Peptide chain release factor 1 [Pseudomonas fulva 12-X]
          Length = 360

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 154/308 (50%), Positives = 214/308 (69%), Gaps = 4/308 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G  +L+ +   D D+ +MA EE+  A      L+  L + LLPKD  D R
Sbjct: 54  EFRKVQGDLEGALALLKDS--DPDLREMAEEEVDTARARLAELEDSLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LEVRAGTGG+EA++FA D+F+MY RY++K+GW+ EV+   E +  G+KE  A + G 
Sbjct: 112 NVFLEVRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            V+GKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS
Sbjct: 172 NVFGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQMAIEINPADLRVDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+THIPTG  +  Q+ERSQH N+AKA+  L AKL + + +  H  
Sbjct: 232 SGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLKDQQDAAAHKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T +++ +++ G  +D  I+ LL + 
Sbjct: 292 ISDTRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVIAG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASF 312
           + D +A+ 
Sbjct: 351 QADQLAAL 358


>gi|418019208|ref|ZP_12658729.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           R5.15]
 gi|347605454|gb|EGY29899.1| peptide chain release factor 1 [Candidatus Regiella insecticola
           R5.15]
          Length = 293

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 209/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M ++A +EL  A    + L+  L   LLP+D  DERDC LE+RAGTGG+EA++FA 
Sbjct: 3   DDLEMRELAQDELKEAKIRSEALEQKLQVLLLPQDPDDERDCFLEIRAGTGGDEAAIFAG 62

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + WK EV+ + E +  GYKE    I+G GVYG+LKFESG HRVQRVP 
Sbjct: 63  DMFRMYSRYAETRRWKMEVMNINEGEQGGYKEVITKITGNGVYGQLKFESGGHRVQRVPK 122

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P   E +V  + + DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 123 TESQGRIHTSACTVAVMPVLPETEVLEISDSDLRIDTFRSSGAGGQHVNTTDSAIRITHL 182

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA  VL A++ E ER +   +++  R   +GSGDRS+R RT
Sbjct: 183 PTGIVVECQDERSQHKNKAKAKSVLAARIREAERQKRQQTQASERRNLLGSGDRSDRSRT 242

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ LDI I+ ++ + + D +A+ 
Sbjct: 243 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDILIEPIVQEYQADQLAAL 289


>gi|376295460|ref|YP_005166690.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
 gi|323458021|gb|EGB13886.1| peptide chain release factor 1 [Desulfovibrio desulfuricans ND132]
          Length = 355

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 158/308 (51%), Positives = 216/308 (70%), Gaps = 5/308 (1%)

Query: 8   RTKQ--KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           R KQ  +E+D  + ++ +   D ++ +MA  E+     E   ++  L   LLPKD  DE+
Sbjct: 50  RYKQLSQELDDNREMLNDA--DPEIREMAKAEIDDLEGELPEIEEQLKVLLLPKDPMDEK 107

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + ILE+RAGTGG+EA+LFA D+++MY RY++   WK E +    +   GYKE  A+ISG 
Sbjct: 108 NIILEIRAGTGGDEAALFAADLYRMYTRYAEINHWKVEEMSANHTGSGGYKEVIASISGD 167

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
            VY KLK+ESG HRVQRVP TE  GR+HTSAV+VAI+P+A+EVD+ LR EDLR+D +RS 
Sbjct: 168 KVYSKLKYESGTHRVQRVPATESQGRIHTSAVTVAIMPEAEEVDIDLRPEDLRVDVFRSS 227

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SA+RVTHIP+GM +  QDE+SQH NKAKALKVL ++L ++E+ +    +
Sbjct: 228 GPGGQSVNTTDSAIRVTHIPSGMIVICQDEKSQHKNKAKALKVLRSRLLQIEQDKAKAEQ 287

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
              R  Q+GSGDRSERIRTYN+PQGRV+DHR+ +T H +  +MEGE  D+  DAL+   +
Sbjct: 288 EANRRSQVGSGDRSERIRTYNYPQGRVSDHRINLTLHQLPQIMEGELQDL-TDALISYFQ 346

Query: 306 MDAIASFG 313
            +A+   G
Sbjct: 347 AEALKRQG 354


>gi|387886341|ref|YP_006316640.1| peptide chain release factor 1 [Francisella noatunensis subsp.
           orientalis str. Toba 04]
 gi|386871157|gb|AFJ43164.1| peptide chain release factor 1 [Francisella noatunensis subsp.
           orientalis str. Toba 04]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/298 (50%), Positives = 215/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  +RL+  L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KEAAYEMLNEKDVELVEMAKEELKLANEAIERLEDELQILLLPRDPNDDANIFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EVV  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLILEHQADLLATM 358


>gi|89256990|ref|YP_514352.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315350|ref|YP_764073.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134301375|ref|YP_001121343.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|156503190|ref|YP_001429255.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|254368245|ref|ZP_04984265.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|290954490|ref|ZP_06559111.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|421751108|ref|ZP_16188166.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis AS_713]
 gi|421752963|ref|ZP_16189972.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 831]
 gi|421756695|ref|ZP_16193597.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 80700103]
 gi|421758565|ref|ZP_16195410.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 70102010]
 gi|422939253|ref|YP_007012400.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|423051366|ref|YP_007009800.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica F92]
 gi|424673831|ref|ZP_18110762.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 70001275]
 gi|119361542|sp|Q2A1Q0.1|RF1_FRATH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361543|sp|Q0BKE8.1|RF1_FRATO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223558|sp|A7NE96.1|RF1_FRATF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223560|sp|A4IWC1.1|RF1_FRATW RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89144821|emb|CAJ80160.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115130249|gb|ABI83436.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|134049152|gb|ABO46223.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134254055|gb|EBA53149.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica 257]
 gi|156253793|gb|ABU62299.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|407294404|gb|AFT93310.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC200]
 gi|409088776|gb|EKM88835.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 831]
 gi|409089094|gb|EKM89148.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis AS_713]
 gi|409092122|gb|EKM92102.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 70102010]
 gi|409093356|gb|EKM93303.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 80700103]
 gi|417435606|gb|EKT90496.1| peptide chain release factor 1 [Francisella tularensis subsp.
           tularensis 70001275]
 gi|421952088|gb|AFX71337.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica F92]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|398832820|ref|ZP_10590970.1| peptide chain release factor 1 [Herbaspirillum sp. YR522]
 gi|398222599|gb|EJN08969.1| peptide chain release factor 1 [Herbaspirillum sp. YR522]
          Length = 359

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM D A +E+  A      L+  L K LLPKD  DER+  LE+RAGTGG+E++L
Sbjct: 67  ELLSDPDMKDFAQDEIDAARARMAALEGDLQKMLLPKDPNDERNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V  +ES+L GYKE  A I+G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYTRYAERMRWQVEIVSASESELGGYKEVIARIAGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADEV DV +   DLRIDTYR+ G+GGQH N T+SAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEVEDVDINPADLRIDTYRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NKA+A+KVL A++ +++  +     +  R   IGSGDRSER
Sbjct: 247 THLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD    AL+ + + + +A  G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLDFIMDG-DLDELTAALITEHQAELLAQLG 357


>gi|325294472|ref|YP_004280986.1| peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064920|gb|ADY72927.1| Peptide chain release factor 1 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 144/260 (55%), Positives = 196/260 (75%), Gaps = 1/260 (0%)

Query: 54  KSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLR 113
           K L+PKD  DE++ ILE+RAGTGGEEA+LFA D+F+MY RY++KKGWK E++ + E+ L 
Sbjct: 101 KLLIPKDPNDEKNVILEIRAGTGGEEAALFAQDLFRMYTRYAEKKGWKVEILSLNETGLG 160

Query: 114 GYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLR 173
           G KE  A ISG G Y +LK+ESG+HRVQR+P+TE  GR+HTSA +VAILP+A+EVD+ + 
Sbjct: 161 GIKEVIATISGKGAYSRLKYESGVHRVQRIPVTESGGRIHTSAATVAILPEAEEVDIHID 220

Query: 174 NEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKL 233
            +DL+IDTYRS G+GGQH NTT+SAVR+THIPTG+ ++  +ERSQ  N+ KA+K+L A+L
Sbjct: 221 EKDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCSNERSQIQNRIKAMKILRARL 280

Query: 234 YEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL 293
            E+   +        R  QIGSGDRSE+IRTYNFP+ RVTDHR+ +T + + + ++GE L
Sbjct: 281 KELYERQQKEQLDSARRSQIGSGDRSEKIRTYNFPENRVTDHRIKLTLYNLEEFLDGE-L 339

Query: 294 DIFIDALLLQQEMDAIASFG 313
           D  IDAL   ++ + I +  
Sbjct: 340 DEMIDALTAAEQAEKIEALA 359


>gi|339485721|ref|YP_004700249.1| peptide chain release factor 1 [Pseudomonas putida S16]
 gi|431800788|ref|YP_007227691.1| peptide chain release factor 1 [Pseudomonas putida HB3267]
 gi|338836564|gb|AEJ11369.1| peptide chain release factor 1 [Pseudomonas putida S16]
 gi|430791553|gb|AGA71748.1| peptide chain release factor 1 [Pseudomonas putida HB3267]
          Length = 360

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 219/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D D+ +MA EE+  A ++   L+S L + LLPKD  D R
Sbjct: 54  EWRKVQDDLEGAQALLKDS--DPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGE 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTYR+
Sbjct: 172 SVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  ++  I+ LL + 
Sbjct: 292 IATERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILAG-GVEAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|225849764|ref|YP_002729998.1| peptide chain release factor 1 [Persephonella marina EX-H1]
 gi|254790894|sp|C0QTI3.1|RF1_PERMH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|225646004|gb|ACO04190.1| peptide chain release factor 1 [Persephonella marina EX-H1]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/307 (50%), Positives = 221/307 (71%), Gaps = 11/307 (3%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  E +   K+I+  KSL+   + D++M  +A EEL      ++ L+  +   LLPKD  
Sbjct: 52  LYKEYKKVLKDIEETKSLL--NNPDEEMRLLAEEELKNLNQRKEELEKEIQIELLPKDPN 109

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DE++ ILE+R G GGEEA+LFA ++F+MY+RY+++KGWK EV+ +  +D  G KE  A I
Sbjct: 110 DEKNVILEIRQGAGGEEAALFAGELFRMYQRYAERKGWKVEVLSMHPTDRGGIKEVIALI 169

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LKFESG+HRVQRVP TE SGR+HTS  +VA+LP+A+EVD+ ++ E+L+I+T 
Sbjct: 170 KGQGAYSRLKFESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKPEELKIETM 229

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE----MER 238
           R+ G+GGQH NTT+SAVR+THIPTG+ +S QDERSQ  N+AKA+++L A+L +    +ER
Sbjct: 230 RASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQLQNRAKAMQILRARLKDYYDRLER 289

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            +I     K R  Q+G+GDRSE+IRTYNFPQ RVTDHR+  T H + D+++G +LD  ID
Sbjct: 290 EKI----EKERRMQVGTGDRSEKIRTYNFPQNRVTDHRINYTSHRLHDILDG-DLDEIID 344

Query: 299 ALLLQQE 305
            L+ +++
Sbjct: 345 QLIAKEQ 351


>gi|254373464|ref|ZP_04988952.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151571190|gb|EDN36844.1| peptide chain release factor 1 [Francisella novicida GA99-3549]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|254374925|ref|ZP_04990406.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
 gi|151572644|gb|EDN38298.1| peptide chain release factor 1 [Francisella novicida GA99-3548]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|385793515|ref|YP_005826491.1| hypothetical protein [Francisella cf. novicida Fx1]
 gi|332678840|gb|AEE87969.1| Peptide chain release factor 1 [Francisella cf. novicida Fx1]
          Length = 361

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQTAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|291276374|ref|YP_003516146.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
 gi|290963568|emb|CBG39400.1| peptide chain release factor 1 [Helicobacter mustelae 12198]
          Length = 352

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 145/275 (52%), Positives = 201/275 (73%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           EDK +  MA EEL +  +  K L+  +   L+PKD  D ++  LE+RAGTGG+EA +F  
Sbjct: 68  EDKALAGMAKEELEVLRERAKNLEESIKTLLIPKDPNDGKNIYLELRAGTGGDEAGIFVG 127

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+ Y RY+  K WK E++  +E+++ GYKE  A I G GVY +LKFESG HRVQRVP 
Sbjct: 128 DLFRAYCRYADLKKWKVEIISSSENNVGGYKEIIALIKGEGVYSRLKFESGTHRVQRVPA 187

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA++VA++P+ DEV+V L   DLRI+ +R+GG GGQ  NTT+SAVR+THIP
Sbjct: 188 TESQGRIHTSAITVALMPEVDEVEVVLNPSDLRIEVFRAGGHGGQCVNTTDSAVRITHIP 247

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +SIQDE+SQH NK KALK+L +++Y+ +  +  +  ++ R  Q+GSGDRSERIRTY
Sbjct: 248 TGINVSIQDEKSQHKNKEKALKILRSRIYDAQMEQQQVQNAQTRKNQVGSGDRSERIRTY 307

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           N+PQ R+TDHR+G+T +++ ++M   NLD  ID L
Sbjct: 308 NYPQNRLTDHRIGLTLYSLEEVMLSGNLDPIIDPL 342


>gi|39933683|ref|NP_945959.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192289040|ref|YP_001989645.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
 gi|61214634|sp|Q6NC66.1|RF1_RHOPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229470355|sp|B3QCF6.1|RF1_RHOPT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|39647529|emb|CAE26050.1| peptide chain release factor 1 [Rhodopseudomonas palustris CGA009]
 gi|192282789|gb|ACE99169.1| peptide chain release factor 1 [Rhodopseudomonas palustris TIE-1]
          Length = 361

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 147/313 (46%), Positives = 218/313 (69%), Gaps = 2/313 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           +   R  + E+  +  L+ + + + +M  MA  E   L    ++ +Q + + +LLPKD  
Sbjct: 49  VKSYRQVRDELGEIDELLEDPATEPEMRAMAEAERDALDAHRDELIQQIRI-ALLPKDAM 107

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           DER+ +LE+RAGTGG+EASLFA D+F+MYE+++  +GW  EV+  +E  + GYKE  A +
Sbjct: 108 DERNVMLEIRAGTGGDEASLFAGDLFRMYEKFAALQGWSVEVISASEGTVGGYKEIIAEV 167

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G + KLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++VDV ++ +DLRI+T 
Sbjct: 168 KGRGAFAKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEVEDVDVDIKQDDLRIETM 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T SA+R+TH+PTG+ + +QD RSQH N+A A+ +L +++Y+ E+ R+ 
Sbjct: 228 RAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRIYDAEQQRLD 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            +RS  R  ++GSGDRSERIRTYNFPQGRVTDHR+ +T + +  ++ GE L   IDAL  
Sbjct: 288 AARSAERKAKVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTT 347

Query: 303 QQEMDAIASFGST 315
           + +   +A  G+ 
Sbjct: 348 EHQAAQLAEQGNA 360


>gi|221632126|ref|YP_002521347.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
 gi|221155596|gb|ACM04723.1| peptide chain release factor 1 [Thermomicrobium roseum DSM 5159]
          Length = 363

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 142/276 (51%), Positives = 208/276 (75%), Gaps = 1/276 (0%)

Query: 25  SEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           +ED D++++A EE+    +  + +   L + L+P+D  DE+D I+E+RAGTGGEEA+LFA
Sbjct: 74  AEDPDLVELAAEEIDRLREYRETIYQELRRRLVPRDPNDEKDVIVEIRAGTGGEEAALFA 133

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++++GWK EV+  + ++L G+KE    + G G Y   K ESG+HRVQRVP
Sbjct: 134 ADLFRMYTRYAERQGWKVEVLSSSPTELGGFKEIIFEVRGKGAYSHFKHESGVHRVQRVP 193

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           +TE SGR+HTS  +VA+LP+ADEV+V +  +DLRI+ +RS G GGQ  NTT+SAVR+TH+
Sbjct: 194 ITESSGRIHTSTATVAVLPEADEVEVHIDEDDLRIEVFRSSGHGGQSVNTTDSAVRITHL 253

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +S QDERSQ  N+ KA+ VL A+LYE++R ++   R+ LR +Q+G+G+R+E+IRT
Sbjct: 254 PTGIVVSCQDERSQLKNRLKAMAVLRARLYELQRRKLEEERTGLRRQQVGTGERAEKIRT 313

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           YNFPQ RVTDHR+ +T + +  +++GE +DIFI  L
Sbjct: 314 YNFPQDRVTDHRLKLTVNNLPAVLDGE-IDIFIQEL 348


>gi|208779474|ref|ZP_03246819.1| peptide chain release factor 1 [Francisella novicida FTG]
 gi|208744435|gb|EDZ90734.1| peptide chain release factor 1 [Francisella novicida FTG]
          Length = 361

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|442803675|ref|YP_007371824.1| peptide chain release factor 1 [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
 gi|442739525|gb|AGC67214.1| peptide chain release factor 1 [Clostridium stercorarium subsp.
           stercorarium DSM 8532]
          Length = 356

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 136/257 (52%), Positives = 202/257 (78%), Gaps = 2/257 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           ++PKD  DE++ I+E+R G GGEEA+LF+ D+++M+ RY+++K W +E++   E++L G+
Sbjct: 99  MMPKDPNDEKNVIIEIRGGAGGEEAALFSADLYRMFTRYAERKNWTYEIIDANETELGGF 158

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRN 174
           KE   +I G G Y +LK+ESG+HRVQRVP TE SGR+HTS V+VA+LP+ D+V +V++  
Sbjct: 159 KEIIFSIEGKGAYSRLKYESGVHRVQRVPTTESSGRIHTSTVTVAVLPEVDDVPEVQINP 218

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
            D+R+DT+R+ G+GGQH N T+SA+R+THIPTG+ ++ QDERSQH N+ KA++VL AKLY
Sbjct: 219 SDIRVDTFRASGAGGQHVNKTSSAIRITHIPTGIVVTCQDERSQHRNREKAMRVLKAKLY 278

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           E+ +S+I+   ++ R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + +  +++G +LD
Sbjct: 279 ELAQSKINNEIAENRRMQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLDQILDG-DLD 337

Query: 295 IFIDALLLQQEMDAIAS 311
             IDAL+ + +   IAS
Sbjct: 338 ELIDALITEDQARKIAS 354


>gi|387825191|ref|YP_005824662.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
 gi|332184657|gb|AEE26911.1| Peptide chain release factor 1 [Francisella cf. novicida 3523]
          Length = 361

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANETIEKLESELQILLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|225548553|ref|ZP_03769601.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
 gi|225370816|gb|EEH00251.1| peptide chain release factor 1 [Borrelia burgdorferi 94a]
          Length = 357

 Score =  312 bits (799), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 144/283 (50%), Positives = 209/283 (73%), Gaps = 3/283 (1%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKR-LQSLLLKSLLPKDDADERDCILEVRAGTGGEE 79
           I E  + ++M ++  +EL + +D++K  L+  +   LLP+D+ D ++ I+E+RAGTGGEE
Sbjct: 65  ILEKEDQQEMKELIKQEL-IDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEE 123

Query: 80  ASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHR 139
           A+LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HR
Sbjct: 124 AALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHR 183

Query: 140 VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAV 199
           VQR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAV
Sbjct: 184 VQRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAV 243

Query: 200 RVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRS 259
           R+TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRS
Sbjct: 244 RITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRS 303

Query: 260 ERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           ERIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L++
Sbjct: 304 ERIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLMI 345


>gi|218783033|ref|YP_002434351.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
 gi|226739100|sp|B8FEA2.1|RF1_DESAA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|218764417|gb|ACL06883.1| peptide chain release factor 1 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 355

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/287 (52%), Positives = 207/287 (72%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D D+ D+A EE+     E+ RL+  L   LLPKD  D+++ ILE+RAGTGG+EA LFA D
Sbjct: 69  DPDIKDLAKEEIDRLDKEQVRLEDELKILLLPKDPNDDKNVILEIRAGTGGDEAGLFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ +GWK E +    + + G KE +A I+G GVY   KFESG HRVQRVP+T
Sbjct: 129 LFRMYSRYAETRGWKVETLSEHLTGVGGIKEIAAMITGQGVYSAFKFESGTHRVQRVPVT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+A+EVD+++   ++R+D YRS G+GGQH NTT+SAVR+TH+PT
Sbjct: 189 EAQGRIHTSACTVAVLPEAEEVDIQIDPSEIRVDVYRSQGAGGQHVNTTDSAVRLTHLPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++ QDE+SQH NKAKA+KVL A+L +      + S S  R  Q+GSGDRSERIRTYN
Sbjct: 249 GVVVTCQDEKSQHKNKAKAMKVLRARLLDHAVQEQNASISAERKSQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           +PQGRVTDHR+G+T + +  +M G+  +I +DAL      +A+   G
Sbjct: 309 YPQGRVTDHRIGLTLYKLESIMAGQISEI-VDALTTHYNAEALQEGG 354


>gi|195941927|ref|ZP_03087309.1| peptide chain release factor 1 [Borrelia burgdorferi 80a]
          Length = 357

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/282 (50%), Positives = 206/282 (73%), Gaps = 1/282 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYRLEEFMQGE-LDPLLDPLMI 345


>gi|333996135|ref|YP_004528748.1| peptide chain release factor 1 [Treponema azotonutricium ZAS-9]
 gi|333735566|gb|AEF81515.1| peptide chain release factor 1 [Treponema azotonutricium ZAS-9]
          Length = 356

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 143/260 (55%), Positives = 201/260 (77%), Gaps = 5/260 (1%)

Query: 43  DEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKF 102
           D E RL+ LL+    P+D  DE++ I+E+RAGTGGEEA+LFA D+F+MY R+++ +GWKF
Sbjct: 90  DAEDRLKFLLI----PRDPLDEKNIIMEIRAGTGGEEAALFAADLFRMYSRFAETRGWKF 145

Query: 103 EVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAIL 162
           E++   E++L G KE   +ISG  VY  +++ESG+HRVQRVP TE SGR+HTSAV+VA+L
Sbjct: 146 EIMNSNETELGGLKEIVFSISGKNVYENMRYESGVHRVQRVPATEASGRIHTSAVTVAVL 205

Query: 163 PQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNK 222
           P+ADE ++ ++ EDLRID  R+GG GGQ  NTT+SAVR+THIP+G+ +  QDE+SQ  NK
Sbjct: 206 PEADETEIDIKQEDLRIDVMRAGGPGGQCVNTTDSAVRITHIPSGLVVHCQDEKSQIKNK 265

Query: 223 AKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH 282
           AKA++VL A++YEME ++    R++ R  Q+G+GDRSERIRTYNFPQ R+TDHR+ +T +
Sbjct: 266 AKAMRVLRARIYEMEEAKAASERAEARKSQVGTGDRSERIRTYNFPQNRLTDHRINLTLY 325

Query: 283 AISDMMEGENLDIFIDALLL 302
            +  +M+G+  ++F DAL L
Sbjct: 326 KLDLIMQGDVEELF-DALKL 344


>gi|417644436|ref|ZP_12294426.1| peptide chain release factor 1 [Staphylococcus warneri VCU121]
 gi|330684805|gb|EGG96498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU121]
          Length = 358

 Score =  312 bits (799), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/307 (49%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E+  ++ ++ E S DK+ ++M  EE     +E   ++  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELADIEEMLNETS-DKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++   +K E+V V+ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEAHHFKTEIVEVSESDHGGYKEISFSVSGNGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   +S +MEG NLD  IDAL L ++ D
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLSQIMEG-NLDEIIDALTLSEQTD 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|409408061|ref|ZP_11256505.1| peptide chain release factor 1 [Herbaspirillum sp. GW103]
 gi|386432517|gb|EIJ45344.1| peptide chain release factor 1 [Herbaspirillum sp. GW103]
          Length = 355

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM   A EE+  A    + L+  L K LLPKD  DER+  LE+RAGTGG+E++L
Sbjct: 63  ELLSDPDMKAFAQEEIDAARARMEALELDLQKMLLPKDPNDERNIFLEIRAGTGGDESAL 122

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E+V  +ES+L GYKE  A I+G G Y +LKFESG HRVQR
Sbjct: 123 FAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIAGFGAYSRLKFESGGHRVQR 182

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADEV DV +   DLRIDTYR+ G+GGQH N T+SAVR+
Sbjct: 183 VPATETQGRIHTSACTVAVMPEADEVEDVDINPADLRIDTYRASGAGGQHINKTDSAVRI 242

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NKA+A+KVL A++ +++        +  R   IGSGDRSER
Sbjct: 243 THLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLREQQSKEAATRKSLIGSGDRSER 302

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD   +AL+ + + + +A  G
Sbjct: 303 IRTYNFPQGRMTDHRINLTLYKLDFIMDG-DLDELTNALITEHQAELLAQLG 353


>gi|254369840|ref|ZP_04985850.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122799|gb|EDO66928.1| peptide chain release factor 1 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 361

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/298 (49%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQIFLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQR+P TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRIPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|163746457|ref|ZP_02153815.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
 gi|161380342|gb|EDQ04753.1| peptide chain release factor 1 [Oceanibulbus indolifex HEL-45]
          Length = 351

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/278 (53%), Positives = 206/278 (74%), Gaps = 2/278 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  +D +M ++A EEL         ++  L  +LLP+D AD +  +LE+R GTGG+EA+L
Sbjct: 62  EMLKDPEMAELAREELPRLRARLPEVEGALQLALLPRDAADAKPAMLEIRPGTGGDEAAL 121

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY+RY++ +GW F+++    ++L G KE  A I+G  V+ +LKFESG+HRVQR
Sbjct: 122 FAGDLLRMYQRYAEARGWGFDLIESQMTELGGVKEVVAHITGQNVFARLKFESGVHRVQR 181

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VA+LP+A++VD+ +   DLRIDT RS G+GGQH NTT+SAVR+T
Sbjct: 182 VPSTESGGRIHTSAATVAVLPEAEDVDIEINANDLRIDTMRSSGAGGQHVNTTDSAVRIT 241

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+ ++   E+SQH N+ KA++VL A+LY+MER RI   RS  R+ Q+GSGDRSERI
Sbjct: 242 HIPTGIVVT-SSEKSQHRNRDKAMQVLKARLYDMERGRIDSERSADRAAQVGSGDRSERI 300

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           RTYNFPQGR+TDHR+ +T + +  +M+G +LD  IDAL
Sbjct: 301 RTYNFPQGRMTDHRINLTLYRLEAVMQG-DLDEIIDAL 337


>gi|429335284|ref|ZP_19215921.1| peptide chain release factor 1 [Pseudomonas putida CSV86]
 gi|428760086|gb|EKX82363.1| peptide chain release factor 1 [Pseudomonas putida CSV86]
          Length = 360

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/309 (47%), Positives = 220/309 (71%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           + R  Q +++G ++L+ +   D D+ +MA EE+  A ++ + L+  L + LLPKD  D R
Sbjct: 54  QWRKLQDDLEGAQALLKDS--DPDLREMAIEEVREAKEQLQALEDQLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEIIARVEGE 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DTYR+
Sbjct: 172 AVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    +
Sbjct: 232 SGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ +++ G  +D  I+ LL + 
Sbjct: 292 MASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDEVLAG-GVDAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|56697312|ref|YP_167678.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
 gi|81558450|sp|Q5LQM7.1|RF1_SILPO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56679049|gb|AAV95715.1| peptide chain release factor 1 [Ruegeria pomeroyi DSS-3]
          Length = 351

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 154/315 (48%), Positives = 218/315 (69%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+LR   ++I   + L  +  E      D DM  +A EEL L        +  L  +LLP
Sbjct: 38  SDLRPVVEQIAAWRQLCADMDEARAMLSDPDMKALAEEELPLLKARLPEAEQALQLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GWK E++ + E++L G KE 
Sbjct: 98  KDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWKLELIELQETELGGIKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A ISG  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A +VD+++   D+R
Sbjct: 158 VARISGENVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQIDPGDIR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            R+   RS  RS Q+G+GDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  ID
Sbjct: 277 QRLDRERSASRSAQVGTGDRSERIRTYNFPQGRMTDHRINLTLYKLDAVMQG-DLDEVID 335

Query: 299 ALLLQQEMDAIASFG 313
           AL    +   +A  G
Sbjct: 336 ALAADGQARMLAEMG 350


>gi|389686011|ref|ZP_10177334.1| peptide chain release factor 1 [Pseudomonas chlororaphis O6]
 gi|399008556|ref|ZP_10711026.1| peptide chain release factor 1 [Pseudomonas sp. GM17]
 gi|425901493|ref|ZP_18878084.1| peptide chain release factor 1 [Pseudomonas chlororaphis subsp.
           aureofaciens 30-84]
 gi|388550353|gb|EIM13623.1| peptide chain release factor 1 [Pseudomonas chlororaphis O6]
 gi|397883269|gb|EJK99755.1| peptide chain release factor 1 [Pseudomonas chlororaphis subsp.
           aureofaciens 30-84]
 gi|398115992|gb|EJM05763.1| peptide chain release factor 1 [Pseudomonas sp. GM17]
          Length = 360

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/304 (49%), Positives = 217/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L+S L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKEQLVELESTLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGENVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLRIDTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+THIP+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEILAG-GVEAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|255065586|ref|ZP_05317441.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
 gi|255050411|gb|EET45875.1| peptide chain release factor 1 [Neisseria sicca ATCC 29256]
          Length = 358

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKVKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +L+   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DLEEITNALIAEHQAELLAAMG 357


>gi|452747687|ref|ZP_21947480.1| peptide chain release factor 1 [Pseudomonas stutzeri NF13]
 gi|452008431|gb|EME00671.1| peptide chain release factor 1 [Pseudomonas stutzeri NF13]
          Length = 360

 Score =  311 bits (798), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 151/304 (49%), Positives = 219/304 (72%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q++++G ++L+ +   D DM +MA EE+  A  + + L++ L + LLPKD  D R+  LE
Sbjct: 59  QQDLEGAQALLKDS--DPDMREMAEEEVTEAKTQLETLEANLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++FA D+F+MY RY++K+GW+ E++  +E +  GYKE  + + G  VY K
Sbjct: 117 IRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   V +   +LR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+PTGM +  Q+ERSQH N+AKA+  L AKL + + +  H   S+ R
Sbjct: 237 QHVNKTDSAIRITHLPTGMVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETR 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHRV +T +++++++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLNEVI-GGAVEQVIEPLLQEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|296127053|ref|YP_003634305.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
 gi|296018869|gb|ADG72106.1| peptide chain release factor 1 [Brachyspira murdochii DSM 12563]
          Length = 358

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 155/308 (50%), Positives = 215/308 (69%), Gaps = 3/308 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELC-LAIDEEKRLQSLLLKSLLPKDDADE 64
           +L+T  KEID    +I     DKD+ +MA  E+  L   +E  + SL L  LLPKD  D 
Sbjct: 51  KLKTVLKEIDDSNEMINNPETDKDLKEMALAEIEELNQKKEDIINSLRL-LLLPKDKNDG 109

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           ++ I+E+R GTGG+E++LF  D+F+MY R+ ++   K E++  + ++L GYKE   ++SG
Sbjct: 110 KNIIIEIRVGTGGDESALFVGDLFRMYSRFIERANLKMEIIDTSPTELGGYKEVIFSVSG 169

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
              Y  LKFESG HRVQR+P TE  GR+HTSA +VA++P+A E DV +++ED+R+D +RS
Sbjct: 170 KNAYRALKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRS 229

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL A++YE E +     
Sbjct: 230 SGPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAK 289

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +K R EQIGSGDRSERIRTYNFPQ RVTDHR+ +T + +   M+GE  +I  DAL  ++
Sbjct: 290 EAKERREQIGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDRFMDGEITEI-TDALFKKE 348

Query: 305 EMDAIASF 312
           + D +AS+
Sbjct: 349 QEDMLASY 356


>gi|418326961|ref|ZP_12938136.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU071]
 gi|418413304|ref|ZP_12986546.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BVS058A4]
 gi|420164484|ref|ZP_14671213.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM095]
 gi|420169228|ref|ZP_14675831.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM087]
 gi|420186327|ref|ZP_14692398.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM040]
 gi|365224067|gb|EHM65337.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU071]
 gi|394231589|gb|EJD77215.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM095]
 gi|394231691|gb|EJD77315.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM087]
 gi|394252544|gb|EJD97576.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM040]
 gi|410879191|gb|EKS27042.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BVS058A4]
          Length = 358

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 148/307 (48%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           +TK++E+  ++ ++ E S DK+ ++M  EE      E   ++  L   L+PKD  D++D 
Sbjct: 52  KTKKEELQDIEDMLNETS-DKEEVEMLKEESSALKTELPEMEEELKILLIPKDPNDDKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+A++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   ++ +MEG NLD  ++AL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEG-NLDEIVEALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|399993158|ref|YP_006573398.1| peptide chain release factor 1 [Phaeobacter gallaeciensis DSM 17395
           = CIP 105210]
 gi|398657713|gb|AFO91679.1| peptide chain release factor 1 [Phaeobacter gallaeciensis DSM 17395
           = CIP 105210]
          Length = 351

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 152/315 (48%), Positives = 219/315 (69%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+LR   ++I   + L+ +  E      D DM ++A EEL          +  L  +LLP
Sbjct: 38  SDLRPVAEQITAYRRLLCDLEEAEQMLADPDMAELAEEELPQLRAALPEAEHALQLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D+AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GW FE++    ++L G KE 
Sbjct: 98  RDEADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWGFEIIEEQTTELGGLKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A + G  V+ +LK+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A++VD+R+   DLR
Sbjct: 158 VAHVKGENVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEDVDLRIDPGDLR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+THIPTG+ I +  E+SQH N+  A++V+  +LY++ER
Sbjct: 218 IDTMRASGAGGQHVNTTDSAVRITHIPTGI-IVVSSEKSQHRNREIAMQVMRTRLYDLER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M+G +LD  ID
Sbjct: 277 QRIDSERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLDQIMQG-DLDEIID 335

Query: 299 ALLLQQEMDAIASFG 313
           AL    +   +A  G
Sbjct: 336 ALTADDQARLLAEMG 350


>gi|118498113|ref|YP_899163.1| peptide chain release factor 1 [Francisella novicida U112]
 gi|194323340|ref|ZP_03057124.1| peptide chain release factor 1 [Francisella novicida FTE]
 gi|166223559|sp|A0Q844.1|RF1_FRATN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|118424019|gb|ABK90409.1| protein chain release factor A [Francisella novicida U112]
 gi|194322704|gb|EDX20184.1| peptide chain release factor 1 [Francisella tularensis subsp.
           novicida FTE]
          Length = 361

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 216/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL LA +  ++L+S L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KQAAYEMLNEKDAELVEMAKEELKLANEAIEKLESELQILLLPRDPNDDANVFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMLMLKSKLLQAEIDKQQKEQSDTRKSLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLVLEHQADLLATM 358


>gi|254476963|ref|ZP_05090349.1| peptide chain release factor 1 [Ruegeria sp. R11]
 gi|214031206|gb|EEB72041.1| peptide chain release factor 1 [Ruegeria sp. R11]
          Length = 351

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 157/318 (49%), Positives = 223/318 (70%), Gaps = 14/318 (4%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELC---LAIDEEKRLQSLLLKS 55
           S+LR   ++I   + L+ +  E      D DM  +A EEL     A+ E +  Q+L L +
Sbjct: 38  SDLRPVAEQIISYRRLLADLDEAEQMLADPDMAALAEEELPGLRAALPEAE--QALQL-A 94

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLP+D AD +  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GW FE++    ++L G 
Sbjct: 95  LLPRDAADSKPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEAQGWTFEIIEEQSTELGGL 154

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A + G  V+ +LK+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A+EVD+R+   
Sbjct: 155 KEVVAHVKGNNVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDLRIDPA 214

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRIDT R+ G+GGQH NTT+SAVR+THIPTG+ I +  E+SQH N+  A++VL  +LY+
Sbjct: 215 DLRIDTMRASGAGGQHVNTTDSAVRITHIPTGI-IVVSSEKSQHRNREIAMQVLRTRLYD 273

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           +ER RI   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M+G +LD 
Sbjct: 274 LERQRIDSERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLDQIMQG-DLDE 332

Query: 296 FIDALLLQQEMDAIASFG 313
            IDAL    +   +A  G
Sbjct: 333 IIDALTADDQARRLAEMG 350


>gi|223043916|ref|ZP_03613957.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
 gi|417906667|ref|ZP_12550448.1| peptide chain release factor 1 [Staphylococcus capitis VCU116]
 gi|222442631|gb|EEE48735.1| peptide chain release factor 1 [Staphylococcus capitis SK14]
 gi|341597669|gb|EGS40215.1| peptide chain release factor 1 [Staphylococcus capitis VCU116]
          Length = 358

 Score =  311 bits (797), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 150/307 (48%), Positives = 217/307 (70%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E++ ++ ++ E S DK+ +DM  EE      E   ++  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELEDIEEMLKETS-DKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   +  +MEG NLD  IDAL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEG-NLDEIIDALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|187918069|ref|YP_001883632.1| peptide chain release factor 1 [Borrelia hermsii DAH]
 gi|238689283|sp|B2RZQ6.1|RF1_BORHD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119860917|gb|AAX16712.1| bacterial peptide chain release factor 1 [Borrelia hermsii DAH]
          Length = 357

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 218/309 (70%), Gaps = 13/309 (4%)

Query: 4   ISELRTKQKEIDGLKSLIYECS------EDKDMLDMATEELC---LAIDEEKRLQSLLLK 54
           + +++ K+ E + + S I E        E+ +M ++  +EL    L  DE + +  +LL 
Sbjct: 42  LEKIKAKKDEYENILSQINENQKILSEEENLEMKELVKQELAHLNLKKDEVEHMIKILL- 100

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
             L +D+ D ++ I+E+RAGTGGEEA+LFA ++++MY +YS+KK WK E++   E++L G
Sbjct: 101 --LHQDENDSKNIIIEIRAGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGG 158

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           +KE S  I G  V+ KLK ESG+HRVQRVP+TE +GR+ TSA +VA+LP+ ++ D+ +  
Sbjct: 159 FKEVSFEIKGKDVFKKLKHESGVHRVQRVPITESNGRLQTSAATVAVLPEVEDTDIEINE 218

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           +DLRID YRS G+GGQH NTT+SAVR+TH+PTG+ +  Q+ERSQH NK +A+K+L A+LY
Sbjct: 219 KDLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLY 278

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           E E  +    RS  R +Q+GSGDRSERIRTYNFPQ RVTDHR  I+ + + ++M+GE LD
Sbjct: 279 EFENLKKQEQRSNDRKQQVGSGDRSERIRTYNFPQNRVTDHRANISLYKLEEIMQGE-LD 337

Query: 295 IFIDALLLQ 303
             +D L L+
Sbjct: 338 FLLDTLALK 346


>gi|409427036|ref|ZP_11261567.1| peptide chain release factor 1 [Pseudomonas sp. HYS]
          Length = 360

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 220/310 (70%), Gaps = 4/310 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++ R  Q ++ G ++L+ +   D D+ +MA EE+  A ++   L++ L + LLPKD  D 
Sbjct: 53  AQWRKVQDDLAGAQALLKDS--DPDLREMAVEEVREAKEQLAVLENQLQRMLLPKDPNDG 110

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G
Sbjct: 111 RNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEG 170

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYR 183
             VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE V + +   DLR+DTYR
Sbjct: 171 DSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQVAIEINPADLRVDTYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + G+GGQH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +++ S    
Sbjct: 231 ASGAGGQHINKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDIQTSAAQN 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  +D  I+ LL +
Sbjct: 291 AMASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDVLAG-GVDAVIEPLLAE 349

Query: 304 QEMDAIASFG 313
            + D +A+ G
Sbjct: 350 YQADQLAALG 359


>gi|224534432|ref|ZP_03675010.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
 gi|224514534|gb|EEF84850.1| peptide chain release factor 1 [Borrelia spielmanii A14S]
          Length = 357

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 142/291 (48%), Positives = 209/291 (71%), Gaps = 1/291 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ ++  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEEVEHEIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYGMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSNNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L ++ +   + S
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLTIELQEQTLKS 354


>gi|51598456|ref|YP_072644.1| peptide chain release factor 1 [Borrelia garinii PBi]
 gi|61214604|sp|Q662G9.1|RF1_BORGA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51573027|gb|AAU07052.1| peptide chain release factor 1 [Borrelia garinii PBi]
          Length = 357

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 206/283 (72%), Gaps = 1/283 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS++K WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L ++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLTIE 346


>gi|317052432|ref|YP_004113548.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
 gi|316947516|gb|ADU66992.1| peptide chain release factor 1 [Desulfurispirillum indicum S5]
          Length = 355

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 159/306 (51%), Positives = 218/306 (71%), Gaps = 10/306 (3%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDML---------DMATEELCLAIDEEKRLQSLLLK 54
           +SELR   +     K++  E +++++ML         +M  +E+     +E++L+  L +
Sbjct: 38  LSELREVVEAFQQFKTVRRELADNQEMLTSEKDRELREMIQQEIQSLRHQEQQLEDTLTE 97

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
            LLP+D  D ++ ILE+RAGTGGEEA+LFA D+F+MY RY+ ++GWK EV+ V E+   G
Sbjct: 98  LLLPRDPNDTKNIILEIRAGTGGEEAALFATDLFRMYSRYADERGWKVEVLSVNETGNGG 157

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           ++E  + I G  VY +LKFESG HRVQRVP TE SGR+HTSAV+VA+LP+A+EVD+ +  
Sbjct: 158 FREIISMIEGRNVYSRLKFESGTHRVQRVPQTESSGRIHTSAVTVAVLPEAEEVDIDINP 217

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
            DLRID YRS G+GGQH NTT+SAVRVTHIPTG++++ Q+ RSQH NK KAL +L ++L 
Sbjct: 218 ADLRIDVYRSSGAGGQHVNTTDSAVRVTHIPTGVSVACQEGRSQHKNKEKALSILRSRLL 277

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           +    +    RS+ R  Q+GSGDRSERIRTYNFPQGRVTDHRV +T H +  ++EG +LD
Sbjct: 278 DHAVQQSDSQRSQDRKLQVGSGDRSERIRTYNFPQGRVTDHRVNLTLHRLEQVLEG-DLD 336

Query: 295 IFIDAL 300
             ID L
Sbjct: 337 EVIDTL 342


>gi|219685818|ref|ZP_03540627.1| peptide chain release factor 1 [Borrelia garinii Far04]
 gi|219672651|gb|EED29681.1| peptide chain release factor 1 [Borrelia garinii Far04]
          Length = 357

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 206/283 (72%), Gaps = 1/283 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS++K WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L ++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDQLLDPLTIE 346


>gi|424660682|ref|ZP_18097929.1| peptide chain release factor 1 [Vibrio cholerae HE-16]
 gi|408050250|gb|EKG85420.1| peptide chain release factor 1 [Vibrio cholerae HE-16]
          Length = 362

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDADMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIDPVIHEHQADQLAALA 359


>gi|225552361|ref|ZP_03773301.1| peptide chain release factor 1 [Borrelia sp. SV1]
 gi|225371359|gb|EEH00789.1| peptide chain release factor 1 [Borrelia sp. SV1]
          Length = 357

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 141/282 (50%), Positives = 206/282 (73%), Gaps = 1/282 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           RIRTYNFPQ R+TDHR  IT + + + ++GE LD  +D L++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFIQGE-LDPLLDPLMI 345


>gi|27468634|ref|NP_765271.1| peptide chain release factor 1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57867593|ref|YP_189289.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251812171|ref|ZP_04826644.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282876474|ref|ZP_06285340.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|293366082|ref|ZP_06612770.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|417646882|ref|ZP_12296734.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
 gi|417656917|ref|ZP_12306595.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
 gi|417660256|ref|ZP_12309845.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
 gi|417909017|ref|ZP_12552767.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU037]
 gi|417912470|ref|ZP_12556162.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU105]
 gi|417913921|ref|ZP_12557582.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU109]
 gi|418604057|ref|ZP_13167424.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU041]
 gi|418607532|ref|ZP_13170762.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU057]
 gi|418609372|ref|ZP_13172525.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU065]
 gi|418613195|ref|ZP_13176211.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU117]
 gi|418617908|ref|ZP_13180794.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU120]
 gi|418622347|ref|ZP_13185099.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU123]
 gi|418623907|ref|ZP_13186601.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU125]
 gi|418627641|ref|ZP_13190213.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU126]
 gi|418629960|ref|ZP_13192453.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU127]
 gi|418663751|ref|ZP_13225260.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU081]
 gi|419768484|ref|ZP_14294606.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           IS-250]
 gi|419771604|ref|ZP_14297655.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           IS-K]
 gi|420166561|ref|ZP_14673245.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM088]
 gi|420171719|ref|ZP_14678254.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM070]
 gi|420173643|ref|ZP_14680134.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM067]
 gi|420182089|ref|ZP_14688231.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM049]
 gi|420186950|ref|ZP_14692974.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM039]
 gi|420195935|ref|ZP_14701719.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM021]
 gi|420202831|ref|ZP_14708419.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM018]
 gi|420207939|ref|ZP_14713424.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM008]
 gi|420210298|ref|ZP_14715727.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM003]
 gi|420215230|ref|ZP_14720501.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH05005]
 gi|420216735|ref|ZP_14721933.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH05001]
 gi|420220977|ref|ZP_14725932.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH04008]
 gi|420223650|ref|ZP_14728545.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH08001]
 gi|420226177|ref|ZP_14730999.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH06004]
 gi|420228591|ref|ZP_14733340.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH05003]
 gi|420230977|ref|ZP_14735654.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH04003]
 gi|420233583|ref|ZP_14738191.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH051668]
 gi|420236013|ref|ZP_14740544.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH051475]
 gi|421608826|ref|ZP_16050038.1| peptide chain release factor 1 [Staphylococcus epidermidis AU12-03]
 gi|32171533|sp|Q8CNI7.1|RF1_STAES RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71153098|sp|Q5HMA4.1|RF1_STAEQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|27316181|gb|AAO05315.1|AE016749_261 peptide chain release factor RF-1 [Staphylococcus epidermidis ATCC
           12228]
 gi|57638251|gb|AAW55039.1| peptide chain release factor 1 [Staphylococcus epidermidis RP62A]
 gi|251804268|gb|EES56925.1| peptide chain release factor 1 [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294726|gb|EFA87254.1| peptide chain release factor 1 [Staphylococcus epidermidis SK135]
 gi|291319805|gb|EFE60163.1| peptide chain release factor RF1 [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329726142|gb|EGG62614.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU144]
 gi|329734173|gb|EGG70491.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU045]
 gi|329735695|gb|EGG71978.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU028]
 gi|341650682|gb|EGS74498.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU105]
 gi|341654379|gb|EGS78126.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU109]
 gi|341654657|gb|EGS78396.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU037]
 gi|374404386|gb|EHQ75360.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU057]
 gi|374405853|gb|EHQ76764.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU041]
 gi|374407774|gb|EHQ78622.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU065]
 gi|374411289|gb|EHQ82006.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU081]
 gi|374816631|gb|EHR80832.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU117]
 gi|374817169|gb|EHR81355.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU120]
 gi|374826941|gb|EHR90816.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU123]
 gi|374829087|gb|EHR92901.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU126]
 gi|374829151|gb|EHR92964.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU125]
 gi|374832479|gb|EHR96189.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU127]
 gi|383359848|gb|EID37258.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           IS-250]
 gi|383361102|gb|EID38484.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           IS-K]
 gi|394233568|gb|EJD79169.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM088]
 gi|394236834|gb|EJD82337.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM070]
 gi|394239680|gb|EJD85115.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM067]
 gi|394250553|gb|EJD95735.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM049]
 gi|394256916|gb|EJE01840.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM039]
 gi|394262536|gb|EJE07298.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM021]
 gi|394269010|gb|EJE13555.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM018]
 gi|394274959|gb|EJE19354.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM008]
 gi|394276532|gb|EJE20870.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM003]
 gi|394282510|gb|EJE26703.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH05005]
 gi|394285427|gb|EJE29506.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH04008]
 gi|394287148|gb|EJE31115.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH08001]
 gi|394291414|gb|EJE35226.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH05001]
 gi|394292663|gb|EJE36403.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH06004]
 gi|394294625|gb|EJE38296.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH05003]
 gi|394295860|gb|EJE39496.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH04003]
 gi|394299865|gb|EJE43393.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH051668]
 gi|394301649|gb|EJE45104.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIH051475]
 gi|406655479|gb|EKC81906.1| peptide chain release factor 1 [Staphylococcus epidermidis AU12-03]
          Length = 358

 Score =  311 bits (796), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 148/307 (48%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           +TK++E+  ++ ++ E S DK+ ++M  EE      E   ++  L   L+PKD  D++D 
Sbjct: 52  KTKKEELQDIEDMLNETS-DKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+A++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   ++ +MEG NLD  ++AL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEG-NLDEIVEALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|186477469|ref|YP_001858939.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
 gi|238691299|sp|B2JHK8.1|RF1_BURP8 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|184193928|gb|ACC71893.1| peptide chain release factor 1 [Burkholderia phymatum STM815]
          Length = 360

 Score =  311 bits (796), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  + +  + L+S L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLSDASMKDFAEEEIRASRERMETLESELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E++  +ESDL GYKE    I+G   Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +MEG +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRLTDHRINLTLYRLESIMEG-DLDELIAALVSEHQAELLASLG 357


>gi|386749203|ref|YP_006222410.1| peptide chain release factor 1 [Helicobacter cetorum MIT 00-7128]
 gi|384555446|gb|AFI03780.1| peptide chain release factor 1 [Helicobacter cetorum MIT 00-7128]
          Length = 352

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 145/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L+S + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEVKKGELESTIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DLRI+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLRIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HIPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLTNAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|188996904|ref|YP_001931155.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931971|gb|ACD66601.1| peptide chain release factor 1 [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 360

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 155/316 (49%), Positives = 233/316 (73%), Gaps = 10/316 (3%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           ++L +E +   ++I+ +K L+   + D D+ ++A EEL     +++ L+  +  +LLPKD
Sbjct: 49  LNLYNEYKKVSRQIEEVKQLL-NSTPDDDLRELAEEELESLKKQQEDLEKKIEIALLPKD 107

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             DE++ ILE+R G GG+EASLFA ++F+MY+RY+++ GWK E++ +  ++  G KE  A
Sbjct: 108 PNDEKNVILEIRQGAGGDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIA 167

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G G Y +LK+ESG+HRVQRVP TE SGR+HTS V+VA+LP+A+EVD+ ++ E+L+I+
Sbjct: 168 LIKGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTVTVAVLPEAEEVDIEIKPEELKIE 227

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKL---YE-M 236
           T R+GG+GGQH NTT+SAVR+THIPTGM ++ QDERSQ  NK KA+++L A+L   YE +
Sbjct: 228 TMRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERL 287

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           E+ +I    +K R EQ+G+G+RSE+IRTYNFPQ RVTDHRV  T + I+D+M+G +LD  
Sbjct: 288 EKEKI----AKERKEQVGTGERSEKIRTYNFPQNRVTDHRVNYTSYRINDIMDG-DLDEI 342

Query: 297 IDALLLQQEMDAIASF 312
           ID L+ ++  + +A+ 
Sbjct: 343 IDVLIAKENEEKLANL 358


>gi|167031789|ref|YP_001667020.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
 gi|189039985|sp|B0KNE4.1|RF1_PSEPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166858277|gb|ABY96684.1| peptide chain release factor 1 [Pseudomonas putida GB-1]
          Length = 360

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 149/304 (49%), Positives = 217/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D D+ +MA EE+  A ++   L+S L + LLPKD  D R+  LE
Sbjct: 59  QGDLEGAQALLKDS--DPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++K+GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GRVHTSA +VA+LP+ DE   + +   DLR+DTYR+ G+GG
Sbjct: 177 LKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+PTG+ +  Q+ERSQH N+A+A+  L AKL +M+ S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYN+PQGRVTDHR+ +T +++ D++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSG-GVEAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|387827112|ref|YP_005806394.1| peptide chain release factor 1 [Borrelia burgdorferi N40]
 gi|312148979|gb|ADQ29050.1| peptide chain release factor 1 [Borrelia burgdorferi N40]
          Length = 357

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 141/282 (50%), Positives = 206/282 (73%), Gaps = 1/282 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS+KK WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSEKKKWKTEIINFNETELGGFKEIIFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQ+ NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQYKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLMI 345


>gi|254419936|ref|ZP_05033660.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
 gi|196186113|gb|EDX81089.1| peptide chain release factor 1 [Brevundimonas sp. BAL3]
          Length = 355

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/319 (47%), Positives = 221/319 (69%), Gaps = 12/319 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           +EL+     + GL  L  E ++      D +M  MA +EL    +   +++  +   L P
Sbjct: 39  AELKPVADAVQGLARLRAEMADLEVMAADPEMAAMAQDELRDLTERLPQMERDVALLLAP 98

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D  +    +LEVRAGTGG+EA+LFA D+F+MY RY+  +GW+ E+   TE D  GYKE 
Sbjct: 99  RDADENASAVLEVRAGTGGDEAALFAGDLFRMYSRYAATRGWRIELDSATEGDAGGYKEI 158

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A ++G GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++V++ +  +D+R
Sbjct: 159 IATVTGDGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVEDVEIEILEKDIR 218

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT+R+ GSGGQH N T+SAVR+TH+PTG+ ++   E+SQH+N+ KA+K L  +LY+M+R
Sbjct: 219 IDTFRASGSGGQHVNKTDSAVRITHLPTGI-VATSSEKSQHVNRDKAMKNLRVRLYDMQR 277

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
               L+R+  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H++  ++EG +LD  ++
Sbjct: 278 QAKDLARADSRKSQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHSLPQILEG-DLDPMLN 336

Query: 299 ALLLQQE----MDAIASFG 313
           AL+ + +     D  A FG
Sbjct: 337 ALIAEDQAARLADLEAEFG 355


>gi|314934187|ref|ZP_07841548.1| peptide chain release factor 1 [Staphylococcus caprae C87]
 gi|313653092|gb|EFS16853.1| peptide chain release factor 1 [Staphylococcus caprae C87]
          Length = 358

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 217/307 (70%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E++ ++ ++ E S DK+ +DM  EE      E   ++  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELEDIEEMLKETS-DKEEVDMLKEESASLKAELPEMEEELKILLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEAYGFKTEIVEASESDHGGYKEISFSVSGSGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSER+RTYN+PQ RVTDHR+G+T   +  +MEG NLD  IDAL L ++ +
Sbjct: 290 QRKSAVGTGDRSERVRTYNYPQSRVTDHRIGLTLQKLGQIMEG-NLDEIIDALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|217967194|ref|YP_002352700.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
 gi|226739103|sp|B8E003.1|RF1_DICTD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|217336293|gb|ACK42086.1| peptide chain release factor 1 [Dictyoglomus turgidum DSM 6724]
          Length = 367

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 214/298 (71%), Gaps = 2/298 (0%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           KE + L+ ++ E  +D+D+  +A  EL    ++ ++++  L   LLPKD  DE++ I+E+
Sbjct: 61  KEKEDLEEMVKE-EQDEDLRSLAETELEDIQEKLEKVEFELKALLLPKDPNDEKNIIMEI 119

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGGEEA+LFA D+F+MY  Y+QKKGWK E+V    + L G+KE    + G G Y +L
Sbjct: 120 RAGTGGEEAALFAADLFRMYLGYAQKKGWKVEIVSSNPTGLGGFKEIIFIVEGKGAYSRL 179

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQRVP+TE SGR+HTS  +VA+LP+ +E++V +  +DLRI+T+RSGG+GGQH
Sbjct: 180 KFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEIEVEIDPKDLRIETFRSGGAGGQH 239

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            N T S VR+THIP+G+ +  QDERSQH N+ KA+KVL A+LYE  +       +  R +
Sbjct: 240 VNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYEYYQREKENEIASQRRQ 299

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           Q+G+G+RSE+IRTYNFPQ RVTDHR+  +   + +++ GE LD FID L+L ++ + I
Sbjct: 300 QVGTGERSEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGE-LDEFIDRLILAEKEEQI 356


>gi|445059136|ref|YP_007384540.1| peptide chain release factor 1 [Staphylococcus warneri SG1]
 gi|443425193|gb|AGC90096.1| peptide chain release factor 1 [Staphylococcus warneri SG1]
          Length = 358

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/307 (48%), Positives = 217/307 (70%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E+  ++ ++ E S DK+ ++M  EE     +E   ++  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELADIEEMLNETS-DKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++   +K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEAHHFKTEIVEASESDHGGYKEISFSVSGNGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   +S +MEG NLD  IDAL L ++ D
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLSQIMEG-NLDEIIDALTLSEQTD 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|410669049|ref|YP_006921420.1| peptide chain release factor 1 [Thermacetogenium phaeum DSM 12270]
 gi|409106796|gb|AFV12921.1| peptide chain release factor 1 [Thermacetogenium phaeum DSM 12270]
          Length = 363

 Score =  310 bits (795), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 152/296 (51%), Positives = 215/296 (72%), Gaps = 2/296 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E +   +EI+  KSL+ E S D ++ D+A  EL     +++ L+  L   LLP+D  DE+
Sbjct: 50  EFKKTCQEIESTKSLLEE-SADAELRDLAEAELVELRKKKESLEEELKIMLLPRDPRDEK 108

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + I+E+RAGTGGEEA+LFA D+F+MY  Y++++GWK EV+    +D+ G+KE    +SG 
Sbjct: 109 NVIVEIRAGTGGEEAALFAGDLFRMYSYYAEQQGWKVEVLSSHATDMGGFKEIIFQVSGD 168

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
            VY KLK+ESG+HRVQR+P+TE +GR+HTSA +VA+LP+A+EVDV +  +DLRID + S 
Sbjct: 169 HVYSKLKYESGVHRVQRIPVTESAGRIHTSAATVAVLPEAEEVDVEINPQDLRIDIFCSS 228

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT SAVR+THIPTG+ ++ QDE+SQH NK KA++VL A+L +  +       
Sbjct: 229 GPGGQSVNTTQSAVRITHIPTGIVVTCQDEKSQHKNKEKAMRVLRARLLDRAQKEQQGEL 288

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           S LR   +GSGDRSERIRTYNFPQGRVTDHR+G+T + + ++++G +L+  I AL+
Sbjct: 289 SSLRRSMVGSGDRSERIRTYNFPQGRVTDHRIGLTIYRLPEILKG-DLEELITALI 343


>gi|397165406|ref|ZP_10488857.1| peptide chain release factor 1 [Enterobacter radicincitans DSM
           16656]
 gi|396093063|gb|EJI90622.1| peptide chain release factor 1 [Enterobacter radicincitans DSM
           16656]
          Length = 360

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 211/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  +EVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELRDAKEKSEQLEQHLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++   E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIVQEYQADQLAAL 356


>gi|111115018|ref|YP_709636.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|384206694|ref|YP_005592415.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|119361512|sp|Q0SNW8.1|RF1_BORAP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|110890292|gb|ABH01460.1| peptide chain release factor 1 [Borrelia afzelii PKo]
 gi|342856577|gb|AEL69425.1| peptide chain release factor 1 [Borrelia afzelii PKo]
          Length = 357

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 137/256 (53%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLP+D+ D ++ I+E+RAGTGGEEA+LFA +++ MY +YS+KK WK E++   E++L G+
Sbjct: 100 LLPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGF 159

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE    I G  V+ KLK+ESG+HRVQR+P+TE +GR+ TSA +VA+LP  +E ++ +  +
Sbjct: 160 KEIIFEIKGKDVFKKLKYESGVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEK 219

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRID YRS G+GGQH NTT+SAVR+TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE
Sbjct: 220 DLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYE 279

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            E S+    RS  R +Q+GSGDRSERIRTYNFPQ R+TDHR  IT + + + M+GE LD 
Sbjct: 280 FEDSKKQEQRSNNRKQQVGSGDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDQ 338

Query: 296 FIDALLLQQEMDAIAS 311
            +D L ++ +   + S
Sbjct: 339 LLDPLTIELQEQTLKS 354


>gi|417821512|ref|ZP_12468126.1| peptide chain release factor 1 [Vibrio cholerae HE39]
 gi|422911020|ref|ZP_16945648.1| peptide chain release factor 1 [Vibrio cholerae HE-09]
 gi|423956678|ref|ZP_17735232.1| peptide chain release factor 1 [Vibrio cholerae HE-40]
 gi|423985466|ref|ZP_17738783.1| peptide chain release factor 1 [Vibrio cholerae HE-46]
 gi|340039143|gb|EGR00118.1| peptide chain release factor 1 [Vibrio cholerae HE39]
 gi|341632662|gb|EGS57522.1| peptide chain release factor 1 [Vibrio cholerae HE-09]
 gi|408657222|gb|EKL28309.1| peptide chain release factor 1 [Vibrio cholerae HE-40]
 gi|408663808|gb|EKL34658.1| peptide chain release factor 1 [Vibrio cholerae HE-46]
          Length = 362

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDADMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIDPVIHEHQADQLAALA 359


>gi|216263966|ref|ZP_03435960.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
 gi|215980010|gb|EEC20832.1| peptide chain release factor 1 [Borrelia afzelii ACA-1]
          Length = 357

 Score =  310 bits (795), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 137/256 (53%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLP+D+ D ++ I+E+RAGTGGEEA+LFA +++ MY +YS+KK WK E++   E++L G+
Sbjct: 100 LLPQDENDSKNIIIEIRAGTGGEEAALFANNLYSMYIKYSEKKKWKTEIINFNETELGGF 159

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE    I G  V+ KLK+ESG+HRVQR+P+TE +GR+ TSA +VA+LP  +E ++ +  +
Sbjct: 160 KEIIFEIKGKDVFKKLKYESGVHRVQRIPITESNGRLQTSAATVAVLPNIEETEIDINEK 219

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRID YRS G+GGQH NTT+SAVR+TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE
Sbjct: 220 DLRIDVYRSSGAGGQHVNTTDSAVRITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYE 279

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
            E S+    RS  R +Q+GSGDRSERIRTYNFPQ R+TDHR  IT + + + M+GE LD 
Sbjct: 280 FEDSKKQEQRSNNRKQQVGSGDRSERIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDQ 338

Query: 296 FIDALLLQQEMDAIAS 311
            +D L ++ +   + S
Sbjct: 339 LLDPLTIELQEQTLKS 354


>gi|421720989|ref|ZP_16160266.1| peptide chain release factor 1 [Helicobacter pylori R055a]
 gi|407225773|gb|EKE95543.1| peptide chain release factor 1 [Helicobacter pylori R055a]
          Length = 352

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 208/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EAS+
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEASI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|339503870|ref|YP_004691290.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
 gi|338757863|gb|AEI94327.1| peptide chain release factor 1 [Roseobacter litoralis Och 149]
          Length = 351

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 158/319 (49%), Positives = 225/319 (70%), Gaps = 16/319 (5%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDML---DMATEELCLAIDEEKRLQSLL-------LK 54
           S+LR   ++I   + L+ +  +  +ML   DMA     LA +E  RL+S L         
Sbjct: 38  SDLRPVVEQISAYQQLLNDLEDAAEMLGDPDMA----PLAEEEIPRLKSALPQAEAALQL 93

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           +LLPKD AD +  +LE+R GTGG+EA+LFA D+F+MY+RY++ +GWK +V+ + E++L G
Sbjct: 94  ALLPKDKADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDVIELQETELGG 153

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
            KE  A I G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +  
Sbjct: 154 IKEVVAHIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIEA 213

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
            DLRIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY
Sbjct: 214 NDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKARLY 272

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           ++ERSR+   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +++G +LD
Sbjct: 273 DLERSRVDDERSADRAAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYRLDAILQG-DLD 331

Query: 295 IFIDALLLQQEMDAIASFG 313
             IDAL    +   +A  G
Sbjct: 332 EIIDALTAHAQAQLMADMG 350


>gi|389873756|ref|YP_006381175.1| peptide chain release factor 1 [Advenella kashmirensis WT001]
 gi|388539005|gb|AFK64193.1| peptide chain release factor 1 [Advenella kashmirensis WT001]
          Length = 361

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 153/292 (52%), Positives = 213/292 (72%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           + S D ++ +MA EEL LA    + LQ  L   LLP+D  D R   LEVRAGTGG+E+++
Sbjct: 67  DMSSDPELREMAEEELKLAKARLEELQEQLQVQLLPRDPDDGRSVFLEVRAGTGGDESAI 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F+ D+F+MY RY+++KGWK EV+   ES++ GY+E  A + G GVYG+LK+ESG HRVQR
Sbjct: 127 FSGDLFRMYSRYAEQKGWKVEVISENESEMGGYREVIARVDGDGVYGRLKYESGAHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GRVHTSA +VA+LP+ADE+ +V L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPETESQGRVHTSACTVAVLPEADEIAEVALNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+    QD+RSQH NKA+A+ VL A++ ++ER +     +  R   +G+GDRSER
Sbjct: 247 THIPTGIVAECQDDRSQHKNKARAMSVLAARINDIERQKQQQKEAAERKSLVGTGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T + ++ +MEG +LD    AL+ +++ + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLYKLAQIMEG-SLDELTGALIAERQAELLAALG 357


>gi|242309130|ref|ZP_04808285.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
 gi|239524171|gb|EEQ64037.1| peptide chain release factor 1 [Helicobacter pullorum MIT 98-5489]
          Length = 356

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 143/288 (49%), Positives = 209/288 (72%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +DK++ D+A EE+  A  + + L+S +   LLPKD  DE++  LE+RAGTGG+EA +F  
Sbjct: 67  DDKELGDLAKEEIKEAEAQNQELESEIKVLLLPKDPNDEKNIYLELRAGTGGDEAGIFVG 126

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+FK Y RY++ KGWK E++   E++  GYKE  A I G G Y +LK+E G HRVQRVP 
Sbjct: 127 DLFKAYVRYAESKGWKVEIISSNENNFGGYKEVIALIKGKGAYSRLKYEGGTHRVQRVPE 186

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+THIP
Sbjct: 187 TESQGRIHTSAITVAIMPEVDDVEVVINPNDLKIEVFRAGGHGGQCVNTTDSAVRITHIP 246

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+++S+QDE+SQH NK KALK+L A++YE E        ++ R  Q+GSGDRSERIRTY
Sbjct: 247 TGISVSMQDEKSQHKNKDKALKILKARIYEAELEAQMEQNAEARKSQVGSGDRSERIRTY 306

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQ R++DHR+G+T +++ ++M   +LD  I+ ++   + +A+ + G
Sbjct: 307 NYPQNRLSDHRIGLTLYSLEEIMLNGDLDQVIEPIIAYFQAEALQNSG 354


>gi|237756512|ref|ZP_04585042.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691328|gb|EEP60406.1| peptide chain release factor 1 [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 360

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 157/316 (49%), Positives = 230/316 (72%), Gaps = 10/316 (3%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           ++L +E +   ++I+ +K L+   + D D+ ++A EEL       + L+  +  +LLPKD
Sbjct: 49  LNLYNEYKKVNRQIEEVKQLL-NSTPDDDLRELAEEELESLKKHREDLEKKIEIALLPKD 107

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             DER+ ILE+R G GG+EASLFA ++F+MY+RY+++ GWK E++ +  ++  G KE  A
Sbjct: 108 PNDERNVILEIRQGAGGDEASLFAAELFRMYQRYAERHGWKTEILSLHPTEKGGIKEVIA 167

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            I G G Y +LK+ESG+HRVQRVP TE SGR+HTS V+VA+LP+A+EVD+ ++ E+LRI+
Sbjct: 168 LIKGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTVTVAVLPEAEEVDIEIKPEELRIE 227

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKL---YE-M 236
           T R+GG+GGQH NTT+SAVR+THIPTGM ++ QDERSQ  NK KA+++L A+L   YE +
Sbjct: 228 TMRAGGAGGQHVNTTDSAVRITHIPTGMVVTCQDERSQLQNKMKAMQILRARLKDYYERL 287

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           E+ +I    +K R EQ+G+G+RSE+IRTYNFPQ RVTDHRV  T + I+D+M+G +LD  
Sbjct: 288 EKEKI----AKERKEQVGTGERSEKIRTYNFPQNRVTDHRVNYTSYRINDIMDG-DLDEI 342

Query: 297 IDALLLQQEMDAIASF 312
           ID L+ ++  + +A  
Sbjct: 343 IDVLIAKENEEKLAKL 358


>gi|84516322|ref|ZP_01003682.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
 gi|84510018|gb|EAQ06475.1| peptide chain release factor 1 [Loktanella vestfoldensis SKA53]
          Length = 351

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 155/317 (48%), Positives = 219/317 (69%), Gaps = 10/317 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKS-------LL 57
           +ELR     +   K L+ +  + + +L    E   LA DE   L++ L  S       LL
Sbjct: 38  AELRPVVDTVTAYKDLLAQMIDTQALLK-DPEMRALAEDELPELKAALAASEHAVQLALL 96

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD AD R  +LE+R GTGG+EASLFA D+ +MY+RY++  GW+FE++  ++++L G KE
Sbjct: 97  PKDAADARPALLEIRPGTGGDEASLFAGDLLRMYQRYAENMGWRFEILEQSQTELGGIKE 156

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A ++G GV+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A +VD+++   DL
Sbjct: 157 VVARVAGEGVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAQDVDIQINPNDL 216

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDT R+ GSGGQH NTT+SAVR+ HIPTG+ I +  E+SQH N+  A++VL  +L+++E
Sbjct: 217 RIDTMRASGSGGQHVNTTDSAVRILHIPTGL-IVVSAEKSQHRNREIAMQVLKTRLFDLE 275

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R RI   RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +++  +M G +LD  I
Sbjct: 276 RQRIDGERSADRKAQVGSGDRSERIRTYNFPQGRLTDHRINLTLYSLGQVMAG-DLDTII 334

Query: 298 DALLLQQEMDAIASFGS 314
           DAL  + +   +A  G+
Sbjct: 335 DALQSEAQAALLAEMGA 351


>gi|337754685|ref|YP_004647196.1| peptide chain release factor 1 [Francisella sp. TX077308]
 gi|336446290|gb|AEI35596.1| Peptide chain release factor 1 [Francisella sp. TX077308]
          Length = 361

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/298 (49%), Positives = 215/298 (72%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL  A +  +RL+  L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KEAAYEMLNEKDAELVEMAKEELKSANEAIERLEDELQILLLPRDPNDDANIFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EV+  +E +  GYKE  + I+G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVISASEGEHGGYKEIISKINGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDISPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLILEHQADLLATM 358


>gi|384899588|ref|YP_005774968.1| peptide chain release factor 1 [Helicobacter pylori F30]
 gi|317179532|dbj|BAJ57320.1| peptide chain release factor 1 [Helicobacter pylori F30]
          Length = 352

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 144/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL L   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY KLKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSKLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|219684506|ref|ZP_03539449.1| peptide chain release factor 1 [Borrelia garinii PBr]
 gi|219671868|gb|EED28922.1| peptide chain release factor 1 [Borrelia garinii PBr]
          Length = 357

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 141/283 (49%), Positives = 205/283 (72%), Gaps = 1/283 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +EL     + + L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQELIDLDKKREDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS++K WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHLPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L ++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDQLLDPLTIE 346


>gi|83953606|ref|ZP_00962327.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
 gi|83841551|gb|EAP80720.1| peptide chain release factor 1 [Sulfitobacter sp. NAS-14.1]
          Length = 351

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 154/316 (48%), Positives = 225/316 (71%), Gaps = 10/316 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKS-------LL 57
           ++LR   ++ID  + L+ +  + + ML   TE   LA +E  RL++ L ++       LL
Sbjct: 38  ADLRPVVEQIDAYRQLLQDMDDARAMLK-DTEMAELAEEELPRLKAALPQAEADLQLALL 96

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           P+D+AD++  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GWKFE++    ++L G KE
Sbjct: 97  PRDEADKKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEARGWKFELIEQQFTELGGVKE 156

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A I G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +   DL
Sbjct: 157 VVAHIKGENVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIDANDL 216

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY+ME
Sbjct: 217 RIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKARLYDME 275

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R R+   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  +
Sbjct: 276 RQRVDSERSASRAAQVGSGDRSERIRTYNFPQGRLTDHRINLTLYRLEAVMQG-DLDEIV 334

Query: 298 DALLLQQEMDAIASFG 313
           DAL    +   +A  G
Sbjct: 335 DALTADAQAQLLAEMG 350


>gi|414154192|ref|ZP_11410512.1| Peptide chain release factor 1 [Desulfotomaculum hydrothermale Lam5
           = DSM 18033]
 gi|411454377|emb|CCO08416.1| Peptide chain release factor 1 [Desulfotomaculum hydrothermale Lam5
           = DSM 18033]
          Length = 355

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 149/275 (54%), Positives = 202/275 (73%), Gaps = 6/275 (2%)

Query: 28  KDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           ++M+++  EEL   I+E E++L+ LLL    PKD  DE++ I+E+R GTGGEEA+LFA D
Sbjct: 74  REMVELEIEELESKIEELEQKLKILLL----PKDPNDEKNVIMEIRGGTGGEEAALFAGD 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++KKGW+ EV+   E+DL G+KE +  I G G Y  LKFESG+HRVQRVP T
Sbjct: 130 LFRMYCRYAEKKGWRTEVIDANETDLGGFKEVTFVIEGKGAYSTLKFESGVHRVQRVPAT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+A+EVD+ +   DLRID + + G GGQ  NTT SAVR+TH+PT
Sbjct: 190 ESGGRIHTSAATVAVLPEAEEVDIEINPNDLRIDLFCASGPGGQCVNTTQSAVRITHLPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G  +S QDE+SQH NK KA++VL A+L +  +     + +  R   +GSGDRSERIRTYN
Sbjct: 250 GTVVSCQDEKSQHKNKEKAMRVLRARLLDKAQEEQQKAIAGARKSMVGSGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           FPQ RVTDHR+G+T H +  +++GE LD  I+AL+
Sbjct: 310 FPQNRVTDHRIGLTLHRLESVLQGE-LDELIEALI 343


>gi|238756935|ref|ZP_04618123.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
 gi|238704765|gb|EEP97294.1| Peptide chain release factor 1 [Yersinia aldovae ATCC 35236]
          Length = 360

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 157/312 (50%), Positives = 218/312 (69%), Gaps = 6/312 (1%)

Query: 2   HLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
           H   E R+ Q +ID  + ++    ED +M +MA EEL  A    + L+  L   LLPKD 
Sbjct: 50  HCFKEWRSMQDDIDAAEMML----EDPEMREMAQEELKEAKARSEELEQQLQVLLLPKDP 105

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            DERDC LE+RAGTGG+EA++FA D+F+MY RY++ + WK E++  ++ +  GYKE  A 
Sbjct: 106 DDERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASDGEHGGYKEVIAK 165

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRID 180
           +SG GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E ++   N  DLRID
Sbjct: 166 VSGDGVYGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRID 225

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T+RS G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH NKAKA+ VL A++   E  +
Sbjct: 226 TFRSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQK 285

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
             L+ +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I  +
Sbjct: 286 RQLAVASERRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIQPI 344

Query: 301 LLQQEMDAIASF 312
           + + + D +++ 
Sbjct: 345 VQEYQADQLSAL 356


>gi|332558342|ref|ZP_08412664.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
 gi|332276054|gb|EGJ21369.1| peptide chain release factor 1 [Rhodobacter sphaeroides WS8N]
          Length = 351

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 156/304 (51%), Positives = 217/304 (71%), Gaps = 12/304 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL--------QSLLLKSL 56
           +EL+    EI   ++ + + +E + ML    E   LA DE   L        Q+L L +L
Sbjct: 38  AELKPVVAEISAYRTALEDLAEAEAMLS-DPEMRALAEDEIPALRARIPGMEQALRL-AL 95

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD AD R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW+FE++ +  S+L G +
Sbjct: 96  LPKDAADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIR 155

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EA+A I G G + +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   D
Sbjct: 156 EATARIEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAAD 215

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY++
Sbjct: 216 IRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHRNREIAMQVLRARLYDL 274

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER R+  +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M G +L   
Sbjct: 275 ERQRLADARSADRKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQIMAG-DLSEV 333

Query: 297 IDAL 300
           I AL
Sbjct: 334 ISAL 337


>gi|215486443|ref|YP_002328874.1| peptide chain release factor 1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312966451|ref|ZP_07780673.1| peptide chain release factor 1 [Escherichia coli 2362-75]
 gi|417755208|ref|ZP_12403297.1| peptide chain release factor 1 [Escherichia coli DEC2B]
 gi|418996325|ref|ZP_13543930.1| peptide chain release factor 1 [Escherichia coli DEC1A]
 gi|419001558|ref|ZP_13549104.1| peptide chain release factor 1 [Escherichia coli DEC1B]
 gi|419007039|ref|ZP_13554489.1| peptide chain release factor 1 [Escherichia coli DEC1C]
 gi|419012997|ref|ZP_13560357.1| peptide chain release factor 1 [Escherichia coli DEC1D]
 gi|419028294|ref|ZP_13575482.1| peptide chain release factor 1 [Escherichia coli DEC2C]
 gi|419034149|ref|ZP_13581243.1| peptide chain release factor 1 [Escherichia coli DEC2D]
 gi|419039095|ref|ZP_13586145.1| peptide chain release factor 1 [Escherichia coli DEC2E]
 gi|425299750|ref|ZP_18689741.1| peptide chain release factor 1 [Escherichia coli 07798]
 gi|254790880|sp|B7UQ99.1|RF1_ECO27 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|215264515|emb|CAS08882.1| peptide chain release factor RF-1 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312288904|gb|EFR16802.1| peptide chain release factor 1 [Escherichia coli 2362-75]
 gi|377846926|gb|EHU11931.1| peptide chain release factor 1 [Escherichia coli DEC1A]
 gi|377848662|gb|EHU13643.1| peptide chain release factor 1 [Escherichia coli DEC1C]
 gi|377851813|gb|EHU16749.1| peptide chain release factor 1 [Escherichia coli DEC1B]
 gi|377860629|gb|EHU25453.1| peptide chain release factor 1 [Escherichia coli DEC1D]
 gi|377877161|gb|EHU41758.1| peptide chain release factor 1 [Escherichia coli DEC2B]
 gi|377882394|gb|EHU46939.1| peptide chain release factor 1 [Escherichia coli DEC2D]
 gi|377883158|gb|EHU47687.1| peptide chain release factor 1 [Escherichia coli DEC2C]
 gi|377896571|gb|EHU60966.1| peptide chain release factor 1 [Escherichia coli DEC2E]
 gi|408219356|gb|EKI43506.1| peptide chain release factor 1 [Escherichia coli 07798]
          Length = 360

 Score =  310 bits (794), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +EL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQDELREAKEKSEQLEQQLHVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++  +E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  + ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIIQEHQADQLAAL 356


>gi|359782584|ref|ZP_09285804.1| peptide chain release factor 1 [Pseudomonas psychrotolerans L19]
 gi|359369404|gb|EHK69975.1| peptide chain release factor 1 [Pseudomonas psychrotolerans L19]
          Length = 360

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 150/311 (48%), Positives = 216/311 (69%), Gaps = 4/311 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            +E R  Q +++G ++L+ +   D D+ +MA EE+  A    + L+  L + +LP+D  D
Sbjct: 52  FTEYRKVQADLEGAQALLKDS--DPDLREMAEEEVGTAKARLQELEDELQRMMLPRDPND 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
            R+  LE+RAGTGG+EA++FA D+F+MY RY++++GW+ EV+   E +  G+KE  A + 
Sbjct: 110 GRNVFLEIRAGTGGDEAAIFAGDLFRMYSRYAERQGWRLEVLSENEGEHGGFKEVIARVE 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTY 182
           G  VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTY
Sbjct: 170 GDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDTY 229

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH N T+SAVR+TH+PTG+ +  Q+ERSQH N+AKA+  L AKL + + +  H
Sbjct: 230 RSSGAGGQHVNKTDSAVRITHLPTGIVVECQEERSQHKNRAKAMAWLSAKLNDQQDAAAH 289

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              S  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T +++ +++ G ++   ID LL 
Sbjct: 290 KEMSDTRRLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVVNG-DVQQVIDPLLQ 348

Query: 303 QQEMDAIASFG 313
           + + D +A+ G
Sbjct: 349 EYQADQLAALG 359


>gi|385229393|ref|YP_005789309.1| peptide chain release factor 1 [Helicobacter pylori Puno135]
 gi|344335831|gb|AEN17792.1| peptide chain release factor 1 [Helicobacter pylori Puno135]
          Length = 352

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 208/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+VG +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVGSSENSVGGYKEIIALIKGRGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|444380487|ref|ZP_21179617.1| Peptide chain release factor 1 [Enterovibrio sp. AK16]
 gi|443675443|gb|ELT82175.1| Peptide chain release factor 1 [Enterovibrio sp. AK16]
          Length = 362

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 204/289 (70%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL   L   LLPKD  DER+C LE+RAG GG+EA++FA 
Sbjct: 72  DDPEMREMAQEEVKAAKAEIERLSDELQVLLLPKDPNDERNCFLEIRAGAGGDEAAIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+ Y R+++KKGW+ EVV     +  GYKE  A +SG G YG +KFESG HRVQRVP 
Sbjct: 132 DLFRSYSRFAEKKGWRVEVVNANHGEHGGYKEMIAKVSGEGAYGVMKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAILP+  E ++  +   DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A+L + E  +    ++  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + + ++MEG +LD  I  ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLDEVMEG-DLDSLIQPIIQEFQADQLAALA 359


>gi|330502033|ref|YP_004378902.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
 gi|328916319|gb|AEB57150.1| peptide chain release factor 1 [Pseudomonas mendocina NK-01]
          Length = 360

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 152/309 (49%), Positives = 217/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           ELR  Q +++G ++L+ +   D D+ +MA  E+  A +    L+  L + LLPKD  D R
Sbjct: 54  ELRKVQGDLEGAQALLKDS--DPDLREMAELEVDQAKEALVGLEDKLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++K+GW+ EV+   E +  G+KE  A + G 
Sbjct: 112 NVYLEIRAGTGGDEAAIFSGDLFRMYSRYAEKQGWRVEVLSANEGEHGGFKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTYRS
Sbjct: 172 NVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+THIPTG  +  Q+ERSQH N+AKA+  L AKL + + +  H  
Sbjct: 232 SGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKAMAWLAAKLQDQQDAAAHKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S+ R   +GSGDRSERIRTYNFPQGRVTDHR+ +T +++++++ G  ++  I+ LL + 
Sbjct: 292 ISETRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLNEVIAG-GVEAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|260767753|ref|ZP_05876688.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|375130242|ref|YP_004992342.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
 gi|260617262|gb|EEX42446.1| peptide chain release factor 1 [Vibrio furnissii CIP 102972]
 gi|315179416|gb|ADT86330.1| peptide chain release factor 1 [Vibrio furnissii NCTC 11218]
          Length = 362

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 149/313 (47%), Positives = 217/313 (69%), Gaps = 4/313 (1%)

Query: 2   HLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
           H     +  Q ++   + +  E  +D +M +MA +E+ +A  E +RL   L   LLPKD 
Sbjct: 50  HCFQAYQQAQDDLSAAEEMAKE--DDAEMREMAQDEIKVAKAEIERLSDELQILLLPKDP 107

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            D+R+C LE+RAG GG+EA +FA D+F+MY R+++K+GW+ EV+   E++  GYKE  A 
Sbjct: 108 NDDRNCFLEIRAGAGGDEAGIFAGDLFRMYSRFAEKRGWRIEVMSSNEAEHGGYKEMIAK 167

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRID 180
           +SG G YG LKFESG HRVQRVP TE  GRVHTSA +VA++ +  E ++  +R  DL+ID
Sbjct: 168 VSGDGAYGVLKFESGGHRVQRVPATESQGRVHTSACTVAVMAEVPEAEIPEIRTADLKID 227

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T+RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKA+ VL A++ + E  +
Sbjct: 228 TFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLAARIAKAEEEK 287

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
              + S  R   +GSGDRS+RIRTYN+PQGRV+DHR+ +T + +S++MEG +L   +D +
Sbjct: 288 RAAAISDTRRNLLGSGDRSDRIRTYNYPQGRVSDHRINLTVYRLSEVMEG-DLQSLVDPV 346

Query: 301 LLQQEMDAIASFG 313
           + + + D +A+  
Sbjct: 347 IQEHQADQLAALA 359


>gi|254511294|ref|ZP_05123361.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
 gi|221535005|gb|EEE37993.1| peptide chain release factor 1 [Rhodobacteraceae bacterium KLH11]
          Length = 357

 Score =  310 bits (794), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 149/302 (49%), Positives = 216/302 (71%), Gaps = 8/302 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+L+    +I G + L+ + +E      D DM ++A EE+          +  L  +LLP
Sbjct: 44  SDLKPVVDQILGWRQLVADLAEAEAMLSDPDMKELAEEEIPQLQARIPEAEHALQLALLP 103

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GW+FE++    SDL G KE 
Sbjct: 104 RDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEGRGWQFEIIEEQASDLGGIKEV 163

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I G  V+ ++K+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+++   D+R
Sbjct: 164 VAHIKGDNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQIDANDIR 223

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 224 IDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLER 282

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI  +RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  ID
Sbjct: 283 QRIDSARSADRASQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDQVMQG-DLDEVID 341

Query: 299 AL 300
           AL
Sbjct: 342 AL 343


>gi|388259168|ref|ZP_10136342.1| peptide chain release factor 1 [Cellvibrio sp. BR]
 gi|387937126|gb|EIK43683.1| peptide chain release factor 1 [Cellvibrio sp. BR]
          Length = 360

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 150/290 (51%), Positives = 207/290 (71%), Gaps = 6/290 (2%)

Query: 27  DKDMLDMATEEL--CLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           D DM +MA EEL  C A  E  +L+  L K LLPKD  DE++C LE+RAGTGG+EA++F+
Sbjct: 73  DDDMKEMAEEELKDCEAQLEPMQLE--LQKLLLPKDPNDEKNCYLEIRAGTGGDEAAIFS 130

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ +GW+ EV+   E +  G+KE    +SG GVY KLKFESG HRVQRVP
Sbjct: 131 GDLFRMYSRYAETQGWRVEVLSQNEGEHGGFKEIITLVSGQGVYSKLKFESGAHRVQRVP 190

Query: 145 LTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+ADE+ ++ +   DLRIDT+R+ G+GGQH N T+SA+R+ H
Sbjct: 191 ETESQGRIHTSACTVAVMPEADEMEEININKADLRIDTFRASGAGGQHVNKTDSAIRIVH 250

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           +PTG+ I  QDERSQH N+A+A+ +L  KL  M+    H S S  R   +GSGDRSERIR
Sbjct: 251 LPTGLVIECQDERSQHKNRARAMSLLATKLKTMQEDAAHKSLSDERRNLVGSGDRSERIR 310

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           TYN+PQGRVTDHR+ +T +++  +M+G +LD  +  L  + + D +A+  
Sbjct: 311 TYNYPQGRVTDHRINLTLYSLDAIMQG-DLDPVVGPLANEYQADQLAAIA 359


>gi|239637411|ref|ZP_04678393.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
 gi|239597011|gb|EEQ79526.1| peptide chain release factor 1 [Staphylococcus warneri L37603]
          Length = 358

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 217/307 (70%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E+  ++ ++ E S DK+ ++M  EE     +E   ++  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELADIEEMLNETS-DKEEIEMLKEESSSLKNELPEMEEQLKLLLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++   +K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEAHNFKTEIVEASESDHGGYKEISFSVSGNGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   +S ++EG NLD  IDAL L ++ D
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLSQILEG-NLDEIIDALTLSEQTD 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|254876395|ref|ZP_05249105.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842416|gb|EET20830.1| peptide chain release factor [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 361

 Score =  310 bits (793), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 214/298 (71%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL  A +  +RL+  L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KEAAYEMLNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EVV  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLILEHQADLLATM 358


>gi|400754733|ref|YP_006563101.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
 gi|398653886|gb|AFO87856.1| peptide chain release factor 1 [Phaeobacter gallaeciensis 2.10]
          Length = 351

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 151/315 (47%), Positives = 218/315 (69%), Gaps = 8/315 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+LR   ++I   + L+ +  E      D DM ++A EEL          +  L  +LLP
Sbjct: 38  SDLRPVAEQISAYRRLLSDLEEAEQMLADPDMAELAEEELPQLRAALPEAEHALQLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D+AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GW  E++    ++L G KE 
Sbjct: 98  RDEADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWGIEIIEEQTTELGGLKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A + G  V+ +LK+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A++VD+R+   DLR
Sbjct: 158 VAHVKGENVFARLKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEDVDLRIDPGDLR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+THIPTG+ I +  E+SQH N+  A++V+  +LY++ER
Sbjct: 218 IDTMRASGAGGQHVNTTDSAVRITHIPTGI-IVVSSEKSQHRNREIAMQVMRTRLYDLER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M+G +LD  ID
Sbjct: 277 QRIDSERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLDQIMQG-DLDEIID 335

Query: 299 ALLLQQEMDAIASFG 313
           AL    +   +A  G
Sbjct: 336 ALTADDQARLLAEMG 350


>gi|83591213|ref|YP_431222.1| peptide chain release factor 1 [Moorella thermoacetica ATCC 39073]
 gi|119361560|sp|Q2RFW0.1|RF1_MOOTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83574127|gb|ABC20679.1| bacterial peptide chain release factor 1 (bRF-1) [Moorella
           thermoacetica ATCC 39073]
          Length = 356

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 154/288 (53%), Positives = 206/288 (71%), Gaps = 10/288 (3%)

Query: 23  ECSEDKDML----DMATEELCLA-----IDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           E +EDK ML    D   +EL  A       E++RL+  L   LLPKD  DE+D I+E+RA
Sbjct: 57  ELAEDKAMLEEEKDREFQELLKAEIERLTGEQERLEQELKILLLPKDPNDEKDIIMEIRA 116

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           G GGEEA+LFA D+F+MY+RY++KK W+ E++    ++L G+KE    + G GVY +LKF
Sbjct: 117 GAGGEEAALFAGDLFRMYQRYAEKKRWRTEIISSHPTELGGFKEIIFQVEGQGVYSRLKF 176

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 193
           ESG+HRVQR+P TE  GR+HTS  +VA+LP+A+EVDV ++ EDLR+D + S G GGQ  N
Sbjct: 177 ESGVHRVQRIPTTESGGRIHTSTATVAVLPEAEEVDVEIKPEDLRVDIFCSSGPGGQSVN 236

Query: 194 TTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQI 253
           TT SAVR+TH+PTG+ +S QDE+SQ  NK KA++VL A+L +M R+      ++ R  Q+
Sbjct: 237 TTYSAVRITHLPTGLVVSCQDEKSQLKNKEKAMRVLRARLLDMARAEREGELAEERRSQV 296

Query: 254 GSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           GSGDRSERIRTYNFPQ RVTDHR+G+T H +  ++ GE LD  IDAL+
Sbjct: 297 GSGDRSERIRTYNFPQNRVTDHRIGLTLHHLDQVLAGE-LDEIIDALV 343


>gi|330445230|ref|ZP_08308882.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489421|dbj|GAA03379.1| peptide chain release factor 1 [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 362

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL   L   LLPKD  D+R+C +E+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKEAKAEIERLADELQVLLLPKDPNDDRNCFVEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++++GW+ EV+    ++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAERRGWRVEVISENRAEQGGYKEMIAKVNGDGAYGILKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA+LP+  E ++  +   DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVLPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + H   +  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +LD  I  +L + + D +A+  
Sbjct: 312 YNYPQGRVSDHRITLTLYRLNEVMEG-DLDALIQPVLQEHQADQLAAMA 359


>gi|289523200|ref|ZP_06440054.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503743|gb|EFD24907.1| peptide chain release factor 1 [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 358

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 157/309 (50%), Positives = 219/309 (70%), Gaps = 3/309 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  QK ++   +L  E  +D+D+ ++A EE     +  + L+  L   LLPKD  DER
Sbjct: 53  EYRQAQKRLEEALALTEE--DDEDLRELAREEANQLKNIVEELEEELALLLLPKDPNDER 110

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
             I+E+RAG GGEEA+LFA D+++MY RY+++K WK E++   E+ + GYKE    + G 
Sbjct: 111 SVIVEIRAGAGGEEAALFAADLYRMYVRYAERKRWKVELLTANETGIGGYKEIVFRVEGQ 170

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
             Y  LK+ESG+HRVQRVP+TE SGR+HTS  +VA+LP+ DEVDV +R EDL+IDT+R+ 
Sbjct: 171 DAYSVLKYESGVHRVQRVPVTEASGRIHTSTATVAVLPEPDEVDVEIRPEDLKIDTFRAS 230

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQ+ N T+SAVR+THIPTG+ ++ QDERSQ  N+AKA+++L AKLY+ME  R   + 
Sbjct: 231 GAGGQYVNMTDSAVRITHIPTGIVVTCQDERSQLKNRAKAMQLLRAKLYDMEIRRQQEAM 290

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +  R  QIGSGDRSERIRTYNFPQ RVTDHR+G+T H + +++EG +LD  + AL    +
Sbjct: 291 ASERRGQIGSGDRSERIRTYNFPQNRVTDHRIGLTLHNLDEILEG-DLDELLYALATADQ 349

Query: 306 MDAIASFGS 314
           M+ +   G+
Sbjct: 350 MEKLKLLGA 358


>gi|332285704|ref|YP_004417615.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
 gi|330429657|gb|AEC20991.1| peptide chain release factor 1 [Pusillimonas sp. T7-7]
          Length = 355

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 149/292 (51%), Positives = 209/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM  MA EEL L  ++ ++L++ L   LLP+D  D R   LE+RAGTGG+E++L
Sbjct: 63  EMMADPDMRGMAEEELMLGKEKLEQLEADLQVLLLPRDPDDSRSVYLEIRAGTGGDESAL 122

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++   W+ E+V  ++S++ GYKE  A + G GVYG+LKFESG HRVQR
Sbjct: 123 FAGDLLRMYTRYAENNSWRVELVSASDSEIGGYKEVIARVDGDGVYGRLKFESGAHRVQR 182

Query: 143 VPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA+LP+ADE  D+ +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 183 VPATETQGRIHTSACTVAVLPEADEQSDIVINPADLRIDTFRASGAGGQHINKTDSAVRV 242

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK KAL+VL A+L + ++   H   +  R   +G+GDRSER
Sbjct: 243 THLPTGLVVECQDDRSQHRNKDKALQVLAARLKDKQQQEQHDKEAAQRKSLVGTGDRSER 302

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T + +  +M+G +L+   +ALL + + + +A+ G
Sbjct: 303 IRTYNYPQGRVTDHRINLTLYKLGHIMDG-DLNELTNALLAEHQAEQLAALG 353


>gi|70732476|ref|YP_262238.1| peptide chain release factor 1 [Pseudomonas protegens Pf-5]
 gi|119361580|sp|Q4K695.1|RF1_PSEF5 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68346775|gb|AAY94381.1| peptide chain release factor 1 [Pseudomonas protegens Pf-5]
          Length = 360

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 148/304 (48%), Positives = 217/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D D+ +MA EE+  A ++   L+S L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKD--NDPDLREMAAEEVREAKEQLAELESSLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRLEILSENEGEHGGYKEVIARVEGESVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLRIDTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+THIP+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHIPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHR+ +T +++ +++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLDEILAG-GVEAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|114768932|ref|ZP_01446558.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2255]
 gi|114549849|gb|EAU52730.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2255]
          Length = 351

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 153/302 (50%), Positives = 222/302 (73%), Gaps = 8/302 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDML------DMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+L+    +I+  K+ + + SE ++ML       +A EEL    ++   L+  LL SLLP
Sbjct: 38  SDLKPVVDQIENYKATLLDISEAEEMLLDPELKVLAEEELPNLKEKLPILEHKLLLSLLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD+AD++  I+E+RAGTGG+EA+LFA D+ +MY R+ + +GWKFE+V   E++L GYKEA
Sbjct: 98  KDEADDKPAIIEIRAGTGGDEAALFAGDLLRMYNRFCEDQGWKFEIVEGNETELGGYKEA 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
              + GVGV+ +LK+ESG+HRVQRVP TE  GRVHTSA +VAI+P+A+ +D+ +   D+R
Sbjct: 158 IINVKGVGVFARLKYESGVHRVQRVPTTESGGRVHTSAATVAIMPEAENIDLEIPTTDIR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           +DTYRS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A+ VL  +LY+++R
Sbjct: 218 LDTYRSSGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHRNREIAMNVLRTRLYDLQR 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            +    R+  R +Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + +  +M+G +L+ FID
Sbjct: 277 QQAADERAATRKDQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKLDQVMQG-DLNEFID 335

Query: 299 AL 300
           AL
Sbjct: 336 AL 337


>gi|221639323|ref|YP_002525585.1| peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
 gi|254790895|sp|B9KST8.1|RF1_RHOSK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|221160104|gb|ACM01084.1| Peptide chain release factor 1 [Rhodobacter sphaeroides KD131]
          Length = 351

 Score =  310 bits (793), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 156/304 (51%), Positives = 217/304 (71%), Gaps = 12/304 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL--------QSLLLKSL 56
           +EL+    EI   ++ + + +E + ML    E   LA DE   L        Q+L L +L
Sbjct: 38  AELKPVVVEISAYRTALEDLAEAEAMLS-DPEMRALAEDEIPALRARIPGMEQALRL-AL 95

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD AD R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW+FE++ +  S+L G +
Sbjct: 96  LPKDAADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIR 155

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EA+A + G G + +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   D
Sbjct: 156 EATARVEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAAD 215

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           LRIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY++
Sbjct: 216 LRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHRNREIAMQVLRARLYDL 274

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER R+  +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M G +L   
Sbjct: 275 ERQRLADARSADRKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQIMAG-DLSEV 333

Query: 297 IDAL 300
           I AL
Sbjct: 334 ISAL 337


>gi|386853602|ref|YP_006202887.1| peptide chain release factor 1 [Borrelia garinii BgVir]
 gi|365193636|gb|AEW68534.1| PrfA [Borrelia garinii BgVir]
          Length = 349

 Score =  310 bits (793), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 140/283 (49%), Positives = 206/283 (72%), Gaps = 1/283 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +E+     +++ L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 57  ILEKEDQQEMKELIKQEIIDLDKKKEDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 116

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS++K WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 117 ALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRV 176

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 177 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 236

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 237 ITHMPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 296

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L ++
Sbjct: 297 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLTIE 338


>gi|300313560|ref|YP_003777652.1| peptide chain release factor 1 [Herbaspirillum seropedicae SmR1]
 gi|300076345|gb|ADJ65744.1| peptide chain release factor 1 (RF-1) protein [Herbaspirillum
           seropedicae SmR1]
          Length = 359

 Score =  310 bits (793), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 209/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM   A EE+  A    + L+  L K LLPKD  DER+  LE+RAGTGG+E++L
Sbjct: 67  ELLADPDMKAFAQEEIDGAKARMEGLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E+V  +ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYTRYAERQRWQVEIVSASESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADEV DV +   D+RIDTYR+ G+GGQH N T+SAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEVGDVEINPADIRIDTYRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NKA+A+KVL A++ +++  +     +  R   IGSGDRSER
Sbjct: 247 THLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLRQQQSEEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD   +AL+ + + + +A  G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLDFIMDG-DLDELTNALITEHQAELLAQLG 357


>gi|350571878|ref|ZP_08940194.1| peptide chain release factor RF1 [Neisseria wadsworthii 9715]
 gi|349791063|gb|EGZ44956.1| peptide chain release factor RF1 [Neisseria wadsworthii 9715]
          Length = 358

 Score =  310 bits (793), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 155/292 (53%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM D A EE+  A  + + L   L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPDMKDFAAEEIEAAKTKIETLDLALQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ESDL GYKE  A I G+G Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYTRYAERNNWQVEIVSANESDLGGYKEVIARIIGLGAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ ++ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEEIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L +M++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDMQKREAQAKEAAERKTLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRV+DHR+ +T H +  +M+G +LD    AL+ + + + +AS G
Sbjct: 307 IRTYNYPQGRVSDHRINLTLHKLDFIMDG-DLDELTGALIAEHQAELLASMG 357


>gi|167627296|ref|YP_001677796.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189039973|sp|B0TX37.1|RF1_FRAP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167597297|gb|ABZ87295.1| peptide chain release factor 1 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 361

 Score =  310 bits (793), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 149/298 (50%), Positives = 214/298 (71%), Gaps = 4/298 (1%)

Query: 18  KSLIYECSEDKD--MLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGT 75
           K   YE   +KD  +++MA EEL  A +  +RL+  L   LLP+D  D+ +  LE+RAGT
Sbjct: 62  KEAAYEMLNEKDAELVEMAKEELKSANESIERLEDELQILLLPRDPNDDANIFLEIRAGT 121

Query: 76  GGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFES 135
           GG+EAS+F+ D+FKMY +Y++++GWK EVV  +E +  GYKE  + I G GVY +LKFES
Sbjct: 122 GGDEASIFSGDLFKMYSKYAEQRGWKIEVVSASEGEHGGYKEIISRIYGDGVYSQLKFES 181

Query: 136 GIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANT 194
           G HRVQRVP TE  GR+HTSA +VA++P+ADEV+ + +   D+++DT+R+ G+GGQH N 
Sbjct: 182 GAHRVQRVPATESQGRIHTSACTVAVMPEADEVEGIDINPADIKVDTFRASGAGGQHVNK 241

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+THIPTG+ +  QD+RSQH N+A A+ +L +KL + E  +    +S  R   +G
Sbjct: 242 TDSAIRITHIPTGVVVECQDQRSQHKNRAAAMSMLKSKLLQAEIDKQQKEQSDTRKNLVG 301

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           SGDRSERIRTYN+PQGRVTDHR+ +T + + ++MEG +LD  I  L+L+ + D +A+ 
Sbjct: 302 SGDRSERIRTYNYPQGRVTDHRINLTLYKLDEVMEG-SLDSIIQPLILEHQADLLATM 358


>gi|347758186|ref|YP_004865748.1| peptide chain release factor 1 [Micavibrio aeruginosavorus ARL-13]
 gi|347590704|gb|AEP09746.1| peptide chain release factor 1 [Micavibrio aeruginosavorus ARL-13]
          Length = 353

 Score =  309 bits (792), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 151/286 (52%), Positives = 210/286 (73%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           DKDM +MA EEL    D    L+  +  +L+PKD+AD R+ ILE+RAGTGG+EA+LFA D
Sbjct: 67  DKDMAEMAQEELYALKDRLPGLEEQVKLALIPKDEADSRNAILEIRAGTGGDEAALFAAD 126

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F MY  Y+  +GW+FEV  ++E+DL GYKE    + G  V+ +LK+ESG HRVQR+P+T
Sbjct: 127 LFAMYRGYAATRGWRFEVAEMSENDLGGYKEIIVEVQGSDVFSRLKYESGGHRVQRIPVT 186

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA++P+A++VD+ +  +DLRID YR+ G+GGQH N T SAVR+THIPT
Sbjct: 187 EAGGRIHTSAATVAVMPEAEDVDIHIDEKDLRIDVYRAQGAGGQHVNKTESAVRITHIPT 246

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G   + Q+ +SQH N+  A+K+L +KLYE +  +    RS  R  Q+GSGDRSERIRTYN
Sbjct: 247 GTVAACQEGKSQHKNRDTAMKMLRSKLYEAQWRKQAEERSANRKSQVGSGDRSERIRTYN 306

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           FPQGRVTDHR+ +T +A+ D++ G++LD FIDAL+ ++  + +A  
Sbjct: 307 FPQGRVTDHRINMTLYALDDVLSGKDLDKFIDALISEENAEKLAEL 352


>gi|429206370|ref|ZP_19197636.1| Peptide chain release factor 1 [Rhodobacter sp. AKP1]
 gi|428190411|gb|EKX58957.1| Peptide chain release factor 1 [Rhodobacter sp. AKP1]
          Length = 351

 Score =  309 bits (792), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 155/304 (50%), Positives = 217/304 (71%), Gaps = 12/304 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL--------QSLLLKSL 56
           +EL+    EI   ++ + + +E + ML    E   LA DE   L        Q+L L +L
Sbjct: 38  AELKPVVAEISAYRTALEDLAEAEAMLS-DPEMRALAEDEIPALRARIPGMEQALRL-AL 95

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD AD R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW+FE++ +  S+L G +
Sbjct: 96  LPKDAADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIR 155

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EA+A + G G + +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   D
Sbjct: 156 EATARVEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAAD 215

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY++
Sbjct: 216 IRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHRNREIAMQVLRARLYDL 274

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER R+  +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M G +L   
Sbjct: 275 ERQRLADARSADRKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQIMAG-DLSEV 333

Query: 297 IDAL 300
           I AL
Sbjct: 334 ISAL 337


>gi|126462320|ref|YP_001043434.1| peptide chain release factor 1 [Rhodobacter sphaeroides ATCC 17029]
 gi|166223593|sp|A3PJZ6.1|RF1_RHOS1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|126103984|gb|ABN76662.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 351

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 155/304 (50%), Positives = 217/304 (71%), Gaps = 12/304 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL--------QSLLLKSL 56
           +EL+    EI   ++ + + +E + ML    E   LA DE   L        Q+L L +L
Sbjct: 38  AELKPVVAEISAYRTALEDLAEAEAMLS-DPEMRALAEDEIPALRARIPGMEQALRL-AL 95

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD AD R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW+FE++ +  S+L G +
Sbjct: 96  LPKDAADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIR 155

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EA+A + G G + +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   D
Sbjct: 156 EATARVEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAAD 215

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY++
Sbjct: 216 IRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHRNREIAMQVLRARLYDL 274

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER R+  +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M G +L   
Sbjct: 275 ERQRLADARSADRKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQIMAG-DLSEV 333

Query: 297 IDAL 300
           I AL
Sbjct: 334 ISAL 337


>gi|126739408|ref|ZP_01755101.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
 gi|126719508|gb|EBA16217.1| peptide chain release factor 1 [Roseobacter sp. SK209-2-6]
          Length = 351

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 150/302 (49%), Positives = 213/302 (70%), Gaps = 8/302 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           SE++   ++I   + L+ +  E      D DM ++A EE+          +  L  +LLP
Sbjct: 38  SEIKPVAEQICAYRQLLADLEEAEVMLADPDMKELAEEEIPTLKAALPDAEHALQLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  +LE+R GTGG+EASLFA D+ +MY+RY++ +GWKFEV+    ++L G KE 
Sbjct: 98  KDAADTRPAMLEIRPGTGGDEASLFAGDLLRMYQRYAEARGWKFEVIEEQATELGGIKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
              I G  V+ ++K+ESG+HRVQRVP+TE  GR+HTSA +VA+LP+A++VD+ +   DLR
Sbjct: 158 VVHIKGENVFARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEDVDIHIDANDLR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKTRLYDLER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR++DHR+ +T + +  +M+G +LD  ID
Sbjct: 277 QRIDSERSADRASQVGSGDRSERIRTYNFPQGRMSDHRINLTLYKLDQIMQG-DLDEIID 335

Query: 299 AL 300
           AL
Sbjct: 336 AL 337


>gi|206901386|ref|YP_002250520.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
 gi|226739102|sp|B5YDB2.1|RF1_DICT6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|206740489|gb|ACI19547.1| peptide chain release factor 1 [Dictyoglomus thermophilum H-6-12]
          Length = 367

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 142/254 (55%), Positives = 190/254 (74%), Gaps = 1/254 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD  DE++ I+E+RAGTGGEEA+LFA D+F+MY  Y+QKKGWK E+V    + L GY
Sbjct: 104 LLPKDPNDEKNIIMEIRAGTGGEEAALFAADLFRMYVGYAQKKGWKVEIVSSNPTGLGGY 163

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE    + G G Y +LKFESG+HRVQRVP+TE SGR+HTS  +VA+LP+ +EVDV +  +
Sbjct: 164 KEIIFIVEGKGAYSRLKFESGVHRVQRVPITESSGRIHTSTATVAVLPEMEEVDVEIDPK 223

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRI+T+RSGG+GGQH N T S VR+THIP+G+ +  QDERSQH N+ KA+KVL A+LYE
Sbjct: 224 DLRIETFRSGGAGGQHVNKTESGVRITHIPSGIVVQCQDERSQHQNREKAMKVLRARLYE 283

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
             +       +  R +Q+G+G+RSE+IRTYNFPQ RVTDHR+  +   + +++ GE LD 
Sbjct: 284 YYQREKENEIASQRRQQVGTGERSEKIRTYNFPQRRVTDHRINYSSFQLEEVLSGE-LDE 342

Query: 296 FIDALLLQQEMDAI 309
           FID L+L ++ + I
Sbjct: 343 FIDRLILAEKEEQI 356


>gi|148981991|ref|ZP_01816579.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
 gi|417949871|ref|ZP_12593001.1| peptide chain release factor 1 [Vibrio splendidus ATCC 33789]
 gi|145960679|gb|EDK26023.1| peptide chain release factor 1 [Vibrionales bacterium SWAT-3]
 gi|342807595|gb|EGU42781.1| peptide chain release factor 1 [Vibrio splendidus ATCC 33789]
          Length = 362

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 209/291 (71%), Gaps = 2/291 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  DER+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDERNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F+MY ++++KKGW+ EV+   +S+  GYKE  A +SG GVYG +KFESG HRVQRVP 
Sbjct: 132 NLFRMYSKFAEKKGWRVEVMSSNDSEQGGYKEMIAKVSGEGVYGVMKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++P+  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMPEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           YN+PQGRV+DHR+ +T + +++++EG ++   ID +L + + D +A+    
Sbjct: 312 YNYPQGRVSDHRINLTLYRLNEVLEG-DMQSLIDPVLQEHQADQLAALAEN 361


>gi|145218953|ref|YP_001129662.1| peptide chain release factor 1 [Chlorobium phaeovibrioides DSM 265]
 gi|189039984|sp|A4SCF1.1|RF1_PROVI RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145205117|gb|ABP36160.1| bacterial peptide chain release factor 1 (bRF-1) [Chlorobium
           phaeovibrioides DSM 265]
          Length = 357

 Score =  309 bits (792), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 139/246 (56%), Positives = 192/246 (78%), Gaps = 2/246 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG- 114
           LLPKD+AD R+ ILE+RAGTGGEEA+LF  D+F+MY+RY++K+GW F+++   ES + G 
Sbjct: 99  LLPKDEADSRNVILEIRAGTGGEEAALFTTDLFRMYQRYAEKQGWNFQMLDYNESSVPGG 158

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
           ++EA+ +I+G  V+G +K+ESG+HRVQRVP TE  GR+HTSA SVA+LP+A+EVDV +R 
Sbjct: 159 FREATISITGHDVFGTMKYESGVHRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRK 218

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           EDLR+DTYRSGG GGQ+ N   +AVR+TH+PTGM  + Q+ERSQ  NK +A+K+L AKL+
Sbjct: 219 EDLRLDTYRSGGKGGQNVNKVETAVRITHMPTGMVAACQEERSQLQNKERAMKMLRAKLF 278

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           +++ +    +R+ LR   + +GDRS +IRTYN+PQ RVTDHR+G T HA+   M+GE + 
Sbjct: 279 DIQLAEQQQARADLRRTMVATGDRSAKIRTYNYPQSRVTDHRIGFTTHALPQFMQGE-IG 337

Query: 295 IFIDAL 300
             IDAL
Sbjct: 338 ELIDAL 343


>gi|163783081|ref|ZP_02178076.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881761|gb|EDP75270.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 361

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 149/291 (51%), Positives = 208/291 (71%), Gaps = 9/291 (3%)

Query: 18  KSLIYECSEDKDMLDMATEELC-LAIDEEKRLQSLL-------LKSLLPKDDADERDCIL 69
           K L  E +E K++L    +EL  LA +E + +QS +          L+PKD  D ++ IL
Sbjct: 57  KRLQRELNEAKELLKSPEKELKELAQEEIEDIQSRIPELEEKLKLLLVPKDPNDSKNVIL 116

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           E+RAGTGGEEA+LF  D+ +MY++Y++ KGWKF ++   ++ L GYKE  A I G G Y 
Sbjct: 117 EIRAGTGGEEAALFVADLLRMYQKYAEDKGWKFSILNANKTGLGGYKEVIALIEGEGAYS 176

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGG 189
           +LK+ESG+HRVQR+P+TE  GR+HTS  +VA+LP+ADE DV +  +DL+I+T+R+ G+GG
Sbjct: 177 RLKYESGVHRVQRIPVTESGGRIHTSTATVAVLPEADEADVEINPQDLKIETFRASGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           Q+ NTT +AVR+TH PTG+ +S QDERSQ  NK KALK+L AKL +    +     ++ R
Sbjct: 237 QYVNTTETAVRITHTPTGIVVSCQDERSQFQNKQKALKILYAKLKDFYERKKREEIARER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            EQ+G+G+RSE+IRTYNFPQ RVTDHRV +T + ++D++EG  LD FIDAL
Sbjct: 297 KEQVGTGERSEKIRTYNFPQNRVTDHRVNLTLYKLNDVLEG-KLDEFIDAL 346


>gi|420403221|ref|ZP_14902407.1| peptide chain release factor 1 [Helicobacter pylori CPY6261]
 gi|393020387|gb|EJB21526.1| peptide chain release factor 1 [Helicobacter pylori CPY6261]
          Length = 352

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 208/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK+++++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELIELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V++ +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|443473457|ref|ZP_21063481.1| Peptide chain release factor 1 [Pseudomonas pseudoalcaligenes
           KF707]
 gi|442904194|gb|ELS29310.1| Peptide chain release factor 1 [Pseudomonas pseudoalcaligenes
           KF707]
          Length = 360

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 214/309 (69%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E R  Q +++G ++L+ +   D D+ +MA EE+  A      L+  L + LLPKD  D R
Sbjct: 54  EFRKVQGDLEGAQALLKDS--DPDLREMAEEEVDQARTRLVGLEDRLQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVEILSENEGEHGGYKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTYR+
Sbjct: 172 NVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SAVR+THIP+G+ +  Q+ERSQH N+AKA+  L AKL + + +  H  
Sbjct: 232 SGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQEAAAHKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S  R   +GSGDRSERIRTYN+PQGRVTDHR+ +T +A+ D+M G  ++  I+ LL + 
Sbjct: 292 MSDTRRLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYALDDVMAG-GVEAVIEPLLAEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|420500531|ref|ZP_14999077.1| peptide chain release factor 1 [Helicobacter pylori Hp P-30]
 gi|393152298|gb|EJC52599.1| peptide chain release factor 1 [Helicobacter pylori Hp P-30]
          Length = 352

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|429212753|ref|ZP_19203918.1| peptide chain release factor 1 [Pseudomonas sp. M1]
 gi|428157235|gb|EKX03783.1| peptide chain release factor 1 [Pseudomonas sp. M1]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 217/309 (70%), Gaps = 4/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           + R  Q +++G ++L+ +   D D+ +MA EE+  A      L+  L + LLPKD  D R
Sbjct: 54  DFRKTQADLEGAQALLKDS--DPDLREMAEEEVASAKACLAELEDALQRMLLPKDPNDGR 111

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ EV+   E +  GYKE  A + G 
Sbjct: 112 NVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERQGWRVEVLSENEGEHGGYKEVIARVEGD 171

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VY KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DTYRS
Sbjct: 172 NVYAKLKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQAAIEINPADLRVDTYRS 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SAVR+THIP+G+ +  Q+ERSQH N+AKA+  L AKL + +++    +
Sbjct: 232 SGAGGQHVNKTDSAVRITHIPSGIVVECQEERSQHKNRAKAMAWLAAKLNDQQQAAAQQA 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T +++ ++MEGE ++  I+ LL + 
Sbjct: 292 IASTRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLGEVMEGE-VEQVIEPLLQEY 350

Query: 305 EMDAIASFG 313
           + D +A+ G
Sbjct: 351 QADQLAALG 359


>gi|420416248|ref|ZP_14915359.1| peptide chain release factor 1 [Helicobacter pylori NQ4044]
 gi|393037694|gb|EJB38729.1| peptide chain release factor 1 [Helicobacter pylori NQ4044]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420395969|ref|ZP_14895193.1| peptide chain release factor 1 [Helicobacter pylori CPY1124]
 gi|420396807|ref|ZP_14896025.1| peptide chain release factor 1 [Helicobacter pylori CPY1313]
 gi|393012181|gb|EJB13364.1| peptide chain release factor 1 [Helicobacter pylori CPY1124]
 gi|393012469|gb|EJB13647.1| peptide chain release factor 1 [Helicobacter pylori CPY1313]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL L   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420212554|ref|ZP_14717903.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM001]
 gi|394279675|gb|EJE23978.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM001]
          Length = 358

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/307 (47%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           +TK++E+  ++ ++ E S DK+ ++M  EE      E   ++  L   L+PKD  D++D 
Sbjct: 52  KTKKEELQDIEDMLNETS-DKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ES+  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESNHGGYKEVSFSVSGTGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+A++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   ++ +MEG NLD  ++AL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEG-NLDEIVEALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|408670823|ref|YP_006870894.1| peptide chain release factor 1 [Borrelia garinii NMJW1]
 gi|407240645|gb|AFT83528.1| peptide chain release factor 1 [Borrelia garinii NMJW1]
          Length = 357

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 140/283 (49%), Positives = 205/283 (72%), Gaps = 1/283 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           I E  + ++M ++  +E+     + + L+  +   LLP+D+ D ++ I+E+RAGTGGEEA
Sbjct: 65  ILEKEDQQEMKELIKQEIIDLDKKREDLEHQIKILLLPQDENDSKNIIIEIRAGTGGEEA 124

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA +++ MY +YS++K WK E++   E++L G+KE    I G  V+ KLK+ESG+HRV
Sbjct: 125 ALFANNLYSMYIKYSERKKWKTEIINFNETELGGFKEIVFEIKGKDVFKKLKYESGVHRV 184

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QR+P+TE +GR+ TSA +VA+LP  +E ++ +  +DLRID YRS G+GGQH NTT+SAVR
Sbjct: 185 QRIPITESNGRLQTSAATVAVLPNIEETEIDINEKDLRIDVYRSSGAGGQHVNTTDSAVR 244

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  Q+ERSQH NK +A+K+L A+LYE E S+    RS  R +Q+GSGDRSE
Sbjct: 245 ITHMPTGIVVQCQNERSQHKNKDQAMKILRARLYEFEDSKKQEQRSSNRKQQVGSGDRSE 304

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           RIRTYNFPQ R+TDHR  IT + + + M+GE LD  +D L ++
Sbjct: 305 RIRTYNFPQNRITDHRANITLYKLEEFMQGE-LDPLLDPLTIE 346


>gi|419956812|ref|ZP_14472878.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           GS1]
 gi|388606970|gb|EIM36174.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           GS1]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|269138757|ref|YP_003295458.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|387867437|ref|YP_005698906.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
 gi|267984418|gb|ACY84247.1| peptide chain release factor 1 [Edwardsiella tarda EIB202]
 gi|304558750|gb|ADM41414.1| Peptide chain release factor 1 [Edwardsiella tarda FL6-60]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/293 (51%), Positives = 209/293 (71%), Gaps = 10/293 (3%)

Query: 26  EDKDMLDMATEELCLA----IDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEAS 81
           +D +M +MA EE+  A     D E+ LQ LLL    PKD  DERDC LEVRAGTGG+EA+
Sbjct: 70  DDPEMREMAQEEIKAARGRLADLEQHLQILLL----PKDPDDERDCFLEVRAGTGGDEAA 125

Query: 82  LFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQ 141
           LFA D+F+MY RY++ + W+ E++  +E +  GYKE  A +SG G YG+LKFESG HRVQ
Sbjct: 126 LFAGDLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIAKVSGDGAYGRLKFESGGHRVQ 185

Query: 142 RVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           RVP TE  GR+HTSA +VA++P   E ++ ++   DLRIDTYRS G+GGQH NTT+SA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIR 245

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH+PTG+ +  QDERSQH NKAKA+ VL A++   E ++     +  R   +GSGDRS+
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEVASTRRNLLGSGDRSD 305

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           R+RTYNFPQGRVTDHR+ +T + + ++MEG+ LD  I+ ++ + + D +++  
Sbjct: 306 RVRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDNLIEPIVQEHQADQLSALA 357


>gi|418632436|ref|ZP_13194867.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU128]
 gi|374832343|gb|EHR96058.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU128]
          Length = 358

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 148/307 (48%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           +TK++E+  ++ ++ E S DK+ ++M  EE      E   ++  L   L+PKD  D++D 
Sbjct: 52  KTKKEELQDIEDMLSETS-DKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+A++V++ +RNEDL+IDTYRS GS
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGS 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   ++ +MEG +LD  ++AL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEG-HLDEIVEALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|312795903|ref|YP_004028825.1| peptide chain release factor 1 (RF-1) [Burkholderia rhizoxinica HKI
           454]
 gi|312167678|emb|CBW74681.1| Bacterial Peptide Chain Release Factor 1 (RF-1) [Burkholderia
           rhizoxinica HKI 454]
          Length = 365

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 205/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D  M D A +EL  A    ++L+  L K LLPKD  DER+  +E+RAGTGG+E++LFA D
Sbjct: 76  DPSMRDFAEDELNTARSRMEQLERDLQKMLLPKDPNDERNIFVEIRAGTGGDESALFAGD 135

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY+++  W+ E++  + SDL GYKE    I G G Y +LKFESG HRVQRVP T
Sbjct: 136 LLRMYLRYAERHRWQVEMMSESASDLGGYKEVIVRIIGQGAYSRLKFESGGHRVQRVPAT 195

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE+ ++ L   DLRIDT+R+ G+GGQH N T+SAVR+TH+P
Sbjct: 196 ETQGRIHTSACTVAVMPEADEIAEIELNPADLRIDTFRASGAGGQHINKTDSAVRITHLP 255

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NK +A+KVL A++ + +    H   +  R   +GSGDRSERIRTY
Sbjct: 256 TGIVVECQDDRSQHKNKDRAMKVLAARIKDKQYQEQHAKEAATRKSLVGSGDRSERIRTY 315

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  MM+G +LD  IDAL+ + + + +A+ G
Sbjct: 316 NFPQGRLTDHRINVTLYKLEQMMDG-DLDALIDALVSEHQAELLAAMG 362


>gi|432372500|ref|ZP_19615545.1| peptide chain release factor 1 [Escherichia coli KTE11]
 gi|430896993|gb|ELC19220.1| peptide chain release factor 1 [Escherichia coli KTE11]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 213/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +ELC A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQDELCEAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++  +E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAETRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIIQEHQADQLAAL 356


>gi|345016594|ref|YP_004818947.1| hypothetical protein Thewi_0154 [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|344031937|gb|AEM77663.1| LOW QUALITY PROTEIN: hypothetical protein Thewi_0154
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 356

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE++ I+E+RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE
Sbjct: 100 PKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKE 159

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
               ISG G Y +LK+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D+
Sbjct: 160 VILNISGKGAYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPSDI 219

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           +ID +RSGG GGQ  NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM 
Sbjct: 220 KIDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMA 279

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
                   ++ R  Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++G +LD  I
Sbjct: 280 LQEQQREIAETRKSQVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDG-DLDEII 338

Query: 298 DALLLQQEMDAIASFG 313
           DAL+L  + + + +  
Sbjct: 339 DALILNDQAEKLKNMN 354


>gi|401674994|ref|ZP_10806989.1| peptide chain release factor 1 [Enterobacter sp. SST3]
 gi|400217759|gb|EJO48650.1| peptide chain release factor 1 [Enterobacter sp. SST3]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q +I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQDDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|91776824|ref|YP_546580.1| peptide chain release factor 1 [Methylobacillus flagellatus KT]
 gi|119361559|sp|Q1GYE8.1|RF1_METFK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91710811|gb|ABE50739.1| bacterial peptide chain release factor 1 (bRF-1) [Methylobacillus
           flagellatus KT]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/291 (52%), Positives = 208/291 (71%), Gaps = 8/291 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M + A EE      +   ++  L K LLPKD  DER+  LE+RAGTGG+E++LFA D
Sbjct: 71  DPEMKEFAQEETEAGKQKLDDIEKQLQKLLLPKDPNDERNIFLEIRAGTGGDESALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++++GWK E+V   ES++ GYKE  A I G G Y KLKFESG HRVQRVP T
Sbjct: 131 LFRMYSRYAERQGWKVEIVSANESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVPET 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA+LP+ DEV DV +   D+RIDT+R+ G+GGQH N T+SAVR+TH P
Sbjct: 191 ETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITHFP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ---IGSGDRSERI 262
           TG+ +  QD RSQH NKA+A++VL A++   +  ++   +SK+ SE+   IGSGDRSERI
Sbjct: 251 TGIVVECQDGRSQHSNKAQAMQVLAARI---KAKQVDEQQSKIASERRSLIGSGDRSERI 307

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQGR+TDHR+ +T + I  + EG ++D  I+AL  + + D +A+ G
Sbjct: 308 RTYNYPQGRITDHRINLTLYKIDAITEG-DMDELINALAAEHQADLLATLG 357


>gi|32267276|ref|NP_861308.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
 gi|46576742|sp|Q7VFA0.1|RF1_HELHP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|32263329|gb|AAP78374.1| peptide chain release factor 1 [Helicobacter hepaticus ATCC 51449]
          Length = 355

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/287 (50%), Positives = 203/287 (70%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           EDK++ ++A EEL      +  L+  +   L+PKD  D ++  LE+RAGTGG+EA +F  
Sbjct: 67  EDKELGELAKEELKDLESAKATLEEEIKLLLIPKDPNDNKNIYLEIRAGTGGDEAGIFVG 126

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+FK Y RY+  + WK E++   E+++ GYKE  A + G G Y KLKFE G HRVQRVP 
Sbjct: 127 DLFKAYCRYADLQKWKVEIISSNENNVGGYKEVIALVKGNGAYSKLKFEGGTHRVQRVPE 186

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA++VAI+P+ D+V++ +   DL+ID +RSGG GGQ  NTT+SAVR+THIP
Sbjct: 187 TESQGRIHTSAITVAIMPEVDDVEININPNDLKIDVFRSGGHGGQSVNTTDSAVRITHIP 246

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+++S+QDE+SQH NK KALK+L A+LYE E    +    + R  Q+GSGDRSERIRTY
Sbjct: 247 TGISVSMQDEKSQHKNKDKALKILKARLYEAELEAQNAQNKEARKTQVGSGDRSERIRTY 306

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           N+PQ R+TDHR+G+T +++ ++M G  LD FI+ L+   +  A+ + 
Sbjct: 307 NYPQNRLTDHRIGLTLYSLEEIMLGGLLDEFINPLIAHAQSQAMGNI 353


>gi|387781776|ref|YP_005792489.1| peptide chain release factor RF-1 [Helicobacter pylori 51]
 gi|261837535|gb|ACX97301.1| peptide chain release factor RF-1 [Helicobacter pylori 51]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL L   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|385215355|ref|YP_005775311.1| peptide chain release factor 1 [Helicobacter pylori F32]
 gi|420493433|ref|ZP_14992004.1| peptide chain release factor 1 [Helicobacter pylori Hp P-16]
 gi|317179883|dbj|BAJ57669.1| peptide chain release factor 1 [Helicobacter pylori F32]
 gi|393112689|gb|EJC13209.1| peptide chain release factor 1 [Helicobacter pylori Hp P-16]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK EVV  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|419837892|ref|ZP_14361330.1| peptide chain release factor 1 [Vibrio cholerae HC-46B1]
 gi|421343895|ref|ZP_15794298.1| peptide chain release factor 1 [Vibrio cholerae HC-43B1]
 gi|421354836|ref|ZP_15805168.1| peptide chain release factor 1 [Vibrio cholerae HE-45]
 gi|423735847|ref|ZP_17709041.1| peptide chain release factor 1 [Vibrio cholerae HC-41B1]
 gi|424010185|ref|ZP_17753119.1| peptide chain release factor 1 [Vibrio cholerae HC-44C1]
 gi|395939975|gb|EJH50656.1| peptide chain release factor 1 [Vibrio cholerae HC-43B1]
 gi|395953961|gb|EJH64574.1| peptide chain release factor 1 [Vibrio cholerae HE-45]
 gi|408629471|gb|EKL02163.1| peptide chain release factor 1 [Vibrio cholerae HC-41B1]
 gi|408856440|gb|EKL96135.1| peptide chain release factor 1 [Vibrio cholerae HC-46B1]
 gi|408863437|gb|EKM02920.1| peptide chain release factor 1 [Vibrio cholerae HC-44C1]
          Length = 362

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIDPVIHEHQADQLAALA 359


>gi|387889182|ref|YP_006319480.1| peptide chain release factor 1 [Escherichia blattae DSM 4481]
 gi|414593613|ref|ZP_11443256.1| peptide chain release factor 1 [Escherichia blattae NBRC 105725]
 gi|386924015|gb|AFJ46969.1| peptide chain release factor 1 [Escherichia blattae DSM 4481]
 gi|403195513|dbj|GAB80908.1| peptide chain release factor 1 [Escherichia blattae NBRC 105725]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/308 (48%), Positives = 219/308 (71%), Gaps = 6/308 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           + R  Q++I+  +S++    +D +M +MA EEL  A  + + L++ L   LLP+D  DER
Sbjct: 54  QWRQNQEDIETAESML----DDPEMKEMAQEELQAARQQREALETELQVLLLPRDPDDER 109

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  +E+RAGTGG+EA+LFA D+F+MY RY++ + W+ EV+  +E +  G+KE  A ISG 
Sbjct: 110 NAFVEIRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEVMSASEGEHGGFKEVIAKISGD 169

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRS 184
           GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS
Sbjct: 170 GVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRS 229

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKA+ VL A++   E ++    
Sbjct: 230 SGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKAMSVLGARIRAAELAKRQQE 289

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + 
Sbjct: 290 EASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQEF 348

Query: 305 EMDAIASF 312
           + D +A+ 
Sbjct: 349 QADQLAAL 356


>gi|342732944|ref|YP_004771783.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-mouse-Japan]
 gi|384456312|ref|YP_005668909.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-mouse-Yit]
 gi|417960276|ref|ZP_12602903.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-1]
 gi|417962249|ref|ZP_12604501.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-2]
 gi|417963914|ref|ZP_12605757.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-3]
 gi|417964957|ref|ZP_12606590.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-4]
 gi|417967756|ref|ZP_12608821.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-co]
 gi|418015648|ref|ZP_12655213.1| peptide chain release factor RF1 [Candidatus Arthromitus sp.
           SFB-mouse-NYU]
 gi|418373195|ref|ZP_12965286.1| Peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-mouse-SU]
 gi|342330399|dbj|BAK57041.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-mouse-Japan]
 gi|345505983|gb|EGX28277.1| peptide chain release factor RF1 [Candidatus Arthromitus sp.
           SFB-mouse-NYU]
 gi|346984657|dbj|BAK80333.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-mouse-Yit]
 gi|380330785|gb|EIA21960.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-2]
 gi|380331373|gb|EIA22428.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-3]
 gi|380331379|gb|EIA22433.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-1]
 gi|380339458|gb|EIA28195.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-4]
 gi|380340794|gb|EIA29344.1| Peptide chain release factor 1 [Candidatus Arthromitus sp. SFB-co]
 gi|380341584|gb|EIA30058.1| Peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-mouse-SU]
          Length = 358

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 212/291 (72%), Gaps = 3/291 (1%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           EDK+  ++A EE+    + +  +++ L   LLPKD  DE++  +E+RAGTGG+EA+LFA 
Sbjct: 69  EDKEFRELAQEEIKELQNNKITIENELKILLLPKDPNDEKNVFVEIRAGTGGDEAALFAA 128

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F+MY +Y + K WK E++ V ++D+ G+KE    I G G Y KLK+ESG+HRVQRVP 
Sbjct: 129 NLFRMYSKYVENKRWKIEMISVNDTDIGGFKEVVFMIKGSGAYSKLKYESGVHRVQRVPD 188

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE SGR+HTSA +VA+LP+ D+VDV +   DLRID +RS G+GGQ  NTT+SAVR+THIP
Sbjct: 189 TEASGRIHTSAATVAVLPEVDDVDVEINQNDLRIDVFRSSGNGGQSVNTTDSAVRITHIP 248

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEM-ERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           +G+ IS QDE+SQ  NK KA+K+L A+L+E+ E+ R+ L  ++ R  Q+GSGDRSERIRT
Sbjct: 249 SGIVISCQDEKSQLKNKEKAMKLLRARLFEIAEQERLKLI-AEDRKSQVGSGDRSERIRT 307

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           YN+PQGRVTDHR+G+T + +   M+G  +D  I+ L+ + + + +   G +
Sbjct: 308 YNYPQGRVTDHRIGLTIYKLDSFMDG-YIDEIIEGLITEDQSEKMKQMGES 357


>gi|385224770|ref|YP_005784695.1| peptide chain release factor RF1 [Helicobacter pylori 83]
 gi|385248583|ref|YP_005776802.1| peptide chain release factor 1 [Helicobacter pylori F57]
 gi|317181378|dbj|BAJ59162.1| peptide chain release factor 1 [Helicobacter pylori F57]
 gi|332672916|gb|AEE69733.1| peptide chain release factor RF1 [Helicobacter pylori 83]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL L   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420451240|ref|ZP_14950094.1| peptide chain release factor 1 [Helicobacter pylori Hp H-45]
 gi|393065172|gb|EJB66002.1| peptide chain release factor 1 [Helicobacter pylori Hp H-45]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEVIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420420826|ref|ZP_14919910.1| peptide chain release factor 1 [Helicobacter pylori NQ4161]
 gi|393035625|gb|EJB36669.1| peptide chain release factor 1 [Helicobacter pylori NQ4161]
          Length = 352

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK EVV  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|387901185|ref|YP_006331524.1| peptide chain release factor 1 [Burkholderia sp. KJ006]
 gi|387576077|gb|AFJ84793.1| Peptide chain release factor 1 [Burkholderia sp. KJ006]
          Length = 360

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  A +   RL+  L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEEEIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEALMDG-DLDELIGALVSEHQAELLASLG 357


>gi|375261422|ref|YP_005020592.1| peptide chain release factor 1 [Klebsiella oxytoca KCTC 1686]
 gi|397658524|ref|YP_006499226.1| peptide chain release factor 1 [Klebsiella oxytoca E718]
 gi|402840452|ref|ZP_10888916.1| peptide chain release factor 1 [Klebsiella sp. OBRC7]
 gi|423103536|ref|ZP_17091238.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5242]
 gi|365910900|gb|AEX06353.1| peptide chain release factor 1 [Klebsiella oxytoca KCTC 1686]
 gi|376385178|gb|EHS97899.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5242]
 gi|394346815|gb|AFN32936.1| Peptide chain release factor 1 [Klebsiella oxytoca E718]
 gi|402285669|gb|EJU34150.1| peptide chain release factor 1 [Klebsiella sp. OBRC7]
          Length = 360

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/309 (49%), Positives = 219/309 (70%), Gaps = 6/309 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++ R  Q +I+  + ++    +D +M +MA EEL  A ++ ++++  L   LLPKD  DE
Sbjct: 53  TDWRQLQDDIEAAQMML----DDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  G+KE  A ISG
Sbjct: 109 RNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYR 183
            GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+R
Sbjct: 169 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPSDLRIDTFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E SR   
Sbjct: 229 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQ 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ +
Sbjct: 289 AEASERRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQE 347

Query: 304 QEMDAIASF 312
            + D +A+ 
Sbjct: 348 YQADQLAAL 356


>gi|308183875|ref|YP_003928008.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
 gi|308059795|gb|ADO01691.1| peptide chain release factor 1 [Helicobacter pylori SJM180]
          Length = 352

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 144/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK EVV  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|167838055|ref|ZP_02464914.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
 gi|424907173|ref|ZP_18330664.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
 gi|390927530|gb|EIP84939.1| peptide chain release factor 1 [Burkholderia thailandensis MSMB43]
          Length = 360

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/295 (51%), Positives = 207/295 (70%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A D   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDELRGARDRMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|162147699|ref|YP_001602160.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209542323|ref|YP_002274552.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|189039975|sp|A9HJ50.1|RF1_GLUDA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|161786276|emb|CAP55858.1| putative peptide chain release factor 1 [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530000|gb|ACI49937.1| peptide chain release factor 1 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 352

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 156/315 (49%), Positives = 225/315 (71%), Gaps = 15/315 (4%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLK-----SLLP 58
           I ELR  ++E    ++L+     D +M ++A  EL     E+ R +  +L+     ++LP
Sbjct: 47  IGELRLAEQEERQSQALLA----DPEMRELAEAEL-----EDLRARIPVLRQDIRIAMLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D+ADER  ILE+R   GG+EA+LFA ++F  Y RY+  +GW+FE++   ES+L G +E 
Sbjct: 98  RDEADERSAILEIRPAAGGDEAALFAAELFDAYRRYAALRGWRFEIMEFDESELGGLREG 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I+G GV+ +LK+ESG+HRVQRVP TE  GR+HTS V+VA+LP+A +VDV++ + DLR
Sbjct: 158 IANITGRGVFARLKYESGVHRVQRVPATESQGRIHTSTVTVAVLPEAGDVDVQINDGDLR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           ID YR+ G+GGQH N T SAVR+TH+PTG+ +++Q+E+SQH N+AKA+K+L A+LYE ER
Sbjct: 218 IDVYRASGAGGQHVNKTESAVRITHLPTGLVVAMQEEKSQHKNRAKAMKILMARLYERER 277

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
           +  H +R+  R  Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + I  +M GE  D F+D
Sbjct: 278 AAAHATRAADRKSQVGTGDRSERIRTYNFPQGRVTDHRINLTAYKIDRVMMGE-FDEFVD 336

Query: 299 ALLLQQEMDAIASFG 313
           AL   ++   +A+ G
Sbjct: 337 ALTQDEQASLLAAEG 351


>gi|420200809|ref|ZP_14706449.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM031]
 gi|394267553|gb|EJE12140.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM031]
          Length = 358

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/307 (47%), Positives = 219/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           +TK++E+  ++ ++ E S DK+ ++M  EE      E   ++  L   L+PKD  D++D 
Sbjct: 52  KTKKEELQDIEDMLSETS-DKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+A++V++++RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIKIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   ++ +MEG +LD  ++AL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEG-HLDEIVEALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|423124391|ref|ZP_17112070.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5250]
 gi|376399836|gb|EHT12449.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5250]
          Length = 393

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 152/309 (49%), Positives = 219/309 (70%), Gaps = 6/309 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++ R  Q +I+  + ++    +D +M +MA EEL  A ++ ++++  L   LLPKD  DE
Sbjct: 86  TDWRQLQDDIEAAQMML----DDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDE 141

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  G+KE  A ISG
Sbjct: 142 RNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISG 201

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYR 183
            GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+R
Sbjct: 202 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPSDLRIDTFR 261

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E SR   
Sbjct: 262 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQ 321

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ +
Sbjct: 322 AEASERRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQE 380

Query: 304 QEMDAIASF 312
            + D +A+ 
Sbjct: 381 YQADQLAAL 389


>gi|365970932|ref|YP_004952493.1| peptide chain release factor 1 [Enterobacter cloacae EcWSU1]
 gi|365749845|gb|AEW74072.1| Peptide chain release factor 1 [Enterobacter cloacae EcWSU1]
          Length = 360

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 219/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELLDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   + +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSANDGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|269961569|ref|ZP_06175931.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
 gi|424045196|ref|ZP_17782762.1| peptide chain release factor 1 [Vibrio cholerae HENC-03]
 gi|269833610|gb|EEZ87707.1| Peptide chain release factor 1 [Vibrio harveyi 1DA3]
 gi|408886639|gb|EKM25309.1| peptide chain release factor 1 [Vibrio cholerae HENC-03]
          Length = 362

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A D  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKDAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E+ R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|420463061|ref|ZP_14961839.1| peptide chain release factor 1 [Helicobacter pylori Hp H-4]
 gi|393080589|gb|EJB81314.1| peptide chain release factor 1 [Helicobacter pylori Hp H-4]
          Length = 352

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+++ GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENNVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|310816145|ref|YP_003964109.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
 gi|385233648|ref|YP_005794990.1| peptide chain release factor 1 [Ketogulonicigenium vulgare WSH-001]
 gi|308754880|gb|ADO42809.1| peptide chain release factor 1 [Ketogulonicigenium vulgare Y25]
 gi|343462559|gb|AEM40994.1| Peptide chain release factor 1 [Ketogulonicigenium vulgare WSH-001]
          Length = 352

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/279 (52%), Positives = 203/279 (72%), Gaps = 2/279 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM   A EEL          +  + K+LLP+D AD R  +LE+R GTGG+EASL
Sbjct: 62  EWLADPDMRAFAEEELPRLRTAFAEAEIEMQKALLPRDAADGRPAMLEIRPGTGGDEASL 121

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY+RYS+ KGW+FE++   E++L G KE    I G GV+ ++K+ESG+HRVQR
Sbjct: 122 FAADLLRMYQRYSESKGWRFEIIEEAETELGGIKEVVVRIEGEGVFARMKYESGVHRVQR 181

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA +VA+LP+A+ VD+ +   D+RIDT R+ G+GGQH NTT+SAVR+T
Sbjct: 182 VPETESGGRIHTSAATVAVLPEAEAVDIEINPGDIRIDTMRASGAGGQHVNTTDSAVRIT 241

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ ++   ++SQH N+  A+ VL A+LY+MERSR+  +RS  R  Q+GSGDRSERI
Sbjct: 242 HLPTGIIVT-SSQKSQHRNRELAMDVLRARLYDMERSRVDGARSADRKAQVGSGDRSERI 300

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYNFPQGR+TDHR+ +T + +  +++G +LD  +DAL+
Sbjct: 301 RTYNFPQGRMTDHRINMTLYRLDQILQG-DLDEIVDALV 338


>gi|94500021|ref|ZP_01306556.1| peptide chain release factor 1 [Bermanella marisrubri]
 gi|94427879|gb|EAT12854.1| peptide chain release factor 1 [Oceanobacter sp. RED65]
          Length = 363

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/290 (50%), Positives = 208/290 (71%), Gaps = 2/290 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM +M  EE   A +E +RL   L   LLPKD  D ++ ILE+RAGTGG+EA++F+ 
Sbjct: 72  DDPDMREMGQEEYSAAKEEIERLDGELQILLLPKDPNDGKNVILEIRAGTGGDEAAIFSG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++K+GWK EV+   E +  GYKE    I+G GVYG+LKFESG HRVQRVP 
Sbjct: 132 DLFRMYTRYAEKRGWKCEVMSANEGEHGGYKEVITRIAGDGVYGQLKFESGAHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQ-ADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  +E DV +   DLRIDT+R+ G+GGQH N T+SA+R+TH+
Sbjct: 192 TESQGRIHTSACTVAVMPEIENEDDVDINKADLRIDTFRASGAGGQHVNKTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  Q+ERSQH N+AKA+ +L  +L +    +    ++  R   +GSGDRSERIRT
Sbjct: 252 PTGLVVECQEERSQHKNRAKAMSILATRLNDAVVQKAQAEQAAERKSLVGSGDRSERIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           YN+PQGRV+DHR+ +T + + ++M+G ++D+ I  LL + + + +AS G+
Sbjct: 312 YNYPQGRVSDHRINLTVYKLDELMQG-DVDMIIQPLLQEHQAELLASMGT 360


>gi|77463465|ref|YP_352969.1| peptide chain release factor 1 [Rhodobacter sphaeroides 2.4.1]
 gi|119361594|sp|Q3J2B6.1|RF1_RHOS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77387883|gb|ABA79068.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodobacter
           sphaeroides 2.4.1]
          Length = 351

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/304 (50%), Positives = 217/304 (71%), Gaps = 12/304 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL--------QSLLLKSL 56
           +EL+    EI   ++ + + +E + ML    E   LA DE   L        Q+L L +L
Sbjct: 38  AELKPVVVEISAYRTALEDLAEAEAMLS-DPEMRALAEDEIPALRARIPGMEQALRL-AL 95

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD AD R  ILE+R GTGGEEA+LFA D+ +MY+RY++ +GW+FE++ +  S+L G +
Sbjct: 96  LPKDAADARPAILEIRPGTGGEEAALFAGDLLRMYQRYAEGQGWRFELLDLAPSELGGIR 155

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           EA+A + G G + +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A+EVD+ +   D
Sbjct: 156 EATARVEGEGAFARLKYESGVHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDLEIPAAD 215

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY++
Sbjct: 216 IRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHRNREIAMQVLRARLYDL 274

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           ER R+  +RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T +A+  +M G +L   
Sbjct: 275 ERQRLADARSADRKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYALPQIMAG-DLSEV 333

Query: 297 IDAL 300
           I AL
Sbjct: 334 ISAL 337


>gi|167038490|ref|YP_001666068.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|320116886|ref|YP_004187045.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|238687641|sp|B0K7G6.1|RF1_THEP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166857324|gb|ABY95732.1| peptide chain release factor 1 [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319929977|gb|ADV80662.1| peptide chain release factor 1 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 356

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 140/256 (54%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE++ I+E+RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE
Sbjct: 100 PKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKE 159

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
               ISG G Y +LK+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D+
Sbjct: 160 VILNISGKGSYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDI 219

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           +ID +RSGG GGQ  NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM 
Sbjct: 220 KIDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMA 279

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
                   ++ R  Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++G +LD  I
Sbjct: 280 LQEQQREIAETRKSQVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDG-DLDEII 338

Query: 298 DALLLQQEMDAIASFG 313
           DAL+L  + + + +  
Sbjct: 339 DALILNDQAEKLKNMN 354


>gi|302342174|ref|YP_003806703.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
 gi|301638787|gb|ADK84109.1| peptide chain release factor 1 [Desulfarculus baarsii DSM 2075]
          Length = 361

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/270 (54%), Positives = 202/270 (74%), Gaps = 5/270 (1%)

Query: 42  IDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWK 101
           +D E+R++ LLL    P+D  DE++ +LE+RAGTGG+EA+LFA ++ +MY RY++ K WK
Sbjct: 94  VDLEQRMRLLLL----PQDPRDEKNVVLEIRAGTGGDEAALFAAELLRMYLRYAELKRWK 149

Query: 102 FEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAI 161
            E++    ++  G+KE  A I+G G Y +LK+ESG HRVQRVP TE  GRVHTSAV+VA+
Sbjct: 150 TEILSQHPTNAGGFKEVIALITGRGAYSQLKYESGAHRVQRVPATESQGRVHTSAVTVAV 209

Query: 162 LPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMN 221
           LP+ADEV+V ++ E+LRID +RS G GGQH NTT+SAVR+TH+PTG+ +S QDE+SQH N
Sbjct: 210 LPEADEVEVDIKPEELRIDYFRSSGPGGQHVNTTDSAVRITHLPTGLVVSCQDEKSQHKN 269

Query: 222 KAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITH 281
           KAKALKVL A+L E        + +  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T 
Sbjct: 270 KAKALKVLAARLLEKMEQEQQAALAANRRSQVGSGDRSERIRTYNFPQGRVTDHRIGLTI 329

Query: 282 HAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           + + +++ GE L++ I  L+   + +A+ S
Sbjct: 330 YKLEEVLVGE-LELIIPHLVAYFQAEALKS 358


>gi|326389251|ref|ZP_08210819.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994614|gb|EGD53038.1| peptide chain release factor 1 [Thermoanaerobacter ethanolicus JW
           200]
          Length = 356

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 139/256 (54%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE++ I+E+RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE
Sbjct: 100 PKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKE 159

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
               ISG G Y +LK+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D+
Sbjct: 160 VILNISGKGAYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDI 219

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           ++D +RSGG GGQ  NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM 
Sbjct: 220 KVDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMA 279

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
                   ++ R  Q+G+G+RSERIRTYNFPQGRVTDHR+G+T + + ++++G +LD  I
Sbjct: 280 LQEQQREIAETRKSQVGTGERSERIRTYNFPQGRVTDHRIGLTLYRLQEVLDG-DLDEII 338

Query: 298 DALLLQQEMDAIASFG 313
           DAL+L  + + + +  
Sbjct: 339 DALILNDQAEKLKNMN 354


>gi|421617613|ref|ZP_16058600.1| peptide chain release factor 1 [Pseudomonas stutzeri KOS6]
 gi|409780393|gb|EKN60024.1| peptide chain release factor 1 [Pseudomonas stutzeri KOS6]
          Length = 360

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/304 (49%), Positives = 218/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q++++G ++L+ +   D DM +MA EE+     + + L++ L + LLPKD  D R+  LE
Sbjct: 59  QQDLEGAQALLKDS--DPDMREMAEEEVAEGKAQLETLEANLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++FA D+F+MY RY++K+GW+ E++  +E +  GYKE  + + G  VY K
Sbjct: 117 IRAGTGGDEAAIFAGDLFRMYSRYAEKQGWRVEILSESEGEHGGYKEVISRVEGDNVYAK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   V +   +LRIDTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAVEINPAELRIDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+PTG+ +  Q+ERSQH N+AKA+  L AKL + + +  H   S+ R
Sbjct: 237 QHVNKTDSAIRITHLPTGIVVECQEERSQHKNRAKAMAWLAAKLQDRQDAAAHKEISETR 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHRV +T +++++++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLNEVI-GGAVEQVIEPLLQEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AALG 359


>gi|303248208|ref|ZP_07334471.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
 gi|302490346|gb|EFL50257.1| peptide chain release factor 1 [Desulfovibrio fructosovorans JJ]
          Length = 357

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/283 (54%), Positives = 204/283 (72%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M ++A  E+    +    L++ L   LLPKD  DE++ +LE+RAGTGGEEA+LFA D
Sbjct: 69  DPEMRELALAEVRTIREALPELEARLKLLLLPKDPMDEKNILLEIRAGTGGEEAALFAGD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ K WK E++  +E+   G+KE  A ISG  VY +LK+ESG HRVQRVP T
Sbjct: 129 LFRMYSRYAETKRWKVEIMSSSETGSGGFKEVIANISGDKVYSRLKYESGAHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSAV+VAI+P+A+EVDV +   DLRID YRS G GGQ  NTT+SAVRVTHIPT
Sbjct: 189 ESQGRIHTSAVTVAIMPEAEEVDVAIDPNDLRIDVYRSSGPGGQSVNTTDSAVRVTHIPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH NKAKALKVL ++L + E+ +  L +   R  Q+GSGDRSERIRTYN
Sbjct: 249 GLVVICQDEKSQHKNKAKALKVLRSRLLQAEQEKQRLEQEASRRSQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQ RVTDHR+ +T + +  ++EG +LD   D L+   + +A+
Sbjct: 309 FPQSRVTDHRINLTLYKLEAVLEG-DLDELFDGLIAHYQSEAL 350


>gi|407791373|ref|ZP_11138458.1| peptide chain release factor 1 [Gallaecimonas xiamenensis 3-C-1]
 gi|407200605|gb|EKE70611.1| peptide chain release factor 1 [Gallaecimonas xiamenensis 3-C-1]
          Length = 363

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/294 (51%), Positives = 204/294 (69%), Gaps = 2/294 (0%)

Query: 24  CSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
             +D +M ++A EE+  A  + + L   L   LLPKD  DER+  LE+RAG GG+EA++F
Sbjct: 70  AGDDAEMRELAQEEVAGAKAQIETLAQELQILLLPKDPNDERNIYLEIRAGAGGDEAAIF 129

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+F+MY RY + + W+ EVV   E +  G+KE  A +SG GVYG+ KFESG HRVQRV
Sbjct: 130 AGDLFRMYSRYCEARRWRVEVVSANEGEHGGFKEVIALVSGDGVYGRFKFESGGHRVQRV 189

Query: 144 PLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GR+HTSA +VAILP+  E + V +   DLRIDT+R+ G+GGQH N T+SAVR+T
Sbjct: 190 PATESQGRIHTSACTVAILPEVPEAEAVNISTADLRIDTFRASGAGGQHVNRTDSAVRIT 249

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ +  Q+ERSQH NKAKAL VL +++  ME  +  LS    R   +GSGDRSERI
Sbjct: 250 HLPTGVVVECQEERSQHKNKAKALSVLASRIQAMEDEKRRLSEEATRRSLVGSGDRSERI 309

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           RTYN+PQGRVTDHR+ +T + + ++MEG +LD  ID ++ + + D +A+    Q
Sbjct: 310 RTYNYPQGRVTDHRINLTLYRLDEVMEG-SLDALIDPIVQEHQADQLAALAQGQ 362


>gi|420473478|ref|ZP_14972156.1| peptide chain release factor 1 [Helicobacter pylori Hp H-19]
 gi|393090606|gb|EJB91239.1| peptide chain release factor 1 [Helicobacter pylori Hp H-19]
          Length = 352

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|238022362|ref|ZP_04602788.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
 gi|237866976|gb|EEP68018.1| hypothetical protein GCWU000324_02269 [Kingella oralis ATCC 51147]
          Length = 358

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 209/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A D  +RL   L K LLPKD  D+++  +E+RAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAFEEIQAAKDTIERLDLELQKLLLPKDADDDKNIFIEIRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V  +ESDL GYKE    + G+G Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYTRYAERNRWQTEIVSASESDLGGYKEVIVRLVGLGAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+  + L ++DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELAKIELNDKDLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD RSQH NK KALKVL A+L ++++   H   +  R   IGSGDRSER
Sbjct: 247 THLPTGLVVECQDGRSQHTNKEKALKVLAARLNDIQKREAHAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G ++D    AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DMDEITSALIAEHQAELLAAMG 357


>gi|110680314|ref|YP_683321.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
 gi|119361597|sp|Q164F8.1|RF1_ROSDO RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109456430|gb|ABG32635.1| peptide chain release factor 1 [Roseobacter denitrificans OCh 114]
          Length = 351

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 157/319 (49%), Positives = 225/319 (70%), Gaps = 16/319 (5%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDML---DMATEELCLAIDEEKRLQSLL-------LK 54
           S+LR   ++I   + L+ +  +  +ML   DMA     LA +E  RL+S L         
Sbjct: 38  SDLRPVVEQISAYQQLLSDLEDAAEMLGDPDMAP----LAEEEIPRLKSALPQAEAALQL 93

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           +LLPKD AD +  +LE+R GTGG+EA+LFA D+F+MY+RY++ +GWK +++ + E++L G
Sbjct: 94  ALLPKDKADAKPAMLEIRPGTGGDEAALFAGDLFRMYQRYAETQGWKVDLIELQETELGG 153

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
            KE  A I G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +  
Sbjct: 154 IKEVVAHIKGADVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIDA 213

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
            DLRIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY
Sbjct: 214 NDLRIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKARLY 272

Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
           ++ERSR+   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +++G +LD
Sbjct: 273 DLERSRVDDERSADRAAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYRLDAVLQG-DLD 331

Query: 295 IFIDALLLQQEMDAIASFG 313
             IDAL    +   +A  G
Sbjct: 332 EIIDALTAHAQAQLMADMG 350


>gi|334124406|ref|ZP_08498415.1| peptide chain release factor RF1 [Enterobacter hormaechei ATCC
           49162]
 gi|333389405|gb|EGK60571.1| peptide chain release factor RF1 [Enterobacter hormaechei ATCC
           49162]
          Length = 360

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEIIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|452850880|ref|YP_007492564.1| Peptide chain release factor 1 [Desulfovibrio piezophilus]
 gi|451894534|emb|CCH47413.1| Peptide chain release factor 1 [Desulfovibrio piezophilus]
          Length = 355

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 153/299 (51%), Positives = 210/299 (70%), Gaps = 9/299 (3%)

Query: 23  ECSEDKDMLDMATE---ELCLAIDEEKRLQSLLLKS-----LLPKDDADERDCILEVRAG 74
           E   +++MLD A E   E+  A  EE   Q  LL++     LLPKD  DE++ ILE+RAG
Sbjct: 57  EIGNNREMLDDADEDIREMAKAEIEELEPQLPLLEAKLKVLLLPKDPMDEKNIILEIRAG 116

Query: 75  TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE 134
           TGG+EA+LFA D+++MY RY+++  WK E +    +   G KE  A+I+G  VY KLK+E
Sbjct: 117 TGGDEAALFAADLYRMYTRYAEENRWKVEEMSSNSTGSGGLKEVIASIAGDKVYSKLKYE 176

Query: 135 SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT 194
           SG HRVQRVP TE  GR+HTSAV+VAI+ +A+EVD+ +RNEDLR+D +R+ G GGQ  NT
Sbjct: 177 SGTHRVQRVPATESQGRIHTSAVTVAIMAEAEEVDIDIRNEDLRVDVFRASGPGGQSVNT 236

Query: 195 TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG 254
           T+SA+R+TH+PTG+ +  QDE+SQH NKAKA+KVL ++L ++E+ +        R  Q+G
Sbjct: 237 TDSAIRITHVPTGLVVICQDEKSQHKNKAKAMKVLRSRLLQLEQDKAKAEEDAARRSQVG 296

Query: 255 SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           +GDRSERIRTYNFPQGRV+DHR+ +T H +  +MEGE L    DAL+   + +A+   G
Sbjct: 297 TGDRSERIRTYNFPQGRVSDHRINLTLHKLPQVMEGE-LAELTDALISHYQSEAMKRQG 354


>gi|420466393|ref|ZP_14965150.1| peptide chain release factor 1 [Helicobacter pylori Hp H-9]
 gi|393084791|gb|EJB85479.1| peptide chain release factor 1 [Helicobacter pylori Hp H-9]
          Length = 352

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|15642178|ref|NP_231810.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|147674456|ref|YP_001217695.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|153213234|ref|ZP_01948646.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|153801649|ref|ZP_01956235.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|153818801|ref|ZP_01971468.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|153823572|ref|ZP_01976239.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|153825583|ref|ZP_01978250.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|153828626|ref|ZP_01981293.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|227082304|ref|YP_002810855.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|227118625|ref|YP_002820521.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|229507743|ref|ZP_04397248.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229512021|ref|ZP_04401500.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229513825|ref|ZP_04403287.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229519157|ref|ZP_04408600.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229522130|ref|ZP_04411547.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229524175|ref|ZP_04413580.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229528814|ref|ZP_04418204.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229607288|ref|YP_002877936.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254291410|ref|ZP_04962203.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|254849258|ref|ZP_05238608.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255745092|ref|ZP_05419041.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262167528|ref|ZP_06035234.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|360036056|ref|YP_004937819.1| peptide chain release factor 1 [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|379741990|ref|YP_005333959.1| peptide chain release factor 1 [Vibrio cholerae IEC224]
 gi|384425148|ref|YP_005634506.1| Peptide chain release factor 1 [Vibrio cholerae LMA3984-4]
 gi|417814208|ref|ZP_12460861.1| peptide chain release factor 1 [Vibrio cholerae HC-49A2]
 gi|417817945|ref|ZP_12464574.1| peptide chain release factor 1 [Vibrio cholerae HCUF01]
 gi|417825416|ref|ZP_12472004.1| peptide chain release factor 1 [Vibrio cholerae HE48]
 gi|418335187|ref|ZP_12944100.1| peptide chain release factor 1 [Vibrio cholerae HC-06A1]
 gi|418338799|ref|ZP_12947693.1| peptide chain release factor 1 [Vibrio cholerae HC-23A1]
 gi|418346721|ref|ZP_12951481.1| peptide chain release factor 1 [Vibrio cholerae HC-28A1]
 gi|418350483|ref|ZP_12955214.1| peptide chain release factor 1 [Vibrio cholerae HC-43A1]
 gi|418356235|ref|ZP_12958954.1| peptide chain release factor 1 [Vibrio cholerae HC-61A1]
 gi|419827139|ref|ZP_14350638.1| peptide chain release factor 1 [Vibrio cholerae CP1033(6)]
 gi|421317810|ref|ZP_15768378.1| peptide chain release factor 1 [Vibrio cholerae CP1032(5)]
 gi|421321935|ref|ZP_15772488.1| peptide chain release factor 1 [Vibrio cholerae CP1038(11)]
 gi|421325738|ref|ZP_15776262.1| peptide chain release factor 1 [Vibrio cholerae CP1041(14)]
 gi|421329397|ref|ZP_15779907.1| peptide chain release factor 1 [Vibrio cholerae CP1042(15)]
 gi|421333303|ref|ZP_15783780.1| peptide chain release factor 1 [Vibrio cholerae CP1046(19)]
 gi|421336894|ref|ZP_15787355.1| peptide chain release factor 1 [Vibrio cholerae CP1048(21)]
 gi|421340321|ref|ZP_15790753.1| peptide chain release factor 1 [Vibrio cholerae HC-20A2]
 gi|421348202|ref|ZP_15798579.1| peptide chain release factor 1 [Vibrio cholerae HC-46A1]
 gi|421351901|ref|ZP_15802266.1| peptide chain release factor 1 [Vibrio cholerae HE-25]
 gi|422897277|ref|ZP_16934723.1| peptide chain release factor 1 [Vibrio cholerae HC-40A1]
 gi|422903471|ref|ZP_16938445.1| peptide chain release factor 1 [Vibrio cholerae HC-48A1]
 gi|422907355|ref|ZP_16942158.1| peptide chain release factor 1 [Vibrio cholerae HC-70A1]
 gi|422914204|ref|ZP_16948710.1| peptide chain release factor 1 [Vibrio cholerae HFU-02]
 gi|422923481|ref|ZP_16956632.1| peptide chain release factor 1 [Vibrio cholerae BJG-01]
 gi|422926408|ref|ZP_16959422.1| peptide chain release factor 1 [Vibrio cholerae HC-38A1]
 gi|423145731|ref|ZP_17133325.1| peptide chain release factor 1 [Vibrio cholerae HC-19A1]
 gi|423150407|ref|ZP_17137721.1| peptide chain release factor 1 [Vibrio cholerae HC-21A1]
 gi|423154225|ref|ZP_17141406.1| peptide chain release factor 1 [Vibrio cholerae HC-22A1]
 gi|423157309|ref|ZP_17144402.1| peptide chain release factor 1 [Vibrio cholerae HC-32A1]
 gi|423160879|ref|ZP_17147819.1| peptide chain release factor 1 [Vibrio cholerae HC-33A2]
 gi|423165705|ref|ZP_17152430.1| peptide chain release factor 1 [Vibrio cholerae HC-48B2]
 gi|423731722|ref|ZP_17705025.1| peptide chain release factor 1 [Vibrio cholerae HC-17A1]
 gi|423769007|ref|ZP_17713149.1| peptide chain release factor 1 [Vibrio cholerae HC-50A2]
 gi|423895607|ref|ZP_17727354.1| peptide chain release factor 1 [Vibrio cholerae HC-62A1]
 gi|423931043|ref|ZP_17731746.1| peptide chain release factor 1 [Vibrio cholerae HC-77A1]
 gi|424003159|ref|ZP_17746234.1| peptide chain release factor 1 [Vibrio cholerae HC-17A2]
 gi|424006947|ref|ZP_17749917.1| peptide chain release factor 1 [Vibrio cholerae HC-37A1]
 gi|424024929|ref|ZP_17764580.1| peptide chain release factor 1 [Vibrio cholerae HC-62B1]
 gi|424027816|ref|ZP_17767419.1| peptide chain release factor 1 [Vibrio cholerae HC-69A1]
 gi|424587094|ref|ZP_18026673.1| peptide chain release factor 1 [Vibrio cholerae CP1030(3)]
 gi|424591886|ref|ZP_18031311.1| peptide chain release factor 1 [Vibrio cholerae CP1037(10)]
 gi|424595743|ref|ZP_18035063.1| peptide chain release factor 1 [Vibrio cholerae CP1040(13)]
 gi|424599659|ref|ZP_18038838.1| peptide chain release factor 1 [Vibrio Cholerae CP1044(17)]
 gi|424602377|ref|ZP_18041518.1| peptide chain release factor 1 [Vibrio cholerae CP1047(20)]
 gi|424607352|ref|ZP_18046294.1| peptide chain release factor 1 [Vibrio cholerae CP1050(23)]
 gi|424611172|ref|ZP_18050011.1| peptide chain release factor 1 [Vibrio cholerae HC-39A1]
 gi|424613984|ref|ZP_18052772.1| peptide chain release factor 1 [Vibrio cholerae HC-41A1]
 gi|424617960|ref|ZP_18056632.1| peptide chain release factor 1 [Vibrio cholerae HC-42A1]
 gi|424622744|ref|ZP_18061249.1| peptide chain release factor 1 [Vibrio cholerae HC-47A1]
 gi|424645708|ref|ZP_18083444.1| peptide chain release factor 1 [Vibrio cholerae HC-56A2]
 gi|424653475|ref|ZP_18090855.1| peptide chain release factor 1 [Vibrio cholerae HC-57A2]
 gi|424657297|ref|ZP_18094582.1| peptide chain release factor 1 [Vibrio cholerae HC-81A2]
 gi|429888058|ref|ZP_19369555.1| Peptide chain release factor 1 [Vibrio cholerae PS15]
 gi|440710369|ref|ZP_20891019.1| peptide chain release factor 1 [Vibrio cholerae 4260B]
 gi|443504526|ref|ZP_21071484.1| peptide chain release factor 1 [Vibrio cholerae HC-64A1]
 gi|443508427|ref|ZP_21075189.1| peptide chain release factor 1 [Vibrio cholerae HC-65A1]
 gi|443512271|ref|ZP_21078908.1| peptide chain release factor 1 [Vibrio cholerae HC-67A1]
 gi|443515824|ref|ZP_21082335.1| peptide chain release factor 1 [Vibrio cholerae HC-68A1]
 gi|443519617|ref|ZP_21086013.1| peptide chain release factor 1 [Vibrio cholerae HC-71A1]
 gi|443524508|ref|ZP_21090721.1| peptide chain release factor 1 [Vibrio cholerae HC-72A2]
 gi|443532104|ref|ZP_21098118.1| peptide chain release factor 1 [Vibrio cholerae HC-7A1]
 gi|443535910|ref|ZP_21101783.1| peptide chain release factor 1 [Vibrio cholerae HC-80A1]
 gi|443539446|ref|ZP_21105300.1| peptide chain release factor 1 [Vibrio cholerae HC-81A1]
 gi|449055408|ref|ZP_21734076.1| Peptide chain release factor 1 [Vibrio cholerae O1 str. Inaba
           G4222]
 gi|20139356|sp|Q9KQ25.1|RF1_VIBCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|172047628|sp|A5F696.1|RF1_VIBC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|254790906|sp|C3LPI4.1|RF1_VIBCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|9656733|gb|AAF95324.1| peptide chain release factor 1 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|124116034|gb|EAY34854.1| peptide chain release factor 1 [Vibrio cholerae 1587]
 gi|124122826|gb|EAY41569.1| peptide chain release factor 1 [Vibrio cholerae MZO-3]
 gi|126510644|gb|EAZ73238.1| peptide chain release factor 1 [Vibrio cholerae NCTC 8457]
 gi|126518907|gb|EAZ76130.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|146316339|gb|ABQ20878.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|148875897|gb|EDL74032.1| peptide chain release factor 1 [Vibrio cholerae 623-39]
 gi|149740734|gb|EDM54833.1| peptide chain release factor 1 [Vibrio cholerae MZO-2]
 gi|150422740|gb|EDN14694.1| peptide chain release factor 1 [Vibrio cholerae AM-19226]
 gi|227010192|gb|ACP06404.1| peptide chain release factor 1 [Vibrio cholerae M66-2]
 gi|227014075|gb|ACP10285.1| peptide chain release factor 1 [Vibrio cholerae O395]
 gi|229332588|gb|EEN98074.1| peptide chain release factor 1 [Vibrio cholerae 12129(1)]
 gi|229337756|gb|EEO02773.1| peptide chain release factor 1 [Vibrio cholerae bv. albensis VL426]
 gi|229341055|gb|EEO06060.1| peptide chain release factor 1 [Vibrio cholerae TM 11079-80]
 gi|229343846|gb|EEO08821.1| peptide chain release factor 1 [Vibrio cholerae RC9]
 gi|229349006|gb|EEO13963.1| peptide chain release factor 1 [Vibrio cholerae TMA 21]
 gi|229351986|gb|EEO16927.1| peptide chain release factor 1 [Vibrio cholerae B33]
 gi|229355248|gb|EEO20169.1| peptide chain release factor 1 [Vibrio cholerae BX 330286]
 gi|229369943|gb|ACQ60366.1| peptide chain release factor 1 [Vibrio cholerae MJ-1236]
 gi|254844963|gb|EET23377.1| peptide chain release factor 1 [Vibrio cholerae MO10]
 gi|255736922|gb|EET92318.1| peptide chain release factor 1 [Vibrio cholera CIRS 101]
 gi|262024100|gb|EEY42795.1| peptide chain release factor 1 [Vibrio cholerae RC27]
 gi|327484701|gb|AEA79108.1| Peptide chain release factor 1 [Vibrio cholerae LMA3984-4]
 gi|340036694|gb|EGQ97670.1| peptide chain release factor 1 [Vibrio cholerae HC-49A2]
 gi|340037668|gb|EGQ98643.1| peptide chain release factor 1 [Vibrio cholerae HCUF01]
 gi|340046901|gb|EGR07831.1| peptide chain release factor 1 [Vibrio cholerae HE48]
 gi|341620915|gb|EGS46669.1| peptide chain release factor 1 [Vibrio cholerae HC-48A1]
 gi|341621115|gb|EGS46867.1| peptide chain release factor 1 [Vibrio cholerae HC-70A1]
 gi|341621667|gb|EGS47406.1| peptide chain release factor 1 [Vibrio cholerae HC-40A1]
 gi|341637107|gb|EGS61799.1| peptide chain release factor 1 [Vibrio cholerae HFU-02]
 gi|341644021|gb|EGS68271.1| peptide chain release factor 1 [Vibrio cholerae BJG-01]
 gi|341646190|gb|EGS70308.1| peptide chain release factor 1 [Vibrio cholerae HC-38A1]
 gi|356417211|gb|EHH70830.1| peptide chain release factor 1 [Vibrio cholerae HC-06A1]
 gi|356418114|gb|EHH71721.1| peptide chain release factor 1 [Vibrio cholerae HC-21A1]
 gi|356422569|gb|EHH76043.1| peptide chain release factor 1 [Vibrio cholerae HC-19A1]
 gi|356428208|gb|EHH81437.1| peptide chain release factor 1 [Vibrio cholerae HC-22A1]
 gi|356430441|gb|EHH83650.1| peptide chain release factor 1 [Vibrio cholerae HC-23A1]
 gi|356433026|gb|EHH86221.1| peptide chain release factor 1 [Vibrio cholerae HC-28A1]
 gi|356439583|gb|EHH92552.1| peptide chain release factor 1 [Vibrio cholerae HC-32A1]
 gi|356444979|gb|EHH97788.1| peptide chain release factor 1 [Vibrio cholerae HC-43A1]
 gi|356445396|gb|EHH98203.1| peptide chain release factor 1 [Vibrio cholerae HC-33A2]
 gi|356450517|gb|EHI03237.1| peptide chain release factor 1 [Vibrio cholerae HC-48B2]
 gi|356452733|gb|EHI05412.1| peptide chain release factor 1 [Vibrio cholerae HC-61A1]
 gi|356647210|gb|AET27265.1| peptide chain release factor 1 [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|378795500|gb|AFC58971.1| peptide chain release factor 1 [Vibrio cholerae IEC224]
 gi|395916068|gb|EJH26898.1| peptide chain release factor 1 [Vibrio cholerae CP1032(5)]
 gi|395917576|gb|EJH28404.1| peptide chain release factor 1 [Vibrio cholerae CP1041(14)]
 gi|395918929|gb|EJH29753.1| peptide chain release factor 1 [Vibrio cholerae CP1038(11)]
 gi|395927931|gb|EJH38694.1| peptide chain release factor 1 [Vibrio cholerae CP1042(15)]
 gi|395928705|gb|EJH39458.1| peptide chain release factor 1 [Vibrio cholerae CP1046(19)]
 gi|395931993|gb|EJH42737.1| peptide chain release factor 1 [Vibrio cholerae CP1048(21)]
 gi|395939604|gb|EJH50286.1| peptide chain release factor 1 [Vibrio cholerae HC-20A2]
 gi|395942781|gb|EJH53457.1| peptide chain release factor 1 [Vibrio cholerae HC-46A1]
 gi|395952346|gb|EJH62960.1| peptide chain release factor 1 [Vibrio cholerae HE-25]
 gi|395958559|gb|EJH69043.1| peptide chain release factor 1 [Vibrio cholerae HC-56A2]
 gi|395958960|gb|EJH69412.1| peptide chain release factor 1 [Vibrio cholerae HC-57A2]
 gi|395961700|gb|EJH72014.1| peptide chain release factor 1 [Vibrio cholerae HC-42A1]
 gi|395970522|gb|EJH80277.1| peptide chain release factor 1 [Vibrio cholerae HC-47A1]
 gi|395972694|gb|EJH82276.1| peptide chain release factor 1 [Vibrio cholerae CP1030(3)]
 gi|395975523|gb|EJH85014.1| peptide chain release factor 1 [Vibrio cholerae CP1047(20)]
 gi|408006824|gb|EKG44945.1| peptide chain release factor 1 [Vibrio cholerae HC-39A1]
 gi|408012341|gb|EKG50125.1| peptide chain release factor 1 [Vibrio cholerae HC-41A1]
 gi|408030245|gb|EKG66914.1| peptide chain release factor 1 [Vibrio cholerae CP1037(10)]
 gi|408031513|gb|EKG68131.1| peptide chain release factor 1 [Vibrio cholerae CP1040(13)]
 gi|408041271|gb|EKG77388.1| peptide chain release factor 1 [Vibrio Cholerae CP1044(17)]
 gi|408042599|gb|EKG78644.1| peptide chain release factor 1 [Vibrio cholerae CP1050(23)]
 gi|408052642|gb|EKG87672.1| peptide chain release factor 1 [Vibrio cholerae HC-81A2]
 gi|408607929|gb|EKK81332.1| peptide chain release factor 1 [Vibrio cholerae CP1033(6)]
 gi|408622959|gb|EKK95921.1| peptide chain release factor 1 [Vibrio cholerae HC-17A1]
 gi|408633467|gb|EKL05811.1| peptide chain release factor 1 [Vibrio cholerae HC-50A2]
 gi|408654475|gb|EKL25617.1| peptide chain release factor 1 [Vibrio cholerae HC-77A1]
 gi|408655407|gb|EKL26532.1| peptide chain release factor 1 [Vibrio cholerae HC-62A1]
 gi|408845555|gb|EKL85671.1| peptide chain release factor 1 [Vibrio cholerae HC-37A1]
 gi|408845693|gb|EKL85808.1| peptide chain release factor 1 [Vibrio cholerae HC-17A2]
 gi|408870231|gb|EKM09511.1| peptide chain release factor 1 [Vibrio cholerae HC-62B1]
 gi|408879119|gb|EKM18112.1| peptide chain release factor 1 [Vibrio cholerae HC-69A1]
 gi|429224896|gb|EKY31206.1| Peptide chain release factor 1 [Vibrio cholerae PS15]
 gi|439974059|gb|ELP50255.1| peptide chain release factor 1 [Vibrio cholerae 4260B]
 gi|443431471|gb|ELS74023.1| peptide chain release factor 1 [Vibrio cholerae HC-64A1]
 gi|443435047|gb|ELS81192.1| peptide chain release factor 1 [Vibrio cholerae HC-65A1]
 gi|443438873|gb|ELS88589.1| peptide chain release factor 1 [Vibrio cholerae HC-67A1]
 gi|443443234|gb|ELS96536.1| peptide chain release factor 1 [Vibrio cholerae HC-68A1]
 gi|443447035|gb|ELT03691.1| peptide chain release factor 1 [Vibrio cholerae HC-71A1]
 gi|443449842|gb|ELT10133.1| peptide chain release factor 1 [Vibrio cholerae HC-72A2]
 gi|443457494|gb|ELT24891.1| peptide chain release factor 1 [Vibrio cholerae HC-7A1]
 gi|443460978|gb|ELT32056.1| peptide chain release factor 1 [Vibrio cholerae HC-80A1]
 gi|443465546|gb|ELT40206.1| peptide chain release factor 1 [Vibrio cholerae HC-81A1]
 gi|448264447|gb|EMB01684.1| Peptide chain release factor 1 [Vibrio cholerae O1 str. Inaba
           G4222]
          Length = 362

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIDPVIHEHQADQLAALA 359


>gi|384895459|ref|YP_005769448.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
 gi|315586075|gb|ADU40456.1| peptide chain release factor RF1 [Helicobacter pylori 35A]
          Length = 352

 Score =  308 bits (790), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL L   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKLLETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V++ +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|386745600|ref|YP_006218817.1| peptide chain release factor 1 [Helicobacter pylori HUP-B14]
 gi|384551849|gb|AFI06797.1| peptide chain release factor 1 [Helicobacter pylori HUP-B14]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|386860344|ref|YP_006273293.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026b]
 gi|418375660|ref|ZP_12965713.1| peptide chain release factor 1 [Burkholderia pseudomallei 354a]
 gi|418537949|ref|ZP_13103578.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026a]
 gi|418545630|ref|ZP_13110882.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258a]
 gi|418545824|ref|ZP_13111066.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258b]
 gi|418552270|ref|ZP_13117142.1| peptide chain release factor 1 [Burkholderia pseudomallei 354e]
 gi|385345548|gb|EIF52246.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258a]
 gi|385349119|gb|EIF55710.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026a]
 gi|385366179|gb|EIF71816.1| peptide chain release factor 1 [Burkholderia pseudomallei 1258b]
 gi|385373349|gb|EIF78400.1| peptide chain release factor 1 [Burkholderia pseudomallei 354e]
 gi|385378143|gb|EIF82645.1| peptide chain release factor 1 [Burkholderia pseudomallei 354a]
 gi|385657472|gb|AFI64895.1| peptide chain release factor 1 [Burkholderia pseudomallei 1026b]
          Length = 356

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/295 (51%), Positives = 207/295 (70%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A D   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 63  ELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 122

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 123 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 182

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 183 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 242

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 243 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 302

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 303 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 356


>gi|159044282|ref|YP_001533076.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
 gi|189039970|sp|A8LLU7.1|RF1_DINSH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|157912042|gb|ABV93475.1| peptide chain release factor 1 [Dinoroseobacter shibae DFL 12]
          Length = 351

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/275 (52%), Positives = 203/275 (73%), Gaps = 2/275 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M  +A EE+         ++  L  +LLPKD AD R  ++E+R GTGGEEA+LFA 
Sbjct: 65  DDPEMRALAEEEIPALKARIPEMEQALRLALLPKDAADARPAMIEIRPGTGGEEAALFAG 124

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY+RY++ +GW+F++V  + ++L G KE  A +SG GV+ KLK+ESG+HRVQRVP+
Sbjct: 125 DLLRMYQRYAEAQGWRFQIVSESLTELGGIKEVIAHVSGSGVFAKLKYESGVHRVQRVPV 184

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GR+HTSA +VA+LP+A+ VD+ +   D+RIDT R+ G+GGQH NTT+SAVR+THIP
Sbjct: 185 TESGGRIHTSAATVAVLPEAEAVDIDIPASDIRIDTMRASGAGGQHVNTTDSAVRITHIP 244

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ ++   E+SQH N+  A++VL A+LY++ER R    RS  R  Q+GSGDRSERIRTY
Sbjct: 245 TGLVVT-SSEKSQHRNRDIAMQVLRARLYDLERQRADAERSAARKGQVGSGDRSERIRTY 303

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           NFPQGR+TDHR+ +T + +  +M+G +LD  I AL
Sbjct: 304 NFPQGRMTDHRINLTLYKLDQVMQG-DLDEVIAAL 337


>gi|419830631|ref|ZP_14354116.1| peptide chain release factor 1 [Vibrio cholerae HC-1A2]
 gi|419834313|ref|ZP_14357768.1| peptide chain release factor 1 [Vibrio cholerae HC-61A2]
 gi|422308120|ref|ZP_16395273.1| peptide chain release factor 1 [Vibrio cholerae CP1035(8)]
 gi|422918020|ref|ZP_16952338.1| peptide chain release factor 1 [Vibrio cholerae HC-02A1]
 gi|423822922|ref|ZP_17716932.1| peptide chain release factor 1 [Vibrio cholerae HC-55C2]
 gi|423856886|ref|ZP_17720738.1| peptide chain release factor 1 [Vibrio cholerae HC-59A1]
 gi|423883189|ref|ZP_17724326.1| peptide chain release factor 1 [Vibrio cholerae HC-60A1]
 gi|423998446|ref|ZP_17741698.1| peptide chain release factor 1 [Vibrio cholerae HC-02C1]
 gi|424017340|ref|ZP_17757169.1| peptide chain release factor 1 [Vibrio cholerae HC-55B2]
 gi|424020264|ref|ZP_17760050.1| peptide chain release factor 1 [Vibrio cholerae HC-59B1]
 gi|424625641|ref|ZP_18064102.1| peptide chain release factor 1 [Vibrio cholerae HC-50A1]
 gi|424630124|ref|ZP_18068411.1| peptide chain release factor 1 [Vibrio cholerae HC-51A1]
 gi|424634171|ref|ZP_18072271.1| peptide chain release factor 1 [Vibrio cholerae HC-52A1]
 gi|424637249|ref|ZP_18075257.1| peptide chain release factor 1 [Vibrio cholerae HC-55A1]
 gi|424641158|ref|ZP_18079041.1| peptide chain release factor 1 [Vibrio cholerae HC-56A1]
 gi|424649226|ref|ZP_18086889.1| peptide chain release factor 1 [Vibrio cholerae HC-57A1]
 gi|443528140|ref|ZP_21094188.1| peptide chain release factor 1 [Vibrio cholerae HC-78A1]
 gi|341636902|gb|EGS61596.1| peptide chain release factor 1 [Vibrio cholerae HC-02A1]
 gi|408011751|gb|EKG49555.1| peptide chain release factor 1 [Vibrio cholerae HC-50A1]
 gi|408017835|gb|EKG55316.1| peptide chain release factor 1 [Vibrio cholerae HC-52A1]
 gi|408022947|gb|EKG60131.1| peptide chain release factor 1 [Vibrio cholerae HC-56A1]
 gi|408023380|gb|EKG60552.1| peptide chain release factor 1 [Vibrio cholerae HC-55A1]
 gi|408032175|gb|EKG68767.1| peptide chain release factor 1 [Vibrio cholerae HC-57A1]
 gi|408054578|gb|EKG89546.1| peptide chain release factor 1 [Vibrio cholerae HC-51A1]
 gi|408618609|gb|EKK91682.1| peptide chain release factor 1 [Vibrio cholerae CP1035(8)]
 gi|408620404|gb|EKK93416.1| peptide chain release factor 1 [Vibrio cholerae HC-1A2]
 gi|408634898|gb|EKL07133.1| peptide chain release factor 1 [Vibrio cholerae HC-55C2]
 gi|408640491|gb|EKL12283.1| peptide chain release factor 1 [Vibrio cholerae HC-59A1]
 gi|408641313|gb|EKL13094.1| peptide chain release factor 1 [Vibrio cholerae HC-60A1]
 gi|408649135|gb|EKL20452.1| peptide chain release factor 1 [Vibrio cholerae HC-61A2]
 gi|408852801|gb|EKL92623.1| peptide chain release factor 1 [Vibrio cholerae HC-02C1]
 gi|408859848|gb|EKL99502.1| peptide chain release factor 1 [Vibrio cholerae HC-55B2]
 gi|408867358|gb|EKM06720.1| peptide chain release factor 1 [Vibrio cholerae HC-59B1]
 gi|443453656|gb|ELT17475.1| peptide chain release factor 1 [Vibrio cholerae HC-78A1]
          Length = 362

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIDPVIHEHQADQLAALA 359


>gi|298529663|ref|ZP_07017066.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511099|gb|EFI35002.1| peptide chain release factor 1 [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 356

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/275 (54%), Positives = 201/275 (73%), Gaps = 1/275 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ ++A  EL    +E+ RL+  L   L+P D  D+++ ILE+RAGTGGEEA+LFA D
Sbjct: 69  DPEIRELAQAELETLQEEKDRLEEDLKIQLVPSDPLDDKNIILEIRAGTGGEEAALFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++++ WK EV+ + E+   G KE  A+ISG  VY +LK+ESG+HRVQRVP T
Sbjct: 129 LFRMYFRYAEERSWKVEVLNMQETGTGGIKEVIASISGKKVYSRLKYESGVHRVQRVPET 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GRVHTSAV+VAILP+A+EVDV +   DLR+D +R+ G GGQ  NTT+SAVR+THIPT
Sbjct: 189 ESQGRVHTSAVTVAILPEAEEVDVNIEPNDLRVDVFRASGPGGQSVNTTDSAVRITHIPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +S QDE+SQH N+AKALKVL ++L ++            R  Q+GSGDRSERIRTYN
Sbjct: 249 GLVVSCQDEKSQHKNRAKALKVLRSRLLQIMEEEQKREYDDNRRAQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           FPQ RVTDHR+ +T + +  +M+G +LD  ID L+
Sbjct: 309 FPQSRVTDHRINLTLYNLESVMQG-HLDGIIDPLV 342


>gi|386834324|ref|YP_006239639.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. 3480]
 gi|385201025|gb|AFI45880.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. 3480]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D  M +MA EE+     E ++++  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPSMKEMAQEEIETCKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K WK EV+   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL +++ + E+ R   +++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|260772290|ref|ZP_05881206.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
 gi|260611429|gb|EEX36632.1| peptide chain release factor 1 [Vibrio metschnikovii CIP 69.14]
          Length = 362

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 145/288 (50%), Positives = 209/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A  E +RL + L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEMKAAKAEIERLSAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSASEAEHGGYKEMIAKVNGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  +     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLGARIVQAEEKKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQ RV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+ 
Sbjct: 312 YNYPQSRVSDHRINLTIYRLNEVMEG-DLQALIDPVVQEHQADLLAAL 358


>gi|225023585|ref|ZP_03712777.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
 gi|224943680|gb|EEG24889.1| hypothetical protein EIKCOROL_00444 [Eikenella corrodens ATCC
           23834]
          Length = 358

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 149/288 (51%), Positives = 210/288 (72%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M D A EE+  A  + + L + L K LLPKD+ D ++  LEVRAGTGG+EA+LFA D
Sbjct: 71  DPEMKDFAAEEIEAAKAKIETLDTELQKLLLPKDEDDGKNIFLEVRAGTGGDEAALFAAD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY+++  W+ E+V   ESDL GYKE  A I+G+G YG+LKFESG HRVQRVP T
Sbjct: 131 LLRMYTRYAERNRWQVEIVSANESDLGGYKEVIARIAGIGAYGRLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE+ +++L   +LRIDT+R+ G+GGQH N T+SA+R+TH+P
Sbjct: 191 ESQGRIHTSACTVAVMPEADELEEIQLNPAELRIDTFRASGAGGQHINKTDSAIRITHLP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSERIRTY
Sbjct: 251 TGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLIGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQGRVTDHR+ +T H +  +M+G +++   +AL+ + + + +A+ G
Sbjct: 311 NYPQGRVTDHRINLTLHKLDFVMDG-DMEEITNALIAEHQAELLAAMG 357


>gi|53720682|ref|YP_109668.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76809766|ref|YP_334968.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126440521|ref|YP_001060595.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126454756|ref|YP_001067845.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134283294|ref|ZP_01769995.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|167721407|ref|ZP_02404643.1| peptide chain release factor 1 [Burkholderia pseudomallei DM98]
 gi|167740375|ref|ZP_02413149.1| peptide chain release factor 1 [Burkholderia pseudomallei 14]
 gi|167817592|ref|ZP_02449272.1| peptide chain release factor 1 [Burkholderia pseudomallei 91]
 gi|167825994|ref|ZP_02457465.1| peptide chain release factor 1 [Burkholderia pseudomallei 9]
 gi|167847481|ref|ZP_02472989.1| peptide chain release factor 1 [Burkholderia pseudomallei B7210]
 gi|167896069|ref|ZP_02483471.1| peptide chain release factor 1 [Burkholderia pseudomallei 7894]
 gi|167904455|ref|ZP_02491660.1| peptide chain release factor 1 [Burkholderia pseudomallei NCTC
           13177]
 gi|167912716|ref|ZP_02499807.1| peptide chain release factor 1 [Burkholderia pseudomallei 112]
 gi|167920676|ref|ZP_02507767.1| peptide chain release factor 1 [Burkholderia pseudomallei BCC215]
 gi|217424712|ref|ZP_03456209.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|226198171|ref|ZP_03793742.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237813980|ref|YP_002898431.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242316197|ref|ZP_04815213.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254190473|ref|ZP_04896981.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|254198514|ref|ZP_04904935.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|254260133|ref|ZP_04951187.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
 gi|254300725|ref|ZP_04968170.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|403520285|ref|YP_006654419.1| peptide chain release factor 1 [Burkholderia pseudomallei BPC006]
 gi|61214599|sp|Q63QF0.1|RF1_BURPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361515|sp|Q3JN85.1|RF1_BURP1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223535|sp|A3NZS4.1|RF1_BURP0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223536|sp|A3NE24.1|RF1_BURP6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52211096|emb|CAH37084.1| peptide chain release factor 1 [Burkholderia pseudomallei K96243]
 gi|76579219|gb|ABA48694.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710b]
 gi|126220014|gb|ABN83520.1| peptide chain release factor 1 [Burkholderia pseudomallei 668]
 gi|126228398|gb|ABN91938.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106a]
 gi|134245489|gb|EBA45582.1| peptide chain release factor 1 [Burkholderia pseudomallei 305]
 gi|157810508|gb|EDO87678.1| peptide chain release factor 1 [Burkholderia pseudomallei 406e]
 gi|157938149|gb|EDO93819.1| peptide chain release factor 1 [Burkholderia pseudomallei Pasteur
           52237]
 gi|169655254|gb|EDS87947.1| peptide chain release factor 1 [Burkholderia pseudomallei S13]
 gi|217392168|gb|EEC32193.1| peptide chain release factor 1 [Burkholderia pseudomallei 576]
 gi|225929691|gb|EEH25707.1| peptide chain release factor 1 [Burkholderia pseudomallei Pakistan
           9]
 gi|237505256|gb|ACQ97574.1| peptide chain release factor 1 [Burkholderia pseudomallei MSHR346]
 gi|242139436|gb|EES25838.1| peptide chain release factor 1 [Burkholderia pseudomallei 1106b]
 gi|254218822|gb|EET08206.1| peptide chain release factor 1 [Burkholderia pseudomallei 1710a]
 gi|403075927|gb|AFR17507.1| peptide chain release factor 1 [Burkholderia pseudomallei BPC006]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 152/295 (51%), Positives = 207/295 (70%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A D   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|384887120|ref|YP_005761631.1| peptide chain release factor RF-1 [Helicobacter pylori 52]
 gi|261838950|gb|ACX98715.1| peptide chain release factor RF-1 [Helicobacter pylori 52]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|78065073|ref|YP_367842.1| peptide chain release factor 1 [Burkholderia sp. 383]
 gi|119361516|sp|Q39K18.1|RF1_BURS3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77965818|gb|ABB07198.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia sp.
           383]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 207/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D  M D A +E+  A +   RL++ L K LLPKD  DER+  LE+RAGTGG+E++LFA D
Sbjct: 71  DLSMRDFAEDEIRSARESMSRLETELQKMLLPKDPNDERNIFLEIRAGTGGDESALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQRVP T
Sbjct: 131 LLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRVTHIP
Sbjct: 191 ETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSERIRTY
Sbjct: 251 TGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 311 NFPQGRMTDHRINLTLYRLEALMDG-DLDELISALVSEHQAELLASLG 357


>gi|420421457|ref|ZP_14920535.1| peptide chain release factor 1 [Helicobacter pylori NQ4110]
 gi|393037975|gb|EJB39009.1| peptide chain release factor 1 [Helicobacter pylori NQ4110]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|217034576|ref|ZP_03439984.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
 gi|216942931|gb|EEC22416.1| hypothetical protein HP9810_903g1 [Helicobacter pylori 98-10]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|332140922|ref|YP_004426660.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|332140929|ref|YP_004426667.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|410861179|ref|YP_006976413.1| peptide chain release factor 1 [Alteromonas macleodii AltDE1]
 gi|238693241|sp|B4RSV6.1|RF1_ALTMD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|327550944|gb|AEA97662.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550951|gb|AEA97669.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|410818441|gb|AFV85058.1| peptide chain release factor 1 [Alteromonas macleodii AltDE1]
          Length = 361

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 208/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL++ L   LLPKD  D+ +C LE+RAG GG+EA++FA 
Sbjct: 72  DDAEMREMAQEEMKEAKGEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ +GW+ E+V   ES+  GYKE  A +SG GVYG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAESRGWRVELVNANESEHGGYKEVVANVSGDGVYGVLKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA+LP+  E + + +   +LRIDT+R+ G+GGQH N T+SA+R+TH+
Sbjct: 192 TESQGRIHTSACTVAVLPEIPESEAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH N+AKA+ VL A+L ++E  +     +  R   +GSGDRSERIRT
Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLVGSGDRSERIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + +++EG +L   +D +L + + D +AS 
Sbjct: 312 YNFPQGRVTDHRINLTIYRLDEVVEG-DLKQLVDPILQEHQADLLASL 358


>gi|386752059|ref|YP_006225278.1| peptide chain release factor 1 [Helicobacter pylori Shi169]
 gi|384558317|gb|AFH98784.1| peptide chain release factor 1 [Helicobacter pylori Shi169]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|449473633|ref|XP_004153936.1| PREDICTED: peptide chain release factor 1-like [Cucumis sativus]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAELRRWRVEIMSANEGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|268678716|ref|YP_003303147.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
 gi|268616747|gb|ACZ11112.1| peptide chain release factor 1 [Sulfurospirillum deleyianum DSM
           6946]
          Length = 355

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/281 (52%), Positives = 202/281 (71%), Gaps = 2/281 (0%)

Query: 34  ATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYER 93
           A EEL L    ++ L+  +   LLPKD  DER+  LE+RAGTGG+EA++FA D+FK Y R
Sbjct: 75  AKEELKLLEPHKEILEDEIKLLLLPKDPNDERNIFLEIRAGTGGDEAAIFAADLFKSYLR 134

Query: 94  YSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVH 153
           Y++ +GWK EVV ++E  L GYKE  A I G G + +LK+E G+HRVQRVPLTE  GRVH
Sbjct: 135 YAENRGWKVEVVSLSEGVLNGYKEVIALIKGQGAFSRLKYEGGVHRVQRVPLTESQGRVH 194

Query: 154 TSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQ 213
           TSAV+VA++P+ D+V+V ++ +DL+ID  RS G+GGQ  NTT+SAVR+TH+PTG+ +  Q
Sbjct: 195 TSAVTVAVMPEVDDVEVDIQEKDLKIDVMRSSGNGGQSVNTTDSAVRITHLPTGIVVVNQ 254

Query: 214 DERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVT 273
           D +SQH NK  A+K+L AKLY+M+    +   S+ R +Q+GSGDRS RIRTYN+PQ R+T
Sbjct: 255 DGKSQHKNKDAAMKILKAKLYDMQMQERNAKESEARKQQVGSGDRSARIRTYNYPQNRIT 314

Query: 274 DHRVGITHHAISDMMEGENLDIFIDALL--LQQEMDAIASF 312
           DHRVG+T + +  +MEG   D  ID ++   Q E+   A+F
Sbjct: 315 DHRVGLTLYRLDAIMEGGLYDELIDPIITHYQAELMKEANF 355


>gi|401764069|ref|YP_006579076.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ENHKU01]
 gi|400175603|gb|AFP70452.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ENHKU01]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 219/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   + +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANDGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|420491997|ref|ZP_14990573.1| peptide chain release factor 1 [Helicobacter pylori Hp P-15]
 gi|420525764|ref|ZP_15024167.1| peptide chain release factor 1 [Helicobacter pylori Hp P-15b]
 gi|393108692|gb|EJC09226.1| peptide chain release factor 1 [Helicobacter pylori Hp P-15]
 gi|393133785|gb|EJC34201.1| peptide chain release factor 1 [Helicobacter pylori Hp P-15b]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFESG HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKRWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFESGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420436481|ref|ZP_14935474.1| peptide chain release factor 1 [Helicobacter pylori Hp H-28]
 gi|420459550|ref|ZP_14958350.1| peptide chain release factor 1 [Helicobacter pylori Hp A-27]
 gi|393054792|gb|EJB55716.1| peptide chain release factor 1 [Helicobacter pylori Hp H-28]
 gi|393077634|gb|EJB78382.1| peptide chain release factor 1 [Helicobacter pylori Hp A-27]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|350551845|ref|ZP_08921056.1| Peptide chain release factor 1 [Thiorhodospira sibirica ATCC
           700588]
 gi|349796062|gb|EGZ49853.1| Peptide chain release factor 1 [Thiorhodospira sibirica ATCC
           700588]
          Length = 362

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 148/285 (51%), Positives = 207/285 (72%), Gaps = 2/285 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++  +A EEL L       L+  L + LLP D  D+ +  +E+RAGTGG+EA+LFA D
Sbjct: 73  DPEVRALAEEELGLCEQRHAVLELDLQRHLLPTDPHDQSNIFIEIRAGTGGDEAALFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++++GW+ EV+ ++ES+  GYKE  A I G G Y +LKFESG HRVQRVP T
Sbjct: 133 LFRMYARYAEQRGWQMEVLSMSESEQGGYKEIIARIIGHGAYSRLKFESGAHRVQRVPQT 192

Query: 147 EKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +V I+P+ DE++  ++   DLRIDTYR+ G+GGQH N T+SAVR+TH+P
Sbjct: 193 ESQGRIHTSAATVVIMPEPDEIEAPQINPADLRIDTYRASGAGGQHVNRTDSAVRLTHLP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           +G+ +  QDERSQH NKA+A+ +L AKL+E+E+ R   ++S  R   +GSGDRSERIRTY
Sbjct: 253 SGIVVECQDERSQHKNKARAMSLLAAKLFEVEQKRQQDAQSATRKSLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           NFPQGRVTDHR+ +T + +  +MEGE LD  I+ L+ + + + +A
Sbjct: 313 NFPQGRVTDHRINLTLYKLDVIMEGE-LDAVIEPLINEYQAEQLA 356


>gi|73542728|ref|YP_297248.1| peptide chain release factor 1 [Ralstonia eutropha JMP134]
 gi|119361585|sp|Q46WS9.1|RF1_RALEJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|72120141|gb|AAZ62404.1| bacterial peptide chain release factor 1 (bRF-1) [Ralstonia
           eutropha JMP134]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M D A +E+  A +  + L+  L K LLPKD  D+R+ ILE+RAGTGGEE++LFA 
Sbjct: 70  DDPEMKDFAADEIASARERLESLEGSLQKLLLPKDPNDDRNLILEIRAGTGGEESALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY R+++++ W+ E++  +ESDL GYKE    I+G   + +LKFESG HRVQRVP 
Sbjct: 130 DLLRMYTRFAERQRWQVEIMSESESDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADEV DV +   DLRIDT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 190 TEAQGRIHTSACTVAVMPEADEVGDVEINPSDLRIDTFRASGAGGQHVNKTDSAVRLTHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QD+RSQH NK KA+KVL A++ + +        +  R   IGSGDRS+RIRT
Sbjct: 250 PTGIVVECQDDRSQHRNKDKAMKVLAARIKDQQMRAAQAKEASTRRNLIGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + I  +M+G +L+  + AL  + + D +A+ G
Sbjct: 310 YNFPQGRVTDHRINLTLYKIDMIMDG-DLEELVSALAAEHQADQLAALG 357


>gi|308182253|ref|YP_003926380.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
 gi|420426270|ref|ZP_14925326.1| peptide chain release factor 1 [Helicobacter pylori Hp A-9]
 gi|308064438|gb|ADO06330.1| peptide chain release factor 1 [Helicobacter pylori PeCan4]
 gi|393044990|gb|EJB45980.1| peptide chain release factor 1 [Helicobacter pylori Hp A-9]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|425788711|ref|YP_007016631.1| peptide chain release factor 1 [Helicobacter pylori Aklavik117]
 gi|425627026|gb|AFX90494.1| peptide chain release factor 1 [Helicobacter pylori Aklavik117]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|339327370|ref|YP_004687063.1| peptide chain release factor 1 [Cupriavidus necator N-1]
 gi|338167527|gb|AEI78582.1| peptide chain release factor 1 [Cupriavidus necator N-1]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M D A +E+  A    + L++ L + LLPKD  D+R+ +LE+RAGTGGEE++LFA 
Sbjct: 70  DDPEMKDFAADEIASARARLEALEASLQRLLLPKDPNDDRNLLLEIRAGTGGEESALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY++++ W+ EV+  +ESDL GYKE    I+G   + +LKFESG HRVQRVP 
Sbjct: 130 DLLRMYTRYAERQRWQVEVMSESESDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADEV +V +   DLRIDT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 190 TEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVRLTHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QD+RSQH NK KA+KVL A++ +M+        +  R   IGSGDRS+RIRT
Sbjct: 250 PTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAKEASTRRNLIGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + I  +M+G ++D  + AL  + + D +A+ G
Sbjct: 310 YNFPQGRVTDHRINLTLYKIDMIMDG-DMDELLSALASEHQADQLAALG 357


>gi|15602420|ref|NP_245492.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. Pm70]
 gi|378774264|ref|YP_005176507.1| peptide chain release factor 1 [Pasteurella multocida 36950]
 gi|421263288|ref|ZP_15714345.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. P52VAC]
 gi|425063244|ref|ZP_18466369.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
           gallicida X73]
 gi|13431785|sp|P57852.1|RF1_PASMU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|12720821|gb|AAK02639.1| PrfA [Pasteurella multocida subsp. multocida str. Pm70]
 gi|356596812|gb|AET15538.1| peptide chain release factor 1 [Pasteurella multocida 36950]
 gi|401689798|gb|EJS85175.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. P52VAC]
 gi|404382807|gb|EJZ79264.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
           gallicida X73]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D  M +MA EE+     E ++++  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K WK EV+   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL +++ + E+ R   +++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|315497942|ref|YP_004086746.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
 gi|315415954|gb|ADU12595.1| peptide chain release factor 1 [Asticcacaulis excentricus CB 48]
          Length = 358

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/266 (54%), Positives = 204/266 (76%), Gaps = 5/266 (1%)

Query: 36  EELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYS 95
           +EL   + E +R  +LLL    PKD  +    ILEVRAGTGG+EA+LFA D+F+MY RY+
Sbjct: 82  QELKERLPELERGVALLLA---PKDKDENASAILEVRAGTGGDEAALFAGDLFRMYSRYA 138

Query: 96  QKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTS 155
             +GW+ E+  ++E D  GYKE  A+++G GV+GKLKFESG+HRVQRVP TE  GR+HTS
Sbjct: 139 ASQGWRVEIDSISEGDAGGYKEIIASVTGDGVFGKLKFESGVHRVQRVPATEAGGRIHTS 198

Query: 156 AVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDE 215
           A +VA+LP+A++V++ ++++D+RIDTYR+ GSGGQH N T+SAVR+TH+PTG+ ++   E
Sbjct: 199 AATVAVLPEAEDVEIDIQDKDIRIDTYRASGSGGQHVNKTDSAVRITHLPTGI-VATSSE 257

Query: 216 RSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDH 275
           +SQHMN+  A++ L A+LY+++R  +  +RS  R  Q+GSGDRSERIRTYN+PQGRV+DH
Sbjct: 258 KSQHMNRQIAMRNLKARLYDIQRQALDAARSDARKSQVGSGDRSERIRTYNYPQGRVSDH 317

Query: 276 RVGITHHAISDMMEGENLDIFIDALL 301
           R+ +T + +S  MEGE +D  I+AL+
Sbjct: 318 RINLTLYNLSQFMEGE-MDQMINALI 342


>gi|149914649|ref|ZP_01903179.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
 gi|149811442|gb|EDM71277.1| peptide chain release factor 1 [Roseobacter sp. AzwK-3b]
          Length = 351

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 221/311 (71%), Gaps = 3/311 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           ++ E+R  ++ +D L++     + D +M D+A EEL      + +L+  L  +LLPKD A
Sbjct: 43  VVEEIRAYRQVLDDLEAARAMLA-DPEMRDLAEEELTALQARKPKLEEQLQLALLPKDKA 101

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R  ILE+R GTGGEEA+LFA D+ +MY RY++ +GW FE++   E++L G KE  A +
Sbjct: 102 DARPAILEIRPGTGGEEAALFAGDLLRMYHRYAEARGWSFEIIEQNETELGGIKEVIARV 161

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
           +G  V+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VDV++   DLRIDT 
Sbjct: 162 AGDHVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDVQIDPGDLRIDTM 221

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY++ER R  
Sbjct: 222 RSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHRNREIAMQVLKTRLYDLERQRAA 280

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
             RS  R+ Q+G+GDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  IDAL  
Sbjct: 281 DERSASRAAQVGTGDRSERIRTYNFPQGRMTDHRINLTLYKLDQVMQG-DLDEVIDALRA 339

Query: 303 QQEMDAIASFG 313
             +   +A  G
Sbjct: 340 DAQATLLAEMG 350


>gi|333893681|ref|YP_004467556.1| peptide chain release factor 1 [Alteromonas sp. SN2]
 gi|332993699|gb|AEF03754.1| peptide chain release factor 1 [Alteromonas sp. SN2]
          Length = 361

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/303 (49%), Positives = 214/303 (70%), Gaps = 4/303 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q+ +D    ++ E  +D +M +MA EEL +A  + +RL++ L   LLPKD  D+ +C LE
Sbjct: 59  QENLDSANEMLKE--DDAEMREMAQEELKIAKADIERLETELQVLLLPKDPNDDSNCFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           VRAG GG+EA++FA D+F+MY RY++ KGW+ E++   E +  GYKE  A ISG GVYG 
Sbjct: 117 VRAGAGGDEAAIFAGDLFRMYSRYAETKGWRVELINANEGEHGGYKEVVANISGDGVYGI 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+  E + + +   DLRIDT+R+ G+GG
Sbjct: 177 LKFESGGHRVQRVPDTESQGRIHTSACTVAVLPEIPESEAIDINPADLRIDTFRASGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  QDERSQH N+AKA+ VL A+L  +E  +     +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGLVVECQDERSQHKNRAKAMSVLQARLNNIEEEKRAAEEASTR 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNFPQGRVTDHR+ +T + + +++EG+ L   +D ++ + + D +
Sbjct: 297 KSLVGSGDRSERIRTYNFPQGRVTDHRINLTIYRLDEVIEGD-LKQLLDPIMQEHQADLL 355

Query: 310 ASF 312
           AS 
Sbjct: 356 ASL 358


>gi|254787712|ref|YP_003075141.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
 gi|259585256|sp|C5BSZ6.1|RF1_TERTT RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|237684441|gb|ACR11705.1| peptide chain release factor 1 [Teredinibacter turnerae T7901]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM +MA EEL  A  + + L++ L K LLPKD  DE++  LE+RAGTGG+EA++F+ D
Sbjct: 73  DADMREMAQEELKTAEAQLEPLETQLQKLLLPKDPNDEKNVFLEIRAGTGGDEAAIFSGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++ GW+ E++     +  GYKE    + G GVY +LKFESG HRVQRVP T
Sbjct: 133 LFRMYSRYAERAGWRIEIISENAGEHGGYKELITRVVGQGVYSQLKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VAI+P+ADE  +V L   DLRIDT+R+ G+GGQH N T+SA+R+THIP
Sbjct: 193 ESQGRIHTSACTVAIMPEADESEEVELNKGDLRIDTFRASGAGGQHVNKTDSAIRITHIP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH N+AKA+ +L A++   +  +    ++  R   +GSGDRSERIRTY
Sbjct: 253 TGIVVECQDERSQHKNRAKAMSLLAARINSAQAEQFAAEQASERKSLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           N+PQGRVTDHR+ +T + + ++MEG +LD  I  L+ + + D +A+  +
Sbjct: 313 NYPQGRVTDHRINLTLYKLDEIMEG-SLDEVIQPLVNEHQADQLAALAN 360


>gi|163784022|ref|ZP_02178981.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880707|gb|EDP74252.1| peptide chain release factor RF-1 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 359

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 143/270 (52%), Positives = 207/270 (76%), Gaps = 3/270 (1%)

Query: 44  EEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFE 103
           ++++L+S +  +L+PKD  D+++ ILE+R G GG+EA+LFA ++F+MY+RY++K GWK E
Sbjct: 90  QKEKLESEIQIALIPKDPNDDKNVILEIRQGAGGDEAALFAAELFRMYQRYAEKNGWKVE 149

Query: 104 VVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILP 163
           ++ + E++  G KE  A I G G Y KLK+ESG+HRVQRVP TE SGR+HTS  +VA+LP
Sbjct: 150 ILSLHENERGGIKEVIALIKGEGAYSKLKYESGVHRVQRVPETESSGRIHTSTATVAVLP 209

Query: 164 QADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKA 223
           +A+EVDV +  +DL+I+T R+ G+GGQH NTT+SAVR+THIPTG+ +S QDERSQ  N+A
Sbjct: 210 EAEEVDVEINPDDLKIETMRASGAGGQHVNTTDSAVRITHIPTGIVVSCQDERSQLQNRA 269

Query: 224 KALKVLCAKLYEMERSRIHLSRSKL-RSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHH 282
           KA+++L A+L +    RI   + K  R  Q+G+GDRSE+IRTYNFPQ RVTDHR+G T H
Sbjct: 270 KAMQILRARLKDY-YDRIQQEKIKSERKSQVGTGDRSEKIRTYNFPQNRVTDHRIGYTSH 328

Query: 283 AISDMMEGENLDIFIDALLLQQEMDAIASF 312
            I+++++GE LD  ID L+L+ + + ++S 
Sbjct: 329 RINEILDGE-LDEIIDQLILKDQEEKLSSL 357


>gi|254226890|ref|ZP_04920458.1| peptide chain release factor 1 [Vibrio cholerae V51]
 gi|125620572|gb|EAZ48938.1| peptide chain release factor 1 [Vibrio cholerae V51]
          Length = 362

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPDDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIDPVIHEHQADQLAALA 359


>gi|425065343|ref|ZP_18468463.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
           gallicida P1059]
 gi|404384207|gb|EJZ80650.1| Peptide chain release factor 1 [Pasteurella multocida subsp.
           gallicida P1059]
          Length = 360

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D  M +MA EE+     E ++++  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K WK EV+   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL +++ + E+ R   +++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|188526883|ref|YP_001909570.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
 gi|238691882|sp|B2URQ8.1|RF1_HELPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|188143123|gb|ACD47540.1| peptide chain release factor 1 [Helicobacter pylori Shi470]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 208/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V + + DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINSSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|386750513|ref|YP_006223733.1| peptide chain release factor 1 [Helicobacter pylori Shi417]
 gi|384556771|gb|AFH97239.1| peptide chain release factor 1 [Helicobacter pylori Shi417]
          Length = 352

 Score =  308 bits (789), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 208/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V + + DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINSSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|208434043|ref|YP_002265709.1| peptide chain release factor 1 [Helicobacter pylori G27]
 gi|238058715|sp|B5Z680.1|RF1_HELPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|208431972|gb|ACI26843.1| peptide chain release factor RF-1 [Helicobacter pylori G27]
          Length = 352

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420406208|ref|ZP_14905379.1| peptide chain release factor 1 [Helicobacter pylori CPY6311]
 gi|393024229|gb|EJB25340.1| peptide chain release factor 1 [Helicobacter pylori CPY6311]
          Length = 352

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|289163904|ref|YP_003454042.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
 gi|288857077|emb|CBJ10892.1| peptide chain release factor 1 [Legionella longbeachae NSW150]
          Length = 362

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 210/291 (72%), Gaps = 2/291 (0%)

Query: 24  CSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
             EDK++  MA EEL  A  + + L   L   L+PKD  DER+  LE+RAGTGG+EA++F
Sbjct: 70  AGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIF 129

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+++MY RY++++GW+ E++  +  +  GYKE    ISG  VY +LKFESG HRVQRV
Sbjct: 130 AGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRV 189

Query: 144 PLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GRVHTSA +VAILP+ DE+ D+++  +DLRIDTYRS G+GGQH N T+SA+R+T
Sbjct: 190 PETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRIT 249

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+ +  QDERSQH N++KA+ +L  +L + E+S+    +++ R   +G+GDRSERI
Sbjct: 250 HIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLVGTGDRSERI 309

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQGR+TDHR+ +T + ++D+MEG+ L + ++ L  +   + +A  G
Sbjct: 310 RTYNYPQGRLTDHRINLTIYQLNDVMEGK-LSLVVEPLKREYHAELLAELG 359


>gi|121997785|ref|YP_001002572.1| peptide chain release factor 1 [Halorhodospira halophila SL1]
 gi|166223563|sp|A1WVQ8.1|RF1_HALHL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|121589190|gb|ABM61770.1| bacterial peptide chain release factor 1 (bRF-1) [Halorhodospira
           halophila SL1]
          Length = 363

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 205/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++  +A +EL  A    + L+  L + L+P D  D+R+  LEVRAG GG+EA+LFA D
Sbjct: 73  DAEIRALAEQELAEAQRRLEELEGALQRHLVPTDPNDQRNIFLEVRAGAGGDEAALFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY++++GWK E++   E +  GY+E  A +SG  VY +LKFESG HRVQRVP T
Sbjct: 133 LLRMYMRYAERQGWKTEILSAREGEHGGYREVIARVSGRSVYARLKFESGAHRVQRVPAT 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VAILP+ DEV  + +   DLR+DT+RS G+GGQH NTT+SA+R+TH+P
Sbjct: 193 ESQGRIHTSACTVAILPELDEVSAIEVNTADLRVDTFRSSGAGGQHVNTTDSAIRITHLP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           +G+ +  QDERSQ+ N+AKA+ +L A+L E ER++    RS+ R   +GSGDRSERIRTY
Sbjct: 253 SGLVVECQDERSQNKNRAKAIALLQARLTEQERAKQQSERSEQRRLAVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGRVTDHR+G+T + +  +MEG  +D  +D L  + + +A+A   
Sbjct: 313 NFPQGRVTDHRIGLTLYKLEQVMEG-GMDELLDGLTQEHQAEALAEIA 359


>gi|421714241|ref|ZP_16153562.1| peptide chain release factor 1 [Helicobacter pylori R036d]
 gi|421716135|ref|ZP_16155447.1| peptide chain release factor 1 [Helicobacter pylori R037c]
 gi|421717631|ref|ZP_16156933.1| peptide chain release factor 1 [Helicobacter pylori R038b]
 gi|407217926|gb|EKE87755.1| peptide chain release factor 1 [Helicobacter pylori R036d]
 gi|407222033|gb|EKE91836.1| peptide chain release factor 1 [Helicobacter pylori R037c]
 gi|407223138|gb|EKE92931.1| peptide chain release factor 1 [Helicobacter pylori R038b]
          Length = 352

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420434965|ref|ZP_14933965.1| peptide chain release factor 1 [Helicobacter pylori Hp H-27]
 gi|420505507|ref|ZP_15004023.1| peptide chain release factor 1 [Helicobacter pylori Hp P-74]
 gi|393052733|gb|EJB53679.1| peptide chain release factor 1 [Helicobacter pylori Hp H-27]
 gi|393117039|gb|EJC17543.1| peptide chain release factor 1 [Helicobacter pylori Hp P-74]
          Length = 352

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|336123568|ref|YP_004565616.1| peptide Chain Release factor [Vibrio anguillarum 775]
 gi|335341291|gb|AEH32574.1| Bacterial Peptide Chain Release Factor [Vibrio anguillarum 775]
          Length = 362

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           ED +M +MA EE+ +A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  EDAEMREMAQEEIKIAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++K  W+ E++  + ++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAEKMSWRIEIMSASYAEHGGYKEVIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAI+P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E ++     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIAQAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPIIQEYQADQLAALA 359


>gi|420402818|ref|ZP_14902006.1| peptide chain release factor 1 [Helicobacter pylori CPY6081]
 gi|393016285|gb|EJB17445.1| peptide chain release factor 1 [Helicobacter pylori CPY6081]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|207091639|ref|ZP_03239426.1| peptide chain release factor 1 [Helicobacter pylori HPKX_438_AG0C1]
 gi|419418273|ref|ZP_13958616.1| peptide chain release factor 1 [Helicobacter pylori NCTC 11637 =
           CCUG 17874]
 gi|384374462|gb|EIE29854.1| peptide chain release factor 1 [Helicobacter pylori NCTC 11637 =
           CCUG 17874]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420503640|ref|ZP_15002170.1| peptide chain release factor 1 [Helicobacter pylori Hp P-62]
 gi|393155029|gb|EJC55306.1| peptide chain release factor 1 [Helicobacter pylori Hp P-62]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420411081|ref|ZP_14910217.1| peptide chain release factor 1 [Helicobacter pylori NQ4200]
 gi|393026294|gb|EJB27394.1| peptide chain release factor 1 [Helicobacter pylori NQ4200]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|385219943|ref|YP_005781415.1| peptide chain release factor 1 [Helicobacter pylori India7]
 gi|317008750|gb|ADU79330.1| peptide chain release factor 1 [Helicobacter pylori India7]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420457948|ref|ZP_14956758.1| peptide chain release factor 1 [Helicobacter pylori Hp A-26]
 gi|393075469|gb|EJB76223.1| peptide chain release factor 1 [Helicobacter pylori Hp A-26]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNVYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420412943|ref|ZP_14912068.1| peptide chain release factor 1 [Helicobacter pylori NQ4099]
 gi|393030704|gb|EJB31782.1| peptide chain release factor 1 [Helicobacter pylori NQ4099]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/279 (51%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK EVV  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|83951817|ref|ZP_00960549.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
 gi|83836823|gb|EAP76120.1| peptide chain release factor 1 [Roseovarius nubinhibens ISM]
          Length = 349

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/303 (49%), Positives = 219/303 (72%), Gaps = 10/303 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEEL-CLAIDEEKRLQSLLLKSLL 57
           +ELR   +EI   ++ +    +      D +M ++A +EL  L  +   R ++L L +LL
Sbjct: 36  AELRPVVEEIRAYRAALDAAEQAEAMLGDPEMRELAEDELRTLKAELPGREKALQL-ALL 94

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD+AD R  I+E+R GTGGEEA+LFA D+ +MY RY++ +GW+FEV+   +++L G KE
Sbjct: 95  PKDEADARPAIIEIRPGTGGEEAALFAGDLLRMYARYAEARGWQFEVIEEAQTELGGIKE 154

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
           A   + G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +   D+
Sbjct: 155 AVVHVKGAHVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIHIDPSDI 214

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDT R+ G+GGQH NTT+SAVR+THIP+G+ ++   E+SQH N+  A++VL  +LY++E
Sbjct: 215 RIDTMRASGAGGQHVNTTDSAVRITHIPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLE 273

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R ++H +RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M G +LD  I
Sbjct: 274 RQKVHDARSADRAAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDQVMAG-DLDDII 332

Query: 298 DAL 300
           DAL
Sbjct: 333 DAL 335


>gi|420411425|ref|ZP_14910557.1| peptide chain release factor 1 [Helicobacter pylori NQ4228]
 gi|393030214|gb|EJB31293.1| peptide chain release factor 1 [Helicobacter pylori NQ4228]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  ID L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVIDPLI 344


>gi|15644707|ref|NP_206877.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|383749136|ref|YP_005424239.1| peptide chain release factor 1 [Helicobacter pylori ELS37]
 gi|410023311|ref|YP_006892564.1| peptide chain release factor 1 [Helicobacter pylori Rif1]
 gi|410501080|ref|YP_006935607.1| peptide chain release factor 1 [Helicobacter pylori Rif2]
 gi|410681597|ref|YP_006933999.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|419416126|ref|ZP_13956709.1| peptide chain release factor 1 [Helicobacter pylori P79]
 gi|2500136|sp|P55998.1|RF1_HELPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|2313158|gb|AAD07148.1| peptide chain release factor RF-1 (prfA) [Helicobacter pylori
           26695]
 gi|380873882|gb|AFF19663.1| peptide chain release factor 1 [Helicobacter pylori ELS37]
 gi|384375651|gb|EIE30920.1| peptide chain release factor 1 [Helicobacter pylori P79]
 gi|409893238|gb|AFV41296.1| peptide chain release factor 1 [Helicobacter pylori 26695]
 gi|409894968|gb|AFV42890.1| peptide chain release factor 1 [Helicobacter pylori Rif1]
 gi|409896631|gb|AFV44485.1| peptide chain release factor 1 [Helicobacter pylori Rif2]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|262274708|ref|ZP_06052519.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
 gi|262221271|gb|EEY72585.1| peptide chain release factor 1 [Grimontia hollisae CIP 101886]
          Length = 362

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 205/289 (70%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A ++ +RL   L   LLPKD  DER+C LE+RAG GG+EA++FA 
Sbjct: 72  DDPEMREMAQEEVKAAKEDIERLTDELQVLLLPKDPNDERNCFLEIRAGAGGDEAAIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++ KGW+ EV+     +  GYKE  A ++G G YG +KFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAESKGWRVEVINANHGEHGGYKEMIAKVNGDGAYGVMKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAILP+  E ++  +   DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAILPEIPEAEIPEINPADLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A+L + E  +    ++  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARLIKAEEEKRAAEQASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + + ++MEG +LD  I  ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLDEVMEG-DLDSLIQPIIHEFQADQLAALA 359


>gi|378579405|ref|ZP_09828072.1| peptide chain release factor RF-1 [Pantoea stewartii subsp.
           stewartii DC283]
 gi|377817879|gb|EHU00968.1| peptide chain release factor RF-1 [Pantoea stewartii subsp.
           stewartii DC283]
          Length = 360

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 154/309 (49%), Positives = 217/309 (70%), Gaps = 6/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           + +  Q +I+  K L+    +D +M DMA EEL  A ++   L+  L   LLPKD  DER
Sbjct: 54  DWQQNQDDIETAKMLL----DDPEMRDMAQEELQAAREKTDALEQQLQLLLLPKDPDDER 109

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           DC +EVRAGTGG+EA++FA D+F+MY RY++ + W+ E+V   + +  GYKE  A I G 
Sbjct: 110 DCFVEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIVSANDGEHGGYKEVIARIMGD 169

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRS 184
           G YG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DL+IDT+RS
Sbjct: 170 GAYGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRS 229

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++ H +
Sbjct: 230 SGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHEA 289

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRS+RIRTYNFPQGRVTDHR+ +T + + + MEG+ LD  I+ ++ + 
Sbjct: 290 EASTRRNLLGSGDRSDRIRTYNFPQGRVTDHRINLTLYRLDETMEGK-LDSLIEPIVQEY 348

Query: 305 EMDAIASFG 313
           + D +A+  
Sbjct: 349 QADQLAALA 357


>gi|262404524|ref|ZP_06081079.1| peptide chain release factor 1 [Vibrio sp. RC586]
 gi|262349556|gb|EEY98694.1| peptide chain release factor 1 [Vibrio sp. RC586]
          Length = 362

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 210/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   I+ ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIEPVIHEHQADQLAALA 359


>gi|392412307|ref|YP_006448914.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfomonile
           tiedjei DSM 6799]
 gi|390625443|gb|AFM26650.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfomonile
           tiedjei DSM 6799]
          Length = 359

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 156/306 (50%), Positives = 217/306 (70%), Gaps = 5/306 (1%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           +EID L+++I    +D ++++MA E+L    + E  ++  +   LLPKD  D+++  LE+
Sbjct: 58  REIDDLEAIIA-AGDDPELVEMAREDLPQIKERESDVRQAINILLLPKDPNDDKNTFLEI 116

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGGEEA+LFA D+F+ Y RY++ + W+ E++  + +   G KE  A I G G Y +L
Sbjct: 117 RAGTGGEEAALFAGDLFRAYCRYAEVRNWRVELMSSSPAAAGGIKEVIALIHGSGAYSRL 176

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFE G+HRVQRVP TE  GR+HTSAV+VA+LP+AD+V++ +  +DL+ID YRS G GGQ 
Sbjct: 177 KFERGVHRVQRVPTTESQGRIHTSAVTVAVLPEADDVEIDIDPKDLKIDVYRSSGPGGQS 236

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE-MERSRIHLSRSKLRS 250
            NTT+SAVRVTH+PT + ++ QDE+SQH NKAKALK+L A+L + ME  R +   SK R 
Sbjct: 237 VNTTDSAVRVTHLPTNLVVTCQDEKSQHKNKAKALKILKARLLDRMEEER-NAQISKERK 295

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            Q+GSGDRSERIRTYNFPQ RVTDHR+G+T + +  ++EG+ LD  ID L+   +  AI 
Sbjct: 296 NQVGSGDRSERIRTYNFPQNRVTDHRIGLTLYKLDGVLEGK-LDEIIDPLIFHAQTQAIQ 354

Query: 311 SFGSTQ 316
             G TQ
Sbjct: 355 E-GFTQ 359


>gi|383310198|ref|YP_005363008.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. HN06]
 gi|380871470|gb|AFF23837.1| peptide chain release factor 1 [Pasteurella multocida subsp.
           multocida str. HN06]
          Length = 360

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D  M +MA EE+     E ++++  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPSMKEMAQEEIEACKTEIEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K WK EV+   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESKRWKVEVLSANESEQGGYKEIIVKVNGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL +++ + E+ R   +++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLASRIVQAEKERQEQAQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|291617195|ref|YP_003519937.1| PrfA [Pantoea ananatis LMG 20103]
 gi|378767534|ref|YP_005196002.1| peptide chain release factor 1 [Pantoea ananatis LMG 5342]
 gi|386015587|ref|YP_005933868.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
 gi|386079669|ref|YP_005993194.1| peptide chain release factor 1 PrfA [Pantoea ananatis PA13]
 gi|291152225|gb|ADD76809.1| PrfA [Pantoea ananatis LMG 20103]
 gi|327393650|dbj|BAK11072.1| peptide chain release factor 1 PrfA [Pantoea ananatis AJ13355]
 gi|354988850|gb|AER32974.1| peptide chain release factor 1 PrfA [Pantoea ananatis PA13]
 gi|365187015|emb|CCF09965.1| peptide chain release factor 1 [Pantoea ananatis LMG 5342]
          Length = 360

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 153/309 (49%), Positives = 217/309 (70%), Gaps = 6/309 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           + +  Q +I+  K L+    +D +M DMA EEL  A ++ + L+  L   LLPKD  DER
Sbjct: 54  DWQQNQDDIETAKMLL----DDPEMRDMAQEELLEAREKSESLEQQLQLLLLPKDPDDER 109

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           DC +EVRAGTGG+EA++FA D+F+MY RY++ + W+ E+V   E +  GYKE  A + G 
Sbjct: 110 DCFVEVRAGTGGDEAAIFAGDLFRMYSRYAESRRWRVEIVSANEGEHGGYKEVIARVMGE 169

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRS 184
           G YG+ KFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DL+IDT+RS
Sbjct: 170 GAYGRFKFESGGHRVQRVPETESQGRIHTSACTVAVMPELPEAELPEINPSDLKIDTFRS 229

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+++  E ++ H +
Sbjct: 230 SGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRHEA 289

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            +  R   +GSGDRS+RIRTYNFPQGRVTDHR+ +T + + + MEG+ LD  I+ ++ + 
Sbjct: 290 EASTRRNLLGSGDRSDRIRTYNFPQGRVTDHRINLTIYRLDETMEGK-LDSLIEPIVQEY 348

Query: 305 EMDAIASFG 313
           + D +A+  
Sbjct: 349 QADQLAALA 357


>gi|420456333|ref|ZP_14955155.1| peptide chain release factor 1 [Helicobacter pylori Hp A-16]
 gi|393076431|gb|EJB77184.1| peptide chain release factor 1 [Helicobacter pylori Hp A-16]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKNELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|346992936|ref|ZP_08861008.1| peptide chain release factor 1 [Ruegeria sp. TW15]
          Length = 351

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/302 (49%), Positives = 214/302 (70%), Gaps = 8/302 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+L+    +I   + L+ + +E      D DM ++A EE+          +  L  +LLP
Sbjct: 38  SDLKPVVDQIMSWRLLVSDLAEAEAMLADPDMKELAEEEIPELQARIPEAEHALQLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  +LE+R GTGG+EA+LFA D+ +MY+RYS+ +GW+FE++    SDL G KE 
Sbjct: 98  KDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYSEARGWQFEIIEEQASDLGGIKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I G  V+ ++K+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+++   D+R
Sbjct: 158 VAHIKGDNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQIDANDIR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDLER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  ID
Sbjct: 277 QRIDSERSADRASQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDQVMQG-DLDEVID 335

Query: 299 AL 300
           AL
Sbjct: 336 AL 337


>gi|257464821|ref|ZP_05629192.1| peptide chain release factor 1 [Actinobacillus minor 202]
 gi|257450481|gb|EEV24524.1| peptide chain release factor 1 [Actinobacillus minor 202]
          Length = 360

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E ++L+  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY++ K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ +    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|297582072|ref|ZP_06943991.1| peptide chain release factor 1 [Vibrio cholerae RC385]
 gi|297533767|gb|EFH72609.1| peptide chain release factor 1 [Vibrio cholerae RC385]
          Length = 362

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   +D ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLVDPVIHEHQADQLAALA 359


>gi|203284116|ref|YP_002221856.1| peptide chain release factor A [Borrelia duttonii Ly]
 gi|201083559|gb|ACH93150.1| peptide chain release factor A [Borrelia duttonii Ly]
          Length = 359

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 141/302 (46%), Positives = 216/302 (71%), Gaps = 9/302 (2%)

Query: 2   HLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
           H+++++   QK        I    ++ +M D+  +E+     ++  +++ +   LL +D+
Sbjct: 56  HILNQINENQK--------ILSEEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDE 107

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            D+++ I+E+RAGTGGEEA+LFA ++++MY +YS+KK WK E++   E++L G+KE S  
Sbjct: 108 NDDKNIIIEIRAGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFE 167

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           I G  V+ KLK ESG+HRVQR+P+TE +G++ TSA +VA+LP+ ++ D+ + ++DLRID 
Sbjct: 168 IKGKDVFKKLKHESGVHRVQRIPITESNGKLQTSAATVAVLPEVEDTDIEINDKDLRIDV 227

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH NTT+SAVR+TH+PTG+    Q+ERSQH NK +A+K+L A+LYE+E  + 
Sbjct: 228 YRSSGAGGQHVNTTDSAVRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKK 287

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
              RS  R +Q+GSGDRSERIRTYNFPQ RVTDHR  I+ + + ++M+GE LD  ++ L 
Sbjct: 288 QEQRSNDRKQQVGSGDRSERIRTYNFPQNRVTDHRANISLYKLEEIMQGE-LDSLLNTLA 346

Query: 302 LQ 303
           L+
Sbjct: 347 LK 348


>gi|420414576|ref|ZP_14913694.1| peptide chain release factor 1 [Helicobacter pylori NQ4053]
 gi|393034818|gb|EJB35871.1| peptide chain release factor 1 [Helicobacter pylori NQ4053]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|242371609|ref|ZP_04817183.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
 gi|242350676|gb|EES42277.1| peptide chain release factor 1 [Staphylococcus epidermidis
           M23864:W1]
          Length = 358

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 147/307 (47%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E++ ++ ++ E S DK+ ++M  EE     +E   ++  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELEDIEEMLRETS-DKEEVEMLKEESTALKNELPDMEEELKILLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEISFSVSGSGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ ++   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-VATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   +  +MEG +LD  IDAL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEG-HLDEIIDALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|242241525|ref|ZP_04795970.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|416128250|ref|ZP_11597255.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
 gi|418328423|ref|ZP_12939536.1| peptide chain release factor 1 [Staphylococcus epidermidis
           14.1.R1.SE]
 gi|418614626|ref|ZP_13177589.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU118]
 gi|418633631|ref|ZP_13196039.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU129]
 gi|420174286|ref|ZP_14680739.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM061]
 gi|420178547|ref|ZP_14684877.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM057]
 gi|420181341|ref|ZP_14687544.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM053]
 gi|420191022|ref|ZP_14696959.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM037]
 gi|420193551|ref|ZP_14699402.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM023]
 gi|420204945|ref|ZP_14710483.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM015]
 gi|242235068|gb|EES37379.1| peptide chain release factor 1 [Staphylococcus epidermidis W23144]
 gi|319399600|gb|EFV87855.1| peptide chain release factor 1 [Staphylococcus epidermidis FRI909]
 gi|365232022|gb|EHM73037.1| peptide chain release factor 1 [Staphylococcus epidermidis
           14.1.R1.SE]
 gi|374819516|gb|EHR83638.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU118]
 gi|374838969|gb|EHS02502.1| peptide chain release factor 1 [Staphylococcus epidermidis VCU129]
 gi|394245220|gb|EJD90537.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM061]
 gi|394246270|gb|EJD91531.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM057]
 gi|394246689|gb|EJD91943.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM053]
 gi|394258120|gb|EJE03012.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM037]
 gi|394259818|gb|EJE04649.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM023]
 gi|394271666|gb|EJE16155.1| peptide chain release factor 1 [Staphylococcus epidermidis
           NIHLM015]
          Length = 358

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 147/307 (47%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           +TK++E+  ++ ++ E S DK+ ++M  EE      E   ++  L   L+PKD  D++D 
Sbjct: 52  KTKKEELQDIEDMLSETS-DKEEVEMLKEESSALKTELPDMEEELKILLIPKDPNDDKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++  G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAEANGFKTEIVEASESDHGGYKEVSFSVSGTGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+A++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEAEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKLQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   ++ +MEG +LD  ++AL L ++ +
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLNQIMEG-HLDEIVEALTLSEQTE 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|385226349|ref|YP_005786273.1| peptide chain release factor 1 [Helicobacter pylori SNT49]
 gi|344331262|gb|AEN16292.1| peptide chain release factor 1 [Helicobacter pylori SNT49]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK EVV  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           +P TE  GR+HTSA+++AI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 IPETESQGRIHTSAITIAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|379796442|ref|YP_005326443.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSHR1132]
 gi|356873435|emb|CCE59774.1| peptide chain release factor 1 [Staphylococcus aureus subsp. aureus
           MSHR1132]
          Length = 358

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/307 (48%), Positives = 218/307 (71%), Gaps = 3/307 (0%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           ++K++E+  ++ L+ E +EDK+ ++M  EE      E   L+  L   L+PKD  DE+D 
Sbjct: 52  KSKKEELTDIEELLNE-TEDKEEIEMLKEESSGIKAELPNLEEELKILLIPKDPNDEKDV 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           I+E+RA  GG+EA++FA D+ +MY +Y++ +G+K E+V  +ESD  GYKE S ++SG G 
Sbjct: 111 IVEIRAAAGGDEAAIFAGDLMRMYSKYAESEGFKTEIVEASESDHGGYKEISFSVSGNGA 170

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYRS G+
Sbjct: 171 YSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYRSSGA 230

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KA+KVL A+LY+M+        + 
Sbjct: 231 GGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKAMKVLKARLYDMKVQEEQQKYAS 289

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMD 307
            R   +G+GDRSERIRTYN+PQ RVTDHR+G+T   +  +MEG +L+  IDAL L ++ D
Sbjct: 290 QRKSAVGTGDRSERIRTYNYPQSRVTDHRIGLTLQKLGQIMEG-HLEEIIDALTLSEQTD 348

Query: 308 AIASFGS 314
            +    +
Sbjct: 349 KLKELNN 355


>gi|420518867|ref|ZP_15017312.1| peptide chain release factor 1 [Helicobacter pylori Hp H-5b]
 gi|393128770|gb|EJC29210.1| peptide chain release factor 1 [Helicobacter pylori Hp H-5b]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|347542961|ref|YP_004857598.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-rat-Yit]
 gi|346985997|dbj|BAK81672.1| peptide chain release factor 1 [Candidatus Arthromitus sp.
           SFB-rat-Yit]
          Length = 357

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 153/303 (50%), Positives = 220/303 (72%), Gaps = 5/303 (1%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           ++I+  KSL+ E  EDK+  ++A EEL +  + +  +++ L   LLPKD  D ++  +E+
Sbjct: 56  EDIEYNKSLLDE--EDKEFRELAQEELKVLQNIKINIENELKILLLPKDPNDGKNVFVEI 113

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAGTGG+EA+LFA ++F+MY +Y + K WK E++ V ++D+ G+KE    I G G Y KL
Sbjct: 114 RAGTGGDEAALFASNLFRMYSKYVENKRWKIEMISVNDTDIGGFKEVVFMIKGNGAYSKL 173

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE SGR+HTSA +VA+LP+ D+VDV +   DLRID +RS G+GGQ 
Sbjct: 174 KYESGVHRVQRVPDTEASGRIHTSAATVAVLPEVDDVDVDINQNDLRIDVFRSSGNGGQS 233

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM-ERSRIHLSRSKLRS 250
            NTT+SAVR+THIP+G+ IS QDE+SQ  NK KA+K+L A+L+E+ E+ R+ L  ++ R 
Sbjct: 234 VNTTDSAVRITHIPSGIVISCQDEKSQLKNKEKAMKLLRARLFEIAEQERLKLI-AEDRK 292

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            Q+GSGDRSERIRTYN+PQGRVTDHR+G+T + +   M+G  +D  I+ L+ Q + + + 
Sbjct: 293 SQVGSGDRSERIRTYNYPQGRVTDHRIGLTIYKLDSFMDG-YIDEIIEGLITQDQSEKMK 351

Query: 311 SFG 313
             G
Sbjct: 352 QMG 354


>gi|237753220|ref|ZP_04583700.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375487|gb|EEO25578.1| peptide chain release factor 1 [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 356

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/288 (49%), Positives = 208/288 (72%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +DK++ D+A EE+     +  +L++ +   LLPKD  D+++  LE+RAGTGG+EA +F  
Sbjct: 67  DDKELGDLAKEEIKETETQNVKLEAEIKVLLLPKDPNDDKNIYLELRAGTGGDEAGIFVG 126

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+ Y RY+  KGWK E++  +E+ + GYKE  A + G G Y +LK+E G HRVQRVP 
Sbjct: 127 DLFRAYVRYADLKGWKVEIISSSENSVGGYKEIIALVKGKGAYSRLKYEGGTHRVQRVPA 186

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE  GRVHTSA++VAI+P+ D+V+V +   DLRI+ +R+GG GGQ  NTT+SAVR+THIP
Sbjct: 187 TESQGRVHTSAITVAIMPEVDDVEVVINPNDLRIEVFRAGGHGGQCVNTTDSAVRITHIP 246

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+++S+QDE+SQH NK KA+K+L A++YE E        ++ R  Q+GSGDRSERIRTY
Sbjct: 247 TGISVSMQDEKSQHKNKDKAMKILKARIYEAELEAQMEQNAEARKSQVGSGDRSERIRTY 306

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQ R+TDHRVG+T +++ ++M   NLD  ID ++   + +A+ + G
Sbjct: 307 NYPQNRLTDHRVGLTLYSLEEIMLSGNLDSVIDPIVAYFQAEALQNSG 354


>gi|420476750|ref|ZP_14975413.1| peptide chain release factor 1 [Helicobacter pylori Hp H-23]
 gi|420480088|ref|ZP_14978732.1| peptide chain release factor 1 [Helicobacter pylori Hp P-1]
 gi|420481647|ref|ZP_14980284.1| peptide chain release factor 1 [Helicobacter pylori Hp P-2]
 gi|420510532|ref|ZP_15009022.1| peptide chain release factor 1 [Helicobacter pylori Hp P-1b]
 gi|420512067|ref|ZP_15010550.1| peptide chain release factor 1 [Helicobacter pylori Hp P-2b]
 gi|393095175|gb|EJB95780.1| peptide chain release factor 1 [Helicobacter pylori Hp H-23]
 gi|393098001|gb|EJB98593.1| peptide chain release factor 1 [Helicobacter pylori Hp P-1]
 gi|393098881|gb|EJB99462.1| peptide chain release factor 1 [Helicobacter pylori Hp P-2]
 gi|393122273|gb|EJC22750.1| peptide chain release factor 1 [Helicobacter pylori Hp P-1b]
 gi|393157130|gb|EJC57391.1| peptide chain release factor 1 [Helicobacter pylori Hp P-2b]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420446379|ref|ZP_14945276.1| peptide chain release factor 1 [Helicobacter pylori Hp H-43]
 gi|393065251|gb|EJB66080.1| peptide chain release factor 1 [Helicobacter pylori Hp H-43]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|425790477|ref|YP_007018394.1| peptide chain release factor 1 [Helicobacter pylori Aklavik86]
 gi|425628792|gb|AFX89332.1| peptide chain release factor 1 [Helicobacter pylori Aklavik86]
          Length = 352

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V++ +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|302381433|ref|YP_003817256.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192061|gb|ADK99632.1| peptide chain release factor 1 [Brevundimonas subvibrioides ATCC
           15264]
          Length = 367

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/302 (49%), Positives = 217/302 (71%), Gaps = 12/302 (3%)

Query: 7   LRTKQKEIDGLKSLIYECSEDKDMLDMATEEL---CLAIDEEKRLQSLLLKSLLPKDDAD 63
           L   + EI+ L+++    + D +M  M  +EL      + E +R  +LLL    P+D  +
Sbjct: 63  LAKARTEIEELQAM----TADPEMAAMVADELETLNARLPEMERDVALLLA---PRDADE 115

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
               +LEVRAGTGG+EA+LFA D+F+MY RY+  +GWK E+   TE D  GYKE  A ++
Sbjct: 116 NASAVLEVRAGTGGDEAALFAGDLFRMYSRYASTRGWKVELDSATEGDAGGYKEIIATVT 175

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++V++ ++++D+RIDTYR
Sbjct: 176 GDGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVEDVEIDIQDKDIRIDTYR 235

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           + GSGGQH N T+SAVR+TH P+G+ ++   E+SQH+N+ KA+K L  +LY+M+R     
Sbjct: 236 ASGSGGQHVNKTDSAVRITHFPSGIVVT-SSEKSQHVNRDKAMKNLRVRLYDMQRQMKDN 294

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           +RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H++  ++EG +LD  ++AL+ +
Sbjct: 295 ARSDARKSQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHSLPQILEG-DLDALLNALIAE 353

Query: 304 QE 305
            +
Sbjct: 354 DQ 355


>gi|84686944|ref|ZP_01014828.1| peptide chain release factor 1 [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665141|gb|EAQ11621.1| peptide chain release factor 1 [Rhodobacterales bacterium HTCC2654]
          Length = 351

 Score =  308 bits (788), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 146/303 (48%), Positives = 217/303 (71%), Gaps = 8/303 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           +EL+   +EI   + L+ +  +      D +M ++A +EL    +    ++  +  +LLP
Sbjct: 38  AELKPVVEEIAAFRQLLSDIEDAEAMLSDPEMRELAEDELPGLRERLPVMEQAMRVALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           +D AD R  ++E+R GTGG+EASLFA D+ +MY+RY++ +GWKF+ +  + +++ G KE 
Sbjct: 98  RDAADARPAMVEIRPGTGGDEASLFAGDLLRMYQRYAEARGWKFDTLEQSLTEVGGVKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A +SG GV+ +LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +   D+R
Sbjct: 158 VARVSGDGVFARLKFESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIHIDPADIR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT R+ G+GGQH NTT+SAVR+THIPTG+ ++   E+SQH N+  A++VL  +L++ ER
Sbjct: 218 IDTMRASGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHRNREIAMQVLKTRLFDAER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            R H  R+  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + + D+M+G +LD  ID
Sbjct: 277 QRAHDERASARKAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLGDVMQG-DLDEVID 335

Query: 299 ALL 301
           AL+
Sbjct: 336 ALI 338


>gi|420154949|ref|ZP_14661821.1| peptide chain release factor 1 [Clostridium sp. MSTE9]
 gi|394759930|gb|EJF42579.1| peptide chain release factor 1 [Clostridium sp. MSTE9]
          Length = 360

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 143/282 (50%), Positives = 204/282 (72%), Gaps = 1/282 (0%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEE 79
           ++ E   +++M +M  +EL  A D+ +R    L   LLP+D  DER+ I+E+R G GGEE
Sbjct: 64  MLGESGLEREMKEMIQQELDDAKDQVERTAEELKILLLPRDPNDERNVIMEIRGGAGGEE 123

Query: 80  ASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHR 139
           A+LF+  +F+MY  Y+ ++GWK E++ V E++L GYKE S  I+G G Y +LK+ESG+HR
Sbjct: 124 AALFSARLFRMYSMYATRRGWKTELLNVNETELGGYKEISFQITGDGAYSRLKYESGVHR 183

Query: 140 VQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAV 199
           VQRVP TE  GR+HTS  +VA+LP+ D+V++ +   DL+IDTYR+ G+GGQH N T SA+
Sbjct: 184 VQRVPETETQGRIHTSTATVAVLPEVDDVEIEINPTDLQIDTYRASGAGGQHVNKTESAI 243

Query: 200 RVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRS 259
           R+TH+PTG  +  QDERSQ  NK KA+KVL ++LYE ++       ++ R  Q+G+GDRS
Sbjct: 244 RITHLPTGTVVECQDERSQFKNKDKAMKVLRSRLYEAKQREQDAQVAQQRKSQVGTGDRS 303

Query: 260 ERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           ERIRTYNFPQGR+TDHR+G+T + + +M+ G +LD  IDAL+
Sbjct: 304 ERIRTYNFPQGRLTDHRIGLTIYRLEEMLSG-DLDEVIDALI 344


>gi|171319081|ref|ZP_02908205.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
 gi|171095720|gb|EDT40676.1| peptide chain release factor 1 [Burkholderia ambifaria MEX-5]
          Length = 360

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 208/294 (70%), Gaps = 2/294 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +E+  A +   RL+  L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDEIRSARERMVRLEGELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G T
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEALMDG-DLDELIGALVTEHQAELLASLGDT 359


>gi|420486702|ref|ZP_14985310.1| peptide chain release factor 1 [Helicobacter pylori Hp P-8]
 gi|420520589|ref|ZP_15019020.1| peptide chain release factor 1 [Helicobacter pylori Hp P-8b]
 gi|393104255|gb|EJC04812.1| peptide chain release factor 1 [Helicobacter pylori Hp P-8]
 gi|393127176|gb|EJC27621.1| peptide chain release factor 1 [Helicobacter pylori Hp P-8b]
          Length = 352

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420431656|ref|ZP_14930675.1| peptide chain release factor 1 [Helicobacter pylori Hp H-16]
 gi|420478528|ref|ZP_14977181.1| peptide chain release factor 1 [Helicobacter pylori Hp H-34]
 gi|393049249|gb|EJB50215.1| peptide chain release factor 1 [Helicobacter pylori Hp H-16]
 gi|393097302|gb|EJB97896.1| peptide chain release factor 1 [Helicobacter pylori Hp H-34]
          Length = 352

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|366163504|ref|ZP_09463259.1| peptide chain release factor 1 [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 145/287 (50%), Positives = 210/287 (73%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           DKD  +M   EL  A +  ++++  L   LLPKD  DE+D I+E+R G GGEEA+LFA  
Sbjct: 70  DKDFREMVEMELKEAEEGLEKIKKELKILLLPKDPNDEKDVIVEIRGGAGGEEAALFAGV 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+++ GWK E++    +++ G+KE   AI G G + KLKFESG+HRVQR+P T
Sbjct: 130 LFRMYTRYAERCGWKTEMLDSNPTEIGGFKEVVFAIEGNGAFSKLKFESGVHRVQRIPET 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E +GR+HTS V+VA+LP+ +EVDV +   DLRIDTYR+ G+GGQH N T+SA+R+THIPT
Sbjct: 190 EANGRIHTSTVTVAVLPEVEEVDVDINPNDLRIDTYRASGAGGQHINKTDSAIRITHIPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QD+RSQ+ NK KA++VL +KLYE+ + + +   ++ R  Q+G+GDRSERIRTYN
Sbjct: 250 GLVVCCQDQRSQYKNKDKAMRVLRSKLYEIAQEQQNSEIAQARKGQVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           +PQGR+TDHR+G+T + +  ++EG ++D  IDAL+   + + + S G
Sbjct: 310 YPQGRMTDHRIGLTLYKLESILEG-DMDEVIDALITTDQAERLGSGG 355


>gi|385218343|ref|YP_005779818.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24]
 gi|317013501|gb|ADU80937.1| peptide chain release factor 1 [Helicobacter pylori Gambia94/24]
          Length = 352

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|350530483|ref|ZP_08909424.1| peptide chain release factor 1 [Vibrio rotiferianus DAT722]
          Length = 362

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID +L + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVLQEHQADQLAALA 359


>gi|420483345|ref|ZP_14981975.1| peptide chain release factor 1 [Helicobacter pylori Hp P-3]
 gi|420513696|ref|ZP_15012169.1| peptide chain release factor 1 [Helicobacter pylori Hp P-3b]
 gi|393102570|gb|EJC03134.1| peptide chain release factor 1 [Helicobacter pylori Hp P-3]
 gi|393158159|gb|EJC58419.1| peptide chain release factor 1 [Helicobacter pylori Hp P-3b]
          Length = 352

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420461366|ref|ZP_14960157.1| peptide chain release factor 1 [Helicobacter pylori Hp H-3]
 gi|393081882|gb|EJB82600.1| peptide chain release factor 1 [Helicobacter pylori Hp H-3]
          Length = 352

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|109948016|ref|YP_665244.1| peptide chain release factor 1 [Helicobacter acinonychis str.
           Sheeba]
 gi|122973223|sp|Q17VT1.1|RF1_HELAH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|109715237|emb|CAK00245.1| peptide chain release factor RF-1 [Helicobacter acinonychis str.
           Sheeba]
          Length = 352

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSELETTIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V++ +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEISINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|335055656|ref|YP_585342.3| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
 gi|93355984|gb|ABF10073.1| peptide chain release factor RF-1 [Cupriavidus metallidurans CH34]
          Length = 371

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M + A +E+  A +  + L++ L   LLPKD  D+R+ +LE+RAGTGGEE++LFA 
Sbjct: 81  DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFAA 140

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY++++ W+ E++  + SDL GYKE    I+G   + +LKFESG HRVQRVP 
Sbjct: 141 DLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVPA 200

Query: 146 TEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADEV +V +   DLR+DT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 201 TESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTHL 260

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QD+RSQH NK KA+KVL A++ +M+        +  R   IGSGDRS+RIRT
Sbjct: 261 PTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRNLIGSGDRSDRIRT 320

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + I  +M+G +LD  I AL  + + D +A+ G
Sbjct: 321 YNFPQGRVTDHRINLTLYKIDMIMDG-DLDELISALSAEHQADQLAALG 368


>gi|390933445|ref|YP_006390950.1| Peptide chain release factor 1 [Thermoanaerobacterium
           saccharolyticum JW/SL-YS485]
 gi|389568946|gb|AFK85351.1| Peptide chain release factor 1 [Thermoanaerobacterium
           saccharolyticum JW/SL-YS485]
          Length = 353

 Score =  307 bits (787), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 155/311 (49%), Positives = 219/311 (70%), Gaps = 1/311 (0%)

Query: 2   HLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
            ++ + R  +K  D ++S       D ++ DMA EEL    ++E+ L + +   LLPKD 
Sbjct: 43  EIVQKYREYKKVKDDIESTKELIETDDELKDMAEEELKSLEEKEESLLNEIKLLLLPKDP 102

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            DE+D I+E+RAG GGEEA+LFA D+F+MY  Y++KK WK+E++    ++L G+KE   +
Sbjct: 103 NDEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKEVIFS 162

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           I+G G Y +LKFESG+HRVQR+P TE  GR+HTS  +VA+LP+ ++VD+ +   D++ID 
Sbjct: 163 IAGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDIKIDV 222

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           +RSGG GGQ  NTT+SAVR+THIPTG+ IS QDERSQ  N+ +A+K+L AKLYEM R   
Sbjct: 223 FRSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMAREEK 282

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
               S  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + +  +++G +LD  IDALL
Sbjct: 283 EREISMTRKLQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDG-DLDEIIDALL 341

Query: 302 LQQEMDAIASF 312
            + + + + S 
Sbjct: 342 AEDQAERLESM 352


>gi|421713596|ref|ZP_16152927.1| peptide chain release factor 1 [Helicobacter pylori R32b]
 gi|407216962|gb|EKE86799.1| peptide chain release factor 1 [Helicobacter pylori R32b]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420422962|ref|ZP_14922036.1| peptide chain release factor 1 [Helicobacter pylori Hp A-4]
 gi|393042913|gb|EJB43918.1| peptide chain release factor 1 [Helicobacter pylori Hp A-4]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|374702493|ref|ZP_09709363.1| peptide chain release factor 1 [Pseudomonas sp. S9]
          Length = 360

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 144/268 (53%), Positives = 198/268 (73%), Gaps = 2/268 (0%)

Query: 47  RLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVG 106
           +L++ L + LLPKD  D+R+  LEVRAGTGG+EA++F+ D+F+MY RY++++GW+ E++ 
Sbjct: 93  KLEADLQRMLLPKDPNDDRNVFLEVRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILS 152

Query: 107 VTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQAD 166
            +E +  GYKE  A I G  VY KLKFESG HRVQRVP TE  GRVHTSA +VA+LP+ D
Sbjct: 153 ASEGEHGGYKEVIARIEGDNVYSKLKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPD 212

Query: 167 E-VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKA 225
           E  ++ +   DLR+DTYRS G+GGQH NTT+SA+R+THIPTG  +  Q+ERSQH N+AKA
Sbjct: 213 EQAEININPADLRVDTYRSSGAGGQHVNTTDSAIRITHIPTGTVVECQEERSQHKNRAKA 272

Query: 226 LKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAIS 285
           +  L AKL + + +  H   S  R   +GSGDRSERIRTYNFPQGRVTDHR+ +T ++++
Sbjct: 273 MAWLGAKLKDQQDAAAHKEISDTRKLLVGSGDRSERIRTYNFPQGRVTDHRINLTLYSLA 332

Query: 286 DMMEGENLDIFIDALLLQQEMDAIASFG 313
           ++M G  +D  I+ LL + + D +A+ G
Sbjct: 333 EVMSG-GVDAVIEPLLAEYQADQLAALG 359


>gi|330811719|ref|YP_004356181.1| peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|378952822|ref|YP_005210310.1| peptide chain release factor 1 [Pseudomonas fluorescens F113]
 gi|423699274|ref|ZP_17673764.1| peptide chain release factor 1 [Pseudomonas fluorescens Q8r1-96]
 gi|327379827|gb|AEA71177.1| Peptide chain release factor 1 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|359762836|gb|AEV64915.1| Peptide chain release factor 1 [Pseudomonas fluorescens F113]
 gi|387996495|gb|EIK57825.1| peptide chain release factor 1 [Pseudomonas fluorescens Q8r1-96]
          Length = 360

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 149/304 (49%), Positives = 216/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A D+   L+S L + LLPKD  D R+  LE
Sbjct: 59  QGDLEGAQALLKDS--DPDMREMAVEEVREAKDQLVELESSLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|225027777|ref|ZP_03716969.1| hypothetical protein EUBHAL_02036 [Eubacterium hallii DSM 3353]
 gi|224954923|gb|EEG36132.1| peptide chain release factor 1 [Eubacterium hallii DSM 3353]
          Length = 359

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 137/245 (55%), Positives = 193/245 (78%), Gaps = 1/245 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD  D+++ I+E+RAG GG+EA+LFA ++++MY+ Y++ K WK E + V E+ + G+
Sbjct: 99  LLPKDPNDDKNVIVEIRAGAGGDEAALFAAEIYRMYKNYAESKRWKTEFIDVNENGIGGF 158

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE S  I+G G Y +LK+ESG+HRVQR+P TE  GR+HTS ++VAI+P+A+EVDV+L   
Sbjct: 159 KEVSFMINGQGAYSRLKYESGVHRVQRIPATESGGRIHTSTITVAIMPEAEEVDVQLDMN 218

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D R D +R+ G+GGQ  NTT+SAVR+THIPTG+ IS QDE+SQ  NK KA+KVL A+LY+
Sbjct: 219 DCRFDVFRASGNGGQCVNTTDSAVRLTHIPTGIVISCQDEKSQLKNKDKAIKVLRARLYD 278

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           +E+S+ H + ++LR  QIG+GDR+E+IRTYNFPQGRVTDHR+ +T H + D++ G +LD 
Sbjct: 279 LEQSKAHDAEAELRKSQIGTGDRAEKIRTYNFPQGRVTDHRIKLTLHRLDDILNG-DLDE 337

Query: 296 FIDAL 300
            ID+L
Sbjct: 338 IIDSL 342


>gi|421720741|ref|ZP_16160021.1| peptide chain release factor 1 [Helicobacter pylori R046Wa]
 gi|407219333|gb|EKE89150.1| peptide chain release factor 1 [Helicobacter pylori R046Wa]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|270157830|ref|ZP_06186487.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
 gi|269989855|gb|EEZ96109.1| peptide chain release factor 1 [Legionella longbeachae D-4968]
          Length = 351

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 210/291 (72%), Gaps = 2/291 (0%)

Query: 24  CSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
             EDK++  MA EEL  A  + + L   L   L+PKD  DER+  LE+RAGTGG+EA++F
Sbjct: 59  AGEDKELAAMADEELASAKRQVEELDEQLQWHLIPKDPDDERNIYLEIRAGTGGDEAAIF 118

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+++MY RY++++GW+ E++  +  +  GYKE    ISG  VY +LKFESG HRVQRV
Sbjct: 119 AGDLYRMYIRYAEEQGWQQELISASHGEHGGYKEIITRISGNAVYSQLKFESGAHRVQRV 178

Query: 144 PLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GRVHTSA +VAILP+ DE+ D+++  +DLRIDTYRS G+GGQH N T+SA+R+T
Sbjct: 179 PETESQGRVHTSACTVAILPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRIT 238

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+ +  QDERSQH N++KA+ +L  +L + E+S+    +++ R   +G+GDRSERI
Sbjct: 239 HIPTGVVVECQDERSQHKNRSKAMSLLKTRLLDAEQSKQRKEQAQTRKSLVGTGDRSERI 298

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQGR+TDHR+ +T + ++D+MEG+ L + ++ L  +   + +A  G
Sbjct: 299 RTYNYPQGRLTDHRINLTIYQLNDVMEGK-LSLVVEPLKREYHAELLAELG 348


>gi|429765265|ref|ZP_19297565.1| peptide chain release factor 1 [Clostridium celatum DSM 1785]
 gi|429186715|gb|EKY27651.1| peptide chain release factor 1 [Clostridium celatum DSM 1785]
          Length = 361

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 146/316 (46%), Positives = 223/316 (70%), Gaps = 5/316 (1%)

Query: 3   LISELRTKQKEIDGL---KSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           +++  R  +K ++ L   K ++ E S DK+M +M +EE+ +  ++E+ L++ +   LLPK
Sbjct: 45  IVTAYREYKKVVEDLEANKEMLEEES-DKEMREMLSEEISMLKEQEEELENKIQILLLPK 103

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D  D+++  +E+R G GG+EA+LFA ++F+MY RY++ + W  E++   E+DL G+KE  
Sbjct: 104 DPNDDKNVFVEIRGGAGGDEAALFAANLFRMYTRYAESQRWSVEMMSSNENDLGGFKEVV 163

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
             I G G Y KLK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+ D+V++ + ++DLRI
Sbjct: 164 FMIKGNGAYSKLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVEIEINDKDLRI 223

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           D YRS G+GGQ  NTT+SAVR+THIPTG  ++ QDE+SQ  NK KA+KVL A+LYE   +
Sbjct: 224 DVYRSSGNGGQCVNTTDSAVRITHIPTGTVVACQDEKSQLKNKEKAMKVLRARLYEAAEA 283

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
                 ++ R  Q+G+GDRSERIRTYN+PQGR+TDHR+G+T + +   M G +++  I+A
Sbjct: 284 ERMAGIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLDSFMNG-DIEEVINA 342

Query: 300 LLLQQEMDAIASFGST 315
           L+   + + + + G+T
Sbjct: 343 LITADQAEKMKAMGNT 358


>gi|421711082|ref|ZP_16150426.1| peptide chain release factor 1 [Helicobacter pylori R030b]
 gi|407213287|gb|EKE83145.1| peptide chain release factor 1 [Helicobacter pylori R030b]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420485110|ref|ZP_14983728.1| peptide chain release factor 1 [Helicobacter pylori Hp P-4]
 gi|420515601|ref|ZP_15014064.1| peptide chain release factor 1 [Helicobacter pylori Hp P-4c]
 gi|420517302|ref|ZP_15015757.1| peptide chain release factor 1 [Helicobacter pylori Hp P-4d]
 gi|393103245|gb|EJC03808.1| peptide chain release factor 1 [Helicobacter pylori Hp P-4]
 gi|393123900|gb|EJC24368.1| peptide chain release factor 1 [Helicobacter pylori Hp P-4c]
 gi|393125116|gb|EJC25582.1| peptide chain release factor 1 [Helicobacter pylori Hp P-4d]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420468129|ref|ZP_14966874.1| peptide chain release factor 1 [Helicobacter pylori Hp H-10]
 gi|393088671|gb|EJB89317.1| peptide chain release factor 1 [Helicobacter pylori Hp H-10]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420441437|ref|ZP_14940383.1| peptide chain release factor 1 [Helicobacter pylori Hp H-36]
 gi|393060498|gb|EJB61370.1| peptide chain release factor 1 [Helicobacter pylori Hp H-36]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420439760|ref|ZP_14938720.1| peptide chain release factor 1 [Helicobacter pylori Hp H-30]
 gi|393057786|gb|EJB58682.1| peptide chain release factor 1 [Helicobacter pylori Hp H-30]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|333898002|ref|YP_004471876.1| peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|333113267|gb|AEF18204.1| Peptide chain release factor 1 [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 353

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 140/255 (54%), Positives = 191/255 (74%), Gaps = 1/255 (0%)

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE+D I+E+RAG GGEEA+LFA D+F+MY  Y++KK WK+E++    ++L G+KE
Sbjct: 99  PKDPNDEKDVIMEIRAGAGGEEAALFAYDLFRMYTMYAEKKRWKYEIMSSNATELGGFKE 158

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
              +I+G G Y +LKFESG+HRVQR+P TE  GR+HTS  +VA+LP+ ++VD+ +   D+
Sbjct: 159 VIFSIAGKGAYSRLKFESGVHRVQRIPTTEAGGRIHTSTATVAVLPEVEDVDIEINPNDI 218

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           +ID +RSGG GGQ  NTT+SAVR+THIPTG+ IS QDERSQ  N+ +A+K+L AKLYEM 
Sbjct: 219 KIDVFRSGGHGGQSVNTTDSAVRLTHIPTGIVISCQDERSQLQNRERAMKILRAKLYEMA 278

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R       S  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T + +  +++G +LD  I
Sbjct: 279 REEKEREISMTRKLQVGTGDRSERIRTYNFPQGRVTDHRIGLTLYKLQMVLDG-DLDEII 337

Query: 298 DALLLQQEMDAIASF 312
           DALL + + + + S 
Sbjct: 338 DALLAEDQAERLESM 352


>gi|384892075|ref|YP_005766168.1| peptide chain release factor 1 [Helicobacter pylori Cuz20]
 gi|308061372|gb|ADO03260.1| peptide chain release factor 1 [Helicobacter pylori Cuz20]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|421709474|ref|ZP_16148834.1| peptide chain release factor 1 [Helicobacter pylori R018c]
 gi|421722728|ref|ZP_16161987.1| peptide chain release factor 1 [Helicobacter pylori R056a]
 gi|407212031|gb|EKE81896.1| peptide chain release factor 1 [Helicobacter pylori R018c]
 gi|407226512|gb|EKE96278.1| peptide chain release factor 1 [Helicobacter pylori R056a]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|388455454|ref|ZP_10137749.1| peptide chain release factor 1 [Fluoribacter dumoffii Tex-KL]
          Length = 362

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +DK++  MA EEL  A  +   L   L   L+PKD  DER+  LE+RAGTGG+EA++F+ 
Sbjct: 72  DDKELASMAAEELEGAQKQLDELDEQLQWHLIPKDPDDERNVYLEIRAGTGGDEAAIFSG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + +GW+ E++  +  +  GYKE    ISG  VY +LKFESG HRVQRVP 
Sbjct: 132 DLYRMYSRYVEDQGWQQELISASHGEHGGYKEIIVRISGQAVYSQLKFESGAHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAI+P+ DE+D +++  +DLRIDTYRS G+GGQH N T+SA+R+THI
Sbjct: 192 TESQGRVHTSACTVAIMPEVDEIDDIQINPDDLRIDTYRSSGAGGQHVNKTDSAIRITHI 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH N+AKA+ +L  +L + E+S+    +++ R   +GSGDRSERIRT
Sbjct: 252 PTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQAQTRKSLVGSGDRSERIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGR+TDHR+ +T + ++D+MEG NL + I+ L  +   + +A  G
Sbjct: 312 YNYPQGRLTDHRINLTIYQLNDVMEG-NLGLVIEPLKREYHAELLAELG 359


>gi|384893686|ref|YP_005767735.1| peptide chain release factor 1 [Helicobacter pylori Sat464]
 gi|308062940|gb|ADO04827.1| peptide chain release factor 1 [Helicobacter pylori Sat464]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420471558|ref|ZP_14970256.1| peptide chain release factor 1 [Helicobacter pylori Hp H-18]
 gi|393092022|gb|EJB92648.1| peptide chain release factor 1 [Helicobacter pylori Hp H-18]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420451410|ref|ZP_14950262.1| peptide chain release factor 1 [Helicobacter pylori Hp A-6]
 gi|393070268|gb|EJB71058.1| peptide chain release factor 1 [Helicobacter pylori Hp A-6]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420488281|ref|ZP_14986881.1| peptide chain release factor 1 [Helicobacter pylori Hp P-11]
 gi|393108852|gb|EJC09384.1| peptide chain release factor 1 [Helicobacter pylori Hp P-11]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|254451602|ref|ZP_05065039.1| peptide chain release factor 1 [Octadecabacter arcticus 238]
 gi|198266008|gb|EDY90278.1| peptide chain release factor 1 [Octadecabacter arcticus 238]
          Length = 344

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 225/314 (71%), Gaps = 9/314 (2%)

Query: 3   LISELRTKQ---KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
           ++  +RT Q    EI+G ++++     D +M ++A  EL     +    ++ +  +L+PK
Sbjct: 36  VVEVVRTYQDLTAEIEGAEAML----SDPEMKELAEMELPQLRQQLPAAEAAVKLALIPK 91

Query: 60  DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
           D AD +  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GW FE++  ++S+L G KE +
Sbjct: 92  DAADGKPALLEIRPGTGGDEAALFAADLLRMYQRYAENRGWTFEILEESQSELGGIKEVT 151

Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
           A I+G  V+ ++K+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+++   D+RI
Sbjct: 152 ARIAGNNVFARMKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQINANDIRI 211

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT R+ GSGGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+  A++VL  +LY+ ER 
Sbjct: 212 DTMRASGSGGQHVNTTDSAVRITHMPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDAERQ 270

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           ++H  RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +++G +LD  ID 
Sbjct: 271 KVHDERSADRAAQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAVLQG-DLDEVIDG 329

Query: 300 LLLQQEMDAIASFG 313
           L+   +  A+A  G
Sbjct: 330 LIQDAQASALAEMG 343


>gi|90581727|ref|ZP_01237514.1| peptide chain release factor 1 [Photobacterium angustum S14]
 gi|90437081|gb|EAS62285.1| peptide chain release factor 1 [Vibrio angustum S14]
          Length = 362

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 144/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL   L   L+PKD  D+R+C +E+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++ +GW+ E++    S+  GYKE  A ++G GVYG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAESRGWRIEIINENRSEQGGYKEMIAKVNGDGVYGILKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA+LP+  E ++   N  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVLPEIPEAEIPEINAGDLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + H   +  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRV+DHR+ +T + ++++MEG +LD  I  +  + + D +A+ 
Sbjct: 312 YNYPQGRVSDHRITLTLYRLNEVMEG-DLDALIQPVFTEYQADQLAAM 358


>gi|420502046|ref|ZP_15000587.1| peptide chain release factor 1 [Helicobacter pylori Hp P-41]
 gi|393153326|gb|EJC53619.1| peptide chain release factor 1 [Helicobacter pylori Hp P-41]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420408067|ref|ZP_14907226.1| peptide chain release factor 1 [Helicobacter pylori NQ4216]
 gi|393025552|gb|EJB26658.1| peptide chain release factor 1 [Helicobacter pylori NQ4216]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|425433306|ref|ZP_18813843.1| peptide chain release factor 1 [Helicobacter pylori GAM100Ai]
 gi|410714191|gb|EKQ71672.1| peptide chain release factor 1 [Helicobacter pylori GAM100Ai]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420496957|ref|ZP_14995518.1| peptide chain release factor 1 [Helicobacter pylori Hp P-25]
 gi|420527312|ref|ZP_15025707.1| peptide chain release factor 1 [Helicobacter pylori Hp P-25c]
 gi|420529137|ref|ZP_15027525.1| peptide chain release factor 1 [Helicobacter pylori Hp P-25d]
 gi|393114654|gb|EJC15169.1| peptide chain release factor 1 [Helicobacter pylori Hp P-25]
 gi|393135279|gb|EJC35681.1| peptide chain release factor 1 [Helicobacter pylori Hp P-25c]
 gi|393138251|gb|EJC38633.1| peptide chain release factor 1 [Helicobacter pylori Hp P-25d]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420424660|ref|ZP_14923724.1| peptide chain release factor 1 [Helicobacter pylori Hp A-5]
 gi|420530596|ref|ZP_15028972.1| peptide chain release factor 1 [Helicobacter pylori Hp P-28b]
 gi|393043247|gb|EJB44251.1| peptide chain release factor 1 [Helicobacter pylori Hp A-5]
 gi|393139375|gb|EJC39753.1| peptide chain release factor 1 [Helicobacter pylori Hp P-28b]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420433258|ref|ZP_14932267.1| peptide chain release factor 1 [Helicobacter pylori Hp H-24]
 gi|420507014|ref|ZP_15005527.1| peptide chain release factor 1 [Helicobacter pylori Hp H-24b]
 gi|420508705|ref|ZP_15007207.1| peptide chain release factor 1 [Helicobacter pylori Hp H-24c]
 gi|420532450|ref|ZP_15030813.1| peptide chain release factor 1 [Helicobacter pylori Hp M1]
 gi|420534015|ref|ZP_15032366.1| peptide chain release factor 1 [Helicobacter pylori Hp M2]
 gi|420535820|ref|ZP_15034162.1| peptide chain release factor 1 [Helicobacter pylori Hp M3]
 gi|420537525|ref|ZP_15035855.1| peptide chain release factor 1 [Helicobacter pylori Hp M4]
 gi|420539252|ref|ZP_15037571.1| peptide chain release factor 1 [Helicobacter pylori Hp M5]
 gi|420541007|ref|ZP_15039315.1| peptide chain release factor 1 [Helicobacter pylori Hp M6]
 gi|420542404|ref|ZP_15040701.1| peptide chain release factor 1 [Helicobacter pylori Hp M9]
 gi|393052126|gb|EJB53076.1| peptide chain release factor 1 [Helicobacter pylori Hp H-24]
 gi|393119095|gb|EJC19586.1| peptide chain release factor 1 [Helicobacter pylori Hp H-24b]
 gi|393120131|gb|EJC20620.1| peptide chain release factor 1 [Helicobacter pylori Hp H-24c]
 gi|393140081|gb|EJC40454.1| peptide chain release factor 1 [Helicobacter pylori Hp M1]
 gi|393142238|gb|EJC42592.1| peptide chain release factor 1 [Helicobacter pylori Hp M2]
 gi|393143468|gb|EJC43812.1| peptide chain release factor 1 [Helicobacter pylori Hp M3]
 gi|393145080|gb|EJC45411.1| peptide chain release factor 1 [Helicobacter pylori Hp M4]
 gi|393146937|gb|EJC47262.1| peptide chain release factor 1 [Helicobacter pylori Hp M5]
 gi|393147627|gb|EJC47951.1| peptide chain release factor 1 [Helicobacter pylori Hp M6]
 gi|393160325|gb|EJC60572.1| peptide chain release factor 1 [Helicobacter pylori Hp M9]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|386753588|ref|YP_006226806.1| peptide chain release factor 1 [Helicobacter pylori Shi112]
 gi|384559846|gb|AFI00313.1| peptide chain release factor 1 [Helicobacter pylori Shi112]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|423120771|ref|ZP_17108455.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5246]
 gi|376395401|gb|EHT08047.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5246]
          Length = 360

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 153/309 (49%), Positives = 217/309 (70%), Gaps = 6/309 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           +E R  Q +I+  + ++    +D +M +MA EEL  A  + + ++  L   LLPKD  DE
Sbjct: 53  TEWRQVQDDIETAQMML----DDAEMREMAQEELRDAKAKSEEMEQQLQVLLLPKDPDDE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  GYKE  A ISG
Sbjct: 109 RNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTYR 183
            GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++   N  DLRIDT+R
Sbjct: 169 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPGDLRIDTFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E ++   
Sbjct: 229 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEIAKRQQ 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ +
Sbjct: 289 AEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQE 347

Query: 304 QEMDAIASF 312
            + D +A+ 
Sbjct: 348 YQADQLAAL 356


>gi|420490087|ref|ZP_14988673.1| peptide chain release factor 1 [Helicobacter pylori Hp P-13]
 gi|420523927|ref|ZP_15022337.1| peptide chain release factor 1 [Helicobacter pylori Hp P-13b]
 gi|393109430|gb|EJC09961.1| peptide chain release factor 1 [Helicobacter pylori Hp P-13]
 gi|393133086|gb|EJC33503.1| peptide chain release factor 1 [Helicobacter pylori Hp P-13b]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+  L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEATLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|262166266|ref|ZP_06034003.1| peptide chain release factor 1 [Vibrio mimicus VM223]
 gi|262025982|gb|EEY44650.1| peptide chain release factor 1 [Vibrio mimicus VM223]
          Length = 362

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEVPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   I+ ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIEPVIHEHQADQLAALA 359


>gi|420438109|ref|ZP_14937086.1| peptide chain release factor 1 [Helicobacter pylori Hp H-29]
 gi|393057484|gb|EJB58386.1| peptide chain release factor 1 [Helicobacter pylori Hp H-29]
          Length = 352

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|40062641|gb|AAR37562.1| peptide chain release factor 1 [uncultured marine bacterium 313]
          Length = 358

 Score =  307 bits (787), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/302 (49%), Positives = 214/302 (70%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +KE   L  +I +   DK+M+ +   EL   + +++  + +L   LLPKD+AD ++ I+E
Sbjct: 55  EKEKLELDKIIEDKKSDKEMIQLVKSELNELLKKKQSYEKILKVYLLPKDEADSKNAIVE 114

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG EA+LF  D++KMYE+    K W FE++ +++S+  G+KE    I G  +Y  
Sbjct: 115 IRAGTGGLEATLFVADLYKMYEKVCLNKKWSFEIINLSKSEAGGFKEVILLIKGANIYSF 174

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           LKFESG+HRVQRVP TE  GRVHTSA +VA+LP+A+EVDV++ ++DLRID +RS G+GGQ
Sbjct: 175 LKFESGVHRVQRVPETETQGRVHTSAATVAVLPEAEEVDVKIEDKDLRIDVFRSTGAGGQ 234

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ ++ QDE+SQH N+AK +K+L +++YE ER +    RS+ R 
Sbjct: 235 SVNTTDSAVRITHIPTGIVVTNQDEKSQHKNRAKGMKILRSRIYESEREKKEKERSRDRK 294

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
            QIG+GDRSERIRTYNFPQGRVTDHR+ +T H + + + G+  +     L +Q +   +A
Sbjct: 295 NQIGTGDRSERIRTYNFPQGRVTDHRINLTIHKLQEFLNGDAFEELGQNLRIQDQEIKLA 354

Query: 311 SF 312
           + 
Sbjct: 355 NL 356


>gi|395500681|ref|ZP_10432260.1| peptide chain release factor 1 [Pseudomonas sp. PAMC 25886]
          Length = 360

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 219/310 (70%), Gaps = 4/310 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++L   Q +++G ++L+ +   D DM +MA EE+  A D+   L+  L + LLPKD  D 
Sbjct: 53  TQLLKVQADLEGAQALLKDS--DPDMREMAVEEVREAKDKLIELEGDLQRMLLPKDPNDG 110

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G
Sbjct: 111 RNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEG 170

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYR 183
             VYGKLKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYR
Sbjct: 171 ENVYGKLKFESGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYR 230

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    
Sbjct: 231 SSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAAN 290

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL +
Sbjct: 291 AIASERKLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAE 349

Query: 304 QEMDAIASFG 313
            + D +A+ G
Sbjct: 350 YQADQLAAIG 359


>gi|386755154|ref|YP_006228371.1| peptide chain release factor 1 [Helicobacter pylori PeCan18]
 gi|384561412|gb|AFI01878.1| peptide chain release factor 1 [Helicobacter pylori PeCan18]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|384890458|ref|YP_005764591.1| peptide chain release factor 1 [Helicobacter pylori 908]
 gi|385223128|ref|YP_005783054.1| Peptide chain release factor 1 [Helicobacter pylori 2017]
 gi|385230976|ref|YP_005790895.1| Peptide chain release factor 1 [Helicobacter pylori 2018]
 gi|307636767|gb|ADN79217.1| peptide chain release factor 1 [Helicobacter pylori 908]
 gi|325995353|gb|ADZ50758.1| Peptide chain release factor 1 [Helicobacter pylori 2018]
 gi|325996950|gb|ADZ49158.1| Peptide chain release factor 1 [Helicobacter pylori 2017]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|420429732|ref|ZP_14928762.1| peptide chain release factor 1 [Helicobacter pylori Hp A-20]
 gi|393048351|gb|EJB49318.1| peptide chain release factor 1 [Helicobacter pylori Hp A-20]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|296101959|ref|YP_003612105.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|392979476|ref|YP_006478064.1| peptide chain release factor 1 [Enterobacter cloacae subsp.
           dissolvens SDM]
 gi|295056418|gb|ADF61156.1| peptide chain release factor 1 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|392325409|gb|AFM60362.1| peptide chain release factor 1 [Enterobacter cloacae subsp.
           dissolvens SDM]
          Length = 360

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 208/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A    + ++  L   LLPKD  DER+  +EVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++   E +  G+KE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIVQEYQADQLAAL 356


>gi|343518805|ref|ZP_08755793.1| peptide chain release factor 1 [Haemophilus pittmaniae HK 85]
 gi|343393384|gb|EGV05941.1| peptide chain release factor 1 [Haemophilus pittmaniae HK 85]
          Length = 361

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/298 (50%), Positives = 212/298 (71%), Gaps = 7/298 (2%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGE 78
           L+ +  E K+M +M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+
Sbjct: 68  LMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGD 123

Query: 79  EASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIH 138
           EA +FA D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG H
Sbjct: 124 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGH 183

Query: 139 RVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNS 197
           RVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+S
Sbjct: 184 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 243

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+THIPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGD
Sbjct: 244 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGD 303

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           RS++IRTYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+   +
Sbjct: 304 RSDKIRTYNYPQGRVTDHRINLTLYRLDEVMNGK-IDELIQPIITEYQADQLAALSES 360


>gi|420428090|ref|ZP_14927125.1| peptide chain release factor 1 [Helicobacter pylori Hp A-17]
 gi|420444709|ref|ZP_14943626.1| peptide chain release factor 1 [Helicobacter pylori Hp H-42]
 gi|420454265|ref|ZP_14953099.1| peptide chain release factor 1 [Helicobacter pylori Hp A-8]
 gi|393045749|gb|EJB46729.1| peptide chain release factor 1 [Helicobacter pylori Hp A-17]
 gi|393064329|gb|EJB65168.1| peptide chain release factor 1 [Helicobacter pylori Hp H-42]
 gi|393068738|gb|EJB69540.1| peptide chain release factor 1 [Helicobacter pylori Hp A-8]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|357419584|ref|YP_004932576.1| peptide chain release factor 1 [Thermovirga lienii DSM 17291]
 gi|355397050|gb|AER66479.1| peptide chain release factor 1 [Thermovirga lienii DSM 17291]
          Length = 357

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 153/297 (51%), Positives = 219/297 (73%), Gaps = 3/297 (1%)

Query: 18  KSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGG 77
           +SL++  + DK++ +MA EEL     EE+RL   L   LLPKD  D++  I+E+RAG GG
Sbjct: 64  RSLLH--ASDKELAEMAQEELRELEPEEERLTERLKVLLLPKDPNDDKSVIMEIRAGAGG 121

Query: 78  EEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGI 137
           +EA+LFA D+++MY R++++KGW  E++ + E+ + GYKE    I GVG Y +LK+ESG+
Sbjct: 122 DEAALFAGDLYRMYTRFAERKGWNTEIMTMHETGIGGYKEVVFRIDGVGAYSQLKYESGV 181

Query: 138 HRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNS 197
           HRVQRVP+TE SGR+HTS  +VA+LP+A++VDV +R EDL+IDTYR+ G+GGQH N T+S
Sbjct: 182 HRVQRVPVTESSGRIHTSTATVAVLPEAEDVDVEIREEDLKIDTYRASGAGGQHVNMTDS 241

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+TH+PTG+ ++ QDERSQ  N+AKA+K+L AKL + E  +     +  R  QIG+GD
Sbjct: 242 AVRITHLPTGIVVTCQDERSQIKNRAKAMKLLRAKLLDNEIQKQTAELAAERKGQIGTGD 301

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           RSERIRTYNFPQ RVTDHR+G+T + +  M++G +LD  I AL++  + + + +  S
Sbjct: 302 RSERIRTYNFPQNRVTDHRIGLTLYKLDQMLDG-DLDEMISALIIADQSEKLKALES 357


>gi|417840267|ref|ZP_12486411.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19107]
 gi|341949077|gb|EGT75687.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19107]
          Length = 361

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 208/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE  + I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKVEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|237793457|ref|YP_002861009.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
 gi|259585216|sp|C3KYH5.1|RF1_CLOB6 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229260673|gb|ACQ51706.1| peptide chain release factor 1 [Clostridium botulinum Ba4 str. 657]
          Length = 358

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/311 (47%), Positives = 222/311 (71%), Gaps = 8/311 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEE---LCLAIDEEKRLQSLLLKSLLPKDDA 62
           E +  Q++++  K ++ E S DKD+ +MA EE   L L +++ +R  ++LL   LPKD  
Sbjct: 50  EYKKAQEDLESDKEMLKEES-DKDLREMAQEEIKELTLKLEDLERELTILL---LPKDPN 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D++D  +E+RAG GGEEA+LFA ++ +MY RY+++K WK E + +  +D+ G+KE + AI
Sbjct: 106 DDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAI 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+ D+VD+ +   DLRID Y
Sbjct: 166 KGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVY 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G GGQ  NTT+SAVR+TH+PTG+ ++ QDE+SQ  NK KA+KVL A+L+E   +   
Sbjct: 226 RASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERA 285

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            S ++ R  Q+G+GDRSERIRTYN+PQGR+TDHR+G+T + +   ++G ++D  I+AL+ 
Sbjct: 286 ASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDG-DIDEVIEALVT 344

Query: 303 QQEMDAIASFG 313
           + + + +   G
Sbjct: 345 EDQAEKMKDLG 355


>gi|420464766|ref|ZP_14963533.1| peptide chain release factor 1 [Helicobacter pylori Hp H-6]
 gi|393082253|gb|EJB82969.1| peptide chain release factor 1 [Helicobacter pylori Hp H-6]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|422654390|ref|ZP_16717133.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
           str. M302091]
 gi|330967416|gb|EGH67676.1| peptide chain release factor 1 [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 360

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L ++L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYTQLARVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGESVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|384888733|ref|YP_005763035.1| peptide chain release factor 1 [Helicobacter pylori v225d]
 gi|297379299|gb|ADI34186.1| peptide chain release factor 1 [Helicobacter pylori v225d]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|240950074|ref|ZP_04754376.1| peptide chain release factor 1 [Actinobacillus minor NM305]
 gi|240295449|gb|EER46204.1| peptide chain release factor 1 [Actinobacillus minor NM305]
          Length = 360

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E ++L+  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIEENKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY++ K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYAEGKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ +    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|423108930|ref|ZP_17096625.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5243]
 gi|423114890|ref|ZP_17102581.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5245]
 gi|376383124|gb|EHS95852.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5243]
 gi|376383765|gb|EHS96492.1| peptide chain release factor 1 [Klebsiella oxytoca 10-5245]
          Length = 360

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 219/309 (70%), Gaps = 6/309 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++ R  Q +I+  + ++    +D +M +MA EEL  A ++ ++++  L   LLPKD  DE
Sbjct: 53  TDWRQLQDDIEAAQMML----DDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  G+KE  A ISG
Sbjct: 109 RNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYR 183
            GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+R
Sbjct: 169 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDINPSDLRIDTFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E SR   
Sbjct: 229 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQ 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRS+R RTYN+PQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ +
Sbjct: 289 AEASERRNLLGSGDRSDRNRTYNYPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQE 347

Query: 304 QEMDAIASF 312
            + D +A+ 
Sbjct: 348 YQADQLAAL 356


>gi|354724247|ref|ZP_09038462.1| peptide chain release factor 1 [Enterobacter mori LMG 25706]
          Length = 360

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 151/310 (48%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  GYKE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSANEGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|332295519|ref|YP_004437442.1| peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
 gi|332178622|gb|AEE14311.1| Peptide chain release factor 1 [Thermodesulfobium narugense DSM
           14796]
          Length = 361

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/297 (49%), Positives = 215/297 (72%), Gaps = 3/297 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           +EL   +  +  LK L  + SED+++  +A EE  +     + L+S LL  +LPKD  DE
Sbjct: 54  NELNKLKNYLSDLKEL--KNSEDEEIKALAEEEFQVVEKNIENLESKLLNFILPKDPLDE 111

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           ++ ILE+RAG GGEEA+LFA ++ +MY RY+++K  K E++ + E+ + G KEA  +I G
Sbjct: 112 KNIILEIRAGAGGEEAALFASELLRMYLRYAERKNAKTEILSINETGIGGIKEAIISIKG 171

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
             +Y +LKFESG HRVQRVP TE  GR+HTS  +VA+LP+ADE+D+ +  +DL+IDT+R+
Sbjct: 172 KRIYSRLKFESGTHRVQRVPETESGGRIHTSTATVAVLPEADEIDITIDEKDLKIDTFRA 231

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
           GG+GGQH N T+SAVR+TH+PTG+ ++ QDERSQ  NK KA+++L AK+ E +R      
Sbjct: 232 GGAGGQHVNKTDSAVRITHLPTGIVVACQDERSQFQNKEKAMRILAAKILEEKRVASEKE 291

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            +  R  Q+GSGDRSE+IRTYNFPQGRVTDHR+ +T + ++++++G +LD  IDAL+
Sbjct: 292 IAMSRRIQVGSGDRSEKIRTYNFPQGRVTDHRINLTLYRLNEVLDG-DLDEIIDALI 347


>gi|348027434|ref|YP_004767239.1| peptide chain release factor 1 [Megasphaera elsdenii DSM 20460]
 gi|341823488|emb|CCC74412.1| peptide chain release factor 1 [Megasphaera elsdenii DSM 20460]
          Length = 362

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 144/288 (50%), Positives = 209/288 (72%), Gaps = 2/288 (0%)

Query: 14  IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           IDG K +I +   D D++ MA EE+     E+  L+  L   +LPKD  D+++ I+E+RA
Sbjct: 61  IDGDKEIIDDPDSDNDLIAMAKEEMNGLTKEQADLEDQLHVLMLPKDPRDDKNVIMEIRA 120

Query: 74  GTGGEEASLFAVDVFKMYERYSQKK-GWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           G GG+EA+LFA D+F+MY +Y +K+ GWK  ++     +L G+KE   ++ G GVYGKLK
Sbjct: 121 GAGGDEAALFAGDLFRMYMKYIEKQPGWKTSIISSNAPELGGFKEVVFSVEGSGVYGKLK 180

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           +ESG+HRVQRVP+TE  GR+HTS  +VA+LP+A++V++ L  +D+R+D +R+ G+GGQH 
Sbjct: 181 YESGVHRVQRVPVTEAGGRIHTSTATVAVLPEAEDVEIDLNMDDVRVDYFRASGAGGQHV 240

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           N T+SAVR+THIPTGM +  QDERSQ  N+AKAL+VL A+L +  + +     ++ R  Q
Sbjct: 241 NKTSSAVRMTHIPTGMVVECQDERSQLENRAKALRVLKARLLDQAQQKADAELTEERRSQ 300

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           +G+GDRSERIRTYNFPQGRVTDHR+ +T + + +++ G ++D FI AL
Sbjct: 301 VGTGDRSERIRTYNFPQGRVTDHRINLTLYKLDNILNG-DIDEFIQAL 347


>gi|385216848|ref|YP_005778324.1| peptide chain release factor 1 [Helicobacter pylori F16]
 gi|317176897|dbj|BAJ54686.1| peptide chain release factor 1 [Helicobacter pylori F16]
          Length = 352

 Score =  307 bits (786), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|254253376|ref|ZP_04946694.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
 gi|124895985|gb|EAY69865.1| Peptide chain release factor 1 [Burkholderia dolosa AUO158]
          Length = 360

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +E+  A D   RL+  L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADPSMRDFAEDEIRSARDRMARLELELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEAIMDG-DLDELIGALVSEHQAELLASLG 357


>gi|411008402|ref|ZP_11384731.1| peptide chain release factor 1 [Aeromonas aquariorum AAK1]
          Length = 362

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 144/316 (45%), Positives = 215/316 (68%), Gaps = 4/316 (1%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +H   + R  ++ ++  + ++ E  ED D+ +MA EEL LA    +  +  L   LLP+D
Sbjct: 49  VHAFQQFRQAEENLEATRQMLEE--EDADLREMAQEELPLAKATFEEQEQALQVMLLPRD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+ +C LE+RAG GG+EA++FA D+F+MY RY++++GW+  +V   + +  GYKE  A
Sbjct: 107 PKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIA 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRI 179
            + G  VYG+LKFESG HRVQRVP TE  GRVHTSA +VA+LP+  E + + +   DL+I
Sbjct: 167 KVEGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKI 226

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT+R+ G+GGQH N T+SA+R+TH+PTG+ +  QDERSQH N+AKA+ VL A+L   E  
Sbjct: 227 DTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDE 286

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R   +    R   +GSGDRSERIRTYN+PQGR+++HR+ +T + + ++MEG +LD  I+ 
Sbjct: 287 RHRAAEQSTRRNLVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLGEIMEG-DLDCVINP 345

Query: 300 LLLQQEMDAIASFGST 315
           ++ + + D +AS   +
Sbjct: 346 MIQEYQADQLASLAES 361


>gi|421724824|ref|ZP_16164031.1| peptide chain release factor 1 [Klebsiella oxytoca M5al]
 gi|410374393|gb|EKP29067.1| peptide chain release factor 1 [Klebsiella oxytoca M5al]
          Length = 360

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 151/309 (48%), Positives = 219/309 (70%), Gaps = 6/309 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++ R  Q +I+  + ++    +D +M +MA EEL  A ++ ++++  L   LLPKD  DE
Sbjct: 53  TDWRQLQDDIEAAQMML----DDPEMREMAQEELREAKEKGEQMEQQLQVLLLPKDPDDE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  G+KE  A ISG
Sbjct: 109 RNAFVEVRAGTGGDEAALFAGDLFRMYSRYAESRRWRVEIMSANEGEHGGFKEVIAKISG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYR 183
            GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+R
Sbjct: 169 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAEMPDISPSDLRIDTFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E SR   
Sbjct: 229 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVSRRQQ 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRS+R RTYN+PQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ +
Sbjct: 289 AEASERRNLLGSGDRSDRNRTYNYPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQE 347

Query: 304 QEMDAIASF 312
            + D +A+ 
Sbjct: 348 YQADQLAAL 356


>gi|420495159|ref|ZP_14993724.1| peptide chain release factor 1 [Helicobacter pylori Hp P-23]
 gi|393113292|gb|EJC13811.1| peptide chain release factor 1 [Helicobacter pylori Hp P-23]
          Length = 352

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|193222210|emb|CAL60419.2| Peptide chain release factor 1 (RF-1) [Herminiimonas
           arsenicoxydans]
          Length = 361

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM + A EE+  A    ++L+  L K LLPKD  DER+  LE+RAGTGG+E++LFA D
Sbjct: 72  DPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFAGD 131

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY R++++  W+ E+V  + S++ GYKE    I G G Y KLKFESG HRVQRVP T
Sbjct: 132 LLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVPAT 191

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADEV DV +   DLRIDTYR+ G+GGQH N T+SAVR+THIP
Sbjct: 192 ETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITHIP 251

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NKA ALKVL A++ +++        +  R   IGSGDRSERIRTY
Sbjct: 252 TGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKSLIGSGDRSERIRTY 311

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  +M+G+ L    +AL  + + D +A+ G
Sbjct: 312 NFPQGRMTDHRINLTLYKLDFIMDGD-LTELTNALAAEHQADLLAALG 358


>gi|442608870|ref|ZP_21023611.1| Peptide chain release factor 1 [Pseudoalteromonas luteoviolacea B =
           ATCC 29581]
 gi|441749482|emb|CCQ09673.1| Peptide chain release factor 1 [Pseudoalteromonas luteoviolacea B =
           ATCC 29581]
          Length = 361

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 205/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM +MA EE   A    ++L   L   ++PKD  D  +  LEVRAGTGG+EA++FA D
Sbjct: 73  DPDMREMAQEEYKEAKVRVEKLDGELQILMIPKDPRDNNNVFLEVRAGTGGDEAAIFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + WK EV+   E +  G+KE  A I+G GV+GKLKFESG HRVQRVP T
Sbjct: 133 LFRMYSRYAETQKWKVEVISCNEGEHGGFKEVIANITGEGVFGKLKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GRVHTSA +VA++P+  E + + +   DL+IDT+R+ G+GGQH N T+SA+R+TH+P
Sbjct: 193 ESQGRVHTSACTVAVMPELPEAEAIEINPADLKIDTFRASGAGGQHVNKTDSAIRITHLP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH N+AKAL VL A+L + E  +   + +  R   +GSGDRSERIRTY
Sbjct: 253 TGVVVECQDERSQHKNRAKALSVLSARLQQAEDEKRAAAEASERRNLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+G+T + ++++MEG +L+  I  LL++ + D +A+ G
Sbjct: 313 NFPQGRLTDHRIGLTLYRLNEVMEG-DLNCVISPLLVEHQADMLAAMG 359


>gi|444374452|ref|ZP_21173758.1| peptide chain release factor 1 [Helicobacter pylori A45]
 gi|443621107|gb|ELT81547.1| peptide chain release factor 1 [Helicobacter pylori A45]
          Length = 352

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  ++ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVVNPLI 344


>gi|167620578|ref|ZP_02389209.1| peptide chain release factor 1 [Burkholderia thailandensis Bt4]
          Length = 360

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 151/295 (51%), Positives = 207/295 (70%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A +   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESASDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|420398142|ref|ZP_14897355.1| peptide chain release factor 1 [Helicobacter pylori CPY1962]
 gi|393014816|gb|EJB15987.1| peptide chain release factor 1 [Helicobacter pylori CPY1962]
          Length = 352

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  ED+++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDRELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|254468209|ref|ZP_05081615.1| peptide chain release factor 1 [beta proteobacterium KB13]
 gi|207087019|gb|EDZ64302.1| peptide chain release factor 1 [beta proteobacterium KB13]
          Length = 358

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 153/302 (50%), Positives = 208/302 (68%), Gaps = 8/302 (2%)

Query: 16  GLKSLIYECSEDKDML------DMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCIL 69
           G K L+    E K+ML      + A EE+  + DE    +S L   L+PKD  D+++  L
Sbjct: 54  GYKKLVKNIEEAKEMLSDPEMKEFAQEEIDNSKDEIINFESKLQTLLIPKDPNDDKNIFL 113

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYG 129
           E+RAGTGG+E++LFA D+++MY RY+++  W  EV+   ES L GYKE  A I+G G Y 
Sbjct: 114 EIRAGTGGDESALFAADLYRMYTRYAERNNWNVEVISSNESGLGGYKEIIAKINGDGAYS 173

Query: 130 KLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSG 188
           KLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ADE+ DV +   D+RIDTYR+ G+G
Sbjct: 174 KLKFESGGHRVQRVPDTETQGRIHTSACTVAVLPEADEIEDVDINPADIRIDTYRASGAG 233

Query: 189 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKL 248
           GQH N T+SAVR+TH PTG+ +  QD+RSQH NKA+A+ +L AK+ + +       R+  
Sbjct: 234 GQHINKTDSAVRITHEPTGIVVECQDDRSQHRNKAQAMSILAAKIKDNQIQAQQSQRASE 293

Query: 249 RSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDA 308
           R   IGSGDRSERIRTYNFPQGR+TDHR+ +T + I  +M+G+ L+  I+AL L+ +   
Sbjct: 294 RKSLIGSGDRSERIRTYNFPQGRITDHRINLTLYKIDFIMDGD-LEEMINALSLEHQASL 352

Query: 309 IA 310
           +A
Sbjct: 353 LA 354


>gi|319790214|ref|YP_004151847.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
 gi|317114716|gb|ADU97206.1| peptide chain release factor 1 [Thermovibrio ammonificans HB-1]
          Length = 365

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 140/265 (52%), Positives = 197/265 (74%), Gaps = 1/265 (0%)

Query: 48  LQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGV 107
           L+  L K L+PKD  DE++ ILE+RAG GGEEA+LFA D+F+MY RY+++KGWK E++ +
Sbjct: 95  LEGELKKLLIPKDPNDEKNVILEIRAGAGGEEAALFAQDLFRMYCRYAERKGWKVEILSM 154

Query: 108 TESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE 167
            E+ L G KE  A ISG G Y +LK+ESG+HRVQR+P+TE  GR+HTS  +VAILP+A+E
Sbjct: 155 NETGLGGIKEVVATISGKGAYSRLKYESGVHRVQRIPVTESGGRIHTSTATVAILPEAEE 214

Query: 168 VDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALK 227
           V++ ++  DL+IDTYRS G+GGQH NTT+SAVR+TH+PTG+ ++  +ERSQ  N+ KA+K
Sbjct: 215 VEIEIKESDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCSNERSQIQNRIKAMK 274

Query: 228 VLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDM 287
           +L A+L E+   +        R  Q+GSGDRSE+IRTYNFP+GRVTDHR+ +T + + + 
Sbjct: 275 ILRARLKELYERQQKEKMDSARKAQVGSGDRSEKIRTYNFPEGRVTDHRIKLTLYNLQEF 334

Query: 288 MEGENLDIFIDALLLQQEMDAIASF 312
           ++G +LD  IDAL   ++   I + 
Sbjct: 335 LDG-DLDEMIDALAAAEQAKKIEAL 358


>gi|83720975|ref|YP_443437.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|167582488|ref|ZP_02375362.1| peptide chain release factor 1 [Burkholderia thailandensis TXDOH]
 gi|257137781|ref|ZP_05586043.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
 gi|119361517|sp|Q2SUG2.1|RF1_BURTA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|83654800|gb|ABC38863.1| peptide chain release factor 1 [Burkholderia thailandensis E264]
          Length = 360

 Score =  307 bits (786), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 151/295 (51%), Positives = 207/295 (70%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A +   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDELRGARERMSRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|430809726|ref|ZP_19436841.1| peptide chain release factor 1 [Cupriavidus sp. HMR-1]
 gi|429497839|gb|EKZ96360.1| peptide chain release factor 1 [Cupriavidus sp. HMR-1]
          Length = 360

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M + A +E+  A +  + L++ L   LLPKD  D+R+ +LE+RAGTGGEE++LFA 
Sbjct: 70  DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFAA 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY++++ W+ E++  + SDL GYKE    I+G   + +LKFESG HRVQRVP 
Sbjct: 130 DLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADEV +V +   DLR+DT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QD+RSQH NK KA+KVL A++ +M+        +  R   IGSGDRS+RIRT
Sbjct: 250 PTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEASTRRNLIGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + I  +M+G +LD  I AL  + + D +A+ G
Sbjct: 310 YNFPQGRVTDHRINLTLYKIDMIMDG-DLDELISALSAEHQADQLAALG 357


>gi|284047800|ref|YP_003398139.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
 gi|283952021|gb|ADB46824.1| peptide chain release factor 1 [Acidaminococcus fermentans DSM
           20731]
          Length = 358

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 146/305 (47%), Positives = 214/305 (70%), Gaps = 3/305 (0%)

Query: 3   LISELRTKQKEIDGLK--SLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +++  R  +K +D  K    I +  ED+++  MA EE+       +  +  L   LLP+D
Sbjct: 47  IVTVYREYKKLVDTWKDDEAIVKAREDQELTAMAEEEMQELQPRLEAYEEKLTLLLLPRD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             DE++ I+E+RAG GG+EA+LFA D+F+MY RY+++KGWK E++  + + L G+KE   
Sbjct: 107 PNDEKNIIMEIRAGAGGDEAALFAGDLFRMYTRYAEQKGWKVELMDSSPTGLGGFKEVVF 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
            +SG  VY  +KFESG+HRVQRVP TE  GRVHTS V+VA++P+A EVD+ L   D+R+D
Sbjct: 167 MVSGTDVYSHMKFESGVHRVQRVPDTESQGRVHTSTVTVAVMPEAQEVDIELNPADIRVD 226

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           TYR+GG+GGQ+ N T SAVR+THIPTG+    QDE+SQ  N+ K L+VL +++ E E+ +
Sbjct: 227 TYRAGGAGGQYVNKTESAVRMTHIPTGIVAQCQDEKSQAKNREKCLRVLRSRILEAEQEK 286

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
              + +  R  Q+G+GDRSERIRTYN+PQGRVTDHR+G+T H + D++ G +LD  +DAL
Sbjct: 287 QRAATAAERKSQVGTGDRSERIRTYNYPQGRVTDHRIGLTLHKLPDIING-DLDELLDAL 345

Query: 301 LLQQE 305
           ++ ++
Sbjct: 346 MMAEQ 350


>gi|386859421|ref|YP_006272127.1| Peptide chain release factor 1 [Borrelia crocidurae str. Achema]
 gi|384934302|gb|AFI30975.1| Peptide chain release factor 1 [Borrelia crocidurae str. Achema]
          Length = 357

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 141/302 (46%), Positives = 215/302 (71%), Gaps = 9/302 (2%)

Query: 2   HLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDD 61
           H+++++   QK        I    ++ +M D+  +E+     ++  +++ +   LL +D 
Sbjct: 54  HILNQINENQK--------ILSEEDNLEMKDLIKQEIAHLYSKKDEIENTIKILLLHQDK 105

Query: 62  ADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAA 121
            D+++ I+E+RAGTGGEEA+LFA ++++MY +YS+KK WK E++   E++L G+KE S  
Sbjct: 106 NDDKNIIIEIRAGTGGEEAALFAHNLYEMYTKYSEKKKWKTELINFNETELGGFKEVSFE 165

Query: 122 ISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDT 181
           I G  V+ KLK ESG+HRVQR+P+TE +G++ TSA +VA+LP+ ++ D+ + ++DLRID 
Sbjct: 166 IKGKDVFKKLKHESGVHRVQRIPITESNGKLQTSAATVAVLPEVEDTDIEINDKDLRIDV 225

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH NTT+SAVR+TH+PTG+    Q+ERSQH NK +A+K+L A+LYE+E  + 
Sbjct: 226 YRSSGAGGQHVNTTDSAVRITHLPTGIVAQCQNERSQHKNKEQAMKILRARLYELENLKK 285

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
              RS  R +Q+GSGDRSERIRTYNFPQ RVTDHR  I+ + + ++M+GE LD  ++ L 
Sbjct: 286 QEQRSNDRKQQVGSGDRSERIRTYNFPQNRVTDHRANISLYKLEEIMQGE-LDSLLNTLA 344

Query: 302 LQ 303
           L+
Sbjct: 345 LK 346


>gi|237799727|ref|ZP_04588188.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331022582|gb|EGI02639.1| peptide chain release factor 1 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 360

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 150/312 (48%), Positives = 217/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  +L   Q +++G ++L+ +   D DM DMA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYKQLIKVQADLEGAQALLKDS--DPDMRDMAVEEVRETKQQLVDLEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|28897517|ref|NP_797122.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153840439|ref|ZP_01993106.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|260364112|ref|ZP_05776832.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
 gi|260897557|ref|ZP_05906053.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|260903527|ref|ZP_05911922.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|433657015|ref|YP_007274394.1| Peptide chain release factor 1 [Vibrio parahaemolyticus BB22OP]
 gi|31076863|sp|Q87RN4.1|RF1_VIBPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28805729|dbj|BAC59006.1| peptide chain release factor 1 [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149745897|gb|EDM57027.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ3810]
 gi|308086350|gb|EFO36045.1| peptide chain release factor 1 [Vibrio parahaemolyticus Peru-466]
 gi|308110855|gb|EFO48395.1| peptide chain release factor 1 [Vibrio parahaemolyticus AQ4037]
 gi|308114221|gb|EFO51761.1| peptide chain release factor 1 [Vibrio parahaemolyticus K5030]
 gi|432507703|gb|AGB09220.1| Peptide chain release factor 1 [Vibrio parahaemolyticus BB22OP]
          Length = 362

 Score =  306 bits (785), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKDAKEAIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E+ R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|134294603|ref|YP_001118338.1| peptide chain release factor 1 [Burkholderia vietnamiensis G4]
 gi|166223537|sp|A4JB50.1|RF1_BURVG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|134137760|gb|ABO53503.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           vietnamiensis G4]
          Length = 360

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 206/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A E +  A +   RL+  L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEEAIRSARERMTRLEGELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEALMDG-DLDELIGALVSEHQAELLASLG 357


>gi|238788553|ref|ZP_04632346.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
 gi|238723466|gb|EEQ15113.1| Peptide chain release factor 1 [Yersinia frederiksenii ATCC 33641]
          Length = 360

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
             E R+ Q ++D  + ++    ED +M +MA EEL  A    + L+  L   LLPKD  D
Sbjct: 52  FKEWRSVQDDLDAAEMML----EDPEMREMAQEELKEAKARSEELEQQLQLLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ERDC LE+RAGTGG+EA++FA D+F+MY RY++ + WK E++  +E +  GYKE  A +S
Sbjct: 108 ERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTY 182
           G GV+G+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E ++   N  DLRIDT+
Sbjct: 168 GDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH NKAKA+ VL A++   E  +  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           L+ +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I  ++ 
Sbjct: 288 LAEASERRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIQPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +++ 
Sbjct: 347 EYQADQLSAL 356


>gi|415942784|ref|ZP_11555980.1| Peptide chain release factor 1 [Herbaspirillum frisingense GSF30]
 gi|407758794|gb|EKF68568.1| Peptide chain release factor 1 [Herbaspirillum frisingense GSF30]
          Length = 355

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D DM   A EE+  A    + L+  L K LLP+D  DER+  LE+RAGTGG+E++L
Sbjct: 63  ELLSDPDMKAFAQEEIDGAKARMEALELDLQKMLLPRDPNDERNIFLEIRAGTGGDESAL 122

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E+V  +ES+L GYKE  A I G G Y +LKFESG HRVQR
Sbjct: 123 FAGDLLRMYTRYAERQRWQVEIVSSSESELGGYKEVIARIVGFGAYSRLKFESGGHRVQR 182

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADEV DV +   D+RIDTYR+ G+GGQH N T+SAVR+
Sbjct: 183 VPATETQGRIHTSACTVAVMPEADEVEDVDINPADIRIDTYRASGAGGQHINKTDSAVRI 242

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NKA+A+KVL A++ +++        +  R   IGSGDRSER
Sbjct: 243 THLPTGIVVECQDDRSQHKNKAQAMKVLAARIKDVQLREQQSKEAATRKSLIGSGDRSER 302

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD   +AL+ + + + +A  G
Sbjct: 303 IRTYNFPQGRMTDHRINLTLYKLDFIMDG-DLDELTNALITEHQAELLAQLG 353


>gi|256821856|ref|YP_003145819.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
 gi|256795395|gb|ACV26051.1| peptide chain release factor 1 [Kangiella koreensis DSM 16069]
          Length = 364

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 143/288 (49%), Positives = 211/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           ED DM +MA EEL  A  + + L+  + K LLP+D  D+++  LE+RAGTGG+EA++FA 
Sbjct: 73  EDPDMREMAQEELKDAKGQIELLEVEMQKLLLPRDPNDDKNTFLEIRAGTGGDEAAIFAG 132

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++KK W+ EV+  ++ +  GYKE    ISG  VY  LKFESG HRVQRVP 
Sbjct: 133 DLFRMYSKYAEKKRWQVEVISQSDGEHGGYKEIIVRISGDSVYSHLKFESGAHRVQRVPE 192

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADE+D + +   DL+IDT+R+ G+GGQH N T+SA+R+TH+
Sbjct: 193 TESQGRIHTSACTVAVMPEADELDAIEINPADLKIDTFRASGAGGQHVNKTDSAIRITHL 252

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A+L   E+++    ++++R   +G+GDRS+RIRT
Sbjct: 253 PTGVVVECQDERSQHKNKAKAMSVLQARLTAAEQAKAQSEQTEMRRNLVGTGDRSDRIRT 312

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGR+TDHR+ +T + + ++MEG ++D  +  L+ + + D +A+ 
Sbjct: 313 YNFPQGRMTDHRINLTLYKLDEIMEG-DIDQIVGPLIQEHQADQLAAL 359


>gi|386747730|ref|YP_006220938.1| peptide chain release factor 1 [Helicobacter cetorum MIT 99-5656]
 gi|384553972|gb|AFI05728.1| peptide chain release factor 1 [Helicobacter cetorum MIT 99-5656]
          Length = 352

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKVLEVKKGELETSIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K W+ E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DLRI+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLRIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSER+
Sbjct: 246 HIPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERV 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|417320522|ref|ZP_12107068.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
 gi|328473485|gb|EGF44333.1| peptide chain release factor 1 [Vibrio parahaemolyticus 10329]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKDAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E+ R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEQERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|420522209|ref|ZP_15020635.1| peptide chain release factor 1 [Helicobacter pylori Hp P-11b]
 gi|393130439|gb|EJC30868.1| peptide chain release factor 1 [Helicobacter pylori Hp P-11b]
          Length = 316

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 30  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 89

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 90  FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 149

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 150 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 209

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 210 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 269

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 270 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 308


>gi|387126387|ref|YP_006294992.1| peptide chain release factor 1 [Methylophaga sp. JAM1]
 gi|386273449|gb|AFI83347.1| Peptide chain release factor 1 [Methylophaga sp. JAM1]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/285 (51%), Positives = 209/285 (73%), Gaps = 2/285 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M +MA EEL +A +++++L   L K LLPKD  D+R+  LEVRAGTGG+EA++F+ D
Sbjct: 73  DPEMREMAKEELAIAEEKQEQLAIDLQKLLLPKDPNDQRNIFLEVRAGTGGDEAAIFSGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + W+ EV+   E +  GYKE  A I G G Y +LKFESG HRVQRVP T
Sbjct: 133 LFRMYTRYAESRRWQVEVLNAQEGEHGGYKEIIARIVGDGAYSRLKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VAILP+ADE+D + +   D+++DT+RS G+GGQH NTT+SAVR+THIP
Sbjct: 193 ESQGRIHTSACTVAILPEADEIDQIEINPADIKMDTFRSSGAGGQHVNTTDSAVRITHIP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  Q+ERSQH N+AKA+ VL +++   +  +    +++ R   +GSGDRSERIRTY
Sbjct: 253 TGIIVECQEERSQHKNRAKAMSVLQSRIMAAKEEKQASEQAETRRLLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
           N+PQGR+TDHR+ +T + + ++M G+ LD  ID L+ + + D +A
Sbjct: 313 NYPQGRITDHRINLTLYKLDEVMSGQ-LDQVIDPLISEYQADQLA 356


>gi|261209906|ref|ZP_05924207.1| peptide chain release factor 1 [Vibrio sp. RC341]
 gi|260841092|gb|EEX67617.1| peptide chain release factor 1 [Vibrio sp. RC341]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   I+ ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIEPVIHEHQADQLAALA 359


>gi|88861344|ref|ZP_01135974.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
 gi|88816610|gb|EAR26435.1| Peptide chain release factor 1 (RF-1) [Pseudoalteromonas tunicata
           D2]
          Length = 361

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 144/288 (50%), Positives = 204/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           ED DM DMA +E   A  + + L   L   +LPKD  D  +  LEVRAGTGG+EA++FA 
Sbjct: 72  EDPDMRDMAQDEFKAAKAQLETLTDELQVLMLPKDPKDNNNVYLEVRAGTGGDEAAIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++ + WK E+V   E +  GYKE  A ISG GVYGKLKFESG+HRVQRVP 
Sbjct: 132 DLFRMYARFAETQKWKVEIVSANEGEHGGYKEVIANISGTGVYGKLKFESGVHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++P+  E + + +   D+++DT+R+ G+GGQH N T+SA+R+THI
Sbjct: 192 TESQGRVHTSACTVAVMPEIPEAEAIEINAADIKVDTFRASGAGGQHVNKTDSAIRITHI 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH N+AKA+ VL ++L + E  + H   +  R   +GSGDRSERIRT
Sbjct: 252 PTGVVVECQDERSQHKNRAKAMSVLASRLQQAEDEKRHAEEATQRRNLVGSGDRSERIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGR+TDHR+ +T + +++++ G+ L I I+ L+ + + D +A+ 
Sbjct: 312 YNYPQGRITDHRINLTLYKLNEIVSGDLLPI-INPLVQEHQADLLAAM 358


>gi|365540924|ref|ZP_09366099.1| peptide chain release factor 1 [Vibrio ordalii ATCC 33509]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 205/289 (70%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           ED +M +MA EE+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  EDAEMREMAQEEIKAAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++K  W+ E++  + ++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAEKMSWRIEIMSASYAEHGGYKEVIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAI+P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E ++     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIAQAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPIIQEYQADQLAALA 359


>gi|320109111|ref|YP_004184701.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
 gi|319927632|gb|ADV84707.1| peptide chain release factor 1 [Terriglobus saanensis SP1PR4]
          Length = 355

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 148/299 (49%), Positives = 211/299 (70%), Gaps = 2/299 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           LI + R  ++ ++G+    +    D DM +MA EEL   +  +  ++  L   LLPKD  
Sbjct: 44  LIEKFREFKEVMNGIAD-AHTMLADPDMKEMAEEELSTLMPRKTEIEEELKIMLLPKDPN 102

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D ++ +LE+RAGTGG+EA+LFA ++F+MY R++++  WK EV+   E  + G KE +A  
Sbjct: 103 DSKNVVLEIRAGTGGDEAALFAEEMFRMYLRFAEQHRWKVEVLSEREGAVGGMKEVTAIF 162

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G  VY +LK+ESG+HRVQRVP TE  GRVHTSA++VA+LP+A+EVDV++  +DLRIDT+
Sbjct: 163 EGDQVYSQLKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEEVDVKIEAKDLRIDTF 222

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
            S G GGQ  NTT SA+R+TH+PT   +S QDE+SQ  N+ KA++VL ++LYE+E  R+H
Sbjct: 223 CSSGPGGQSVNTTYSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRSRLYEVEMERVH 282

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             ++  R  Q+GSGDRSE+IRTYNFPQ R+TDHR+G+T H +  +MEG  L   +DAL+
Sbjct: 283 QLQATARKAQVGSGDRSEKIRTYNFPQNRLTDHRIGLTLHQLEYVMEG-KLQPVVDALI 340


>gi|420469976|ref|ZP_14968687.1| peptide chain release factor 1 [Helicobacter pylori Hp H-11]
 gi|393087022|gb|EJB87692.1| peptide chain release factor 1 [Helicobacter pylori Hp H-11]
          Length = 352

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK EVV  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEVVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L  +LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|119361586|sp|Q1LIF3.2|RF1_RALME RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M + A +E+  A +  + L++ L   LLPKD  D+R+ +LE+RAGTGGEE++LFA 
Sbjct: 70  DDPEMKEFAADEIDAARERLQSLENSLQTLLLPKDPNDDRNLLLEIRAGTGGEESALFAA 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY++++ W+ E++  + SDL GYKE    I+G   + +LKFESG HRVQRVP 
Sbjct: 130 DLLRMYTRYAERRRWQVEIMSESPSDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADEV +V +   DLR+DT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPEADEVGEVEINPSDLRVDTFRASGAGGQHVNKTDSAVRLTHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QD+RSQH NK KA+KVL A++ +M+        +  R   IGSGDRS+RIRT
Sbjct: 250 PTGIVVECQDDRSQHRNKEKAMKVLAARIKDMQLRAAQAKEANTRRNLIGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + I  +M+G +LD  I AL  + + D +A+ G
Sbjct: 310 YNFPQGRVTDHRINLTLYKIDMIMDG-DLDELISALSAEHQADQLAALG 357


>gi|258621065|ref|ZP_05716099.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|258626137|ref|ZP_05720985.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|262170842|ref|ZP_06038520.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
 gi|449146778|ref|ZP_21777540.1| Peptide chain release factor 1 [Vibrio mimicus CAIM 602]
 gi|258581492|gb|EEW06393.1| Peptide chain release factor 1 [Vibrio mimicus VM603]
 gi|258586453|gb|EEW11168.1| Peptide chain release factor 1 [Vibrio mimicus VM573]
 gi|261891918|gb|EEY37904.1| peptide chain release factor 1 [Vibrio mimicus MB-451]
 gi|449077631|gb|EMB48603.1| Peptide chain release factor 1 [Vibrio mimicus CAIM 602]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +E+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQDEIKAAKAAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY R+++KKGW+ EV+  +E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRFAEKKGWRIEVMSSSEAEHGGYKEMIAKVNGDGAYGTLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TEAQGRIHTSACTVAVMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E S+     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIAQAEESKRAAEISDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   I+ ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLTEVMEG-DMQSLIEPVIHEHQADQLAALA 359


>gi|404378163|ref|ZP_10983261.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
 gi|294484033|gb|EFG31716.1| peptide chain release factor 1 [Simonsiella muelleri ATCC 29453]
          Length = 358

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/292 (50%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  + ++L   L K LLPKD  D+++  +E+RAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEHAKTQIEQLDFELQKLLLPKDADDDKNIFIEIRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R++++  W+ E+V  +ESDL GYKE    + G+G Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRFAERNRWQTEIVSASESDLGGYKEVIVRLIGLGAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +++L   DLRIDT+R+ G+GGQH N T+SA+R+
Sbjct: 187 VPTTESQGRIHTSACTVAVMPEADELEEIQLNPNDLRIDTFRASGAGGQHINKTDSAIRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDKQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +++    AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DMEEITSALIAEHQAELLAAMG 357


>gi|134093473|ref|YP_001098548.1| peptide chain release factor 1 [Herminiimonas arsenicoxydans]
          Length = 356

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM + A EE+  A    ++L+  L K LLPKD  DER+  LE+RAGTGG+E++LFA D
Sbjct: 67  DPDMKEFAQEEMAAAKTRMEQLELDLQKMLLPKDPNDERNIFLEIRAGTGGDESALFAGD 126

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY R++++  W+ E+V  + S++ GYKE    I G G Y KLKFESG HRVQRVP T
Sbjct: 127 LLRMYTRFAERNRWQIEMVSESASEVGGYKEVIVRIVGNGAYSKLKFESGGHRVQRVPAT 186

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADEV DV +   DLRIDTYR+ G+GGQH N T+SAVR+THIP
Sbjct: 187 ETQGRIHTSACTVAVMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITHIP 246

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NKA ALKVL A++ +++        +  R   IGSGDRSERIRTY
Sbjct: 247 TGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSQEAATRKSLIGSGDRSERIRTY 306

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  +M+G+ L    +AL  + + D +A+ G
Sbjct: 307 NFPQGRMTDHRINLTLYKLDFIMDGD-LTELTNALAAEHQADLLAALG 353


>gi|444428527|ref|ZP_21223851.1| peptide chain release factor 1 [Vibrio campbellii CAIM 519 = NBRC
           15631]
 gi|444238236|gb|ELU49853.1| peptide chain release factor 1 [Vibrio campbellii CAIM 519 = NBRC
           15631]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+  +E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSSEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|420448092|ref|ZP_14946976.1| peptide chain release factor 1 [Helicobacter pylori Hp H-44]
 gi|393066905|gb|EJB67723.1| peptide chain release factor 1 [Helicobacter pylori Hp H-44]
          Length = 352

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E++  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIISSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|422587436|ref|ZP_16662107.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           morsprunorum str. M302280]
 gi|330873307|gb|EGH07456.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           morsprunorum str. M302280]
          Length = 360

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L ++L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYTQLARVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|374308976|ref|YP_005055406.1| peptide chain release factor 1 [Granulicella mallensis MP5ACTX8]
 gi|358750986|gb|AEU34376.1| peptide chain release factor 1 [Granulicella mallensis MP5ACTX8]
          Length = 356

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 155/306 (50%), Positives = 222/306 (72%), Gaps = 16/306 (5%)

Query: 4   ISELRTKQKEIDGL---KSLIYECSEDKDMLDMATEELC-----LAIDEEKRLQSLLLKS 55
           + + R  +K  DG+   K+++ E   D +M  MA +EL      LA  EE+ L+ LLL  
Sbjct: 45  VDKFREYRKLRDGVAEAKAMLTES--DAEMRAMAEDELLTLEPKLATTEEE-LKVLLL-- 99

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
             PKD  D+++ I+E+RAGTGG+EASLF  +VF+MY R++++  WK EV+  T+SD+ G 
Sbjct: 100 --PKDPNDDKNVIVELRAGTGGDEASLFVAEVFRMYLRFAEQHKWKVEVLSQTDSDVGGL 157

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           K+ +A   G  VY ++K+ESG+HRVQRVP TE  GRVHTSA++VA+LP+A+EVDV++  +
Sbjct: 158 KDVTAIFEGDKVYSQMKYESGVHRVQRVPATETQGRVHTSAITVAVLPEAEEVDVKVEAK 217

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRIDT+ S G GGQ  NTT SA+R+TH+PT   +S QDE+SQ  N+ KA++VL A+LYE
Sbjct: 218 DLRIDTFCSSGPGGQSVNTTYSAIRITHLPTNTVVSCQDEKSQIKNREKAMRVLRARLYE 277

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           +E  R+H  ++K R +Q+G+GDRSE+IRTYNFPQ R+TDHR+G+T+H ++ +MEG  L  
Sbjct: 278 VEAERVHQLQAKERKQQVGTGDRSEKIRTYNFPQNRLTDHRIGLTNHQLAMVMEG-LLQP 336

Query: 296 FIDALL 301
            +DAL+
Sbjct: 337 TVDALI 342


>gi|260433480|ref|ZP_05787451.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417308|gb|EEX10567.1| peptide chain release factor 1 [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 351

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 149/302 (49%), Positives = 214/302 (70%), Gaps = 8/302 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
           S+L+   ++I   + L  + +E      D DM ++A EE+          +  L  +LLP
Sbjct: 38  SDLKPVVEQIAAWRQLRADLAEAEAMLGDPDMKELAEEEIPQLKARIPEAEHALQLALLP 97

Query: 59  KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
           KD AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GW+FE++    ++L G KE 
Sbjct: 98  KDAADARPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEARGWQFEIIEEQHTELGGIKEV 157

Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
            A I G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+++   D+R
Sbjct: 158 VAHIKGDNVFARLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQIDPNDIR 217

Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
           IDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY++ER
Sbjct: 218 IDTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHRNREIAMQVLKTRLYDLER 276

Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
            RI   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  ID
Sbjct: 277 QRIDSERSADRASQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDQIMQG-DLDEVID 335

Query: 299 AL 300
           AL
Sbjct: 336 AL 337


>gi|388603011|ref|ZP_10161407.1| peptide chain release factor 1 [Vibrio campbellii DS40M4]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+  +E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSSEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|53717070|ref|YP_105275.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|67639917|ref|ZP_00438745.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|121597849|ref|YP_990282.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124382410|ref|YP_001024781.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126447218|ref|YP_001079120.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|251768001|ref|ZP_04820356.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
 gi|254175822|ref|ZP_04882481.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|254203239|ref|ZP_04909601.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|254208574|ref|ZP_04914923.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|254355790|ref|ZP_04972069.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|61214592|sp|Q62DF3.1|RF1_BURMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223532|sp|A3MFT4.1|RF1_BURM7 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223533|sp|A2RYL2.1|RF1_BURM9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223534|sp|A1UWC9.1|RF1_BURMS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|52423040|gb|AAU46610.1| peptide chain release factor 1 [Burkholderia mallei ATCC 23344]
 gi|121225647|gb|ABM49178.1| peptide chain release factor 1 [Burkholderia mallei SAVP1]
 gi|124290430|gb|ABM99699.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10229]
 gi|126240072|gb|ABO03184.1| peptide chain release factor 1 [Burkholderia mallei NCTC 10247]
 gi|147746284|gb|EDK53362.1| peptide chain release factor 1 [Burkholderia mallei FMH]
 gi|147751261|gb|EDK58329.1| peptide chain release factor 1 [Burkholderia mallei JHU]
 gi|148024761|gb|EDK82944.1| peptide chain release factor 1 [Burkholderia mallei 2002721280]
 gi|160696865|gb|EDP86835.1| peptide chain release factor 1 [Burkholderia mallei ATCC 10399]
 gi|238520529|gb|EEP83988.1| peptide chain release factor 1 [Burkholderia mallei GB8 horse 4]
 gi|243061104|gb|EES43290.1| peptide chain release factor 1 [Burkholderia mallei PRL-20]
          Length = 360

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 151/295 (51%), Positives = 207/295 (70%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A D   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA ++ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGNLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|395794825|ref|ZP_10474141.1| peptide chain release factor 1 [Pseudomonas sp. Ag1]
 gi|421138189|ref|ZP_15598259.1| peptide chain release factor 1 [Pseudomonas fluorescens BBc6R8]
 gi|395340986|gb|EJF72811.1| peptide chain release factor 1 [Pseudomonas sp. Ag1]
 gi|404510612|gb|EKA24512.1| peptide chain release factor 1 [Pseudomonas fluorescens BBc6R8]
          Length = 360

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 148/304 (48%), Positives = 216/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A D+   L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKDKLIELEGDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|89073091|ref|ZP_01159630.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
 gi|89051044|gb|EAR56501.1| peptide chain release factor 1 [Photobacterium sp. SKA34]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 144/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL   L   L+PKD  D+R+C +E+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKEAKAEIERLADELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++++GW+ E++    S+  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAERRGWRIEIINENRSEQGGYKEMIAKVNGDGAYGILKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA+LP+  E ++   N  DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVLPEIPEAEIPEINAGDLRIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + +   +  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRNAEEASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRV+DHR+ +T + ++++MEG +LD  I  +  + + D +A+ 
Sbjct: 312 YNYPQGRVSDHRITLTLYRLNEVMEG-DLDALIQPVFTEYQADQLAAM 358


>gi|167038767|ref|YP_001661752.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300913648|ref|ZP_07130965.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307723337|ref|YP_003903088.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
 gi|238687578|sp|B0K1F7.1|RF1_THEPX RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166853007|gb|ABY91416.1| peptide chain release factor 1 [Thermoanaerobacter sp. X514]
 gi|300890333|gb|EFK85478.1| peptide chain release factor 1 [Thermoanaerobacter sp. X561]
 gi|307580398|gb|ADN53797.1| peptide chain release factor 1 [Thermoanaerobacter sp. X513]
          Length = 356

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 138/256 (53%), Positives = 192/256 (75%), Gaps = 1/256 (0%)

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  DE++ I+E+RAG GGEEA+LFA D+F+MY  Y++KKGWK E++   E+D+ G+KE
Sbjct: 100 PKDPNDEKNVIMEIRAGAGGEEAALFAHDLFRMYSMYAEKKGWKVEIMSSNETDIGGFKE 159

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
               ISG G Y +LK+ESG+HRVQRVP TE  GR+HTS  +VA+LP+ +EVDV +   D+
Sbjct: 160 VILNISGKGSYSRLKYESGVHRVQRVPTTEAGGRIHTSTATVAVLPEVEEVDVEINPNDI 219

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           ++D +RSGG GGQ  NTT+SAVRVTHIPTG+ ++ QDERSQ  N+ +ALK+L AKLYEM 
Sbjct: 220 KVDVFRSGGHGGQSVNTTDSAVRVTHIPTGIVVTCQDERSQIQNRERALKILRAKLYEMA 279

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
                   ++ R  Q+G+G+RSERIRTYN+PQGRVTDHR+G+T + + ++++G +LD  I
Sbjct: 280 LQEQQREIAETRKSQVGTGERSERIRTYNYPQGRVTDHRIGLTLYRLQEVLDG-DLDEII 338

Query: 298 DALLLQQEMDAIASFG 313
           DAL+L  + + + +  
Sbjct: 339 DALILNDQAEKLKNMN 354


>gi|116625721|ref|YP_827877.1| peptide chain release factor 1 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122252101|sp|Q01RX8.1|RF1_SOLUE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|116228883|gb|ABJ87592.1| bacterial peptide chain release factor 1 (bRF-1) [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 362

 Score =  306 bits (785), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 146/275 (53%), Positives = 204/275 (74%), Gaps = 1/275 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D ++ +MA  E+     E+ R++  L   LLPKD  D+++ +LE+RAGTGG+EA+LFA 
Sbjct: 70  QDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEATLFAA 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F+MY RY++ + WK EV   +ES + G KE  A +SG  VY KLK+ESG+HRVQRVP+
Sbjct: 130 EIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQRVPV 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE+ GRVHTSA++VA+LP+ADEV+V+L  +D+RIDT+ S G GGQ  NTT SAVR+TH+P
Sbjct: 190 TEQQGRVHTSAITVAVLPEADEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVRITHLP 249

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +S QDE+SQ  N+AKA +VL ++LYE+E  +   +    R   +GSGDRSE+IRTY
Sbjct: 250 TGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQAALGAERRTMVGSGDRSEKIRTY 309

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           NFPQ RV+DHR+G+T H +  +MEG  +D  +DAL
Sbjct: 310 NFPQNRVSDHRIGLTLHQLDFVMEG-KMDAIVDAL 343


>gi|420443080|ref|ZP_14942009.1| peptide chain release factor 1 [Helicobacter pylori Hp H-41]
 gi|393061485|gb|EJB62350.1| peptide chain release factor 1 [Helicobacter pylori Hp H-41]
          Length = 352

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|408673534|ref|YP_006873282.1| Peptide chain release factor 1 [Emticicia oligotrophica DSM 17448]
 gi|387855158|gb|AFK03255.1| Peptide chain release factor 1 [Emticicia oligotrophica DSM 17448]
          Length = 359

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 151/296 (51%), Positives = 213/296 (71%), Gaps = 2/296 (0%)

Query: 14  IDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRA 73
           I+G K +I    +D++M D+A EEL   + +++ L++ L + L+PKD  D ++ ILE+RA
Sbjct: 58  IEGAKDIIAN-EKDEEMRDLAKEELDELLPQKETLEATLKEMLIPKDPNDSKNVILEIRA 116

Query: 74  GTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKF 133
           GTGG+EAS+FA D+F+MY+R+ +K+GW+  ++   E    GYKE    + G  VYGKLK+
Sbjct: 117 GTGGDEASIFAGDLFRMYQRFIEKQGWRMTLLDHNEGTAGGYKEIVVQVEGEDVYGKLKY 176

Query: 134 ESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHAN 193
           ESG+HRVQRVP TE  GRVHTSA +VA LP+ADEVD+ +   D+R+DT+ S G+GGQ  N
Sbjct: 177 ESGVHRVQRVPATESQGRVHTSAATVAALPEADEVDLTINMNDIRVDTFCSSGAGGQSVN 236

Query: 194 TTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQI 253
           TT SAVR+ HIPTG+T+S QDERSQ  N+ KAL VL ++LYEME ++ + + S  R   +
Sbjct: 237 TTYSAVRMVHIPTGVTVSCQDERSQIKNREKALSVLRSRLYEMEMAKHNEAISAERKGLV 296

Query: 254 GSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           G+GDRS++IRTYN+PQ RVTDHR+G T + +  +MEGE +D FI+ L +    + I
Sbjct: 297 GNGDRSDKIRTYNYPQSRVTDHRIGYTVYNLPTVMEGE-IDGFIEQLRMADNAEKI 351


>gi|115350468|ref|YP_772307.1| peptide chain release factor 1 [Burkholderia ambifaria AMMD]
 gi|170703671|ref|ZP_02894403.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|172059501|ref|YP_001807153.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
 gi|122324144|sp|Q0BIQ0.1|RF1_BURCM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238689166|sp|B1YSD5.1|RF1_BURA4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|115280456|gb|ABI85973.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           ambifaria AMMD]
 gi|170131417|gb|EDT00013.1| peptide chain release factor 1 [Burkholderia ambifaria IOP40-10]
 gi|171992018|gb|ACB62937.1| peptide chain release factor 1 [Burkholderia ambifaria MC40-6]
          Length = 360

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/294 (51%), Positives = 208/294 (70%), Gaps = 2/294 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +E+  A +   RL++ L K LLPKD  D+R+  LE+RAG GG+E++L
Sbjct: 67  ELLADASMRDFAEDEIRSARERMVRLEAELQKMLLPKDPNDDRNIFLEIRAGAGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G T
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEALMDG-DLDELIGALVTEHQAELLASLGDT 359


>gi|420474957|ref|ZP_14973628.1| peptide chain release factor 1 [Helicobacter pylori Hp H-21]
 gi|393093064|gb|EJB93681.1| peptide chain release factor 1 [Helicobacter pylori Hp H-21]
          Length = 352

 Score =  306 bits (785), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|195953354|ref|YP_002121644.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
 gi|229576658|sp|B4U955.1|RF1_HYDS0 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|195932966|gb|ACG57666.1| peptide chain release factor 1 [Hydrogenobaculum sp. Y04AAS1]
          Length = 356

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 147/300 (49%), Positives = 214/300 (71%), Gaps = 5/300 (1%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           K+I+  K L+    +DKD+ ++A +EL     +  + +  L+  L PKD  D ++ ILE+
Sbjct: 61  KDIEDTKELL----KDKDLRELAEKELENLNTKLLQKEKELINVLTPKDANDSKNVILEI 116

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           RAG GGEEA+LFA D+ +MY+RY+++KGWKF ++   ++ L GYKE   +I G  VY  L
Sbjct: 117 RAGAGGEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVYSHL 176

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP+TE  GR+HTS ++VA+LP+ADE DV +  +DLRI+T+R+ G+GGQ+
Sbjct: 177 KYESGVHRVQRVPITESGGRIHTSTITVAVLPEADETDVVINPQDLRIETFRASGAGGQY 236

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT SAVR+THIPTG++IS QDERSQ  NK KA+++L A+L +    +      K R E
Sbjct: 237 VNTTESAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETDKERKE 296

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+G+G+RSE+IRTYNF Q RVTDHR+ +T H + D+++G +LD  I +L  ++  + +AS
Sbjct: 297 QVGTGERSEKIRTYNFSQNRVTDHRINLTLHKLQDVLDG-DLDDIISSLQAKELEEKLAS 355


>gi|114569197|ref|YP_755877.1| peptide chain release factor 1 [Maricaulis maris MCS10]
 gi|119361557|sp|Q0ARZ8.1|RF1_MARMM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|114339659|gb|ABI64939.1| bacterial peptide chain release factor 1 (bRF-1) [Maricaulis maris
           MCS10]
          Length = 357

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 221/316 (69%), Gaps = 9/316 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSE--------DKDMLDMATEELCLAIDEEKRLQSLLLKSL 56
           +EL+   ++ + LKS   E +E        D +M +MA EE     +    L+  +   L
Sbjct: 39  AELKPVAEKANALKSARAELAELAEMMEGDDAEMAEMAREEFYALKERLPELEHAMSLML 98

Query: 57  LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
           LPKD  D  + ++E+RAGTGG+EA++FA +++ MY+RY+Q +GW +E+V  +E +  GYK
Sbjct: 99  LPKDKDDSANAMIEIRAGTGGDEAAIFAGNLYGMYQRYAQLQGWSWELVSASEGEHGGYK 158

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           E  AAISG GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VAI+PQ +++D+ L   D
Sbjct: 159 EVVAAISGNGVFGRLKFESGVHRVQRVPATESQGRIHTSAATVAIMPQPEDIDIELDMGD 218

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +R+DT R+ G+GGQH N T+SAVR+THIPTG+ +  Q E+SQH N+A+A ++L AKLY+M
Sbjct: 219 VRVDTMRASGAGGQHVNKTDSAVRMTHIPTGLVVVCQ-EKSQHQNRARAQEILKAKLYDM 277

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
           +R   +  R+  R  QIGSGDRSERIRTYN+PQGRV+DHR+ +T + + D++ G+ LD  
Sbjct: 278 QREAANAERAAERKGQIGSGDRSERIRTYNYPQGRVSDHRINLTLYKLDDIVAGDGLDEV 337

Query: 297 IDALLLQQEMDAIASF 312
           + AL+ + +   +A+ 
Sbjct: 338 VAALIAEDQAARLAAL 353


>gi|424030757|ref|ZP_17770230.1| peptide chain release factor 1 [Vibrio cholerae HENC-01]
 gi|424042632|ref|ZP_17780325.1| peptide chain release factor 1 [Vibrio cholerae HENC-02]
 gi|408881038|gb|EKM19949.1| peptide chain release factor 1 [Vibrio cholerae HENC-01]
 gi|408887922|gb|EKM26411.1| peptide chain release factor 1 [Vibrio cholerae HENC-02]
          Length = 362

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKETIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|407798052|ref|ZP_11144965.1| peptide chain release factor 1 [Oceaniovalibus guishaninsula
           JLT2003]
 gi|407059889|gb|EKE45812.1| peptide chain release factor 1 [Oceaniovalibus guishaninsula
           JLT2003]
          Length = 349

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 153/304 (50%), Positives = 218/304 (71%), Gaps = 10/304 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKS-------LL 57
           SELR    EI+  + L  + ++ + +L    E   LA DE  +L++LL ++       LL
Sbjct: 36  SELRPIVAEIERYRGLGDQIAQAEALLS-DPEMRALAEDELTQLRTLLAEAEETLRLALL 94

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD AD R  ILE+R GTGGEEA+LFA D+ +MY R++  +GW+F+V+    ++L G KE
Sbjct: 95  PKDAADARPAILEIRPGTGGEEAALFAADLMRMYMRFADAQGWRFDVIEQQTTELGGLKE 154

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A + G GV+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VDV++   D+
Sbjct: 155 LVANVRGDGVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEDVDVQIDPADI 214

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDT R+ G+GGQH NTT+SAVR+TH+P+G+ ++   E+SQH N+  A++VL A+L++ME
Sbjct: 215 RIDTMRASGAGGQHVNTTDSAVRITHVPSGIVVT-SSEKSQHRNREIAMQVLRARLFDME 273

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           RSR+   RS  R  Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +L   I
Sbjct: 274 RSRVEGERSAARKGQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDQVMQG-DLGEVI 332

Query: 298 DALL 301
           DAL+
Sbjct: 333 DALV 336


>gi|206558779|ref|YP_002229539.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
 gi|421863976|ref|ZP_16295664.1| Peptide chain release factor 1 [Burkholderia cenocepacia H111]
 gi|238693068|sp|B4E6U6.1|RF1_BURCJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|198034816|emb|CAR50684.1| peptide chain release factor 1 [Burkholderia cenocepacia J2315]
 gi|358075929|emb|CCE46542.1| Peptide chain release factor 1 [Burkholderia cenocepacia H111]
          Length = 360

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +E+  A +   RL++ L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEAIMDG-DLDELIGALVTEHQAELLASLG 357


>gi|269792432|ref|YP_003317336.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269100067|gb|ACZ19054.1| peptide chain release factor 1 [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 357

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 139/275 (50%), Positives = 206/275 (74%), Gaps = 1/275 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M  +A EE+    D    L+  L   LLP+D  D ++ I+E+RAG GG+EA+LFA 
Sbjct: 70  DDEEMRQLAKEEVQRLSDMLPGLEQDLKVLLLPRDPNDHKNVIIEIRAGAGGDEAALFAA 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++++GW++E++ + E+ + GYKE    + G G Y KLKFESG+HRVQR+P+
Sbjct: 130 DLFRMYTRYTERQGWRYEIMEMNETGIGGYKEVVFLVKGEGAYSKLKFESGVHRVQRIPV 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           TE SGR+HTS  +VA+LP+A++VDV++R EDL+IDTYR+ G+GGQ+ N T+SAVR+THIP
Sbjct: 190 TEASGRIHTSTATVAVLPEAEDVDVQIRPEDLKIDTYRASGAGGQYVNMTDSAVRITHIP 249

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ ++ QDERSQ  N+AKA+++L A+LY+ E  +     +  R  Q+G+GDRSERIRTY
Sbjct: 250 TGLVVTCQDERSQLKNRAKAMQLLRARLYDQELQKQQAQMAAERKGQVGTGDRSERIRTY 309

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
           N+PQ R+TDHR+G T + +  +++G +L   I+AL
Sbjct: 310 NYPQNRLTDHRIGFTLYKLDQVLDG-DLYELIEAL 343


>gi|302186444|ref|ZP_07263117.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           642]
          Length = 360

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L ++L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYAQLLRVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGESVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|343517491|ref|ZP_08754493.1| peptide chain release factor 1 [Vibrio sp. N418]
 gi|342793269|gb|EGU29072.1| peptide chain release factor 1 [Vibrio sp. N418]
          Length = 362

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKDAKESIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F+MY ++++KKGW+ EV+   ES+  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 NLFRMYSKFAEKKGWRVEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA++VL A++ + E++R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMQVLAARIVQAEQARRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLASLIDPVIQEHQADQLAALA 359


>gi|400406570|ref|YP_006589318.1| peptide chain release factor 1 [secondary endosymbiont of
           Heteropsylla cubana]
 gi|400364823|gb|AFP85890.1| peptide chain release factor 1 [secondary endosymbiont of
           Heteropsylla cubana]
          Length = 360

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/314 (47%), Positives = 211/314 (67%), Gaps = 2/314 (0%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
           I++   K K++    ++I +   D +M D+A EE+    + ++ L+  L   LL +D  D
Sbjct: 48  ITQCFQKWKQLKTDINIITDLLHDLEMRDIAQEEILKLKNNQQELEKELQMLLLSRDPND 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER C LE+RAGTGG EA+LFA  +F+MY RY++K+GWK +++   + +  G+KE  A IS
Sbjct: 108 ERGCFLEIRAGTGGNEAALFAGLLFRMYNRYAEKQGWKIDIINANDGEHGGFKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTY 182
             G YG LKFESG HRVQRVP TE  GRVHTS+ ++A++P+  E D+ ++   DLRIDT+
Sbjct: 168 HSGAYGLLKFESGGHRVQRVPNTESQGRVHTSSCTIAVMPEIPEADLPKIHTNDLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A+L   E  R  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGLVVECQDERSQHKNKAKALGVLSARLQANEIQRRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              S  R   +GSGDR +RIRTYNFPQGR+TDHR+G+T H + + +EG+ LD+ I  +L 
Sbjct: 288 QQESSTRRNLLGSGDRCDRIRTYNFPQGRITDHRIGLTIHRLDEFIEGK-LDMLIKPILQ 346

Query: 303 QQEMDAIASFGSTQ 316
           +   + +     T+
Sbjct: 347 EYHTNQLTLLSETK 360


>gi|107024140|ref|YP_622467.1| peptide chain release factor 1 [Burkholderia cenocepacia AU 1054]
 gi|116688534|ref|YP_834157.1| peptide chain release factor 1 [Burkholderia cenocepacia HI2424]
 gi|170731835|ref|YP_001763782.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
 gi|254246465|ref|ZP_04939786.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|119361514|sp|Q1BSB1.1|RF1_BURCA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223531|sp|A0K437.1|RF1_BURCH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688554|sp|B1JUS4.1|RF1_BURCC RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|105894329|gb|ABF77494.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia AU 1054]
 gi|116646623|gb|ABK07264.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           cenocepacia HI2424]
 gi|124871241|gb|EAY62957.1| Peptide chain release factor 1 [Burkholderia cenocepacia PC184]
 gi|169815077|gb|ACA89660.1| peptide chain release factor 1 [Burkholderia cenocepacia MC0-3]
          Length = 360

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 208/292 (71%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +E+  A +   RL++ L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THIPTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THIPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEAIMDG-DLDELIGALVTEHQAELLASLG 357


>gi|15611143|ref|NP_222794.1| peptide chain release factor 1 [Helicobacter pylori J99]
 gi|7388059|sp|Q9ZMZ0.1|RF1_HELPJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|4154581|gb|AAD05656.1| PEPTIDE CHAIN RELEASE FACTOR 1 [Helicobacter pylori J99]
          Length = 352

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|126665163|ref|ZP_01736146.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
 gi|126630533|gb|EBA01148.1| peptide chain release factor 1 [Marinobacter sp. ELB17]
          Length = 364

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 143/302 (47%), Positives = 213/302 (70%), Gaps = 2/302 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           +I+  + L  +   D DM +MA EEL  A    + L + L   +LPKD  D ++  LEVR
Sbjct: 61  DINEARELSKDGDADADMREMAEEELHTAQQASEELDAELQGLMLPKDPNDGKNVFLEVR 120

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG+EA++FA D+F+MY R+++++ W+ E++  +E +  GYKE  A ++G GVYG LK
Sbjct: 121 AGTGGDEAAIFAGDLFRMYSRFAERRRWQVEILSASEGEHGGYKEVIARVAGSGVYGTLK 180

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQH 191
           FESG+HRVQRVP TE  GR+HTSA +VA++P+ADE + V +   DLR+DT+R+ G+GGQH
Sbjct: 181 FESGVHRVQRVPETESQGRIHTSACTVAVMPEADEAEAVEINKGDLRVDTFRASGAGGQH 240

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            N T+SA+R+TH+P+G+ +  Q+ERSQH N+AKA+ +L ++L  +E  R H S ++ R  
Sbjct: 241 VNKTDSAIRITHLPSGLVVECQEERSQHKNRAKAMSLLASRLQNIETERAHQSMAETRKS 300

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
            +GSGDRSERIRTYNFPQ RVTDHR+ +T + + +++ G +LD  +  LL + + + +A+
Sbjct: 301 LVGSGDRSERIRTYNFPQSRVTDHRINLTLYKLDEVIAG-DLDSVVKPLLQEHQAELLAA 359

Query: 312 FG 313
             
Sbjct: 360 LA 361


>gi|445064894|ref|ZP_21376850.1| peptide chain release factor 1 [Brachyspira hampsonii 30599]
 gi|444503725|gb|ELV04531.1| peptide chain release factor 1 [Brachyspira hampsonii 30599]
          Length = 358

 Score =  306 bits (784), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 150/307 (48%), Positives = 214/307 (69%), Gaps = 1/307 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           +L+T  KEI+    +I     DK++ DMA  E+     +++ + + L   LLPKD  D +
Sbjct: 51  KLKTVLKEIEESNEMINNTDTDKELKDMALLEIEELNQKKEDIINGLRLLLLPKDKNDGK 110

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + I+E+R GTGG+E++LF  D+F+MY R+ ++   K E++  + ++L GYKE   ++SG 
Sbjct: 111 NIIVEIRVGTGGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGK 170

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
             Y  LKFESG HRVQR+P TE  GR+HTSA +VA++P+A E DV +++ED+R+D +RS 
Sbjct: 171 DAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRSS 230

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL A++YE E +      
Sbjct: 231 GPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKE 290

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +K R EQIGSGDRSERIRTYNFPQ RVTDHR+ +T + +   M+GE  +I  DAL  +++
Sbjct: 291 AKERREQIGSGDRSERIRTYNFPQNRVTDHRINLTLYKLDRFMDGEITEI-TDALFKKEQ 349

Query: 306 MDAIASF 312
            D +AS+
Sbjct: 350 EDMLASY 356


>gi|56476056|ref|YP_157645.1| peptide chain release factor 1 [Aromatoleum aromaticum EbN1]
 gi|81598974|sp|Q5P7G7.1|RF1_AZOSE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|56312099|emb|CAI06744.1| peptide chain release factor 1 (RF-1) [Aromatoleum aromaticum EbN1]
          Length = 359

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M ++A  EL       + L++ L  +LLP D +DER+  LEVRAGTGG+EASLFA D
Sbjct: 71  DAEMRELAESELETGAVRLQALEAELQCALLPCDPSDERNLFLEVRAGTGGDEASLFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY++++ WK E+V  + SDL GYKE    I+G G Y KLKFESG HRVQR+P+T
Sbjct: 131 LLRMYTRYAERQRWKVEIVSSSPSDLGGYKEVILRIAGAGAYSKLKFESGGHRVQRIPVT 190

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADEV+ V +   DLRIDT+R+ G+GGQH N T+SAVR+TH+P
Sbjct: 191 ETQGRIHTSACTVAVMPEADEVEAVNINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH N+A+A+ VL A++ + +        +  R   +GSGDRSERIRTY
Sbjct: 251 TGIVVECQDDRSQHRNRAQAMSVLAARIQDRQLREQQAREAATRKSLVGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQGRVTDHR+ +T + +  +M+G +LD  +DAL  + + D +A+ G
Sbjct: 311 NYPQGRVTDHRINLTLYKLDAVMQG-DLDELVDALTREHQADQLAALG 357


>gi|317121004|ref|YP_004101007.1| peptide chain release factor 1 (bRF-1) [Thermaerobacter marianensis
           DSM 12885]
 gi|315590984|gb|ADU50280.1| bacterial peptide chain release factor 1 (bRF-1) [Thermaerobacter
           marianensis DSM 12885]
          Length = 381

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 146/293 (49%), Positives = 214/293 (73%), Gaps = 2/293 (0%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           +++  ++L+ E ++D D     T E+     E +RL+  L   LLP+D  D+RD I+E+R
Sbjct: 82  DLEAARALLRE-TDDADEHAYLTAEVERLEAERQRLERTLRSLLLPRDPRDQRDVIMEIR 140

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGGEEA+LFA D+F+MY+RY++++GW+ EV+  TESDL G+KE   A+SG G + +LK
Sbjct: 141 AGTGGEEAALFAGDLFRMYQRYAERQGWRTEVMAATESDLGGFKEVVFAVSGRGAFSRLK 200

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
            ESG+HRVQRVP+TE +GR+HTS  +VA+LP+A+EV+V++  +DL IDT+ + G GGQH 
Sbjct: 201 HESGVHRVQRVPVTEAAGRIHTSTATVAVLPEAEEVEVQIDPDDLEIDTFAASGPGGQHV 260

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
           N T SAVR+TH PTG+ ++ QDERSQH N+A+A+K+L A+L +    R     S+ R  Q
Sbjct: 261 NKTESAVRITHKPTGIVVTCQDERSQHKNRARAMKILRARLLDYYTRRQQEELSQQRRSQ 320

Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +G+G+RSE+IRTYNF + RVTDHR+G+T + + ++M+G +LD  +DAL    E
Sbjct: 321 VGTGERSEKIRTYNFRENRVTDHRIGLTLYRLQEIMDG-DLDELLDALAAHDE 372


>gi|156973549|ref|YP_001444456.1| peptide chain release factor 1 [Vibrio harveyi ATCC BAA-1116]
 gi|166223617|sp|A7MY68.1|RF1_VIBHB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|156525143|gb|ABU70229.1| hypothetical protein VIBHAR_01250 [Vibrio harveyi ATCC BAA-1116]
          Length = 362

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKEAIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|167564255|ref|ZP_02357171.1| peptide chain release factor 1 [Burkholderia oklahomensis EO147]
 gi|167571406|ref|ZP_02364280.1| peptide chain release factor 1 [Burkholderia oklahomensis C6786]
          Length = 360

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 206/291 (70%), Gaps = 2/291 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D  M D A +EL  A +   RL + L   LLPKD  DER+  +E+RAGTGG+E++LFA D
Sbjct: 71  DASMRDFAEDELRGARERMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQRVP T
Sbjct: 131 LLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRVTHIP
Sbjct: 191 ETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSERIRTY
Sbjct: 251 TGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           NFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 311 NFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|320354565|ref|YP_004195904.1| peptide chain release factor 1 (bRF-1) [Desulfobulbus propionicus
           DSM 2032]
 gi|320123067|gb|ADW18613.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfobulbus
           propionicus DSM 2032]
          Length = 356

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 151/300 (50%), Positives = 213/300 (71%), Gaps = 3/300 (1%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           +I G + LI    +D D++++A  E+   + ++  L+  +   LLPKD  D+++  LE+R
Sbjct: 57  QIAGNQELIRTEQDDPDLVELAKAEIEELVVKQTELEQAIRIRLLPKDPNDDKNIFLEIR 116

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
           AGTGG+EA+LF  D+F+MY RY++ +GWK EV+      + G+KE  A +SG  VY +LK
Sbjct: 117 AGTGGDEAALFVADLFRMYSRYAEMQGWKVEVMSSNPIGIGGFKELIALVSGTQVYSRLK 176

Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
           +ESG+HRVQRVP TE  GR+HTSAV+VAI+P+A+EVD+ +   +L+ D YRS G GGQ  
Sbjct: 177 YESGVHRVQRVPDTETQGRIHTSAVTVAIIPEAEEVDLHIEPNELKFDVYRSSGPGGQSV 236

Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE-MERSRIHLSRSKLRSE 251
           NTT+SAVRVTH+PTG+ ++ QDE+SQH NKAKAL+VL A+L + ME+ R H   S+ R  
Sbjct: 237 NTTDSAVRVTHLPTGLVVTCQDEKSQHKNKAKALQVLRARLLDKMEQER-HDRISEERKS 295

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + +  +M G  LD  I  ++   + +A+ S
Sbjct: 296 QVGSGDRSERIRTYNFPQGRVTDHRINLTLYRLDQVMAG-MLDDIILPIITHYQTEALKS 354


>gi|402702451|ref|ZP_10850430.1| peptide chain release factor 1 [Pseudomonas fragi A22]
          Length = 360

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 148/304 (48%), Positives = 213/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A +    L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKD--NDPDMREMAVEEVREAKERLLELEQDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++FA D+F+MY RY++++GWK E++     +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFAGDLFRMYSRYAERRGWKLEILSENSGEHGGYKEVIARVEGENVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGVHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPSDLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ D++ G  +D  I+ LL + + D +
Sbjct: 297 KSLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDDVLAG-GVDAVIEPLLAEFQADQL 355

Query: 310 ASFG 313
            + G
Sbjct: 356 TALG 359


>gi|373107023|ref|ZP_09521323.1| peptide chain release factor 1 [Stomatobaculum longum]
 gi|371651962|gb|EHO17388.1| peptide chain release factor 1 [Stomatobaculum longum]
          Length = 369

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 211/294 (71%), Gaps = 3/294 (1%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           R K++E + L  L  E   D+++  +A EEL  A  E+ R  + L + LLPKD  DE++ 
Sbjct: 54  RAKEQEAEALSLL--ETERDEELRQLAKEELQEARQEKARRAAELKELLLPKDPNDEKNV 111

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGV 127
           +LE+RAG GG+EA+LFA ++F+MY +Y++K+GWK E+  + ES L G KE  A + G G 
Sbjct: 112 VLEIRAGAGGDEAALFAAELFRMYRQYAEKRGWKVEIDDIHESGLGGIKEVIATVRGQGA 171

Query: 128 YGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGS 187
           + +LKFESG+HRVQRVP TE  GR+HTS  SVA++P+A+EVDV+L  +D+RID  R+ G+
Sbjct: 172 FSRLKFESGVHRVQRVPATEAGGRIHTSTASVAVMPEAEEVDVQLDMKDVRIDVMRASGN 231

Query: 188 GGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSK 247
           GGQ  NTT+SAVR+TH P+G+ I  Q E+SQ  NK KA ++L +KLY +E  R     ++
Sbjct: 232 GGQCVNTTDSAVRLTHYPSGIVIYSQTEKSQLQNKEKAFRLLRSKLYALELERRQAETAE 291

Query: 248 LRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
            R  QIG+GDRSE+IRTYNFPQGRVTDHR+ +T ++I  +M+G +LD  +DALL
Sbjct: 292 ARRAQIGTGDRSEKIRTYNFPQGRVTDHRIKLTLYSIDRVMDG-DLDEILDALL 344


>gi|374261664|ref|ZP_09620242.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
 gi|363537758|gb|EHL31174.1| peptide chain release factor 1 [Legionella drancourtii LLAP12]
          Length = 351

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 214/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q  +  L+ ++    +D+++  MA +EL  A  +   L   L   L+PKD  DER+  LE
Sbjct: 48  QNNLASLQEML--AGDDQELATMAEDELEDAQKQIDELDEQLQWHLIPKDPDDERNIYLE 105

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           VRAGTGG+EA++FA D+++MY RY++ +GW+ E++  +  +  GYKE  A ISG  VY +
Sbjct: 106 VRAGTGGDEAAIFAGDLYRMYSRYAENQGWQLELISASHGEHGGYKEIIARISGNAVYSQ 165

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GRVHTSA +VA++P+ +E+D +++  +DLRIDTYRS G+GG
Sbjct: 166 LKFESGAHRVQRVPDTESQGRVHTSACTVAVMPEVEEIDDIQINTDDLRIDTYRSSGAGG 225

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+THIPTG+ +  QDERSQH N+AKA+ +L  +L + E+S+    +++ R
Sbjct: 226 QHVNKTDSAIRITHIPTGVVVECQDERSQHKNRAKAMSLLKTRLLDAEQSKQKKEQAQTR 285

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYN+PQGR+TDHR+ +T + + D+MEG NL + ++ L  +   + +
Sbjct: 286 KSLVGSGDRSERIRTYNYPQGRLTDHRINLTIYQLGDVMEG-NLALVVEPLKREYHAELL 344

Query: 310 ASFG 313
           A  G
Sbjct: 345 AELG 348


>gi|189424095|ref|YP_001951272.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
 gi|238692126|sp|B3E628.1|RF1_GEOLS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|189420354|gb|ACD94752.1| peptide chain release factor 1 [Geobacter lovleyi SZ]
          Length = 355

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 153/309 (49%), Positives = 217/309 (70%), Gaps = 2/309 (0%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           LI   R  +K +D L+    E   D +M +MA EE+     E++RL + +   LLPKD  
Sbjct: 44  LIEAFRRYKKVLDELEE-NQELLADPEMKEMAEEEISRLSQEKERLDAEIKILLLPKDPN 102

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D RD ILE+RAGTGG+E++LF+ D+F+MY R+++K  WK E++  +ES+  GYKE  A+I
Sbjct: 103 DSRDVILEIRAGTGGDESALFSGDLFRMYSRFAEKNRWKVEMLSCSESERGGYKEVIASI 162

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G  VY KLK+ESG HRVQRVP TE  GR+HTSA +VAI+ +A++VD+ +   DL+ID Y
Sbjct: 163 EGQDVYAKLKYESGTHRVQRVPETEAQGRIHTSACTVAIMAEAEDVDIDINPADLKIDVY 222

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SAVR+THIPTG  ++ Q+ERSQ  N+AKA+KVL  ++ +  +   +
Sbjct: 223 RSSGAGGQHVNTTDSAVRITHIPTGTVVACQEERSQIKNRAKAMKVLKTRILDTIQQEQN 282

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              +  R +Q+GSGDRSERIRTYNFPQGR+TDHR+G+T + +  +M G +++   DAL  
Sbjct: 283 AKLAADRKQQVGSGDRSERIRTYNFPQGRMTDHRIGLTLYRLDSIMAG-DIEEITDALRA 341

Query: 303 QQEMDAIAS 311
             +M+A+ +
Sbjct: 342 HYQMEALKA 350


>gi|420498637|ref|ZP_14997194.1| peptide chain release factor 1 [Helicobacter pylori Hp P-26]
 gi|393152616|gb|EJC52912.1| peptide chain release factor 1 [Helicobacter pylori Hp P-26]
          Length = 352

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|148826783|ref|YP_001291536.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
 gi|148718025|gb|ABQ99152.1| peptide chain release factor 1 [Haemophilus influenzae PittGG]
          Length = 361

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|108562503|ref|YP_626819.1| peptide chain release factor 1 [Helicobacter pylori HPAG1]
 gi|119361549|sp|Q1CV77.1|RF1_HELPH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|107836276|gb|ABF84145.1| peptide chain release factor RF-1 [Helicobacter pylori HPAG1]
          Length = 352

 Score =  306 bits (784), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGNEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K W+ E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWRVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|345299600|ref|YP_004828958.1| peptide chain release factor 1 [Enterobacter asburiae LF7a]
 gi|345093537|gb|AEN65173.1| Peptide chain release factor 1 [Enterobacter asburiae LF7a]
          Length = 360

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 150/310 (48%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            ++ R  Q++I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  D
Sbjct: 52  FTDWRQVQEDIETAQMML----DDPEMREMAQEELQEAKARSEEMEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ER+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  G+KE  A IS
Sbjct: 108 ERNAFVEVRAGTGGDEAALFAGDLFRMYSRYAETRRWRVEIMSANEGEHGGFKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTY 182
           G GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+
Sbjct: 168 GDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E ++  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ 
Sbjct: 288 QAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +A+ 
Sbjct: 347 EYQADQLAAL 356


>gi|420454622|ref|ZP_14953452.1| peptide chain release factor 1 [Helicobacter pylori Hp A-14]
 gi|393072972|gb|EJB73746.1| peptide chain release factor 1 [Helicobacter pylori Hp A-14]
          Length = 352

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKACLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|374621851|ref|ZP_09694380.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
 gi|373940981|gb|EHQ51526.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
          Length = 360

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 150/291 (51%), Positives = 206/291 (70%), Gaps = 8/291 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKDDADERDCILEVRAGTGGEEASLF 83
           D D+  MA EE+        RL+SL   L + L+PKD  DE +  LE+RAGTGG+EA++F
Sbjct: 73  DPDLRAMAEEEIPAV---SSRLESLELDLQRHLIPKDPHDENNTFLEIRAGTGGDEAAIF 129

Query: 84  AVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRV 143
           A D+F+MY RY++ +GW+ E++  +E +  GY+E  A I G GVY +LKFESG HRVQRV
Sbjct: 130 AGDLFRMYSRYAETRGWQVELLSESEGEHGGYREVIARIIGRGVYSRLKFESGAHRVQRV 189

Query: 144 PLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           P TE  GR+HTSA +VA++P+ DE+++  +   DLRIDTYR+ G+GGQH N T+SAVR+T
Sbjct: 190 PDTESQGRIHTSAATVAVMPEPDEMEIPEINPADLRIDTYRASGAGGQHVNRTDSAVRLT 249

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PTG+ +  QDERSQH NKA+A+ +L AKL E E +R    +S  R   +GSGDRSERI
Sbjct: 250 HLPTGLVVECQDERSQHKNKARAMSLLAAKLIEREETRRFQEQSATRKSLVGSGDRSERI 309

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYNFPQGRVTDHR+ +T + +  +M G +LD  ID L+ + + + +A+  
Sbjct: 310 RTYNFPQGRVTDHRINLTLYKLEAIMAG-DLDPVIDPLVNEHQAEQLAALA 359


>gi|404494363|ref|YP_006718469.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
 gi|119361572|sp|Q3A129.1|RF1_PELCD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|77546366|gb|ABA89928.1| peptide chain release factor 1 [Pelobacter carbinolicus DSM 2380]
          Length = 356

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 151/306 (49%), Positives = 215/306 (70%), Gaps = 3/306 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E +   ++I+G + L+ +   D +M +MA  EL       + L   L   LLPKD  D++
Sbjct: 51  EYKRVSEDIEGNRELLQDS--DPEMREMAKAELPELEAHREELAQQLKVLLLPKDPNDDK 108

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + ILE+RAGTGG+EA+LFA D+F+MY R+++ +GWK E + V++S+  G+KE  A ISG 
Sbjct: 109 NVILEIRAGTGGDEAALFAGDLFRMYSRFAEGQGWKVETMSVSDSEAGGFKEIIAMISGN 168

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
            VY +LK+ESG HRVQRVP TE  GR+HTSA +VA+LP+A++VDV +   DLRID YR+ 
Sbjct: 169 RVYSQLKYESGTHRVQRVPETEAQGRIHTSACTVAVLPEAEDVDVDIDPTDLRIDVYRAS 228

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQH N T SAVR+TH+PTG+ +S QDE+SQH NKAKA+KVL +++ +   +      
Sbjct: 229 GAGGQHVNKTESAVRITHVPTGVVVSCQDEKSQHKNKAKAMKVLKSRILDQVMADQQAQM 288

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +  R  Q+GSGDRS+RIRTYNFPQGR TDHR+G+T + +  +M+G NL   ++ L L  +
Sbjct: 289 AADRKSQVGSGDRSQRIRTYNFPQGRCTDHRIGLTLYRLEGIMQG-NLSELVEPLTLHYQ 347

Query: 306 MDAIAS 311
            +A+A+
Sbjct: 348 SEAMAA 353


>gi|422648190|ref|ZP_16711314.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
 gi|330961728|gb|EGH61988.1| peptide chain release factor 1 [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 360

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  +L   Q +++G ++L+ +   D DM +MA EE+    ++   L++ L + LLPKD  
Sbjct: 51  LYKQLLKVQADLEGAQALLKDS--DPDMREMAVEEVRETKEQLVDLEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|145632952|ref|ZP_01788685.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
 gi|144986608|gb|EDJ93174.1| peptide chain release factor 1 [Haemophilus influenzae 3655]
          Length = 361

 Score =  306 bits (784), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|407699633|ref|YP_006824420.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Black
           Sea 11']
 gi|407248780|gb|AFT77965.1| peptide chain release factor 1 [Alteromonas macleodii str. 'Black
           Sea 11']
          Length = 361

 Score =  306 bits (783), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL++ L   LLPKD  D+ +C LE+RAG GG+EA++FA 
Sbjct: 72  DDAEMREMAQEEMKEAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ +GW+ E+V   E +  GYKE  A +SG GVYG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA+LP+  E   + +   +LRIDT+R+ G+GGQH N T+SA+R+TH+
Sbjct: 192 TESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH N+AKA+ VL A+L ++E  +     +  R   +GSGDRSERIRT
Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLVGSGDRSERIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + +++EG +L   ID +L + + D +AS 
Sbjct: 312 YNFPQGRVTDHRINLTIYRLDEVVEG-DLKQLIDPILQEHQADLLASL 358


>gi|210134282|ref|YP_002300721.1| peptide chain release factor 1 [Helicobacter pylori P12]
 gi|238058714|sp|B6JPI0.1|RF1_HELP2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|210132250|gb|ACJ07241.1| peptide chain release factor RF-1 [Helicobacter pylori P12]
          Length = 352

 Score =  306 bits (783), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   +LD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLI 344


>gi|422619385|ref|ZP_16688075.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
           str. M301072]
 gi|422631822|ref|ZP_16697002.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|443645394|ref|ZP_21129244.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B64]
 gi|330899755|gb|EGH31174.1| peptide chain release factor 1 [Pseudomonas syringae pv. japonica
           str. M301072]
 gi|330941684|gb|EGH44459.1| peptide chain release factor 1 [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|443285411|gb|ELS44416.1| Peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B64]
          Length = 360

 Score =  306 bits (783), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L ++L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYAQLLRVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|66044202|ref|YP_234043.1| peptide chain release factor 1 [Pseudomonas syringae pv. syringae
           B728a]
 gi|422675092|ref|ZP_16734440.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
           str. M302273]
 gi|440744588|ref|ZP_20923891.1| peptide chain release factor 1 [Pseudomonas syringae BRIP39023]
 gi|75503325|sp|Q4ZXW7.1|RF1_PSEU2 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|63254909|gb|AAY36005.1| bacterial peptide chain release factor 1 (bRF-1) [Pseudomonas
           syringae pv. syringae B728a]
 gi|330972814|gb|EGH72880.1| peptide chain release factor 1 [Pseudomonas syringae pv. aceris
           str. M302273]
 gi|440374006|gb|ELQ10749.1| peptide chain release factor 1 [Pseudomonas syringae BRIP39023]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L ++L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYAQLLRVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|213967224|ref|ZP_03395373.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
 gi|301381040|ref|ZP_07229458.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302060378|ref|ZP_07251919.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           K40]
 gi|302134868|ref|ZP_07260858.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|422297078|ref|ZP_16384722.1| peptide chain release factor 1 [Pseudomonas avellanae BPIC 631]
 gi|213928066|gb|EEB61612.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato T1]
 gi|407991602|gb|EKG33422.1| peptide chain release factor 1 [Pseudomonas avellanae BPIC 631]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 217/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  +L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYKQLARVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|326423672|ref|NP_759262.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
 gi|32171537|sp|Q8DFF9.2|RF1_VIBVU RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46576703|sp|Q7MMY6.2|RF1_VIBVY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|319999027|gb|AAO08789.2| peptide chain release factor 1 [Vibrio vulnificus CMCP6]
          Length = 362

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A    + L + L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY ++++K+GW+ EV+   E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAI+P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E ++     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + +S++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLSEVMEG-DLQSLIDPVIQEHQADQLAALA 359


>gi|387891957|ref|YP_006322254.1| peptide chain release factor 1 [Pseudomonas fluorescens A506]
 gi|387160126|gb|AFJ55325.1| peptide chain release factor 1 [Pseudomonas fluorescens A506]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/304 (48%), Positives = 215/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A D+   L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKDKLAELEGDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|257457982|ref|ZP_05623141.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
 gi|257444695|gb|EEV19779.1| peptide chain release factor 1 [Treponema vincentii ATCC 35580]
          Length = 355

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/292 (49%), Positives = 218/292 (74%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           ++EI   ++++ E + D ++ +MA EEL     + ++ ++ L   L+P D  +E++ I+E
Sbjct: 55  EQEIIQTRAMMQEET-DHELKEMAREELHNLEAQLEQSENNLKVLLIPPDPLEEKNIIME 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGGEEA+LFA D+ KMY  Y++ K WK+E++   E++L G+KE + +ISG  VYG 
Sbjct: 114 IRGGTGGEEAALFAADLLKMYTHYAELKNWKYEILSSNETELGGFKEVTLSISGKYVYGS 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ ++ EDLRID  R+GG GGQ
Sbjct: 174 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIVIKQEDLRIDVMRAGGPGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTG+ +  QDE+SQ  NKAKA++VL ++LY+ME ++    R++ R 
Sbjct: 234 CVNTTDSAVRITHIPTGLVVICQDEKSQIKNKAKAMRVLRSRLYDMEEAKKQSERAEDRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYN+PQ RVTDHR+ +T + +  +M+G +L+  ++AL +
Sbjct: 294 NQVGSGDRSERIRTYNYPQNRVTDHRINLTLYKLDTIMQG-DLNEIVEALCI 344


>gi|385221579|ref|YP_005770712.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7]
 gi|317010358|gb|ADU84105.1| peptide chain release factor 1 [Helicobacter pylori SouthAfrica7]
          Length = 352

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL     ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKALEIKKSELEATIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSER+
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERV 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|423097283|ref|ZP_17085079.1| peptide chain release factor 1 [Pseudomonas fluorescens Q2-87]
 gi|397884652|gb|EJL01135.1| peptide chain release factor 1 [Pseudomonas fluorescens Q2-87]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/304 (48%), Positives = 216/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L+S L + LLPKD  D R+  LE
Sbjct: 59  QDDLEGAQALLKDS--DPDMREMAVEEVREAKEQLVELESSLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMAWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|384209914|ref|YP_005595634.1| peptide chain release factor 1 [Brachyspira intermedia PWS/A]
 gi|343387564|gb|AEM23054.1| peptide chain release factor 1 [Brachyspira intermedia PWS/A]
          Length = 350

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/306 (49%), Positives = 212/306 (69%), Gaps = 1/306 (0%)

Query: 7   LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERD 66
           L+   KEID    +I     DK++ DMA  E+     +++ + + L   LLPKD  D ++
Sbjct: 44  LKVVLKEIDESNEMINNPDTDKELKDMALLEIEELNQKKEDIINGLRLLLLPKDKNDGKN 103

Query: 67  CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
            I+E+R GTGG+E++LF  D+F+MY R+ ++   K E++  + ++L GYKE   ++SG  
Sbjct: 104 IIVEIRVGTGGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGKD 163

Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
            Y  LKFESG HRVQR+P TE  GR+HTSA +VA++P+A E DV +++ED+R+D +RS G
Sbjct: 164 AYRTLKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRSSG 223

Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRS 246
            GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL A++YE E +      +
Sbjct: 224 PGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKEA 283

Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEM 306
           K R EQIGSGDRSERIRTYNFPQ RVTDHR+ +T + +   M+GE  +I  DAL  +++ 
Sbjct: 284 KERREQIGSGDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEI-TDALFKKEQE 342

Query: 307 DAIASF 312
           D +AS+
Sbjct: 343 DMLASY 348


>gi|392407018|ref|YP_006443626.1| peptide chain release factor 1 [Anaerobaculum mobile DSM 13181]
 gi|390620154|gb|AFM21301.1| peptide chain release factor 1 [Anaerobaculum mobile DSM 13181]
          Length = 358

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 139/257 (54%), Positives = 193/257 (75%), Gaps = 1/257 (0%)

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           PKD  D+R  I+E+RAG GGEEA+LFA D+++MY RY+++KGWK E++   E+ + GYKE
Sbjct: 103 PKDPNDDRSVIVEIRAGAGGEEAALFAADLYRMYVRYAERKGWKVELITANETGIGGYKE 162

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
               + G G +  LK+ESG+HRVQRVP+TE SGR+HTS  +VA+LP+ DEVDV +R EDL
Sbjct: 163 IVFRVEGHGAFSALKYESGVHRVQRVPVTEASGRIHTSTATVAVLPEPDEVDVEIRPEDL 222

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDT+R+ G+GGQ+ N T+SAVR+THIPTG+ +S QDERSQ  N+ KA+++L AKLY+++
Sbjct: 223 RIDTFRASGAGGQYVNMTDSAVRITHIPTGIVVSCQDERSQLKNRVKAMQLLRAKLYDLK 282

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
             +     +  R  QIGSGDRSERIRTYNFPQ RVTDHR+G+T H + ++++G +LD  +
Sbjct: 283 LQQQQEEMASERRGQIGSGDRSERIRTYNFPQNRVTDHRIGLTLHNLEEILDG-DLDELV 341

Query: 298 DALLLQQEMDAIASFGS 314
            AL    +M+ +   G+
Sbjct: 342 YALATADQMEKLKLMGA 358


>gi|419802521|ref|ZP_14327707.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK262]
 gi|419844745|ref|ZP_14368032.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK2019]
 gi|385190081|gb|EIF37531.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK262]
 gi|386416671|gb|EIJ31163.1| peptide chain release factor 1 [Haemophilus parainfluenzae HK2019]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/298 (50%), Positives = 211/298 (70%), Gaps = 7/298 (2%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGE 78
           L+ +  E K+M +M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+
Sbjct: 67  LMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGD 122

Query: 79  EASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIH 138
           EA +FA D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG H
Sbjct: 123 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGH 182

Query: 139 RVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNS 197
           RVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+S
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 242

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+THIPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++  R   +GSGD
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGSGD 302

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           RS++IRTYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+   +
Sbjct: 303 RSDKIRTYNYPQGRVTDHRINLTLYRLDEVMNGK-IDELIQPIITEYQADQLAALSES 359


>gi|320160374|ref|YP_004173598.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
 gi|319994227|dbj|BAJ62998.1| peptide chain release factor 1 [Anaerolinea thermophila UNI-1]
          Length = 357

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/306 (46%), Positives = 217/306 (70%), Gaps = 3/306 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           E RT  K+I+  ++L+   S D+++ ++A  +L      ++ L+  L   L+PKD  DER
Sbjct: 48  EYRTVLKQIEEARTLLE--SGDEELRELAEADLETLEPRQEVLEKELKTLLIPKDPRDER 105

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + I+E+RAGTGGEEA+LFA D+F+MY RY++K+GW  E++   E+ + GYKE    + G 
Sbjct: 106 NVIVEIRAGTGGEEAALFAGDLFRMYSRYAEKRGWSVEIISQNETGIGGYKEIIFMVKGK 165

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
           G Y +LK+ESG+HRVQR+P+TE SGR+HTS  +VA+L + DEVD+ + + DL I+ YRS 
Sbjct: 166 GAYSRLKYESGVHRVQRIPVTESSGRIHTSTATVAVLAEVDEVDINIPDSDLEIEVYRSA 225

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQ+    ++AVR+TH+PTG+ ++ QDERSQ  NK +A+ +L AKLYE+E  +     
Sbjct: 226 GAGGQNVQKNSTAVRITHLPTGIVVACQDERSQLQNKLRAMSILRAKLYEIEEQKRQQEL 285

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
              R  Q+G+G+R+E+IRTYNFPQ RVTDHR+GI+ + +  +++GE +D+FID L L+ E
Sbjct: 286 DATRRSQVGTGERAEKIRTYNFPQSRVTDHRIGISSYNLPAVLDGE-IDLFIDELALRSE 344

Query: 306 MDAIAS 311
            + +A+
Sbjct: 345 TERLAT 350


>gi|37679115|ref|NP_933724.1| peptide chain release factor 1 [Vibrio vulnificus YJ016]
 gi|320157139|ref|YP_004189518.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
 gi|37197857|dbj|BAC93695.1| protein chain release factor A [Vibrio vulnificus YJ016]
 gi|319932451|gb|ADV87315.1| peptide chain release factor 1 [Vibrio vulnificus MO6-24/O]
          Length = 363

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A    + L + L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 73  DDAEMREMAQEEIKAAKVAIEDLAAELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 132

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY ++++K+GW+ EV+   E++  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 133 DLFRMYSKFAEKRGWRIEVMSANEAEHGGYKEMIAKVNGDGAYGFLKFESGGHRVQRVPA 192

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VAI+P+  E ++  ++  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 193 TESQGRVHTSACTVAIMPEIPEAEIPEIKASDLKIDTFRSSGAGGQHVNTTDSAIRITHL 252

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E ++     S  R   +GSGDRS+RIRT
Sbjct: 253 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 312

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + +S++MEG +L   ID ++ + + D +A+  
Sbjct: 313 YNYPQGRVSDHRINLTIYRLSEVMEG-DLQSLIDPVIQEHQADQLAALA 360


>gi|337285924|ref|YP_004625397.1| peptide chain release factor 1 [Thermodesulfatator indicus DSM
           15286]
 gi|335358752|gb|AEH44433.1| peptide chain release factor 1 [Thermodesulfatator indicus DSM
           15286]
          Length = 366

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/278 (52%), Positives = 203/278 (73%), Gaps = 22/278 (7%)

Query: 18  KSLIYECSEDKDMLDMATEELCLAIDEE------------KRLQSLLLKSLLPKDDADER 65
           K ++ + +++K++L+ A EE+     EE            KRL  LL+    PKD  DE+
Sbjct: 58  KKVLKDIADNKELLEDADEEIAKLAREELKELEAEREALEKRLMLLLV----PKDPNDEK 113

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + +LE+RAGTGGEEA+LFA D+F+MY RY+++KGW+ E++ V  + L G+KE  A I G 
Sbjct: 114 NIMLEIRAGTGGEEAALFAADLFRMYSRYAERKGWEVEILDVNPTGLGGFKEIIAMIKGK 173

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
           G Y +LK+ESG+HRVQR+P TE  GR+HTSAV+VA+LP+A+EVDV +R EDL+IDT R+ 
Sbjct: 174 GAYSRLKYESGVHRVQRIPETESGGRIHTSAVTVAVLPEAEEVDVEIRPEDLKIDTMRAS 233

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G+GGQH N T SAVR+THIPTG+ +   +ERSQH N+AKA+++L  +LYE+   ++    
Sbjct: 234 GAGGQHVNKTESAVRITHIPTGIVVYCANERSQHQNRAKAMQILRTRLYEI---KLREQE 290

Query: 246 SKLRSE---QIGSGDRSERIRTYNFPQGRVTDHRVGIT 280
            K+R+E   Q+GSGDRSERIRTYNFPQ R+TDHR+G+T
Sbjct: 291 EKIRAERRSQVGSGDRSERIRTYNFPQNRITDHRIGLT 328


>gi|90412790|ref|ZP_01220790.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
 gi|90326149|gb|EAS42576.1| peptide chain release factor 1 [Photobacterium profundum 3TCK]
          Length = 362

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  +     RL+  L   L+PKD  D+R+C +E+RAG GG+EA +FA 
Sbjct: 72  DDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++++GW+ EV+    S+  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGILKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++P+  E ++  +   DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMPEIPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + H   +  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARIIKAEEEKRHAEEASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +LD  I  ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRITLTLYRLNEVMEG-DLDSLIQPVIQEHQADELAAMA 359


>gi|402567760|ref|YP_006617105.1| peptide chain release factor 1 [Burkholderia cepacia GG4]
 gi|402248957|gb|AFQ49411.1| peptide chain release factor 1 [Burkholderia cepacia GG4]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/288 (51%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D  M D A +E+  A +   RL+  L K LLPKD  D+R+  LE+RAGTGG+E++LFA D
Sbjct: 71  DASMRDFAEDEIRSARERMVRLEGELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQRVP T
Sbjct: 131 LLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRVTHIP
Sbjct: 191 ETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSERIRTY
Sbjct: 251 TGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 311 NFPQGRMTDHRINLTLYRLEALMDG-DLDELIGALVTEHQAELLASLG 357


>gi|343505037|ref|ZP_08742687.1| peptide chain release factor 1 [Vibrio ichthyoenteri ATCC 700023]
 gi|342809079|gb|EGU44205.1| peptide chain release factor 1 [Vibrio ichthyoenteri ATCC 700023]
          Length = 362

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKDAKESIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F+MY ++++KKGW+ EV+   ES+  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 NLFRMYSKFAEKKGWRVEVMSSNESEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA++VL A++ + E++R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMQVLAARIVQAEQARRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLASLIDPVIQEYQADQLAALA 359


>gi|385227845|ref|YP_005787778.1| peptide chain release factor 1 [Helicobacter pylori Puno120]
 gi|344334283|gb|AEN14727.1| peptide chain release factor 1 [Helicobacter pylori Puno120]
          Length = 352

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILETKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   +LD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGDLDEVINPLI 344


>gi|325578168|ref|ZP_08148303.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159904|gb|EGC72033.1| peptide chain release factor RF1 [Haemophilus parainfluenzae ATCC
           33392]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/295 (50%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 20  LIYECSEDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGE 78
           L+ +  E K+M +M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+
Sbjct: 67  LMLDDPEMKEMAEMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGD 122

Query: 79  EASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIH 138
           EA +FA D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG H
Sbjct: 123 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGH 182

Query: 139 RVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNS 197
           RVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+S
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 242

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+THIPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++  R   +GSGD
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGSGD 302

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           RS++IRTYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 303 RSDKIRTYNYPQGRVTDHRINLTLYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|152980137|ref|YP_001351903.1| peptide chain release factor 1 [Janthinobacterium sp. Marseille]
 gi|166223564|sp|A6SUF6.1|RF1_JANMA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151280214|gb|ABR88624.1| RF-1 peptide chain release factor [Janthinobacterium sp. Marseille]
          Length = 360

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM + A EE+  A    ++L+  L K LLPKD  D+R+  LE+RAGTGG+EA+LFA D
Sbjct: 71  DPDMKEFAQEEIAAAKTRMEQLEIDLQKMLLPKDPNDDRNIFLEIRAGTGGDEAALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY R++++  W+ E+V  + S++ GYKE    I G G Y KLKFESG HRVQRVP T
Sbjct: 131 LLRMYSRFAERNRWQIEMVSESASEVGGYKEVIVRIIGFGAYSKLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VAI+P+ADEV DV +   DLRIDTYR+ G+GGQH N T+SAVR+THIP
Sbjct: 191 ETQGRIHTSACTVAIMPEADEVEDVNINPADLRIDTYRASGAGGQHINKTDSAVRITHIP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NKA ALKVL A++ +++        +  R   IGSGDRSERIRTY
Sbjct: 251 TGIVVECQDDRSQHKNKASALKVLAARIKDVQLREQQSKEAATRKSLIGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  +M+G+ L    +AL  + + + +A+ G
Sbjct: 311 NFPQGRMTDHRINLTLYKLDFIMDGD-LTELTNALAAEHQAELLAALG 357


>gi|332529974|ref|ZP_08405924.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
 gi|332040447|gb|EGI76823.1| peptide chain release factor 1 [Hylemonella gracilis ATCC 19624]
          Length = 369

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 159/316 (50%), Positives = 216/316 (68%), Gaps = 12/316 (3%)

Query: 10  KQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCIL 69
           +Q+E D   S   E   + DM D+A EE+  A+ +  RL+  L + LLPKD  D R+  L
Sbjct: 56  RQRETD--LSSAREMLAEPDMTDIAQEEITAAMADLVRLEDELQRLLLPKDPDDARNAFL 113

Query: 70  EVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI------- 122
           E+RAGTGG+E++LFA D+ +MY RY+ ++GWK E++  + S+L GYKE    I       
Sbjct: 114 EIRAGTGGDESALFAADLLRMYTRYADQRGWKTEIMSESPSELGGYKEVVLRIDGGNAES 173

Query: 123 -SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRID 180
            SG+GVYG+L+FESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + V++   +LRID
Sbjct: 174 PSGLGVYGELRFESGGHRVQRVPATETQGRIHTSACTVAVLPEPDEQEAVQINPAELRID 233

Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
           T+R+ G+GGQH N T+SAVR+TH+PTG+    QD+RSQH NKAKAL+VL A++ E ERS 
Sbjct: 234 TFRASGAGGQHINKTDSAVRITHLPTGIVAECQDDRSQHRNKAKALQVLAARIQEKERSE 293

Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
                +  R   IGSGDRS+RIRTYNFPQGR+TDHR+ +T + +S +MEG  LD  + AL
Sbjct: 294 RAAKDAATRRGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLSQVMEG-ALDDVVQAL 352

Query: 301 LLQQEMDAIASFGSTQ 316
              +E + +A     Q
Sbjct: 353 RHAREAELLAELEVAQ 368


>gi|422665159|ref|ZP_16725031.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|424066162|ref|ZP_17803634.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
           str. ISPaVe013]
 gi|424070808|ref|ZP_17808240.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
           str. ISPaVe037]
 gi|440720020|ref|ZP_20900441.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34876]
 gi|440726145|ref|ZP_20906402.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34881]
 gi|330975577|gb|EGH75643.1| peptide chain release factor 1 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
 gi|407999891|gb|EKG40261.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
           str. ISPaVe037]
 gi|408002594|gb|EKG42837.1| peptide chain release factor 1 [Pseudomonas syringae pv. avellanae
           str. ISPaVe013]
 gi|440366742|gb|ELQ03819.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34876]
 gi|440367292|gb|ELQ04358.1| peptide chain release factor 1 [Pseudomonas syringae BRIP34881]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 218/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L ++L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYAQLLRVQGDLEGAQALLKDS--DPDMREMAVEEVRETRQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|404476870|ref|YP_006708301.1| peptide chain release factor 1 [Brachyspira pilosicoli B2904]
 gi|431807944|ref|YP_007234842.1| peptide chain release factor 1 [Brachyspira pilosicoli P43/6/78]
 gi|434381302|ref|YP_006703085.1| peptide chain release factor 1 [Brachyspira pilosicoli WesB]
 gi|404429951|emb|CCG55997.1| peptide chain release factor 1 [Brachyspira pilosicoli WesB]
 gi|404438359|gb|AFR71553.1| peptide chain release factor 1 [Brachyspira pilosicoli B2904]
 gi|430781303|gb|AGA66587.1| peptide chain release factor 1 [Brachyspira pilosicoli P43/6/78]
          Length = 358

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/307 (47%), Positives = 217/307 (70%), Gaps = 1/307 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           +L+T  KEI+    ++     DK++ +MA  E+     +++ + + L   LLPKD  D +
Sbjct: 51  KLKTVLKEIEDANEMLNHSDTDKELKNMALLEIEELNQKKENIINDLRLLLLPKDKNDGK 110

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + I+E+R GTGG+E++LF  D+F+MY R+ ++  +K E++ ++ ++L GYKE   ++SG 
Sbjct: 111 NIIVEIRVGTGGDESALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSVSGK 170

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
             Y  LKFESG HRVQR+P TE  GR+HTSA +VAI+P+A+E DV +++ED+R+D +RS 
Sbjct: 171 NAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAIMPEAEESDVIIKDEDIRVDIFRSS 230

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL A++YE E +      
Sbjct: 231 GPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKE 290

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +K R ++IGSGDRSERIRTYNFPQ RVTDHR+ +T + +   M+GE  +I  DAL  +++
Sbjct: 291 AKERRDKIGSGDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEI-TDALFKKEQ 349

Query: 306 MDAIASF 312
            + +AS+
Sbjct: 350 EELLASY 356


>gi|384896816|ref|YP_005772244.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75]
 gi|317011921|gb|ADU82529.1| peptide chain release factor 1 [Helicobacter pylori Lithuania75]
          Length = 352

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSELETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   +LD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLI 344


>gi|89900074|ref|YP_522545.1| peptide chain release factor 1 [Rhodoferax ferrireducens T118]
 gi|119361589|sp|Q21YY9.1|RF1_RHOFD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|89344811|gb|ABD69014.1| bacterial peptide chain release factor 1 (bRF-1) [Rhodoferax
           ferrireducens T118]
          Length = 366

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 155/296 (52%), Positives = 209/296 (70%), Gaps = 4/296 (1%)

Query: 8   RTKQKEID--GLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           R +Q E D  G + L+    +D DM  MA EE+  A  E ++L++ L + LLPKD  D R
Sbjct: 54  RYQQLEADLSGAQELLRGSVDDPDMTAMAQEEIDNASAELQKLENELQRMLLPKDPDDAR 113

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           +  +E+RAGTGG+E++LFA D+ +MY RY +++GWK E++  + S+L GYKE    I G 
Sbjct: 114 NAFVEIRAGTGGDESALFAADLLRMYTRYCERRGWKAEIISESPSELGGYKEVVIKIEGD 173

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADE-VDVRLRNEDLRIDTYRS 184
            VYG LKFESG HRVQRVP+TE  GR+HTSA +VA+L + DE V +++   DLRIDTYR+
Sbjct: 174 HVYGALKFESGGHRVQRVPVTETQGRIHTSACTVAVLAEPDEAVAIQINPADLRIDTYRA 233

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQH N T+SAVR+TH+PTG+    QD RSQH NKA+ALKVL A+++E +RS     
Sbjct: 234 SGAGGQHINKTDSAVRITHLPTGIVAECQDGRSQHSNKAQALKVLTARIHEKDRSERAAK 293

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            +  R   IGSGDRS+RIRTYNFPQGR+TDHR+ +T + +  +MEG +LD  + AL
Sbjct: 294 DAAERKGLIGSGDRSDRIRTYNFPQGRLTDHRINLTLYKLLTIMEG-DLDDVVQAL 348


>gi|260914191|ref|ZP_05920664.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
 gi|260631824|gb|EEX50002.1| peptide chain release factor RF1 [Pasteurella dagmatis ATCC 43325]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 205/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D  M +MA EE+     E ++++  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDLSMKEMAQEEIEECKAELEQVEQQLQILLLPKDPNDEYNCYLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ K W+ EV+   ES+  GYKE    +SG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEGKRWRIEVLSANESEQGGYKEIIVKVSGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESELPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ + E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLASRIVQAEKERQEQQQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|420419179|ref|ZP_14918269.1| peptide chain release factor 1 [Helicobacter pylori NQ4076]
 gi|393031085|gb|EJB32157.1| peptide chain release factor 1 [Helicobacter pylori NQ4076]
          Length = 352

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDSNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE    I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIVLIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V L   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVTLNPGDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|134301001|ref|YP_001114497.1| peptide chain release factor 1 [Desulfotomaculum reducens MI-1]
 gi|134053701|gb|ABO51672.1| bacterial peptide chain release factor 1 (bRF-1) [Desulfotomaculum
           reducens MI-1]
          Length = 356

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/274 (51%), Positives = 200/274 (72%), Gaps = 4/274 (1%)

Query: 28  KDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 87
           ++M+++  EEL   I+E++    +LL   LPKD  D+++ I+E+R GTGG+EA+LFA D+
Sbjct: 74  REMVELEIEELTSKIEEQENKLKILL---LPKDPNDDKNVIMEIRGGTGGDEAALFAGDL 130

Query: 88  FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 147
           F+MY RY++KKGW+ E++   E+DL G+KE +  I G G +  LKFESG+HRVQRVP TE
Sbjct: 131 FRMYSRYAEKKGWRTEIIDANETDLGGFKEVTFVIEGKGAFSTLKFESGVHRVQRVPATE 190

Query: 148 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 207
             GR+HTSA +VA+LP+A+EVD+ +   D+RID + + G GGQ  NTT SAVR+THIPTG
Sbjct: 191 SGGRIHTSAATVAVLPEAEEVDIDINANDIRIDLFCASGPGGQCVNTTQSAVRITHIPTG 250

Query: 208 MTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNF 267
             +S QDE+SQH NK KA++VL A+L +  +     + +  R   +GSGDRSERIRTYNF
Sbjct: 251 TVVSCQDEKSQHKNKDKAMRVLRARLLDKAQDEQQKAIAGARKSMVGSGDRSERIRTYNF 310

Query: 268 PQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           PQ R+TDHR+G+T H +  +++G +LD  IDAL+
Sbjct: 311 PQNRITDHRIGLTLHRLEYVLQG-DLDELIDALI 343


>gi|307244800|ref|ZP_07526899.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307253754|ref|ZP_07535608.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258211|ref|ZP_07539954.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306854245|gb|EFM86451.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306863238|gb|EFM95178.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867671|gb|EFM99516.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|296134391|ref|YP_003641638.1| peptide chain release factor 1 [Thermincola potens JR]
 gi|296032969|gb|ADG83737.1| peptide chain release factor 1 [Thermincola potens JR]
          Length = 355

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/246 (58%), Positives = 184/246 (74%), Gaps = 1/246 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD  DE++ I+E+R G GGEEA+LFA D+F+MY RY++ KGWK E++    +D+ G+
Sbjct: 99  LLPKDPNDEKNVIMEIRGGAGGEEAALFAGDLFRMYSRYAEAKGWKTEILSSNPTDIGGF 158

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE    I G G Y +LKFESG+HRVQRVP TE SGR+HTS V+VA+LP+A+EVDV +   
Sbjct: 159 KEIIFLIEGQGAYSRLKFESGVHRVQRVPTTESSGRIHTSTVTVAVLPEAEEVDVDIDPN 218

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           DLRID + S G GGQ  NTT SAVRVTHIPTG+ +S QDE+SQH NK KAL+VL A+L +
Sbjct: 219 DLRIDVFCSSGPGGQSVNTTQSAVRVTHIPTGIVVSCQDEKSQHKNKEKALRVLRARLLD 278

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
             +       +  R  Q+G+GDRSERIRTYNFPQGRVTDHR+G+T H +  ++EG +LD 
Sbjct: 279 KAQEEQRNQLASTRKSQVGTGDRSERIRTYNFPQGRVTDHRIGLTLHKLDMVLEG-DLDE 337

Query: 296 FIDALL 301
            I+AL+
Sbjct: 338 IIEALI 343


>gi|54309994|ref|YP_131014.1| peptide chain release factor 1 [Photobacterium profundum SS9]
 gi|61214628|sp|Q6LNB4.1|RF1_PHOPR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|46914433|emb|CAG21212.1| putative peptide chain release factor A [Photobacterium profundum
           SS9]
          Length = 362

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/289 (49%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  +     RL+  L   L+PKD  D+R+C +E+RAG GG+EA +FA 
Sbjct: 72  DDPEMREMAQEEVKESKANILRLEDELQVLLIPKDPNDDRNCFVEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++++GW+ EV+    S+  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAERRGWRIEVINENRSEQGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++P+  E ++  +   DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMPEVPEAEIPEINTGDLKIDTFRSSGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++ + E  + H   +  R   +GSGDRS+RIRT
Sbjct: 252 PTGIVVECQDERSQHKNKAKAMSVLAARITKAEEEKRHAEEASTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++D  I  ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRITLTLYRLNEVMEG-DMDSLIQPVIQEHQADELAAMA 359


>gi|254362308|ref|ZP_04978420.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
 gi|452745893|ref|ZP_21945725.1| peptide chain release factor 1 [Mannheimia haemolytica serotype 6
           str. H23]
 gi|153093888|gb|EDN74816.1| peptide chain release factor RF1 [Mannheimia haemolytica PHL213]
 gi|452086032|gb|EME02423.1| peptide chain release factor 1 [Mannheimia haemolytica serotype 6
           str. H23]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|423195701|ref|ZP_17182284.1| peptide chain release factor 1 [Aeromonas hydrophila SSU]
 gi|404633113|gb|EKB29678.1| peptide chain release factor 1 [Aeromonas hydrophila SSU]
          Length = 362

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 143/316 (45%), Positives = 215/316 (68%), Gaps = 4/316 (1%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +H   + R  ++ ++  + ++ E  +D D+ +MA EEL LA    +  +  L   LLP+D
Sbjct: 49  VHAFQQFRQAEENLEATRQMLEE--DDADLREMAQEELPLAKATFEEQEQALQVMLLPRD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+ +C LE+RAG GG+EA++FA D+F+MY RY++++GW+  +V   + +  GYKE  A
Sbjct: 107 PKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIA 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRI 179
            + G  VYG+LKFESG HRVQRVP TE  GRVHTSA +VA+LP+  E + + +   DL+I
Sbjct: 167 KVEGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSDLKI 226

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT+R+ G+GGQH N T+SA+R+TH+PTG+ +  QDERSQH N+AKA+ VL A+L   E  
Sbjct: 227 DTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDE 286

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R   +    R   +GSGDRSERIRTYN+PQGR+++HR+ +T + + ++MEG +LD  I+ 
Sbjct: 287 RHRAAEQSTRRNLVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLGEIMEG-DLDCVINP 345

Query: 300 LLLQQEMDAIASFGST 315
           ++ + + D +AS   +
Sbjct: 346 MIQEYQADQLASLAES 361


>gi|320538185|ref|ZP_08038080.1| peptide chain release factor 1 [Treponema phagedenis F0421]
 gi|320145002|gb|EFW36723.1| peptide chain release factor 1 [Treponema phagedenis F0421]
          Length = 371

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/292 (50%), Positives = 216/292 (73%), Gaps = 2/292 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           +K++    +L+ E S D ++ +MA EE+     + ++ ++ L   L+P D  +E++ I+E
Sbjct: 70  EKQLQEAHALMQEES-DHELKEMAREEMHALEKQLEQSEADLKMLLIPPDPMEEKNIIME 128

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA+LFA D+FKMY  Y++ K W +E++   E++L G+KE   +ISG  VYG 
Sbjct: 129 IRGGTGGDEAALFAADLFKMYTHYAESKNWTYEIMDANETELGGFKEIVFSISGKYVYGS 188

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           L++ESG+HRVQRVP TE SGR+HTSAV+VA+LP+A+E ++ ++ EDLR+D  R+GG GGQ
Sbjct: 189 LRYESGVHRVQRVPETEGSGRIHTSAVTVAVLPEAEETEIVIKPEDLRVDVMRAGGPGGQ 248

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT+SAVR+THIPTGM +  QDE+SQ  NKAKAL+VL ++LY++E S+ +  R++ R 
Sbjct: 249 SVNTTDSAVRLTHIPTGMVVICQDEKSQIKNKAKALRVLRSRLYDLEESKKNQERAQNRK 308

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            Q+GSGDRSERIRTYNFPQ RVTDHR+ +T + +  +++G +LD  I+ L +
Sbjct: 309 SQVGSGDRSERIRTYNFPQNRVTDHRINLTLYQLDAVLQG-DLDEIIEPLCI 359


>gi|406596337|ref|YP_006747467.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
 gi|407683285|ref|YP_006798459.1| peptide chain release factor 1 [Alteromonas macleodii str. 'English
           Channel 673']
 gi|407687226|ref|YP_006802399.1| peptide chain release factor 1 [Alteromonas macleodii str.
           'Balearic Sea AD45']
 gi|406373658|gb|AFS36913.1| peptide chain release factor 1 [Alteromonas macleodii ATCC 27126]
 gi|407244896|gb|AFT74082.1| peptide chain release factor 1 [Alteromonas macleodii str. 'English
           Channel 673']
 gi|407290606|gb|AFT94918.1| peptide chain release factor 1 [Alteromonas macleodii str.
           'Balearic Sea AD45']
          Length = 361

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A  E +RL++ L   LLPKD  D+ +C LE+RAG GG+EA++FA 
Sbjct: 72  DDAEMREMAQEEMKDAKAEIERLETELQVLLLPKDPNDDNNCFLEIRAGAGGDEAAIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ +GW+ E+V   E +  GYKE  A +SG GVYG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSRYAESRGWRVELVNANEGEHGGYKEVIANVSGDGVYGVLKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA+LP+  E   + +   +LRIDT+R+ G+GGQH N T+SA+R+TH+
Sbjct: 192 TESQGRIHTSACTVAVLPEIPESQAIEINPAELRIDTFRASGAGGQHVNKTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH N+AKA+ VL A+L ++E  +     +  R   +GSGDRSERIRT
Sbjct: 252 PTGLVVECQDERSQHKNRAKAMSVLQARLNQIEEEKRAAEEASTRKSLVGSGDRSERIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + +++EG +L   ID +L + + D +AS 
Sbjct: 312 YNFPQGRVTDHRINLTIYRLDEVVEG-DLKQLIDPILQEHQADLLASL 358


>gi|254465069|ref|ZP_05078480.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
 gi|206685977|gb|EDZ46459.1| peptide chain release factor 1 [Rhodobacterales bacterium Y4I]
          Length = 351

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 154/318 (48%), Positives = 218/318 (68%), Gaps = 14/318 (4%)

Query: 5   SELRTKQKEIDGLKSLIYECSE------DKDMLDMATEE---LCLAIDEEKRLQSLLLKS 55
           S+LR   +++   + L  +  E      D DM ++A EE   L  AI E +    L   +
Sbjct: 38  SDLRPVAEQVAAYRKLQSDLREAELMLADPDMKELAAEEIPALKAAIPEAEHALQL---A 94

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           LLPKD AD R  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GWKF+++    ++L G 
Sbjct: 95  LLPKDAADSRPAMLEIRPGTGGDEAALFAGDLLRMYQRYAEGQGWKFDIIEEQMTELGGI 154

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A I G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +   
Sbjct: 155 KEVVAHIKGDNVFARLKYESGVHRVQRVPATESGGRIHTSAATVAVLPEAEDVDIHIDAN 214

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D+RIDT R+ G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL  +LY+
Sbjct: 215 DIRIDTMRASGAGGQHVNTTDSAVRITHLPTGIIVT-SSEKSQHRNREIAMQVLKTRLYD 273

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           +ER RI   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M G +LD 
Sbjct: 274 LERQRIDSERSADRASQVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDQVM-GGDLDE 332

Query: 296 FIDALLLQQEMDAIASFG 313
            IDAL    +   +A  G
Sbjct: 333 IIDALTADNQARLLAEMG 350


>gi|170761198|ref|YP_001785468.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|238688740|sp|B1KSR1.1|RF1_CLOBM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|169408187|gb|ACA56598.1| peptide chain release factor 1 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 358

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 223/311 (71%), Gaps = 8/311 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEE---LCLAIDEEKRLQSLLLKSLLPKDDA 62
           E +  Q++++  K ++ E S DK++ +MA EE   L L +++ +R  ++LL   LPKD  
Sbjct: 50  EYKKAQEDLESDKEMLKEES-DKELREMAQEEIKELTLKLEDLERELTILL---LPKDPN 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D++D  +E+RAG GGEEA+LFA ++ +MY RY+++K WK E + +  +D+ G+KE + A+
Sbjct: 106 DDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAV 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+ D+VD+ +   DLRID Y
Sbjct: 166 KGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVY 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G GGQ  NTT+SAVR+TH+PTG+ ++ QDE+SQ  NK KA+KVL A+L+E   +   
Sbjct: 226 RASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERA 285

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            S ++ R  Q+G+GDRSERIRTYN+PQGR+TDHR+G+T + +   ++G ++D  I+AL+ 
Sbjct: 286 ASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDG-DIDEAIEALVT 344

Query: 303 QQEMDAIASFG 313
           + + + + + G
Sbjct: 345 EDQAEKMKNLG 355


>gi|444356343|ref|ZP_21158022.1| peptide chain release factor 1 [Burkholderia cenocepacia BC7]
 gi|444373722|ref|ZP_21173065.1| peptide chain release factor 1 [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443591291|gb|ELT60200.1| peptide chain release factor 1 [Burkholderia cenocepacia
           K56-2Valvano]
 gi|443607390|gb|ELT75097.1| peptide chain release factor 1 [Burkholderia cenocepacia BC7]
          Length = 380

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/288 (51%), Positives = 207/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D  M D A +E+  A +   RL++ L K LLPKD  D+R+  LE+RAGTGG+E++LFA D
Sbjct: 91  DPSMRDFAEDEIRSAREGMARLETELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFAGD 150

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQRVP T
Sbjct: 151 LLRMYLRFAERQRWQVEMMSESASDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQRVPAT 210

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRVTHIP
Sbjct: 211 ETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHIP 270

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSERIRTY
Sbjct: 271 TGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSERIRTY 330

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 331 NFPQGRMTDHRINLTLYRLEAIMDG-DLDELIGALVTEHQAELLASLG 377


>gi|407693843|ref|YP_006818632.1| peptide chain release factor 1 [Actinobacillus suis H91-0380]
 gi|407389900|gb|AFU20393.1| peptide chain release factor 1 [Actinobacillus suis H91-0380]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|254000219|ref|YP_003052282.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
 gi|253986898|gb|ACT51755.1| peptide chain release factor 1 [Methylovorus glucosetrophus SIP3-4]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/291 (52%), Positives = 208/291 (71%), Gaps = 8/291 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M   A EE+       + +   L K LLPKD  DER+  LE+RAGTGG+E++LFA D
Sbjct: 71  DPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++++ WK EVV  +ES++ GYKE  A I G G Y KLKFESG HRVQRVP T
Sbjct: 131 LFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVPET 190

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA+LP+ DEV DV +   D+RIDT+R+ G+GGQH N T+SAVR+TH P
Sbjct: 191 ETQGRIHTSACTVAVLPEVDEVSDVTISPADIRIDTFRASGAGGQHINKTDSAVRITHFP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ---IGSGDRSERI 262
           TG+ +  QD RSQH NKA+A++VL A++   +  +++  +SK+ SE+   IGSGDRSERI
Sbjct: 251 TGIVVECQDGRSQHSNKAQAMQVLAARI---KAKQVNEQQSKIASERRSLIGSGDRSERI 307

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQGR+TDHR+ +T + I  + EG ++D  I+AL  + + D +A+ G
Sbjct: 308 RTYNYPQGRITDHRINLTLYKIDAITEG-DMDELINALANEHQADLLATLG 357


>gi|392550477|ref|ZP_10297614.1| peptide chain release factor 1 [Pseudoalteromonas spongiae
           UST010723-006]
          Length = 361

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM +MA EE   A    + L+  L   +LPKD  D  +  LEVRAGTGG+EA++FA D
Sbjct: 73  DPDMREMAQEEFKEAKANIEALEDELQVLMLPKDPRDNNNVFLEVRAGTGGDEAAIFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + WK +VV   E +  G+KE  A ISG GVYGKLKFESG HRVQRVP T
Sbjct: 133 LFRMYSRYAETQKWKVDVVSTNEGEHGGFKEVIANISGEGVYGKLKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GRVHTSA +VA++ +  E + + + + DL+IDT+R+ G+GGQH N T+SA+R+THIP
Sbjct: 193 ESQGRVHTSACTVAVMAEVPEAEAIEINSSDLKIDTFRASGAGGQHVNKTDSAIRITHIP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH NKAKAL VL ++L + E  +     +  R   +GSGDRSERIRTY
Sbjct: 253 TGVVVECQDERSQHKNKAKALSVLASRLQQAEDEKRMAEEASERRNLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQGRVTDHR+ +T + +++++EG +L   +D L+L+ + D +A+ G
Sbjct: 313 NYPQGRVTDHRINLTLYKLNEVVEG-DLGAIVDPLVLEHQADLLAAMG 359


>gi|345430012|ref|YP_004823132.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
 gi|301156075|emb|CBW15546.1| peptide chain release factor RF-1 [Haemophilus parainfluenzae T3T1]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/295 (50%), Positives = 210/295 (71%), Gaps = 7/295 (2%)

Query: 20  LIYECSEDKDMLDMATEELCLAI-DEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGE 78
           L+ +  E K+M +M  EE  + I D E++LQ LLL    PKD  DE +C LE+RAGTGG+
Sbjct: 67  LMLDDPEMKEMAEMEIEESKVEIEDVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGD 122

Query: 79  EASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIH 138
           EA +FA D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG H
Sbjct: 123 EAGIFAGDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGDGVYGQLKFESGGH 182

Query: 139 RVQRVPLTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNS 197
           RVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+S
Sbjct: 183 RVQRVPKTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDS 242

Query: 198 AVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGD 257
           AVR+THIPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++  R   +GSGD
Sbjct: 243 AVRITHIPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQADTRRNLLGSGD 302

Query: 258 RSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           RS++IRTYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 303 RSDKIRTYNYPQGRVTDHRINLTLYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|256830555|ref|YP_003159283.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
 gi|256579731|gb|ACU90867.1| peptide chain release factor 1 [Desulfomicrobium baculatum DSM
           4028]
          Length = 353

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/313 (48%), Positives = 214/313 (68%), Gaps = 9/313 (2%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRL-------QSLLLKSLL 57
           +EL    K  +  K+L+ E +E++++   +  ELC     E  L       Q  +LK LL
Sbjct: 39  AELDEIVKAFELYKTLLREMAENQELAKDSDPELCEMAQAEIVLLKAAIGEQEKVLKQLL 98

Query: 58  -PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
            PKD  DE++ ILE+RAGTGGEEA+LF  D+F+MY RY++   W+ EV+  +++   G+K
Sbjct: 99  TPKDPLDEKNIILEIRAGTGGEEAALFVADIFRMYSRYAELHSWRVEVLSSSDTGTGGFK 158

Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
           E  A++SG  VY KLK+ESG HRVQRVP TE  GR+HTSA++VAILP+A+EVDV++   D
Sbjct: 159 EIIASVSGTNVYSKLKYESGAHRVQRVPATESQGRIHTSAITVAILPEAEEVDVKIDPND 218

Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
           +R+D +RS G GGQ  NTT+SA+R+TH+ TG+ +  QDE+SQH NKAKALKVL ++L + 
Sbjct: 219 IRVDVFRSSGPGGQSVNTTDSAIRITHLATGLVVICQDEKSQHKNKAKALKVLRSRLLQA 278

Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
            +     +    R  Q+GSGDRSERIRTYN+PQGRVTDHR+ +T + +   MEG ++D  
Sbjct: 279 AQDETKKAYDDNRKSQVGSGDRSERIRTYNYPQGRVTDHRINLTLYNLDQAMEG-HIDDI 337

Query: 297 IDALLLQQEMDAI 309
           ID L+   + +A+
Sbjct: 338 IDGLVQHYQAEAM 350


>gi|255993956|ref|ZP_05427091.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
 gi|255993624|gb|EEU03713.1| peptide chain release factor 1 [Eubacterium saphenum ATCC 49989]
          Length = 357

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/309 (48%), Positives = 209/309 (67%), Gaps = 1/309 (0%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           S  +  ++E+   K L+     D++M D+A  E+    DE  + +  L   L+PKD  DE
Sbjct: 49  SSFKKHKQELSDAKELLAGAGGDEEMKDLAKLEISGLEDEINKEEEQLKILLIPKDPRDE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           ++ ILE+RAGTGGEEA+LF  D+ +MY  Y+  K WK E++ + E+ L G KEA   I G
Sbjct: 109 KNVILEIRAGTGGEEAALFGSDLLRMYSMYADSKNWKTEIIELNETGLNGIKEAVMLIKG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
            G + +LK+ESG+HRVQRVP TE SGRVHTSA +VA+LP+ D+V+V L   D+R+D YRS
Sbjct: 169 KGAFSRLKYESGVHRVQRVPTTESSGRVHTSAATVAVLPEMDDVEVDLNPNDVRVDVYRS 228

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQ  NTT+SAVR+TH PTG+ ++ QDE+SQ  NK KA KVL ++LY ++    +  
Sbjct: 229 SGNGGQSVNTTDSAVRLTHEPTGIVVTCQDEKSQIKNKDKAFKVLKSRLYNLKMEEQNKQ 288

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQ 304
            S  R  Q+GSGDRSERIRTYNFPQGRV+DHR+G+T + + + M G ++D  I+ L+   
Sbjct: 289 LSDERKSQVGSGDRSERIRTYNFPQGRVSDHRIGLTIYKLDNFMNG-DIDEVIEGLITAD 347

Query: 305 EMDAIASFG 313
           +   ++ FG
Sbjct: 348 QAAKMSKFG 356


>gi|91228927|ref|ZP_01262825.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269965455|ref|ZP_06179574.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
 gi|91187510|gb|EAS73844.1| peptide chain release factor 1 [Vibrio alginolyticus 12G01]
 gi|269829934|gb|EEZ84164.1| Peptide chain release factor 1 [Vibrio alginolyticus 40B]
          Length = 362

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVIQEHQADQLAALA 359


>gi|32033818|ref|ZP_00134103.1| COG0216: Protein chain release factor A [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307249197|ref|ZP_07531194.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307260449|ref|ZP_07542144.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306858721|gb|EFM90780.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306869852|gb|EFN01634.1| Peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|343510411|ref|ZP_08747644.1| peptide chain release factor 1 [Vibrio scophthalmi LMG 19158]
 gi|342802324|gb|EGU37758.1| peptide chain release factor 1 [Vibrio scophthalmi LMG 19158]
          Length = 362

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 209/289 (72%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDAEMREMAQEEIKDAKESIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           ++F+MY ++++KKGW+ EV+   ES+  GYKE  A ++G G YG LKFESG HRVQRVP 
Sbjct: 132 NLFRMYSKFAEKKGWRVEVMSSNESEQGGYKEMIAKVTGDGAYGVLKFESGGHRVQRVPE 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA++VL A++ + E++R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMQVLAARIVQAEQARRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLASLIDPVIQEHQADQLAALA 359


>gi|358635920|dbj|BAL23217.1| peptide chain release factor 1 [Azoarcus sp. KH32C]
          Length = 359

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/289 (49%), Positives = 205/289 (70%), Gaps = 2/289 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ ++A  EL         L+  L ++LLP+D  D+R+  LEVRAGTGG+EA+LFA D
Sbjct: 71  DPELRELAESELEEGAARIASLEGELQRALLPRDPNDDRNLFLEVRAGTGGDEAALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY RY++++ WK EVV  +ESDL GYKE    + G G Y KLKFESG HRVQRVP T
Sbjct: 131 LLRMYTRYAERQRWKVEVVSASESDLGGYKEVIVRVLGAGAYSKLKFESGGHRVQRVPTT 190

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE++ V +   DLRIDT+R+ G+GGQH N T+SAVR+TH+P
Sbjct: 191 ETQGRIHTSACTVAVMPEADEIEAVNINPADLRIDTFRASGAGGQHINKTDSAVRITHLP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QD+RSQH N+A+A+ VL A++++M+        +  R   +GSGDRSERIRTY
Sbjct: 251 TGIVVECQDDRSQHRNRAQAMSVLAARIHDMQLREQQAKEAATRKSLVGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           NFPQGRVTDHR+ +T + +  +M+GE +D  + AL  + + + +A+  +
Sbjct: 311 NFPQGRVTDHRINLTLYKLDAVMQGE-IDELVQALTAEHQAEQLAALAN 358


>gi|152991659|ref|YP_001357380.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
 gi|166223612|sp|A6Q6B4.1|RF1_SULNB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|151423520|dbj|BAF71023.1| peptide chain release factor 1 [Sulfurovum sp. NBC37-1]
          Length = 355

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 142/291 (48%), Positives = 205/291 (70%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D+++ D+A EEL        +L+  +   ++PKD  D+++  LE+RAG GG+E++L
Sbjct: 64  ELLSDEELGDLAKEELSELEPMLPKLEEEIKILMIPKDKNDDKNIFLELRAGAGGDESAL 123

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  DVF+MY RY+++ GWK E+V   +    GYKE  A I G GVY +LK+E+G HRVQR
Sbjct: 124 FVADVFRMYSRYAEQMGWKVEIVSTNDGTAGGYKELIAEIKGQGVYSQLKYEAGTHRVQR 183

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GRVHTSA++VA++P+ D+V+V ++  ++++D YRS G GGQ  NTT+SAVR+T
Sbjct: 184 VPDTETQGRVHTSAITVAVIPEVDDVEVDIKPNEVKMDVYRSSGCGGQSVNTTDSAVRLT 243

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           HIPTG+ ++IQDE+SQH N+ KA+KVL A++YE E  +     +  R  Q+GSGDRSE+I
Sbjct: 244 HIPTGIVVAIQDEKSQHKNRDKAMKVLKARVYESELQKQLDETAGQRKLQVGSGDRSEKI 303

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQ R+TDHR+G+T +A+ D+M   NL + ID L+   + +AI   G
Sbjct: 304 RTYNYPQNRLTDHRIGLTLYALDDVMNNGNLKLVIDPLIAHAQTEAIQEAG 354


>gi|296313476|ref|ZP_06863417.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
 gi|296839995|gb|EFH23933.1| peptide chain release factor 1 [Neisseria polysaccharea ATCC 43768]
          Length = 358

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|110598269|ref|ZP_01386544.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
 gi|110340077|gb|EAT58577.1| peptide chain release factor 1 [Chlorobium ferrooxidans DSM 13031]
          Length = 357

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/289 (51%), Positives = 207/289 (71%), Gaps = 3/289 (1%)

Query: 13  EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
           E+D  K L+ +   D +M ++   E+     +   L+  L   LLPKD+AD R+ I+E+R
Sbjct: 57  ELDQSKKLL-DSESDPEMRELVQAEISELQKKLPELEQHLKVLLLPKDEADSRNVIVEIR 115

Query: 73  AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG-YKEASAAISGVGVYGKL 131
           AGTGGEEA+LFA D+ +MY+RY++K+GWK EV+   ES + G ++E +  +SG  VYG +
Sbjct: 116 AGTGGEEAALFAADILRMYQRYAEKQGWKCEVLHYNESSMPGGFREITLEVSGHDVYGTM 175

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE  GR+HTSAVSVA+LP+A+EVDV +R EDLR DTYRSGG GGQ+
Sbjct: 176 KYESGVHRVQRVPDTETQGRIHTSAVSVAVLPEAEEVDVEIRREDLRFDTYRSGGKGGQN 235

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            N   +AVR+TH+PTG+  + Q+ERSQ  NK +A+K+L  KLY++  +     R+ LR  
Sbjct: 236 VNKVETAVRITHMPTGIVSACQEERSQLQNKERAMKMLRTKLYDILLAEQVQQRADLRRS 295

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            + +GDRS +IRTYN+PQ RVTDHR+G T HA+  +++GE  DI IDAL
Sbjct: 296 MVTTGDRSAKIRTYNYPQSRVTDHRIGFTSHALPQILQGEIQDI-IDAL 343


>gi|91785343|ref|YP_560549.1| peptide chain release factor 1 [Burkholderia xenovorans LB400]
 gi|119361518|sp|Q13TU2.1|RF1_BURXL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|91689297|gb|ABE32497.1| bacterial peptide chain release factor 1 (bRF-1) [Burkholderia
           xenovorans LB400]
          Length = 360

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 205/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  A +   +L + L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E++  +ESDL GYKE    I+G   Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK +ALKVL A++ + +        +  R   IGSGDRSER
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRLTDHRINLTLYRLDAIMDG-DLDELIAALVSEHQAELLASLG 357


>gi|254230550|ref|ZP_04923918.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262394972|ref|YP_003286826.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|151936922|gb|EDN55812.1| peptide chain release factor 1 [Vibrio sp. Ex25]
 gi|262338566|gb|ACY52361.1| peptide chain release factor 1 [Vibrio sp. Ex25]
          Length = 362

 Score =  305 bits (782), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVIQEHQADQLAALA 359


>gi|238919470|ref|YP_002932985.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
           93-146]
 gi|259585221|sp|C5B814.1|RF1_EDWI9 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238869039|gb|ACR68750.1| peptide chain release factor 1, putative [Edwardsiella ictaluri
           93-146]
          Length = 360

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/289 (51%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M DMA EEL  A      L+  L   LLPKD  DERDC LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMRDMAQEELKEARGRLAELEQQLQILLLPKDPDDERDCFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++  +E +  GYKE  A +SG G YG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEARRWRIEIMSASEGEHGGYKEVIARVSGDGAYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P   E ++ ++   DLRIDTYRS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPAVPEAELPQINPADLRIDTYRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++   E ++     +  R   +GSGDRS+R+RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLGARIRAAEIAKRQQEEASTRRNLLGSGDRSDRVRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + + ++MEG+ LD  I+ ++ + + D +++  
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDNLIEPIVQEHQADQLSALA 357


>gi|452944167|ref|YP_007500332.1| peptide chain release factor 1 [Hydrogenobaculum sp. HO]
 gi|452882585|gb|AGG15289.1| peptide chain release factor 1 [Hydrogenobaculum sp. HO]
          Length = 356

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/303 (50%), Positives = 216/303 (71%), Gaps = 11/303 (3%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEEL-CLAIDEEKRLQSL--LLKSLLPKDDADERDCI 68
           K+I+  K L+    +DKD+ ++A +EL  L I   K LQ    L+  L PKD  D ++ I
Sbjct: 61  KDIEDTKELL----KDKDLRELAEKELENLNI---KLLQKEKELINVLTPKDANDSKNVI 113

Query: 69  LEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVY 128
           LE+RAG GGEEA+LFA D+ +MY+RY+++KGWKF ++   ++ L GYKE   +I G  VY
Sbjct: 114 LEIRAGAGGEEAALFAADLLRMYQRYAERKGWKFNILEANKTGLGGYKEVIVSIEGKNVY 173

Query: 129 GKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSG 188
             LK+ESG+HRVQRVP+TE  GR+HTS ++VA+LP+ADE +V +  +DLRI+T+R+ G+G
Sbjct: 174 SHLKYESGVHRVQRVPITESGGRIHTSTITVAVLPEADETEVIINPQDLRIETFRASGAG 233

Query: 189 GQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKL 248
           GQ+ NTT SAVR+THIPTG++IS QDERSQ  NK KA+++L A+L +    +      K 
Sbjct: 234 GQYVNTTESAVRITHIPTGISISCQDERSQLQNKLKAMRILYARLKDFYEKQKKEETDKE 293

Query: 249 RSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDA 308
           R EQ+G+G+RSE+IRTYNF Q RVTDHR+ +T H + D+++G +LD  I AL  ++  + 
Sbjct: 294 RKEQVGTGERSEKIRTYNFSQNRVTDHRINLTLHKLQDVLDG-DLDDIISALQAKELEEK 352

Query: 309 IAS 311
           +AS
Sbjct: 353 LAS 355


>gi|51596331|ref|YP_070522.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           32953]
 gi|81639458|sp|Q66AX5.1|RF1_YERPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|51589613|emb|CAH21243.1| peptide chain release factor RF-1 [Yersinia pseudotuberculosis IP
           32953]
          Length = 360

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 218/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
             E R+ Q +I+  + ++    +D +M +MA EEL +A    + L+  L   LLPKD  D
Sbjct: 52  FKEWRSAQDDIEAAEMML----DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ERDC LE+RAGTGG+EA++FA D+F+MY RY++ + WK E++  +E +  GYKE  A IS
Sbjct: 108 ERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEVIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTY 182
           G GV+G+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E ++   N  DLRIDT+
Sbjct: 168 GDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH NKAKA+ VL A++   E  +  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           L+ +  R   +G+GDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I  ++ 
Sbjct: 288 LAEASERRNLLGTGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIQPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +++ 
Sbjct: 347 EYQADQLSAL 356


>gi|313202185|ref|YP_004040843.1| peptide chain release factor 1 [Methylovorus sp. MP688]
 gi|312441501|gb|ADQ85607.1| peptide chain release factor 1 [Methylovorus sp. MP688]
          Length = 356

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/291 (52%), Positives = 208/291 (71%), Gaps = 8/291 (2%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M   A EE+       + +   L K LLPKD  DER+  LE+RAGTGG+E++LFA D
Sbjct: 67  DPEMKAFAQEEIEAGKARLEEIAMALQKLLLPKDPNDERNIFLEIRAGTGGDESALFAGD 126

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++++ WK EVV  +ES++ GYKE  A I G G Y KLKFESG HRVQRVP T
Sbjct: 127 LFRMYSRYAERQRWKVEVVSASESEVGGYKEIIAKIEGFGAYSKLKFESGGHRVQRVPET 186

Query: 147 EKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA+LP+ DEV DV +   D+RIDT+R+ G+GGQH N T+SAVR+TH P
Sbjct: 187 ETQGRIHTSACTVAVLPEVDEVSDVTINPADIRIDTFRASGAGGQHINKTDSAVRITHFP 246

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ---IGSGDRSERI 262
           TG+ +  QD RSQH NKA+A++VL A++   +  +++  +SK+ SE+   IGSGDRSERI
Sbjct: 247 TGIVVECQDGRSQHSNKAQAMQVLAARI---KAKQVNEQQSKIASERRSLIGSGDRSERI 303

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           RTYN+PQGR+TDHR+ +T + I  + EG ++D  I+AL  + + D +A+ G
Sbjct: 304 RTYNYPQGRITDHRINLTLYKIDAITEG-DMDELINALANEHQADLLATLG 353


>gi|225848358|ref|YP_002728521.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644346|gb|ACN99396.1| peptide chain release factor 1 [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 360

 Score =  305 bits (782), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/262 (53%), Positives = 199/262 (75%), Gaps = 9/262 (3%)

Query: 55  SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
           + LPKD  DE++ ILE+R GTGGEEA+LFA ++F+MY+RY+++ GWK EV+ +  +D  G
Sbjct: 102 AFLPKDPNDEKNVILEIRQGTGGEEAALFAAELFRMYQRYAERHGWKTEVLSIHPTDRGG 161

Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
            KE  A I G G Y +LK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+A+EVD+ ++ 
Sbjct: 162 VKEVIALIKGKGAYSRLKYESGVHRVQRVPETESSGRIHTSTATVAVLPEAEEVDIEIKP 221

Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
           EDL+I+T R+GG+GGQH NTT+SAVR+TH+PTG+ +  QDERSQ  NK KA+++L A+L 
Sbjct: 222 EDLKIETMRAGGAGGQHVNTTDSAVRITHLPTGIVVQCQDERSQLQNKLKAMQILRARLK 281

Query: 235 E----MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEG 290
           +    +ER +I    +K R EQ+G+G+RSE+IRTYNFPQ RVTDHRV  T + I+D+++G
Sbjct: 282 DYYDRLEREKI----AKERKEQVGTGERSEKIRTYNFPQNRVTDHRVNYTSYRINDILDG 337

Query: 291 ENLDIFIDALLLQQEMDAIASF 312
            +LD  I+ L+ ++  + +A  
Sbjct: 338 -DLDEIIEVLIAKENEEKLAKL 358


>gi|70725918|ref|YP_252832.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
 gi|119361616|sp|Q4L7Z9.1|RF1_STAHJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|68446642|dbj|BAE04226.1| peptide chain release factor 1 [Staphylococcus haemolyticus
           JCSC1435]
          Length = 358

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 153/311 (49%), Positives = 221/311 (71%), Gaps = 11/311 (3%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEE---LCLAIDE-EKRLQSLLLKSLLPKDDAD 63
           ++K++EI  +  ++ E +EDK+ ++M  EE   L  AI E E++L+ LL+    PKD  D
Sbjct: 52  KSKKEEIAEIDEMLNE-TEDKEEIEMLKEESASLKSAIPELEEQLKFLLI----PKDPND 106

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           E+D I+E+RA  GG+EA++FA D+ +MY +Y++ + +K E+V   ESD  GYKE S ++S
Sbjct: 107 EKDVIVEIRAAAGGDEAAIFAGDLLRMYSKYAESQNFKTEIVEAAESDHGGYKEISFSVS 166

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
           G G Y KLKFE+G HRVQRVP TE  GR+HTS  +VA+LP+ ++V++ +RNEDL+IDTYR
Sbjct: 167 GSGAYSKLKFENGAHRVQRVPETESGGRIHTSTATVAVLPEVEDVEIEIRNEDLKIDTYR 226

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SAVR+TH+PTG+ I+   E+SQ  N+ KALKVL A+LY+M+      
Sbjct: 227 SSGAGGQHVNTTDSAVRITHLPTGV-IATSSEKSQIQNREKALKVLKARLYDMKLQEEQQ 285

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
             +  R   +G+GDRSER+RTYN+PQ RVTDHR+G+T   +  +MEG+ LD  IDAL L 
Sbjct: 286 KYAAQRKSAVGTGDRSERVRTYNYPQSRVTDHRIGLTLQKLDQIMEGK-LDEIIDALTLS 344

Query: 304 QEMDAIASFGS 314
           ++ + +    +
Sbjct: 345 EQTEKLKELNN 355


>gi|392307375|ref|ZP_10269909.1| peptide chain release factor 1 [Pseudoalteromonas citrea NCIMB
           1889]
          Length = 361

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 205/288 (71%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM +MA EE   A     +L+  L   +LPKD  D  +  LEVRAGTGG+EA++FA D
Sbjct: 73  DPDMREMAQEEYKEAKASIVQLEDDLQVLMLPKDPKDNNNVFLEVRAGTGGDEAAIFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + WK E+V V E +  GY+E  A ISG GVYGKLKFESG HRVQRVP T
Sbjct: 133 LFRMYSRYAETQKWKIEIVSVNEGEHGGYREVIANISGDGVYGKLKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GRVHTSA +VA++ +  E + +++ + DL++DT+R+ G+GGQH N T+SA+R+TH+P
Sbjct: 193 ESQGRVHTSACTVAVMAEVPEAEAIQINSADLKVDTFRASGAGGQHVNKTDSAIRITHLP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH N+AKA+ VL A+L + E  +   + +  R   +GSGDRSERIRTY
Sbjct: 253 TGVVVECQDERSQHKNRAKAMSVLGARLQQAEDEKRQAAEASERRNLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           N+PQGR+TDHR+ +T + +++++ GE L   +D LLL+ + D +A+ G
Sbjct: 313 NYPQGRITDHRINLTLYRLNEIVAGE-LGAIVDPLLLEHQADLLAAMG 359


>gi|126209498|ref|YP_001054723.1| peptide chain release factor 1 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|126098290|gb|ABN75118.1| Peptide chain release factor 1 (RF-1) [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 333

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 43  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 102

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 103 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 162

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 163 TESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITHI 222

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 223 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 282

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 283 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 329


>gi|71736680|ref|YP_273268.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482007|ref|ZP_05636048.1| peptide chain release factor 1 [Pseudomonas syringae pv. tabaci
           str. ATCC 11528]
 gi|289627918|ref|ZP_06460872.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. NCPPB 3681]
 gi|289647287|ref|ZP_06478630.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|416014623|ref|ZP_11562373.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|416029124|ref|ZP_11572013.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|422406646|ref|ZP_16483670.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|422584076|ref|ZP_16659191.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|422598325|ref|ZP_16672588.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|422604205|ref|ZP_16676222.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
           301020]
 gi|119361578|sp|Q48MV4.1|RF1_PSE14 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|71557233|gb|AAZ36444.1| peptide chain release factor 1 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159707|gb|EFI00749.1| Peptide chain release factor 1 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320325690|gb|EFW81751.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320327391|gb|EFW83405.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330868898|gb|EGH03607.1| peptide chain release factor 1 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|330881882|gb|EGH16031.1| peptide chain release factor 1 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330887864|gb|EGH20525.1| peptide chain release factor 1 [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988605|gb|EGH86708.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 217/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  +L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYQQLIRVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ANAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|261493250|ref|ZP_05989777.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496507|ref|ZP_05992887.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307710|gb|EEY09033.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261311100|gb|EEY12276.1| peptide chain release factor RF1 [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|153939567|ref|YP_001389502.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|168182252|ref|ZP_02616916.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|170755459|ref|YP_001779766.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|384460586|ref|YP_005673181.1| peptide chain release factor 1 [Clostridium botulinum F str.
           230613]
 gi|387816368|ref|YP_005676712.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
 gi|429247092|ref|ZP_19210368.1| peptide chain release factor 1 [Clostridium botulinum CFSAN001628]
 gi|166223550|sp|A7G9P2.1|RF1_CLOBL RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229576659|sp|B1IE21.1|RF1_CLOBK RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|152935463|gb|ABS40961.1| peptide chain release factor 1 [Clostridium botulinum F str.
           Langeland]
 gi|169120671|gb|ACA44507.1| peptide chain release factor 1 [Clostridium botulinum B1 str. Okra]
 gi|182674565|gb|EDT86526.1| peptide chain release factor 1 [Clostridium botulinum Bf]
 gi|295317603|gb|ADF97980.1| peptide chain release factor 1 [Clostridium botulinum F str.
           230613]
 gi|322804409|emb|CBZ01959.1| peptide chain release factor 1 [Clostridium botulinum H04402 065]
 gi|428755945|gb|EKX78540.1| peptide chain release factor 1 [Clostridium botulinum CFSAN001628]
          Length = 358

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 222/311 (71%), Gaps = 8/311 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEE---LCLAIDEEKRLQSLLLKSLLPKDDA 62
           E +  Q++++  K ++ E S DK++ +MA EE   L L +++ +R  ++LL   LPKD  
Sbjct: 50  EYKKAQEDLESDKEMLKEES-DKELREMAQEEIKELTLKLEDLERELTILL---LPKDPN 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D++D  +E+RAG GGEEA+LFA ++ +MY RY+++K WK E + +  +D+ G+KE + AI
Sbjct: 106 DDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAI 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+ D+VD+ +   DLRID Y
Sbjct: 166 KGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVY 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G GGQ  NTT+SAVR+TH+PTG+ ++ QDE+SQ  NK KA+KVL A+L+E   +   
Sbjct: 226 RASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERA 285

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            S ++ R  Q+G+GDRSERIRTYN+PQGR+TDHR+G+T + +   ++G ++D  I+AL+ 
Sbjct: 286 ASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDG-DIDEVIEALVT 344

Query: 303 QQEMDAIASFG 313
           + + + +   G
Sbjct: 345 EDQAEKMKDLG 355


>gi|429085189|ref|ZP_19148168.1| Peptide chain release factor 1 [Cronobacter condimenti 1330]
 gi|426545653|emb|CCJ74209.1| Peptide chain release factor 1 [Cronobacter condimenti 1330]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/288 (51%), Positives = 208/288 (72%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M DMA +EL  A ++ + L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA D
Sbjct: 71  DPEMRDMAQDELLEAKEKSEALEQQLQLLLLPKDPDDERNAFLEVRAGTGGDEAALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + W+ E++  +E +  GYKE  A ISG G YG+LKFESG HRVQRVP T
Sbjct: 131 LFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGDGAYGRLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+P
Sbjct: 191 ESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RTY
Sbjct: 251 TGIVVECQDERSQHKNKAKALAVLGARIHAAEAAKRQQAEASTRRNLLGSGDRSDRNRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGRVTDHR+ +T + + ++MEG+ LD  I+ ++ + + D +A+  
Sbjct: 311 NFPQGRVTDHRINLTLYRLDEVMEGK-LDALIEPIIQEHQADQLAALA 357


>gi|61252075|sp|P43917.2|RF1_HAEIN RecName: Full=Peptide chain release factor 1; Short=RF-1
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 73  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 128

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP
Sbjct: 129 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 188

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 189 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 248

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 249 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 308

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 309 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|255262532|ref|ZP_05341874.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
 gi|255104867|gb|EET47541.1| peptide chain release factor 1 [Thalassiobium sp. R2A62]
          Length = 351

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 144/287 (50%), Positives = 206/287 (71%), Gaps = 2/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM ++A EEL +       ++  L  +LLPKD AD R  ++E+R GTGG+EA+LFA D
Sbjct: 66  DPDMKELAEEELPMLRARLPEIEQNLQIALLPKDAADARPAMIEIRPGTGGDEAALFAGD 125

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           + +MY+RY++ +GW FE++    ++L G KE +A + G GV+ ++K+ESG+HRVQRVP T
Sbjct: 126 LLRMYQRYAEARGWTFEIIEEQSTELGGIKEVTAHVKGEGVFARMKYESGVHRVQRVPTT 185

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+A++VD+++   DLRIDT R+ GSGGQH NTT+SAVR+THIP+
Sbjct: 186 ESGGRIHTSAATVAVLPEAEDVDIQIDPGDLRIDTMRASGSGGQHVNTTDSAVRITHIPS 245

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ + +  E+SQH N+  A+  L  +LY+ ER R+   RS  R+ QIGSGDRSERIRTYN
Sbjct: 246 GIVV-VSSEKSQHRNREIAMLTLKTRLYDAERQRVDGERSADRAAQIGSGDRSERIRTYN 304

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGR+TDHR+ +T + +  +M+G +LD  I+AL    +   +A  G
Sbjct: 305 FPQGRMTDHRINLTLYKLDQVMQG-DLDETIEALTADAQATLMAEMG 350


>gi|113869288|ref|YP_727777.1| peptide chain release factor 1 [Ralstonia eutropha H16]
 gi|113528064|emb|CAJ94409.1| protein chain release factor A (RF-1) [Ralstonia eutropha H16]
          Length = 356

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M D A +E+  A    + L++ L + LLPKD  D+R+ +LE+RAGTGGEE++LFA 
Sbjct: 66  DDPEMKDFAADEIASARARLEGLEASLQRLLLPKDPNDDRNLLLEIRAGTGGEESALFAG 125

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY RY++++ W+ EV+  + SDL GYKE    I+G   + +LKFESG HRVQRVP 
Sbjct: 126 DLLRMYTRYAERQRWQVEVMSESASDLGGYKEVIVRIAGDAAFSRLKFESGGHRVQRVPA 185

Query: 146 TEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADEV +V +   DLRIDT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 186 TEAQGRIHTSACTVAVMPEADEVGEVEINPADLRIDTFRASGAGGQHVNKTDSAVRLTHL 245

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QD+RSQH NK KA+KVL A++ +M+        +  R   IGSGDRS+RIRT
Sbjct: 246 PTGIVVECQDDRSQHRNKDKAMKVLAARIKDMQTRAAQAKEASTRRNLIGSGDRSDRIRT 305

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + I  +M+G ++D  + AL  + + D +A+ G
Sbjct: 306 YNFPQGRVTDHRINLTLYKIDMIMDG-DMDELLSALASEHQADQLAALG 353


>gi|429769395|ref|ZP_19301505.1| peptide chain release factor 1 [Brevundimonas diminuta 470-4]
 gi|429187059|gb|EKY27979.1| peptide chain release factor 1 [Brevundimonas diminuta 470-4]
          Length = 355

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 137/257 (53%), Positives = 195/257 (75%), Gaps = 2/257 (0%)

Query: 56  LLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGY 115
           L P+D  +    +LEVRAGTGG+EA+LFA D+F+MY RY+  +GW+ E+   TE D  G+
Sbjct: 96  LAPRDADENASAVLEVRAGTGGDEAALFAGDLFRMYSRYASTRGWRVEIDSATEGDAGGF 155

Query: 116 KEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE 175
           KE  A +SG GV+G+LKFESG+HRVQRVP TE  GR+HTSA +VA+LP+ ++V++ + ++
Sbjct: 156 KEIIATVSGEGVFGRLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEVEDVEIEILDK 215

Query: 176 DLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYE 235
           D+RIDT+R+ GSGGQH N T+SAVR+TH+PTG+ ++   E+SQH+N+ KA+K L  +LY+
Sbjct: 216 DIRIDTFRASGSGGQHVNKTDSAVRITHLPTGI-VATSSEKSQHVNRDKAMKNLRIRLYD 274

Query: 236 MERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDI 295
           M+R     +RS  R  Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H++  ++EG +LD 
Sbjct: 275 MQRQAKDAARSDARKSQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHSLPQILEG-DLDP 333

Query: 296 FIDALLLQQEMDAIASF 312
            ++AL+ + +   +A  
Sbjct: 334 MLNALIAEDQAARLADL 350


>gi|329848654|ref|ZP_08263682.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
 gi|328843717|gb|EGF93286.1| peptide chain release factor 1 [Asticcacaulis biprosthecum C19]
          Length = 358

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/286 (50%), Positives = 208/286 (72%), Gaps = 2/286 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D D+  +A EEL    +    L+  +   L PKD  +    ILE+RAGTGG+EA+LFA D
Sbjct: 70  DPDLAPLAEEELGALKESLPDLERGVALLLAPKDKDENASAILELRAGTGGDEAALFAGD 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY+  +GWK EV  ++E +  G+KE  A+++G GV+GKLKFESG+HRVQRVP T
Sbjct: 130 LFRMYSRYAAAQGWKVEVDSLSEGEAGGFKEIIASVTGEGVFGKLKFESGVHRVQRVPAT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VA+LP+A++V++ + ++DLRIDTYRS G+GGQH N T+SAVR+TH+PT
Sbjct: 190 EAGGRIHTSAATVAVLPEAEDVEIEIHDKDLRIDTYRSSGAGGQHVNKTDSAVRITHLPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ ++   E+SQH N+A A++ L A++Y+M+R  +  +RS  R  Q+GSGDRSERIRTYN
Sbjct: 250 GIVVT-SSEKSQHQNRAIAMRNLKARMYDMQRQALDTARSDSRKSQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           +PQGRV+DHR+ +T + +   MEG ++   I+AL+ + + + +A  
Sbjct: 309 YPQGRVSDHRINLTLYNLPQFMEG-DMGQMINALIAEDQAERLAQL 353


>gi|416242626|ref|ZP_11633662.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
 gi|326571210|gb|EGE21234.1| peptide chain release factor 1 [Moraxella catarrhalis BC7]
          Length = 359

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 208/294 (70%), Gaps = 4/294 (1%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M +MA +E+ +A    + L+  L   +LPKD  D+    LE+RAGTGG+EA++
Sbjct: 67  ELLSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAI 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F+ D+F+MY++Y+Q +GW+ EV+   E +  GYKE  A +SG+GVYG+LKFESG HRVQR
Sbjct: 127 FSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVD--VRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           VP TE  GRVHTSA +VA++P+  E+D  V +   DLRIDTYRS G+GGQH NTT+SAVR
Sbjct: 187 VPATESQGRVHTSACTVAVMPEV-EIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +THIPTG+    Q ERSQH NK KA+K+L A++ + +      + S +R   +GSGDRSE
Sbjct: 246 ITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRNLVGSGDRSE 305

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           RIRTYNFPQGR+TDHR+ +T + +  +MEG +L   +D+LL +   D +AS G+
Sbjct: 306 RIRTYNFPQGRMTDHRINLTLYKLDAIMEG-DLTELLDSLLREHHADLMASVGA 358


>gi|261399946|ref|ZP_05986071.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
 gi|269210396|gb|EEZ76851.1| peptide chain release factor 1 [Neisseria lactamica ATCC 23970]
          Length = 358

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|83942386|ref|ZP_00954847.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
 gi|83846479|gb|EAP84355.1| peptide chain release factor 1 [Sulfitobacter sp. EE-36]
          Length = 351

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/316 (48%), Positives = 223/316 (70%), Gaps = 10/316 (3%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKS-------LL 57
           ++LR   ++ID  + L+ +  + + ML    E   LA +E  RL++ L ++       LL
Sbjct: 38  ADLRPVVEQIDAYRQLLQDMDDARAMLK-DPEMAELAEEELPRLKAALPQAEADLQLALL 96

Query: 58  PKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKE 117
           P+D+AD++  +LE+R GTGG+EA+LFA D+ +MY+RY++ +GWK E++    ++L G KE
Sbjct: 97  PRDEADKKPAMLEIRPGTGGDEAALFAADLLRMYQRYAEARGWKVELIEQQFTELGGVKE 156

Query: 118 ASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDL 177
             A I G  V+ +LK+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+ +   DL
Sbjct: 157 VVAHIKGENVFARLKYESGVHRVQRVPSTESGGRIHTSAATVAVLPEAEDVDIHIDANDL 216

Query: 178 RIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEME 237
           RIDT RS G+GGQH NTT+SAVR+TH+PTG+ ++   E+SQH N+  A++VL A+LY+ME
Sbjct: 217 RIDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHRNREIAMQVLKARLYDME 275

Query: 238 RSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFI 297
           R R+   RS  R+ Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +M+G +LD  +
Sbjct: 276 RQRVDSERSASRAAQVGSGDRSERIRTYNFPQGRLTDHRINLTLYRLEAVMQG-DLDEIV 334

Query: 298 DALLLQQEMDAIASFG 313
           DAL    +   +A  G
Sbjct: 335 DALTADAQAQLLAEMG 350


>gi|385800856|ref|YP_005837260.1| peptide chain release factor 1 (bRF-1) [Halanaerobium praevalens
           DSM 2228]
 gi|309390220|gb|ADO78100.1| bacterial peptide chain release factor 1 (bRF-1) [Halanaerobium
           praevalens DSM 2228]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 142/281 (50%), Positives = 202/281 (71%), Gaps = 1/281 (0%)

Query: 21  IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
           + E  +D +M  +  EE+     ++++LQ  L   LLP D  DE++ I+E+RAG GG+EA
Sbjct: 70  MMELDDDPEMQALFEEEIAELKPKKEKLQEQLPIMLLPDDPNDEKNVIVEIRAGAGGDEA 129

Query: 81  SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
           +LFA D+++MY RY++ KGWK +++   ES   G+KE    I G  ++  LK+ESG+HRV
Sbjct: 130 ALFAADLYRMYTRYAEGKGWKVDLMSANESGTGGFKEIIFTIEGTDIFKYLKYESGVHRV 189

Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           QRVP TE SGR+HTS  +VA+LP+A+EVDV +   DL IDT+RS G GGQ  NTT+SA+R
Sbjct: 190 QRVPSTESSGRIHTSTATVAVLPEAEEVDVEIETNDLTIDTFRSSGPGGQSVNTTDSAIR 249

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +TH PTG+T+S QDE+SQH NKAKA+K+L A+L E +       RS+ R  Q+G+GDRSE
Sbjct: 250 ITHEPTGLTVSCQDEKSQHKNKAKAMKILRARLQEKKEQEKQKERSEARKSQVGTGDRSE 309

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           +IRTYNFPQGRV+DHR+ +T H +  +++GE L+  ++AL+
Sbjct: 310 KIRTYNFPQGRVSDHRINLTIHQLDKILDGE-LEPVVEALI 349


>gi|149377994|ref|ZP_01895719.1| peptide chain release factor 1 [Marinobacter algicola DG893]
 gi|149357703|gb|EDM46200.1| peptide chain release factor 1 [Marinobacter algicola DG893]
          Length = 361

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 202/288 (70%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM  MA EEL LA  + + L   L + +LPKD  D ++  LEVRAGTGG+EA++FA D
Sbjct: 73  DADMRAMAEEELGLAEQKGEELDEELQRLMLPKDPNDGKNVFLEVRAGTGGDEAAIFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +FKMY RY++++ W+ EV+  +E +  GYKE  A I+G  VYG LKFESG HRVQRVP T
Sbjct: 133 LFKMYMRYAERQRWQVEVISASEGEHGGYKEVIARIAGSAVYGALKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE + V +   DLR+DT+R+ G+GGQH N T+SA+R+THIP
Sbjct: 193 ESQGRIHTSACTVAVMPEADETEAVEINKSDLRVDTFRASGAGGQHVNKTDSAIRITHIP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  Q+ERSQH N+AKA+  L ++L   E  R   + +  R   +GSGDRSERIRTY
Sbjct: 253 TGIVVECQEERSQHKNRAKAMSFLASRLQNEEIERQQKTMAATRKSLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGRVTDHR+ +T + + +++ G +LD  I  L  + + D +AS  
Sbjct: 313 NFPQGRVTDHRINLTLYKLDEVISG-DLDAVIMPLQQEHQADLLASLA 359


>gi|359298769|ref|ZP_09184608.1| peptide chain release factor 1 [Haemophilus [parainfluenzae] CCUG
           13788]
 gi|402306985|ref|ZP_10826018.1| peptide chain release factor 1 [Haemophilus sputorum HK 2154]
 gi|400373829|gb|EJP26756.1| peptide chain release factor 1 [Haemophilus sputorum HK 2154]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|16273461|ref|NP_439710.1| peptide chain release factor 1 [Haemophilus influenzae Rd KW20]
 gi|145631803|ref|ZP_01787563.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145637543|ref|ZP_01793200.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145642039|ref|ZP_01797610.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|148826083|ref|YP_001290836.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229844233|ref|ZP_04464374.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|229847123|ref|ZP_04467228.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|260580342|ref|ZP_05848171.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260583304|ref|ZP_05851079.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|319897179|ref|YP_004135374.1| peptide chain release factor rf-1 [Haemophilus influenzae F3031]
 gi|342904362|ref|ZP_08726163.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21621]
 gi|373467385|ref|ZP_09558684.1| peptide chain release factor 1 [Haemophilus sp. oral taxon 851 str.
           F0397]
 gi|378697782|ref|YP_005179740.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
 gi|1574404|gb|AAC23209.1| peptide chain release factor 1 (prfA) [Haemophilus influenzae Rd
           KW20]
 gi|144982593|gb|EDJ90143.1| peptide chain release factor 1 [Haemophilus influenzae R3021]
 gi|145269229|gb|EDK09175.1| peptide chain release factor 1 [Haemophilus influenzae PittHH]
 gi|145273219|gb|EDK13094.1| peptide chain release factor 1 [Haemophilus influenzae 22.4-21]
 gi|148716243|gb|ABQ98453.1| peptide chain release factor 1 [Haemophilus influenzae PittEE]
 gi|229809952|gb|EEP45673.1| peptide chain release factor 1 [Haemophilus influenzae 7P49H1]
 gi|229813227|gb|EEP48915.1| peptide chain release factor 1 [Haemophilus influenzae 6P18H1]
 gi|260093019|gb|EEW76953.1| peptide chain release factor 1 [Haemophilus influenzae RdAW]
 gi|260093664|gb|EEW77577.1| peptide chain release factor 1 [Haemophilus influenzae NT127]
 gi|301170298|emb|CBW29904.1| peptide chain release factor RF-1 [Haemophilus influenzae 10810]
 gi|317432683|emb|CBY81046.1| peptide chain release factor RF-1 [Haemophilus influenzae F3031]
 gi|341953602|gb|EGT80106.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21621]
 gi|371758920|gb|EHO47676.1| peptide chain release factor 1 [Haemophilus sp. oral taxon 851 str.
           F0397]
          Length = 361

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|417845579|ref|ZP_12491605.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21639]
 gi|341954648|gb|EGT81121.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21639]
          Length = 361

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKTEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|322513486|ref|ZP_08066596.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
 gi|322120705|gb|EFX92589.1| peptide chain release factor RF1 [Actinobacillus ureae ATCC 25976]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 203/288 (70%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM DMA EE+     E + L+  L   LLPKD  DE +  LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKDMAAEEIAENKAEIENLEQHLQILLLPKDPNDEYNAFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY + K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYCESKRWRIEEMSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ R    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLASRIVQVEQERQAAEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGR+TDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRITDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|300871300|ref|YP_003786173.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
 gi|300689001|gb|ADK31672.1| peptide chain release factor 1 [Brachyspira pilosicoli 95/1000]
          Length = 358

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/307 (47%), Positives = 216/307 (70%), Gaps = 1/307 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           +L+T  KEI+    ++     DK++ +MA  E+     +++ + + L   LLPKD  D +
Sbjct: 51  KLKTVLKEIEDANEMLNHSDTDKELKNMALLEIEELNQKKENIINDLRLLLLPKDKNDGK 110

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + I+E+R GTGG+E++LF  D+F+MY R+ ++  +K E++ ++ ++L GYKE   ++SG 
Sbjct: 111 NIIVEIRVGTGGDESALFVGDLFRMYSRFIERANFKMEIIDISPTELGGYKEVIFSVSGK 170

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
             Y  LKFESG HRVQR+P TE  GR+HTSA +VAI+P+A+E DV +++ED+R+D +RS 
Sbjct: 171 NAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAIMPEAEESDVIIKDEDIRVDIFRSS 230

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL A++YE E +      
Sbjct: 231 GPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKE 290

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
            K R ++IGSGDRSERIRTYNFPQ RVTDHR+ +T + +   M+GE  +I  DAL  +++
Sbjct: 291 DKERRDKIGSGDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEI-TDALFKKEQ 349

Query: 306 MDAIASF 312
            + +AS+
Sbjct: 350 EELLASY 356


>gi|398992801|ref|ZP_10695762.1| peptide chain release factor 1 [Pseudomonas sp. GM21]
 gi|398136257|gb|EJM25349.1| peptide chain release factor 1 [Pseudomonas sp. GM21]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 216/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L++ L + LLPKD  D R+  LE
Sbjct: 59  QSDLEGAQALLKDS--DPDMREMAVEEVREAKEQLIELEASLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|451971712|ref|ZP_21924929.1| peptide chain release factor 1 [Vibrio alginolyticus E0666]
 gi|451932442|gb|EMD80119.1| peptide chain release factor 1 [Vibrio alginolyticus E0666]
          Length = 362

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/289 (50%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEVKEAKATIERLTDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++K+GW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKRGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E D+  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEADLPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E  R     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIVQAEEERRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTIYRLNEVMEG-DLQSLIDPVIQEHQADQLAALA 359


>gi|217033144|ref|ZP_03438604.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298736978|ref|YP_003729508.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
 gi|216945129|gb|EEC23827.1| hypothetical protein HPB128_185g4 [Helicobacter pylori B128]
 gi|298356172|emb|CBI67044.1| peptide chain release factor RF-1 [Helicobacter pylori B8]
          Length = 352

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 207/279 (74%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L A+LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKARLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   +LD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGSLDEVINPLI 344


>gi|167993219|ref|ZP_02574314.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205328702|gb|EDZ15466.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKCQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 356


>gi|170768314|ref|ZP_02902767.1| peptide chain release factor 1 [Escherichia albertii TW07627]
 gi|170123080|gb|EDS92011.1| peptide chain release factor 1 [Escherichia albertii TW07627]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +EL  A ++ ++L+  L   LLPKD  DERD  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERDAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++  +E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAETRRWQVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIEPIVQEHQADQLAAL 356


>gi|375264713|ref|YP_005022156.1| peptide chain release factor 1 [Vibrio sp. EJY3]
 gi|369840037|gb|AEX21181.1| peptide chain release factor 1 [Vibrio sp. EJY3]
          Length = 362

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 207/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A    +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKEAKATIERLADELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY +Y++KKGW+ EV+   E++  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKYAEKKGWRIEVMSSNEAEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E ++  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E ++     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG +L   ID ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLNEVMEG-DLQSLIDPVVQEHQADQLAALA 359


>gi|417842059|ref|ZP_12488154.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19501]
 gi|341947839|gb|EGT74480.1| Peptide chain release factor 1 [Haemophilus haemolyticus M19501]
          Length = 361

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDIRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|386265998|ref|YP_005829490.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
 gi|309973234|gb|ADO96435.1| Peptide chain release factor 1 [Haemophilus influenzae R2846]
          Length = 361

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPKLPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEIMNGK-IDELIQPIITEYQADQLAAL 357


>gi|420406039|ref|ZP_14905212.1| peptide chain release factor 1 [Helicobacter pylori CPY6271]
 gi|393021858|gb|EJB22988.1| peptide chain release factor 1 [Helicobacter pylori CPY6271]
          Length = 352

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 206/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIKKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY +LKFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRLKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPGTESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L  +LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|418845138|ref|ZP_13399924.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. CVM 19443]
 gi|392813947|gb|EJA69911.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Newport str. CVM 19443]
          Length = 360

 Score =  305 bits (781), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 213/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP+
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPV 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 356


>gi|296113010|ref|YP_003626948.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|416156064|ref|ZP_11604303.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
 gi|416217640|ref|ZP_11624373.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
 gi|416230455|ref|ZP_11628421.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
 gi|416235687|ref|ZP_11630287.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
 gi|416240552|ref|ZP_11632523.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
 gi|416246745|ref|ZP_11635203.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
 gi|416251199|ref|ZP_11637607.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
 gi|416254756|ref|ZP_11638858.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
 gi|421779840|ref|ZP_16216330.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
 gi|295920704|gb|ADG61055.1| peptide chain release factor 1 [Moraxella catarrhalis BBH18]
 gi|326560389|gb|EGE10771.1| peptide chain release factor 1 [Moraxella catarrhalis 7169]
 gi|326561241|gb|EGE11604.1| peptide chain release factor 1 [Moraxella catarrhalis 46P47B1]
 gi|326564062|gb|EGE14306.1| peptide chain release factor 1 [Moraxella catarrhalis 12P80B1]
 gi|326565872|gb|EGE16034.1| peptide chain release factor 1 [Moraxella catarrhalis BC1]
 gi|326570557|gb|EGE20597.1| peptide chain release factor 1 [Moraxella catarrhalis BC8]
 gi|326573200|gb|EGE23169.1| peptide chain release factor 1 [Moraxella catarrhalis CO72]
 gi|326576112|gb|EGE26028.1| peptide chain release factor 1 [Moraxella catarrhalis 101P30B1]
 gi|326577062|gb|EGE26956.1| peptide chain release factor 1 [Moraxella catarrhalis O35E]
 gi|407812634|gb|EKF83418.1| peptide chain release factor 1 [Moraxella catarrhalis RH4]
          Length = 359

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/294 (51%), Positives = 208/294 (70%), Gaps = 4/294 (1%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M +MA +E+ +A    + L+  L   +LPKD  D+    LE+RAGTGG+EA++
Sbjct: 67  ELLSDPEMKEMALDEIEVARANIETLEERLNVMMLPKDPNDKATAFLEIRAGTGGDEAAI 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F+ D+F+MY++Y+Q +GW+ EV+   E +  GYKE  A +SG+GVYG+LKFESG HRVQR
Sbjct: 127 FSGDLFRMYQKYTQSQGWQVEVLSANEGEHGGYKEIIARVSGIGVYGRLKFESGAHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVD--VRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
           VP TE  GRVHTSA +VA++P+  E+D  V +   DLRIDTYRS G+GGQH NTT+SAVR
Sbjct: 187 VPATESQGRVHTSACTVAVMPEV-EIDDTVEINPSDLRIDTYRSSGAGGQHVNTTDSAVR 245

Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
           +THIPTG+    Q ERSQH NK KA+K+L A++ + +      + S +R   +GSGDRSE
Sbjct: 246 ITHIPTGVVAECQQERSQHANKEKAMKMLVARIQQAKVQAQIDATSDMRRNLVGSGDRSE 305

Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS 314
           RIRTYNFPQGR+TDHR+ +T + +  +MEG +L   +D+LL +   D +AS G+
Sbjct: 306 RIRTYNFPQGRMTDHRINLTLYKLDAIMEG-DLTELLDSLLREHHADLMASVGA 358


>gi|317153066|ref|YP_004121114.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
 gi|316943317|gb|ADU62368.1| peptide chain release factor 1 [Desulfovibrio aespoeensis Aspo-2]
          Length = 355

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/287 (52%), Positives = 201/287 (70%), Gaps = 1/287 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ +MA  E+    D  + L+  +   LLP D  DE++ ILE+RAGTGG+EA LFA D
Sbjct: 69  DPEIREMAKAEISELEDRIETLEEKIKILLLPSDPMDEKNIILEIRAGTGGDEAGLFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +++MY RY++   WK E +    +   G KE  A+I+G  VY KLK+ESG HRVQRVP T
Sbjct: 129 LYRMYTRYAEANRWKVEEMSSNVTGSGGLKEVIASIAGDKVYSKLKYESGTHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS V+VAI+P+A+EVD+ LR ED+R+D +RS G GGQ  NTT+SA+RVTHIPT
Sbjct: 189 ESQGRIHTSVVTVAIMPEAEEVDIDLRPEDVRVDVFRSSGPGGQSVNTTDSAIRVTHIPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           GM +  QDE+SQH NKAKALKVL ++L ++E+ +        R  Q+GSGDRSERIRTYN
Sbjct: 249 GMIVICQDEKSQHKNKAKALKVLRSRLLQLEQDKAKAEEDAARRIQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           FPQGRV+DHR+ +T H +  ++EGE LD   DAL+   + +A+   G
Sbjct: 309 FPQGRVSDHRINLTLHKLPQILEGE-LDDLTDALIGHYQAEAMKRQG 354


>gi|22126175|ref|NP_669598.1| peptide chain release factor 1 [Yersinia pestis KIM10+]
 gi|45441669|ref|NP_993208.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108807397|ref|YP_651313.1| peptide chain release factor 1 [Yersinia pestis Antiqua]
 gi|108811662|ref|YP_647429.1| peptide chain release factor 1 [Yersinia pestis Nepal516]
 gi|145598396|ref|YP_001162472.1| peptide chain release factor 1 [Yersinia pestis Pestoides F]
 gi|149366051|ref|ZP_01888086.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|153947351|ref|YP_001401039.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162421626|ref|YP_001606878.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165926418|ref|ZP_02222250.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938830|ref|ZP_02227384.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009117|ref|ZP_02230015.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210440|ref|ZP_02236475.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401373|ref|ZP_02306870.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420420|ref|ZP_02312173.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424382|ref|ZP_02316135.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170024410|ref|YP_001720915.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186895374|ref|YP_001872486.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|218929128|ref|YP_002347003.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|229894728|ref|ZP_04509908.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|229897428|ref|ZP_04512584.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229898071|ref|ZP_04513222.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901940|ref|ZP_04517061.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|270490877|ref|ZP_06207951.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294503912|ref|YP_003567974.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|384122371|ref|YP_005504991.1| peptide chain release factor 1 [Yersinia pestis D106004]
 gi|384126230|ref|YP_005508844.1| peptide chain release factor 1 [Yersinia pestis D182038]
 gi|384140155|ref|YP_005522857.1| peptide chain release factor 1 [Yersinia pestis A1122]
 gi|384414801|ref|YP_005624163.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
 gi|420546884|ref|ZP_15044827.1| peptide chain release factor 1 [Yersinia pestis PY-01]
 gi|420552212|ref|ZP_15049589.1| peptide chain release factor 1 [Yersinia pestis PY-02]
 gi|420557724|ref|ZP_15054439.1| peptide chain release factor 1 [Yersinia pestis PY-03]
 gi|420563234|ref|ZP_15059309.1| peptide chain release factor 1 [Yersinia pestis PY-04]
 gi|420568276|ref|ZP_15063887.1| peptide chain release factor 1 [Yersinia pestis PY-05]
 gi|420571504|ref|ZP_15066829.1| peptide chain release factor 1 [Yersinia pestis PY-06]
 gi|420579222|ref|ZP_15073808.1| peptide chain release factor 1 [Yersinia pestis PY-07]
 gi|420584590|ref|ZP_15078681.1| peptide chain release factor 1 [Yersinia pestis PY-08]
 gi|420589716|ref|ZP_15083292.1| peptide chain release factor 1 [Yersinia pestis PY-09]
 gi|420595094|ref|ZP_15088136.1| peptide chain release factor 1 [Yersinia pestis PY-10]
 gi|420600716|ref|ZP_15093145.1| peptide chain release factor 1 [Yersinia pestis PY-11]
 gi|420606201|ref|ZP_15098078.1| peptide chain release factor 1 [Yersinia pestis PY-12]
 gi|420611553|ref|ZP_15102899.1| peptide chain release factor 1 [Yersinia pestis PY-13]
 gi|420616942|ref|ZP_15107642.1| peptide chain release factor 1 [Yersinia pestis PY-14]
 gi|420622246|ref|ZP_15112358.1| peptide chain release factor 1 [Yersinia pestis PY-15]
 gi|420627346|ref|ZP_15116984.1| peptide chain release factor 1 [Yersinia pestis PY-16]
 gi|420632462|ref|ZP_15121598.1| peptide chain release factor 1 [Yersinia pestis PY-19]
 gi|420637672|ref|ZP_15126269.1| peptide chain release factor 1 [Yersinia pestis PY-25]
 gi|420643199|ref|ZP_15131285.1| peptide chain release factor 1 [Yersinia pestis PY-29]
 gi|420648419|ref|ZP_15136032.1| peptide chain release factor 1 [Yersinia pestis PY-32]
 gi|420654054|ref|ZP_15141096.1| peptide chain release factor 1 [Yersinia pestis PY-34]
 gi|420659541|ref|ZP_15146027.1| peptide chain release factor 1 [Yersinia pestis PY-36]
 gi|420664834|ref|ZP_15150762.1| peptide chain release factor 1 [Yersinia pestis PY-42]
 gi|420669754|ref|ZP_15155234.1| peptide chain release factor 1 [Yersinia pestis PY-45]
 gi|420675110|ref|ZP_15160105.1| peptide chain release factor 1 [Yersinia pestis PY-46]
 gi|420680701|ref|ZP_15165170.1| peptide chain release factor 1 [Yersinia pestis PY-47]
 gi|420685984|ref|ZP_15169888.1| peptide chain release factor 1 [Yersinia pestis PY-48]
 gi|420691166|ref|ZP_15174463.1| peptide chain release factor 1 [Yersinia pestis PY-52]
 gi|420696954|ref|ZP_15179533.1| peptide chain release factor 1 [Yersinia pestis PY-53]
 gi|420708227|ref|ZP_15188955.1| peptide chain release factor 1 [Yersinia pestis PY-55]
 gi|420713641|ref|ZP_15193802.1| peptide chain release factor 1 [Yersinia pestis PY-56]
 gi|420719099|ref|ZP_15198550.1| peptide chain release factor 1 [Yersinia pestis PY-58]
 gi|420724634|ref|ZP_15203352.1| peptide chain release factor 1 [Yersinia pestis PY-59]
 gi|420730241|ref|ZP_15208368.1| peptide chain release factor 1 [Yersinia pestis PY-60]
 gi|420735271|ref|ZP_15212922.1| peptide chain release factor 1 [Yersinia pestis PY-61]
 gi|420740746|ref|ZP_15217848.1| peptide chain release factor 1 [Yersinia pestis PY-63]
 gi|420746268|ref|ZP_15222610.1| peptide chain release factor 1 [Yersinia pestis PY-64]
 gi|420751884|ref|ZP_15227512.1| peptide chain release factor 1 [Yersinia pestis PY-65]
 gi|420754437|ref|ZP_15229815.1| peptide chain release factor 1 [Yersinia pestis PY-66]
 gi|420762907|ref|ZP_15236764.1| peptide chain release factor 1 [Yersinia pestis PY-71]
 gi|420768119|ref|ZP_15241463.1| peptide chain release factor 1 [Yersinia pestis PY-72]
 gi|420773168|ref|ZP_15246009.1| peptide chain release factor 1 [Yersinia pestis PY-76]
 gi|420778683|ref|ZP_15250894.1| peptide chain release factor 1 [Yersinia pestis PY-88]
 gi|420784280|ref|ZP_15255799.1| peptide chain release factor 1 [Yersinia pestis PY-89]
 gi|420789521|ref|ZP_15260462.1| peptide chain release factor 1 [Yersinia pestis PY-90]
 gi|420795021|ref|ZP_15265415.1| peptide chain release factor 1 [Yersinia pestis PY-91]
 gi|420800077|ref|ZP_15269955.1| peptide chain release factor 1 [Yersinia pestis PY-92]
 gi|420805467|ref|ZP_15274824.1| peptide chain release factor 1 [Yersinia pestis PY-93]
 gi|420810766|ref|ZP_15279604.1| peptide chain release factor 1 [Yersinia pestis PY-94]
 gi|420816343|ref|ZP_15284619.1| peptide chain release factor 1 [Yersinia pestis PY-95]
 gi|420821619|ref|ZP_15289378.1| peptide chain release factor 1 [Yersinia pestis PY-96]
 gi|420826718|ref|ZP_15293945.1| peptide chain release factor 1 [Yersinia pestis PY-98]
 gi|420832416|ref|ZP_15299092.1| peptide chain release factor 1 [Yersinia pestis PY-99]
 gi|420837288|ref|ZP_15303497.1| peptide chain release factor 1 [Yersinia pestis PY-100]
 gi|420842457|ref|ZP_15308181.1| peptide chain release factor 1 [Yersinia pestis PY-101]
 gi|420848104|ref|ZP_15313264.1| peptide chain release factor 1 [Yersinia pestis PY-102]
 gi|420853614|ref|ZP_15318025.1| peptide chain release factor 1 [Yersinia pestis PY-103]
 gi|420858966|ref|ZP_15322653.1| peptide chain release factor 1 [Yersinia pestis PY-113]
 gi|421763506|ref|ZP_16200301.1| peptide chain release factor 1 [Yersinia pestis INS]
 gi|20139332|sp|Q8ZEX8.1|RF1_YERPE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361639|sp|Q1C854.1|RF1_YERPA RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|119361640|sp|Q1CJK1.1|RF1_YERPN RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223619|sp|A4TJN7.1|RF1_YERPP RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166977371|sp|A7FIG1.1|RF1_YERP3 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238687250|sp|A9QZ08.1|RF1_YERPG RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238688460|sp|B1JM85.1|RF1_YERPY RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|238691366|sp|B2K2Z0.1|RF1_YERPB RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21959139|gb|AAM85849.1|AE013831_12 peptide chain release factor RF-1 [Yersinia pestis KIM10+]
 gi|45436531|gb|AAS62085.1| peptide chain release factor 1 [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108775310|gb|ABG17829.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Nepal516]
 gi|108779310|gb|ABG13368.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Antiqua]
 gi|115347739|emb|CAL20654.1| peptide chain release factor 1 [Yersinia pestis CO92]
 gi|145210092|gb|ABP39499.1| bacterial peptide chain release factor 1 (bRF-1) [Yersinia pestis
           Pestoides F]
 gi|149292464|gb|EDM42538.1| peptide chain release factor 1 [Yersinia pestis CA88-4125]
 gi|152958846|gb|ABS46307.1| peptide chain release factor 1 [Yersinia pseudotuberculosis IP
           31758]
 gi|162354441|gb|ABX88389.1| peptide chain release factor 1 [Yersinia pestis Angola]
 gi|165913193|gb|EDR31816.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921639|gb|EDR38836.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991672|gb|EDR43973.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207620|gb|EDR52100.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962115|gb|EDR58136.1| peptide chain release factor 1 [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049069|gb|EDR60477.1| peptide chain release factor 1 [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056264|gb|EDR66033.1| peptide chain release factor 1 [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750944|gb|ACA68462.1| peptide chain release factor 1 [Yersinia pseudotuberculosis YPIII]
 gi|186698400|gb|ACC89029.1| peptide chain release factor 1 [Yersinia pseudotuberculosis PB1/+]
 gi|229680836|gb|EEO76931.1| peptide chain release factor RF-1 [Yersinia pestis Nepal516]
 gi|229689112|gb|EEO81177.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229693765|gb|EEO83814.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229702201|gb|EEO90220.1| peptide chain release factor RF-1 [Yersinia pestis Pestoides A]
 gi|262361967|gb|ACY58688.1| peptide chain release factor 1 [Yersinia pestis D106004]
 gi|262365894|gb|ACY62451.1| peptide chain release factor 1 [Yersinia pestis D182038]
 gi|270339381|gb|EFA50158.1| peptide chain release factor 1 [Yersinia pestis KIM D27]
 gi|294354371|gb|ADE64712.1| peptide chain release factor 1 [Yersinia pestis Z176003]
 gi|320015305|gb|ADV98876.1| peptide chain release factor RF-1 [Yersinia pestis biovar
           Medievalis str. Harbin 35]
 gi|342855284|gb|AEL73837.1| peptide chain release factor 1 [Yersinia pestis A1122]
 gi|391426442|gb|EIQ88623.1| peptide chain release factor 1 [Yersinia pestis PY-01]
 gi|391428162|gb|EIQ90172.1| peptide chain release factor 1 [Yersinia pestis PY-02]
 gi|391429322|gb|EIQ91187.1| peptide chain release factor 1 [Yersinia pestis PY-03]
 gi|391441982|gb|EIR02421.1| peptide chain release factor 1 [Yersinia pestis PY-04]
 gi|391443654|gb|EIR03949.1| peptide chain release factor 1 [Yersinia pestis PY-05]
 gi|391452162|gb|EIR11594.1| peptide chain release factor 1 [Yersinia pestis PY-06]
 gi|391459059|gb|EIR17866.1| peptide chain release factor 1 [Yersinia pestis PY-07]
 gi|391460160|gb|EIR18887.1| peptide chain release factor 1 [Yersinia pestis PY-08]
 gi|391462382|gb|EIR20903.1| peptide chain release factor 1 [Yersinia pestis PY-09]
 gi|391475090|gb|EIR32319.1| peptide chain release factor 1 [Yersinia pestis PY-10]
 gi|391476904|gb|EIR33983.1| peptide chain release factor 1 [Yersinia pestis PY-11]
 gi|391477324|gb|EIR34360.1| peptide chain release factor 1 [Yersinia pestis PY-12]
 gi|391490933|gb|EIR46538.1| peptide chain release factor 1 [Yersinia pestis PY-13]
 gi|391492041|gb|EIR47544.1| peptide chain release factor 1 [Yersinia pestis PY-15]
 gi|391494270|gb|EIR49523.1| peptide chain release factor 1 [Yersinia pestis PY-14]
 gi|391506610|gb|EIR60514.1| peptide chain release factor 1 [Yersinia pestis PY-16]
 gi|391507444|gb|EIR61272.1| peptide chain release factor 1 [Yersinia pestis PY-19]
 gi|391511902|gb|EIR65269.1| peptide chain release factor 1 [Yersinia pestis PY-25]
 gi|391522310|gb|EIR74705.1| peptide chain release factor 1 [Yersinia pestis PY-29]
 gi|391524873|gb|EIR77051.1| peptide chain release factor 1 [Yersinia pestis PY-34]
 gi|391525975|gb|EIR78066.1| peptide chain release factor 1 [Yersinia pestis PY-32]
 gi|391537918|gb|EIR88764.1| peptide chain release factor 1 [Yersinia pestis PY-36]
 gi|391540531|gb|EIR91149.1| peptide chain release factor 1 [Yersinia pestis PY-42]
 gi|391542428|gb|EIR92886.1| peptide chain release factor 1 [Yersinia pestis PY-45]
 gi|391555740|gb|EIS04884.1| peptide chain release factor 1 [Yersinia pestis PY-46]
 gi|391556214|gb|EIS05312.1| peptide chain release factor 1 [Yersinia pestis PY-47]
 gi|391557529|gb|EIS06519.1| peptide chain release factor 1 [Yersinia pestis PY-48]
 gi|391571032|gb|EIS18437.1| peptide chain release factor 1 [Yersinia pestis PY-52]
 gi|391571625|gb|EIS18950.1| peptide chain release factor 1 [Yersinia pestis PY-53]
 gi|391583983|gb|EIS29573.1| peptide chain release factor 1 [Yersinia pestis PY-55]
 gi|391587103|gb|EIS32318.1| peptide chain release factor 1 [Yersinia pestis PY-56]
 gi|391599199|gb|EIS42846.1| peptide chain release factor 1 [Yersinia pestis PY-58]
 gi|391600425|gb|EIS43957.1| peptide chain release factor 1 [Yersinia pestis PY-60]
 gi|391602121|gb|EIS45456.1| peptide chain release factor 1 [Yersinia pestis PY-59]
 gi|391615016|gb|EIS56829.1| peptide chain release factor 1 [Yersinia pestis PY-61]
 gi|391615624|gb|EIS57370.1| peptide chain release factor 1 [Yersinia pestis PY-63]
 gi|391620710|gb|EIS61837.1| peptide chain release factor 1 [Yersinia pestis PY-64]
 gi|391627189|gb|EIS67428.1| peptide chain release factor 1 [Yersinia pestis PY-65]
 gi|391638398|gb|EIS77205.1| peptide chain release factor 1 [Yersinia pestis PY-71]
 gi|391640919|gb|EIS79408.1| peptide chain release factor 1 [Yersinia pestis PY-72]
 gi|391650447|gb|EIS87730.1| peptide chain release factor 1 [Yersinia pestis PY-76]
 gi|391650717|gb|EIS87973.1| peptide chain release factor 1 [Yersinia pestis PY-66]
 gi|391655028|gb|EIS91809.1| peptide chain release factor 1 [Yersinia pestis PY-88]
 gi|391659641|gb|EIS95904.1| peptide chain release factor 1 [Yersinia pestis PY-89]
 gi|391663516|gb|EIS99352.1| peptide chain release factor 1 [Yersinia pestis PY-90]
 gi|391670852|gb|EIT05852.1| peptide chain release factor 1 [Yersinia pestis PY-91]
 gi|391680897|gb|EIT14907.1| peptide chain release factor 1 [Yersinia pestis PY-93]
 gi|391682388|gb|EIT16273.1| peptide chain release factor 1 [Yersinia pestis PY-92]
 gi|391683016|gb|EIT16828.1| peptide chain release factor 1 [Yersinia pestis PY-94]
 gi|391694800|gb|EIT27429.1| peptide chain release factor 1 [Yersinia pestis PY-95]
 gi|391698233|gb|EIT30558.1| peptide chain release factor 1 [Yersinia pestis PY-96]
 gi|391699509|gb|EIT31696.1| peptide chain release factor 1 [Yersinia pestis PY-98]
 gi|391709435|gb|EIT40614.1| peptide chain release factor 1 [Yersinia pestis PY-99]
 gi|391715585|gb|EIT46111.1| peptide chain release factor 1 [Yersinia pestis PY-100]
 gi|391716294|gb|EIT46756.1| peptide chain release factor 1 [Yersinia pestis PY-101]
 gi|391726709|gb|EIT56024.1| peptide chain release factor 1 [Yersinia pestis PY-102]
 gi|391729970|gb|EIT58898.1| peptide chain release factor 1 [Yersinia pestis PY-103]
 gi|391735058|gb|EIT63254.1| peptide chain release factor 1 [Yersinia pestis PY-113]
 gi|411176407|gb|EKS46427.1| peptide chain release factor 1 [Yersinia pestis INS]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 218/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
             E R+ Q +I+  + ++    +D +M +MA EEL +A    + L+  L   LLPKD  D
Sbjct: 52  FKEWRSAQDDIEAAEMML----DDLEMREMAQEELKIAKARSEELEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ERDC LE+RAGTGG+EA++FA D+F+MY RY++ + WK E++  +E +  GYKE  A IS
Sbjct: 108 ERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAETRRWKVEIMSASEGEHGGYKEIIAKIS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTY 182
           G GV+G+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E ++   N  DLRIDT+
Sbjct: 168 GDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAELPEINAGDLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH NKAKA+ VL A++   E  +  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           L+ +  R   +G+GDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I  ++ 
Sbjct: 288 LAEASERRNLLGTGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIQPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +++ 
Sbjct: 347 EYQADQLSAL 356


>gi|148378145|ref|YP_001252686.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|153932228|ref|YP_001382546.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|153936703|ref|YP_001386098.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
 gi|166223548|sp|A7FQG2.1|RF1_CLOB1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|166223549|sp|A5HY35.1|RF1_CLOBH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|148287629|emb|CAL81694.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           3502]
 gi|152928272|gb|ABS33772.1| peptide chain release factor 1 [Clostridium botulinum A str. ATCC
           19397]
 gi|152932617|gb|ABS38116.1| peptide chain release factor 1 [Clostridium botulinum A str. Hall]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/311 (46%), Positives = 222/311 (71%), Gaps = 8/311 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEE---LCLAIDEEKRLQSLLLKSLLPKDDA 62
           E +  Q++++  K ++ E S DK++ +MA EE   L L +++ +R  ++LL   LPKD  
Sbjct: 50  EYKKAQEDLESDKEMLKEES-DKELREMAQEEIKELTLKLEDLERELTILL---LPKDPN 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D++D  +E+RAG GGEEA+LFA ++ +MY RY+++K WK E + +  +D+ G+KE + A+
Sbjct: 106 DDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETISLNATDIGGFKEVTVAV 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+ D+VD+ +   DLRID Y
Sbjct: 166 KGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVY 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G GGQ  NTT+SAVR+TH+PTG+ ++ QDE+SQ  NK KA+KVL A+L+E   +   
Sbjct: 226 RASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERA 285

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            S ++ R  Q+G+GDRSERIRTYN+PQGR+TDHR+G+T + +   ++G ++D  I+AL+ 
Sbjct: 286 ASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDG-DIDEAIEALVT 344

Query: 303 QQEMDAIASFG 313
           + + + +   G
Sbjct: 345 EDQAEKMKDLG 355


>gi|398969075|ref|ZP_10682688.1| peptide chain release factor 1 [Pseudomonas sp. GM30]
 gi|398142769|gb|EJM31660.1| peptide chain release factor 1 [Pseudomonas sp. GM30]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/304 (49%), Positives = 215/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A +   RL+  L + LLPKD  D R+  LE
Sbjct: 59  QSDLEGAQALLKDS--DPDMREMAVEEVREAKELLIRLEDDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A I G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH NTT+SA+R+THIPTG  +  Q+ERSQH N+A+A+  L AKL + + +    + +  R
Sbjct: 237 QHVNTTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLSAKLNDQQTAAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVEAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|427399863|ref|ZP_18891101.1| peptide chain release factor 1 [Massilia timonae CCUG 45783]
 gi|425721140|gb|EKU84054.1| peptide chain release factor 1 [Massilia timonae CCUG 45783]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 203/292 (69%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  +D DM D A EE+  A +    L+  L K LLPKD  DER+  LE+RAGTGG+E++L
Sbjct: 67  ELLQDPDMKDFAQEEIEAAKERMAGLELELQKMLLPKDANDERNIFLEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R++++  W+ E+V  + SDL GY+E    + G G Y KLKFESG HRVQR
Sbjct: 127 FAGDLLRMYTRFAERNRWQVEMVSESPSDLGGYREVIVRVVGHGAYSKLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADEV DV +   DLRIDTYR+ G+GGQH N T+SAVR+
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEVEDVDINPADLRIDTYRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NKA A+KVL A+L + +        +  R   IGSGDRSER
Sbjct: 247 THLPTGLVVECQDDRSQHKNKASAMKVLAARLKDAQLREQQSKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +L    DAL  + + + +A+ G
Sbjct: 307 IRTYNFPQGRLTDHRINLTLYKLDFIMDG-DLKELTDALAQEHQAELLAALG 357


>gi|254438684|ref|ZP_05052178.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
 gi|198254130|gb|EDY78444.1| peptide chain release factor 1 [Octadecabacter antarcticus 307]
          Length = 344

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 142/302 (47%), Positives = 220/302 (72%), Gaps = 6/302 (1%)

Query: 12  KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           +EI+G ++++     D +M ++A  EL    +     ++ +  +L+PKD AD +  +LE+
Sbjct: 48  EEIEGAQAML----SDPEMKELAEMELPQLRERLPDAEAAVKLALIPKDAADGKPALLEI 103

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           R GTGG+EA+LFA D+ +MY+RY++ +GW FE++  ++S+L G KE +A I+G  V+ ++
Sbjct: 104 RPGTGGDEAALFAGDLLRMYQRYAESRGWTFEILEESQSELGGIKEVTARIAGNNVFARM 163

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           K+ESG+HRVQRVP TE  GR+HTSA +VA+LP+A++VD+++   D+RIDT R+ GSGGQH
Sbjct: 164 KYESGVHRVQRVPETESGGRIHTSAATVAVLPEAEDVDIQINANDIRIDTMRASGSGGQH 223

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT+SAVR+TH+P+G+ ++   E+SQH N+  A++VL  +LY+ ER ++H  RS  R+ 
Sbjct: 224 VNTTDSAVRITHMPSGIVVT-SSEKSQHRNREIAMQVLKTRLYDAERQKVHDERSADRAA 282

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
           Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + +  +++G +LD  ID L+   +  A+A 
Sbjct: 283 QVGSGDRSERIRTYNFPQGRMTDHRINLTLYKLDAILQG-DLDEVIDGLIQDAQASALAE 341

Query: 312 FG 313
            G
Sbjct: 342 MG 343


>gi|422110879|ref|ZP_16380738.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309378429|emb|CBX22924.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKHEAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|421540940|ref|ZP_15987076.1| peptide chain release factor 1 [Neisseria meningitidis 93004]
 gi|433469811|ref|ZP_20427221.1| peptide chain release factor 1 [Neisseria meningitidis 98080]
 gi|402316805|gb|EJU52345.1| peptide chain release factor 1 [Neisseria meningitidis 93004]
 gi|432201880|gb|ELK57953.1| peptide chain release factor 1 [Neisseria meningitidis 98080]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +E+RAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|259503694|ref|ZP_05746596.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
 gi|259168326|gb|EEW52821.1| peptide chain release factor RF1 [Lactobacillus antri DSM 16041]
          Length = 362

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 136/278 (48%), Positives = 207/278 (74%), Gaps = 1/278 (0%)

Query: 25  SEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           ++D D+  M  +EL  + + +++L+  L   L+PKD  D+++ I+E+R   GG+EASLFA
Sbjct: 73  TDDPDLAAMTKDELAESKERQEQLEKELEVLLIPKDPNDDKNIIMEIRGAAGGDEASLFA 132

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D++ MY  Y++K+GWK EVV  +E+++ G+KE +  I+G  VY KLKFE+G HRVQRVP
Sbjct: 133 ADLYNMYLHYAEKQGWKVEVVDKSETEVGGFKEIALMITGTNVYSKLKFENGAHRVQRVP 192

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           +TE +GRVHTS  +V ++P+A++VDV +  +D+R+D YRS G+GGQH N T+SAVR+TH+
Sbjct: 193 VTESAGRVHTSTATVGVMPEAEDVDVDIDPKDIRVDVYRSSGAGGQHVNKTSSAVRMTHL 252

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +++QDERSQ  N+AKA+++L +++Y+  + +   +  K R   IG+GDRSERIRT
Sbjct: 253 PTGIVVAMQDERSQQQNRAKAMRILKSRVYDYYQQKEQNAYDKKRKNAIGTGDRSERIRT 312

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           YN+PQ RVTDHR+G+T + +  +M GE LD  I+AL++
Sbjct: 313 YNYPQNRVTDHRIGLTLNKLDKIMSGE-LDEIIEALIV 349


>gi|241760302|ref|ZP_04758397.1| peptide chain release factor 1 [Neisseria flavescens SK114]
 gi|241319180|gb|EER55658.1| peptide chain release factor 1 [Neisseria flavescens SK114]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATENQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +L+   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DLEEITNALIAEHQAELLAAMG 357


>gi|261340150|ref|ZP_05968008.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
 gi|288317665|gb|EFC56603.1| peptide chain release factor 1 [Enterobacter cancerogenus ATCC
           35316]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/309 (48%), Positives = 216/309 (69%), Gaps = 6/309 (1%)

Query: 5   SELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADE 64
           ++ R  Q +I+  + ++    +D +M +MA EEL  A    + ++  L   LLPKD  DE
Sbjct: 53  TDWRQVQDDIETAQMML----DDPEMREMAQEELQDAKARSEEMEQQLQVLLLPKDPDDE 108

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
           R+  +EVRAGTGG+EA+LFA D+F+MY RY++ + W+ E++   E +  G+KE  A ISG
Sbjct: 109 RNAFVEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEILSANEGEHGGFKEVIAKISG 168

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYR 183
            GVYG+LKFESG HRVQRVP TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+R
Sbjct: 169 DGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFR 228

Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
           S G+GGQH NTT+SA+R+TH+PTG+ +  QDERSQH NKAKAL VL A++   E ++   
Sbjct: 229 SSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIRAAEVAKRQQ 288

Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           + +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ +
Sbjct: 289 AEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQE 347

Query: 304 QEMDAIASF 312
            + D +A+ 
Sbjct: 348 YQADQLAAL 356


>gi|293398675|ref|ZP_06642853.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
 gi|291611146|gb|EFF40243.1| peptide chain release factor 1 [Neisseria gonorrhoeae F62]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +E+RAGTGG EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGGEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++  +    +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|146311983|ref|YP_001177057.1| peptide chain release factor 1 [Enterobacter sp. 638]
 gi|166977363|sp|A4WBC6.1|RF1_ENT38 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145318859|gb|ABP61006.1| bacterial peptide chain release factor 1 (bRF-1) [Enterobacter sp.
           638]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 206/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A    + ++  L   LLPKD  DER+  +EVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELQEAKARAEEMEQQLQVLLLPKDPDDERNAFVEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++   E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSANEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++   N  DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPEVPEAELPDINPGDLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++   E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGSRIRAAEIAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YNFPQGRVTDHR+ +T + + ++MEG+ LD  I+ ++ + + D +A+  
Sbjct: 310 YNFPQGRVTDHRINLTIYRLDEIMEGK-LDSLIEPIVQEYQADQLAALA 357


>gi|161503112|ref|YP_001570224.1| peptide chain release factor 1 [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:- str. RSK2980]
 gi|189039988|sp|A9MPA1.1|RF1_SALAR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|160864459|gb|ABX21082.1| hypothetical protein SARI_01177 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGEGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 356


>gi|221201722|ref|ZP_03574760.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
 gi|221207203|ref|ZP_03580213.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221213331|ref|ZP_03586306.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|421471767|ref|ZP_15920023.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           BAA-247]
 gi|421476378|ref|ZP_15924266.1| peptide chain release factor 1 [Burkholderia multivorans CF2]
 gi|221166783|gb|EED99254.1| peptide chain release factor 1 [Burkholderia multivorans CGD1]
 gi|221172791|gb|EEE05228.1| peptide chain release factor 1 [Burkholderia multivorans CGD2]
 gi|221178538|gb|EEE10947.1| peptide chain release factor 1 [Burkholderia multivorans CGD2M]
 gi|400224691|gb|EJO54908.1| peptide chain release factor 1 [Burkholderia multivorans ATCC
           BAA-247]
 gi|400228454|gb|EJO58388.1| peptide chain release factor 1 [Burkholderia multivorans CF2]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  A +   RL+  L K LLPKD  D+R+  +E+RAGTGG+E++L
Sbjct: 67  ELLADPSMRDFAEEEIRSARERMARLEVELQKMLLPKDPNDDRNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY R+++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRFAERQRWQVEMMSESPSDLGGYKEVIVRIAGQGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYRLEAIMDG-DLDELIGALVSEHQAELLASLG 357


>gi|168177471|ref|ZP_02612135.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226947362|ref|YP_002802453.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
 gi|254790873|sp|C1FQ97.1|RF1_CLOBJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|182670538|gb|EDT82512.1| peptide chain release factor 1 [Clostridium botulinum NCTC 2916]
 gi|226843349|gb|ACO86015.1| peptide chain release factor 1 [Clostridium botulinum A2 str.
           Kyoto]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 222/311 (71%), Gaps = 8/311 (2%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEE---LCLAIDEEKRLQSLLLKSLLPKDDA 62
           E +  Q++++  K ++ E S DK++ +MA EE   L L +++ +R  ++LL   LPKD  
Sbjct: 50  EYKKAQEDLESDKEMLKEES-DKELREMAQEEIKELTLRLEDLERELTILL---LPKDPN 105

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D++D  +E+RAG GGEEA+LFA ++ +MY RY+++K WK E + +  +D+ G+KE + AI
Sbjct: 106 DDKDVFIEIRAGAGGEEAALFASNLLRMYTRYAERKNWKVETMSLNATDIGGFKEVTVAI 165

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
            G G Y +LK+ESG+HRVQRVP TE SGR+HTS  +VA+LP+ D+VD+ +   DLRID Y
Sbjct: 166 KGKGAYSRLKYESGVHRVQRVPDTESSGRIHTSTATVAVLPEVDDVDININANDLRIDVY 225

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G GGQ  NTT+SAVR+TH+PTG+ ++ QDE+SQ  NK KA+KVL A+L+E   +   
Sbjct: 226 RASGHGGQCVNTTDSAVRITHLPTGLVVTCQDEKSQLKNKEKAMKVLKARLFEAAEAERA 285

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
            S ++ R  Q+G+GDRSERIRTYN+PQGR+TDHR+G+T + +   ++G ++D  I+AL+ 
Sbjct: 286 ASIAEDRKSQVGTGDRSERIRTYNYPQGRITDHRIGLTLYKLETFLDG-DIDEVIEALVT 344

Query: 303 QQEMDAIASFG 313
           + + + +   G
Sbjct: 345 EDQAEKMKDLG 355


>gi|407794321|ref|ZP_11141348.1| protein chain release factor A [Idiomarina xiamenensis 10-D-4]
 gi|407212921|gb|EKE82782.1| protein chain release factor A [Idiomarina xiamenensis 10-D-4]
          Length = 362

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/311 (45%), Positives = 216/311 (69%), Gaps = 4/311 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
            S  +  Q+++     ++ E  +D +M  MA +EL  A  ++++L   L   LLP+D  D
Sbjct: 52  FSRYQQAQEDVQTAAEMLQE--DDAEMRAMAEDELSQAKQQQEQLTQSLQVLLLPRDPND 109

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           +R C +E+RAG GG+EA++FA D+F+MY RY++++GWK  +V  ++ +  GYKE  A +S
Sbjct: 110 DRSCYVEIRAGAGGDEAAIFAGDLFRMYSRYAEQRGWKVSMVSASDGEHGGYKEVIAHVS 169

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTY 182
           G G YG++KFESG HRVQRVP TE  GR+HTSA +VA+LP+  E + + +   DLR+DTY
Sbjct: 170 GEGCYGRMKFESGGHRVQRVPETESQGRIHTSACTVAVLPEIPEAEAIEINPADLRVDTY 229

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           R+ G+GGQH N T+SA+R+THIPTG+ +  QDERSQH N+AKA+ VL A+L ++E  +  
Sbjct: 230 RASGAGGQHVNRTDSAIRLTHIPTGVVVECQDERSQHKNRAKAMSVLQARLQKLEDDKRQ 289

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
              +  R   +GSGDRSERIRTYN+PQ RVTDHR+ +T + + +++ G +LD+ +DA++ 
Sbjct: 290 QEEASTRRNLVGSGDRSERIRTYNYPQSRVTDHRINLTLYRLDEVLAG-SLDLLLDAIVQ 348

Query: 303 QQEMDAIASFG 313
           + + D +A+  
Sbjct: 349 EHQADQLAALA 359


>gi|261378877|ref|ZP_05983450.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
 gi|269144693|gb|EEZ71111.1| peptide chain release factor 1 [Neisseria cinerea ATCC 14685]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +L+   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DLEEITNALIAEHQAELLAAMG 357


>gi|117621299|ref|YP_857649.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|166223525|sp|A0KMZ8.1|RF1_AERHH RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|117562706|gb|ABK39654.1| peptide chain release factor 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 362

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/316 (45%), Positives = 214/316 (67%), Gaps = 4/316 (1%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +H   + R  ++ +D  + ++ E  +D D+ +MA EEL LA    +  +  L   LLP+D
Sbjct: 49  VHAFQQFRQAEENLDATRQMLEE--DDADLREMAQEELPLAKATFEEQEQALQVMLLPRD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+ +C LE+RAG GG+EA++FA D+F+MY RY++++GW+  +V   + +  GYKE  A
Sbjct: 107 PKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRVSIVSCNDGEHGGYKEVIA 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRI 179
            + G  VYG+LKFESG HRVQRVP TE  GRVHTSA +VA+LP+  E + + +   +L+I
Sbjct: 167 KVEGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINPSELKI 226

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT+R+ G+GGQH N T+SA+R+TH+PTG+ +  QDERSQH N+AKA+ VL A+L   E  
Sbjct: 227 DTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDE 286

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R   +    R   +GSGDRSERIRTYN+PQGR+++HR+ +T + + ++MEG +LD  I  
Sbjct: 287 RHRAAEQSTRRNLVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLGEIMEG-DLDCVISP 345

Query: 300 LLLQQEMDAIASFGST 315
           ++ + + D +AS   +
Sbjct: 346 MIQEYQADQLASLAES 361


>gi|145588324|ref|YP_001154921.1| peptide chain release factor 1 [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189039983|sp|A4SV43.1|RF1_POLSQ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|145046730|gb|ABP33357.1| bacterial peptide chain release factor 1 (bRF-1) [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 359

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/291 (50%), Positives = 206/291 (70%), Gaps = 2/291 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M D A EE   A    + L+  L K LLPKD  DER+  LE+RAGTGG+E++LFA 
Sbjct: 70  KDPEMKDFADEEQKQAQATMEELEGALQKLLLPKDVNDERNVFLEIRAGTGGDESALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY R+++++GWK EVV   ESDL GYKE    + G  VY +LKFESG HRVQRVP 
Sbjct: 130 DLLRMYTRFAERQGWKVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESGGHRVQRVPQ 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADE++ V++   +LRIDT+R+ G+GGQH N T+SAVR+THI
Sbjct: 190 TETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QD+RSQH N+ +A+KVL +++ +      H   ++ R   IGSGDRS+RIRT
Sbjct: 250 PTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLIGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           YNFPQGR+TDHR+ +T + I  MM+G ++D   +AL  + + + +A+ G +
Sbjct: 310 YNFPQGRITDHRINLTLYKIDAMMDG-DIDDLCNALASEHQAELLAALGDS 359


>gi|28868324|ref|NP_790943.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|32171519|sp|Q888C1.1|RF1_PSESM RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|28851561|gb|AAO54638.1| peptide chain release factor 1 [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 217/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  +L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYKQLARVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPKTESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ASAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|385338525|ref|YP_005892398.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
           2594]
 gi|433476134|ref|ZP_20433470.1| peptide chain release factor 1 [Neisseria meningitidis 88050]
 gi|433480334|ref|ZP_20437618.1| peptide chain release factor 1 [Neisseria meningitidis 63041]
 gi|433514035|ref|ZP_20470821.1| peptide chain release factor 1 [Neisseria meningitidis 63049]
 gi|433516289|ref|ZP_20473053.1| peptide chain release factor 1 [Neisseria meningitidis 2004090]
 gi|433518111|ref|ZP_20474852.1| peptide chain release factor 1 [Neisseria meningitidis 96023]
 gi|433520399|ref|ZP_20477113.1| peptide chain release factor 1 [Neisseria meningitidis 65014]
 gi|433524644|ref|ZP_20481301.1| peptide chain release factor 1 [Neisseria meningitidis 97020]
 gi|433528987|ref|ZP_20485594.1| peptide chain release factor 1 [Neisseria meningitidis NM3652]
 gi|433530993|ref|ZP_20487576.1| peptide chain release factor 1 [Neisseria meningitidis NM3642]
 gi|433533260|ref|ZP_20489818.1| peptide chain release factor 1 [Neisseria meningitidis 2007056]
 gi|433535111|ref|ZP_20491646.1| peptide chain release factor 1 [Neisseria meningitidis 2001212]
 gi|433541572|ref|ZP_20498018.1| peptide chain release factor 1 [Neisseria meningitidis 63006]
 gi|319410939|emb|CBY91334.1| peptide chain release factor I (RF-1) [Neisseria meningitidis WUE
           2594]
 gi|432208650|gb|ELK64626.1| peptide chain release factor 1 [Neisseria meningitidis 88050]
 gi|432214510|gb|ELK70410.1| peptide chain release factor 1 [Neisseria meningitidis 63041]
 gi|432246197|gb|ELL01653.1| peptide chain release factor 1 [Neisseria meningitidis 63049]
 gi|432251575|gb|ELL06939.1| peptide chain release factor 1 [Neisseria meningitidis 2004090]
 gi|432252241|gb|ELL07598.1| peptide chain release factor 1 [Neisseria meningitidis 96023]
 gi|432252696|gb|ELL08047.1| peptide chain release factor 1 [Neisseria meningitidis 65014]
 gi|432258330|gb|ELL13616.1| peptide chain release factor 1 [Neisseria meningitidis 97020]
 gi|432264091|gb|ELL19301.1| peptide chain release factor 1 [Neisseria meningitidis NM3652]
 gi|432264804|gb|ELL20001.1| peptide chain release factor 1 [Neisseria meningitidis NM3642]
 gi|432265388|gb|ELL20583.1| peptide chain release factor 1 [Neisseria meningitidis 2007056]
 gi|432270305|gb|ELL25445.1| peptide chain release factor 1 [Neisseria meningitidis 2001212]
 gi|432276404|gb|ELL31461.1| peptide chain release factor 1 [Neisseria meningitidis 63006]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|385323702|ref|YP_005878141.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
 gi|261392089|emb|CAX49586.1| peptide chain release factor I (RF-1) [Neisseria meningitidis 8013]
          Length = 358

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|167855820|ref|ZP_02478572.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219871001|ref|YP_002475376.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
 gi|254790883|sp|B8F526.1|RF1_HAEPS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|167853033|gb|EDS24295.1| peptide chain release factor 1 [Haemophilus parasuis 29755]
 gi|219691205|gb|ACL32428.1| peptide chain release factor 1 [Haemophilus parasuis SH0165]
          Length = 360

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 146/288 (50%), Positives = 206/288 (71%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D DM ++A EE+     E ++L+  L   LLPKD  DE +C LE+RAGTGG+EA +FA 
Sbjct: 70  DDPDMKEIAAEEIEANKAEIEQLEQNLQILLLPKDPNDEYNCFLEIRAGTGGDEAGIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+++MY RY++ K W+ E +   ES+  GYKE    ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLYRMYSRYAESKRWRIEELSANESEQGGYKEIIVKISGEGVYGQLKFESGGHRVQRVPK 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+THI
Sbjct: 190 TESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHI 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL +++ ++E+ +    ++  R   +GSGDRS++IRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLASRIVQVEKEKQAQEQADTRRNLLGSGDRSDKIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 YNYPQGRVTDHRINLTVYRLDEVMNGK-IDELIQPIITEYQADQLAAL 356


>gi|188587462|ref|YP_001919007.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|229470350|sp|B2A3J0.1|RF1_NATTJ RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|179352149|gb|ACB86419.1| peptide chain release factor 1 (bRF-1) [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 357

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/308 (47%), Positives = 210/308 (68%), Gaps = 2/308 (0%)

Query: 7   LRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERD 66
           L TKQ E +  K ++ E  ED DM +   +E+    ++ + +   L   LLPKD  DE++
Sbjct: 52  LETKQ-EFEEAKEMLEENDEDPDMEEFLKDEIPRLENQMQEIYDSLKILLLPKDPNDEKN 110

Query: 67  CILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVG 126
            I+E+RAG GG+EA+LFA D+++MY RY++   WK E++   E D+ G+KE    I G  
Sbjct: 111 VIVEIRAGAGGDEAALFAADLYRMYTRYAEIMNWKTEIMDSHEKDMGGFKEIVFMIEGKN 170

Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
            Y +LKFESG+HRVQRVP TE SGR+HTS  +VA+LP+A++V++ +   +LRIDT+ + G
Sbjct: 171 AYSRLKFESGVHRVQRVPSTESSGRIHTSTATVAVLPEAEDVEIEIDTNELRIDTFCATG 230

Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRS 246
            GGQ  NTT SAVR+TH PTG+ +S QDE+SQH N+ KA+KVL A++Y+M         +
Sbjct: 231 PGGQSVNTTQSAVRITHEPTGVVVSCQDEKSQHKNRDKAMKVLRARIYDMYLEEQQQQEA 290

Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEM 306
           + R  Q+GSGDRSERIRTYNFPQGR+TDHR+  T H +  ++EGE +D  IDAL+  ++ 
Sbjct: 291 EERKSQVGSGDRSERIRTYNFPQGRITDHRINFTTHRLEQVLEGE-IDELIDALITTEQA 349

Query: 307 DAIASFGS 314
           + +   G+
Sbjct: 350 EQLKKMGA 357


>gi|385207918|ref|ZP_10034786.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
 gi|385180256|gb|EIF29532.1| peptide chain release factor 1 [Burkholderia sp. Ch1-1]
          Length = 356

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 205/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A EE+  A +   +L + L K LLPKD  D+R+  LE+RAGTGG+E++L
Sbjct: 63  ELLADASMRDFAEEEIRAARERMDKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESAL 122

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E++  +ESDL GYKE    I+G   Y KLKFESG HRVQR
Sbjct: 123 FAGDLLRMYLRYAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQR 182

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 183 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 242

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTG+ +  QD+RSQH NK +ALKVL A++ + +        +  R   IGSGDRSER
Sbjct: 243 THLPTGIVVECQDDRSQHKNKDRALKVLAARIKDKQSHEQQAKEAATRKSLIGSGDRSER 302

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G
Sbjct: 303 IRTYNFPQGRLTDHRINLTLYRLDAIMDG-DLDELIAALVSEHQAELLASLG 353


>gi|255037851|ref|YP_003088472.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
 gi|254950607|gb|ACT95307.1| peptide chain release factor 1 [Dyadobacter fermentans DSM 18053]
          Length = 357

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/286 (51%), Positives = 207/286 (72%), Gaps = 1/286 (0%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           QK+I G K LI    +D+D+ +MA EEL   + + + L+  + + L+PKD  D R+ ILE
Sbjct: 55  QKDIAGTKELI-ATEKDEDLREMAKEELDDLLPKLEELEQNIKELLIPKDPNDSRNIILE 113

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +R GTGG+EA++FA D+F+MY+R+ +K GW+  V+  TE    GYKE    + G  VYGK
Sbjct: 114 IRGGTGGDEAAIFAGDLFRMYQRFIEKMGWRSSVMDYTEGTNGGYKEIICKVEGEDVYGK 173

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQ 190
           +KFESG+HRVQRVP TE  GR+HTSA SVA+LP+A+EVDV++   D+RIDT++S G+GGQ
Sbjct: 174 MKFESGVHRVQRVPATESQGRIHTSAASVAVLPEAEEVDVQINMNDVRIDTFQSSGAGGQ 233

Query: 191 HANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRS 250
             NTT SAVR+THIP+G+ +S QDERSQ  NK +AL VL ++LYE+E  + + + S  R 
Sbjct: 234 SVNTTYSAVRLTHIPSGLVVSCQDERSQLKNKDRALSVLRSRLYEIELKKHNDAISSQRK 293

Query: 251 EQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
             +GSGDRS++IRTYN+PQ R+TDHR+G T + +  +MEG+  D+ 
Sbjct: 294 SMVGSGDRSDKIRTYNYPQSRITDHRIGYTVYNLPAVMEGDIADLI 339


>gi|437501133|ref|ZP_20774264.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648898 4-5]
 gi|435238863|gb|ELO19477.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. 648898 4-5]
          Length = 294

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 4   DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 63

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 64  DLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 123

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 124 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 183

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 184 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRT 243

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 244 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 290


>gi|410465614|ref|ZP_11318843.1| peptide chain release factor 1 [Desulfovibrio magneticus str.
           Maddingley MBC34]
 gi|409981343|gb|EKO37925.1| peptide chain release factor 1 [Desulfovibrio magneticus str.
           Maddingley MBC34]
          Length = 357

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 148/283 (52%), Positives = 206/283 (72%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ ++A  E     + +  L++ L   LLPKD  DE++ +LE+RAGTGG+EA+LFA D
Sbjct: 69  DPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGDEAALFAGD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ K WK E++  +E+   G+KE  A+ISG  VY +LK+ESG HRVQRVP T
Sbjct: 129 LFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSAV+VAI+P+A+EVDV +   +LRID YRS G GGQ  NTT+SAVRVTHIP+
Sbjct: 189 ESQGRIHTSAVTVAIMPEAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTDSAVRVTHIPS 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH NKAKALKVL ++L ++E+ +    +   R  Q+G+GDRSERIRTYN
Sbjct: 249 GLVVICQDEKSQHKNKAKALKVLRSRLLQIEQDKQRAEQEAARRSQVGTGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQGRVTDHR+ +T + +  ++EG +LD    AL+   + +A+
Sbjct: 309 FPQGRVTDHRINLTLYRLDAVLEG-DLDELCGALIGHYQAEAL 350


>gi|242280071|ref|YP_002992200.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
 gi|259585219|sp|C6BYQ4.1|RF1_DESAD RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|242122965|gb|ACS80661.1| peptide chain release factor 1 [Desulfovibrio salexigens DSM 2638]
          Length = 357

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/283 (51%), Positives = 208/283 (73%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ +MA  E+    D   +L+  L   LLPKD  D ++ ILE+RAGTGGEEA+LFA D
Sbjct: 69  DPEIREMAEMEIAEIKDRLPKLEEELKLLLLPKDPMDGKNIILEIRAGTGGEEAALFAAD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY R+++  GWK EV+    +   G+KE  AAISG  +Y  +K+ESG HRVQRVP T
Sbjct: 129 LFRMYSRFAESNGWKVEVMNSNPTGTGGFKEIIAAISGSRIYSMMKYESGTHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSA +VAI+P+A+EVDV++RNEDLRID +R+ G GGQ  NTT+SA+R+TH+PT
Sbjct: 189 ETQGRIHTSAATVAIMPEAEEVDVQVRNEDLRIDVFRASGPGGQSVNTTDSAIRITHLPT 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH NKAKA+KVLC++L + E+ + H   ++ R  Q+GSGDRSERIRTYN
Sbjct: 249 GLVVICQDEKSQHKNKAKAMKVLCSRLLQAEQDKQHAEMAEQRRAQVGSGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQGRVTDHR+ +T + +  ++EG ++   +++L+   + +A+
Sbjct: 309 FPQGRVTDHRINLTLYKLDAVIEG-DMQELVESLISHYQSEAL 350


>gi|398860967|ref|ZP_10616608.1| peptide chain release factor 1 [Pseudomonas sp. GM79]
 gi|398233986|gb|EJN19882.1| peptide chain release factor 1 [Pseudomonas sp. GM79]
          Length = 360

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 216/304 (71%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   +++ L + LLPKD  D R+  LE
Sbjct: 59  QGDLEGAQALLKDS--DPDMREMAVEEVREAKEQLIEIEAQLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGENVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLRIDTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|313667936|ref|YP_004048220.1| peptide chain release factor I [Neisseria lactamica 020-06]
 gi|313005398|emb|CBN86832.1| peptide chain release factor I [Neisseria lactamica 020-06]
          Length = 358

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDALDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|421538690|ref|ZP_15984865.1| peptide chain release factor 1 [Neisseria meningitidis 93003]
 gi|402316360|gb|EJU51909.1| peptide chain release factor 1 [Neisseria meningitidis 93003]
          Length = 358

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 152/292 (52%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIIGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|386815312|ref|ZP_10102530.1| bacterial peptide chain release factor 1 (bRF-1) [Thiothrix nivea
           DSM 5205]
 gi|386419888|gb|EIJ33723.1| bacterial peptide chain release factor 1 (bRF-1) [Thiothrix nivea
           DSM 5205]
          Length = 359

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/288 (49%), Positives = 202/288 (70%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M +MA EEL  A      L++ L K LLPKD  D  +  LE+RAGTGG+EA++FA D
Sbjct: 71  DPEMREMAEEELDTAKTRRAELETDLQKLLLPKDPHDNSNVFLEIRAGTGGDEAAIFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + W+ E++   E +  GYKE    + G G Y +LKFESG HRVQRVP T
Sbjct: 131 LFRMYSRYTEMRRWQIEIISQNEGEHGGYKEIITRVIGQGAYSRLKFESGAHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ DEV+   +   DL+IDTYR+ G+GGQH N T SA+R+TH+P
Sbjct: 191 ESQGRIHTSAATVAVMPEVDEVEATDINPADLKIDTYRASGAGGQHINKTESAIRITHLP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH N+AKA+ +L A+++E ER +    +++ R   +GSGDRSERIRTY
Sbjct: 251 TGIVVECQDERSQHKNRAKAMGLLQARIFEGERQKQAAEQAETRKSLVGSGDRSERIRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGRVTDHR+ +T + + ++M G N+D  I+ L+ + + D +A+  
Sbjct: 311 NFPQGRVTDHRINLTLYKLDEIMAG-NVDQVIEPLINEYQADQLAALA 357


>gi|238751561|ref|ZP_04613052.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
 gi|238710279|gb|EEQ02506.1| Peptide chain release factor 1 [Yersinia rohdei ATCC 43380]
          Length = 360

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
             E R+ Q +++  + ++    ED +M +MA EEL  A    + L+  L   LLPKD  D
Sbjct: 52  FKEWRSVQDDLEAAEMML----EDLEMREMAQEELKEAKARSEELEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ERDC LE+RAGTGG+EA++FA D+F+MY RY++ + WK E++  +E +  GYKE  A +S
Sbjct: 108 ERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAESRRWKVEIMSASEGEHGGYKEVIAKVS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTY 182
           G GV+G+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E ++   N  DLRIDT+
Sbjct: 168 GEGVFGRLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH NKAKA+ VL A++   E  +  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           L+ +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I  ++ 
Sbjct: 288 LAEASERRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIQPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +++ 
Sbjct: 347 EYQADQLSAL 356


>gi|237731780|ref|ZP_04562261.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
 gi|395229702|ref|ZP_10408013.1| peptide chain release factor 1 [Citrobacter sp. A1]
 gi|421847446|ref|ZP_16280584.1| peptide chain release factor 1 [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
 gi|424729808|ref|ZP_18158408.1| glutamyl-trna reductase [Citrobacter sp. L17]
 gi|226907319|gb|EEH93237.1| peptide chain release factor 1 [Citrobacter sp. 30_2]
 gi|394716917|gb|EJF22647.1| peptide chain release factor 1 [Citrobacter sp. A1]
 gi|411771242|gb|EKS54949.1| peptide chain release factor 1 [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
 gi|422895763|gb|EKU35550.1| glutamyl-trna reductase [Citrobacter sp. L17]
 gi|455645768|gb|EMF24811.1| peptide chain release factor 1 [Citrobacter freundii GTC 09479]
          Length = 360

 Score =  305 bits (780), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 210/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA +EL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQDELREAKEKCEQLEQHLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++  +E +  G+KE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSASEGEHGGFKEVIAKISGEGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  + ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPDAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++   E +R   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASERRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQEYQADQLAAL 356


>gi|381404795|ref|ZP_09929479.1| peptide chain release factor 1 [Pantoea sp. Sc1]
 gi|380737994|gb|EIB99057.1| peptide chain release factor 1 [Pantoea sp. Sc1]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/288 (51%), Positives = 210/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M DMA EEL  A ++ + L+  L   LLPKD  DER C +EVRAGTGG+EA++FA 
Sbjct: 70  DDPEMRDMAQEELQAAREKGETLEQQLQVLLLPKDPDDERACFVEVRAGTGGDEAAIFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E+V   + +  GYKE  A ++G G YG++KFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEGRRWRVEIVSANDGEHGGYKEVIARVTGEGAYGRMKFESGGHRVQRVPE 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++   N  DL+IDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPEIPEAELPEINAGDLKIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E +R H + +  R   +GSGDRS+RIRT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALAVLGARIHAAEMARRHAAEASTRRNLLGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + ++MEG+ +D  I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTIYRLDEVMEGK-IDSLIEPIVQEYQADQLAAL 356


>gi|239907764|ref|YP_002954505.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
 gi|259585220|sp|C4XIQ1.1|RF1_DESMR RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|239797630|dbj|BAH76619.1| peptide chain release factor 1 [Desulfovibrio magneticus RS-1]
          Length = 357

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/283 (52%), Positives = 206/283 (72%), Gaps = 1/283 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ ++A  E     + +  L++ L   LLPKD  DE++ +LE+RAGTGG+EA+LFA D
Sbjct: 69  DPEIRELAQAETKALKEAQVELEARLKVLLLPKDPMDEKNILLEIRAGTGGDEAALFAGD 128

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ K WK E++  +E+   G+KE  A+ISG  VY +LK+ESG HRVQRVP T
Sbjct: 129 LFRMYTRYAETKRWKVEIMSQSETGSGGFKEVIASISGDKVYSRLKYESGAHRVQRVPAT 188

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTSAV+VAI+P+A+EVDV +   +LRID YRS G GGQ  NTT+SAVRVTHIP+
Sbjct: 189 ESQGRIHTSAVTVAIMPEAEEVDVAIDPNELRIDVYRSSGPGGQSVNTTDSAVRVTHIPS 248

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +  QDE+SQH NKAKALKVL ++L ++E+ +    +   R  Q+G+GDRSERIRTYN
Sbjct: 249 GLVVICQDEKSQHKNKAKALKVLRSRLLQVEQDKQRAEQEAARRSQVGTGDRSERIRTYN 308

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
           FPQGRVTDHR+ +T + +  ++EG +LD    AL+   + +A+
Sbjct: 309 FPQGRVTDHRINLTLYRLDAVLEG-DLDELCGALIGHYQAEAL 350


>gi|319776412|ref|YP_004138900.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|329123576|ref|ZP_08252138.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
 gi|317451003|emb|CBY87233.1| peptide chain release factor RF-1 [Haemophilus influenzae F3047]
 gi|327470318|gb|EGF15778.1| peptide chain release factor RF1 [Haemophilus aegyptius ATCC 11116]
          Length = 361

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKELIVKVTGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|417842651|ref|ZP_12488732.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21127]
 gi|341951210|gb|EGT77787.1| Peptide chain release factor 1 [Haemophilus haemolyticus M21127]
          Length = 361

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/289 (50%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    ++G GVYG+LKFESG HRVQR+P
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVTGEGVYGQLKFESGGHRVQRIP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPTDLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|145634872|ref|ZP_01790579.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
 gi|145267738|gb|EDK07735.1| peptide chain release factor 1 [Haemophilus influenzae PittAA]
          Length = 361

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/289 (51%), Positives = 207/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W+ E++   ES+  GYKE    +SG GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWRVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + +++ G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVINGK-IDELIQPIITEYQADQLAAL 357


>gi|422659504|ref|ZP_16721929.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M302278]
 gi|331018122|gb|EGH98178.1| peptide chain release factor 1 [Pseudomonas syringae pv. lachrymans
           str. M302278]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/312 (47%), Positives = 217/312 (69%), Gaps = 4/312 (1%)

Query: 3   LISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDA 62
           L  +L   Q +++G ++L+ +   D DM +MA EE+     +   L++ L + LLPKD  
Sbjct: 51  LYKQLARVQGDLEGAQALLKDS--DPDMREMAVEEVRETKQQLVELEAQLQRMLLPKDPN 108

Query: 63  DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
           D R+  LE+RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A +
Sbjct: 109 DGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARV 168

Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDT 181
            G  VYGKLKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE   + +   DLR+DT
Sbjct: 169 EGDSVYGKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQQAIEINPADLRVDT 228

Query: 182 YRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRI 241
           YRS G+GGQH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S  
Sbjct: 229 YRSSGAGGQHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAA 288

Query: 242 HLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
             + +  R   +GSGDRSERIRTYNFPQGRVTDHRV +T +++ +++ G  +D  I+ LL
Sbjct: 289 ASAIASERKLLVGSGDRSERIRTYNFPQGRVTDHRVNLTLYSLDEVLAG-GVDAVIEPLL 347

Query: 302 LQQEMDAIASFG 313
            + + D +A+ G
Sbjct: 348 AEYQADQLAALG 359


>gi|204927641|ref|ZP_03218842.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|452120034|ref|YP_007470282.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. CFSAN001992]
 gi|204322983|gb|EDZ08179.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|451909038|gb|AGF80844.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Javiana str. CFSAN001992]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAESRRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 356


>gi|398974412|ref|ZP_10685039.1| peptide chain release factor 1 [Pseudomonas sp. GM25]
 gi|398141614|gb|EJM30530.1| peptide chain release factor 1 [Pseudomonas sp. GM25]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/304 (49%), Positives = 215/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A +    L+S L + LLPKD  D R+  LE
Sbjct: 59  QSDLEGAQALLKDS--DPDMREMAVEEVREAKELLITLESDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A I G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARIEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEREAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH NTT+SA+R+THIPTG  +  Q+ERSQH N+A+A+  L AKL + + +    + +  R
Sbjct: 237 QHVNTTDSAIRITHIPTGTVVECQEERSQHKNRARAMAWLAAKLNDQQTAAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  ++  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVEAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|358451346|ref|ZP_09161780.1| peptide chain release factor 1 [Marinobacter manganoxydans MnI7-9]
 gi|385330453|ref|YP_005884404.1| peptide chain release factor 1 [Marinobacter adhaerens HP15]
 gi|311693603|gb|ADP96476.1| peptide chain release factor 1 [Marinobacter adhaerens HP15]
 gi|357224579|gb|EHJ03110.1| peptide chain release factor 1 [Marinobacter manganoxydans MnI7-9]
          Length = 362

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 145/291 (49%), Positives = 207/291 (71%), Gaps = 2/291 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D DM +MA EEL LA  + + L   L + +LPKD  D ++  LE+RAGTGG+EA++FA D
Sbjct: 73  DADMREMAEEELQLAEQKSEELDEELQRLMLPKDPNDGKNVFLEIRAGTGGDEAAIFAGD 132

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++++ W+ EV+  +E +  G+KE  A ++G GVYG LKFESG HRVQRVP T
Sbjct: 133 LFRMYLRYAERRRWQVEVLSESEGEHGGFKELIARVAGDGVYGALKFESGAHRVQRVPET 192

Query: 147 EKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+ADE + + L   DLR+DT+R+ G+GGQH N T+SA+R+TH+P
Sbjct: 193 ESQGRIHTSACTVAVMPEADEAEAIELNKADLRVDTFRASGAGGQHVNKTDSAIRITHLP 252

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  Q+ERSQH N+AKAL +L ++L   E  R   S ++ R   +GSGDRSERIRTY
Sbjct: 253 TGIVVECQEERSQHKNRAKALSLLASRLQNAETERQQKSMAETRKSLVGSGDRSERIRTY 312

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           NFPQGRVTDHR+ +T + + +++ G +LD  +  L  + + + +AS    Q
Sbjct: 313 NFPQGRVTDHRINLTLYKLDEVIAG-DLDAVVVPLQQEHQAELLASLADDQ 362


>gi|456062469|ref|YP_007501439.1| Peptide chain release factor 1 [beta proteobacterium CB]
 gi|455439766|gb|AGG32704.1| Peptide chain release factor 1 [beta proteobacterium CB]
          Length = 359

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 146/291 (50%), Positives = 207/291 (71%), Gaps = 2/291 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M D A EE   A    + L+ +L K LLPKD  DER+  LE+RAGTGG+E++LFA 
Sbjct: 70  KDPEMKDFADEEQKQAQATMEELEGVLQKLLLPKDVNDERNVFLEIRAGTGGDESALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+ +MY R+++++GW+ EVV   ESDL GYKE    + G  VY +LKFESG HRVQRVP 
Sbjct: 130 DLLRMYTRFAERQGWRVEVVNAAESDLGGYKEVVLRLVGQSVYSRLKFESGGHRVQRVPQ 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+ADE++ V++   +LRIDT+R+ G+GGQH N T+SAVR+TH+
Sbjct: 190 TETQGRIHTSACTVAVMPEADELEAVKINPAELRIDTFRASGAGGQHINKTDSAVRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QD+RSQH N+ +A+KVL +++ +      H   ++ R   IGSGDRS+RIRT
Sbjct: 250 PTGTVVECQDDRSQHRNREQAMKVLVSRIMDAREREKHQLEAQTRKSLIGSGDRSDRIRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGST 315
           YNFPQGR+TDHR+ +T + I  MM+G +LD   +AL  + + + +A+ G +
Sbjct: 310 YNFPQGRITDHRINLTLYKIDAMMDG-DLDDLCNALASEHQAELLAALGDS 359


>gi|121635327|ref|YP_975572.1| peptide chain release factor 1 [Neisseria meningitidis FAM18]
 gi|385340540|ref|YP_005894412.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
 gi|416176949|ref|ZP_11609868.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
 gi|416190790|ref|ZP_11615901.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
 gi|421544981|ref|ZP_15991048.1| peptide chain release factor 1 [Neisseria meningitidis NM140]
 gi|421547070|ref|ZP_15993109.1| peptide chain release factor 1 [Neisseria meningitidis NM183]
 gi|421549316|ref|ZP_15995333.1| peptide chain release factor 1 [Neisseria meningitidis NM2781]
 gi|421553276|ref|ZP_15999241.1| peptide chain release factor 1 [Neisseria meningitidis NM576]
 gi|421557699|ref|ZP_16003598.1| peptide chain release factor 1 [Neisseria meningitidis 80179]
 gi|433467767|ref|ZP_20425217.1| peptide chain release factor 1 [Neisseria meningitidis 87255]
 gi|433493073|ref|ZP_20450160.1| peptide chain release factor 1 [Neisseria meningitidis NM586]
 gi|433495189|ref|ZP_20452252.1| peptide chain release factor 1 [Neisseria meningitidis NM762]
 gi|433497362|ref|ZP_20454392.1| peptide chain release factor 1 [Neisseria meningitidis M7089]
 gi|433499455|ref|ZP_20456460.1| peptide chain release factor 1 [Neisseria meningitidis M7124]
 gi|433501391|ref|ZP_20458373.1| peptide chain release factor 1 [Neisseria meningitidis NM174]
 gi|433503455|ref|ZP_20460413.1| peptide chain release factor 1 [Neisseria meningitidis NM126]
 gi|166223577|sp|A1KV95.1|RF1_NEIMF RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|120867033|emb|CAM10796.1| peptide chain release factor I [Neisseria meningitidis FAM18]
 gi|325132818|gb|EGC55498.1| peptide chain release factor 1 [Neisseria meningitidis M6190]
 gi|325138721|gb|EGC61273.1| peptide chain release factor 1 [Neisseria meningitidis ES14902]
 gi|325198784|gb|ADY94240.1| peptide chain release factor 1 [Neisseria meningitidis G2136]
 gi|402322042|gb|EJU57512.1| peptide chain release factor 1 [Neisseria meningitidis NM183]
 gi|402322268|gb|EJU57732.1| peptide chain release factor 1 [Neisseria meningitidis NM140]
 gi|402324138|gb|EJU59575.1| peptide chain release factor 1 [Neisseria meningitidis NM2781]
 gi|402328408|gb|EJU63779.1| peptide chain release factor 1 [Neisseria meningitidis NM576]
 gi|402333862|gb|EJU69158.1| peptide chain release factor 1 [Neisseria meningitidis 80179]
 gi|432201652|gb|ELK57728.1| peptide chain release factor 1 [Neisseria meningitidis 87255]
 gi|432226864|gb|ELK82584.1| peptide chain release factor 1 [Neisseria meningitidis NM586]
 gi|432228721|gb|ELK84417.1| peptide chain release factor 1 [Neisseria meningitidis NM762]
 gi|432232319|gb|ELK87965.1| peptide chain release factor 1 [Neisseria meningitidis M7089]
 gi|432233021|gb|ELK88655.1| peptide chain release factor 1 [Neisseria meningitidis M7124]
 gi|432233860|gb|ELK89484.1| peptide chain release factor 1 [Neisseria meningitidis NM174]
 gi|432239476|gb|ELK95029.1| peptide chain release factor 1 [Neisseria meningitidis NM126]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +E+RAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIGELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


>gi|408483921|ref|ZP_11190140.1| peptide chain release factor 1 [Pseudomonas sp. R81]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 148/304 (48%), Positives = 215/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKEKLAALEGDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLRIDTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRIDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|254778803|ref|YP_003056908.1| peptide chain release factor 1 [Helicobacter pylori B38]
 gi|254000714|emb|CAX28630.1| Peptide chain release factor 1 (RF-1) [Helicobacter pylori B38]
          Length = 352

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 140/279 (50%), Positives = 205/279 (73%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E  EDK++ ++A EEL +   ++  L++ + + L+PKD  D+++  LE+RAGTGG+EA +
Sbjct: 66  ELLEDKELSELAKEELKILEIQKSDLETAIKQLLIPKDPNDDKNIYLELRAGTGGDEAGI 125

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           F  D+FK Y RY+  K WK E+V  +E+ + GYKE  A I G GVY + KFE+G HRVQR
Sbjct: 126 FVGDLFKAYCRYADLKKWKVEIVSSSENSVGGYKEIIALIKGKGVYSRFKFEAGTHRVQR 185

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
           VP TE  GR+HTSA++VAI+P+ D+V+V +   DL+I+ +R+GG GGQ  NTT+SAVR+T
Sbjct: 186 VPETESQGRIHTSAITVAIMPEVDDVEVSINPSDLKIEVFRAGGHGGQCVNTTDSAVRIT 245

Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
           H+PT +++S+QDE+SQH NK KALK+L  +LYE +     L+ +K R EQ+GSGDRSERI
Sbjct: 246 HLPTNISVSMQDEKSQHKNKDKALKILKVRLYEKQIEEQQLANAKDRKEQVGSGDRSERI 305

Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL 301
           RTYN+PQ R+++HR+ +T +++ ++M   NLD  I+ L+
Sbjct: 306 RTYNYPQNRLSEHRINLTLYSLEEIMLSGNLDEVINPLI 344


>gi|254180490|ref|ZP_04887088.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
 gi|184211029|gb|EDU08072.1| peptide chain release factor 1 [Burkholderia pseudomallei 1655]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/295 (51%), Positives = 206/295 (69%), Gaps = 2/295 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D  M D A +EL  A D   RL + L   LLPKD  DER+  +E+RAGTGG+E++L
Sbjct: 67  ELLADASMRDFAEDELRGARDRMGRLAAELQTMLLPKDPNDERNIFVEIRAGTGGDESAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY++++ W+ E++  + SDL GYKE    I+G G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYLRYAERQRWQVEMMSESPSDLGGYKEVIVRIAGYGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ +V +   DLRIDT+R+ G+GGQH N T+SAVRV
Sbjct: 187 VPATETQGRIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRV 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           THI TG+ +  QD+RSQH NK +ALKVL A++ + +    H   +  R   IGSGDRSER
Sbjct: 247 THISTGIVVECQDDRSQHKNKDRALKVLAARIKDKQYHEQHAKEAATRKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGSTQ 316
           IRTYNFPQGR+TDHR+ +T + +  +M+G +LD  I AL+ + + + +AS G  +
Sbjct: 307 IRTYNFPQGRMTDHRINLTLYKLEQIMDG-DLDELIAALVSEHQAELLASLGDAE 360


>gi|429123926|ref|ZP_19184458.1| peptide chain release factor 1 [Brachyspira hampsonii 30446]
 gi|426280087|gb|EKV57105.1| peptide chain release factor 1 [Brachyspira hampsonii 30446]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/307 (48%), Positives = 213/307 (69%), Gaps = 1/307 (0%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
           +L+   KEI+    +I     DK++ DMA  E+     +++ + + L   LLPKD  D +
Sbjct: 51  KLKVVLKEIEESNEMINNPDTDKELKDMALLEIEELNQKKEDIINGLRLLLLPKDKNDGK 110

Query: 66  DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
           + I+E+R GTGG+E++LF  D+F+MY R+ ++   K E++  + ++L GYKE   ++SG 
Sbjct: 111 NIIVEIRVGTGGDESALFVGDLFRMYTRFIERTNLKMEIIDTSPTELGGYKEVIFSVSGK 170

Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
             Y  LKFESG HRVQR+P TE  GR+HTSA +VA++P+A E DV +++ED+R+D +RS 
Sbjct: 171 DAYRTLKFESGTHRVQRIPATESGGRIHTSASTVAVMPEAMESDVVIKDEDIRVDIFRSS 230

Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
           G GGQ  NTT+SAVR+TH+PTG+ +  QDE+SQH NKAKALKVL A++YE E +      
Sbjct: 231 GPGGQSVNTTDSAVRITHLPTGLVVQCQDEKSQHKNKAKALKVLRARIYEKEEAERKAKE 290

Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           +K R EQIGSGDRSERIRTYNFPQ RVTDHR+ +T + +   M+GE  +I  DAL  +++
Sbjct: 291 AKERREQIGSGDRSERIRTYNFPQNRVTDHRINVTLYKLDRFMDGEITEI-TDALFKKEQ 349

Query: 306 MDAIASF 312
            D +AS+
Sbjct: 350 EDMLASY 356


>gi|238763000|ref|ZP_04623967.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
 gi|238698758|gb|EEP91508.1| Peptide chain release factor 1 [Yersinia kristensenii ATCC 33638]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 154/310 (49%), Positives = 217/310 (70%), Gaps = 6/310 (1%)

Query: 4   ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
             E R+ Q +I+  + ++    ED +M +MA +EL  A    + L+  L   LLPKD  D
Sbjct: 52  FKEWRSVQDDIEAAEMML----EDPEMREMAQDELKEAKARSEELEQQLQVLLLPKDPDD 107

Query: 64  ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
           ERDC LE+RAGTGG+EA++FA D+F+MY RY++ + WK E++  +E +  GYKE  A +S
Sbjct: 108 ERDCFLEIRAGTGGDEAAIFAGDMFRMYSRYAEARRWKVEIMSASEGEHGGYKEVIAKVS 167

Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNE-DLRIDTY 182
           G GV+G+LKFESG HRVQRVP TE  GR+HTSA +VA++P   E ++   N  DLRIDT+
Sbjct: 168 GDGVFGQLKFESGGHRVQRVPETESQGRIHTSACTVAVMPAIPEAEMPEINAGDLRIDTF 227

Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
           RS G+GGQH NTT+SA+R+THIPTG+ +  QDERSQH NKAKA+ VL A++   E  +  
Sbjct: 228 RSSGAGGQHVNTTDSAIRITHIPTGIVVECQDERSQHKNKAKAMSVLGARIRAAEMQKRQ 287

Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
           L+ +  R   +GSGDRS+R RTYNFPQGRVTDHR+ +T + + ++MEG+ LD+ I  ++ 
Sbjct: 288 LAEASERRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVMEGK-LDMLIQPIVQ 346

Query: 303 QQEMDAIASF 312
           + + D +++ 
Sbjct: 347 EYQADQLSAL 356


>gi|390943057|ref|YP_006406818.1| peptide chain release factor 1 (bRF-1) [Belliella baltica DSM
           15883]
 gi|390416485|gb|AFL84063.1| bacterial peptide chain release factor 1 (bRF-1) [Belliella baltica
           DSM 15883]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/302 (50%), Positives = 211/302 (69%), Gaps = 3/302 (0%)

Query: 14  IDGLKSL--IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEV 71
           +D +KS   I E  +D D  +MA  EL    D + +L+  L + L+PKD  D +DCILE+
Sbjct: 55  LDNIKSSKEILEKEKDPDFRNMAKAELDELKDRQIQLEEDLKQQLIPKDPNDSKDCILEI 114

Query: 72  RAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKL 131
           R GTGG+EA++FA D+F+MY+R+  K+GWK  V+ +T     GYKE  + I+G  VYG +
Sbjct: 115 RGGTGGDEAAIFAGDLFRMYQRFCDKQGWKLTVLDLTFGSSGGYKEIISTITGADVYGMM 174

Query: 132 KFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQH 191
           KFESG+HRVQRVP+TE  GRVHTSA SVA+LP+ DEV+V +   ++R DTY S G GGQ 
Sbjct: 175 KFESGVHRVQRVPMTETQGRVHTSAASVAVLPEMDEVEVNIDMNEVRKDTYCSSGPGGQS 234

Query: 192 ANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSE 251
            NTT SAVR+THIP+G+ ++ QDE+SQ  N  KALKVL ++LYE+E ++ + +    R  
Sbjct: 235 VNTTYSAVRLTHIPSGLVVTCQDEKSQIKNFEKALKVLRSRLYEIELAKHNDAVGAQRKS 294

Query: 252 QIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIAS 311
            +GSGDRS++IRTYN+PQ RVTDHR+  T + + D+MEG N++ FI AL   + ++ + +
Sbjct: 295 MVGSGDRSDKIRTYNYPQSRVTDHRINKTVYNLPDVMEG-NIEDFISALRFAENVEKMKT 353

Query: 312 FG 313
            G
Sbjct: 354 SG 355


>gi|449328067|gb|AGE94368.1| peptide chain release factor 1 [Citrobacter amalonaticus Y19]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/288 (52%), Positives = 210/288 (72%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A D+ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELREAKDKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++  +E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAETRRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKA+ VL A++   E +R   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKAMSVLGARIRAAEVARRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDEAMEGK-LDMLIEPIVQEYQADQLAAL 356


>gi|335041017|ref|ZP_08534135.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
           TA2.A1]
 gi|334179167|gb|EGL81814.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
           TA2.A1]
          Length = 356

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 141/279 (50%), Positives = 200/279 (71%), Gaps = 1/279 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D ++ +M  EE+ +  ++++ L+  L   LLPKD  DE++ I+E+R   GG+EA LFA D
Sbjct: 70  DDELREMVKEEIAVLSEKKEALEERLKILLLPKDPNDEKNVIVEIRGAAGGDEACLFAGD 129

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           ++KMY RY++ KGWK EV+    +DL GYKE   +I+G G Y +LK+ESG HRVQRVP+T
Sbjct: 130 LYKMYTRYAEDKGWKIEVIEAHPNDLGGYKEIIFSINGKGAYSRLKYESGAHRVQRVPVT 189

Query: 147 EKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPT 206
           E  GR+HTS  +VA+LP+A+E+DV +  +D+R+D + S G GGQ  NTT SAVR+THIPT
Sbjct: 190 ESGGRIHTSTATVAVLPEAEEIDVEIDEKDIRVDVFCSSGPGGQSVNTTQSAVRLTHIPT 249

Query: 207 GMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYN 266
           G+ +S QDE+SQH NK KA+K+L A++Y+          + +R   +G+GDRSERIRTYN
Sbjct: 250 GIVVSCQDEKSQHKNKEKAMKILRARVYDKYLQEAQNEYASIRKSAVGTGDRSERIRTYN 309

Query: 267 FPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
           FPQ RVTDHR+G+T H +  ++ GE LD  IDAL++ ++
Sbjct: 310 FPQSRVTDHRIGLTLHKLDQVLNGE-LDEIIDALIVHEQ 347


>gi|66810982|ref|XP_639198.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
 gi|60467811|gb|EAL65826.1| peptide chain release factor 1 [Dictyostelium discoideum AX4]
          Length = 430

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/299 (49%), Positives = 216/299 (72%), Gaps = 3/299 (1%)

Query: 6   ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELC-LAIDEEKRLQSLLLKSLLPKDDADE 64
           +L  K KE+  L++++ E + D+D   M   ++  L  +E + L+  LL SLLP    D 
Sbjct: 123 DLIEKLKELKELQTMLVEET-DEDGKQMIKSDINKLKQEEIEPLEKQLLFSLLPGSKDDA 181

Query: 65  RDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISG 124
            D ILE+RAGTGG EA LF  DV++MY  Y  +KGW FE + ++ +++ GY++ + ++SG
Sbjct: 182 GDAILEIRAGTGGSEAQLFTQDVYEMYRSYCLQKGWTFEPLELSVTEVGGYRDVTVSVSG 241

Query: 125 VGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRS 184
            GV+G LK+ESG+HRVQRVPLTE  GR+HTS ++VAILP+  +VD+++ + DL++D YRS
Sbjct: 242 KGVFGFLKYESGVHRVQRVPLTETQGRIHTSTITVAILPEPKDVDIQIHDRDLKVDIYRS 301

Query: 185 GGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLS 244
            G+GGQ  NTT+SAVR+TH+PTG+T+++QDERSQH N++KA+K+L A++YE ER R+   
Sbjct: 302 SGNGGQSVNTTDSAVRITHLPTGITVAMQDERSQHQNRSKAMKILKARIYERERIRLQNE 361

Query: 245 RSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
           R   R+ QIGS  RSERIRTYN+PQ R+TDHRV I  + ++  M  + LD FID +L++
Sbjct: 362 RVSERNAQIGSALRSERIRTYNYPQDRITDHRVSINGN-LNSCMNSDGLDSFIDEILVE 419


>gi|417790281|ref|ZP_12437847.1| peptide chain release factor 1 [Cronobacter sakazakii E899]
 gi|429115863|ref|ZP_19176781.1| Peptide chain release factor 1 [Cronobacter sakazakii 701]
 gi|449307988|ref|YP_007440344.1| peptide chain release factor 1 [Cronobacter sakazakii SP291]
 gi|333955636|gb|EGL73373.1| peptide chain release factor 1 [Cronobacter sakazakii E899]
 gi|426318992|emb|CCK02894.1| Peptide chain release factor 1 [Cronobacter sakazakii 701]
 gi|449098021|gb|AGE86055.1| peptide chain release factor 1 [Cronobacter sakazakii SP291]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/288 (51%), Positives = 208/288 (72%), Gaps = 2/288 (0%)

Query: 27  DKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVD 86
           D +M DMA +EL  A  + + L+  L   LLPKD  DER+  +EVRAGTGG+EA+LFA D
Sbjct: 71  DPEMRDMAQDELLEAKAKSEALEQELQLLLLPKDPDDERNAFVEVRAGTGGDEAALFAGD 130

Query: 87  VFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLT 146
           +F+MY RY++ + W+ E++  +E +  GYKE  A ISG GVYG+LKFESG HRVQRVP T
Sbjct: 131 LFRMYSRYAESRRWRVEIMSASEGEHGGYKEVIAKISGEGVYGRLKFESGGHRVQRVPAT 190

Query: 147 EKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
           E  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+P
Sbjct: 191 ESQGRIHTSACTVAVMPELPEAELPEINPADLRIDTFRSSGAGGQHVNTTDSAIRITHLP 250

Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
           TG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RTY
Sbjct: 251 TGIVVECQDERSQHKNKAKALAVLGARIHAAEVAKRQQAEASTRRNLLGSGDRSDRNRTY 310

Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           NFPQGRVTDHR+ +T + + ++MEG+ LD  I+ ++ + + D +A+  
Sbjct: 311 NFPQGRVTDHRINLTLYRLDEVMEGK-LDALIEPIIQEHQADQLAALA 357


>gi|220932633|ref|YP_002509541.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
 gi|219993943|gb|ACL70546.1| peptide chain release factor 1 [Halothermothrix orenii H 168]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 141/269 (52%), Positives = 193/269 (71%), Gaps = 1/269 (0%)

Query: 33  MATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYE 92
           +A  EL      +++++  L   LLP+D  DE++ I+E+RAG GG+EA LFA D+++MY 
Sbjct: 79  LAEMELKELTPRKEKMEDELTYMLLPEDPNDEKNVIVEIRAGAGGDEAGLFAADLYRMYS 138

Query: 93  RYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRV 152
           RY++ K WK EV+    S + GYKE    + G  VY +LK+ESG+HRVQRVP TE  GR+
Sbjct: 139 RYAESKNWKTEVISANASGIGGYKEIIFTVEGKNVYSRLKYESGVHRVQRVPTTESGGRI 198

Query: 153 HTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISI 212
           HTS  +VA+LP+A+EVDV +   DLRID YRS G GGQ  NTT+SAVR+TH PTG+ +S 
Sbjct: 199 HTSTATVAVLPEAEEVDVDIDPNDLRIDVYRSSGPGGQSVNTTDSAVRITHEPTGLVVSC 258

Query: 213 QDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRV 272
           QDE+SQH NKA+A+++L A+L E+          + R  QIGSGDRSE+IRTYNFPQGRV
Sbjct: 259 QDEKSQHKNKARAMRILRARLKELMEKEKQAEIDEARKSQIGSGDRSEKIRTYNFPQGRV 318

Query: 273 TDHRVGITHHAISDMMEGENLDIFIDALL 301
           +DHR+ +T H ++D+++G NLD+ ID L+
Sbjct: 319 SDHRINLTIHQLNDILDG-NLDLIIDNLI 346


>gi|21672964|ref|NP_661029.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
 gi|28201874|sp|Q8KG45.1|RF1_CHLTE RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|21646023|gb|AAM71371.1| peptide chain release factor 1 [Chlorobium tepidum TLS]
          Length = 357

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/294 (51%), Positives = 210/294 (71%), Gaps = 4/294 (1%)

Query: 8   RTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDC 67
           RTK K++D   S+  +   D +M  +  EE     +   +L+  L   LLPKD+AD R+ 
Sbjct: 53  RTK-KQLDEAHSM-QKNENDPEMRALVEEEAGELQERLPKLEQQLKILLLPKDEADSRNA 110

Query: 68  ILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG-YKEASAAISGVG 126
           I+E+RAGTGG+EA LFA D+ +MY+RY++++GW  + + V+E  + G  KE S  +SG  
Sbjct: 111 IIEIRAGTGGDEAGLFAADLMRMYQRYAERQGWSCQTLEVSEGSVPGSLKEVSLEVSGHN 170

Query: 127 VYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGG 186
           VYG LKFESG+HRVQRVP TE  GR+HTSA SVA+LP+A+EVDV +R EDL IDT+RSGG
Sbjct: 171 VYGILKFESGVHRVQRVPETETQGRIHTSAASVAVLPEAEEVDVEIRKEDLLIDTFRSGG 230

Query: 187 SGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRS 246
            GGQ+ N   +AVR+TH+P+G+ ++ Q+ERSQ  N+ +A+K+L +KLY+++ +    SR+
Sbjct: 231 KGGQNVNKVETAVRITHVPSGIVVACQEERSQLQNRERAMKMLRSKLYDLQIAEQQKSRA 290

Query: 247 KLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
            LR   + +GDRS +IRTYNFPQ RVTDHR+G T HA+  +M+GE LD  I+AL
Sbjct: 291 DLRRSMVTTGDRSAKIRTYNFPQSRVTDHRIGFTSHALPQIMQGE-LDPLIEAL 343


>gi|145298193|ref|YP_001141034.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|418361594|ref|ZP_12962246.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida 01-B526]
 gi|166223526|sp|A4SK64.1|RF1_AERS4 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|142850965|gb|ABO89286.1| Protein chain release factor A [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|356687180|gb|EHI51765.1| peptide chain release factor 1 [Aeromonas salmonicida subsp.
           salmonicida 01-B526]
          Length = 362

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 144/316 (45%), Positives = 212/316 (67%), Gaps = 4/316 (1%)

Query: 1   MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
           +H     R  ++ ++  K ++ E  +D D+ +MA EEL LA    +  +  L   LLP+D
Sbjct: 49  VHAFQRFRQAEENLEATKLMLEE--DDADLREMAQEELPLAKSTLEEQEQALQVMLLPRD 106

Query: 61  DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
             D+ +C LE+RAG GG+EA++FA D+F+MY RY++++GW+  +V   + +  GYKE  A
Sbjct: 107 PKDDNNCYLEIRAGAGGDEAAIFAGDLFRMYSRYAERQGWRISIVSCNDGEHGGYKEVIA 166

Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRI 179
            + G  VYG+LKFESG HRVQRVP TE  GRVHTSA +VA+LP+  E + + +   DL+I
Sbjct: 167 KVDGEHVYGRLKFESGGHRVQRVPETESQGRVHTSACTVAVLPEVPEAEQIEINANDLKI 226

Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
           DT+R+ G+GGQH N T+SA+R+TH+PTG+ +  QDERSQH N+AKA+ VL A+L   E  
Sbjct: 227 DTFRASGAGGQHVNKTDSAIRITHLPTGLVVECQDERSQHKNRAKAMSVLSARLQAAEDE 286

Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
           R   +    R   +GSGDRSERIRTYN+PQGR+++HR+ +T + + ++MEG +LD  I  
Sbjct: 287 RHRAAEQSTRRNLVGSGDRSERIRTYNYPQGRLSEHRINLTLYRLGEIMEG-DLDCIISP 345

Query: 300 LLLQQEMDAIASFGST 315
           ++ + + D +AS    
Sbjct: 346 MIQEYQADQLASLAEN 361


>gi|395650290|ref|ZP_10438140.1| peptide chain release factor 1 [Pseudomonas extremaustralis 14-3
           substr. 14-3b]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 215/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|339999607|ref|YP_004730490.1| peptide chain release factor 1 (RF-1) [Salmonella bongori NCTC
           12419]
 gi|339512968|emb|CCC30712.1| peptide chain release factor 1 (RF-1) [Salmonella bongori NCTC
           12419]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 70  DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 129

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 130 DLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 189

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 190 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 249

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 250 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRT 309

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 310 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 356


>gi|213859593|ref|ZP_03385297.1| peptide chain release factor 1 [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 317

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/288 (52%), Positives = 212/288 (73%), Gaps = 2/288 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D +M +MA EEL  A ++ ++L+  L   LLPKD  DER+  LEVRAGTGG+EA+LFA 
Sbjct: 27  DDPEMREMAQEELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAG 86

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY RY++ + W+ E++ ++E +  GYKE  A ISG GVYG+LKFESG HRVQRVP 
Sbjct: 87  DLFRMYSRYAEARRWRVEIMSMSEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPA 146

Query: 146 TEKSGRVHTSAVSVAILPQADEVDVR-LRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GR+HTSA +VA++P+  E ++  +   DLRIDT+RS G+GGQH NTT+SA+R+TH+
Sbjct: 147 TESQGRIHTSACTVAVMPELPEAELPDINPADLRIDTFRSSGAGGQHVNTTDSAIRITHL 206

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG+ +  QDERSQH NKAKAL VL A+++  E ++   + +  R   +GSGDRS+R RT
Sbjct: 207 PTGIVVECQDERSQHKNKAKALSVLGARIHAAETAKRQQAEASTRRNLLGSGDRSDRNRT 266

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           YNFPQGRVTDHR+ +T + + + MEG+ LD+ I+ ++ + + D +A+ 
Sbjct: 267 YNFPQGRVTDHRINLTLYRLDETMEGK-LDMLIEPIVQEHQADLLAAL 313


>gi|68249924|ref|YP_249036.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
 gi|68058123|gb|AAX88376.1| peptide chain release factor 1 [Haemophilus influenzae 86-028NP]
          Length = 361

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 149/289 (51%), Positives = 206/289 (71%), Gaps = 7/289 (2%)

Query: 26  EDKDMLDMATEELCLAIDE-EKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFA 84
           E K+M  M  EE    I+E E++LQ LLL    PKD  DE +C LE+RAGTGG+EA +FA
Sbjct: 74  EMKEMAQMEIEESKAEIEEVEQQLQILLL----PKDPNDEYNCYLEIRAGTGGDEAGIFA 129

Query: 85  VDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVP 144
            D+F+MY RY++ K W  E++   ES+  GYKE    +SG GVYG+LKFESG HRVQRVP
Sbjct: 130 GDLFRMYSRYAESKRWCVEMLSANESEQGGYKEVIVKVSGEGVYGQLKFESGGHRVQRVP 189

Query: 145 LTEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTH 203
            TE  GR+HTSA +VA++P+  E ++  +   DLRIDTYRS G+GGQH NTT+SAVR+TH
Sbjct: 190 KTESQGRIHTSACTVAVMPELPESEMPEINPADLRIDTYRSSGAGGQHVNTTDSAVRITH 249

Query: 204 IPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIR 263
           IPTG+ +  QDERSQH NKAKA+ VL +++ + E+ R    ++ +R   +GSGDRS++IR
Sbjct: 250 IPTGIVVECQDERSQHKNKAKAMSVLASRIVQAEQERQAAEQTDMRRNLLGSGDRSDKIR 309

Query: 264 TYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
           TYN+PQGRVTDHR+ +T + + ++M G+ +D  I  ++ + + D +A+ 
Sbjct: 310 TYNYPQGRVTDHRINLTIYRLDEVMNGK-IDELIQPIITEYQADQLAAL 357


>gi|261253598|ref|ZP_05946171.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|417955853|ref|ZP_12598859.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|260936989|gb|EEX92978.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
           33934]
 gi|342812140|gb|EGU47155.1| peptide chain release factor 1 [Vibrio orientalis CIP 102891 = ATCC
           33934]
          Length = 362

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/289 (49%), Positives = 208/289 (71%), Gaps = 2/289 (0%)

Query: 26  EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
           +D++M +MA EE+  A +  +RL   L   LLPKD  D+R+C LE+RAG GG+EA +FA 
Sbjct: 72  DDEEMREMAQEEIKDAKETIERLNDELQILLLPKDPNDDRNCFLEIRAGAGGDEAGIFAG 131

Query: 86  DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
           D+F+MY ++++KKGW+ EV+   ES+  GYKE  A +SG G YG LKFESG HRVQRVP 
Sbjct: 132 DLFRMYSKFAEKKGWRVEVMSSNESEHGGYKEMIAKVSGDGAYGVLKFESGGHRVQRVPA 191

Query: 146 TEKSGRVHTSAVSVAILPQADEVDV-RLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHI 204
           TE  GRVHTSA +VA++ +  E ++  ++  DL+IDT+R+ G+GGQH NTT+SA+R+TH+
Sbjct: 192 TESQGRVHTSACTVAVMAEIPEAEIPEIKAADLKIDTFRASGAGGQHVNTTDSAIRITHL 251

Query: 205 PTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRT 264
           PTG  +  QDERSQH NKAKA+ VL A++ + E ++     S  R   +GSGDRS+RIRT
Sbjct: 252 PTGTVVECQDERSQHKNKAKAMAVLAARIIQAEEAKRAAEVSDTRRNLLGSGDRSDRIRT 311

Query: 265 YNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           YN+PQGRV+DHR+ +T + ++++MEG ++   +D ++ + + D +A+  
Sbjct: 312 YNYPQGRVSDHRINLTVYRLNEVMEG-DVSCLVDPVIQEHQADQLAALA 359


>gi|340361634|ref|ZP_08684052.1| peptide chain release factor RF1 [Neisseria macacae ATCC 33926]
 gi|419798872|ref|ZP_14324259.1| peptide chain release factor 1 [Neisseria sicca VK64]
 gi|339888384|gb|EGQ77849.1| peptide chain release factor RF1 [Neisseria macacae ATCC 33926]
 gi|385693459|gb|EIG24106.1| peptide chain release factor 1 [Neisseria sicca VK64]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +L+   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DLEEITNALIAEHQAELLAAMG 357


>gi|298369801|ref|ZP_06981117.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281261|gb|EFI22750.1| peptide chain release factor 1 [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +EVRAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDTLDTELQKLLLPKDADDDKNIFIEVRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLRIDT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRIDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++       +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREAQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G +L+   +AL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDG-DLEEITNALIAEHQAELLAAMG 357


>gi|229588283|ref|YP_002870402.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
 gi|259585227|sp|C3KDC6.1|RF1_PSEFS RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|229360149|emb|CAY47006.1| peptide chain release factor 1 [Pseudomonas fluorescens SBW25]
          Length = 360

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 147/304 (48%), Positives = 215/304 (70%), Gaps = 4/304 (1%)

Query: 11  QKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILE 70
           Q +++G ++L+ +   D DM +MA EE+  A ++   L+  L + LLPKD  D R+  LE
Sbjct: 59  QADLEGAQALLKDS--DPDMREMAVEEVREAKEKLAELEGDLQRMLLPKDPNDGRNVFLE 116

Query: 71  VRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGK 130
           +RAGTGG+EA++F+ D+F+MY RY++++GW+ E++   E +  GYKE  A + G  VYGK
Sbjct: 117 IRAGTGGDEAAIFSGDLFRMYSRYAERRGWRVEILSENEGEHGGYKEVIARVEGDNVYGK 176

Query: 131 LKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVD-VRLRNEDLRIDTYRSGGSGG 189
           LKFESG HRVQRVP TE  GR+HTSA +VA+LP+ DE + + +   DLR+DTYRS G+GG
Sbjct: 177 LKFESGAHRVQRVPATESQGRIHTSACTVAVLPEPDEQEAIEINPADLRVDTYRSSGAGG 236

Query: 190 QHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLR 249
           QH N T+SA+R+TH+P+G+ +  Q+ERSQH N+A+A+  L AKL + + S    + +  R
Sbjct: 237 QHVNKTDSAIRITHLPSGIVVECQEERSQHKNRARAMSWLSAKLNDQQTSAAANAIASER 296

Query: 250 SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAI 309
              +GSGDRSERIRTYNF QGRVTDHRV +T +++ +++ G  +D  I+ LL + + D +
Sbjct: 297 KLLVGSGDRSERIRTYNFAQGRVTDHRVNLTLYSLDEILAG-GVDAVIEPLLAEYQADQL 355

Query: 310 ASFG 313
           A+ G
Sbjct: 356 AAIG 359


>gi|59801687|ref|YP_208399.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA 1090]
 gi|240017030|ref|ZP_04723570.1| peptide chain release factor 1 [Neisseria gonorrhoeae FA6140]
 gi|268604103|ref|ZP_06138270.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
 gi|75432438|sp|Q5F750.1|RF1_NEIG1 RecName: Full=Peptide chain release factor 1; Short=RF-1
 gi|59718582|gb|AAW89987.1| putative peptide chain release factor I [Neisseria gonorrhoeae FA
           1090]
 gi|268588234|gb|EEZ52910.1| peptide chain release factor 1 [Neisseria gonorrhoeae PID1]
          Length = 358

 Score =  304 bits (779), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 207/292 (70%), Gaps = 2/292 (0%)

Query: 23  ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
           E   D +M D A EE+  A  +   L + L K LLPKD  D+++  +E+RAGTGG+EA+L
Sbjct: 67  EMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLPKDADDDKNIFIEIRAGTGGDEAAL 126

Query: 83  FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
           FA D+ +MY RY+++  W+ E+V   ES+L GYKE  A I G+G Y +LKFESG HRVQR
Sbjct: 127 FAGDLLRMYSRYAERNRWQVEIVSANESELGGYKEVIARIVGLGAYSRLKFESGGHRVQR 186

Query: 143 VPLTEKSGRVHTSAVSVAILPQADEV-DVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRV 201
           VP TE  GR+HTSA +VA++P+ADE+ D+ L   DLR DT+R+ G+GGQH N T+SAVR+
Sbjct: 187 VPATESQGRIHTSACTVAVMPEADELEDIELNPADLRTDTFRASGAGGQHINKTDSAVRI 246

Query: 202 THIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSER 261
           TH+PTGM +  QD RSQH NKA+A+KVL A+L + ++  +    +  R   IGSGDRSER
Sbjct: 247 THLPTGMVVECQDGRSQHANKAQAMKVLAARLNDAQKREVQAKEAAERKSLIGSGDRSER 306

Query: 262 IRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
           IRTYN+PQGRVTDHR+ +T H +  +M+G+  +I  DAL+ + + + +A+ G
Sbjct: 307 IRTYNYPQGRVTDHRINLTLHKLDFVMDGDLAEI-TDALIAEHQAELLAAMG 357


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.132    0.366 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,575,327,589
Number of Sequences: 23463169
Number of extensions: 185101231
Number of successful extensions: 503313
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8495
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 486309
Number of HSP's gapped (non-prelim): 8787
length of query: 316
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 174
effective length of database: 9,027,425,369
effective search space: 1570772014206
effective search space used: 1570772014206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 76 (33.9 bits)