BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021200
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7HTY3|RF1_PARL1 Peptide chain release factor 1 OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=prfA PE=3
SV=1
Length = 355
Score = 354 bits (909), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 162/286 (56%), Positives = 219/286 (76%)
Query: 28 KDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAVDV 87
+DM +MA EE+ +E RL+ + LLPKD AD+R+ ILEVRAGTGG+EA+LFA D+
Sbjct: 67 RDMAEMAKEEIARLNEELPRLEHEVQLMLLPKDAADDRNVILEVRAGTGGDEAALFAGDL 126
Query: 88 FKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPLTE 147
F+MYERY+ +GWK E++ +E ++ GYKE A ISG GVY KLKFESG+HRVQRVP+TE
Sbjct: 127 FRMYERYASNQGWKVELIAASEGEMGGYKEIIAGISGPGVYAKLKFESGVHRVQRVPVTE 186
Query: 148 KSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTG 207
GR+HTSA +VA+LP+A+EVDV + ++DLRID YR+ G+GGQH N T SAVR+TH+PTG
Sbjct: 187 GGGRIHTSAATVAVLPEAEEVDVEIEDKDLRIDVYRASGAGGQHVNKTESAVRITHLPTG 246
Query: 208 MTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNF 267
+ ++ QDE+SQH NKA+A+++L A++++ ER R+ RS R Q+GSGDRSERIRTYNF
Sbjct: 247 IVVAQQDEKSQHKNKARAMQILRARIFDAERERLDRERSAARKGQVGSGDRSERIRTYNF 306
Query: 268 PQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
PQ RVTDHR+ +T H + ++EGE L IDAL+ + + +A+ G
Sbjct: 307 PQSRVTDHRINLTLHKLDQVLEGEALGELIDALIAEDQAARLAAMG 352
>sp|A5V9C3|RF1_SPHWW Peptide chain release factor 1 OS=Sphingomonas wittichii (strain
RW1 / DSM 6014 / JCM 10273) GN=prfA PE=3 SV=1
Length = 360
Score = 353 bits (906), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 232/310 (74%), Gaps = 6/310 (1%)
Query: 6 ELRTKQKEIDGLKSLIYECSEDKDMLDMA---TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
E+R + E+D LK + + + D ++ MA EE+ + E +R +L LK LLP+D A
Sbjct: 52 EVRRLRAELDVLKGMAEDEAGDAELRAMAIEEAEEIRARLPEAER--ALALK-LLPRDAA 108
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
DER +LE+RAGTGG+EA+LFA D+F+MY+RY++ +GW+ E++ + +DL GYKE A++
Sbjct: 109 DERSAMLEIRAGTGGDEAALFAGDLFRMYQRYAEDRGWRVELISASAADLGGYKEVVASV 168
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
+G GV+ +LKFESG+HRVQRVP+TE GR+HTSA +VA+LP+A+EVDV + ++DLRID Y
Sbjct: 169 TGAGVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAEEVDVHIDDKDLRIDVY 228
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
RS G GGQ NTT+SAVR+TH+PTG+ + QDE+SQH NKAKALKVL +LYEMER R+
Sbjct: 229 RSSGPGGQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALKVLRTRLYEMERERLA 288
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
R+ R +GSGDRSERIRTYNFPQGRVTDHR+ +T H +S+++EG LD + AL+
Sbjct: 289 SERAGARKSMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLSEILEGPGLDDLVGALIA 348
Query: 303 QQEMDAIASF 312
+ E + +A
Sbjct: 349 EDEAERLAQL 358
>sp|A8GXI1|RF1_RICB8 Peptide chain release factor 1 OS=Rickettsia bellii (strain OSU
85-389) GN=prfA PE=3 SV=1
Length = 357
Score = 352 bits (904), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/302 (54%), Positives = 226/302 (74%), Gaps = 1/302 (0%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E S DK L+M EE+ D L+ + +LLPKD+AD
Sbjct: 50 IKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEAD 109
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+E+RAGTGGEEA+LFA +F MY+RY++ KGW+FE++ + E+ + GYKE SA+I
Sbjct: 110 SKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIK 169
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+ ++VD++L +DLRIDTYR
Sbjct: 170 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYR 229
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 230 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQ 289
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R EQIGSGDRSERIRTYNFPQGRV+DHR+ +T + I +++ G+ LD FI+AL+
Sbjct: 290 ERANNRREQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVINGQ-LDEFIEALIAN 348
Query: 304 QE 305
E
Sbjct: 349 DE 350
>sp|A8GNQ4|RF1_RICAH Peptide chain release factor 1 OS=Rickettsia akari (strain
Hartford) GN=prfA PE=3 SV=1
Length = 355
Score = 351 bits (900), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 162/302 (53%), Positives = 227/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L M +E+ + + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLELGFDNATLAMIEDEIHILENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRNKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R QIGSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD FI+AL+ +
Sbjct: 287 ERADSRRGQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFIEALIAE 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|Q1RJT5|RF1_RICBR Peptide chain release factor 1 OS=Rickettsia bellii (strain
RML369-C) GN=prfA PE=3 SV=1
Length = 357
Score = 351 bits (900), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 165/302 (54%), Positives = 226/302 (74%), Gaps = 1/302 (0%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E S DK L+M EE+ D L+ + +LLPKD+AD
Sbjct: 50 IKEYNKAKAELEEANNFKQEPSLDKATLEMIEEEIRNLEDSLPTLERSVKIALLPKDEAD 109
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+E+RAGTGGEEA+LFA +F MY+RY++ KGW+FE++ + E+ + GYKE SA+I
Sbjct: 110 SKSAIIEIRAGTGGEEAALFAAKLFNMYQRYAELKGWRFEILSIDETGIGGYKEVSASIK 169
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+ ++VD++L +DLRIDTYR
Sbjct: 170 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEVEDVDIKLEEKDLRIDTYR 229
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 230 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKDQ 289
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R +QIGSGDRSERIRTYNFPQGRV+DHR+ +T + I +++ G+ LD FI+AL+
Sbjct: 290 ERANNRRKQIGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVINGQ-LDEFIEALIAN 348
Query: 304 QE 305
E
Sbjct: 349 DE 350
>sp|A8GSC7|RF1_RICRS Peptide chain release factor 1 OS=Rickettsia rickettsii (strain
Sheila Smith) GN=prfA PE=3 SV=1
Length = 355
Score = 349 bits (896), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 228/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
+R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ARADSRRGQVGSGDRSERIRTYNFPQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|B0BXT9|RF1_RICRO Peptide chain release factor 1 OS=Rickettsia rickettsii (strain
Iowa) GN=prfA PE=3 SV=1
Length = 355
Score = 349 bits (896), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 228/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
+R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ARADSRRGQVGSGDRSERIRTYNFPQGRVSDHRIHLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|Q2RWE1|RF1_RHORT Peptide chain release factor 1 OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=prfA PE=3 SV=1
Length = 354
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 168/310 (54%), Positives = 231/310 (74%), Gaps = 4/310 (1%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I L + E+ G ++L+ +D DM D+A EE+ E L+ + LLP+D+AD
Sbjct: 48 IGRLDDAKAELAGARALL----DDPDMRDLAREEVLRLEAEIPALEHGVKLLLLPRDEAD 103
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+R ILEVRAGTGG+EA+LFA D+ +MYERY+Q++GW+FEV+ +++D+ G KEASAAIS
Sbjct: 104 DRGVILEVRAGTGGDEAALFAGDLLRMYERYAQERGWRFEVMEASDTDIGGIKEASAAIS 163
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G GV+ +LKFESG+HRVQRVP+TE GR+HTSA +VA+LP+A+EVDV + +DLRIDTYR
Sbjct: 164 GRGVFARLKFESGVHRVQRVPVTEGGGRIHTSAATVAVLPEAEEVDVEIEEKDLRIDTYR 223
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
S G+GGQH NTT+SAVR+TH+P+G+ QDE+SQH NKAKA+++L KLY+ R
Sbjct: 224 SQGAGGQHVNTTDSAVRITHLPSGVVAQCQDEKSQHKNKAKAMRMLRTKLYDHARQTADD 283
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
+R++ R Q+GSGDRSERIRTYNFPQGRVTDHR+G+T H + +++ G LD I+ L+ +
Sbjct: 284 ARAEARRVQVGSGDRSERIRTYNFPQGRVTDHRIGLTLHRLPEVLAGTALDEVIEPLIAE 343
Query: 304 QEMDAIASFG 313
+ +A G
Sbjct: 344 DQATRMAEIG 353
>sp|Q73IC2|RF1_WOLPM Peptide chain release factor 1 OS=Wolbachia pipientis wMel GN=prfA
PE=3 SV=1
Length = 359
Score = 348 bits (892), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/316 (52%), Positives = 233/316 (73%), Gaps = 11/316 (3%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK------RLQSLLLK 54
+ +I E T ++EI L+ ++ + + + D+ ++A EE EK ++++ L
Sbjct: 46 IKIIDEYNTLKEEISDLEEIMKDENSEGDIKELAKEEFF-----EKHKVLLPKIKAKLKL 100
Query: 55 SLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRG 114
+LLPKD+ D R+ ILE+RAGTGGEEA+LFA +F+MY++Y++++ WKFE + ++ + + G
Sbjct: 101 ALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGG 160
Query: 115 YKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRN 174
YKEASA I+G V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++
Sbjct: 161 YKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEE 220
Query: 175 EDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLY 234
+DLRID YRS G GGQ NTT+SAVRVTH+PTG+ + QDE+SQH NKAKALKVL A+LY
Sbjct: 221 KDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLY 280
Query: 235 EMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLD 294
E+ER + + RS +R QIGSGDRSERIRTYNFPQ R+TDHR+ +T H + +++ LD
Sbjct: 281 EIERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELD 340
Query: 295 IFIDALLLQQEMDAIA 310
FI+AL+ + E + +A
Sbjct: 341 EFIEALISRNEAERLA 356
>sp|B3CL87|RF1_WOLPP Peptide chain release factor 1 OS=Wolbachia pipientis subsp. Culex
pipiens (strain wPip) GN=prfA PE=3 SV=1
Length = 363
Score = 348 bits (892), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/318 (51%), Positives = 236/318 (74%), Gaps = 7/318 (2%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
+ +I E ++EI L+ ++ + + D D+ ++A EEL ++++K ++++ L +L
Sbjct: 46 IEIIDEYNILKEEISDLEEIMKDENSDGDIKELAKEEL---LEKQKIVLPKVKAKLKLAL 102
Query: 57 LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
LPKD+ D R+ ILE+RAGTGGEEA+LFA +F+MY++Y++++ WKFE + ++ + + GYK
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISNTGIGGYK 162
Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
EASA I+G V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD + +D
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFEIEEKD 222
Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
LRID YRS G GGQ NTT+SAVRVTH+PTG+ + QDE+SQH NKAKALKVL A+LYE+
Sbjct: 223 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTGIVVIQQDEKSQHKNKAKALKVLRARLYEI 282
Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
ER + + RS +R QIGSGDRSERIRTYNFPQ R+TDHR+ +T H + +++ LD F
Sbjct: 283 ERQKKEMERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHRLEQIIKEGELDEF 342
Query: 297 IDALLLQQEMDAIASFGS 314
I+AL+ + E + + G+
Sbjct: 343 IEALISRNEAERLTGGGN 360
>sp|Q5GSS8|RF1_WOLTR Peptide chain release factor 1 OS=Wolbachia sp. subsp. Brugia
malayi (strain TRS) GN=prfA PE=3 SV=1
Length = 359
Score = 347 bits (889), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 234/314 (74%), Gaps = 7/314 (2%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEK----RLQSLLLKSL 56
+ +I+E T +KEI L+ +I + + + D+ ++A EE +++K ++++ L +L
Sbjct: 46 IKIINEYDTLKKEILDLEEIIKDENSEYDIKELAKEEF---FEKQKVLLPQVKAKLKLAL 102
Query: 57 LPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYK 116
LPKD+ D R+ ILE+RAGTGGEEA+LFA +F+MY++Y++++ WKFE + ++ + + GYK
Sbjct: 103 LPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYK 162
Query: 117 EASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNED 176
EASA I+G V+ +LKFESG+HRVQRVP TE SGR+HTSA +VAILP+ +EVD ++ +D
Sbjct: 163 EASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKD 222
Query: 177 LRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEM 236
LRID YRS G GGQ NTT+SAVRVTH+PT M + QDE+SQH NKAKALKVL A+LYE+
Sbjct: 223 LRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEI 282
Query: 237 ERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIF 296
ER + + RS +R QIGSGDRSERIRTYNFPQ R+TDHR+ +T H + +++ LD F
Sbjct: 283 ERQKKEIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEF 342
Query: 297 IDALLLQQEMDAIA 310
I+ L+ + E + +A
Sbjct: 343 IEVLISRNEAERLA 356
>sp|B9JT13|RF1_AGRVS Peptide chain release factor 1 OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=prfA PE=3 SV=1
Length = 359
Score = 347 bits (889), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 171/313 (54%), Positives = 229/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL +KE+ LK+L+ + S D++M D+A EL D E RL+ L + LLPKD
Sbjct: 49 IRELGLAEKEVADLKALLADKSTDREMRDLAEMELP---DVEARLEGLEKEIQIQLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
ADE+ ILE+RAGTGG EA+LFA D+F+MYER++ KGWK EV+ +E D G+KE A
Sbjct: 106 AADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAGKGWKVEVLSSSEGDAGGFKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
++G GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+E+D+ +R ED+RID
Sbjct: 166 TVTGRGVFSKLKFESGVHRVQRVPDTETQGRIHTSAATVAVLPEAEEIDIEVRAEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T RS G+GGQH NTT+SAVR+TH+PTG+ ++ E+SQH N+AKA++VL ++L++MER R
Sbjct: 226 TMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHQNRAKAMQVLRSRLFDMERQR 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + MM GE +D +DAL
Sbjct: 285 ADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMMGE-IDEVVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 IADYQAGQLAQLG 356
>sp|Q8YJ95|RF1_BRUME Peptide chain release factor 1 OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=prfA PE=3 SV=2
Length = 359
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEGE LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|C0RFB5|RF1_BRUMB Peptide chain release factor 1 OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=prfA PE=3 SV=1
Length = 359
Score = 345 bits (886), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEGE LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|A8EYR1|RF1_RICCK Peptide chain release factor 1 OS=Rickettsia canadensis (strain
McKiel) GN=prfA PE=3 SV=1
Length = 355
Score = 345 bits (885), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 225/307 (73%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKD+AD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDEAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW FE++ + ++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAILFNMYQRYAELKGWHFEILAIVDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLK ESG+HRVQR+P TE GR+HTSA +VA+LP+ ++VD++L ++DLRIDTYR
Sbjct: 167 GKDVFSKLKCESGVHRVQRIPETESHGRIHTSAATVAVLPEVEDVDIKLEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
S G+GGQH NTTNSAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 SSGAGGQHVNTTNSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F+DAL+
Sbjct: 287 KRANNRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVDALIAD 346
Query: 304 QEMDAIA 310
E +A
Sbjct: 347 DEAKKLA 353
>sp|Q8FYK3|RF1_BRUSU Peptide chain release factor 1 OS=Brucella suis biovar 1 (strain
1330) GN=prfA PE=3 SV=1
Length = 359
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|A9M8K5|RF1_BRUC2 Peptide chain release factor 1 OS=Brucella canis (strain ATCC 23365
/ NCTC 10854) GN=prfA PE=3 SV=1
Length = 359
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|A6WXQ3|RF1_OCHA4 Peptide chain release factor 1 OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=prfA PE=3 SV=1
Length = 357
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL +KE L ++ + S D +M +A EEL EKR++ L + LLPKD
Sbjct: 49 IRELTDSRKEAVDLAAMRDDASTDAEMRALALEELPGV---EKRIEGLEQEVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
ADE++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADEKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 ADTERSESRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + + G
Sbjct: 344 ISDHQTALLTELG 356
>sp|Q57B22|RF1_BRUAB Peptide chain release factor 1 OS=Brucella abortus biovar 1 (strain
9-941) GN=prfA PE=3 SV=1
Length = 359
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|Q2YLN8|RF1_BRUA2 Peptide chain release factor 1 OS=Brucella abortus (strain 2308)
GN=prfA PE=3 SV=1
Length = 359
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|B2S825|RF1_BRUA1 Peptide chain release factor 1 OS=Brucella abortus (strain S19)
GN=prfA PE=3 SV=1
Length = 359
Score = 344 bits (883), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 230/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE A
Sbjct: 106 AADDKNAILEIRAGTGGLEATLFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|Q92MK5|RF1_RHIME Peptide chain release factor 1 OS=Rhizobium meliloti (strain 1021)
GN=prfA PE=3 SV=1
Length = 360
Score = 343 bits (881), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 167/317 (52%), Positives = 232/317 (73%), Gaps = 5/317 (1%)
Query: 3 LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
++S++R +K E+ + +++ + + DKDM D+A E ++ + L+ + LLPK
Sbjct: 45 VVSKIRAYEKATAELADIAAMLADRATDKDMRDLAEMEKPEVEEKIEALEQEIQILLLPK 104
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D ADE+ ILE+RAGTGG EA+LFA D+F+MYERY+ KGW+ EV+ +E + GYKE
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAASKGWRVEVLSASEGEAGGYKEII 164
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
A +SG GV+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R+
Sbjct: 165 ATVSGRGVFSRLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEIDIDVRPEDIRV 224
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
DT RS G+GGQH NTT+SAVR+THIPTG+ ++ E+SQH N+AKA++VL ++LY+MER
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHIPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDMERQ 283
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R RS R Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + + MMEGE +D +DA
Sbjct: 284 RADSERSADRRSQVGSGDRSERIRTYNFPQGRLTDHRINLTLYKLDRMMEGE-IDDVVDA 342
Query: 300 LLLQQEMDAIASFGSTQ 316
LL + +A G Q
Sbjct: 343 LLADYQASQLALLGERQ 359
>sp|Q2W6V3|RF1_MAGSA Peptide chain release factor 1 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=prfA PE=3 SV=1
Length = 354
Score = 343 bits (879), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 163/288 (56%), Positives = 213/288 (73%)
Query: 23 ECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASL 82
E D DM D+A EE + L+ + LLPKD+ADE++ I+EVRAGTGGEEA+L
Sbjct: 64 EMMNDPDMKDLAEEEFYALKERLPALEREVQIMLLPKDEADEKNAIIEVRAGTGGEEAAL 123
Query: 83 FAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQR 142
FA ++F+MYERY+ GW+FEV+ V ++ + G KEASA I+G V+ +LKFESG+HRVQR
Sbjct: 124 FAAELFRMYERYAGLHGWRFEVMDVNDTGIGGVKEASATITGRNVFARLKFESGVHRVQR 183
Query: 143 VPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVT 202
VP TE GR+HTSA +VAI+P+A+EVD++L + DLR D YRS GSGGQ NTT+SAVRVT
Sbjct: 184 VPATESQGRIHTSAATVAIMPEAEEVDIQLNDSDLRFDVYRSQGSGGQSVNTTDSAVRVT 243
Query: 203 HIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERI 262
HIPTG+ ++ Q E+SQH NKA ALK+L A+LYE ERS R+ R Q+GSGDRSERI
Sbjct: 244 HIPTGLAVACQQEKSQHKNKATALKLLRARLYERERSAKDAERAAARKSQVGSGDRSERI 303
Query: 263 RTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIA 310
RTYNFPQGRVTDHR+ +T + I +M G+ LD ++AL+ + + +A
Sbjct: 304 RTYNFPQGRVTDHRINMTLYKIDAVMSGDALDELVEALVAADQAERLA 351
>sp|Q9ZD21|RF1_RICPR Peptide chain release factor 1 OS=Rickettsia prowazekii (strain
Madrid E) GN=prfA PE=3 SV=1
Length = 355
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 226/302 (74%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I + + E++ + E + D L+M E+ + +L+ + SLLPKD+AD
Sbjct: 47 IKQYNKAKSELEEANNFRLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RYS+ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQR+P TE GR+HTSA +VA+LP+A+ +D+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRIPETESQGRIHTSAATVAVLPEAEGIDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A+LYE +R +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
RS R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD FI+AL+
Sbjct: 287 ERSDSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIAN 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|B0CIC3|RF1_BRUSI Peptide chain release factor 1 OS=Brucella suis (strain ATCC 23445
/ NCTC 10510) GN=prfA PE=3 SV=1
Length = 359
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 167/313 (53%), Positives = 229/313 (73%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I EL + E L ++ + S D +M +A EEL + EKR+ L + LLPKD
Sbjct: 49 IRELSDARMEASDLAAMRDDASTDAEMRALAVEELP---EVEKRIAVLEQDVQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG EA+LFA D+F+MYERY+ +KGW+ E+V +E D GYKE
Sbjct: 106 AADDKNAILEIRAGTGGLEAALFAGDLFRMYERYAAEKGWRVELVSASEGDAGGYKEIIT 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +RNED+RID
Sbjct: 166 TVSGKGVFSKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIEIRNEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+A+++L A+LY+MER +
Sbjct: 226 TMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARAMQILRARLYDMERQK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD +DAL
Sbjct: 285 AESERSQARRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEG-DLDELVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 ISDHQTALLAELG 356
>sp|Q2GBN7|RF1_NOVAD Peptide chain release factor 1 OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=prfA PE=3 SV=1
Length = 354
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 159/307 (51%), Positives = 223/307 (72%), Gaps = 5/307 (1%)
Query: 6 ELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADER 65
E+R + E+ L +L +D DM ++A EEL E + L ++LP+D AD R
Sbjct: 51 EVREMRGELVSLAAL-----DDPDMRELADEELARIRAELPEAEHRLAVAMLPRDSADAR 105
Query: 66 DCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGV 125
+LE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+ E + V +DL GYKE A ++G
Sbjct: 106 PAMLEIRAGTGGDEAALFAADLFRMYERYAAEQGWRVETISVNANDLGGYKEVVANVAGQ 165
Query: 126 GVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSG 185
GV+ KLKFESG+HRVQRVP+TE GR+HTSA +VA+LP+ DEVDV + ++DL+ID YR+
Sbjct: 166 GVFAKLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEPDEVDVAIEDKDLKIDIYRAS 225
Query: 186 GSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSR 245
G+GGQH NTT+SAVR+TH+P+G+ ++ QDERSQH NKAKA++VL +LY+M R +
Sbjct: 226 GAGGQHVNTTDSAVRITHLPSGLVVTCQDERSQHKNKAKAMQVLRTRLYDMRREAAQGAE 285
Query: 246 SKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQE 305
++ R +GSGDRSERIRTYNFPQGRVTDHR+ +T H + +++EG L IDAL+ + +
Sbjct: 286 AEARKAMVGSGDRSERIRTYNFPQGRVTDHRINLTLHRLPEILEGPGLAELIDALIAEDQ 345
Query: 306 MDAIASF 312
+A+
Sbjct: 346 SKRLAAM 352
>sp|Q5PAH2|RF1_ANAMM Peptide chain release factor 1 OS=Anaplasma marginale (strain St.
Maries) GN=prfA PE=3 SV=1
Length = 359
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/314 (52%), Positives = 225/314 (71%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
M LI E +T QKEI+ L+ LI D +++ +A EEL +L+ L SLLPKD
Sbjct: 46 MSLIEEYQTAQKEIEELEGLINSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D R ILE+RAGTGGEEA+LF D+++MY +Y+++K WK E +G++ + + GYKEAS
Sbjct: 106 KDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASL 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
I G V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++ +DLRID
Sbjct: 166 CIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
YRS G GGQ NTT+SAVR+THIPTG+ + QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
I SK+R QIGSGDRSERIRTYNF Q R+TDHR+ +T + + +M+ +LD F+DAL
Sbjct: 286 IEDEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDAL 345
Query: 301 LLQQEMDAIASFGS 314
+ + + + S
Sbjct: 346 IADDQANKLQQISS 359
>sp|B9KIV2|RF1_ANAMF Peptide chain release factor 1 OS=Anaplasma marginale (strain
Florida) GN=prfA PE=3 SV=1
Length = 359
Score = 342 bits (878), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/314 (52%), Positives = 225/314 (71%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
M LI E +T QKEI+ L+ LI D +++ +A EEL +L+ L SLLPKD
Sbjct: 46 MSLIEEYQTAQKEIEELEGLINSTDTDAELVHLAREELYTKQKLIPKLKHQLQLSLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D R ILE+RAGTGGEEA+LF D+++MY +Y+++K WK E +G++ + + GYKEAS
Sbjct: 106 KDDSRSAILEIRAGTGGEEAALFVCDLYRMYIKYAERKSWKVEPIGISTTGIGGYKEASL 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
I G V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++ +DLRID
Sbjct: 166 CIGGKDVFARLKFESGVHRVQRVPETESSGRLHTSAATVAVLPEVEEVDLKIDEKDLRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
YRS G GGQ NTT+SAVR+THIPTG+ + QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPTGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
I SK+R QIGSGDRSERIRTYNF Q R+TDHR+ +T + + +M+ +LD F+DAL
Sbjct: 286 IEDEISKMRKSQIGSGDRSERIRTYNFLQSRITDHRINMTLYRLEHIMKEGDLDEFVDAL 345
Query: 301 LLQQEMDAIASFGS 314
+ + + + S
Sbjct: 346 IADDQANKLQQISS 359
>sp|B5ZRR4|RF1_RHILW Peptide chain release factor 1 OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=prfA PE=3 SV=1
Length = 359
Score = 342 bits (877), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 233/317 (73%), Gaps = 5/317 (1%)
Query: 3 LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
+++++R +K E+ L++L+ + S D++M D+A EL ++ + L+ + LLPK
Sbjct: 45 VVTKIRAYEKAIAELADLETLLEDKSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D ADE+ ILE+RAGTGG EA+LFA D+F+MYER+S +KGWK EV+ +E + GYKE
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFSAEKGWKVEVLSASEGEAGGYKEII 164
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
A I+G GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
DT RS G+GGQH NTT+SAVR+TH+P+G+ ++ E+SQH N+AKA++VL ++LY+ ER
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R RS R Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + + MMEGE ++ +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYKLDRMMEGE-IEEVVDA 342
Query: 300 LLLQQEMDAIASFGSTQ 316
L+ + +A G Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359
>sp|Q98G93|RF1_RHILO Peptide chain release factor 1 OS=Rhizobium loti (strain
MAFF303099) GN=prfA PE=3 SV=1
Length = 359
Score = 342 bits (877), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 164/313 (52%), Positives = 234/313 (74%), Gaps = 8/313 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
+ +LR+ + E L++++ + D +M +A +L D E+R+++L + LLPKD
Sbjct: 49 VRQLRSAEHEQADLEAMLADKGTDAEMRALAEADLP---DVEERIEALQKDIQILLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
AD+++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+FE V ++ D G+KE A
Sbjct: 106 AADDKNAILEIRAGTGGDEAALFAGDLFRMYERYAAERGWRFETVSASDGDAGGFKEIIA 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
+SG GV+ LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+EVD+ +R ED+RID
Sbjct: 166 TVSGKGVFAHLKFESGVHRVQRVPATEASGRIHTSAATVAVLPEAEEVDIEIRAEDIRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ GSGGQH NTT+SAVR+TH+PTG+ + +Q E+SQH N+AKA+++L A+LY++ERS+
Sbjct: 226 TMRASGSGGQHVNTTDSAVRITHLPTGIMV-VQAEKSQHQNRAKAMQILRARLYDLERSK 284
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
RS+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +M GE LD +DAL
Sbjct: 285 ADEERSESRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMMGE-LDEIVDAL 343
Query: 301 LLQQEMDAIASFG 313
+ + +A G
Sbjct: 344 IADHQSKLLADIG 356
>sp|Q1MBB2|RF1_RHIL3 Peptide chain release factor 1 OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=prfA PE=3 SV=1
Length = 359
Score = 342 bits (876), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 233/317 (73%), Gaps = 5/317 (1%)
Query: 3 LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
+++++R +K E+ L++L+ + S D++M D+A EL ++ + L+ + LLPK
Sbjct: 45 VVTKIRVYEKAVTELADLETLLEDRSVDREMRDLAELELPEVKEQIEALEQEMQILLLPK 104
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D ADE+ ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+ +E + GYKE
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAAEKGWKVEVLSASEGEAGGYKEII 164
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
A I+G GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGKGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRAEDIRI 224
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
DT RS G+GGQH NTT+SAVR+TH+P+G+ ++ E+SQH N+AKA++VL ++LY+ ER
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPSGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R RS R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + MMEGE ++ +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342
Query: 300 LLLQQEMDAIASFGSTQ 316
L+ + +A G Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359
>sp|Q1GPK3|RF1_SPHAL Peptide chain release factor 1 OS=Sphingopyxis alaskensis (strain
DSM 13593 / LMG 18877 / RB2256) GN=prfA PE=3 SV=1
Length = 355
Score = 342 bits (876), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 155/293 (52%), Positives = 215/293 (73%), Gaps = 1/293 (0%)
Query: 21 IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEA 80
+ E D +M MA EE+ + L LLPKD AD R +LE+RAGTGG+EA
Sbjct: 63 LNEMLADPEMKAMAVEEIAAVEAALPAAEHDLALQLLPKDVADSRAAMLEIRAGTGGDEA 122
Query: 81 SLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRV 140
+LFA D+ +MY RY+ +GWK E++ E+++ GYKE A++SG GV+ KLKFESG+HRV
Sbjct: 123 ALFAGDLLRMYSRYADTQGWKVEIISANEAEVGGYKEVVASVSGQGVFAKLKFESGVHRV 182
Query: 141 QRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVR 200
QRVP+TE GR+HTSA +VA+LP+A+EVDV + + DL+ID YR+ G+GGQH NTT+SA+R
Sbjct: 183 QRVPVTESGGRIHTSAATVAVLPEAEEVDVAINDSDLKIDIYRASGAGGQHVNTTDSAIR 242
Query: 201 VTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSE 260
+THIPTG+ + QD+RSQH N+AKA++VL A+LY++ER ++H + + R +GSGDRSE
Sbjct: 243 ITHIPTGLVVIQQDQRSQHKNRAKAMQVLRARLYDLEREKLHSAEASARKSMVGSGDRSE 302
Query: 261 RIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFG 313
RIRTYNFPQGRVTDHR+ +T H + +++EG +D IDAL+ + + +A G
Sbjct: 303 RIRTYNFPQGRVTDHRINLTLHRLPEILEG-AMDELIDALIAEDQAQRLAGLG 354
>sp|Q68WK7|RF1_RICTY Peptide chain release factor 1 OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=prfA PE=3 SV=1
Length = 355
Score = 341 bits (875), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/302 (53%), Positives = 225/302 (74%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ +L E + D L+M E+ + + +L+ + SLLPKD+AD
Sbjct: 47 IKEYNKVKSELEEANNLRLEVALDNATLEMINNEIYILENLLPKLERAVRISLLPKDEAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++ + + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAEFKGWRFEILAISNTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+ VD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEGVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
S G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A+LYE +R +
Sbjct: 227 SSGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
RS R Q+GSGDRSERIRTYNF GRV+DHR+ +T + I ++++ LD FI+AL+
Sbjct: 287 ERSDSRRWQVGSGDRSERIRTYNFLHGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIAN 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|Q2K3T1|RF1_RHIEC Peptide chain release factor 1 OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=prfA PE=3 SV=2
Length = 359
Score = 341 bits (874), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 166/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)
Query: 3 LISELRTKQK---EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
+++++R +K E+ L++L+ + S D++M D+A EL + L+ + LLPK
Sbjct: 45 VVTKIRAYEKAVAELADLETLLEDKSVDREMRDLAELELPEVRARIEALEQEMQILLLPK 104
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D ADE+ ILE+RAGTGG EA+LFA D+F+MYER++ +KGWK EV+ +E + GYKE
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFASEKGWKVEVLSASEGEAGGYKEII 164
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
A I+G GV+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+E+D+ +R ED+RI
Sbjct: 165 ATITGRGVFAKLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEEIDIEIRPEDIRI 224
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
DT RS G+GGQH NTT+SAVR+TH+PTG+ ++ E+SQH N+AKA++VL ++LY+ ER
Sbjct: 225 DTMRSSGAGGQHVNTTDSAVRITHLPTGIVVT-SSEKSQHQNRAKAMQVLRSRLYDAERQ 283
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R RS R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + MMEGE ++ +DA
Sbjct: 284 RADSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRMMEGE-IEEVVDA 342
Query: 300 LLLQQEMDAIASFGSTQ 316
L+ + +A G Q
Sbjct: 343 LMADYQASQLAQLGEQQ 359
>sp|C4K0C9|RF1_RICPU Peptide chain release factor 1 OS=Rickettsia peacockii (strain
Rustic) GN=prfA PE=3 SV=1
Length = 355
Score = 341 bits (874), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 227/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|Q8U8B8|RF1_AGRT5 Peptide chain release factor 1 OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=prfA PE=3 SV=1
Length = 360
Score = 340 bits (873), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/317 (52%), Positives = 231/317 (72%), Gaps = 5/317 (1%)
Query: 3 LISELRTKQKEID---GLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPK 59
++ ++R +K I L++L+ + + DKDM D+A EL + L+ + LLPK
Sbjct: 45 VVKKIRDYEKAISEAADLEALLADKTTDKDMRDLAEMELPEVETRIRELEKDMQVLLLPK 104
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D ADE+ ILE+RAGTGG EA+LFA D+F+MYER++ KGWK EV+ +E + GYKE
Sbjct: 105 DAADEKSAILEIRAGTGGSEAALFAGDLFRMYERFAATKGWKVEVLSASEGEAGGYKEII 164
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
A I+G GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+++DV +R ED+RI
Sbjct: 165 ATITGRGVFSKLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEDIDVEIRPEDIRI 224
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
DT R+ G+GGQH NTT+SAVR+TH+PTG+ ++ E+SQH N+AKA++VL ++LY++ER
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGLIVT-SSEKSQHQNRAKAMQVLRSRLYDIERQ 283
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
++ RS R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++EGE +D +DA
Sbjct: 284 KVDSERSADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVIEGE-IDELVDA 342
Query: 300 LLLQQEMDAIASFGSTQ 316
L+ + +A G Q
Sbjct: 343 LIADYQAGQLAQLGEQQ 359
>sp|Q4ULG0|RF1_RICFE Peptide chain release factor 1 OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=prfA PE=3 SV=1
Length = 355
Score = 340 bits (873), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 227/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|A8F1S1|RF1_RICM5 Peptide chain release factor 1 OS=Rickettsia massiliae (strain
Mtu5) GN=prfA PE=3 SV=1
Length = 361
Score = 340 bits (873), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 227/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIHTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIQIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|A1URS5|RF1_BARBK Peptide chain release factor 1 OS=Bartonella bacilliformis (strain
ATCC 35685 / KC583) GN=prfA PE=3 SV=1
Length = 359
Score = 340 bits (871), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 162/303 (53%), Positives = 226/303 (74%), Gaps = 5/303 (1%)
Query: 2 HLISELRTKQ---KEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLP 58
+++ +RT KE+ L+++ D DM +A EEL L + ++L+ + LLP
Sbjct: 44 QIVTPIRTLNALYKEVTELEAMANTTQIDADMYALAQEELVLLRQKIEQLEQEIQILLLP 103
Query: 59 KDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEA 118
KD ADE+ I+E+RAGTGG EA+LFA D+F+MYERY+ WK EVV +++S++ GYKE
Sbjct: 104 KDIADEKSAIIEIRAGTGGSEAALFAGDLFRMYERYANAHKWKVEVVSLSDSEVGGYKEI 163
Query: 119 SAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLR 178
A ISG GV+ KLKFESG+HRVQRVP TE SGR+HTSA +VA+LP+A+E+D+ +R ED+R
Sbjct: 164 IATISGKGVFSKLKFESGVHRVQRVPETETSGRIHTSAATVAVLPEAEEIDIEIRPEDIR 223
Query: 179 IDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMER 238
IDT R+ G+GGQH NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L ++L+++ER
Sbjct: 224 IDTMRASGAGGQHVNTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRSRLFDIER 282
Query: 239 SRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFID 298
+ RS R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + +MEG +LD I+
Sbjct: 283 QKAESERSASRKTQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRIMEG-DLDELIN 341
Query: 299 ALL 301
L+
Sbjct: 342 PLI 344
>sp|Q92HK9|RF1_RICCN Peptide chain release factor 1 OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=prfA PE=3 SV=1
Length = 355
Score = 340 bits (871), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 160/302 (52%), Positives = 226/302 (74%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWHFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R Q+GSGDRSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ERADSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|C3PNN0|RF1_RICAE Peptide chain release factor 1 OS=Rickettsia africae (strain ESF-5)
GN=prfA PE=3 SV=1
Length = 355
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 159/302 (52%), Positives = 227/302 (75%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDAD 63
I E + E++ + E D L+M +E+ + +L+ + +LLPKDDAD
Sbjct: 47 IKEYNKAKSELEEANNFKLEVGLDNATLEMIEDEIYTLENSLPKLERAVKIALLPKDDAD 106
Query: 64 ERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAIS 123
+ I+EVRAG+GGEEA+LFA +F MY+RY++ KGW+FE++ ++++ + GYKEASA+I
Sbjct: 107 SKSAIIEVRAGSGGEEAALFAAVLFNMYQRYAELKGWRFEILAISDTGIGGYKEASASIK 166
Query: 124 GVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYR 183
G V+ KLKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+EVD+++ ++DLRIDTYR
Sbjct: 167 GKDVFSKLKFESGVHRVQRVPETESQGRIHTSAATVAVLPEAEEVDIKIEDKDLRIDTYR 226
Query: 184 SGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHL 243
+ G+GGQH NTT+SAVR+THIPTG+T+++QDE+SQH NKAKALK+L A++YE ER +
Sbjct: 227 ASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARIYEEERRKKEQ 286
Query: 244 SRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQ 303
R+ R Q+GSG+RSERIRTYNFPQGRV+DHR+ +T + I ++++ LD F++AL+
Sbjct: 287 ERADSRRGQVGSGNRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKNGQLDEFVEALIAD 346
Query: 304 QE 305
E
Sbjct: 347 DE 348
>sp|Q3SVP7|RF1_NITWN Peptide chain release factor 1 OS=Nitrobacter winogradskyi (strain
Nb-255 / ATCC 25391) GN=prfA PE=3 SV=1
Length = 358
Score = 338 bits (868), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/311 (51%), Positives = 224/311 (72%), Gaps = 2/311 (0%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMA-TEELCLAIDEEKRLQSLLLKSLLPKDDA 62
+ R EI G+ ++I + + D +M MA E L ++ +Q + + +LLPKD
Sbjct: 47 VKNWRAVTAEIAGIDAMIADPATDAEMRAMAEAERPALEARNDELMQKIRV-ALLPKDAM 105
Query: 63 DERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAI 122
DER+ +LEVRAGTGG+EASLFA D+F+MYER++ +GWK EV+ +E + GYKE A +
Sbjct: 106 DERNVMLEVRAGTGGDEASLFAGDLFRMYERFAALQGWKVEVISASEGTMGGYKEIVAQV 165
Query: 123 SGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTY 182
G G Y ++KFESG+HRVQRVP TE GRVHTSA +VA+LP+A+EVDV +R +DLRI+T
Sbjct: 166 QGRGAYARMKFESGVHRVQRVPDTEAQGRVHTSAATVAVLPEAEEVDVDIRPDDLRIETM 225
Query: 183 RSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIH 242
R+ G+GGQH N T SA+R+THIPTG+ +S+QD RSQH N+A A+ +L +++Y+ ER RI+
Sbjct: 226 RAQGAGGQHVNKTESAIRITHIPTGIVVSMQDSRSQHKNRASAMNILRSRIYDAERQRIN 285
Query: 243 LSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLL 302
+RS R +Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++ G+ L IDAL
Sbjct: 286 AARSADRKDQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGDALHELIDALTT 345
Query: 303 QQEMDAIASFG 313
+ + +A+ G
Sbjct: 346 EHQAAQLAAEG 356
>sp|Q11E04|RF1_MESSB Peptide chain release factor 1 OS=Mesorhizobium sp. (strain BNC1)
GN=prfA PE=3 SV=1
Length = 359
Score = 338 bits (868), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 163/315 (51%), Positives = 240/315 (76%), Gaps = 10/315 (3%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMAT---EELCLAI-DEEKRLQSLLLKSLLPK 59
I LR + E++ L +++ + S D+++ ++A EE+ + D +++LQ LLL PK
Sbjct: 49 IRALRKAEAELEDLDTMLADKSIDREIRELAEIDREEVESRVEDMQQKLQVLLL----PK 104
Query: 60 DDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEAS 119
D+ADE++ ILE+RAGTGG+EA+LFA D+F+MYERY+ ++GW+ EVV +E + GYKE
Sbjct: 105 DEADEKNAILEIRAGTGGDEAALFAGDLFRMYERYASERGWRVEVVSASEGEAGGYKEII 164
Query: 120 AAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRI 179
A+++G GV+ +LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++DV ++ ED+RI
Sbjct: 165 ASVTGRGVFSRLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEDIDVDIKPEDIRI 224
Query: 180 DTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERS 239
DT R+ G+GGQH NTT+SAVR+TH+PTG+ + + E+SQH N+A+A+++L A+L++MERS
Sbjct: 225 DTMRASGAGGQHVNTTDSAVRITHLPTGIMV-VSAEKSQHQNRARAMQILRARLFDMERS 283
Query: 240 RIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDA 299
R RS+ R Q+G+GDRSERIRTYNFPQGRVTDHR+ +T + + +MEGE LD IDA
Sbjct: 284 RAANERSEARRLQVGTGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVMEGE-LDEVIDA 342
Query: 300 LLLQQEMDAIASFGS 314
L+ + +A+ G+
Sbjct: 343 LIADHQSKLLAAEGA 357
>sp|Q5NMC7|RF1_ZYMMO Peptide chain release factor 1 OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=prfA PE=3 SV=1
Length = 358
Score = 338 bits (868), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 158/287 (55%), Positives = 211/287 (73%)
Query: 26 EDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAGTGGEEASLFAV 85
+D ++ MA EEL + L SLLP+D ADER ILE+RAGTGG+EA+LF
Sbjct: 70 DDPELQAMAVEELEANKTALAEAERALALSLLPRDAADERSAILEIRAGTGGDEAALFGG 129
Query: 86 DVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFESGIHRVQRVPL 145
D+ +MY RY+++ GW+ E++ + ++L GYKE +I+G GV+ +LKFESG+HRVQRVP+
Sbjct: 130 DLLRMYSRYAEEHGWRVEMISASAAELGGYKEVVISITGAGVFARLKFESGVHRVQRVPV 189
Query: 146 TEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANTTNSAVRVTHIP 205
TE GR+HTSA +VA+LP+A+EVDV + DLRID +RS G GGQ NTT+SAVR+THIP
Sbjct: 190 TESGGRIHTSAATVAVLPEAEEVDVDIDERDLRIDIFRSSGPGGQSVNTTDSAVRITHIP 249
Query: 206 TGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIGSGDRSERIRTY 265
+G+ +S QDE+SQH NKAKA+KVL A+LYE ER R+H R+ R +GSGDRSERIRTY
Sbjct: 250 SGIVVSQQDEKSQHKNKAKAMKVLRARLYERERERLHSERAGQRKSMVGSGDRSERIRTY 309
Query: 266 NFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASF 312
NFPQGRVTDHR+ +T H + +++ G LD I AL+ + E + +AS
Sbjct: 310 NFPQGRVTDHRINLTLHRLPEILAGPGLDEVISALIAEDEAERLASL 356
>sp|A6UCF2|RF1_SINMW Peptide chain release factor 1 OS=Sinorhizobium medicae (strain
WSM419) GN=prfA PE=3 SV=1
Length = 360
Score = 338 bits (866), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 235/323 (72%), Gaps = 17/323 (5%)
Query: 3 LISELRTKQK---EIDGLKSLIYECSEDKDMLDMA------TEELCLAIDEEKRLQSLLL 53
++S++R +K E+ + +++ + + DKDM D+A EE A+++E +Q LLL
Sbjct: 45 VVSKIRAYEKATAELADIGAMLADRATDKDMRDLAELEKPEIEERVEALEQE--IQILLL 102
Query: 54 KSLLPKDDADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLR 113
PKD ADE+ ILE+RAGTGG EA+LFA D+F+MYERY+ KGW+ EV+ +E +
Sbjct: 103 ----PKDAADEKSAILEIRAGTGGSEAALFAGDLFRMYERYAAGKGWRVEVLSASEGEAG 158
Query: 114 GYKEASAAISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLR 173
GYKE A +SG GV+ +LKFESG+HRVQRVP TE GR+HTSA +VA+LP+A+++D+ +R
Sbjct: 159 GYKEIIATVSGRGVFSRLKFESGVHRVQRVPETEAGGRIHTSAATVAVLPEAEDIDIDIR 218
Query: 174 NEDLRIDTYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKL 233
+ED+R+DT RS G+GGQH NTT+SAVR+TH+PTG+ ++ E+SQH N+AKA++VL ++L
Sbjct: 219 SEDIRVDTMRSSGAGGQHVNTTDSAVRITHLPTGLVVT-SSEKSQHQNRAKAMQVLRSRL 277
Query: 234 YEMERSRIHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENL 293
Y+MER R RS R Q+GSGDRSERIRTYNFPQGR+TDHR+ +T + + +MEGE +
Sbjct: 278 YDMERQRADSERSADRRNQVGSGDRSERIRTYNFPQGRLTDHRINLTIYKLDRVMEGE-I 336
Query: 294 DIFIDALLLQQEMDAIASFGSTQ 316
D +DALL + +A G Q
Sbjct: 337 DEIVDALLADYQASQLALLGEKQ 359
>sp|B8EI32|RF1_METSB Peptide chain release factor 1 OS=Methylocella silvestris (strain
BL2 / DSM 15510 / NCIMB 13906) GN=prfA PE=3 SV=1
Length = 360
Score = 338 bits (866), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 160/300 (53%), Positives = 221/300 (73%), Gaps = 6/300 (2%)
Query: 4 ISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSL---LLKSLLPKD 60
I + R++ +E++GL +++ + + D +M +A EEL D ++RL++L L +LLPKD
Sbjct: 47 IRDYRSQMQEVEGLAAMLADPTTDSEMRGLAEEELR---DAKERLEALEHQLKIALLPKD 103
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
ADER ILEVRAGTGG+EA+LFA D+F+MY+RY++ KGW E++ E G+KE A
Sbjct: 104 AADERSAILEVRAGTGGDEAALFAGDLFRMYQRYAESKGWSVEIISANEGAAGGFKEIIA 163
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
I+G GV+ KLKFESG HRVQRVP TE GR+HTSA +VA+LP+A EVDV + DL+ID
Sbjct: 164 EIAGRGVFAKLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAQEVDVEINEADLKID 223
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
T R+ G+GGQH N T SA+R+THIPTG + +QDERSQH N+A+A+ +L +++Y+ +R +
Sbjct: 224 TMRAQGAGGQHVNKTESAIRITHIPTGTIVFVQDERSQHKNRARAMALLRSRIYDEQRQK 283
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
+ R+ R Q+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++ GE LD IDAL
Sbjct: 284 LDAERAADRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDKVITGEALDEVIDAL 343
>sp|Q2GGM5|RF1_EHRCR Peptide chain release factor 1 OS=Ehrlichia chaffeensis (strain
Arkansas) GN=prfA PE=3 SV=1
Length = 359
Score = 337 bits (864), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 159/312 (50%), Positives = 224/312 (71%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
+ +I + QK+I GL+ LI D ++ +A EE + +++ L SLLPKD
Sbjct: 46 ISVIDQYNILQKDIAGLEELINNPETDHELKSLAKEEFYERQKQLPKVKHKLKLSLLPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D R+ ILE+RAGTGGEEA+LF D+++MY +Y+++K WKFE + + + + G+KE S
Sbjct: 106 KDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEISL 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
ISG V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++ +DLRID
Sbjct: 166 CISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
YRS G GGQ NTT+SAVR+THIP+G+ + QDE+SQH NK+KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKSKALKVLRARLYNLEKQK 285
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
S++R QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+ NLD FI+AL
Sbjct: 286 RDAEISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLDDIMKEGNLDEFIEAL 345
Query: 301 LLQQEMDAIASF 312
+ + E + + +
Sbjct: 346 IAEDEANKLKNL 357
>sp|B3CQD1|RF1_ORITI Peptide chain release factor 1 OS=Orientia tsutsugamushi (strain
Ikeda) GN=prfA PE=3 SV=1
Length = 359
Score = 335 bits (859), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 155/310 (50%), Positives = 231/310 (74%), Gaps = 2/310 (0%)
Query: 3 LISELRTKQKEIDGLKSL--IYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
+I +L K + +K L + + +D ++ +A EL ++ +L+ + SLLPK+
Sbjct: 44 IIEKLNRYLKAHENIKYLQQVIDTEQDLELKSIAEVELYDTLNYLPKLEEEVKISLLPKE 103
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D ++ I+EVRAGTGG+EA+LFA +F+MY RY+++K WKFE++ ++++++ GYKEASA
Sbjct: 104 SDDHKNAIIEVRAGTGGDEAALFAASLFQMYNRYAERKKWKFELLSISDTEIGGYKEASA 163
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
ISG GV+ LKFESG+HRVQR+P TE +GR+HTSA +V +LP+A+EVDV++ +DL+ID
Sbjct: 164 LISGNGVFANLKFESGVHRVQRIPKTESNGRIHTSAATVVVLPEAEEVDVKIDAKDLKID 223
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
TYR+ G+GGQH NTT+SAVR+THIPTG+ +S QDE+SQH NKAKA+K+L A+LY++E+ +
Sbjct: 224 TYRASGAGGQHVNTTDSAVRITHIPTGVVVSQQDEKSQHKNKAKAMKILYARLYDLEKQK 283
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
++ R Q+G+GDRSERIRTYN+PQGRVTDHR+ +T + I ++++ LD I+ L
Sbjct: 284 SQQEQAMSRKVQVGTGDRSERIRTYNYPQGRVTDHRINLTLYKIEEIIQEGKLDEIINNL 343
Query: 301 LLQQEMDAIA 310
+ + E IA
Sbjct: 344 ISENEAKKIA 353
>sp|Q6G5T7|RF1_BARHE Peptide chain release factor 1 OS=Bartonella henselae (strain ATCC
49882 / Houston 1) GN=prfA PE=3 SV=1
Length = 359
Score = 335 bits (859), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/301 (54%), Positives = 223/301 (74%), Gaps = 8/301 (2%)
Query: 13 EIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVR 72
EI L+++I + D +M +A EEL L + ++L+ L LLPKD ADE+ I+E+R
Sbjct: 58 EITDLETIISDKLTDVEMRTLAQEELPLLCQKMEQLEQKLQILLLPKDVADEKSAIVEIR 117
Query: 73 AGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLK 132
AGTGG EA+LFA D+F+MYERY+ + WK EVV + E ++ GYKE A ISG GV+ KLK
Sbjct: 118 AGTGGSEAALFAGDLFRMYERYAASRNWKVEVVSLNEGEVGGYKEIIATISGRGVFSKLK 177
Query: 133 FESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHA 192
FESG+HRVQR+P TE GR+HTSA +VA+LP+A+E+D+ +R ED+RIDT R+ G+GGQH
Sbjct: 178 FESGVHRVQRIPETETGGRIHTSAATVAVLPEAEEIDIEIRPEDIRIDTMRASGAGGQHV 237
Query: 193 NTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQ 252
NTT+SAVR+THIPTG+ + +Q E+SQH N+A+AL++L A+L+++ER + RS R Q
Sbjct: 238 NTTDSAVRITHIPTGIMV-VQAEKSQHQNRARALQILRARLFDIERQKAENERSASRKSQ 296
Query: 253 IGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALL------LQQEM 306
+GSGDRSERIRTYNFPQGRVTDHR+ +T + + ++EG +LD I AL+ L EM
Sbjct: 297 VGSGDRSERIRTYNFPQGRVTDHRINLTLYKLDRVLEG-DLDELIHALISDHQTALLMEM 355
Query: 307 D 307
D
Sbjct: 356 D 356
>sp|Q3YS23|RF1_EHRCJ Peptide chain release factor 1 OS=Ehrlichia canis (strain Jake)
GN=prfA PE=3 SV=1
Length = 359
Score = 335 bits (859), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/312 (50%), Positives = 224/312 (71%)
Query: 1 MHLISELRTKQKEIDGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKD 60
+ +I + + QK+I L+ LI D ++ +A EE + ++++ L SL+PKD
Sbjct: 46 ISVIDQYNSLQKDIADLEELINNPETDHELKSLAKEEFYERQKQLPKIKNKLKLSLIPKD 105
Query: 61 DADERDCILEVRAGTGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASA 120
D R+ ILE+RAGTGGEEA+LF D+++MY +Y+++K WKFE + + + + G+KE S
Sbjct: 106 RDDARNAILEIRAGTGGEEAALFVTDLYRMYTKYAEQKNWKFEQINSSSTGIGGHKEVSL 165
Query: 121 AISGVGVYGKLKFESGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRID 180
ISG V+ +LKFESG+HRVQRVP TE SGR+HTSA +VA+LP+ +EVD+++ +DLRID
Sbjct: 166 CISGSNVFARLKFESGVHRVQRVPETEASGRLHTSAATVAVLPEIEEVDLKIDEKDLRID 225
Query: 181 TYRSGGSGGQHANTTNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSR 240
YRS G GGQ NTT+SAVR+THIP+G+ + QDE+SQH NK KALKVL A+LY +E+ +
Sbjct: 226 VYRSSGPGGQSVNTTDSAVRITHIPSGIVVIQQDEKSQHKNKNKALKVLRARLYNLEKQK 285
Query: 241 IHLSRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDAL 300
S++R QIGSGDRSERIRTYNFPQ R+TDHR+ +T + + D+M+ NLD FIDAL
Sbjct: 286 RDSEISQMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTLYRLEDIMKEGNLDEFIDAL 345
Query: 301 LLQQEMDAIASF 312
+ + E + + +
Sbjct: 346 IAEDEANKLKNL 357
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,747,419
Number of Sequences: 539616
Number of extensions: 4570495
Number of successful extensions: 14087
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 12271
Number of HSP's gapped (non-prelim): 981
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)