BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021201
(316 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana
GN=At3g12360 PE=2 SV=1
Length = 590
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 111 RDLKEKGEKWMKDTASSCMIVATLIATVVFAAALTVPGGNKEDTGLPFFLHNVSFKIFAV 170
++L++ + + + +S +VA L ATV FAA TVPGG+ D G + SFKIF +
Sbjct: 405 KELRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPGGDNND-GSAVVVGRASFKIFFI 463
Query: 171 SNVISLVASTLSIVVFLSLVTPRY-AEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATS 229
N ++L S +VV ++LV AEK + ++ + +++A V F A+S
Sbjct: 464 FNALALFTSLAVVVVQITLVRGETKAEKRVVEVINK-------LMWLASMCTSVAFLASS 516
Query: 230 FIVFTDGSTWIAILVIVVPSV 250
+IV + W A LV VV V
Sbjct: 517 YIVVGRKNEWAAELVTVVGGV 537
>sp|Q9ZU96|Y2168_ARATH Ankyrin repeat-containing protein At2g01680 OS=Arabidopsis thaliana
GN=At2g01680 PE=1 SV=1
Length = 532
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 129/321 (40%), Gaps = 67/321 (20%)
Query: 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPD--- 61
D+ T H+AV R +E+ + I D +++ D +GN LH+A + A P
Sbjct: 193 DKKGQTALHMAVKGRSLEVVEEILQADYT-----ILNERDRKGNTALHIATRKARPQITS 247
Query: 62 ---RLNVVSGSALQMQREL-------LWFQAVKKVVPRKLAEAKNKKG----------LT 101
+ +A+ Q+E L + + L EA K G
Sbjct: 248 LLLTFTAIEVNAINNQKETAMDLADKLQYSESALEINEALVEAGAKHGRFIGREDEARAL 307
Query: 102 PRALFSEQH--------------------RDLKEKGEKWMKDTASSCMIVATLIATVVFA 141
RA+ +H ++L++ + +++T +S +VA L A++ F
Sbjct: 308 KRAVSDIKHEVQSQLLQNEKTNRRVSGIAKELRKLHREAVQNTTNSITVVAVLFASIAFL 367
Query: 142 AALTVPGG---NKEDTGLPFFLHNVSFKIFAVSNVISLVASTLSIVVFLSLVT-PRYAEK 197
A +PG G F++F + N SL S +VV ++LV A+K
Sbjct: 368 AIFNLPGQYFTEGSHVGQANIAGRTGFRVFCLLNATSLFISLAVVVVQITLVAWDTRAQK 427
Query: 198 DFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIVFTDGSTWIAILV------IVVPSVP 251
+S++ + ++ F A F A +F V G++W+AI + I+V ++
Sbjct: 428 KVVSVVNKLMWAACACTFGA-------FLAIAFAVVGKGNSWMAITITLLGAPILVGTLA 480
Query: 252 AILFFYL--HFRLFDDILRSV 270
++ +F FR +D R +
Sbjct: 481 SMCYFVFRQRFRSGNDSQRRI 501
>sp|Q64Y02|DXS_BACFR 1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis
(strain YCH46) GN=dxs PE=3 SV=1
Length = 648
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 72/185 (38%), Gaps = 31/185 (16%)
Query: 20 QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSAL-QMQRELL 78
+ F ID D+K IA +L D D +G ILH L+ + G +++
Sbjct: 252 NIRYFGPIDGHDVKNIARILHDIKDMQGPKILH----------LHTIKGKGFGPAEKQAT 301
Query: 79 WFQAVKKVVP----RKLAEAKNKKGLTP--RALFSEQHRDLKEKGEKWMKDT---ASSC- 128
+ A K P R +A N G+ P + +F +L EK ++ M T S C
Sbjct: 302 IWHAPGKFDPVTGKRIVA---NTDGMPPLFQDVFGHTLVELAEKNKRIMGVTPAMPSGCS 358
Query: 129 -------MIVATLIATVVFAAALTVPGGNKEDTGLPFFLHNVSFKIFAVSNVISLVASTL 181
M + A+T GG +D LPF SF A N+I VA
Sbjct: 359 MNMLMDRMPDRAFDVGIAEGHAVTFSGGMAKDGLLPFCNIYSSFMQRAYDNIIHDVAIQK 418
Query: 182 SIVVF 186
VVF
Sbjct: 419 LNVVF 423
>sp|Q5LH44|DXS_BACFN 1-deoxy-D-xylulose-5-phosphate synthase OS=Bacteroides fragilis
(strain ATCC 25285 / NCTC 9343) GN=dxs PE=3 SV=1
Length = 648
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 72/185 (38%), Gaps = 31/185 (16%)
Query: 20 QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSAL-QMQRELL 78
+ F ID D+K IA +L D D +G ILH L+ + G +++
Sbjct: 252 NIRYFGPIDGHDVKNIARILHDIKDMQGPKILH----------LHTIKGKGFGPAEKQAT 301
Query: 79 WFQAVKKVVP----RKLAEAKNKKGLTP--RALFSEQHRDLKEKGEKWMKDT---ASSC- 128
+ A K P R +A N G+ P + +F +L EK ++ M T S C
Sbjct: 302 IWHAPGKFDPVTGKRIVA---NTDGMPPLFQDVFGHTLVELAEKNKRIMGVTPAMPSGCS 358
Query: 129 -------MIVATLIATVVFAAALTVPGGNKEDTGLPFFLHNVSFKIFAVSNVISLVASTL 181
M + A+T GG +D LPF SF A N+I VA
Sbjct: 359 MNMLMDRMPDRAFDVGIAEGHAVTFSGGMAKDGLLPFCNIYSSFMQRAYDNIIHDVAIQK 418
Query: 182 SIVVF 186
VVF
Sbjct: 419 LNVVF 423
>sp|P34641|CED11_CAEEL Protein ced-11 OS=Caenorhabditis elegans GN=ced-11 PE=2 SV=1
Length = 1418
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 14 IAVSNRQVELFKFIDADDMKAIADLLVD------STDGEGNNILHLAGKLAPPDRLNVVS 67
++ ++ V+L +FID+ + ++ ++VD +T GE +L LA KL P L+ +
Sbjct: 312 VSSNSGDVQLIEFIDSSQLSELSSVVVDRCLECYATTGEERQVLLLAAKLNSPSVLSSMD 371
Query: 68 GSALQMQRELL 78
+A Q+ ELL
Sbjct: 372 VAA-QLDEELL 381
>sp|Q49LS3|XKR5_PANTR XK-related protein 5 OS=Pan troglodytes GN=XKR5 PE=2 SV=1
Length = 686
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 175 SLVASTLSIVVFLSLVTPRYAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIVFT 234
SL + +S F+ + P + + +L ++L+ +G L + ++++ + A F VF
Sbjct: 152 SLSWALVSYTRFMGFMKPGHLAMPWAALFCQQLWR-MGMLGTRVMSLVLFYKAYHFWVFV 210
Query: 235 -DGSTWIAILVIVVPSVPAILFFYLHFRLFDDILRSVFVSDYL 276
G+ W+ + +V I+ H+RLF+ ++ +V++ YL
Sbjct: 211 VAGAHWLVMTFWLVAQQSDIIDSTCHWRLFNLLVGAVYILCYL 253
>sp|Q6UX68|XKR5_HUMAN XK-related protein 5 OS=Homo sapiens GN=XKR5 PE=2 SV=1
Length = 686
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 175 SLVASTLSIVVFLSLVTPRYAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIVFT 234
SL + +S F+ + P + + +L ++L+ +G L + ++++ + A F VF
Sbjct: 152 SLSWALVSYTRFMGFMKPGHLAMPWAALFCQQLWR-MGMLGTRVLSLVLFYKAYHFWVFV 210
Query: 235 -DGSTWIAILVIVVPSVPAILFFYLHFRLFDDILRSVFVSDYL 276
G+ W+ + +V I+ H+RLF+ ++ +V++ YL
Sbjct: 211 VAGAHWLVMTFWLVAQQSDIIDSTCHWRLFNLLVGAVYILCYL 253
>sp|Q6AWW5|Y5262_ARATH Ankyrin repeat-containing protein At5g02620 OS=Arabidopsis thaliana
GN=At5g02620 PE=1 SV=1
Length = 524
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 120/312 (38%), Gaps = 86/312 (27%)
Query: 3 KCDENRYTIFHIAVSNRQVELFK-FIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPD 61
+ D+ T H+AV + E+ ++AD L++S D +GN LH+A + +
Sbjct: 188 RVDKKGQTALHMAVKGQNTEIVDVLMEADGS------LINSADNKGNTPLHIAVRKNRAE 241
Query: 62 RLNVV-------------SG-SALQMQR-----------ELLWFQAVKKVVPRKLAE--- 93
+ V SG +AL + + + Q + + P + E
Sbjct: 242 IVQTVLKYCEVSRVAVNKSGETALDIAEKTGLHEIVPLLQKIGMQNARSIKPAEKVEPSG 301
Query: 94 AKNKKGLTPRALFSEQHRDLKEKGE-----------------KWMKDTASSCMIVATLIA 136
+ K T + E H L++ G + + + +S +VA LIA
Sbjct: 302 SSRKLKETVSEIGHEVHTQLEQTGRTRREIQGIAKRVNKMHTEGLNNAINSTTLVAILIA 361
Query: 137 TVVFAAALTVPG---------------GNKEDTGLPFFLHNVSFKIFAVSNVISLVASTL 181
TV FAA VPG G P FL V F FA+ ISL
Sbjct: 362 TVAFAAIFNVPGQYTDDPKDVPPGYSLGEARAAPRPEFLIFVVFDSFAL--FISLAVVV- 418
Query: 182 SIVVFLSLVTPRYAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIVFTD------ 235
V +V R A+K ++++ + ++ + + I++A F + SF+V +
Sbjct: 419 --VQTSVVVIERRAKKQMMAIINKLMW--MACIMISVA-----FVSLSFVVVGEKEKPLA 469
Query: 236 -GSTWIAILVIV 246
G T I L++V
Sbjct: 470 VGVTAIGALIMV 481
>sp|Q9H9B1|EHMT1_HUMAN Histone-lysine N-methyltransferase EHMT1 OS=Homo sapiens GN=EHMT1
PE=1 SV=4
Length = 1298
Score = 33.5 bits (75), Expect = 2.4, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGK 56
C E++ T A N +E K++ +KA A LVD D EG+ LHLA K
Sbjct: 802 CSEDQRTPLMEAAENNHLEAVKYL----IKAGA--LVDPKDAEGSTCLHLAAK 848
>sp|Q6RX08|TRPV1_RABIT Transient receptor potential cation channel subfamily V member 1
OS=Oryctolagus cuniculus GN=Trpv1 PE=1 SV=1
Length = 842
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 14 IAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLA--PPDRLNVVSGSAL 71
+A Q+ + KF+ + + AD + + D GN +LH ++A PD V+
Sbjct: 257 LAACTNQLAIVKFLLQNSWQP-AD--ISARDSVGNTVLHALVEVADNTPDNTKFVT---- 309
Query: 72 QMQRELLWFQAVKKVVPR-KLAEAKNKKGLTPRAL 105
M E+L A K+ P KL E NKKGLTP AL
Sbjct: 310 SMYNEILILGA--KLHPTLKLEELINKKGLTPLAL 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,836,324
Number of Sequences: 539616
Number of extensions: 4271352
Number of successful extensions: 15657
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 15644
Number of HSP's gapped (non-prelim): 47
length of query: 316
length of database: 191,569,459
effective HSP length: 117
effective length of query: 199
effective length of database: 128,434,387
effective search space: 25558443013
effective search space used: 25558443013
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)