Query 021201
Match_columns 316
No_of_seqs 330 out of 1867
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 08:23:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021201.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/021201hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF13962 PGG: Domain of unknow 99.9 2.8E-25 6.2E-30 178.6 11.0 109 118-232 1-113 (113)
2 KOG4412 26S proteasome regulat 99.5 1.3E-14 2.9E-19 122.8 4.8 54 7-65 37-90 (226)
3 KOG4412 26S proteasome regulat 99.4 2E-14 4.3E-19 121.8 0.3 100 1-106 65-179 (226)
4 PF13857 Ank_5: Ankyrin repeat 99.3 3.3E-12 7.2E-17 89.5 3.6 48 1-54 9-56 (56)
5 PF13637 Ank_4: Ankyrin repeat 99.2 3.7E-12 8.1E-17 88.4 2.8 52 8-65 1-52 (54)
6 PHA02741 hypothetical protein; 99.2 5.8E-12 1.3E-16 108.0 3.6 83 2-110 54-143 (169)
7 PLN03192 Voltage-dependent pot 99.2 1.3E-11 2.8E-16 130.2 5.4 103 1-109 551-665 (823)
8 PHA02743 Viral ankyrin protein 99.2 1E-11 2.3E-16 106.2 2.6 80 4-109 53-138 (166)
9 PHA02736 Viral ankyrin protein 99.1 1.3E-11 2.7E-16 103.9 -0.1 79 5-109 52-136 (154)
10 KOG0195 Integrin-linked kinase 99.1 4.1E-11 8.9E-16 108.4 2.2 104 2-111 28-145 (448)
11 PHA02859 ankyrin repeat protei 99.1 7.9E-11 1.7E-15 104.5 3.6 103 1-109 79-202 (209)
12 PHA02741 hypothetical protein; 99.1 9.4E-11 2E-15 100.5 3.8 93 1-109 14-108 (169)
13 KOG0512 Fetal globin-inducing 99.1 7.9E-11 1.7E-15 99.5 2.8 60 1-66 90-149 (228)
14 PHA02874 ankyrin repeat protei 99.0 1.6E-10 3.5E-15 113.2 5.2 102 2-109 118-233 (434)
15 PHA02946 ankyin-like protein; 99.0 1.4E-10 3E-15 114.3 4.6 101 1-107 65-181 (446)
16 PHA02791 ankyrin-like protein; 99.0 1.8E-10 3.9E-15 107.0 5.0 96 7-109 60-170 (284)
17 PHA02874 ankyrin repeat protei 99.0 1.4E-10 3.1E-15 113.5 3.0 102 1-109 150-264 (434)
18 PHA02878 ankyrin repeat protei 99.0 1.8E-10 3.8E-15 114.3 3.6 60 1-66 160-220 (477)
19 PHA02878 ankyrin repeat protei 99.0 2.5E-10 5.5E-15 113.2 3.4 100 1-108 194-309 (477)
20 PHA02884 ankyrin repeat protei 99.0 3.1E-10 6.8E-15 105.9 3.5 102 2-109 26-147 (300)
21 KOG0510 Ankyrin repeat protein 99.0 2.4E-10 5.2E-15 115.3 2.8 101 1-105 299-416 (929)
22 PHA02791 ankyrin-like protein; 99.0 2.8E-10 6.1E-15 105.7 3.1 81 2-109 24-104 (284)
23 KOG0509 Ankyrin repeat and DHH 99.0 2.8E-10 6E-15 112.3 3.2 102 2-109 72-188 (600)
24 PHA02946 ankyin-like protein; 99.0 6.7E-10 1.5E-14 109.5 5.6 99 4-109 137-252 (446)
25 KOG0510 Ankyrin repeat protein 98.9 7.6E-10 1.7E-14 111.7 4.6 60 1-66 266-325 (929)
26 PHA03095 ankyrin-like protein; 98.9 5E-10 1.1E-14 110.3 3.1 101 3-109 182-300 (471)
27 PF12796 Ank_2: Ankyrin repeat 98.9 6.2E-10 1.4E-14 84.6 2.4 53 8-66 26-78 (89)
28 PHA02859 ankyrin repeat protei 98.9 7.3E-10 1.6E-14 98.3 3.1 83 2-107 45-131 (209)
29 KOG0509 Ankyrin repeat and DHH 98.9 5.1E-10 1.1E-14 110.5 1.8 95 9-109 45-155 (600)
30 PHA02875 ankyrin repeat protei 98.9 8.7E-10 1.9E-14 107.1 3.3 101 4-109 64-178 (413)
31 KOG0514 Ankyrin repeat protein 98.9 5.7E-10 1.2E-14 103.8 1.7 80 6-109 338-417 (452)
32 PHA03100 ankyrin repeat protei 98.9 1.4E-09 2.9E-14 107.5 4.4 101 3-109 136-260 (480)
33 PHA02730 ankyrin-like protein; 98.9 1.5E-09 3.2E-14 110.5 4.2 101 3-109 36-165 (672)
34 KOG4214 Myotrophin and similar 98.8 9.7E-10 2.1E-14 83.8 1.7 78 7-109 33-110 (117)
35 KOG0195 Integrin-linked kinase 98.8 1.4E-09 3E-14 98.5 2.9 57 1-63 60-116 (448)
36 PHA03095 ankyrin-like protein; 98.8 1.6E-09 3.4E-14 106.7 3.2 103 1-109 40-162 (471)
37 PHA02875 ankyrin repeat protei 98.8 2.9E-09 6.3E-14 103.4 4.9 102 2-109 29-145 (413)
38 PF13857 Ank_5: Ankyrin repeat 98.8 4.1E-10 8.8E-15 78.9 -0.8 49 39-106 8-56 (56)
39 KOG4177 Ankyrin [Cell wall/mem 98.8 1.4E-09 3.1E-14 115.0 2.2 102 2-109 534-654 (1143)
40 PHA02876 ankyrin repeat protei 98.8 4.1E-09 8.9E-14 109.0 5.2 59 1-65 171-229 (682)
41 PHA02743 Viral ankyrin protein 98.8 3.8E-09 8.2E-14 90.4 4.0 61 1-66 86-147 (166)
42 PHA02716 CPXV016; CPX019; EVM0 98.8 4.5E-09 9.8E-14 108.7 3.8 79 2-106 170-254 (764)
43 PHA02917 ankyrin-like protein; 98.8 5E-09 1.1E-13 107.9 4.1 99 2-106 26-143 (661)
44 PHA02798 ankyrin-like protein; 98.7 3.5E-09 7.6E-14 105.4 2.3 53 1-59 64-121 (489)
45 PHA03100 ankyrin repeat protei 98.7 7.9E-09 1.7E-13 102.1 4.7 102 2-109 170-293 (480)
46 PHA02876 ankyrin repeat protei 98.7 8.2E-09 1.8E-13 106.8 4.2 103 1-109 334-452 (682)
47 PHA02716 CPXV016; CPX019; EVM0 98.7 6.6E-09 1.4E-13 107.5 3.3 101 1-107 205-325 (764)
48 PHA02989 ankyrin repeat protei 98.7 9.2E-09 2E-13 102.6 3.7 60 1-66 249-308 (494)
49 KOG0508 Ankyrin repeat protein 98.7 3.9E-09 8.3E-14 101.2 0.9 58 3-66 145-202 (615)
50 PHA02736 Viral ankyrin protein 98.7 1.1E-08 2.4E-13 85.9 3.5 60 1-66 84-145 (154)
51 COG0666 Arp FOG: Ankyrin repea 98.7 1.7E-08 3.7E-13 87.5 4.5 86 2-109 100-190 (235)
52 PHA02795 ankyrin-like protein; 98.7 1.1E-08 2.5E-13 99.5 3.5 53 1-59 214-266 (437)
53 PTZ00322 6-phosphofructo-2-kin 98.7 1.6E-08 3.5E-13 104.4 4.5 60 1-66 108-167 (664)
54 PHA02795 ankyrin-like protein; 98.7 7.2E-09 1.6E-13 100.9 1.8 76 8-109 188-264 (437)
55 PHA02884 ankyrin repeat protei 98.6 1.5E-08 3.3E-13 94.6 3.0 56 5-66 67-123 (300)
56 cd00204 ANK ankyrin repeats; 98.6 3.6E-08 7.9E-13 77.6 4.7 58 3-66 2-59 (126)
57 PHA02798 ankyrin-like protein; 98.6 1.8E-08 3.9E-13 100.3 3.5 60 1-66 251-310 (489)
58 PHA02989 ankyrin repeat protei 98.6 2.6E-08 5.6E-13 99.3 4.0 60 1-66 101-166 (494)
59 PHA02917 ankyrin-like protein; 98.6 2.4E-08 5.2E-13 102.9 3.2 82 2-108 390-494 (661)
60 TIGR00870 trp transient-recept 98.6 6.2E-08 1.3E-12 101.3 5.7 98 6-109 126-267 (743)
61 PLN03192 Voltage-dependent pot 98.6 3.3E-08 7.2E-13 104.5 3.4 86 1-108 584-698 (823)
62 PF12796 Ank_2: Ankyrin repeat 98.5 2.8E-08 6.2E-13 75.4 1.6 69 12-109 1-69 (89)
63 KOG4177 Ankyrin [Cell wall/mem 98.5 7.2E-08 1.6E-12 102.4 4.4 60 1-66 566-625 (1143)
64 KOG0505 Myosin phosphatase, re 98.5 4.7E-08 1E-12 95.0 2.2 81 3-108 193-273 (527)
65 KOG0515 p53-interacting protei 98.5 6.2E-08 1.3E-12 94.0 1.8 57 4-66 579-635 (752)
66 PHA02730 ankyrin-like protein; 98.4 1.5E-07 3.2E-12 96.1 3.9 83 1-108 410-505 (672)
67 KOG0507 CASK-interacting adapt 98.4 7.9E-08 1.7E-12 96.8 1.6 60 1-66 42-101 (854)
68 KOG0514 Ankyrin repeat protein 98.4 6.1E-08 1.3E-12 90.4 0.6 110 1-115 261-390 (452)
69 KOG0512 Fetal globin-inducing 98.4 1.6E-07 3.4E-12 79.7 2.6 83 2-109 124-208 (228)
70 TIGR00870 trp transient-recept 98.4 2.4E-07 5.2E-12 96.9 4.3 109 1-109 45-218 (743)
71 PHA02792 ankyrin-like protein; 98.4 1.4E-07 3.1E-12 95.3 2.0 46 8-59 339-386 (631)
72 KOG0502 Integral membrane anky 98.3 1.3E-07 2.9E-12 82.9 0.7 99 2-108 123-235 (296)
73 PF00023 Ank: Ankyrin repeat H 98.3 6.6E-07 1.4E-11 55.5 3.4 33 7-45 1-33 (33)
74 PF13606 Ank_3: Ankyrin repeat 98.2 9.2E-07 2E-11 53.8 2.9 26 7-34 1-26 (30)
75 KOG0505 Myosin phosphatase, re 98.2 6.5E-07 1.4E-11 87.2 2.2 82 2-108 67-148 (527)
76 KOG0783 Uncharacterized conser 98.2 2.2E-07 4.7E-12 94.3 -1.1 81 2-107 46-127 (1267)
77 PTZ00322 6-phosphofructo-2-kin 98.2 7.7E-07 1.7E-11 92.0 2.2 74 11-109 85-158 (664)
78 KOG3676 Ca2+-permeable cation 98.2 6.9E-07 1.5E-11 90.9 1.6 81 7-110 239-319 (782)
79 PHA02792 ankyrin-like protein; 98.1 2E-06 4.4E-11 87.1 3.4 60 1-66 168-236 (631)
80 KOG0508 Ankyrin repeat protein 98.1 8.4E-07 1.8E-11 85.4 0.5 108 2-115 111-232 (615)
81 KOG0507 CASK-interacting adapt 98.1 6.4E-07 1.4E-11 90.4 -0.5 80 4-108 78-157 (854)
82 KOG0502 Integral membrane anky 98.1 3.7E-06 8E-11 74.0 4.0 106 1-112 153-272 (296)
83 KOG1710 MYND Zn-finger and ank 98.0 3.5E-06 7.7E-11 76.7 2.8 61 1-66 38-98 (396)
84 COG0666 Arp FOG: Ankyrin repea 97.9 1.3E-05 2.8E-10 69.3 3.9 85 4-109 69-157 (235)
85 cd00204 ANK ankyrin repeats; 97.8 1.8E-05 4E-10 61.9 3.9 59 2-66 34-92 (126)
86 KOG0522 Ankyrin repeat protein 97.8 2.1E-05 4.5E-10 76.8 4.7 58 1-64 48-105 (560)
87 PF13637 Ank_4: Ankyrin repeat 97.7 3.2E-05 7E-10 53.2 3.2 28 1-28 27-54 (54)
88 KOG0818 GTPase-activating prot 97.7 2.9E-05 6.3E-10 75.2 3.5 87 4-115 123-217 (669)
89 KOG0782 Predicted diacylglycer 97.7 1.7E-05 3.7E-10 77.9 1.9 84 3-109 894-977 (1004)
90 KOG3676 Ca2+-permeable cation 97.6 3.1E-05 6.8E-10 79.0 1.8 80 6-106 182-280 (782)
91 KOG0506 Glutaminase (contains 97.4 3E-05 6.5E-10 74.9 -0.3 61 1-66 532-592 (622)
92 KOG0705 GTPase-activating prot 97.3 0.00012 2.7E-09 72.1 2.2 56 5-66 658-713 (749)
93 KOG0521 Putative GTPase activa 97.2 0.00017 3.6E-09 75.5 2.6 79 6-109 654-732 (785)
94 PF13606 Ank_3: Ankyrin repeat 97.2 7.6E-05 1.7E-09 45.2 -0.2 21 46-66 1-21 (30)
95 PF00023 Ank: Ankyrin repeat H 97.2 6.4E-05 1.4E-09 46.4 -0.6 21 46-66 1-21 (33)
96 KOG2384 Major histocompatibili 97.1 0.00025 5.5E-09 61.2 2.0 61 1-66 5-65 (223)
97 KOG0522 Ankyrin repeat protein 97.0 0.0002 4.4E-09 70.1 0.9 75 11-108 23-97 (560)
98 KOG0818 GTPase-activating prot 97.0 0.00049 1.1E-08 67.0 3.4 54 6-65 165-218 (669)
99 KOG0506 Glutaminase (contains 96.5 0.0012 2.6E-08 64.1 2.0 81 4-108 502-582 (622)
100 KOG0515 p53-interacting protei 96.3 0.0026 5.6E-08 62.6 2.7 73 12-109 554-626 (752)
101 KOG4214 Myotrophin and similar 96.0 0.0072 1.6E-07 46.6 3.4 46 1-52 60-105 (117)
102 KOG0520 Uncharacterized conser 95.8 0.007 1.5E-07 63.9 3.4 84 2-110 568-652 (975)
103 smart00248 ANK ankyrin repeats 95.6 0.015 3.2E-07 32.4 3.1 23 7-29 1-23 (30)
104 KOG0705 GTPase-activating prot 95.5 0.0062 1.3E-07 60.5 1.7 77 12-109 628-704 (749)
105 KOG4369 RTK signaling protein 95.3 0.007 1.5E-07 64.3 1.3 94 7-106 756-864 (2131)
106 KOG0520 Uncharacterized conser 95.3 0.014 3.1E-07 61.6 3.4 67 1-69 634-702 (975)
107 KOG1710 MYND Zn-finger and ank 95.0 0.016 3.6E-07 53.2 2.7 57 4-66 75-131 (396)
108 KOG3609 Receptor-activated Ca2 94.9 0.008 1.7E-07 62.2 0.4 64 1-66 55-150 (822)
109 KOG0521 Putative GTPase activa 93.4 0.035 7.5E-07 58.5 1.5 57 1-63 682-738 (785)
110 KOG4369 RTK signaling protein 93.4 0.033 7.2E-07 59.5 1.2 53 6-64 890-943 (2131)
111 KOG0783 Uncharacterized conser 93.3 0.084 1.8E-06 54.9 3.9 50 4-59 81-131 (1267)
112 KOG0511 Ankyrin repeat protein 91.7 0.11 2.5E-06 49.5 2.3 49 12-66 40-88 (516)
113 KOG0782 Predicted diacylglycer 91.4 0.12 2.5E-06 51.7 2.1 57 3-65 929-985 (1004)
114 KOG2505 Ankyrin repeat protein 90.6 0.17 3.6E-06 49.9 2.3 45 5-55 427-471 (591)
115 KOG2505 Ankyrin repeat protein 90.0 0.15 3.2E-06 50.2 1.4 69 21-108 404-472 (591)
116 KOG0511 Ankyrin repeat protein 85.4 1 2.2E-05 43.3 3.9 33 1-35 62-94 (516)
117 KOG4591 Uncharacterized conser 83.4 0.67 1.4E-05 40.7 1.7 51 5-57 219-270 (280)
118 KOG2384 Major histocompatibili 82.0 0.49 1.1E-05 41.3 0.3 27 40-66 5-31 (223)
119 KOG3609 Receptor-activated Ca2 72.5 1.9 4E-05 45.3 1.4 58 7-66 24-81 (822)
120 PF06570 DUF1129: Protein of u 54.4 1E+02 0.0022 27.0 8.9 11 97-107 43-53 (206)
121 PF12304 BCLP: Beta-casein lik 46.0 47 0.001 28.8 5.1 31 166-196 38-69 (188)
122 PF05297 Herpes_LMP1: Herpesvi 36.1 12 0.00026 34.8 0.0 16 236-251 133-148 (381)
123 COG4298 Uncharacterized protei 35.6 73 0.0016 24.1 4.0 19 167-185 15-33 (95)
124 PF05313 Pox_P21: Poxvirus P21 30.6 2.2E+02 0.0049 24.7 6.8 29 207-235 84-112 (189)
125 PRK07668 hypothetical protein; 28.0 4.8E+02 0.01 23.9 9.9 47 97-143 43-91 (254)
126 KOG2927 Membrane component of 27.9 1.5E+02 0.0033 28.4 5.8 52 221-272 198-251 (372)
127 PF02990 EMP70: Endomembrane p 27.8 6.1E+02 0.013 25.6 10.7 47 211-257 301-347 (521)
128 KOG3788 Predicted divalent cat 26.9 6.3E+02 0.014 25.0 10.1 136 128-279 118-271 (441)
129 PF11368 DUF3169: Protein of u 25.8 3.9E+02 0.0084 24.0 8.1 29 203-231 95-123 (248)
130 PF12805 FUSC-like: FUSC-like 21.2 6.4E+02 0.014 23.0 8.8 22 241-262 74-95 (284)
131 PF12273 RCR: Chitin synthesis 21.0 95 0.0021 25.0 2.8 11 238-248 1-11 (130)
No 1
>PF13962 PGG: Domain of unknown function
Probab=99.92 E-value=2.8e-25 Score=178.62 Aligned_cols=109 Identities=41% Similarity=0.682 Sum_probs=97.3
Q ss_pred cccccccchhHHHHHHHHHHHHHHhhccCCCCCcCC---CCcccccCCc-chhhhHhHHHHHHHHHHHHHHHHhhhcCcc
Q 021201 118 EKWMKDTASSCMIVATLIATVVFAAALTVPGGNKED---TGLPFFLHNV-SFKIFAVSNVISLVASTLSIVVFLSLVTPR 193 (316)
Q Consensus 118 ~k~lk~t~~s~lvvA~Liatvtf~a~~t~Pgg~~~~---~G~~~~~~~~-~f~~F~~~n~~a~~~S~~~i~~~~~~~~s~ 193 (316)
+||++++++++++||+||||+||||+++||||+||| +|+|++.+++ .|++|+++|++||++|+++++++++.+
T Consensus 1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~~~f~~F~~~nt~af~~S~~~i~~l~~~~--- 77 (113)
T PF13962_consen 1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKPSAFKAFLISNTIAFFSSLAAIFLLISGL--- 77 (113)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhccccchhhhHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 478999999999999999999999999999999875 6999998777 999999999999999999998877422
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhe
Q 021201 194 YAEKDFLSLLPRKLYVGLGTLFIAIAAMMVVFSATSFIV 232 (316)
Q Consensus 194 ~~~~~f~~~l~~~l~~~~~~l~~si~~m~~af~~~~~~v 232 (316)
+++.+..++.+.++..++++++.+|++||++|+++|
T Consensus 78 ---~~~~~~~~~~~~~~~~~~~~a~~~~~~Af~~g~~~v 113 (113)
T PF13962_consen 78 ---DDFRRFLRRYLLIASVLMWIALISMMVAFAAGIYLV 113 (113)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 445566677788899999999999999999999875
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.3e-14 Score=122.82 Aligned_cols=54 Identities=24% Similarity=0.261 Sum_probs=28.8
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccc
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNV 65 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~ 65 (316)
+||||||||+..|+.+|+++|++ .+. ..+|.+|..|+||||+|+..|+.++++.
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLls--q~n---v~~ddkDdaGWtPlhia~s~g~~evVk~ 90 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLS--QPN---VKPDDKDDAGWTPLHIAASNGNDEVVKE 90 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHh--cCC---CCCCCccccCCchhhhhhhcCcHHHHHH
Confidence 55566666655555555555554 221 1245555555555555555555554443
No 3
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.43 E-value=2e-14 Score=121.78 Aligned_cols=100 Identities=22% Similarity=0.240 Sum_probs=82.6
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcch-hhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC---------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDM-KAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG--------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~-~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g--------- 68 (316)
++++|+.|+||||+|+.+|+.++|+.|+. + ++ .+|++.+.|.|+||+||.+|..++..+| .|
T Consensus 65 ~ddkDdaGWtPlhia~s~g~~evVk~Ll~--r~~a----dvna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~ 138 (226)
T KOG4412|consen 65 PDDKDDAGWTPLHIAASNGNDEVVKELLN--RSGA----DVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQ 138 (226)
T ss_pred CCCccccCCchhhhhhhcCcHHHHHHHhc--CCCC----CcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccc
Confidence 57899999999999999999999999999 6 43 3799999999999999999999987766 23
Q ss_pred --chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccc
Q 021201 69 --SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALF 106 (316)
Q Consensus 69 --aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~ 106 (316)
.+++-....+..+.++.++. ++.+|..|+.|.||++.+
T Consensus 139 ~qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~a 179 (226)
T KOG4412|consen 139 GQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHA 179 (226)
T ss_pred cCchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHH
Confidence 23444455666777777663 578899999999999987
No 4
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.27 E-value=3.3e-12 Score=89.54 Aligned_cols=48 Identities=23% Similarity=0.232 Sum_probs=31.8
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLA 54 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlA 54 (316)
++.+|..|+||||+|+++|+.+++++|++ .+.+ ++.+|++|+||||+|
T Consensus 9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~--~g~d----~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQ--NGAD----PNAKDKDGQTPLHYA 56 (56)
T ss_dssp TT---TTS--HHHHHHHHT-HHHHHHHHH--CT------TT---TTS--HHHH-
T ss_pred CcCcCCCCCcHHHHHHHcCcHHHHHHHHH--CcCC----CCCCcCCCCCHHHhC
Confidence 46789999999999999999999999998 7764 799999999999998
No 5
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.24 E-value=3.7e-12 Score=88.41 Aligned_cols=52 Identities=25% Similarity=0.307 Sum_probs=40.4
Q ss_pred CCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccc
Q 021201 8 RYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNV 65 (316)
Q Consensus 8 G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~ 65 (316)
|+|+||+|++.|+.+++++|++ .+.+ +|.+|++|+||||+|++.|+.++++.
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~--~~~d----in~~d~~g~t~lh~A~~~g~~~~~~~ 52 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLE--HGAD----INAQDEDGRTPLHYAAKNGNIDIVKF 52 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHH--TTSG----TT-B-TTS--HHHHHHHTT-HHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHccCHHHHHH
Confidence 7999999999999999999999 6653 79999999999999999998665543
No 6
>PHA02741 hypothetical protein; Provisional
Probab=99.22 E-value=5.8e-12 Score=107.97 Aligned_cols=83 Identities=20% Similarity=0.245 Sum_probs=63.2
Q ss_pred ccccCCCCcHHhHHHHCCC----HHHHHHHhhcchhhhhhhhcccCCC-CCChHHHHHhhhCCCCccccccCchHHhHHH
Q 021201 2 WKCDENRYTIFHIAVSNRQ----VELFKFIDADDMKAIADLLVDSTDG-EGNNILHLAGKLAPPDRLNVVSGSALQMQRE 76 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~----~~iv~~Ll~~~~~~~~~~lin~~D~-~GnTpLHlAa~~~~~~~v~~L~gaal~~~~e 76 (316)
+.+|..|+||||+|+.+|+ .+++++|++ .+++ +|.+|. +|+||||+|+..++.++++.
T Consensus 54 n~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~--~gad----in~~~~~~g~TpLh~A~~~~~~~iv~~----------- 116 (169)
T PHA02741 54 NATDDAGQMCIHIAAEKHEAQLAAEIIDHLIE--LGAD----INAQEMLEGDTALHLAAHRRDHDLAEW----------- 116 (169)
T ss_pred hccCCCCCcHHHHHHHcCChHHHHHHHHHHHH--cCCC----CCCCCcCCCCCHHHHHHHcCCHHHHHH-----------
Confidence 5678888888888888888 477888887 6553 678875 88888888888887655433
Q ss_pred hhhHhHHHHhc--cchhhhhhccCCCCccccccchh
Q 021201 77 LLWFQAVKKVV--PRKLAEAKNKKGLTPRALFSEQH 110 (316)
Q Consensus 77 l~w~~~v~~lv--~~~~~~~~N~~G~Tp~~l~~~~~ 110 (316)
++ ++.+++.+|.+|+||++++....
T Consensus 117 ---------Ll~~~g~~~~~~n~~g~tpL~~A~~~~ 143 (169)
T PHA02741 117 ---------LCCQPGIDLHFCNADNKSPFELAIDNE 143 (169)
T ss_pred ---------HHhCCCCCCCcCCCCCCCHHHHHHHCC
Confidence 33 24677889999999999987653
No 7
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.20 E-value=1.3e-11 Score=130.18 Aligned_cols=103 Identities=17% Similarity=0.108 Sum_probs=85.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccccc-----------Cc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVS-----------GS 69 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~-----------ga 69 (316)
++..|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|. +.
T Consensus 551 ~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~--~gad----in~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~ 624 (823)
T PLN03192 551 PDIGDSKGRTPLHIAASKGYEDCVLVLLK--HACN----VHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGD 624 (823)
T ss_pred CCCCCCCCCCHHHHHHHcChHHHHHHHHh--cCCC----CCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCch
Confidence 46789999999999999999999999999 7764 7999999999999999999998887661 23
Q ss_pred hHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+..+.++.++. +.+++.+|++|+||++++...
T Consensus 625 ~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~ 665 (823)
T PLN03192 625 LLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAE 665 (823)
T ss_pred HHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 4555555566666777664 578899999999999998754
No 8
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.17 E-value=1e-11 Score=106.22 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=46.2
Q ss_pred ccCCCCcHHhHHHHCCCHHH---HHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccccCchHHhHHHhhh
Q 021201 4 CDENRYTIFHIAVSNRQVEL---FKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLW 79 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~i---v~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w 79 (316)
+|.+|+||||+|+.+|+.+. +++|++ .+++ +|.+| .+|+||||+|+..++.++
T Consensus 53 ~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~--~Gad----in~~d~~~g~TpLh~A~~~g~~~i----------------- 109 (166)
T PHA02743 53 YDHHGRQCTHMVAWYDRANAVMKIELLVN--MGAD----INARELGTGNTLLHIAASTKNYEL----------------- 109 (166)
T ss_pred cCCCCCcHHHHHHHhCccCHHHHHHHHHH--cCCC----CCCCCCCCCCcHHHHHHHhCCHHH-----------------
Confidence 45555555555555555432 455555 4432 45555 355555555555555333
Q ss_pred HhHHHHhc--cchhhhhhccCCCCccccccch
Q 021201 80 FQAVKKVV--PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 80 ~~~v~~lv--~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.++ ...+++.+|.+|+||++++...
T Consensus 110 ---v~~Ll~~~gad~~~~d~~g~tpL~~A~~~ 138 (166)
T PHA02743 110 ---AEWLCRQLGVNLGAINYQHETAYHIAYKM 138 (166)
T ss_pred ---HHHHHhccCCCccCcCCCCCCHHHHHHHc
Confidence 33333 2456788899999999987654
No 9
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.10 E-value=1.3e-11 Score=103.95 Aligned_cols=79 Identities=18% Similarity=0.113 Sum_probs=42.5
Q ss_pred cCCCCcHHhHHHHCCCHH---HHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 5 DENRYTIFHIAVSNRQVE---LFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~---iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
|.+|+||||+|+.+++.+ ++++|++ .+.+ +|.+| .+|+||||+|+..++.+
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~--~gad----in~~~~~~g~T~Lh~A~~~~~~~------------------- 106 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLME--WGAD----INGKERVFGNTPLHIAVYTQNYE------------------- 106 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHH--cCCC----ccccCCCCCCcHHHHHHHhCCHH-------------------
Confidence 444444444444444432 3444444 3322 34454 25555555555555433
Q ss_pred hHHHHhcc--chhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVP--RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~--~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.++.++. ..+++.+|++|+||++++...
T Consensus 107 -i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~ 136 (154)
T PHA02736 107 -LATWLCNQPGVNMEILNYAFKTPYYVACER 136 (154)
T ss_pred -HHHHHHhCCCCCCccccCCCCCHHHHHHHc
Confidence 3343442 456788889999999887754
No 10
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.08 E-value=4.1e-11 Score=108.37 Aligned_cols=104 Identities=20% Similarity=0.212 Sum_probs=76.7
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCch---------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSA--------- 70 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~gaa--------- 70 (316)
|.-|+.|-+|||+|++.||..+++.|+. +++. +|..+....||||+||..|+.+++..| ..++
T Consensus 28 n~gddhgfsplhwaakegh~aivemll~--rgar----vn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgn 101 (448)
T KOG0195|consen 28 NVGDDHGFSPLHWAAKEGHVAIVEMLLS--RGAR----VNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGN 101 (448)
T ss_pred ccccccCcchhhhhhhcccHHHHHHHHh--cccc----cccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCC
Confidence 3457889999999999999999999999 7765 688888888999999999998887654 1222
Q ss_pred --HHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccchhh
Q 021201 71 --LQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQHR 111 (316)
Q Consensus 71 --l~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~~~ 111 (316)
++...-.+.-+..|.++. ++.++..|++|.||+|.++...+
T Consensus 102 tplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkakp~l~ 145 (448)
T KOG0195|consen 102 TPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAKPMLK 145 (448)
T ss_pred CchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhchHHH
Confidence 222222222333455554 46789999999999998876543
No 11
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.07 E-value=7.9e-11 Score=104.55 Aligned_cols=103 Identities=17% Similarity=0.102 Sum_probs=72.1
Q ss_pred Ccccc-CCCCcHHhHHHHC---CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhh--CCCCccccc--cCch--
Q 021201 1 MWKCD-ENRYTIFHIAVSN---RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKL--APPDRLNVV--SGSA-- 70 (316)
Q Consensus 1 i~~~D-~~G~T~LH~Av~~---~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~--~~~~~v~~L--~gaa-- 70 (316)
++.+| ..|+||||+|+.. ++.+++++|++ ++++ +|.+|.+|.||||+|+.. ++.+++++| .|+.
T Consensus 79 vn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~--~gad----in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin 152 (209)
T PHA02859 79 VNFKTRDNNLSALHHYLSFNKNVEPEILKILID--SGSS----ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL 152 (209)
T ss_pred CCccCCCCCCCHHHHHHHhCccccHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc
Confidence 35565 4799999998864 47899999999 7764 799999999999998764 456666655 3332
Q ss_pred ---------HHhH-HHhhhHhHHHHhc-cchhhhhhccCCCCccccccch
Q 021201 71 ---------LQMQ-RELLWFQAVKKVV-PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 71 ---------l~~~-~el~w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.. ..-...+.++.++ .+.+++.+|..|+||++++..+
T Consensus 153 ~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 153 NKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYDLIKFR 202 (209)
T ss_pred cccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence 2221 1112234445455 3577899999999999988754
No 12
>PHA02741 hypothetical protein; Provisional
Probab=99.06 E-value=9.4e-11 Score=100.47 Aligned_cols=93 Identities=13% Similarity=0.125 Sum_probs=65.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
++.+|..|+|+||+|++.|+.+++++|+....+......+|.+|..|+||||+|+..++.+.+.
T Consensus 14 ~~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~---------------- 77 (169)
T PHA02741 14 IAEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAA---------------- 77 (169)
T ss_pred hhccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHH----------------
Confidence 3567899999999999999999999986411110111236899999999999999988843210
Q ss_pred hHHHHhc-cchhhhhhcc-CCCCccccccch
Q 021201 81 QAVKKVV-PRKLAEAKNK-KGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv-~~~~~~~~N~-~G~Tp~~l~~~~ 109 (316)
+.++.++ .+.+++.+|. +|+||++++...
T Consensus 78 ~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~ 108 (169)
T PHA02741 78 EIIDHLIELGADINAQEMLEGDTALHLAAHR 108 (169)
T ss_pred HHHHHHHHcCCCCCCCCcCCCCCHHHHHHHc
Confidence 1122222 2456788885 899999987654
No 13
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.05 E-value=7.9e-11 Score=99.47 Aligned_cols=60 Identities=23% Similarity=0.203 Sum_probs=52.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+|.+|++|.||||-|+.+||.+|++.|+. .+++ .+++.++|+||||-|++-.+.+++.+|
T Consensus 90 vNtrD~D~YTpLHRAaYn~h~div~~ll~--~gAn----~~a~T~~GWTPLhSAckWnN~~va~~L 149 (228)
T KOG0512|consen 90 VNTRDEDEYTPLHRAAYNGHLDIVHELLL--SGAN----KEAKTNEGWTPLHSACKWNNFEVAGRL 149 (228)
T ss_pred ccccccccccHHHHHHhcCchHHHHHHHH--ccCC----cccccccCccchhhhhcccchhHHHHH
Confidence 57899999999999999999999999998 6665 588999999999999998887776554
No 14
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.05 E-value=1.6e-10 Score=113.20 Aligned_cols=102 Identities=24% Similarity=0.210 Sum_probs=77.1
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+++|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.++++.| .|
T Consensus 118 n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~--~gad----~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~ 191 (434)
T PHA02874 118 NIKDAELKTFLHYAIKKGDLESIKMLFE--YGAD----VNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGE 191 (434)
T ss_pred CCCCCCCccHHHHHHHCCCHHHHHHHHh--CCCC----CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 4578899999999999999999999999 6654 688999999999999999988877665 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++...+.+..+.++.++. +.+.+.++.+|.||++.+...
T Consensus 192 tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~ 233 (434)
T PHA02874 192 SPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIH 233 (434)
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHC
Confidence 34555555555555665553 355677777888888877544
No 15
>PHA02946 ankyin-like protein; Provisional
Probab=99.04 E-value=1.4e-10 Score=114.32 Aligned_cols=101 Identities=15% Similarity=0.064 Sum_probs=70.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC--CCccccc--cCchHHh---
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP--PDRLNVV--SGSALQM--- 73 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~--~~~v~~L--~gaal~~--- 73 (316)
++.+|.+|+||||+|+++|+.+++++|++ ++++ +|.+|.+|+||||+|+..++ .+++++| .|+..+.
T Consensus 65 vn~~d~~G~TpLh~Aa~~g~~eiv~lLL~--~GAd----in~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d 138 (446)
T PHA02946 65 PNETDDDGNYPLHIASKINNNRIVAMLLT--HGAD----PNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD 138 (446)
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHH--CcCC----CCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC
Confidence 46789999999999999999999999999 7764 79999999999999987664 3344444 3433321
Q ss_pred --------HHHhhhHhHHHHhcc-chhhhhhccCCCCcccccc
Q 021201 74 --------QRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFS 107 (316)
Q Consensus 74 --------~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~ 107 (316)
...-+..+.++.++. +.+.+.+|++|+||++.+.
T Consensus 139 ~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~ 181 (446)
T PHA02946 139 EEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHL 181 (446)
T ss_pred CCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHH
Confidence 111112233444442 4566777888888887654
No 16
>PHA02791 ankyrin-like protein; Provisional
Probab=99.04 E-value=1.8e-10 Score=106.96 Aligned_cols=96 Identities=11% Similarity=-0.009 Sum_probs=68.6
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCc------------hHH
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGS------------ALQ 72 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~ga------------al~ 72 (316)
+|+||||+|+++|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.++++.| .|+ +++
T Consensus 60 d~~TpLh~Aa~~g~~eiV~lLL~--~Gad----vn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~ 133 (284)
T PHA02791 60 ENEFPLHQAATLEDTKIVKILLF--SGMD----DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFY 133 (284)
T ss_pred CCCCHHHHHHHCCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHH
Confidence 47899999999999999999998 6654 688999999999999999998888766 233 333
Q ss_pred hHHHhhhHhHHHHhccchhhhhhc-cCCCCccccccch
Q 021201 73 MQRELLWFQAVKKVVPRKLAEAKN-KKGLTPRALFSEQ 109 (316)
Q Consensus 73 ~~~el~w~~~v~~lv~~~~~~~~N-~~G~Tp~~l~~~~ 109 (316)
.+...+..+.++.++... .+..| ..|.||++++...
T Consensus 134 ~Aa~~g~~eivk~LL~~~-~~~~d~~~g~TpLh~Aa~~ 170 (284)
T PHA02791 134 HAVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHITIKN 170 (284)
T ss_pred HHHHcCCHHHHHHHHhcC-CcccccccCccHHHHHHHc
Confidence 333333445555555421 11223 3589999998765
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.00 E-value=1.4e-10 Score=113.49 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=78.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCc---------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGS--------- 69 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~ga--------- 69 (316)
++.+|..|+||||+|+++|+.+++++|++ .++. ++.+|.+|+||||+|+..|+.++++.| .|+
T Consensus 150 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~--~g~~----~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g 223 (434)
T PHA02874 150 VNIEDDNGCYPIHIAIKHNFFDIIKLLLE--KGAY----ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNG 223 (434)
T ss_pred CCCcCCCCCCHHHHHHHCCcHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCC
Confidence 35678999999999999999999999999 7654 688999999999999999998888766 232
Q ss_pred --hHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccch
Q 021201 70 --ALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 --al~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.... ...+.++.++....++.+|.+|.||++.+...
T Consensus 224 ~TpL~~A~~-~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~ 264 (434)
T PHA02874 224 FTPLHNAII-HNRSAIELLINNASINDQDIDGSTPLHHAINP 264 (434)
T ss_pred CCHHHHHHH-CChHHHHHHHcCCCCCCcCCCCCCHHHHHHhc
Confidence 2332221 12234555555677888999999999988753
No 18
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.00 E-value=1.8e-10 Score=114.30 Aligned_cols=60 Identities=23% Similarity=0.220 Sum_probs=52.6
Q ss_pred CccccCC-CCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDEN-RYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~-G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.. |+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.++++.|
T Consensus 160 in~~~~~~g~tpLh~A~~~~~~~iv~~Ll~--~gad----~n~~d~~g~tpLh~A~~~~~~~iv~~L 220 (477)
T PHA02878 160 INMKDRHKGNTALHYATENKDQRLTELLLS--YGAN----VNIPDKTNNSPLHHAVKHYNKPIVHIL 220 (477)
T ss_pred CCccCCCCCCCHHHHHHhCCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 3556777 9999999999999999999999 7764 689999999999999999987776655
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=98.98 E-value=2.5e-10 Score=113.17 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=73.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhh-CCCCccccc--cCch-------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKL-APPDRLNVV--SGSA------- 70 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~-~~~~~v~~L--~gaa------- 70 (316)
++.+|..|+||||+|+++++.+++++|++ .++. +|.+|.+|+||||+|+.. ++.+++++| .|+.
T Consensus 194 ~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~--~ga~----in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~ 267 (477)
T PHA02878 194 VNIPDKTNNSPLHHAVKHYNKPIVHILLE--NGAS----TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYI 267 (477)
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCC
Confidence 35678999999999999999999999999 7764 789999999999999976 566666554 2332
Q ss_pred -----HHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 71 -----LQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 71 -----l~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
++.. ....+.++.++. +++++.+|.+|+||++++..
T Consensus 268 ~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 268 LGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPLSSAVK 309 (477)
T ss_pred CCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 2222 122333444443 46778888888888887654
No 20
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.97 E-value=3.1e-10 Score=105.86 Aligned_cols=102 Identities=13% Similarity=0.062 Sum_probs=70.5
Q ss_pred ccccCCCCc-HHhHHHHCCCHHHHHHHhhcchhhhhhhhcccC----CCCCChHHHHHhhhCCCCccccc--cCch----
Q 021201 2 WKCDENRYT-IFHIAVSNRQVELFKFIDADDMKAIADLLVDST----DGEGNNILHLAGKLAPPDRLNVV--SGSA---- 70 (316)
Q Consensus 2 ~~~D~~G~T-~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~----D~~GnTpLHlAa~~~~~~~v~~L--~gaa---- 70 (316)
-++|+.|+| +||.|+++++.+++++|++ .|++ +|.+ |.+|.||||+|+..++.+.++.| .|+.
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~--~GAd----iN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~ 99 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILK--LGAD----PEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRY 99 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHH--CCCC----ccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcc
Confidence 456777775 4666677788888888888 6664 4665 45788888888888887776655 3333
Q ss_pred --------HHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 71 --------LQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 71 --------l~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.+...++.+.++.++. +++++.+|.+|+||++++.+.
T Consensus 100 ~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~ 147 (300)
T PHA02884 100 AEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMI 147 (300)
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence 333333444555565553 578899999999999988653
No 21
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.97 E-value=2.4e-10 Score=115.28 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=58.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCchHH------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQ------ 72 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~gaal~------ 72 (316)
|+.+++++.||||.||.+|+.+.++-|++ .... .++|+.|..|+||||+|++.|+..++++| .|+.+.
T Consensus 299 I~~kn~d~~spLH~AA~yg~~ntv~rLL~--~~~~--rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D 374 (929)
T KOG0510|consen 299 INSKNKDEESPLHFAAIYGRINTVERLLQ--ESDT--RLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEAD 374 (929)
T ss_pred ccccCCCCCCchHHHHHcccHHHHHHHHh--CcCc--cccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccc
Confidence 45566666666666666666666666665 2111 13566666666666666666666655554 333322
Q ss_pred --------hHHHhhhHhHHHHhc-cchhhhhhccCCCCcccc
Q 021201 73 --------MQRELLWFQAVKKVV-PRKLAEAKNKKGLTPRAL 105 (316)
Q Consensus 73 --------~~~el~w~~~v~~lv-~~~~~~~~N~~G~Tp~~l 105 (316)
....-+.-..|+.++ +++++..+|+.|++++++
T Consensus 375 ~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 375 SDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred cCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence 111112233344444 456777888888888874
No 22
>PHA02791 ankyrin-like protein; Provisional
Probab=98.97 E-value=2.8e-10 Score=105.65 Aligned_cols=81 Identities=17% Similarity=0.162 Sum_probs=61.7
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
+..|.+|+||||+|+++|+.+++++|++ .++. +|.+ +|+||||+|+..++.++++.|
T Consensus 24 ~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~--~ga~----~n~~--d~~TpLh~Aa~~g~~eiV~lL--------------- 80 (284)
T PHA02791 24 FKADVHGHSALYYAIADNNVRLVCTLLN--AGAL----KNLL--ENEFPLHQAATLEDTKIVKIL--------------- 80 (284)
T ss_pred CCCCCCCCcHHHHHHHcCCHHHHHHHHH--CcCC----CcCC--CCCCHHHHHHHCCCHHHHHHH---------------
Confidence 3578999999999999999999999999 7653 4554 479999999999987766554
Q ss_pred HHHHhccchhhhhhccCCCCccccccch
Q 021201 82 AVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 82 ~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+ -.+.+++.+|.+|+||++++...
T Consensus 81 -L---~~Gadvn~~d~~G~TpLh~Aa~~ 104 (284)
T PHA02791 81 -L---FSGMDDSQFDDKGNTALYYAVDS 104 (284)
T ss_pred -H---HCCCCCCCCCCCCCCHHHHHHHc
Confidence 0 12345566777777777776543
No 23
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.97 E-value=2.8e-10 Score=112.35 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=66.0
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccc--cCchH-------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVV--SGSAL------- 71 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L--~gaal------- 71 (316)
++.|++|-|+||+|+.|++.+++++|++ ++++ +|+.+ .-|.||||+|+++|+..++.+| .|++.
T Consensus 72 ~~~D~~g~tlLHWAAiNNrl~v~r~li~--~gad----vn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G 145 (600)
T KOG0509|consen 72 NNPDREGVTLLHWAAINNRLDVARYLIS--HGAD----VNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQG 145 (600)
T ss_pred CCCCcCCccceeHHHHcCcHHHHHHHHH--cCCC----ccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCC
Confidence 5667788888888888888888888888 6664 67777 5667888888888877776665 34332
Q ss_pred ----HhHHHhhhHhHHHHhc-cchhhhhhccCCCCccccccch
Q 021201 72 ----QMQRELLWFQAVKKVV-PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 72 ----~~~~el~w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+.....+..--|-.++ ...+++.+|++|+||+..+..+
T Consensus 146 ~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAayk 188 (600)
T KOG0509|consen 146 LTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYK 188 (600)
T ss_pred CcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHh
Confidence 2222222222222222 2366778888888888776544
No 24
>PHA02946 ankyin-like protein; Provisional
Probab=98.96 E-value=6.7e-10 Score=109.47 Aligned_cols=99 Identities=19% Similarity=0.214 Sum_probs=58.0
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCC--Cccccc--cC-----------
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPP--DRLNVV--SG----------- 68 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~--~~v~~L--~g----------- 68 (316)
.|.+|+|||| |+..++.+++++|++ .+++ ++.+|.+|+||||+|+..++. +.++.+ .|
T Consensus 137 ~d~~g~tpL~-aa~~~~~~vv~~Ll~--~gad----~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~ 209 (446)
T PHA02946 137 VDEEGCGPLL-ACTDPSERVFKKIMS--IGFE----ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGN 209 (446)
T ss_pred cCCCCCcHHH-HHHCCChHHHHHHHh--cccc----ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCC
Confidence 4566666666 445566666666666 5442 466666666666666654443 222222 12
Q ss_pred chHHhHHHhh--hHhHHHHhccchhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELL--WFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~--w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++...+-+ ..+.++.++++.+++.+|++|+||++++.+.
T Consensus 210 TpLH~Aa~~~~~~~~iv~lLl~gadin~~d~~G~TpLh~A~~~ 252 (446)
T PHA02946 210 TPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIKT 252 (446)
T ss_pred CHHHHHHHcCCCcHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 2333332211 2334555566778999999999999987764
No 25
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.93 E-value=7.6e-10 Score=111.71 Aligned_cols=60 Identities=17% Similarity=0.178 Sum_probs=53.8
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++++|++|.||||+|+++|+.+.++.|++ .|+. +|.+++++.||||.||..|+.+.++.|
T Consensus 266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~--~Ga~----I~~kn~d~~spLH~AA~yg~~ntv~rL 325 (929)
T KOG0510|consen 266 VNDEDNDGCTPLHYAARQGGPESVDNLLG--FGAS----INSKNKDEESPLHFAAIYGRINTVERL 325 (929)
T ss_pred hhcccccCCchHHHHHHcCChhHHHHHHH--cCCc----ccccCCCCCCchHHHHHcccHHHHHHH
Confidence 47899999999999999999999999999 7764 799999999999999999987765443
No 26
>PHA03095 ankyrin-like protein; Provisional
Probab=98.92 E-value=5e-10 Score=110.25 Aligned_cols=101 Identities=16% Similarity=0.170 Sum_probs=65.8
Q ss_pred cccCCCCcHHhHHHHC--CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCC--ccccc--cC--------
Q 021201 3 KCDENRYTIFHIAVSN--RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPD--RLNVV--SG-------- 68 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~--~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~--~v~~L--~g-------- 68 (316)
..|..|+||||+|+.. ++.+++++|++ .+.+ ++.+|.+|+||||+|+..++.. .+..+ .|
T Consensus 182 ~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~--~g~~----~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~ 255 (471)
T PHA03095 182 AVDDRFRSLLHHHLQSFKPRARIVRELIR--AGCD----PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNR 255 (471)
T ss_pred ccCCCCCCHHHHHHHHCCCcHHHHHHHHH--cCCC----CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCC
Confidence 4467778888877764 56677777777 5543 5777777777777777766532 11111 11
Q ss_pred ---chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 ---SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 ---aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +++++.+|.+|+||++++...
T Consensus 256 ~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~ 300 (471)
T PHA03095 256 YGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRN 300 (471)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHh
Confidence 34444444444555665553 578899999999999988654
No 27
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.90 E-value=6.2e-10 Score=84.61 Aligned_cols=53 Identities=26% Similarity=0.362 Sum_probs=46.5
Q ss_pred CCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 8 RYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 8 G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~~~~L 78 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLE--NGAD----INSQDKNGNTALHYAAENGNLEIVKLL 78 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHH--TTTC----TT-BSTTSSBHHHHHHHTTHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHH--hccc----ccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 8999999999999999999999 7664 689999999999999999987766554
No 28
>PHA02859 ankyrin repeat protein; Provisional
Probab=98.90 E-value=7.3e-10 Score=98.33 Aligned_cols=83 Identities=14% Similarity=0.137 Sum_probs=48.3
Q ss_pred ccccCCCCcHHhHHHHCC--CHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccccCchHHhHHHhh
Q 021201 2 WKCDENRYTIFHIAVSNR--QVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELL 78 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~--~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~ 78 (316)
+..|..|+||||+|++++ +.+++++|++ .+++ +|.+| .+|.||||+|+..+...
T Consensus 45 n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~--~gad----vn~~~~~~g~TpLh~a~~~~~~~----------------- 101 (209)
T PHA02859 45 NDCNDLYETPIFSCLEKDKVNVEILKFLIE--NGAD----VNFKTRDNNLSALHHYLSFNKNV----------------- 101 (209)
T ss_pred hccCccCCCHHHHHHHcCCCCHHHHHHHHH--CCCC----CCccCCCCCCCHHHHHHHhCccc-----------------
Confidence 345666777777776644 5667777776 5543 46665 36667777665432110
Q ss_pred hHhHHHHhc-cchhhhhhccCCCCcccccc
Q 021201 79 WFQAVKKVV-PRKLAEAKNKKGLTPRALFS 107 (316)
Q Consensus 79 w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~~ 107 (316)
..+.++.++ .+.+++.+|.+|.||++.+.
T Consensus 102 ~~eiv~~Ll~~gadin~~d~~G~TpLh~a~ 131 (209)
T PHA02859 102 EPEILKILIDSGSSITEEDEDGKNLLHMYM 131 (209)
T ss_pred cHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 112223233 24667788888888888754
No 29
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=98.89 E-value=5.1e-10 Score=110.49 Aligned_cols=95 Identities=21% Similarity=0.182 Sum_probs=71.9
Q ss_pred CcHHhHHHHCCCHHHHHHHhhcch-hhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCchHH------------h
Q 021201 9 YTIFHIAVSNRQVELFKFIDADDM-KAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQ------------M 73 (316)
Q Consensus 9 ~T~LH~Av~~~~~~iv~~Ll~~~~-~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~gaal~------------~ 73 (316)
.+.++.|+++|..+-++.+++ . +. .+|..|.+|-|+||.||.+++.++++++ .|++.+ -
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve--~~g~----~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHW 118 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVE--SEGE----SVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHW 118 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHh--hcCc----CCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchH
Confidence 456788999999999999999 5 33 2689999999999999999998887766 333332 2
Q ss_pred HHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 74 QRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 74 ~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
...-+....|+-+++ +++++++|.+|.+|+|++...
T Consensus 119 Aar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~ 155 (600)
T KOG0509|consen 119 AARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQF 155 (600)
T ss_pred HHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHh
Confidence 222333566666664 588999999999999987653
No 30
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.88 E-value=8.7e-10 Score=107.07 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=67.1
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------ch
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SA 70 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aa 70 (316)
.+.+|+||||.|++.|+.+++++|++ .+.. ..+..|.+|+||||+|+..++.++++.| .| .+
T Consensus 64 ~~~~~~t~L~~A~~~g~~~~v~~Ll~--~~~~---~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tp 138 (413)
T PHA02875 64 KYPDIESELHDAVEEGDVKAVEELLD--LGKF---ADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSP 138 (413)
T ss_pred cCCCcccHHHHHHHCCCHHHHHHHHH--cCCc---ccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCH
Confidence 45667788888888888888888877 5432 1245567788888888887777766554 22 23
Q ss_pred HHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 71 LQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 71 l~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.....+..+.++.++. +.+++.+|.+|.||++++...
T Consensus 139 Lh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~ 178 (413)
T PHA02875 139 LHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAK 178 (413)
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHc
Confidence 444444444555555553 456788889999999987654
No 31
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.88 E-value=5.7e-10 Score=103.77 Aligned_cols=80 Identities=23% Similarity=0.249 Sum_probs=69.4
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHH
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKK 85 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~ 85 (316)
..|+|+|++||.+|+.++|+.|+. .+++ +|.+|.+|-|+|..|+.+|+.+++++|-
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LLa--cgAd----VNiQDdDGSTALMCA~EHGhkEivklLL------------------ 393 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALLA--CGAD----VNIQDDDGSTALMCAAEHGHKEIVKLLL------------------ 393 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHHH--ccCC----CccccCCccHHHhhhhhhChHHHHHHHh------------------
Confidence 359999999999999999999999 7764 8999999999999999999988776551
Q ss_pred hccchhhhhhccCCCCccccccch
Q 021201 86 VVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 86 lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
..|.++....|.||-|++.++-+.
T Consensus 394 A~p~cd~sLtD~DgSTAl~IAlea 417 (452)
T KOG0514|consen 394 AVPSCDISLTDVDGSTALSIALEA 417 (452)
T ss_pred ccCcccceeecCCCchhhhhHHhc
Confidence 235678889999999999998765
No 32
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.88 E-value=1.4e-09 Score=107.54 Aligned_cols=101 Identities=14% Similarity=0.211 Sum_probs=57.4
Q ss_pred cccCCCCcHHhHHHHCC--CHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCc---------
Q 021201 3 KCDENRYTIFHIAVSNR--QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGS--------- 69 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~--~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~ga--------- 69 (316)
..|..|+||||+|++.+ +.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+.++.+ .|+
T Consensus 136 ~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~--~g~d----in~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~ 209 (480)
T PHA03100 136 IKNSDGENLLHLYLESNKIDLKILKLLID--KGVD----INAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIET 209 (480)
T ss_pred ccCCCCCcHHHHHHHcCCChHHHHHHHHH--CCCC----cccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCC
Confidence 45566666666666666 6666666666 5442 466666777777777776666655544 121
Q ss_pred --------hHHhHHHhhh--HhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 --------ALQMQRELLW--FQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 --------al~~~~el~w--~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+. .+.++.++. +.+++.+|.+|.||++.+...
T Consensus 210 ~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~ 260 (480)
T PHA03100 210 LLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYN 260 (480)
T ss_pred CcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 1122222222 334444443 256677777777777776543
No 33
>PHA02730 ankyrin-like protein; Provisional
Probab=98.86 E-value=1.5e-09 Score=110.51 Aligned_cols=101 Identities=16% Similarity=0.161 Sum_probs=72.5
Q ss_pred cccCCCCcHHhHHHHCC---CHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhC--CCCccccc--cCch--HH-
Q 021201 3 KCDENRYTIFHIAVSNR---QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLA--PPDRLNVV--SGSA--LQ- 72 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~---~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~--~~~~v~~L--~gaa--l~- 72 (316)
.+|..|+||||+|+.++ +.+++++|++ +|++ +|++|.+|+||||+|+..+ +.+++++| .|+. .+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs--~GAd----in~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~ 109 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLS--RGVE----RLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNEL 109 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHh--CCCC----CcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccc
Confidence 67889999999999997 5899999999 8875 7999999999999999976 67788776 3321 11
Q ss_pred ------------hHHHhhhHhHHHHhcc--chhhhhhc-----cCCCCccccccch
Q 021201 73 ------------MQRELLWFQAVKKVVP--RKLAEAKN-----KKGLTPRALFSEQ 109 (316)
Q Consensus 73 ------------~~~el~w~~~v~~lv~--~~~~~~~N-----~~G~Tp~~l~~~~ 109 (316)
+..+-...+.||.++. ..+++..+ .+|.+|+.++++.
T Consensus 110 ~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~ 165 (672)
T PHA02730 110 TSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPN 165 (672)
T ss_pred ccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCC
Confidence 1122223445666662 23444332 2788999888765
No 34
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=98.85 E-value=9.7e-10 Score=83.82 Aligned_cols=78 Identities=17% Similarity=0.103 Sum_probs=63.1
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKV 86 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~l 86 (316)
.||+|||+|+.+||.++.+||+. .++. ++.+|+.|-|||--|++.||.+++++|-
T Consensus 33 ggR~plhyAAD~GQl~ilefli~--iGA~----i~~kDKygITPLLsAvwEGH~~cVklLL------------------- 87 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLIS--IGAN----IQDKDKYGITPLLSAVWEGHRDCVKLLL------------------- 87 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHH--hccc----cCCccccCCcHHHHHHHHhhHHHHHHHH-------------------
Confidence 59999999999999999999999 7775 7999999999999999999988877651
Q ss_pred ccchhhhhhccCCCCccccccch
Q 021201 87 VPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 87 v~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
-.+++...+-.+|.+..+...++
T Consensus 88 ~~GAdrt~~~PdG~~~~eate~e 110 (117)
T KOG4214|consen 88 QNGADRTIHAPDGTALIEATEEE 110 (117)
T ss_pred HcCcccceeCCCchhHHhhccHH
Confidence 12345556667777776655443
No 35
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.84 E-value=1.4e-09 Score=98.54 Aligned_cols=57 Identities=19% Similarity=0.176 Sum_probs=48.4
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRL 63 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v 63 (316)
||..|.-..||||+|+.+||.+||..|++ ..++ +|+.++.||||||+|+.-|...+.
T Consensus 60 vn~tnmgddtplhlaaahghrdivqkll~--~kad----vnavnehgntplhyacfwgydqia 116 (448)
T KOG0195|consen 60 VNSTNMGDDTPLHLAAAHGHRDIVQKLLS--RKAD----VNAVNEHGNTPLHYACFWGYDQIA 116 (448)
T ss_pred cccccCCCCcchhhhhhcccHHHHHHHHH--Hhcc----cchhhccCCCchhhhhhhcHHHHH
Confidence 45667778899999999999999999998 6654 799999999999999999885544
No 36
>PHA03095 ankyrin-like protein; Provisional
Probab=98.83 E-value=1.6e-09 Score=106.72 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=76.4
Q ss_pred CccccCCCCcHHhHHHHCC---CHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC-CCccccc--cCc-----
Q 021201 1 MWKCDENRYTIFHIAVSNR---QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP-PDRLNVV--SGS----- 69 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~---~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~-~~~v~~L--~ga----- 69 (316)
++.+|..|+||||+|+.++ +.+++++|++ .|++ +|.+|.+|+||||+|+..++ .+++++| .|+
T Consensus 40 vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~--~Gad----in~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~ 113 (471)
T PHA03095 40 VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLE--AGAD----VNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAK 113 (471)
T ss_pred cccCCCCCCCHHHHHHHhcCCChHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCC
Confidence 3567889999999999998 9999999999 7764 79999999999999999994 6766665 333
Q ss_pred ------hHHhHHH--hhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 ------ALQMQRE--LLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 ------al~~~~e--l~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.... ....+.++.++. +.+++.+|.+|.||++++...
T Consensus 114 ~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~ 162 (471)
T PHA03095 114 DKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKS 162 (471)
T ss_pred CCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 3333321 112334555543 467888999999999976543
No 37
>PHA02875 ankyrin repeat protein; Provisional
Probab=98.83 E-value=2.9e-09 Score=103.41 Aligned_cols=102 Identities=17% Similarity=0.096 Sum_probs=80.3
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.++.+|.||||+|+.+|+.+++++|++ .++. .+.+|.+|.||||.|+..|+.+.++.+ .|
T Consensus 29 n~~~~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~----~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g 102 (413)
T PHA02875 29 NFEIYDGISPIKLAMKFRDSEAIKLLMK--HGAI----PDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDG 102 (413)
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHh--CCCC----ccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCC
Confidence 4567789999999999999999999999 7653 577889999999999999998877654 11
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +++++.+|.+|.||++++...
T Consensus 103 ~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~ 145 (413)
T PHA02875 103 MTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMM 145 (413)
T ss_pred CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHc
Confidence 34555555555666776664 467888999999999988654
No 38
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.83 E-value=4.1e-10 Score=78.87 Aligned_cols=49 Identities=27% Similarity=0.338 Sum_probs=27.4
Q ss_pred hcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccc
Q 021201 39 LVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALF 106 (316)
Q Consensus 39 lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~ 106 (316)
.+|.+|.+|+||||+|++.|+.++++.| +-.+.+.+.+|++|+||+|++
T Consensus 8 ~~n~~d~~G~T~LH~A~~~g~~~~v~~L-------------------l~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 8 DVNAQDKYGNTPLHWAARYGHSEVVRLL-------------------LQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -TT---TTS--HHHHHHHHT-HHHHHHH-------------------HHCT--TT---TTS--HHHH-
T ss_pred CCcCcCCCCCcHHHHHHHcCcHHHHHHH-------------------HHCcCCCCCCcCCCCCHHHhC
Confidence 3799999999999999999997766544 123578899999999999875
No 39
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.81 E-value=1.4e-09 Score=115.00 Aligned_cols=102 Identities=26% Similarity=0.320 Sum_probs=74.9
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCc----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGS---------- 69 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~ga---------- 69 (316)
+.++.+|.||||+|+.+|+.++|++|++ ++++ ++++|+.|.||||.|+..|+.+++.+| +|+
T Consensus 534 ~~~~~r~~TpLh~A~~~g~v~~VkfLLe--~gAd----v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~ 607 (1143)
T KOG4177|consen 534 DLRTGRGYTPLHVAVHYGNVDLVKFLLE--HGAD----VNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGF 607 (1143)
T ss_pred ehhcccccchHHHHHhcCCchHHHHhhh--CCcc----ccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCc
Confidence 4567889999999999999999999999 8875 799999999999999999998887776 343
Q ss_pred -hHHhHHHhhhHhHHHHhcc-chh-----hhhhccCCCCccccccch
Q 021201 70 -ALQMQRELLWFQAVKKVVP-RKL-----AEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 -al~~~~el~w~~~v~~lv~-~~~-----~~~~N~~G~Tp~~l~~~~ 109 (316)
++.....+..++.++.+.. ... ...+|..|.+|.++..+.
T Consensus 608 TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~ 654 (1143)
T KOG4177|consen 608 TPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEEL 654 (1143)
T ss_pred chhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHHh
Confidence 2334444444444443321 112 455667777777776654
No 40
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.80 E-value=4.1e-09 Score=109.04 Aligned_cols=59 Identities=15% Similarity=0.074 Sum_probs=50.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNV 65 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~ 65 (316)
++.+|..|+||||+|+++|+.++|++|++ .|++ +|..|.+|.||||+|+..++.+.++.
T Consensus 171 vn~~d~~G~TpLh~Aa~~G~~~iv~~LL~--~Gad----~n~~~~~g~t~L~~A~~~~~~~ivk~ 229 (682)
T PHA02876 171 VNAKDIYCITPIHYAAERGNAKMVNLLLS--YGAD----VNIIALDDLSVLECAVDSKNIDTIKA 229 (682)
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHH--CCCC----cCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 46788999999999999999999999999 7764 67888889999999988887766544
No 41
>PHA02743 Viral ankyrin protein; Provisional
Probab=98.80 E-value=3.8e-09 Score=90.35 Aligned_cols=61 Identities=16% Similarity=0.270 Sum_probs=50.2
Q ss_pred Ccccc-CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCD-ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D-~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+| ..|+||||+|+.+++.+++++|++. .+.+ ++.+|.+|+||||+|+..++.+++++|
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~-~gad----~~~~d~~g~tpL~~A~~~~~~~iv~~L 147 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLCRQ-LGVN----LGAINYQHETAYHIAYKMRDRRMMEIL 147 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc-cCCC----ccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 45677 4899999999999999999999941 3443 688999999999999999987665544
No 42
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.76 E-value=4.5e-09 Score=108.70 Aligned_cols=79 Identities=15% Similarity=0.192 Sum_probs=63.5
Q ss_pred ccc-cCCCCcHHhHHHHC--CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCC--CccccccCchHHhHHH
Q 021201 2 WKC-DENRYTIFHIAVSN--RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPP--DRLNVVSGSALQMQRE 76 (316)
Q Consensus 2 ~~~-D~~G~T~LH~Av~~--~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~--~~v~~L~gaal~~~~e 76 (316)
+.+ |..|+||||.|+.+ ++.+++++|++ .+++ +|.+|.+|+||||+|+..|+. +++
T Consensus 170 N~~~d~~G~TpLH~A~~n~~~~~eIVklLLe--~GAD----VN~kD~~G~TPLH~Aa~~g~~~~eIV------------- 230 (764)
T PHA02716 170 NYVCKKTGYGILHAYLGNMYVDIDILEWLCN--NGVN----VNLQNNHLITPLHTYLITGNVCASVI------------- 230 (764)
T ss_pred ccccCCCCCcHHHHHHHhccCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCCCHHHH-------------
Confidence 455 78899999998754 67899999999 7764 799999999999999999863 333
Q ss_pred hhhHhHHHHhc-cchhhhhhccCCCCccccc
Q 021201 77 LLWFQAVKKVV-PRKLAEAKNKKGLTPRALF 106 (316)
Q Consensus 77 l~w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~ 106 (316)
+.++ .+++++.+|.+|+||++.+
T Consensus 231 -------klLLe~GADVN~kD~~G~TPLh~A 254 (764)
T PHA02716 231 -------KKIIELGGDMDMKCVNGMSPIMTY 254 (764)
T ss_pred -------HHHHHcCCCCCCCCCCCCCHHHHH
Confidence 3333 3567889999999999865
No 43
>PHA02917 ankyrin-like protein; Provisional
Probab=98.76 E-value=5e-09 Score=107.86 Aligned_cols=99 Identities=11% Similarity=-0.047 Sum_probs=74.4
Q ss_pred ccccCCCCcHHhHHHHC---CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcc----ccc--c-C---
Q 021201 2 WKCDENRYTIFHIAVSN---RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRL----NVV--S-G--- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~---~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v----~~L--~-g--- 68 (316)
+.+|.+|+||||+|++. |+.+++++|++ .+++ ++.+|.+|+||||.|+..|+.+++ +.+ . |
T Consensus 26 ~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~--~ga~----v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n 99 (661)
T PHA02917 26 DTRNQFKNNALHAYLFNEHCNNVEVVKLLLD--SGTN----PLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSN 99 (661)
T ss_pred cccCCCCCcHHHHHHHhhhcCcHHHHHHHHH--CCCC----ccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCC
Confidence 45689999999998655 88999999999 7764 689999999999999999985543 222 1 2
Q ss_pred -----chHHhHHHhhhHhHHHHhc-cchhhhhhccCCCCccccc
Q 021201 69 -----SALQMQRELLWFQAVKKVV-PRKLAEAKNKKGLTPRALF 106 (316)
Q Consensus 69 -----aal~~~~el~w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~ 106 (316)
..+.+..+-...+.|+.++ .+.+++.+|.+|.||++.+
T Consensus 100 ~~~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~ 143 (661)
T PHA02917 100 INDFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENY 143 (661)
T ss_pred CCCcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHH
Confidence 1122333334456677776 4588999999999999854
No 44
>PHA02798 ankyrin-like protein; Provisional
Probab=98.74 E-value=3.5e-09 Score=105.42 Aligned_cols=53 Identities=15% Similarity=0.103 Sum_probs=45.9
Q ss_pred CccccCCCCcHHhHHHHC-----CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC
Q 021201 1 MWKCDENRYTIFHIAVSN-----RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP 59 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~-----~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~ 59 (316)
++.+|..|+||||.|+.+ ++.+++++|++ .|++ +|.+|.+|+||||+|+..+.
T Consensus 64 vn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~--~Gad----iN~~d~~G~TpLh~a~~~~~ 121 (489)
T PHA02798 64 VNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIE--NGAD----INKKNSDGETPLYCLLSNGY 121 (489)
T ss_pred CCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHH--CCCC----CCCCCCCcCcHHHHHHHcCC
Confidence 467889999999999875 66899999999 7764 79999999999999998764
No 45
>PHA03100 ankyrin repeat protein; Provisional
Probab=98.74 E-value=7.9e-09 Score=102.07 Aligned_cols=102 Identities=24% Similarity=0.201 Sum_probs=77.3
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCC------ChHHHHHhhhCC--CCccccc--cC---
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEG------NNILHLAGKLAP--PDRLNVV--SG--- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~G------nTpLHlAa~~~~--~~~v~~L--~g--- 68 (316)
+.+|..|+||||+|+++|+.+++++|++ .+++ ++..|..| .||||.|+..++ .+.++.| .|
T Consensus 170 n~~d~~g~tpL~~A~~~~~~~iv~~Ll~--~ga~----~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~di 243 (480)
T PHA03100 170 NAKNRYGYTPLHIAVEKGNIDVIKFLLD--NGAD----INAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPI 243 (480)
T ss_pred ccccCCCCCHHHHHHHhCCHHHHHHHHH--cCCC----ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCC
Confidence 5678899999999999999999999999 6654 57788888 889999998888 6665544 22
Q ss_pred --------chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 --------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 --------aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +++++.+|.+|+||++++...
T Consensus 244 n~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~ 293 (480)
T PHA03100 244 NIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILN 293 (480)
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHh
Confidence 34444444444555666554 468899999999999988654
No 46
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.72 E-value=8.2e-09 Score=106.82 Aligned_cols=103 Identities=20% Similarity=0.144 Sum_probs=75.7
Q ss_pred CccccCCCCcHHhHHHHC-CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCc--------
Q 021201 1 MWKCDENRYTIFHIAVSN-RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGS-------- 69 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~-~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~ga-------- 69 (316)
++..|..|+||||+|+.. ++.+++++|++ .+++ +|.+|.+|+||||+|+..++.++++.| .|+
T Consensus 334 in~~d~~g~TpLh~A~~~~~~~~iv~lLl~--~gad----in~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~ 407 (682)
T PHA02876 334 VNAADRLYITPLHQASTLDRNKDIVITLLE--LGAN----VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQK 407 (682)
T ss_pred CCCcccCCCcHHHHHHHhCCcHHHHHHHHH--cCCC----CccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCC
Confidence 356788999999999985 56889999998 6654 789999999999999999998877765 232
Q ss_pred ---hHHhHHHhh-hHhHHHHhc-cchhhhhhccCCCCccccccch
Q 021201 70 ---ALQMQRELL-WFQAVKKVV-PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 ---al~~~~el~-w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++...... ....++.++ .+.+++.+|.+|+||++++...
T Consensus 408 g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~ 452 (682)
T PHA02876 408 IGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKK 452 (682)
T ss_pred CCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHh
Confidence 333322111 122344444 3567899999999999998754
No 47
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.71 E-value=6.6e-09 Score=107.50 Aligned_cols=101 Identities=13% Similarity=-0.004 Sum_probs=71.1
Q ss_pred CccccCCCCcHHhHHHHCCC--HHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhh---hCCCCcccccc--C-----
Q 021201 1 MWKCDENRYTIFHIAVSNRQ--VELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGK---LAPPDRLNVVS--G----- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~--~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~---~~~~~~v~~L~--g----- 68 (316)
++.+|.+|+||||+|+++|+ .+++++|++ .|++ +|.+|.+|+||||.|+. .++.++++.+- +
T Consensus 205 VN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe--~GAD----VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~ 278 (764)
T PHA02716 205 VNLQNNHLITPLHTYLITGNVCASVIKKIIE--LGGD----MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKV 278 (764)
T ss_pred CCCCCCCCCCHHHHHHHcCCCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccccc
Confidence 46789999999999999995 489999999 8775 79999999999999864 34444444330 0
Q ss_pred ---c-hHH---hHHHhhhHhHHHHhcc-chhhhhhccCCCCcccccc
Q 021201 69 ---S-ALQ---MQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFS 107 (316)
Q Consensus 69 ---a-al~---~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~ 107 (316)
+ .+. ...+-+..+.++.++. +.+++.+|.+|+||++.+.
T Consensus 279 ~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aa 325 (764)
T PHA02716 279 KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYI 325 (764)
T ss_pred ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHH
Confidence 0 000 0111223455666554 4678889999999999754
No 48
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.69 E-value=9.2e-09 Score=102.57 Aligned_cols=60 Identities=20% Similarity=0.276 Sum_probs=54.4
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|..|+||||+|+++|+.+++++|++ .|++ +|.+|.+|+||||+|+..++.++++.+
T Consensus 249 vn~~d~~G~TpL~~Aa~~~~~~~v~~LL~--~Gad----in~~d~~G~TpL~~A~~~~~~~iv~~L 308 (494)
T PHA02989 249 INKKDKKGFNPLLISAKVDNYEAFNYLLK--LGDD----IYNVSKDGDTVLTYAIKHGNIDMLNRI 308 (494)
T ss_pred CCCCCCCCCCHHHHHHHhcCHHHHHHHHH--cCCC----ccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 46789999999999999999999999999 7765 799999999999999999998877655
No 49
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.69 E-value=3.9e-09 Score=101.17 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=47.2
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
-.|..|+|.||+|+..||.+|+++|++ .+++ +|.++..|||+||.+|..|+.+++++|
T Consensus 145 IanrhGhTcLmIa~ykGh~~I~qyLle--~gAD----vn~ks~kGNTALH~caEsG~vdivq~L 202 (615)
T KOG0508|consen 145 IANRHGHTCLMIACYKGHVDIAQYLLE--QGAD----VNAKSYKGNTALHDCAESGSVDIVQLL 202 (615)
T ss_pred ccccCCCeeEEeeeccCchHHHHHHHH--hCCC----cchhcccCchHHHhhhhcccHHHHHHH
Confidence 457788888888888888888888888 6654 788888888888888888887776655
No 50
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.69 E-value=1.1e-08 Score=85.91 Aligned_cols=60 Identities=15% Similarity=0.069 Sum_probs=50.3
Q ss_pred Ccccc-CCCCcHHhHHHHCCCHHHHHHHhhcch-hhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCD-ENRYTIFHIAVSNRQVELFKFIDADDM-KAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D-~~G~T~LH~Av~~~~~~iv~~Ll~~~~-~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+| .+|+||||+|+++++.+++++|++ . +. .+|.+|..|.||||+|+..++.+++++|
T Consensus 84 in~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~--~~g~----d~n~~~~~g~tpL~~A~~~~~~~i~~~L 145 (154)
T PHA02736 84 INGKERVFGNTPLHIAVYTQNYELATWLCN--QPGV----NMEILNYAFKTPYYVACERHDAKMMNIL 145 (154)
T ss_pred ccccCCCCCCcHHHHHHHhCCHHHHHHHHh--CCCC----CCccccCCCCCHHHHHHHcCCHHHHHHH
Confidence 35666 489999999999999999999997 3 33 2689999999999999999987766544
No 51
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.68 E-value=1.7e-08 Score=87.47 Aligned_cols=86 Identities=22% Similarity=0.236 Sum_probs=68.3
Q ss_pred ccccCCCCcHHhHHHHCCC-----HHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHH
Q 021201 2 WKCDENRYTIFHIAVSNRQ-----VELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRE 76 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~-----~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~e 76 (316)
+.+|..|.|+||+|+.+++ .+++++|++ .++..+ ..+.+|.+|+||||+|+..|+.+.+..+
T Consensus 100 ~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~--~g~~~~-~~~~~~~~g~tpl~~A~~~~~~~~~~~l---------- 166 (235)
T COG0666 100 NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLE--AGADLD-VNNLRDEDGNTPLHWAALNGDADIVELL---------- 166 (235)
T ss_pred ccccCCCCcHHHHHHhcCCcccchHHHHHHHHH--cCCCCC-CccccCCCCCchhHHHHHcCchHHHHHH----------
Confidence 5689999999999999999 999999999 665100 2577899999999999999997554333
Q ss_pred hhhHhHHHHhccchhhhhhccCCCCccccccch
Q 021201 77 LLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 77 l~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+-.+...+.+|..|.|+++.+...
T Consensus 167 ---------l~~~~~~~~~~~~g~t~l~~a~~~ 190 (235)
T COG0666 167 ---------LEAGADPNSRNSYGVTALDPAAKN 190 (235)
T ss_pred ---------HhcCCCCcccccCCCcchhhhccc
Confidence 112456677899999999987765
No 52
>PHA02795 ankyrin-like protein; Provisional
Probab=98.67 E-value=1.1e-08 Score=99.49 Aligned_cols=53 Identities=17% Similarity=0.174 Sum_probs=48.5
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP 59 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~ 59 (316)
|+.+|..|+||||+|+.+|+.+++++|++ .|++ +|.+|.+|+||||+|+..|+
T Consensus 214 IN~kD~~G~TpLh~Aa~~g~~eiVelLL~--~GAd----IN~~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 214 INQLDAGGRTLLYRAIYAGYIDLVSWLLE--NGAN----VNAVMSNGYTCLDVAVDRGS 266 (437)
T ss_pred cCcCCCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHcCC
Confidence 57789999999999999999999999999 7764 79999999999999999885
No 53
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.67 E-value=1.6e-08 Score=104.37 Aligned_cols=60 Identities=22% Similarity=0.195 Sum_probs=54.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+++++|
T Consensus 108 in~~d~~G~TpLh~Aa~~g~~eiv~~LL~--~Gad----vn~~d~~G~TpLh~A~~~g~~~iv~~L 167 (664)
T PTZ00322 108 PNCRDYDGRTPLHIACANGHVQVVRVLLE--FGAD----PTLLDKDGKTPLELAEENGFREVVQLL 167 (664)
T ss_pred CCCcCCCCCcHHHHHHHCCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHCCcHHHHHHH
Confidence 46789999999999999999999999999 7764 689999999999999999998877665
No 54
>PHA02795 ankyrin-like protein; Provisional
Probab=98.67 E-value=7.2e-09 Score=100.90 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=54.6
Q ss_pred CCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhc
Q 021201 8 RYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVV 87 (316)
Q Consensus 8 G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv 87 (316)
|.|++|.|.++++.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+.++.| +
T Consensus 188 ~~t~l~~a~~~~~~eIve~LIs--~GAD----IN~kD~~G~TpLh~Aa~~g~~eiVelL--------------------L 241 (437)
T PHA02795 188 QYTRGFLVDEPTVLEIYKLCIP--YIED----INQLDAGGRTLLYRAIYAGYIDLVSWL--------------------L 241 (437)
T ss_pred ccchhHHHHhcCHHHHHHHHHh--CcCC----cCcCCCCCCCHHHHHHHcCCHHHHHHH--------------------H
Confidence 5556666666666666666666 5543 678888888888888888876655443 2
Q ss_pred -cchhhhhhccCCCCccccccch
Q 021201 88 -PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 88 -~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++++.+|.+|.||++++...
T Consensus 242 ~~GAdIN~~d~~G~TpLh~Aa~~ 264 (437)
T PHA02795 242 ENGANVNAVMSNGYTCLDVAVDR 264 (437)
T ss_pred HCCCCCCCcCCCCCCHHHHHHHc
Confidence 3567899999999999998754
No 55
>PHA02884 ankyrin repeat protein; Provisional
Probab=98.64 E-value=1.5e-08 Score=94.62 Aligned_cols=56 Identities=11% Similarity=0.015 Sum_probs=44.0
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccc
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L 66 (316)
|..|+||||+|+++++.+++++|++ .|++ +|.+| ..|+||||+|+..++.+.++++
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~--~GAD----VN~~~~~~g~TpLh~Aa~~~~~eivklL 123 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIR--YGAD----VNRYAEEAKITPLYISVLHGCLKCLEIL 123 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----cCcccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4578888888888888888888888 7764 67764 5788888888888887776665
No 56
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.63 E-value=3.6e-08 Score=77.57 Aligned_cols=58 Identities=31% Similarity=0.410 Sum_probs=49.5
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
.+|.+|+||||+|+++++.+++++|++ .+.. .+..|..|.||||.|+..++.+.++.+
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~--~~~~----~~~~~~~g~~~l~~a~~~~~~~~~~~l 59 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLE--NGAD----VNAKDNDGRTPLHLAAKNGHLEIVKLL 59 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHH--cCCC----CCccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 467889999999999999999999999 6643 378999999999999999887655443
No 57
>PHA02798 ankyrin-like protein; Provisional
Probab=98.63 E-value=1.8e-08 Score=100.34 Aligned_cols=60 Identities=17% Similarity=0.201 Sum_probs=54.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
|+.+|..|+||||+|+.+|+.+++++|++ .|++ +|.+|.+|+||||+|+..++.++++.+
T Consensus 251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~--~GAd----in~~d~~G~TpL~~A~~~~~~~iv~~l 310 (489)
T PHA02798 251 INQVDELGFNPLYYSVSHNNRKIFEYLLQ--LGGD----INIITELGNTCLFTAFENESKFIFNSI 310 (489)
T ss_pred CCCcCcCCccHHHHHHHcCcHHHHHHHHH--cCCc----ccccCCCCCcHHHHHHHcCcHHHHHHH
Confidence 46789999999999999999999999999 7775 799999999999999999987776654
No 58
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.61 E-value=2.6e-08 Score=99.35 Aligned_cols=60 Identities=17% Similarity=0.228 Sum_probs=39.6
Q ss_pred CccccCCCCcHHhHHHHC---CCHHHHHHHhhcchhhhhhhhc-ccCCCCCChHHHHHhhh--CCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSN---RQVELFKFIDADDMKAIADLLV-DSTDGEGNNILHLAGKL--APPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~---~~~~iv~~Ll~~~~~~~~~~li-n~~D~~GnTpLHlAa~~--~~~~~v~~L 66 (316)
++.+|.+|+||||.|+.+ ++.+++++|++ .|++ + +.+|.+|+||||+|+.. ++.++++.|
T Consensus 101 in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~--~Gad----in~~~d~~g~tpLh~a~~~~~~~~~iv~~L 166 (494)
T PHA02989 101 INLKTFNGVSPIVCFIYNSNINNCDMLRFLLS--KGIN----VNDVKNSRGYNLLHMYLESFSVKKDVIKIL 166 (494)
T ss_pred CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHH--CCCC----cccccCCCCCCHHHHHHHhccCCHHHHHHH
Confidence 456677778888777655 46777788877 6653 5 56777777777777643 344444443
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=98.59 E-value=2.4e-08 Score=102.87 Aligned_cols=82 Identities=10% Similarity=0.070 Sum_probs=64.2
Q ss_pred ccccCCCCcHHhHHHHCCC-----------------------HHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhC
Q 021201 2 WKCDENRYTIFHIAVSNRQ-----------------------VELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLA 58 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~-----------------------~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~ 58 (316)
.+.|++|+||||.|++.++ .+++++|++ ++++ +|.+|.+|+||||+|+..+
T Consensus 390 ~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~--~GAd----IN~kd~~G~TpLh~Aa~~~ 463 (661)
T PHA02917 390 VNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLP--YLKD----INMIDKRGETLLHKAVRYN 463 (661)
T ss_pred cccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHH--CCCC----CCCCCCCCcCHHHHHHHcC
Confidence 4567789999999985433 467799999 7764 7999999999999999988
Q ss_pred CCCccccccCchHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccc
Q 021201 59 PPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 59 ~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+.+.++.| +-.+++++.+|..|+||++++..
T Consensus 464 ~~~~v~~L-------------------l~~GAdin~~d~~G~T~L~~A~~ 494 (661)
T PHA02917 464 KQSLVSLL-------------------LESGSDVNIRSNNGYTCIAIAIN 494 (661)
T ss_pred CHHHHHHH-------------------HHCcCCCCCCCCCCCCHHHHHHH
Confidence 75554333 11346789999999999998874
No 60
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.57 E-value=6.2e-08 Score=101.32 Aligned_cols=98 Identities=19% Similarity=0.216 Sum_probs=67.8
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC--------------CCCChHHHHHhhhCCCCccccc--cCc
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD--------------GEGNNILHLAGKLAPPDRLNVV--SGS 69 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D--------------~~GnTpLHlAa~~~~~~~v~~L--~ga 69 (316)
..|+||||+|+.+|+.+++++|++ ++++ +|.++ ..|.||||+|+..++.+.++++ .|+
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~--~GAd----v~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga 199 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLE--RGAS----VPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA 199 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHh--CCCC----CCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc
Confidence 469999999999999999999999 6654 34332 3699999999999999988876 454
Q ss_pred hHHhHHHhhhH-----------------------hHHHHhc-cchhh----hhhccCCCCccccccch
Q 021201 70 ALQMQRELLWF-----------------------QAVKKVV-PRKLA----EAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~-----------------------~~v~~lv-~~~~~----~~~N~~G~Tp~~l~~~~ 109 (316)
..+.+.+.+|. +.+.... ..... +.+|++|.||++++.+.
T Consensus 200 din~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~ 267 (743)
T TIGR00870 200 DILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKE 267 (743)
T ss_pred chhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhc
Confidence 45444332221 0011111 11122 67899999999988654
No 61
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.56 E-value=3.3e-08 Score=104.46 Aligned_cols=86 Identities=22% Similarity=0.292 Sum_probs=57.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhh---------------------------hhhhcccCCCCCChHHHH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAI---------------------------ADLLVDSTDGEGNNILHL 53 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~---------------------------~~~lin~~D~~GnTpLHl 53 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+.. ....+|.+|.+|+||||+
T Consensus 584 in~~d~~G~TpL~~A~~~g~~~iv~~L~~--~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~ 661 (823)
T PLN03192 584 VHIRDANGNTALWNAISAKHHKIFRILYH--FASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQV 661 (823)
T ss_pred CCCcCCCCCCHHHHHHHhCCHHHHHHHHh--cCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 46678899999998888888888887765 2210 001246666666666666
Q ss_pred HhhhCCCCccccccCchHHhHHHhhhHhHHHHhc-cchhhhhhccCC-CCccccccc
Q 021201 54 AGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVV-PRKLAEAKNKKG-LTPRALFSE 108 (316)
Q Consensus 54 Aa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv-~~~~~~~~N~~G-~Tp~~l~~~ 108 (316)
|+..|+.+++++| + .+++++.+|.+| .||.++...
T Consensus 662 A~~~g~~~iv~~L--------------------l~~GAdv~~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 662 AMAEDHVDMVRLL--------------------IMNGADVDKANTDDDFSPTELREL 698 (823)
T ss_pred HHHCCcHHHHHHH--------------------HHcCCCCCCCCCCCCCCHHHHHHH
Confidence 6666665544433 3 346677888887 888877644
No 62
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.54 E-value=2.8e-08 Score=75.37 Aligned_cols=69 Identities=25% Similarity=0.358 Sum_probs=53.5
Q ss_pred HhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccchh
Q 021201 12 FHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKL 91 (316)
Q Consensus 12 LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~ 91 (316)
||+|+++|+.+++++|++ .+.. ++. |+||||+|+..|+.++++.| ++ .+.+
T Consensus 1 L~~A~~~~~~~~~~~ll~--~~~~----~~~----~~~~l~~A~~~~~~~~~~~L----------------l~---~g~~ 51 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLE--KGAD----INL----GNTALHYAAENGNLEIVKLL----------------LE---NGAD 51 (89)
T ss_dssp HHHHHHTTTHHHHHHHHH--TTST----TTS----SSBHHHHHHHTTTHHHHHHH----------------HH---TTTC
T ss_pred CHHHHHcCCHHHHHHHHH--CcCC----CCC----CCCHHHHHHHcCCHHHHHHH----------------HH---hccc
Confidence 799999999999999999 6532 232 99999999999997665444 11 2356
Q ss_pred hhhhccCCCCccccccch
Q 021201 92 AEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 92 ~~~~N~~G~Tp~~l~~~~ 109 (316)
++.+|.+|.||++.+...
T Consensus 52 ~~~~~~~g~t~L~~A~~~ 69 (89)
T PF12796_consen 52 INSQDKNGNTALHYAAEN 69 (89)
T ss_dssp TT-BSTTSSBHHHHHHHT
T ss_pred ccccCCCCCCHHHHHHHc
Confidence 788889999999987654
No 63
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=98.51 E-value=7.2e-08 Score=102.39 Aligned_cols=60 Identities=22% Similarity=0.252 Sum_probs=55.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|+.|+||||.|+..|+.+++++|++ +|+. +|+.|.+|+||||+|+..|+.+.++.+
T Consensus 566 v~ak~~~G~TPLH~Aa~~G~~~i~~LLlk--~GA~----vna~d~~g~TpL~iA~~lg~~~~~k~l 625 (1143)
T KOG4177|consen 566 VNAKDKLGYTPLHQAAQQGHNDIAELLLK--HGAS----VNAADLDGFTPLHIAVRLGYLSVVKLL 625 (1143)
T ss_pred ccccCCCCCChhhHHHHcChHHHHHHHHH--cCCC----CCcccccCcchhHHHHHhcccchhhHH
Confidence 46789999999999999999999999999 8875 799999999999999999999887765
No 64
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.49 E-value=4.7e-08 Score=95.04 Aligned_cols=81 Identities=25% Similarity=0.234 Sum_probs=67.5
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
..+.+|.|.||+|+-+|..++.++|++ .+.. ++.+|.+|+||||.||.-|..+..++|
T Consensus 193 ~~~~rG~T~lHvAaa~Gy~e~~~lLl~--ag~~----~~~~D~dgWtPlHAAA~Wg~~~~~elL---------------- 250 (527)
T KOG0505|consen 193 ARHARGATALHVAAANGYTEVAALLLQ--AGYS----VNIKDYDGWTPLHAAAHWGQEDACELL---------------- 250 (527)
T ss_pred ccccccchHHHHHHhhhHHHHHHHHHH--hccC----cccccccCCCcccHHHHhhhHhHHHHH----------------
Confidence 345669999999999999999999999 7654 689999999999999999886654433
Q ss_pred HHHhccchhhhhhccCCCCccccccc
Q 021201 83 VKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 83 v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+ ...++.+++++.|+||+|++.+
T Consensus 251 ~---~~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 251 V---EHGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred H---HhhcccchhhhcCCCCccchhh
Confidence 1 1346788999999999999876
No 65
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.45 E-value=6.2e-08 Score=93.95 Aligned_cols=57 Identities=23% Similarity=0.284 Sum_probs=49.3
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
-|+.|-|+||-|+-.||.+||+||++ .+++ +|+.|.+|+||||.||.-++..+.+.|
T Consensus 579 pNdEGITaLHNAiCaghyeIVkFLi~--~gan----VNa~DSdGWTPLHCAASCNnv~~ckqL 635 (752)
T KOG0515|consen 579 PNDEGITALHNAICAGHYEIVKFLIE--FGAN----VNAADSDGWTPLHCAASCNNVPMCKQL 635 (752)
T ss_pred CCccchhHHhhhhhcchhHHHHHHHh--cCCc----ccCccCCCCchhhhhhhcCchHHHHHH
Confidence 36789999999999999999999999 7765 899999999999999998775544433
No 66
>PHA02730 ankyrin-like protein; Provisional
Probab=98.43 E-value=1.5e-07 Score=96.10 Aligned_cols=83 Identities=12% Similarity=0.024 Sum_probs=63.0
Q ss_pred CccccCCCCcHHhH---HHHCC---------CHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccC
Q 021201 1 MWKCDENRYTIFHI---AVSNR---------QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSG 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~---Av~~~---------~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~g 68 (316)
++.+|.+|+||||. |..++ ..+++++|++ .+++ +|++|..|+||||+|+..++.+.++.|
T Consensus 410 IN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs--~GAD----INakD~~G~TPLh~Aa~~~~~eive~L-- 481 (672)
T PHA02730 410 INHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK--YMDD----IDMIDNENKTLLYYAVDVNNIQFARRL-- 481 (672)
T ss_pred ccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHh--cccc----hhccCCCCCCHHHHHHHhCCHHHHHHH--
Confidence 45678899999994 44333 2257999999 8765 799999999999999999886554443
Q ss_pred chHHhHHHhhhHhHHHHhccchhhhhhcc-CCCCccccccc
Q 021201 69 SALQMQRELLWFQAVKKVVPRKLAEAKNK-KGLTPRALFSE 108 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~~~~~~~~N~-~G~Tp~~l~~~ 108 (316)
+-.+++++.+|+ .|+||++.+..
T Consensus 482 -----------------I~~GAdIN~~d~~~g~TaL~~Aa~ 505 (672)
T PHA02730 482 -----------------LEYGASVNTTSRSIINTAIQKSSY 505 (672)
T ss_pred -----------------HHCCCCCCCCCCcCCcCHHHHHHH
Confidence 113567888986 59999998764
No 67
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.41 E-value=7.9e-08 Score=96.76 Aligned_cols=60 Identities=27% Similarity=0.269 Sum_probs=53.7
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+|..|.+|-|+||.|+.+||.+++++|++ ..+. ++..|.+|.+|||+||+.|+.++++.+
T Consensus 42 ~n~qd~~gfTalhha~Lng~~~is~llle--~ea~----ldl~d~kg~~plhlaaw~g~~e~vkml 101 (854)
T KOG0507|consen 42 HNLQDYSGFTLLHHAVLNGQNQISKLLLD--YEAL----LDLCDTKGILPLHLAAWNGNLEIVKML 101 (854)
T ss_pred ccccCccchhHHHHHHhcCchHHHHHHhc--chhh----hhhhhccCcceEEehhhcCcchHHHHH
Confidence 47788999999999999999999999999 6653 578899999999999999999988765
No 68
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.41 E-value=6.1e-08 Score=90.44 Aligned_cols=110 Identities=19% Similarity=0.203 Sum_probs=76.7
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCC-----cccccc--C-----
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPD-----RLNVVS--G----- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~-----~v~~L~--g----- 68 (316)
||--|.+|.|+|||||.+.+.+||+.|+. .+.- .+|.+++-|.||..||+...-.. +|..|. |
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLD--SgvC---~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaK 335 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLD--SGVC---DVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAK 335 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhc--cCcc---cccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchh
Confidence 45679999999999999999999999999 6643 47999999999999998754322 222221 1
Q ss_pred ------chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch-hhhhhh
Q 021201 69 ------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ-HRDLKE 115 (316)
Q Consensus 69 ------aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~-~~~l~~ 115 (316)
.+|.+.-.=+..+.||.++. ++++|.+|.||-|++..+.+. |+++.+
T Consensus 336 AsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivk 390 (452)
T KOG0514|consen 336 ASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVK 390 (452)
T ss_pred hhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHH
Confidence 11111111122445665553 578999999999999988765 555544
No 69
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=98.39 E-value=1.6e-07 Score=79.70 Aligned_cols=83 Identities=16% Similarity=0.003 Sum_probs=64.8
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
+++...|+||||-|++..+.+++.+|++ .+++ +|++.+.-.||||+||...+...-
T Consensus 124 ~a~T~~GWTPLhSAckWnN~~va~~LLq--hgaD----VnA~t~g~ltpLhlaa~~rn~r~t------------------ 179 (228)
T KOG0512|consen 124 EAKTNEGWTPLHSACKWNNFEVAGRLLQ--HGAD----VNAQTKGLLTPLHLAAGNRNSRDT------------------ 179 (228)
T ss_pred ccccccCccchhhhhcccchhHHHHHHh--ccCc----ccccccccchhhHHhhcccchHHH------------------
Confidence 4677899999999999999999999999 7775 899999999999999987653210
Q ss_pred HHHHhcc--chhhhhhccCCCCccccccch
Q 021201 82 AVKKVVP--RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 82 ~v~~lv~--~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++-++. ......+|+.++||++++...
T Consensus 180 -~~~Ll~dryi~pg~~nn~eeta~~iARRT 208 (228)
T KOG0512|consen 180 -LELLLHDRYIHPGLKNNLEETAFDIARRT 208 (228)
T ss_pred -HHHHhhccccChhhhcCccchHHHHHHHh
Confidence 111221 233467889999999998765
No 70
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.38 E-value=2.4e-07 Score=96.92 Aligned_cols=109 Identities=17% Similarity=0.109 Sum_probs=72.8
Q ss_pred CccccCCCCcHHh-HHHHCCCHHHHHHHhhcch-----------------hhhhhhh---------------ccc----C
Q 021201 1 MWKCDENRYTIFH-IAVSNRQVELFKFIDADDM-----------------KAIADLL---------------VDS----T 43 (316)
Q Consensus 1 i~~~D~~G~T~LH-~Av~~~~~~iv~~Ll~~~~-----------------~~~~~~l---------------in~----~ 43 (316)
++..|..|+|||| .|+++++.+++++|++.+. +....++ .+. .
T Consensus 45 in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~ 124 (743)
T TIGR00870 45 INCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSE 124 (743)
T ss_pred CCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccc
Confidence 3456788999999 8889999999999987331 0000000 011 1
Q ss_pred CCCCChHHHHHhhhCCCCccccc--cCchHH-------------------------hHHHhhhHhHHHHhc-cchhhhhh
Q 021201 44 DGEGNNILHLAGKLAPPDRLNVV--SGSALQ-------------------------MQRELLWFQAVKKVV-PRKLAEAK 95 (316)
Q Consensus 44 D~~GnTpLHlAa~~~~~~~v~~L--~gaal~-------------------------~~~el~w~~~v~~lv-~~~~~~~~ 95 (316)
+..|.||||+|+..++.+++++| .|+.++ .....+..+.++.++ .+++++.+
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~ 204 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTA 204 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhH
Confidence 24699999999999999988876 344332 222333344455555 35678999
Q ss_pred ccCCCCccccccch
Q 021201 96 NKKGLTPRALFSEQ 109 (316)
Q Consensus 96 N~~G~Tp~~l~~~~ 109 (316)
|+.|.||++++..+
T Consensus 205 d~~g~T~Lh~A~~~ 218 (743)
T TIGR00870 205 DSLGNTLLHLLVME 218 (743)
T ss_pred hhhhhHHHHHHHhh
Confidence 99999999987654
No 71
>PHA02792 ankyrin-like protein; Provisional
Probab=98.36 E-value=1.4e-07 Score=95.35 Aligned_cols=46 Identities=13% Similarity=0.085 Sum_probs=26.7
Q ss_pred CCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCC--ChHHHHHhhhCC
Q 021201 8 RYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEG--NNILHLAGKLAP 59 (316)
Q Consensus 8 G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~G--nTpLHlAa~~~~ 59 (316)
+.+++|.|+.+|+.+++++|++ +|++ +|.+|.+| .||||.|+....
T Consensus 339 ~~n~~~~Aa~~gn~eIVelLIs--~GAD----IN~kD~~g~~~TpLh~A~~n~~ 386 (631)
T PHA02792 339 HINKYFQKFDNRDPKVVEYILK--NGNV----VVEDDDNIINIMPLFPTLSIHE 386 (631)
T ss_pred cchHHHHHHHcCCHHHHHHHHH--cCCc----hhhhcCCCCChhHHHHHHHhcc
Confidence 4555666666666666666666 5543 45555553 466666554443
No 72
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.33 E-value=1.3e-07 Score=82.91 Aligned_cols=99 Identities=14% Similarity=0.098 Sum_probs=61.8
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCchHHh---HHH
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGSALQM---QRE 76 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~gaal~~---~~e 76 (316)
++++--+++|+.+++...|.+++..+.+ + .+|+.|+.|.|||.+|+.+|+...+++| +|+..+. -+|
T Consensus 123 nevs~~p~s~~slsVhql~L~~~~~~~~--n------~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~re 194 (296)
T KOG0502|consen 123 NEVSLMPWSPLSLSVHQLHLDVVDLLVN--N------KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRE 194 (296)
T ss_pred CccccccCChhhHHHHHHHHHHHHHHhh--c------cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhh
Confidence 4556667777777777777666666655 3 2577777777777777777777777665 4543331 121
Q ss_pred --------hhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 77 --------LLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 77 --------l~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
-++.+.|+-++. ..++|..|-+|-||+-++..
T Consensus 195 sALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvr 235 (296)
T KOG0502|consen 195 SALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVR 235 (296)
T ss_pred hhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeec
Confidence 223444554443 35677788888888877654
No 73
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.31 E-value=6.6e-07 Score=55.47 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=28.7
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCC
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDG 45 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~ 45 (316)
+|+||||+|+++|+.+++++|++ .+++ ++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~--~ga~----~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLK--HGAD----INARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHH--TTSC----TTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHH--CcCC----CCCCCC
Confidence 59999999999999999999999 7764 577664
No 74
>PF13606 Ank_3: Ankyrin repeat
Probab=98.24 E-value=9.2e-07 Score=53.77 Aligned_cols=26 Identities=35% Similarity=0.475 Sum_probs=24.2
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKA 34 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~ 34 (316)
+|+||||+|+++|+.|++++|++ +++
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~--~ga 26 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLE--HGA 26 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHH--cCC
Confidence 59999999999999999999999 665
No 75
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.19 E-value=6.5e-07 Score=87.24 Aligned_cols=82 Identities=24% Similarity=0.279 Sum_probs=67.5
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
+..|.+|.|+||=|+.-.+.++|+++++ ++++ +|++|++|+||||-|+.-|+..++.++
T Consensus 67 ~~~n~DglTalhq~~id~~~e~v~~l~e--~ga~----Vn~~d~e~wtPlhaaascg~~~i~~~l--------------- 125 (527)
T KOG0505|consen 67 NLCNVDGLTALHQACIDDNLEMVKFLVE--NGAN----VNAQDNEGWTPLHAAASCGYLNIVEYL--------------- 125 (527)
T ss_pred cccCCccchhHHHHHhcccHHHHHHHHH--hcCC----ccccccccCCcchhhcccccHHHHHHH---------------
Confidence 5678999999999999999999999999 7765 899999999999999999997765443
Q ss_pred HHHHhccchhhhhhccCCCCccccccc
Q 021201 82 AVKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 82 ~v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+-.+++....|.+|..|.|+...
T Consensus 126 ----i~~gA~~~avNsdg~~P~dl~e~ 148 (527)
T KOG0505|consen 126 ----IQHGANLLAVNSDGNMPYDLAED 148 (527)
T ss_pred ----HHhhhhhhhccCCCCCccccccC
Confidence 11235666778888888877654
No 76
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.19 E-value=2.2e-07 Score=94.29 Aligned_cols=81 Identities=25% Similarity=0.239 Sum_probs=64.4
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCC-CCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDG-EGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~-~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
+.+|..|||+||+|+..++.++++.|++ +|.+ ++.+|+ .|.||||-|...|+.+++.+|-
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlq--hGid----v~vqD~ESG~taLHRaiyyG~idca~lLL------------- 106 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQ--HGID----VFVQDEESGYTALHRAIYYGNIDCASLLL------------- 106 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHh--cCce----eeeccccccchHhhHhhhhchHHHHHHHH-------------
Confidence 5578999999999999999999999999 7764 788995 7999999999999998876651
Q ss_pred hHHHHhccchhhhhhccCCCCcccccc
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFS 107 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~ 107 (316)
-.+.....+|++|..|++...
T Consensus 107 ------~~g~SL~i~Dkeglsplq~~~ 127 (1267)
T KOG0783|consen 107 ------SKGRSLRIKDKEGLSPLQFLS 127 (1267)
T ss_pred ------hcCCceEEecccCCCHHHHHh
Confidence 112344566777777766543
No 77
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.16 E-value=7.7e-07 Score=91.99 Aligned_cols=74 Identities=18% Similarity=0.105 Sum_probs=60.4
Q ss_pred HHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccch
Q 021201 11 IFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRK 90 (316)
Q Consensus 11 ~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~ 90 (316)
.||.|+.+|+.+.+++|++ .+++ +|.+|.+|+||||+|+..|+.++++.| ++ .+.
T Consensus 85 ~L~~aa~~G~~~~vk~LL~--~Gad----in~~d~~G~TpLh~Aa~~g~~eiv~~L----------------L~---~Ga 139 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLT--GGAD----PNCRDYDGRTPLHIACANGHVQVVRVL----------------LE---FGA 139 (664)
T ss_pred HHHHHHHcCCHHHHHHHHH--CCCC----CCCcCCCCCcHHHHHHHCCCHHHHHHH----------------HH---CCC
Confidence 4889999999999999999 7654 699999999999999999997766554 11 235
Q ss_pred hhhhhccCCCCccccccch
Q 021201 91 LAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 91 ~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.+|++|.||++++...
T Consensus 140 dvn~~d~~G~TpLh~A~~~ 158 (664)
T PTZ00322 140 DPTLLDKDGKTPLELAEEN 158 (664)
T ss_pred CCCCCCCCCCCHHHHHHHC
Confidence 6778888899998887654
No 78
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.16 E-value=6.9e-07 Score=90.85 Aligned_cols=81 Identities=21% Similarity=0.259 Sum_probs=60.6
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKV 86 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~l 86 (316)
.|+.||-.|+--+|.|+|++|++ .+++ +|++|.+|||.||.-+..-..++.+. +-+.
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~--~gAd----~~aqDS~GNTVLH~lVi~~~~~My~~-----------------~L~~ 295 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLA--HGAD----PNAQDSNGNTVLHMLVIHFVTEMYDL-----------------ALEL 295 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHh--cCCC----CCccccCCChHHHHHHHHHHHHHHHH-----------------HHhc
Confidence 38999999999999999999999 7775 79999999999999988632221111 1110
Q ss_pred ccchhhhhhccCCCCccccccchh
Q 021201 87 VPRKLAEAKNKKGLTPRALFSEQH 110 (316)
Q Consensus 87 v~~~~~~~~N~~G~Tp~~l~~~~~ 110 (316)
-.......+|++|.||+.++.+..
T Consensus 296 ga~~l~~v~N~qgLTPLtLAaklG 319 (782)
T KOG3676|consen 296 GANALEHVRNNQGLTPLTLAAKLG 319 (782)
T ss_pred CCCccccccccCCCChHHHHHHhh
Confidence 001235789999999999987653
No 79
>PHA02792 ankyrin-like protein; Provisional
Probab=98.09 E-value=2e-06 Score=87.13 Aligned_cols=60 Identities=7% Similarity=0.015 Sum_probs=51.7
Q ss_pred CccccCCCCcHHhHHHHCC-------CHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhC--CCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNR-------QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLA--PPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~-------~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~--~~~~v~~L 66 (316)
|+..|+.|+||||+|+.++ +.|+++.|++ +++. ++.+|+.|.||||+|+... ..+++++|
T Consensus 168 i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~--~g~~----~~~~d~~g~t~l~~~~~~~~i~~ei~~~L 236 (631)
T PHA02792 168 TDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLIS--HEKE----MRYYTYREHTTLYYYVDKCDIKREIFDAL 236 (631)
T ss_pred cccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHh--CCCC----cCccCCCCChHHHHHHHcccchHHHHHHH
Confidence 4567888999999999999 8999999999 7764 6889999999999999998 55666655
No 80
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.08 E-value=8.4e-07 Score=85.41 Aligned_cols=108 Identities=19% Similarity=0.185 Sum_probs=86.8
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
|+......|||--|+.-|+.++|+||++ ++++ ++..|..|+|.||+|+.+|+.++++.| .|
T Consensus 111 N~tT~TNStPLraACfDG~leivKyLvE--~gad----~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGN 184 (615)
T KOG0508|consen 111 NDTTRTNSTPLRAACFDGHLEIVKYLVE--HGAD----PEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGN 184 (615)
T ss_pred ccccccCCccHHHHHhcchhHHHHHHHH--cCCC----CcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCc
Confidence 4445556799999999999999999999 8775 688999999999999999999988776 22
Q ss_pred chHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccch-hhhhhh
Q 021201 69 SALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ-HRDLKE 115 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~-~~~l~~ 115 (316)
.+++.+.|.+..+.++.++.......+|..|.||+-.+... |.+.++
T Consensus 185 TALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe 232 (615)
T KOG0508|consen 185 TALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVE 232 (615)
T ss_pred hHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHH
Confidence 46777888888888888887666777888899999887654 444433
No 81
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.07 E-value=6.4e-07 Score=90.37 Aligned_cols=80 Identities=21% Similarity=0.245 Sum_probs=62.2
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.|.+|.+|||+|+.+|+.+++++++. ..+ .+|++..+|.||||+||..|+.+.+.+| +
T Consensus 78 ~d~kg~~plhlaaw~g~~e~vkmll~--q~d----~~na~~~e~~tplhlaaqhgh~dvv~~L----------------l 135 (854)
T KOG0507|consen 78 CDTKGILPLHLAAWNGNLEIVKMLLL--QTD----ILNAVNIENETPLHLAAQHGHLEVVFYL----------------L 135 (854)
T ss_pred hhccCcceEEehhhcCcchHHHHHHh--ccc----CCCcccccCcCccchhhhhcchHHHHHH----------------H
Confidence 46889999999999999999999998 432 2699999999999999999998877655 0
Q ss_pred HHhccchhhhhhccCCCCccccccc
Q 021201 84 KKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 84 ~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+ ..++.-++|+.++|++|++.+
T Consensus 136 ~---~~adp~i~nns~~t~ldlA~q 157 (854)
T KOG0507|consen 136 K---KNADPFIRNNSKETVLDLASR 157 (854)
T ss_pred h---cCCCccccCcccccHHHHHHH
Confidence 0 123445566667777766544
No 82
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.06 E-value=3.7e-06 Score=73.95 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=85.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--c-----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--S----------- 67 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~----------- 67 (316)
||..|+.|-|||.||+.+||..+|++|++ .|++ ++..-+.-.|+|.+|...|..+++++| .
T Consensus 153 VN~~De~GfTpLiWAaa~G~i~vV~fLL~--~GAd----p~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNG 226 (296)
T KOG0502|consen 153 VNACDEFGFTPLIWAAAKGHIPVVQFLLN--SGAD----PDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNG 226 (296)
T ss_pred ccCccccCchHhHHHHhcCchHHHHHHHH--cCCC----hhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCC
Confidence 57889999999999999999999999999 7765 456677888999999999999998876 1
Q ss_pred CchHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccchhhh
Q 021201 68 GSALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQHRD 112 (316)
Q Consensus 68 gaal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~~~~ 112 (316)
|.++-+...-++-+-+|.++. +++++..+..|.++++++......
T Consensus 227 gTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr 272 (296)
T KOG0502|consen 227 GTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR 272 (296)
T ss_pred CceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH
Confidence 233334444455677888875 578999999999999998765433
No 83
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=97.99 E-value=3.5e-06 Score=76.69 Aligned_cols=61 Identities=15% Similarity=0.131 Sum_probs=52.8
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|++|.|+|..|+..|+.+.+++|++ .+++- -..++..+.||||.||..|+.++-+++
T Consensus 38 vn~~D~sGMs~LahAaykGnl~~v~lll~--~gaDv---N~~qhg~~YTpLmFAALSGn~dvcrll 98 (396)
T KOG1710|consen 38 VNQRDPSGMSVLAHAAYKGNLTLVELLLE--LGADV---NDKQHGTLYTPLMFAALSGNQDVCRLL 98 (396)
T ss_pred hhccCCCcccHHHHHHhcCcHHHHHHHHH--hCCCc---CcccccccccHHHHHHHcCCchHHHHH
Confidence 36789999999999999999999999999 88752 245888999999999999998876655
No 84
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=97.86 E-value=1.3e-05 Score=69.26 Aligned_cols=85 Identities=22% Similarity=0.236 Sum_probs=64.3
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.+..+.+++|.|+..+..+++++++. .+.. ++.+|.+|.||||+|+..++.. ..+.+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~----~~~~~~~g~t~l~~a~~~~~~~---------------~~~~~~~ 127 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLA--SGAD----VNAKDADGDTPLHLAALNGNPP---------------EGNIEVA 127 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHH--cCCC----cccccCCCCcHHHHHHhcCCcc---------------cchHHHH
Confidence 45668999999999999999999998 6654 5899999999999999999841 1112223
Q ss_pred HHhcc-ch---hhhhhccCCCCccccccch
Q 021201 84 KKVVP-RK---LAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 84 ~~lv~-~~---~~~~~N~~G~Tp~~l~~~~ 109 (316)
+.++. .. ..+.+|.+|.||++.+...
T Consensus 128 ~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~ 157 (235)
T COG0666 128 KLLLEAGADLDVNNLRDEDGNTPLHWAALN 157 (235)
T ss_pred HHHHHcCCCCCCccccCCCCCchhHHHHHc
Confidence 33332 23 4566799999999987654
No 85
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=97.83 E-value=1.8e-05 Score=61.91 Aligned_cols=59 Identities=29% Similarity=0.384 Sum_probs=50.4
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+..|..|.|+||.|+..++.+++++|++ .+.. ++..|..|.||+|.|+..++.++++.|
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~--~~~~----~~~~~~~~~~~l~~a~~~~~~~~~~~L 92 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLE--KGAD----VNARDKDGNTPLHLAARNGNLDVVKLL 92 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHH--cCCC----ccccCCCCCCHHHHHHHcCcHHHHHHH
Confidence 3568899999999999999999999999 6542 578889999999999999987776655
No 86
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.81 E-value=2.1e-05 Score=76.85 Aligned_cols=58 Identities=24% Similarity=0.182 Sum_probs=51.7
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLN 64 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~ 64 (316)
|..+|..|+||||+||.-|+.+.++.|+. .+++ +..+|++|++|||.|+..|+.+++.
T Consensus 48 id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~--a~Ad----v~~kN~~gWs~L~EAv~~g~~q~i~ 105 (560)
T KOG0522|consen 48 IDRRDPPGRTPLHLAVRLGHVEAARILLS--AGAD----VSIKNNEGWSPLHEAVSTGNEQIIT 105 (560)
T ss_pred eccccCCCCccHHHHHHhcCHHHHHHHHh--cCCC----ccccccccccHHHHHHHcCCHHHHH
Confidence 46789999999999999999999999999 7664 6789999999999999999976553
No 87
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=97.71 E-value=3.2e-05 Score=53.20 Aligned_cols=28 Identities=29% Similarity=0.415 Sum_probs=21.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHh
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFID 28 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll 28 (316)
++.+|.+|+||||+|+++|+.+++++|+
T Consensus 27 in~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 27 INAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 4678999999999999999999999985
No 88
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.68 E-value=2.9e-05 Score=75.22 Aligned_cols=87 Identities=23% Similarity=0.281 Sum_probs=65.3
Q ss_pred ccCCCCcH------HhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccccCchHHhHHH
Q 021201 4 CDENRYTI------FHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRE 76 (316)
Q Consensus 4 ~D~~G~T~------LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~e 76 (316)
+|++|-+. ||-.|+.|+.++.--|+. .|++ .|-.+ +.|+||||.||+.|+...+++|
T Consensus 123 rDdD~~~~~~LsrQLhasvRt~nlet~LRll~--lGA~----~N~~hpekg~TpLHvAAk~Gq~~Q~ElL---------- 186 (669)
T KOG0818|consen 123 RDDDSVTAKDLSKQLHSSVRTGNLETCLRLLS--LGAQ----ANFFHPEKGNTPLHVAAKAGQILQAELL---------- 186 (669)
T ss_pred CCcchhhHHHHHHHHHHHhhcccHHHHHHHHH--cccc----cCCCCcccCCchhHHHHhccchhhhhHH----------
Confidence 35555554 899999999998887877 6664 46666 5899999999999997665554
Q ss_pred hhhHhHHHHhccchhhhhhccCCCCccccccch-hhhhhh
Q 021201 77 LLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ-HRDLKE 115 (316)
Q Consensus 77 l~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~-~~~l~~ 115 (316)
.+=++++...|.+|.||.+++... |.++-+
T Consensus 187 ---------~vYGAD~~a~d~~GmtP~~~AR~~gH~~lae 217 (669)
T KOG0818|consen 187 ---------AVYGADPGAQDSSGMTPVDYARQGGHHELAE 217 (669)
T ss_pred ---------hhccCCCCCCCCCCCcHHHHHHhcCchHHHH
Confidence 123467889999999999998764 544443
No 89
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.68 E-value=1.7e-05 Score=77.90 Aligned_cols=84 Identities=19% Similarity=0.244 Sum_probs=63.2
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
-++.+.++.||+|++.|+-+||+|++. ++.- + ++++.|+.|.|+||-||-.++..+..++.
T Consensus 894 ~~~~~~~sllh~a~~tg~~eivkyild--h~p~-e-lld~~de~get~lhkaa~~~~r~vc~~lv--------------- 954 (1004)
T KOG0782|consen 894 IQGPDHCSLLHYAAKTGNGEIVKYILD--HGPS-E-LLDMADETGETALHKAACQRNRAVCQLLV--------------- 954 (1004)
T ss_pred eeCcchhhHHHHHHhcCChHHHHHHHh--cCCH-H-HHHHHhhhhhHHHHHHHHhcchHHHHHHH---------------
Confidence 357788999999999999999999999 5432 2 36899999999999999988755443331
Q ss_pred HHHhccchhhhhhccCCCCccccccch
Q 021201 83 VKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 83 v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+ .++.....|.+|+||.+-+++.
T Consensus 955 -d---agasl~ktd~kg~tp~eraqqa 977 (1004)
T KOG0782|consen 955 -D---AGASLRKTDSKGKTPQERAQQA 977 (1004)
T ss_pred -h---cchhheecccCCCChHHHHHhc
Confidence 0 1234456688899998766543
No 90
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.55 E-value=3.1e-05 Score=79.03 Aligned_cols=80 Identities=21% Similarity=0.248 Sum_probs=59.6
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhh-----hhcccCCC--------------CCChHHHHHhhhCCCCccccc
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIAD-----LLVDSTDG--------------EGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~-----~lin~~D~--------------~GnTpLHlAa~~~~~~~v~~L 66 (316)
-.|+||||+|+.+++.+.|++|++ .+++-+ ......|. -|..||-+||-.++++++++|
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~--~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL 259 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLA--AGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL 259 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHH--cCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence 359999999999999999999999 554311 01122222 467899999999999988776
Q ss_pred cCchHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccc
Q 021201 67 SGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALF 106 (316)
Q Consensus 67 ~gaal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~ 106 (316)
++ .+++++++|.+|.|-+|+.
T Consensus 260 ----------------l~---~gAd~~aqDS~GNTVLH~l 280 (782)
T KOG3676|consen 260 ----------------LA---HGADPNAQDSNGNTVLHML 280 (782)
T ss_pred ----------------Hh---cCCCCCccccCCChHHHHH
Confidence 11 4567788888888888764
No 91
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.42 E-value=3e-05 Score=74.86 Aligned_cols=61 Identities=21% Similarity=0.235 Sum_probs=50.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|-+.||+||+|+..|+.+++++|++.+. ...+.+|..|+|||.=|-..++.+++++|
T Consensus 532 ~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k-----v~~~~kDRw~rtPlDdA~~F~h~~v~k~L 592 (622)
T KOG0506|consen 532 LETKDYDDRTALHVAAAEGHVEVVKFLLNACK-----VDPDPKDRWGRTPLDDAKHFKHKEVVKLL 592 (622)
T ss_pred ccccccccchhheeecccCceeHHHHHHHHHc-----CCCChhhccCCCcchHhHhcCcHHHHHHH
Confidence 35678899999999999999999999998322 23688999999999999999998877665
No 92
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.28 E-value=0.00012 Score=72.15 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=49.7
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+.+|+|+||+|++.|+..+.++|+- .+.+ +.+.|.+|+|+|.+|-..|..+++.+|
T Consensus 658 ~~~grt~LHLa~~~gnVvl~QLLiW--yg~d----v~~rda~g~t~l~yar~a~sqec~d~l 713 (749)
T KOG0705|consen 658 EGDGRTALHLAARKGNVVLAQLLIW--YGVD----VMARDAHGRTALFYARQAGSQECIDVL 713 (749)
T ss_pred CCCCcchhhhhhhhcchhHHHHHHH--hCcc----ceecccCCchhhhhHhhcccHHHHHHH
Confidence 5679999999999999999999997 7764 678999999999999999987776655
No 93
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.23 E-value=0.00017 Score=75.46 Aligned_cols=79 Identities=18% Similarity=0.144 Sum_probs=66.0
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHH
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKK 85 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~ 85 (316)
..|.|+||.|+.++...++++|++ .+++ +|+.|..|+||||.+...|+.....++.
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~--~ga~----vn~~d~~g~~plh~~~~~g~~~~~~~ll------------------ 709 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQ--NGAD----VNALDSKGRTPLHHATASGHTSIACLLL------------------ 709 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHh--cCCc----chhhhccCCCcchhhhhhcccchhhhhc------------------
Confidence 357999999999999999999999 7775 7999999999999999999977665541
Q ss_pred hccchhhhhhccCCCCccccccch
Q 021201 86 VVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 86 lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
-+.+..++.|.+|++|++++.+.
T Consensus 710 -~~~a~~~a~~~~~~~~l~~a~~~ 732 (785)
T KOG0521|consen 710 -KRGADPNAFDPDGKLPLDIAMEA 732 (785)
T ss_pred -cccccccccCccCcchhhHHhhh
Confidence 13456788899999999987543
No 94
>PF13606 Ank_3: Ankyrin repeat
Probab=97.20 E-value=7.6e-05 Score=45.24 Aligned_cols=21 Identities=29% Similarity=0.379 Sum_probs=18.5
Q ss_pred CCChHHHHHhhhCCCCccccc
Q 021201 46 EGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 46 ~GnTpLHlAa~~~~~~~v~~L 66 (316)
+|+||||+|++.|+.++++.|
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~L 21 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYL 21 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHH
Confidence 699999999999998877665
No 95
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=97.18 E-value=6.4e-05 Score=46.35 Aligned_cols=21 Identities=33% Similarity=0.615 Sum_probs=18.1
Q ss_pred CCChHHHHHhhhCCCCccccc
Q 021201 46 EGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 46 ~GnTpLHlAa~~~~~~~v~~L 66 (316)
+|+||||+|+..++.++++.|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~L 21 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLL 21 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHH
Confidence 699999999999998776655
No 96
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.11 E-value=0.00025 Score=61.19 Aligned_cols=61 Identities=16% Similarity=0.112 Sum_probs=53.7
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
||.+|..|+|+|..|+..|+.+++.||++ ++.- .+-..|..|++++.+|-+.|..+.+..|
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyllg--rg~a---~vgv~d~ssldaaqlaek~g~~~fvh~l 65 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYLLG--RGVA---FVGVTDESSLDAAQLAEKGGAQAFVHSL 65 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHHhc--cCcc---cccccccccchHHHHHHhcChHHHHHHH
Confidence 68999999999999999999999999999 7731 3678999999999999999987766544
No 97
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.04 E-value=0.0002 Score=70.13 Aligned_cols=75 Identities=23% Similarity=0.266 Sum_probs=53.2
Q ss_pred HHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccch
Q 021201 11 IFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRK 90 (316)
Q Consensus 11 ~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~ 90 (316)
++|+++.....+=.+..+. ... ...++.+|..|+||||+|+..|+.+..++| +..++
T Consensus 23 ~lh~~~~~~~~~sl~~el~--~~~--~~~id~~D~~g~TpLhlAV~Lg~~~~a~~L-------------------l~a~A 79 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELL--AKV--SLVIDRRDPPGRTPLHLAVRLGHVEAARIL-------------------LSAGA 79 (560)
T ss_pred ccchhhhccchhhHHHHHh--hhh--hceeccccCCCCccHHHHHHhcCHHHHHHH-------------------HhcCC
Confidence 4899988776654444433 221 123689999999999999999997655443 12346
Q ss_pred hhhhhccCCCCccccccc
Q 021201 91 LAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 91 ~~~~~N~~G~Tp~~l~~~ 108 (316)
++..+|++|++|++-+..
T Consensus 80 dv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 80 DVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred CccccccccccHHHHHHH
Confidence 778899999999886543
No 98
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.03 E-value=0.00049 Score=66.96 Aligned_cols=54 Identities=17% Similarity=0.130 Sum_probs=48.1
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccc
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNV 65 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~ 65 (316)
+.|.||||+|++.|+..-+++|.- .|++ +++.|.+|.||+-+|-..||-+....
T Consensus 165 ekg~TpLHvAAk~Gq~~Q~ElL~v--YGAD----~~a~d~~GmtP~~~AR~~gH~~laeR 218 (669)
T KOG0818|consen 165 EKGNTPLHVAAKAGQILQAELLAV--YGAD----PGAQDSSGMTPVDYARQGGHHELAER 218 (669)
T ss_pred ccCCchhHHHHhccchhhhhHHhh--ccCC----CCCCCCCCCcHHHHHHhcCchHHHHH
Confidence 469999999999999999999998 8875 79999999999999999999765443
No 99
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.54 E-value=0.0012 Score=64.07 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=61.8
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
++.++...+.+|+++|.....+-+.- .+.+ ++.+|.+..|+||.||..|+.++++.| +
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l--~g~D----~~~~DyD~RTaLHvAAaEG~v~v~kfl----------------~ 559 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFAL--QGMD----LETKDYDDRTALHVAAAEGHVEVVKFL----------------L 559 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHH--hccc----ccccccccchhheeecccCceeHHHHH----------------H
Confidence 35567788999999999998876655 4433 689999999999999999998877665 1
Q ss_pred HHhccchhhhhhccCCCCccccccc
Q 021201 84 KKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 84 ~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+. -..+.+.+|.-|.||+|=+..
T Consensus 560 ~~--~kv~~~~kDRw~rtPlDdA~~ 582 (622)
T KOG0506|consen 560 NA--CKVDPDPKDRWGRTPLDDAKH 582 (622)
T ss_pred HH--HcCCCChhhccCCCcchHhHh
Confidence 10 013457889999999986543
No 100
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=96.29 E-value=0.0026 Score=62.57 Aligned_cols=73 Identities=16% Similarity=0.078 Sum_probs=56.8
Q ss_pred HhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccchh
Q 021201 12 FHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKL 91 (316)
Q Consensus 12 LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~ 91 (316)
|.=|+..|-.|+|+-++. .-. +....+++|-|+||-|.-.||.++|++| ++ -+.+
T Consensus 554 LLDaaLeGEldlVq~~i~--ev~----DpSqpNdEGITaLHNAiCaghyeIVkFL----------------i~---~gan 608 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIY--EVT----DPSQPNDEGITALHNAICAGHYEIVKFL----------------IE---FGAN 608 (752)
T ss_pred HHhhhhcchHHHHHHHHH--hhc----CCCCCCccchhHHhhhhhcchhHHHHHH----------------Hh---cCCc
Confidence 344788899999987765 322 2567889999999999999998887665 11 2467
Q ss_pred hhhhccCCCCccccccch
Q 021201 92 AEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 92 ~~~~N~~G~Tp~~l~~~~ 109 (316)
+|+.|.||+||+|.+...
T Consensus 609 VNa~DSdGWTPLHCAASC 626 (752)
T KOG0515|consen 609 VNAADSDGWTPLHCAASC 626 (752)
T ss_pred ccCccCCCCchhhhhhhc
Confidence 899999999999998654
No 101
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=96.02 E-value=0.0072 Score=46.59 Aligned_cols=46 Identities=15% Similarity=0.085 Sum_probs=38.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILH 52 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLH 52 (316)
|+++|+.|-|||.-|+..||.+.|++|++ +++++ ...-.+|.+.+.
T Consensus 60 i~~kDKygITPLLsAvwEGH~~cVklLL~--~GAdr----t~~~PdG~~~~e 105 (117)
T KOG4214|consen 60 IQDKDKYGITPLLSAVWEGHRDCVKLLLQ--NGADR----TIHAPDGTALIE 105 (117)
T ss_pred cCCccccCCcHHHHHHHHhhHHHHHHHHH--cCccc----ceeCCCchhHHh
Confidence 67899999999999999999999999999 88763 345566766544
No 102
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.82 E-value=0.007 Score=63.85 Aligned_cols=84 Identities=11% Similarity=0.070 Sum_probs=63.6
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhc-chhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDAD-DMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~-~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
+...-.|++.+|+++..++...++-++++ +.+ .+..|.+|...+|++|..|..-.+.++
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~------~~eld~d~qgV~hfca~lg~ewA~ll~-------------- 627 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG------DLELDRDGQGVIHFCAALGYEWAFLPI-------------- 627 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccC------chhhcccCCChhhHhhhcCCceeEEEE--------------
Confidence 45667899999999999999999999985 332 367889999999997776664333222
Q ss_pred hHHHHhccchhhhhhccCCCCccccccchh
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFSEQH 110 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~~ 110 (316)
...+..++.+|.+|+||+|++....
T Consensus 628 -----~~~~~ai~i~D~~G~tpL~wAa~~G 652 (975)
T KOG0520|consen 628 -----SADGVAIDIRDRNGWTPLHWAAFRG 652 (975)
T ss_pred -----eecccccccccCCCCcccchHhhcC
Confidence 1234567889999999999988763
No 103
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.65 E-value=0.015 Score=32.44 Aligned_cols=23 Identities=26% Similarity=0.397 Sum_probs=21.7
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDA 29 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~ 29 (316)
+|.|++|+|++.++.+++++|++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~ 23 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLD 23 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH
Confidence 48899999999999999999998
No 104
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=95.54 E-value=0.0062 Score=60.53 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=55.5
Q ss_pred HhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccchh
Q 021201 12 FHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKL 91 (316)
Q Consensus 12 LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~ 91 (316)
|.-|+.......+-+|+. ++...+..-..-|.+|.|+||||+..|+.....+ +.|+. .+
T Consensus 628 Ll~A~~~~Dl~t~~lLLA--hg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QL-----------LiWyg--------~d 686 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLA--HGSREEVNETCGEGDGRTALHLAARKGNVVLAQL-----------LIWYG--------VD 686 (749)
T ss_pred HHHHHHHHHHHHHHHHHh--ccCchhhhccccCCCCcchhhhhhhhcchhHHHH-----------HHHhC--------cc
Confidence 455676666777778888 6665554445567788999999999998543322 34654 47
Q ss_pred hhhhccCCCCccccccch
Q 021201 92 AEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 92 ~~~~N~~G~Tp~~l~~~~ 109 (316)
+..+|.+|.|++..+...
T Consensus 687 v~~rda~g~t~l~yar~a 704 (749)
T KOG0705|consen 687 VMARDAHGRTALFYARQA 704 (749)
T ss_pred ceecccCCchhhhhHhhc
Confidence 788999999998877654
No 105
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=95.31 E-value=0.007 Score=64.35 Aligned_cols=94 Identities=17% Similarity=0.098 Sum_probs=61.1
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccC--chHHhHHH--------
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSG--SALQMQRE-------- 76 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~g--aal~~~~e-------- 76 (316)
+-+|+|-.|+..||.|++++|+. +++. +...|..|.+||-+|+-.||..++..|-+ +++.-|.+
T Consensus 756 n~~t~LT~acaggh~e~vellv~--rgan----iehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lS 829 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLVV--RGAN----IEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLS 829 (2131)
T ss_pred cccccccccccCccHHHHHHHHH--hccc----ccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEE
Confidence 45788888899999999998888 6654 46788888888888888888877776633 33333322
Q ss_pred ----hhhHhHHHHhcc-chhhhhhccCCCCccccc
Q 021201 77 ----LLWFQAVKKVVP-RKLAEAKNKKGLTPRALF 106 (316)
Q Consensus 77 ----l~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~ 106 (316)
-+.++.|+.++. ....+.||-...||+.++
T Consensus 830 lacsggr~~vvelLl~~gankehrnvsDytPlsla 864 (2131)
T KOG4369|consen 830 LACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLA 864 (2131)
T ss_pred EecCCCcchHHHHHHHhhccccccchhhcCchhhh
Confidence 112344444432 244455555555665554
No 106
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=95.27 E-value=0.014 Score=61.58 Aligned_cols=67 Identities=16% Similarity=0.077 Sum_probs=47.5
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhh--cccCCCCCChHHHHHhhhCCCCccccccCc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLL--VDSTDGEGNNILHLAGKLAPPDRLNVVSGS 69 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~l--in~~D~~GnTpLHlAa~~~~~~~v~~L~ga 69 (316)
|+-+|.+||||||||+.+|+++++.-|++ .++....+ .+..+-.|.|+--+|..+|+..+-..++..
T Consensus 634 i~i~D~~G~tpL~wAa~~G~e~l~a~l~~--lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~ 702 (975)
T KOG0520|consen 634 IDIRDRNGWTPLHWAAFRGREKLVASLIE--LGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK 702 (975)
T ss_pred cccccCCCCcccchHhhcCHHHHHHHHHH--hccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence 45678889999999999999998888886 44332222 244555788888888888887665555433
No 107
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=95.04 E-value=0.016 Score=53.24 Aligned_cols=57 Identities=11% Similarity=0.144 Sum_probs=49.3
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
.+..+.||||.|+..|+.++.++|++ .|+. ....+.-|.|+-.+||.-|+.+++.++
T Consensus 75 qhg~~YTpLmFAALSGn~dvcrllld--aGa~----~~~vNsvgrTAaqmAAFVG~H~CV~iI 131 (396)
T KOG1710|consen 75 QHGTLYTPLMFAALSGNQDVCRLLLD--AGAR----MYLVNSVGRTAAQMAAFVGHHECVAII 131 (396)
T ss_pred cccccccHHHHHHHcCCchHHHHHHh--ccCc----cccccchhhhHHHHHHHhcchHHHHHH
Confidence 35668999999999999999999999 7764 355678899999999999999988765
No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=94.92 E-value=0.008 Score=62.22 Aligned_cols=64 Identities=22% Similarity=0.192 Sum_probs=47.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchh----------------hhhhhhcccC----------------CCCCC
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMK----------------AIADLLVDST----------------DGEGN 48 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~----------------~~~~~lin~~----------------D~~Gn 48 (316)
||-+|.-|+++||+|++|.+.|+.++|++ .+ ..-+.+++.+ -..+-
T Consensus 55 inc~d~lGr~al~iai~nenle~~eLLl~--~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~di 132 (822)
T KOG3609|consen 55 INCRDPLGRLALHIAIDNENLELQELLLD--TSSEEGDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDI 132 (822)
T ss_pred hhccChHhhhceecccccccHHHHHHHhc--CccccchHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCc
Confidence 45678899999999999999999999998 43 1111122221 12467
Q ss_pred hHHHHHhhhCCCCccccc
Q 021201 49 NILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 49 TpLHlAa~~~~~~~v~~L 66 (316)
|||.+||..++.|+++.|
T Consensus 133 tPliLAAh~NnyEil~~L 150 (822)
T KOG3609|consen 133 TPLMLAAHLNNFEILQCL 150 (822)
T ss_pred cHHHHHHHhcchHHHHHH
Confidence 999999999999988776
No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=93.45 E-value=0.035 Score=58.45 Aligned_cols=57 Identities=19% Similarity=0.133 Sum_probs=50.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRL 63 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v 63 (316)
|+.+|..|+||||.+...|+...+..+++ ++++ .++.|.+|.+||++|....+.+.+
T Consensus 682 vn~~d~~g~~plh~~~~~g~~~~~~~ll~--~~a~----~~a~~~~~~~~l~~a~~~~~~d~~ 738 (785)
T KOG0521|consen 682 VNALDSKGRTPLHHATASGHTSIACLLLK--RGAD----PNAFDPDGKLPLDIAMEAANADIV 738 (785)
T ss_pred chhhhccCCCcchhhhhhcccchhhhhcc--cccc----ccccCccCcchhhHHhhhccccHH
Confidence 57889999999999999999999999999 8775 588999999999999887665544
No 110
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=93.40 E-value=0.033 Score=59.51 Aligned_cols=53 Identities=13% Similarity=-0.005 Sum_probs=30.5
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccc
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLN 64 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~ 64 (316)
+.|-.||.+|.++||...+..|++ .+.+ +|++- .+-||+|-+|...|..+.+.
T Consensus 890 klgisPLmlatmngh~~at~~ll~--~gsd----iNaqIeTNrnTaltla~fqgr~evv~ 943 (2131)
T KOG4369|consen 890 KLGISPLMLATMNGHQAATLSLLQ--PGSD----INAQIETNRNTALTLALFQGRPEVVF 943 (2131)
T ss_pred ccCcchhhhhhhccccHHHHHHhc--ccch----hccccccccccceeeccccCcchHHH
Confidence 346677777777777777777777 3332 33322 24455555555555555443
No 111
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=93.34 E-value=0.084 Score=54.92 Aligned_cols=50 Identities=20% Similarity=0.274 Sum_probs=42.2
Q ss_pred ccC-CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC
Q 021201 4 CDE-NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP 59 (316)
Q Consensus 4 ~D~-~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~ 59 (316)
.|+ .|+||||-|..+|+.|.+.+|++ ++.- +..+|++|-.||.+-.+-.+
T Consensus 81 qD~ESG~taLHRaiyyG~idca~lLL~--~g~S----L~i~Dkeglsplq~~~r~~~ 131 (1267)
T KOG0783|consen 81 QDEESGYTALHRAIYYGNIDCASLLLS--KGRS----LRIKDKEGLSPLQFLSRVLS 131 (1267)
T ss_pred ccccccchHhhHhhhhchHHHHHHHHh--cCCc----eEEecccCCCHHHHHhhccc
Confidence 344 59999999999999999999999 6642 57899999999999888433
No 112
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=91.69 E-value=0.11 Score=49.49 Aligned_cols=49 Identities=16% Similarity=0.177 Sum_probs=41.3
Q ss_pred HhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 12 FHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 12 LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
|-.|++.|..+.|++|++ .|.. +|+.|...+.||.+|..-||...+++|
T Consensus 40 lceacR~GD~d~v~~LVe--tgvn----VN~vD~fD~spL~lAsLcGHe~vvklL 88 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVE--TGVN----VNAVDRFDSSPLYLASLCGHEDVVKLL 88 (516)
T ss_pred HHHHhhcccHHHHHHHHH--hCCC----cchhhcccccHHHHHHHcCcHHHHHHH
Confidence 667888999999999998 6654 788999999999999999988877766
No 113
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=91.37 E-value=0.12 Score=51.69 Aligned_cols=57 Identities=23% Similarity=0.251 Sum_probs=49.1
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccc
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNV 65 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~ 65 (316)
..|+.|+|+||-|+-.|+..+..+|++ .++- +...|.+|.||=.-|-+.++++...+
T Consensus 929 ~~de~get~lhkaa~~~~r~vc~~lvd--agas----l~ktd~kg~tp~eraqqa~d~dlaay 985 (1004)
T KOG0782|consen 929 MADETGETALHKAACQRNRAVCQLLVD--AGAS----LRKTDSKGKTPQERAQQAGDPDLAAY 985 (1004)
T ss_pred HHhhhhhHHHHHHHHhcchHHHHHHHh--cchh----heecccCCCChHHHHHhcCCchHHHH
Confidence 457899999999999999999999999 7653 47899999999999999998775433
No 114
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.61 E-value=0.17 Score=49.90 Aligned_cols=45 Identities=20% Similarity=0.219 Sum_probs=38.9
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHh
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAG 55 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa 55 (316)
|..--|+||+|+.+|..+.|.++++ .+.+ ...+|..|.||..+++
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Le--eg~D----p~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLE--EGCD----PSTKDGAGRTPYSLSA 471 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHH--hcCC----chhcccCCCCcccccc
Confidence 3345799999999999999999999 6643 6789999999999987
No 115
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=89.96 E-value=0.15 Score=50.23 Aligned_cols=69 Identities=14% Similarity=0.160 Sum_probs=43.6
Q ss_pred HHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccchhhhhhccCCC
Q 021201 21 VELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGL 100 (316)
Q Consensus 21 ~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~~~~~N~~G~ 100 (316)
.+.+++|.+.+...+.++-....|.---|+||+|+..|..+++..+ ++ ..++..++|..|+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~----------------Le---eg~Dp~~kd~~Gr 464 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYF----------------LE---EGCDPSTKDGAGR 464 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHH----------------HH---hcCCchhcccCCC
Confidence 3455666662222222222345666678999999999986655433 12 2367788999999
Q ss_pred Cccccccc
Q 021201 101 TPRALFSE 108 (316)
Q Consensus 101 Tp~~l~~~ 108 (316)
||+++..+
T Consensus 465 tpy~ls~n 472 (591)
T KOG2505|consen 465 TPYSLSAN 472 (591)
T ss_pred Cccccccc
Confidence 99988654
No 116
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=85.39 E-value=1 Score=43.26 Aligned_cols=33 Identities=15% Similarity=0.067 Sum_probs=30.6
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhh
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAI 35 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~ 35 (316)
||.+|....+||.+|...||+++|++|++ +|+.
T Consensus 62 VN~vD~fD~spL~lAsLcGHe~vvklLLe--nGAi 94 (516)
T KOG0511|consen 62 VNAVDRFDSSPLYLASLCGHEDVVKLLLE--NGAI 94 (516)
T ss_pred cchhhcccccHHHHHHHcCcHHHHHHHHH--cCCc
Confidence 68899999999999999999999999999 7763
No 117
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=83.38 E-value=0.67 Score=40.70 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=39.5
Q ss_pred cCCCCcHHhHHHHCCCHHHHH-HHhhcchhhhhhhhcccCCCCCChHHHHHhhh
Q 021201 5 DENRYTIFHIAVSNRQVELFK-FIDADDMKAIADLLVDSTDGEGNNILHLAGKL 57 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~-~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~ 57 (316)
|.+-++|||-|++-++++++- |+++ +.+.-+-++|..|.+|..+|.+|-..
T Consensus 219 d~kTe~~LHk~iki~REDVl~LYfie--~dakiP~~LNd~D~nG~~ALdiAL~~ 270 (280)
T KOG4591|consen 219 DGKTENPLHKAIKIEREDVLFLYFIE--MDAKIPGILNDADHNGALALDIALCR 270 (280)
T ss_pred cCCCcchhHHhhhccccceeeehhhh--ccccccccccccCCCchHHHHHHHHH
Confidence 667789999999999999874 5666 44333334699999999999998653
No 118
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=82.00 E-value=0.49 Score=41.27 Aligned_cols=27 Identities=15% Similarity=0.194 Sum_probs=24.2
Q ss_pred cccCCCCCChHHHHHhhhCCCCccccc
Q 021201 40 VDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 40 in~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+|+.|..|+|||..||..|..+.+.++
T Consensus 5 in~rD~fgWTalmcaa~eg~~eavsyl 31 (223)
T KOG2384|consen 5 INARDAFGWTALMCAAMEGSNEAVSYL 31 (223)
T ss_pred ccchhhhcchHHHHHhhhcchhHHHHH
Confidence 699999999999999999998777655
No 119
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=72.51 E-value=1.9 Score=45.31 Aligned_cols=58 Identities=22% Similarity=0.184 Sum_probs=47.3
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
.++--+..|+++|+.-.|+-.++ ......+.+|.+|.-|.++||+|..+.+.+..+++
T Consensus 24 ~~e~~fL~a~E~gd~~~V~k~l~--~~~~~~lninc~d~lGr~al~iai~nenle~~eLL 81 (822)
T KOG3609|consen 24 EGEKGFLLAHENGDVPLVAKALE--YKAVSKLNINCRDPLGRLALHIAIDNENLELQELL 81 (822)
T ss_pred hhhHHHHHHHHcCChHHHHHHHH--hccccccchhccChHhhhceecccccccHHHHHHH
Confidence 35556788999999999998887 43334456799999999999999999998877665
No 120
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=54.40 E-value=1e+02 Score=27.00 Aligned_cols=11 Identities=64% Similarity=0.896 Sum_probs=7.1
Q ss_pred cCCCCcccccc
Q 021201 97 KKGLTPRALFS 107 (316)
Q Consensus 97 ~~G~Tp~~l~~ 107 (316)
++|+|+.+++-
T Consensus 43 k~G~tA~~lfG 53 (206)
T PF06570_consen 43 KKGKTARQLFG 53 (206)
T ss_pred hCCCcHHHHcC
Confidence 34677777665
No 121
>PF12304 BCLP: Beta-casein like protein; InterPro: IPR020977 This entry represents eukaryotic proteins that are typically between 216 to 240 amino acids in length which have two conserved sequence motifs: VLR and TRIY. Beta-casein-like protein is associated with cell morphology and a regulation of growth pattern of tumours. It is found in adenocarcinomas of uterine cervical tissues[].
Probab=46.01 E-value=47 Score=28.81 Aligned_cols=31 Identities=35% Similarity=0.521 Sum_probs=24.0
Q ss_pred hhhHhHHHHHHHHHHHHHHH-HhhhcCccccc
Q 021201 166 KIFAVSNVISLVASTLSIVV-FLSLVTPRYAE 196 (316)
Q Consensus 166 ~~F~~~n~~a~~~S~~~i~~-~~~~~~s~~~~ 196 (316)
.-|.++|.+|..+-+.+|.. ...|+.||+-.
T Consensus 38 ~eY~vsNiisv~Sgll~I~~GI~AIvlSrnl~ 69 (188)
T PF12304_consen 38 LEYAVSNIISVTSGLLSIICGIVAIVLSRNLR 69 (188)
T ss_pred ehhhHHHHHHHHHHHHHHHHhHHHHhhhccCC
Confidence 45789999999999988866 44577887643
No 122
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=36.15 E-value=12 Score=34.79 Aligned_cols=16 Identities=19% Similarity=0.407 Sum_probs=0.0
Q ss_pred CCceeeehhhHHhHHH
Q 021201 236 GSTWIAILVIVVPSVP 251 (316)
Q Consensus 236 ~~~~~~~~i~~~~~~~ 251 (316)
+..|+.+..+++|++.
T Consensus 133 GAs~WtiLaFcLAF~L 148 (381)
T PF05297_consen 133 GASFWTILAFCLAFLL 148 (381)
T ss_dssp ----------------
T ss_pred hhHHHHHHHHHHHHHH
Confidence 4455555555555443
No 123
>COG4298 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.58 E-value=73 Score=24.09 Aligned_cols=19 Identities=16% Similarity=0.100 Sum_probs=14.6
Q ss_pred hhHhHHHHHHHHHHHHHHH
Q 021201 167 IFAVSNVISLVASTLSIVV 185 (316)
Q Consensus 167 ~F~~~n~~a~~~S~~~i~~ 185 (316)
+++++|..||..|...+.+
T Consensus 15 awi~f~waafg~s~~m~~~ 33 (95)
T COG4298 15 AWIMFNWAAFGASYFMLGL 33 (95)
T ss_pred hhHhHHHHHHHHHHHHHHH
Confidence 4677788999999876654
No 124
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=30.57 E-value=2.2e+02 Score=24.68 Aligned_cols=29 Identities=7% Similarity=0.307 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhheecC
Q 021201 207 LYVGLGTLFIAIAAMMVVFSATSFIVFTD 235 (316)
Q Consensus 207 l~~~~~~l~~si~~m~~af~~~~~~v~~~ 235 (316)
++++...+++.+-++++|||.++.+.-+.
T Consensus 84 imi~iAs~llP~PsLVIaYCl~mqi~~~~ 112 (189)
T PF05313_consen 84 IMIIIASLLLPFPSLVIAYCLSMQIYNPG 112 (189)
T ss_pred HHHHHHHHHcCccHHHHHHHHHheeecCC
Confidence 34555566667778889999988776444
No 125
>PRK07668 hypothetical protein; Validated
Probab=27.98 E-value=4.8e+02 Score=23.94 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=26.9
Q ss_pred cCCCCccccccchhhhhhhhhcccc--cccchhHHHHHHHHHHHHHHhh
Q 021201 97 KKGLTPRALFSEQHRDLKEKGEKWM--KDTASSCMIVATLIATVVFAAA 143 (316)
Q Consensus 97 ~~G~Tp~~l~~~~~~~l~~~~~k~l--k~t~~s~lvvA~Liatvtf~a~ 143 (316)
++|+|+.|++.+..++..+|..+.+ ++..+-..+..+.++.++|-+-
T Consensus 43 k~GkTA~~IfG~sPk~yA~EL~~~~~~~~~~~~~~l~~~ii~~l~~~~i 91 (254)
T PRK07668 43 KDGKTVEDIFGDSPKEYANELVKEMEVDRKENIKLILFIIIGILSFWII 91 (254)
T ss_pred HcCCcHHHHhCCCHHHHHHHHhcccCCCcchHHHHHHHHHHHHHHHHHH
Confidence 5688888888865555444433222 2223444555666677766653
No 126
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.86 E-value=1.5e+02 Score=28.44 Aligned_cols=52 Identities=12% Similarity=0.091 Sum_probs=22.2
Q ss_pred HHHHHHHhhhheecCCCceeeehhhH-HhHHHHHHHHHHHHHH-HHHHHHhhhc
Q 021201 221 MMVVFSATSFIVFTDGSTWIAILVIV-VPSVPAILFFYLHFRL-FDDILRSVFV 272 (316)
Q Consensus 221 m~~af~~~~~~v~~~~~~~~~~~i~~-~~~~~~~~f~~~~~~l-~~~~~~~~~~ 272 (316)
.+++++..+|=+.|...+-.++.+++ .+|+...+|++...++ ++-+++-.|+
T Consensus 198 vl~tlaivLFPLWP~~mR~gvyY~sig~~gfl~~IlvLaIvRlILF~I~~il~~ 251 (372)
T KOG2927|consen 198 VLVTLAIVLFPLWPRRMRQGVYYLSIGAGGFLAFILVLAIVRLILFGITWILTG 251 (372)
T ss_pred HHHHHHHHhcccCcHHHhcceeeeecchhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44555555555555533322222222 3333333333333333 4445555555
No 127
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=27.84 E-value=6.1e+02 Score=25.61 Aligned_cols=47 Identities=15% Similarity=0.318 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhheecCCCceeeehhhHHhHHHHHHHHH
Q 021201 211 LGTLFIAIAAMMVVFSATSFIVFTDGSTWIAILVIVVPSVPAILFFY 257 (316)
Q Consensus 211 ~~~l~~si~~m~~af~~~~~~v~~~~~~~~~~~i~~~~~~~~~~f~~ 257 (316)
...++..+.+.+..|.+|-....-.+.+|....+.....+|.++|+.
T Consensus 301 ~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~~lt~~~~P~~~~~~ 347 (521)
T PF02990_consen 301 AAIILYALTSFIAGYVSARLYKSFGGKKWKKNSILTSLLFPGILFSI 347 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCCCceeehhhHHHHHHHHHHHHH
Confidence 34456667778888888776666566688765444444456555443
No 128
>KOG3788 consensus Predicted divalent cation transporter [Inorganic ion transport and metabolism]
Probab=26.90 E-value=6.3e+02 Score=24.97 Aligned_cols=136 Identities=15% Similarity=0.171 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCcCCCCcccccCCcchhhhHhHHHH--HHHHHHHHH-HHHhhhcCccccchh-hhhhh
Q 021201 128 CMIVATLIATVVFAAALTVPGGNKEDTGLPFFLHNVSFKIFAVSNVI--SLVASTLSI-VVFLSLVTPRYAEKD-FLSLL 203 (316)
Q Consensus 128 ~lvvA~Liatvtf~a~~t~Pgg~~~~~G~~~~~~~~~f~~F~~~n~~--a~~~S~~~i-~~~~~~~~s~~~~~~-f~~~l 203 (316)
..+++-+.+-.+...++.|-|+++-+ -..++.+.++ |+.+|++-. +++..+..+|.-..+ .-...
T Consensus 118 atvvgfla~i~a~~lg~~p~~~~~~~-----------~~llL~~SSv~ta~las~vl~~lmv~vIi~srk~~iNPDNIat 186 (441)
T KOG3788|consen 118 ATVVGFLAAIAAIALGIIPEGDFDIE-----------HSLLLCASSVATATLASLVLGILMVVVIIGSRKYDINPDNIAT 186 (441)
T ss_pred HHHHHHHHHHHHHHhccCccCCCcHH-----------HHHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccCCCchhhcc
Confidence 35566666666667777776766432 1223333332 444444333 333444455432211 11223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhheecCCCceeeehhhH--HhHHHHHHHHH------------HHHHHHHHHHHh
Q 021201 204 PRKLYVGLGTLFIAIAAMMVVFSATSFIVFTDGSTWIAILVIV--VPSVPAILFFY------------LHFRLFDDILRS 269 (316)
Q Consensus 204 ~~~l~~~~~~l~~si~~m~~af~~~~~~v~~~~~~~~~~~i~~--~~~~~~~~f~~------------~~~~l~~~~~~~ 269 (316)
|..-.+|=... .+.+ +|.+..+.-..+...|+...+++ ++.+|+-+.+. ..+|+...+..|
T Consensus 187 PiaASlGDl~T----l~~L-~~~~~~~~~~~~~~~~l~~~v~~~flal~pvwi~ia~~~~~t~~Vlk~gw~pvi~Am~IS 261 (441)
T KOG3788|consen 187 PIAASLGDLLT----LSSL-AFFGSLFYNASDTSSYLTVLVVVFFLALLPVWIMIAAEDEGTRRVLKQGWEPVIIAMMIS 261 (441)
T ss_pred hhhhhhhhHHH----HHHH-HHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHhhhccCchhhhhHhcccHHHHHHHHHH
Confidence 43222222111 1122 44444444444434455433332 23345443333 357777777777
Q ss_pred hhcccccccC
Q 021201 270 VFVSDYLIPK 279 (316)
Q Consensus 270 ~~~~~~~~~~ 279 (316)
+++--|+.|-
T Consensus 262 s~gGlIL~k~ 271 (441)
T KOG3788|consen 262 SFGGLILEKT 271 (441)
T ss_pred cccchhhHhh
Confidence 7776555443
No 129
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=25.75 E-value=3.9e+02 Score=24.02 Aligned_cols=29 Identities=17% Similarity=0.096 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 021201 203 LPRKLYVGLGTLFIAIAAMMVVFSATSFI 231 (316)
Q Consensus 203 l~~~l~~~~~~l~~si~~m~~af~~~~~~ 231 (316)
.-+++..+..+..+++....+++..|...
T Consensus 95 ~~r~~~~~~i~~~i~~i~~~~~l~~~~~~ 123 (248)
T PF11368_consen 95 MNRKLEYATIFFNISIIISFLSLFIGYVL 123 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666666666666666666665333
No 130
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=21.17 E-value=6.4e+02 Score=23.01 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=13.8
Q ss_pred eehhhHHhHHHHHHHHHHHHHH
Q 021201 241 AILVIVVPSVPAILFFYLHFRL 262 (316)
Q Consensus 241 ~~~i~~~~~~~~~~f~~~~~~l 262 (316)
-....+++++.-.++.++.+|+
T Consensus 74 ~~~l~~~Gglwy~~lsl~~~~l 95 (284)
T PF12805_consen 74 HALLFLAGGLWYLLLSLLWWPL 95 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666767777777766
No 131
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.97 E-value=95 Score=25.05 Aligned_cols=11 Identities=27% Similarity=0.896 Sum_probs=5.8
Q ss_pred ceeeehhhHHh
Q 021201 238 TWIAILVIVVP 248 (316)
Q Consensus 238 ~~~~~~i~~~~ 248 (316)
+|+++.|.+++
T Consensus 1 RW~l~~iii~~ 11 (130)
T PF12273_consen 1 RWVLFAIIIVA 11 (130)
T ss_pred CeeeHHHHHHH
Confidence 47665554443
Done!