Query 021201
Match_columns 316
No_of_seqs 330 out of 1867
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 14:13:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/021201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/021201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.5 6.7E-15 2.3E-19 124.8 3.3 103 1-109 30-146 (169)
2 3aaa_C Myotrophin, protein V-1 99.5 1.7E-14 5.9E-19 114.4 3.7 80 3-108 35-115 (123)
3 3c5r_A BARD-1, BRCA1-associate 99.4 1.1E-13 3.6E-18 111.7 6.0 101 3-109 5-119 (137)
4 1n0q_A 3ANK, 3 ankyrin repeats 99.4 2.4E-14 8.2E-19 108.2 1.9 78 7-109 1-78 (93)
5 3twr_A Tankyrase-2; ankyrin re 99.4 1.4E-13 4.8E-18 114.2 6.6 106 2-113 36-155 (165)
6 4b93_B Ankyrin repeat domain-c 99.4 7.4E-14 2.5E-18 126.7 4.1 101 3-109 114-228 (269)
7 3f6q_A Integrin-linked protein 99.4 3.8E-13 1.3E-17 113.4 6.7 103 1-109 32-148 (179)
8 2jab_A H10-2-G3; HER2, darpin, 99.4 1.5E-13 5.1E-18 111.0 2.7 81 3-109 42-123 (136)
9 1bd8_A P19INK4D CDK4/6 inhibit 99.3 3E-13 1E-17 111.1 3.1 101 2-109 30-143 (156)
10 3v30_A DNA-binding protein rfx 99.3 7.7E-13 2.6E-17 110.5 5.2 102 2-109 30-145 (172)
11 3v31_A Ankyrin repeat family A 99.3 9.2E-13 3.2E-17 109.5 5.5 103 1-109 29-145 (167)
12 3deo_A Signal recognition part 99.3 2.8E-13 9.6E-18 115.0 2.3 82 2-109 70-153 (183)
13 1d9s_A Cyclin-dependent kinase 99.3 3E-13 1E-17 109.2 2.4 102 1-109 5-121 (136)
14 1oy3_D Transcription factor in 99.3 7.6E-13 2.6E-17 118.3 4.8 104 2-111 152-270 (282)
15 4gpm_A Engineered protein OR26 99.3 5E-13 1.7E-17 113.2 3.2 94 10-109 6-113 (169)
16 1awc_B Protein (GA binding pro 99.3 5E-13 1.7E-17 109.8 2.7 100 4-109 30-143 (153)
17 2y1l_E Darpin-8.4; hydrolase-i 99.3 1.4E-12 4.8E-17 109.0 5.5 102 1-108 40-155 (169)
18 2rfm_A Putative ankyrin repeat 99.3 1.2E-12 4.1E-17 111.4 5.1 102 2-109 29-144 (192)
19 1dcq_A PYK2-associated protein 99.3 5.4E-13 1.9E-17 121.7 2.9 83 2-109 163-248 (278)
20 2zgd_A 3 repeat synthetic anky 99.3 2.7E-13 9.1E-18 106.0 0.6 83 2-109 18-100 (110)
21 3t8k_A Uncharacterized protein 99.3 2.4E-13 8.3E-18 116.8 0.3 101 3-109 32-164 (186)
22 3utm_A Tankyrase-1; tankyrase, 99.3 9.9E-13 3.4E-17 120.9 3.8 88 3-116 242-330 (351)
23 2l6b_A NR1C; ankyrin, consensu 99.3 6.9E-13 2.4E-17 103.7 2.2 81 3-109 4-85 (115)
24 3ehr_A Osteoclast-stimulating 99.3 9.5E-13 3.2E-17 114.8 2.7 101 3-109 68-183 (222)
25 2dzn_A Probable 26S proteasome 99.3 3.1E-12 1.1E-16 111.1 5.8 55 4-64 103-157 (228)
26 1s70_B 130 kDa myosin-binding 99.3 2.2E-12 7.5E-17 116.8 4.6 87 4-115 195-281 (299)
27 3ui2_A Signal recognition part 99.3 1.2E-12 4.2E-17 116.5 2.8 81 2-108 71-153 (244)
28 4hbd_A KN motif and ankyrin re 99.3 1.8E-12 6E-17 117.6 3.6 81 3-109 178-260 (276)
29 2rfm_A Putative ankyrin repeat 99.3 1.8E-12 6.2E-17 110.3 3.2 103 1-109 61-177 (192)
30 2rfa_A Transient receptor pote 99.2 4.8E-12 1.6E-16 110.4 5.8 105 2-108 31-163 (232)
31 1yyh_A HN1;, notch 1, ankyrin 99.2 3.1E-12 1E-16 113.9 4.1 103 2-109 84-200 (253)
32 1ihb_A P18-INK4C(INK6), cyclin 99.2 1.7E-12 6E-17 106.9 2.3 101 2-109 32-147 (162)
33 1n0r_A 4ANK, 4 ankyrin repeats 99.2 2.2E-12 7.4E-17 101.2 2.7 97 7-109 1-111 (126)
34 1ycs_B 53BP2, P53BP2; ankyrin 99.2 2.5E-12 8.5E-17 113.9 3.3 79 2-106 64-144 (239)
35 3aji_A 26S proteasome non-ATPa 99.2 5.8E-12 2E-16 109.7 5.5 102 2-109 67-182 (231)
36 2vge_A RELA-associated inhibit 99.2 5.5E-12 1.9E-16 111.5 5.4 94 7-106 20-128 (229)
37 3b7b_A Euchromatic histone-lys 99.2 6.2E-12 2.1E-16 109.9 5.5 57 3-64 72-128 (237)
38 1n0q_A 3ANK, 3 ankyrin repeats 99.2 4.7E-12 1.6E-16 95.4 3.8 60 1-66 28-87 (93)
39 3jxi_A Vanilloid receptor-rela 99.2 2.9E-12 9.8E-17 114.0 3.1 84 3-108 88-185 (260)
40 1oy3_D Transcription factor in 99.2 4.9E-12 1.7E-16 113.0 3.9 87 1-109 2-88 (282)
41 1k1a_A B-cell lymphoma 3-encod 99.2 6.5E-12 2.2E-16 109.8 4.6 102 2-109 110-226 (241)
42 2etb_A Transient receptor pote 99.2 7E-12 2.4E-16 111.3 4.4 84 3-108 85-181 (256)
43 2xai_A ASB-9, ankyrin repeat a 99.2 7.3E-12 2.5E-16 112.0 4.5 102 2-109 30-144 (261)
44 3hra_A Ankyrin repeat family p 99.2 9E-12 3.1E-16 106.1 4.5 59 2-66 33-91 (201)
45 1ikn_D Protein (I-kappa-B-alph 99.2 9.2E-12 3.1E-16 109.2 4.6 107 1-109 71-194 (236)
46 3aaa_C Myotrophin, protein V-1 99.2 4.2E-12 1.4E-16 100.5 1.9 81 4-109 3-83 (123)
47 2pnn_A Transient receptor pote 99.2 8.4E-12 2.9E-16 112.0 4.1 84 4-109 97-194 (273)
48 1sw6_A Regulatory protein SWI6 99.2 1.2E-11 4.2E-16 114.8 5.2 83 2-108 124-210 (327)
49 1awc_B Protein (GA binding pro 99.2 6.3E-12 2.1E-16 103.1 2.8 95 8-109 2-110 (153)
50 2b0o_E UPLC1; arfgap, structur 99.2 2.8E-12 9.6E-17 118.3 0.6 81 4-109 186-269 (301)
51 1sw6_A Regulatory protein SWI6 99.2 1.1E-11 3.7E-16 115.2 4.5 87 1-108 194-325 (327)
52 2l6b_A NR1C; ankyrin, consensu 99.2 6.5E-12 2.2E-16 98.0 2.6 77 1-103 35-112 (115)
53 1bi7_B P16INK4A, MTS1, multipl 99.2 9.4E-12 3.2E-16 102.7 3.6 96 2-104 39-149 (156)
54 2xai_A ASB-9, ankyrin repeat a 99.2 1E-11 3.5E-16 111.1 4.0 100 4-109 97-209 (261)
55 3kea_A K1L; tropism, ANK repea 99.2 2.7E-11 9.1E-16 110.2 6.7 101 1-109 24-139 (285)
56 1k1a_A B-cell lymphoma 3-encod 99.2 1.4E-11 4.9E-16 107.6 4.6 64 1-66 2-65 (241)
57 1ikn_D Protein (I-kappa-B-alph 99.2 7.5E-12 2.6E-16 109.8 2.8 105 3-109 3-127 (236)
58 2f8y_A Notch homolog 1, transl 99.2 1.6E-11 5.6E-16 106.2 4.7 103 2-109 52-168 (223)
59 3aji_A 26S proteasome non-ATPa 99.2 1.6E-11 5.3E-16 106.9 4.5 102 2-109 34-149 (231)
60 1bi7_B P16INK4A, MTS1, multipl 99.1 3.1E-12 1E-16 105.6 -0.6 100 3-109 7-121 (156)
61 1yyh_A HN1;, notch 1, ankyrin 99.1 3.4E-11 1.2E-15 107.1 6.0 126 3-134 52-199 (253)
62 3d9h_A CDNA FLJ77766, highly s 99.1 2.3E-11 7.9E-16 110.5 5.0 100 2-108 53-166 (285)
63 4b93_B Ankyrin repeat domain-c 99.1 1.8E-11 6.2E-16 110.8 4.3 81 2-108 80-161 (269)
64 2rfa_A Transient receptor pote 99.1 1E-11 3.6E-16 108.3 2.5 85 3-109 116-207 (232)
65 1bd8_A P19INK4D CDK4/6 inhibit 99.1 8E-12 2.7E-16 102.4 1.6 97 7-109 1-111 (156)
66 1ihb_A P18-INK4C(INK6), cyclin 99.1 6.6E-12 2.3E-16 103.4 1.1 97 6-109 3-113 (162)
67 3lvq_E ARF-GAP with SH3 domain 99.1 1E-11 3.5E-16 122.1 2.5 81 4-109 167-250 (497)
68 1n11_A Ankyrin; clathrin, BAND 99.1 1.2E-11 4.2E-16 118.2 2.8 102 2-109 272-387 (437)
69 1s70_B 130 kDa myosin-binding 99.1 1.7E-11 6E-16 110.8 3.6 82 2-109 67-149 (299)
70 3v30_A DNA-binding protein rfx 99.1 3.6E-11 1.2E-15 100.2 5.2 96 1-102 62-171 (172)
71 3d9h_A CDNA FLJ77766, highly s 99.1 2.6E-11 8.8E-16 110.2 4.3 98 5-108 154-264 (285)
72 2f8y_A Notch homolog 1, transl 99.1 3.5E-11 1.2E-15 104.1 4.6 99 4-108 21-134 (223)
73 3kea_A K1L; tropism, ANK repea 99.1 3.2E-11 1.1E-15 109.7 4.5 101 2-108 89-204 (285)
74 3hra_A Ankyrin repeat family p 99.1 1.7E-11 5.8E-16 104.4 2.3 104 1-109 65-188 (201)
75 3utm_A Tankyrase-1; tankyrase, 99.1 2.4E-11 8.4E-16 111.5 3.5 102 1-108 51-166 (351)
76 3jue_A Arfgap with coiled-coil 99.1 2.6E-11 8.9E-16 115.2 3.3 83 2-109 227-311 (368)
77 3ehr_A Osteoclast-stimulating 99.1 8.3E-12 2.9E-16 108.7 -0.2 60 1-66 99-159 (222)
78 3ljn_A Hypothetical protein; a 99.1 1.9E-11 6.5E-16 114.2 2.0 102 2-109 132-254 (364)
79 2dzn_A Probable 26S proteasome 99.1 5.9E-11 2E-15 102.8 4.9 59 4-66 32-91 (228)
80 2etb_A Transient receptor pote 99.1 3.2E-11 1.1E-15 107.0 3.2 86 7-109 135-231 (256)
81 3jxi_A Vanilloid receptor-rela 99.1 3E-11 1E-15 107.3 3.0 89 6-109 138-235 (260)
82 3b7b_A Euchromatic histone-lys 99.1 6E-11 2.1E-15 103.6 4.9 102 1-108 4-120 (237)
83 3v31_A Ankyrin repeat family A 99.1 3.9E-11 1.3E-15 99.5 3.5 96 7-108 2-111 (167)
84 4hbd_A KN motif and ankyrin re 99.1 2.8E-11 9.6E-16 109.6 2.4 103 2-109 105-226 (276)
85 2b0o_E UPLC1; arfgap, structur 99.1 5.7E-11 2E-15 109.5 4.5 78 1-109 219-296 (301)
86 2zgd_A 3 repeat synthetic anky 99.1 5.9E-11 2E-15 92.4 3.8 59 1-65 50-108 (110)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.1 3.4E-11 1.2E-15 94.3 2.1 60 1-66 28-87 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.1 1.4E-11 4.7E-16 99.3 -0.1 81 4-109 10-90 (136)
89 2fo1_E LIN-12 protein; beta-ba 99.1 3.7E-11 1.3E-15 113.4 2.4 82 3-109 274-356 (373)
90 1n11_A Ankyrin; clathrin, BAND 99.0 7.6E-11 2.6E-15 112.7 3.0 101 2-108 8-122 (437)
91 2pnn_A Transient receptor pote 99.0 1.2E-10 3.9E-15 104.5 3.1 89 6-109 146-243 (273)
92 1wdy_A 2-5A-dependent ribonucl 99.0 2.1E-10 7.1E-15 102.0 4.6 99 5-109 36-158 (285)
93 1wdy_A 2-5A-dependent ribonucl 99.0 1.3E-10 4.6E-15 103.2 3.3 101 3-109 143-263 (285)
94 1ycs_B 53BP2, P53BP2; ankyrin 99.0 6.7E-11 2.3E-15 104.6 0.6 80 5-109 34-113 (239)
95 3c5r_A BARD-1, BRCA1-associate 99.0 1.7E-10 6E-15 92.6 2.9 60 1-66 36-95 (137)
96 2vge_A RELA-associated inhibit 99.0 8.8E-11 3E-15 103.7 1.1 60 1-66 47-106 (229)
97 3eu9_A Huntingtin-interacting 99.0 5.3E-10 1.8E-14 96.9 6.0 101 3-109 104-220 (240)
98 1dcq_A PYK2-associated protein 99.0 2.8E-10 9.6E-15 103.6 3.9 60 1-66 198-257 (278)
99 2fo1_E LIN-12 protein; beta-ba 99.0 1.3E-10 4.6E-15 109.5 1.8 83 1-109 159-245 (373)
100 1d9s_A Cyclin-dependent kinase 98.9 2.6E-10 8.9E-15 91.7 2.9 59 1-66 38-97 (136)
101 4g8k_A 2-5A-dependent ribonucl 98.9 5.2E-10 1.8E-14 103.3 5.3 61 2-64 52-142 (337)
102 2y1l_E Darpin-8.4; hydrolase-i 98.9 2.5E-10 8.6E-15 95.1 2.4 98 5-108 11-122 (169)
103 3ljn_A Hypothetical protein; a 98.9 2.4E-10 8.3E-15 106.7 2.2 70 40-109 131-221 (364)
104 3twr_A Tankyrase-2; ankyrin re 98.9 5.5E-10 1.9E-14 92.3 3.9 60 1-66 68-127 (165)
105 3jue_A Arfgap with coiled-coil 98.9 4.7E-10 1.6E-14 106.6 3.8 87 1-109 261-347 (368)
106 4g8k_A 2-5A-dependent ribonucl 98.9 2.3E-10 7.9E-15 105.7 1.6 97 7-109 24-135 (337)
107 3ui2_A Signal recognition part 98.9 1.1E-10 3.7E-15 103.8 -1.6 80 4-109 41-121 (244)
108 3eu9_A Huntingtin-interacting 98.9 7.4E-10 2.5E-14 96.0 3.6 103 1-109 2-119 (240)
109 3f6q_A Integrin-linked protein 98.9 9.9E-10 3.4E-14 92.2 3.9 60 1-66 65-124 (179)
110 3deo_A Signal recognition part 98.8 4.4E-09 1.5E-13 88.8 6.5 56 2-63 103-159 (183)
111 3lvq_E ARF-GAP with SH3 domain 98.8 1.1E-09 3.8E-14 107.5 2.7 60 1-66 200-259 (497)
112 2aja_A Ankyrin repeat family p 98.7 9.3E-10 3.2E-14 104.8 -3.3 103 4-109 88-209 (376)
113 3t8k_A Uncharacterized protein 98.6 1.6E-08 5.4E-13 86.5 2.0 53 1-59 68-127 (186)
114 2aja_A Ankyrin repeat family p 98.2 5.6E-08 1.9E-12 92.4 -3.8 59 3-66 123-182 (376)
115 2l8s_A Integrin alpha-1; trans 23.1 41 0.0014 22.2 1.8 13 237-249 7-19 (54)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.49 E-value=6.7e-15 Score=124.79 Aligned_cols=103 Identities=23% Similarity=0.282 Sum_probs=70.8
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+..++.+++++|++ .+.+ ++.+|.+|+||||+|+..|+.+++++| .|
T Consensus 30 vn~~d~~g~t~l~~a~~~~~~~~~~~ll~--~gad----~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G 103 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAENGHKEVVKLLIS--KGAD----VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDG 103 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHh--cccc----hhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCC
Confidence 45667777777777777777777777777 5543 577777777777777777777766554 22
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++...+.+..+.++.++. +.+++.+|++|+||++++.+.
T Consensus 104 ~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~ 146 (169)
T 4gpm_A 104 RTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREH 146 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 23444444444555555553 467888999999999988654
No 2
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.47 E-value=1.7e-14 Score=114.43 Aligned_cols=80 Identities=20% Similarity=0.118 Sum_probs=46.2
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
.+|..|+||||+|+++++.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++
T Consensus 35 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~d~~g~tpL~~A~~~~~~~~-------------------- 88 (123)
T 3aaa_C 35 RTLEGGRKPLHYAADCGQLEILEFLLL--KGAD----INAPDKHHITPLLSAVYEGHVSC-------------------- 88 (123)
T ss_dssp SCCTTSSCHHHHHHHTTCHHHHHHHHT--TTCC----TTCCCTTSCCHHHHHHHHTCHHH--------------------
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHH--cCCC----CCcCCCCCCCHHHHHHHcCCHHH--------------------
Confidence 445555555555555555555555555 4332 45555555555555555555433
Q ss_pred HHHhcc-chhhhhhccCCCCccccccc
Q 021201 83 VKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 83 v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
++.++. +.+++.+|.+|+||++++..
T Consensus 89 v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 89 VKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 333332 35678889999999998754
No 3
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.43 E-value=1.1e-13 Score=111.73 Aligned_cols=101 Identities=18% Similarity=0.145 Sum_probs=80.9
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------c
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------S 69 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------a 69 (316)
.+|.+|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .| .
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQ--NGSD----PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH--TTCC----SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence 368899999999999999999999999 6653 689999999999999999998877655 22 3
Q ss_pred hHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 119 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhc
Confidence 4555555555666666664 467889999999999998765
No 4
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.43 E-value=2.4e-14 Score=108.22 Aligned_cols=78 Identities=28% Similarity=0.381 Sum_probs=64.2
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKV 86 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~l 86 (316)
+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| ++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~n~~d~~g~t~L~~A~~~~~~~~v~~L----------------l~-- 56 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLE--AGAD----VNAKDKNGRTPLHLAARNGHLEVVKLL----------------LE-- 56 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH----------------HH--
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH--cCCC----CcccCCCCCCHHHHHHHcCCHHHHHHH----------------HH--
Confidence 58999999999999999999999 7654 799999999999999999987665444 11
Q ss_pred ccchhhhhhccCCCCccccccch
Q 021201 87 VPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 87 v~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+.+++.+|.+|+||++++...
T Consensus 57 -~ga~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 57 -AGADVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp -TTCCTTCCCTTSCCHHHHHHHT
T ss_pred -cCCCCCccCCCCCCHHHHHHHc
Confidence 2456788999999999988654
No 5
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.43 E-value=1.4e-13 Score=114.24 Aligned_cols=106 Identities=20% Similarity=0.232 Sum_probs=83.2
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+..|..|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .|
T Consensus 36 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 109 (165)
T 3twr_A 36 RDIEGRQSTPLHFAAGYNRVSVVEYLLQ--HGAD----VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKF 109 (165)
T ss_dssp CCTTTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred cccccCCCCHHHHHHHcChHHHHHHHHh--cCCC----CCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCC
Confidence 4567889999999999999999999999 6653 689999999999999999998877665 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccchhhhh
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQHRDL 113 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~~~~l 113 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++.+.+.+.
T Consensus 110 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~i 155 (165)
T 3twr_A 110 TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDI 155 (165)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhcCChHH
Confidence 34555555555666666664 4678899999999999987755443
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.41 E-value=7.4e-14 Score=126.68 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=57.5
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------c
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------S 69 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------a 69 (316)
.+|.+|+||+|+|+..++.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.+++++| .| .
T Consensus 114 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~--~g~~----~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t 187 (269)
T 4b93_B 114 ARNADQAVPLHLACQQGHFQVVKCLLD--SNAK----PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNT 187 (269)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH--TTCC----SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCB
T ss_pred ccCCCCCCccccccccChHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCc
Confidence 345555555555555555555555555 4432 455555555555555555555554443 12 2
Q ss_pred hHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+..+.|+.++. +++++.+|++|+||++++.+.
T Consensus 188 ~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 188 ALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 2333333333444555543 467899999999999998653
No 7
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.39 E-value=3.8e-13 Score=113.43 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=82.4
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|..|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .|
T Consensus 32 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g 105 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACREGRSAVVEMLIM--RGAR----INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHG 105 (179)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred ccccCCCCCCHHHHHHHcCcHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCC
Confidence 35678899999999999999999999999 6654 689999999999999999998887665 22
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 106 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 106 NVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHH
Confidence 34555555555666666664 467888999999999998765
No 8
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.36 E-value=1.5e-13 Score=110.98 Aligned_cols=81 Identities=21% Similarity=0.189 Sum_probs=44.9
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
.+|..|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.+ .
T Consensus 42 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~d~~g~t~L~~A~~~~~~~--------------------~ 95 (136)
T 2jab_A 42 AKDEYGLTPLYLATAHGHLEIVEVLLK--NGAD----VNAVDAIGFTPLHLAAFIGHLE--------------------I 95 (136)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHHTCHH--------------------H
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCcCCCCCCCHHHHHHHcCCHH--------------------H
Confidence 344445555555555555555555554 3322 3444555555555555544433 3
Q ss_pred HHHhcc-chhhhhhccCCCCccccccch
Q 021201 83 VKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 83 v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.++. +.+++.+|.+|+||++++...
T Consensus 96 v~~Ll~~g~~~~~~~~~g~tpl~~A~~~ 123 (136)
T 2jab_A 96 AEVLLKHGADVNAQDKFGKTAFDISIGN 123 (136)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCCCcCcCCCCCCHHHHHHHC
Confidence 443332 456788999999999988754
No 9
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.34 E-value=3e-13 Score=111.08 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=65.5
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+ +.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.++++.| .|
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 102 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLK--QGAS----PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGA 102 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC
Confidence 4456677777777 77777777777777 5543 567777777777777777776665544 11
Q ss_pred chHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++...+.+.+|.+|+||++++...
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~g~t~l~~A~~~ 143 (156)
T 1bd8_A 103 LPIHLAVQEGHTAVVSFLAAESDLHRRDARGLTPLELALQR 143 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTSCTTCCCTTSCCHHHHHHHS
T ss_pred cHHHHHHHhChHHHHHHHHhccCCCCcCCCCCCHHHHHHHc
Confidence 23344433344455555554467788889999999887654
No 10
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.33 E-value=7.7e-13 Score=110.51 Aligned_cols=102 Identities=19% Similarity=0.135 Sum_probs=79.3
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .|
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 103 (172)
T 3v30_A 30 NKPDERGFTPLIWASAFGEIETVRFLLE--WGAD----PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGG 103 (172)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHH--HTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----chhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 5678899999999999999999999999 7654 688999999999999999998877655 12
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 104 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 104 TPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVAL 145 (172)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHh
Confidence 34455544455566666553 466788888889998887654
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.33 E-value=9.2e-13 Score=109.48 Aligned_cols=103 Identities=17% Similarity=0.140 Sum_probs=72.5
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.+ .|
T Consensus 29 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 102 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQ--NGAD----PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG 102 (167)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTS
T ss_pred cCCCCCCCCCHHHHHHHCCCHHHHHHHHH--cCCC----CCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCC
Confidence 35678888888888888888888888888 6543 577888888888888888887776554 11
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 103 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 103 GTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 33444444444555555553 356677778888888877654
No 12
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.33 E-value=2.8e-13 Score=115.02 Aligned_cols=82 Identities=23% Similarity=0.267 Sum_probs=51.2
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+.+ +|.+| .+|+||||+|+..++.++++.
T Consensus 70 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~----~~~~~~~~g~tpL~~A~~~~~~~~v~~--------------- 128 (183)
T 3deo_A 70 DAVDENGRTALLFVAGLGSDKCVRLLAE--AGAD----LDHRDMRGGLTALHMAAGYVRPEVVEA--------------- 128 (183)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCSSSSCCHHHHHHHTTCHHHHHH---------------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCcCCCCCCCCHHHHHHhcCcHHHHHH---------------
Confidence 4455666666666666666666666666 4432 45555 566666666666665444333
Q ss_pred hHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++. +.+++.+|.+|+||++++.+.
T Consensus 129 -----Ll~~ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 129 -----LVELGADIEVEDERGLTALELAREI 153 (183)
T ss_dssp -----HHHHTCCTTCCCTTSCCHHHHHHHH
T ss_pred -----HHHcCCCCcCCCCCCCCHHHHHHHh
Confidence 332 356788999999999988654
No 13
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.33 E-value=3e-13 Score=109.16 Aligned_cols=102 Identities=12% Similarity=0.064 Sum_probs=74.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+. ++.++++.| .|
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~ 77 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLE--AGAD----PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPAT 77 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTT
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHH--cCCC----cCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCC
Confidence 46789999999999999999999999999 6653 68999999999999999 887776654 11
Q ss_pred --chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 --SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 --aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 78 LTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 23444433344444554443 345666777777777766543
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.32 E-value=7.6e-13 Score=118.31 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=67.6
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCC-CCChHHHHHhhhCCCCccccc--cC----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDG-EGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~-~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
+.+|..|+||||+|+.+|+.+++++|++ .+.. +|.+|. .|+||||+|+..++.+++++| .|
T Consensus 152 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g 225 (282)
T 1oy3_D 152 EAENYDGHTPLHVAVIHKDAEMVRLLRD--AGAD----LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGG 225 (282)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH--HTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHH--cCCC----CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCC
Confidence 4678899999999999999999999999 7764 678885 499999999999998887765 22
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccchhh
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQHR 111 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~~~ 111 (316)
.+++.....+..+.++.++. +++++.+|.+|+||++.+.....
T Consensus 226 ~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 226 RTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred CCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 34444444444555555553 46788888999999888776543
No 15
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.32 E-value=5e-13 Score=113.15 Aligned_cols=94 Identities=22% Similarity=0.217 Sum_probs=76.0
Q ss_pred cHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHHhHHH
Q 021201 10 TIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQMQRE 76 (316)
Q Consensus 10 T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~~~~e 76 (316)
+.|+.|+++|+.++|++|++ .+++ +|.+|.+|+||||+|+..++.+.++.+ .| .+++....
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~--~Gad----vn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIE--NGAD----VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHH
Confidence 47999999999999999999 7764 799999999999999999988776554 22 35555555
Q ss_pred hhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 77 LLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 77 l~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 80 ~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~ 113 (169)
T 4gpm_A 80 NGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 113 (169)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred cCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 566677777664 467899999999999988654
No 16
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.31 E-value=5e-13 Score=109.79 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=73.9
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------ch
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SA 70 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aa 70 (316)
.|..|+||||+|+.+|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.+ .| .+
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 103 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLR--AGVS----RDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTA 103 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHT--TTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCH
Confidence 57789999999999999999999999 6653 688999999999999999988777655 12 23
Q ss_pred HHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 71 LQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 71 l~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 104 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 143 (153)
T 1awc_B 104 LHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143 (153)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 444444444455555543 356677778888888776544
No 17
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.31 E-value=1.4e-12 Score=109.02 Aligned_cols=102 Identities=21% Similarity=0.251 Sum_probs=70.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+++|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.| .|
T Consensus 40 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g 113 (169)
T 2y1l_E 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLK--NGAD----VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEG 113 (169)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 35678889999999999999999999998 6653 688899999999999998887776654 12
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++.+
T Consensus 114 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 114 HTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISID 155 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 23333333334444444442 34556666667777766554
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.31 E-value=1.2e-12 Score=111.44 Aligned_cols=102 Identities=16% Similarity=0.030 Sum_probs=75.3
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+.+|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.| .|
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 102 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVE--NFDK----LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGK 102 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHH--HHCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSC
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHH--hccc----cccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 5678889999999999999999999888 6653 678888899999999988887776654 12
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|.||++++...
T Consensus 103 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (192)
T 2rfm_A 103 TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKY 144 (192)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 34455444455555665553 456778888899999887654
No 19
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.30 E-value=5.4e-13 Score=121.68 Aligned_cols=83 Identities=20% Similarity=0.313 Sum_probs=70.2
Q ss_pred ccccCCCCcHHhHHHHC---CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhh
Q 021201 2 WKCDENRYTIFHIAVSN---RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELL 78 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~---~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~ 78 (316)
+..|..|+||||+|+.+ ++.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~--~ga~----in~~d~~g~TpLh~A~~~g~~~~v~~L------------ 224 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQ--NSGN----LDKQTGKGSTALHYCCLTDNAECLKLL------------ 224 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH--HCSC----TTCCCTTCCCHHHHHHHTTCHHHHHHH------------
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHH--CCCC----ccccCCCCCCHHHHHHHcCCHHHHHHH------------
Confidence 34588899999999999 89999999999 7764 799999999999999999997766554
Q ss_pred hHhHHHHhccchhhhhhccCCCCccccccch
Q 021201 79 WFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 79 w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+++++.+|.+|+||++++...
T Consensus 225 ----l~---~gad~~~~d~~g~tpL~~A~~~ 248 (278)
T 1dcq_A 225 ----LR---GKASIEIANESGETPLDIAKRL 248 (278)
T ss_dssp ----HH---TTCCTTCCCTTSCCHHHHHHHT
T ss_pred ----HH---cCCCCCCccCCCCCHHHHHHHc
Confidence 11 3467889999999999998764
No 20
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.30 E-value=2.7e-13 Score=105.95 Aligned_cols=83 Identities=18% Similarity=0.142 Sum_probs=66.7
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
...|.+|+|+||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----i~~~d~~g~tpLh~A~~~~~~~~v~~L--------------- 76 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMA--NGAD----VAAKDKNGSTPLHLAARNGHLEVVKLL--------------- 76 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH---------------
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHH--cCCC----CCccCCCCCCHHHHHHHcCCHHHHHHH---------------
Confidence 4578999999999999999999999999 6653 689999999999999999986665443
Q ss_pred HHHHhccchhhhhhccCCCCccccccch
Q 021201 82 AVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 82 ~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+.+++.+|.+|+||++++...
T Consensus 77 -l~---~ga~~~~~d~~g~tpl~~A~~~ 100 (110)
T 2zgd_A 77 -LE---AGADVXAQDKFGKTAFDISIDN 100 (110)
T ss_dssp -HH---TTCCTTCCCTTSCCHHHHHHHH
T ss_pred -HH---cCCCccccccCCCcHHHHHHHc
Confidence 11 2456788999999999988764
No 21
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.30 E-value=2.4e-13 Score=116.84 Aligned_cols=101 Identities=15% Similarity=0.072 Sum_probs=70.3
Q ss_pred ccc-CCCCcHHhHHHHCCCH----HHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCC------ccccc--cCc
Q 021201 3 KCD-ENRYTIFHIAVSNRQV----ELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPD------RLNVV--SGS 69 (316)
Q Consensus 3 ~~D-~~G~T~LH~Av~~~~~----~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~------~v~~L--~ga 69 (316)
.+| ..|+||||+|+.+++. +++++|++ .+++ +|.+|.+|+||||+|+..++.+ ++++| .|+
T Consensus 32 ~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~--~Gad----vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga 105 (186)
T 3t8k_A 32 DKESVLKSNILYDVLRNNNDEARYKISMFLIN--KGAD----IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA 105 (186)
T ss_dssp CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH--TTCC----SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred cccccCCCCHHHHHHHcCCcchHHHHHHHHHH--CCCC----CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC
Confidence 344 6799999999999975 59999999 7764 7999999999999999998754 24433 333
Q ss_pred hHH------------hHHH-----hhhHhHHHHhcc--chhhhhhccCCCCccccccch
Q 021201 70 ALQ------------MQRE-----LLWFQAVKKVVP--RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~------------~~~e-----l~w~~~v~~lv~--~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.++ .... ....+.++.++. +.+++.+|++|+||++++.+.
T Consensus 106 din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~ 164 (186)
T 3t8k_A 106 DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164 (186)
T ss_dssp CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence 222 2111 111223444443 467888888888888887664
No 22
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.29 E-value=9.9e-13 Score=120.91 Aligned_cols=88 Identities=14% Similarity=0.198 Sum_probs=52.8
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
.+|.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++
T Consensus 242 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~n~~d~~g~t~L~~A~~~~~~~~-------------------- 295 (351)
T 3utm_A 242 EKNKDFMTPLHVAAERAHNDVMEVLHK--HGAK----MNALDSLGQTALHRAALAGHLQT-------------------- 295 (351)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHH--------------------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHcCcHHH--------------------
Confidence 345555555555555555555555555 4432 45555555555555555555443
Q ss_pred HHHhcc-chhhhhhccCCCCccccccchhhhhhhh
Q 021201 83 VKKVVP-RKLAEAKNKKGLTPRALFSEQHRDLKEK 116 (316)
Q Consensus 83 v~~lv~-~~~~~~~N~~G~Tp~~l~~~~~~~l~~~ 116 (316)
++.++. +.+++.+|++|+||++++.+...++..+
T Consensus 296 v~~Ll~~gad~~~~~~~g~tal~~a~~~~~~~l~~ 330 (351)
T 3utm_A 296 CRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSE 330 (351)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHSCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCChhhhhhHHHHHHHHh
Confidence 443332 4678899999999999997766555544
No 23
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.29 E-value=6.9e-13 Score=103.65 Aligned_cols=81 Identities=26% Similarity=0.283 Sum_probs=67.7
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
-+|++|+|+||+|+.+|+.+++++|++ .+.. +|.+|.+|+||||+|+..++.++++.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~d~~g~t~L~~A~~~~~~~~~~~L---------------- 61 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLS--KGAD----VNARSKDGNTPLHLAAKNGHAEIVKLL---------------- 61 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTT--TTCC----SSCCCSSSCCTTHHHHTTTCHHHHHHH----------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHH----------------
Confidence 468999999999999999999999999 6653 689999999999999999986655443
Q ss_pred HHHhc-cchhhhhhccCCCCccccccch
Q 021201 83 VKKVV-PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 83 v~~lv-~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+ .+.+++.+|.+|+||++++...
T Consensus 62 ----l~~g~~~~~~d~~g~tpl~~A~~~ 85 (115)
T 2l6b_A 62 ----LAKGADVNARSKDGNTPEHLAKKN 85 (115)
T ss_dssp ----TTTTCCTTCCCTTCCCTTHHHHTT
T ss_pred ----HHcCCCCcccCCCCCCHHHHHHHC
Confidence 2 2356788899999999987654
No 24
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.27 E-value=9.5e-13 Score=114.77 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=70.7
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--c-C-----------
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--S-G----------- 68 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~-g----------- 68 (316)
..|.+|+|+||+|+.+|+.+++++|++ .+.. +|.+|.+|+||||+|+..|+.++++.| . |
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~ 141 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLD--NRVG----VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGD 141 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSC
T ss_pred ccccccccccccccccCcHHHHHHHHh--CCCC----ccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCC
Confidence 456677788888888888888888877 5543 577777888888888887777766554 1 2
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 142 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 183 (222)
T 3ehr_A 142 TALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNA 183 (222)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcch
Confidence 23444444455555665553 467889999999999998764
No 25
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.27 E-value=3.1e-12 Score=111.06 Aligned_cols=55 Identities=22% Similarity=0.215 Sum_probs=27.8
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccc
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLN 64 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~ 64 (316)
+|.+|+||||+|+.+|+.+++++|++ .+.+ ++.+|.+|+||||+|+..++.++++
T Consensus 103 ~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 103 ITNQGVTCLHLAVGKKWFEVSQFLIE--NGAS----VRIKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----SCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCcCCCCHHHHHHHcCCHhHHHHHHH--cCCC----ccccCCCCCCHHHHHHHcCCHHHHH
Confidence 34445555555555555555555555 3332 3455555555555555555544443
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.26 E-value=2.2e-12 Score=116.78 Aligned_cols=87 Identities=23% Similarity=0.201 Sum_probs=71.9
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.|..|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.++++.| +
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~d----~~~~d~~g~tpL~~A~~~~~~~~v~~L----------------l 252 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQ--ARYD----VNIKDYDGWTPLHAAAHWGKEEACRIL----------------V 252 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHT--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH----------------H
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHH--cCCC----CCCcCCCCCcHHHHHHhcCCHHHHHHH----------------H
Confidence 46789999999999999999999999 7754 799999999999999999997665544 1
Q ss_pred HHhccchhhhhhccCCCCccccccchhhhhhh
Q 021201 84 KKVVPRKLAEAKNKKGLTPRALFSEQHRDLKE 115 (316)
Q Consensus 84 ~~lv~~~~~~~~N~~G~Tp~~l~~~~~~~l~~ 115 (316)
+ .+.+++.+|.+|+||++++.+...+..+
T Consensus 253 ~---~gad~~~~d~~g~t~l~~A~~~~~~~l~ 281 (299)
T 1s70_B 253 E---NLCDMEAVNKVGQTAFDVADEDILGYLE 281 (299)
T ss_dssp H---TTCCTTCCCTTSCCTTTSCCSGGGHHHH
T ss_pred H---cCCCCCCcCCCCCCHHHHHHHHHHHHHH
Confidence 1 2457789999999999999876544433
No 27
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.26 E-value=1.2e-12 Score=116.54 Aligned_cols=81 Identities=23% Similarity=0.271 Sum_probs=54.6
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+| .+|+||||+|+..|+.+++++|
T Consensus 71 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~~~~~~~~g~t~L~~A~~~g~~~~v~~L-------------- 130 (244)
T 3ui2_A 71 DAVDENGRTALLFVAGLGSDKCVRLLAE--AGAD----LDHRDMRGGLTALHMAAGYVRPEVVEAL-------------- 130 (244)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCSSSCCCHHHHHHHTTCHHHHHHH--------------
T ss_pred CCcCCCCCCHHHHHHHCCCHHHHHHHHH--cCCC----CCcCCCCCCCCHHHHHHHcCCHHHHHHH--------------
Confidence 4566667777777777777777777776 5543 45566 5677777777776665544333
Q ss_pred hHHHHhc-cchhhhhhccCCCCccccccc
Q 021201 81 QAVKKVV-PRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 81 ~~v~~lv-~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+ .+.+++.+|.+|+||++++.+
T Consensus 131 ------l~~ga~~~~~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 131 ------VELGADIEVEDERGLTALELARE 153 (244)
T ss_dssp ------HHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ------HHCCCCCCCCCCCCCcHHHHHHH
Confidence 3 246778899999999998864
No 28
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.26 E-value=1.8e-12 Score=117.64 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=66.4
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
..|..|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 178 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~--~gad----~n~~d~~G~TpLh~A~~~g~~~iv~~L---------------- 235 (276)
T 4hbd_A 178 KASQAGQTALMLAVSHGRVDVVKALLA--CEAD----VNVQDDDGSTALMCACEHGHKEIAGLL---------------- 235 (276)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH----------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHh--CCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHH----------------
Confidence 457779999999999999999999999 7654 688999999999999999886655443
Q ss_pred HHHhc--cchhhhhhccCCCCccccccch
Q 021201 83 VKKVV--PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 83 v~~lv--~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+ .+.+++.+|++|+||++++...
T Consensus 236 ----l~~~gad~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 236 ----LAVPSCDISLTDRDGSTALMVALDA 260 (276)
T ss_dssp ----HTSTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ----HhcCCCCCcCcCCCCCCHHHHHHHc
Confidence 3 2467889999999999998765
No 29
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.25 E-value=1.8e-12 Score=110.29 Aligned_cols=103 Identities=18% Similarity=0.111 Sum_probs=84.5
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|..|+||||+|+.+|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.| .|
T Consensus 61 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 134 (192)
T 2rfm_A 61 LEDKDIEGSTALIWAVKNNRLGIAEKLLS--KGSN----VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEG 134 (192)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--HTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTC
T ss_pred cccccccCccHHHHHHHcCCHHHHHHHHH--CCCC----CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC
Confidence 35678899999999999999999999999 7654 689999999999999999998887765 22
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 135 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 135 ETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIF 177 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHT
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence 35566666666677776664 467889999999999998754
No 30
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.25 E-value=4.8e-12 Score=110.44 Aligned_cols=105 Identities=16% Similarity=0.046 Sum_probs=66.9
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhh-hhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIA-DLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~-~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
+.+|.+|+||||+|+++|+.+++++|++ .+... ....+.+|.+|+||||+|+..|+.++++.| .|
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 108 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLME--AAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGS 108 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH--HCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHH--cCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCc
Confidence 5667888888888888888888888888 54431 111256777888888888888877766544 11
Q ss_pred --------------chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 69 --------------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 --------------aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
.+++...+.+..+.++.++. +.+++.+|.+|+||++++..
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 163 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILIL 163 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 23333333344444554443 35566667777777776554
No 31
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.24 E-value=3.1e-12 Score=113.88 Aligned_cols=103 Identities=24% Similarity=0.199 Sum_probs=74.4
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+.+|+.+++++|++ .+.. .++.+|.+|+||||+|+..++.++++.| .|
T Consensus 84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 158 (253)
T 1yyh_A 84 NIQDNMGRTPLHAAVSADAQGVFQILIR--NRAT---DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 158 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHH--STTS---CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC---CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCC
Confidence 5678888999999999999999999988 5431 2578888888888888888888777655 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 200 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 200 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC
Confidence 34555545555555665553 456778888888888877653
No 32
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.24 E-value=1.7e-12 Score=106.95 Aligned_cols=101 Identities=18% Similarity=0.082 Sum_probs=67.1
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+. |+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.+ .|
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 104 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLL--RGAN----PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGN 104 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 4567777888888777 77888888877 5543 577777888888888877776666554 12
Q ss_pred chHHhHHHhhhHhHHHHhccc-h-hhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVPR-K-LAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~~-~-~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++.. . ..+.+|.+|+||++++...
T Consensus 105 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 105 LPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147 (162)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHc
Confidence 233444444444555555532 2 2578889999999987654
No 33
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.24 E-value=2.2e-12 Score=101.25 Aligned_cols=97 Identities=27% Similarity=0.365 Sum_probs=62.1
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQM 73 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~~ 73 (316)
+|+||||+|+++|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.+ .| .+++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~--~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLE--AGAD----VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHH--HTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHH--cCCC----CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHH
Confidence 46777777777777777777777 5442 466777777777777777766655544 11 23333
Q ss_pred HHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 74 QRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 74 ~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 75 A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 111 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARN 111 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 333333444554443 456788899999999987654
No 34
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.24 E-value=2.5e-12 Score=113.86 Aligned_cols=79 Identities=22% Similarity=0.185 Sum_probs=46.1
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+++
T Consensus 64 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~~~~d~~g~tpL~~A~~~~~~~~v------------------ 119 (239)
T 1ycs_B 64 SLPNDEGITALHNAVCAGHTEIVKFLVQ--FGVN----VNAADSDGWTPLHCAASCNNVQVC------------------ 119 (239)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHH--HTCC----TTCCCTTCCCHHHHHHHTTCHHHH------------------
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCccCCCCCCHHHHHHHcCCHHHH------------------
Confidence 3445556666666666666666666665 4432 455566666666666655554433
Q ss_pred HHHHhc-cchhhhhhccCCC-Cccccc
Q 021201 82 AVKKVV-PRKLAEAKNKKGL-TPRALF 106 (316)
Q Consensus 82 ~v~~lv-~~~~~~~~N~~G~-Tp~~l~ 106 (316)
+.++ .+.+++.+|.+|. ||++++
T Consensus 120 --~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 120 --KFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp --HHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred --HHHHHcCCCcceecCCCCcchHHHH
Confidence 3333 2356677777666 998877
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.23 E-value=5.8e-12 Score=109.70 Aligned_cols=102 Identities=20% Similarity=0.230 Sum_probs=69.7
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+++|+.+++++|++ .+.. ++.+|.+|.||||+|+..++.++++.+ .|
T Consensus 67 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 140 (231)
T 3aji_A 67 NDKDDAGWSPLHIAASAGXDEIVKALLV--KGAH----VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA 140 (231)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCcCCCCCCHHHHHHHcCHHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 5567788888888888888888888888 5543 577888888888888888877766544 12
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 141 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 182 (231)
T 3aji_A 141 TAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDE 182 (231)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHC
Confidence 34444444444555555543 355677777788888776543
No 36
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.23 E-value=5.5e-12 Score=111.50 Aligned_cols=94 Identities=16% Similarity=0.025 Sum_probs=46.1
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQM 73 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~~ 73 (316)
+|.|+||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.++++.| .| .+++.
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~ 93 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVK--EMND----PSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHC 93 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH--HSSC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred chhHHHHHHHHcCCHHHHHHHHh--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 34444555555555555555554 3322 344455555555555555444444332 11 12222
Q ss_pred HHHhhhHhHHHHhcc-chhhhhhc-cCCCCccccc
Q 021201 74 QRELLWFQAVKKVVP-RKLAEAKN-KKGLTPRALF 106 (316)
Q Consensus 74 ~~el~w~~~v~~lv~-~~~~~~~N-~~G~Tp~~l~ 106 (316)
....+..+.++.++. +.+++.++ .+|+||++++
T Consensus 94 A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 94 AASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred HHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 222233334444443 35667765 6999999987
No 37
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.23 E-value=6.2e-12 Score=109.91 Aligned_cols=57 Identities=18% Similarity=0.211 Sum_probs=27.5
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccc
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLN 64 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~ 64 (316)
.+|..|+||||+|+.+|+.+++++|++ .+.. .++.+|.+|.||||+|+..++.++++
T Consensus 72 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~--~~~~---~~~~~~~~g~t~L~~A~~~~~~~~~~ 128 (237)
T 3b7b_A 72 PKDAEGSTCLHLAAKKGHYEVVQYLLS--NGQM---DVNCQDDGGWTPMIWATEYKHVDLVK 128 (237)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHT--TTCC---CTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHh--CCCC---CcccCCCCCCCHHHHHHHcCCHHHHH
Confidence 344555555555555555555555555 3210 13444555555555555554444433
No 38
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.22 E-value=4.7e-12 Score=95.44 Aligned_cols=60 Identities=27% Similarity=0.354 Sum_probs=53.4
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.++++.|
T Consensus 28 ~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~----~~~~d~~g~t~l~~A~~~~~~~~~~~L 87 (93)
T 1n0q_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLE--AGAD----VNAKDKNGRTPLHLAARNGHLEVVKLL 87 (93)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CcccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 46789999999999999999999999999 7764 689999999999999999997766554
No 39
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.22 E-value=2.9e-12 Score=113.96 Aligned_cols=84 Identities=17% Similarity=0.105 Sum_probs=63.7
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC--------------CCCChHHHHHhhhCCCCccccccC
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD--------------GEGNNILHLAGKLAPPDRLNVVSG 68 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D--------------~~GnTpLHlAa~~~~~~~v~~L~g 68 (316)
..|.+|+||||+|+.+|+.+++++|++ .+++ +|.+| .+|+||||+|+..|+.++++.|
T Consensus 88 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L-- 159 (260)
T 3jxi_A 88 DVYYRGQTALHIAIERRCKHYVELLVE--KGAD----VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL-- 159 (260)
T ss_dssp CSSEESBCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH--
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHh--CCCC----cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH--
Confidence 345689999999999999999999999 7654 67787 6899999999999997766544
Q ss_pred chHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccc
Q 021201 69 SALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
++..-.+.+++.+|.+|+||++++..
T Consensus 160 --------------l~~~~~ga~~~~~d~~g~TpLh~A~~ 185 (260)
T 3jxi_A 160 --------------TENGHKQADLRRQDSRGNTVLHALVA 185 (260)
T ss_dssp --------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred --------------HhccccCCCCcccCCCCCcHHHHHHH
Confidence 11000234567777777777777653
No 40
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.21 E-value=4.9e-12 Score=112.99 Aligned_cols=87 Identities=20% Similarity=0.226 Sum_probs=71.1
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
++.+|.+|+||||+|+++|+.+++++|++ .+.... .+|.+|.+|+||||+|+..|+.++++.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~L-------------- 64 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLG--FSAGHE-YLDLQNDLGQTALHLAAILGEASTVEKL-------------- 64 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHH--HHTTSG-GGGCCCTTSCCHHHHHHHHTCHHHHHHH--------------
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHh--cCCCcc-cccccCCCCCCHHHHHHHcCCHHHHHHH--------------
Confidence 46789999999999999999999999999 665422 2589999999999999999997665544
Q ss_pred hHHHHhccchhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+.+++.+|.+|.||++++...
T Consensus 65 --l~---~ga~~~~~~~~g~tpL~~A~~~ 88 (282)
T 1oy3_D 65 --YA---AGAGVLVAERGGHTALHLACRV 88 (282)
T ss_dssp --HH---TTCCSSCCCTTSCCHHHHHTTT
T ss_pred --HH---cCCCCCCCCCCCCCHHHHHHHc
Confidence 11 2356788899999999988754
No 41
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.21 E-value=6.5e-12 Score=109.77 Aligned_cols=102 Identities=21% Similarity=0.166 Sum_probs=77.5
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCC-CCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTD-GEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D-~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
+..|..|+||||+|+.+|+.+++++|++ .+.. ++.+| .+|+||||+|+..++.++++.| .|
T Consensus 110 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (241)
T 1k1a_A 110 EARNYDGLTALHVAVNTECQETVQLLLE--RGAD----IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG 183 (241)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTS
T ss_pred cccCcCCCcHHHHHHHcCCHHHHHHHHH--cCCC----cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC
Confidence 4567889999999999999999999988 6553 57777 7889999999998888777655 22
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++.+.
T Consensus 184 ~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 226 (241)
T 1k1a_A 184 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226 (241)
T ss_dssp CBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhc
Confidence 34555555555566666654 467889999999999998765
No 42
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.20 E-value=7e-12 Score=111.32 Aligned_cols=84 Identities=19% Similarity=0.090 Sum_probs=65.2
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCC-------------CChHHHHHhhhCCCCccccccCc
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGE-------------GNNILHLAGKLAPPDRLNVVSGS 69 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~-------------GnTpLHlAa~~~~~~~v~~L~ga 69 (316)
+.|.+|+||||+|+++|+.+++++|++ .+++ +|.+|.+ |+||||+|+..|+.++++.|
T Consensus 85 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~L--- 155 (256)
T 2etb_A 85 DEFYQGHSALHIAIEKRSLQCVKLLVE--NGAD----VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYL--- 155 (256)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHH---
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHH---
Confidence 346789999999999999999999999 7654 6788876 99999999999987765544
Q ss_pred hHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccc
Q 021201 70 ALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
++..-.+.+++.+|.+|+||++++..
T Consensus 156 -------------l~~~~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 156 -------------LENPHQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp -------------HHCSSCCCCTTCCCTTSCCHHHHHHH
T ss_pred -------------HhccccCCCcCccCCCCCCHHHHHHH
Confidence 11000245677788888888887764
No 43
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.20 E-value=7.3e-12 Score=112.04 Aligned_cols=102 Identities=17% Similarity=0.086 Sum_probs=67.2
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------c
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------S 69 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------a 69 (316)
+.+|.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.++++.+ .| .
T Consensus 30 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t 103 (261)
T 2xai_A 30 NIITADHVSPLHEACLGGHLSCVKILLK--HGAQ----VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLAS 103 (261)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 4567778888888888888888888887 5543 577788888888888887777766554 12 2
Q ss_pred hHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+..+.++.++. +.+++.+|.+|.||++++...
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 144 (261)
T 2xai_A 104 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACEN 144 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHT
T ss_pred HHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHh
Confidence 3344444444455555543 355667777777777776543
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.19 E-value=9e-12 Score=106.12 Aligned_cols=59 Identities=20% Similarity=0.187 Sum_probs=42.6
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+.+|.+|+||||+|+++|+.+++++|++ .+.+ ++.+|.+|+||||+|+..++.++++.+
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~~L 91 (201)
T 3hra_A 33 DEVDTEGNTPLNIAVHNNDIEIAKALID--RGAD----INLQNSISDSPYLYAGAQGRTEILAYM 91 (201)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 4567777888888888888888888877 5543 577777788888888877776655443
No 45
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.19 E-value=9.2e-12 Score=109.20 Aligned_cols=107 Identities=17% Similarity=0.136 Sum_probs=80.8
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhh--hhhcccCCCCCChHHHHHhhhCCCCccccc--cC--------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIA--DLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~--~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-------- 68 (316)
++.+|..|+||||+|+++|+.+++++|++ .+... ...++..|.+|+||||+|+..++.++++.| .|
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 148 (236)
T 1ikn_D 71 PELRDFRGNTPLHLACEQGCLASVGVLTQ--SCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP 148 (236)
T ss_dssp SCCCCTTCCCHHHHHHHHTCHHHHHHHHH--STTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHh--cccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Confidence 35678899999999999999999999998 54321 123578899999999999999988777655 12
Q ss_pred ----chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 ----SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 ----aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 149 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~ 194 (236)
T 1ikn_D 149 CNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGR 194 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHcc
Confidence 34555555555666766664 467889999999999998764
No 46
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.18 E-value=4.2e-12 Score=100.49 Aligned_cols=81 Identities=20% Similarity=0.107 Sum_probs=64.5
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.+..|+|+||+|+++|+.+++++|++ .+.. +|.+|.+|+||||+|+..++.++++.| +
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~--~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L----------------l 60 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVA--KGED----VNRTLEGGRKPLHYAADCGQLEILEFL----------------L 60 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHH--TTCC----TTSCCTTSSCHHHHHHHTTCHHHHHHH----------------H
T ss_pred cccccchHHHHHHHcCCHHHHHHHHH--cCCC----cCccCCCCCcHHHHHHHcCCHHHHHHH----------------H
Confidence 46789999999999999999999999 6653 689999999999999999986655443 1
Q ss_pred HHhccchhhhhhccCCCCccccccch
Q 021201 84 KKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 84 ~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
-.+.+++.+|.+|+||++++...
T Consensus 61 ---~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 61 ---LKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---TTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ---HcCCCCCcCCCCCCCHHHHHHHc
Confidence 12356788999999999988754
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.18 E-value=8.4e-12 Score=112.00 Aligned_cols=84 Identities=19% Similarity=0.136 Sum_probs=67.4
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCC--------------CCChHHHHHhhhCCCCccccccCc
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDG--------------EGNNILHLAGKLAPPDRLNVVSGS 69 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~--------------~GnTpLHlAa~~~~~~~v~~L~ga 69 (316)
.|..|+||||+|+++|+.+++++|++ .+++ +|.+|. +|+||||+|+..|+.+++++|
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~--~ga~----~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L--- 167 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVE--NGAD----VQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL--- 167 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH---
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----cCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH---
Confidence 57789999999999999999999999 7654 677876 899999999999987665544
Q ss_pred hHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccch
Q 021201 70 ALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++....+.+++.+|.+|+||++++...
T Consensus 168 -------------l~~~~~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 168 -------------LQNSWQPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp -------------HHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred -------------HhcccCCCCceeeCCCCCcHHHHHHHc
Confidence 110002467888999999999988753
No 48
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.18 E-value=1.2e-11 Score=114.77 Aligned_cols=83 Identities=17% Similarity=0.023 Sum_probs=67.5
Q ss_pred cc-ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC---CCccccccCchHHhHHHh
Q 021201 2 WK-CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP---PDRLNVVSGSALQMQREL 77 (316)
Q Consensus 2 ~~-~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~---~~~v~~L~gaal~~~~el 77 (316)
+. +|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+ .+.+..+
T Consensus 124 n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~--~Gad----~n~~d~~g~TpLh~A~~~g~~~~~~~~~~l----------- 186 (327)
T 1sw6_A 124 NIPVDEHGNTPLHWLTSIANLELVKHLVK--HGSN----RLYGDNMGESCLVKAVKSVNNYDSGTFEAL----------- 186 (327)
T ss_dssp CSCCSTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTBCCTTCCCHHHHHHHSSHHHHTTCHHHH-----------
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHhcccccHHHHHHH-----------
Confidence 45 79999999999999999999999999 7764 79999999999999999887 4443322
Q ss_pred hhHhHHHHhccchhhhhhccCCCCccccccc
Q 021201 78 LWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 78 ~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
++... ..++.+|.+|+||++++..
T Consensus 187 -----l~~~~--~~~~~~d~~g~tpLh~A~~ 210 (327)
T 1sw6_A 187 -----LDYLY--PCLILEDSMNRTILHHIII 210 (327)
T ss_dssp -----HHHHG--GGGGEECTTCCCHHHHHHH
T ss_pred -----HHhhh--ccccCCCCCCCCHHHHHHH
Confidence 22111 3578899999999998865
No 49
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.18 E-value=6.3e-12 Score=103.13 Aligned_cols=95 Identities=21% Similarity=0.128 Sum_probs=74.0
Q ss_pred CCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHHhH
Q 021201 8 RYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQMQ 74 (316)
Q Consensus 8 G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~~~ 74 (316)
+.|+||.|+++|+.+++++|++ .+.. ++ .|.+|+||||+|+..|+.++++.+ .| .+++..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~--~g~~----~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMA--NGAP----FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH--HTCC----CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHH--cCCC----CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 4689999999999999999999 6653 33 699999999999999998877665 22 345555
Q ss_pred HHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 75 RELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 75 ~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
...+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 75 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 110 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEH 110 (153)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 55555666666664 467888999999999987654
No 50
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.18 E-value=2.8e-12 Score=118.32 Aligned_cols=81 Identities=26% Similarity=0.384 Sum_probs=68.3
Q ss_pred ccCCCCcHHhHHHHC---CCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 4 CDENRYTIFHIAVSN---RQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~---~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
.|..|+||||+|+.. ++.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~--~gad----vn~~d~~G~TpLh~A~~~g~~~~v~~L-------------- 245 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQ--NGGH----LDAKAADGNTALHYAALYNQPDCLKLL-------------- 245 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHH--HSSC----TTCCCTTCCCHHHHHHHTTCHHHHHHH--------------
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHh--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHH--------------
Confidence 588999999999997 89999999999 7764 799999999999999999997766554
Q ss_pred hHHHHhccchhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+++++.+|.+|+||++++...
T Consensus 246 --l~---~gad~~~~d~~G~TpL~~A~~~ 269 (301)
T 2b0o_E 246 --LK---GRALVGTVNEAGETALDIARKK 269 (301)
T ss_dssp --HH---TTCCCSCCCTTSCCHHHHHHHH
T ss_pred --HH---cCCCCCCcCCCCCCHHHHHHHc
Confidence 11 2456788999999999998764
No 51
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.17 E-value=1.1e-11 Score=115.16 Aligned_cols=87 Identities=17% Similarity=0.169 Sum_probs=67.5
Q ss_pred CccccCCCCcHHhHHHH----CCCHHHHHHHhhcchhhhh----------------------------------------
Q 021201 1 MWKCDENRYTIFHIAVS----NRQVELFKFIDADDMKAIA---------------------------------------- 36 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~----~~~~~iv~~Ll~~~~~~~~---------------------------------------- 36 (316)
++.+|.+|+||||+|++ +|+.+++++|++ .+...
T Consensus 194 ~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~--~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~L 271 (327)
T 1sw6_A 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLD--ILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWI 271 (327)
T ss_dssp GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHH--HHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHH
T ss_pred ccCCCCCCCCHHHHHHHHccccccHHHHHHHHH--HHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHH
Confidence 35679999999999999 999999999998 53210
Q ss_pred -hhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHHHhccchhhhhhccCCCCccccccc
Q 021201 37 -DLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVKKVVPRKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 37 -~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+..+|.+|.+|+||||+|+..|+.+++++| ++ .+++++.+|++|+||++++.+
T Consensus 272 l~~~~n~~d~~G~TpLh~A~~~g~~~~v~~L----------------l~---~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 272 IANMLNAQDSNGDTCLNIAARLGNISIVDAL----------------LD---YGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HHHTTTCCCTTSCCHHHHHHHHCCHHHHHHH----------------HH---TTCCTTCCCTTSCCGGGGTCC
T ss_pred HHhCCCCCCCCCCCHHHHHHHcCCHHHHHHH----------------HH---cCCCCcccCCCCCCHHHHHHh
Confidence 002688889999999999998886665444 11 246789999999999999864
No 52
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.17 E-value=6.5e-12 Score=98.04 Aligned_cols=77 Identities=21% Similarity=0.195 Sum_probs=62.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
++.+|..|+||||+|+.+++.+++++|++ .+.+ ++.+|.+|+||||+|+..++.++++.|
T Consensus 35 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~d~~g~tpl~~A~~~~~~~~~~~L-------------- 94 (115)
T 2l6b_A 35 VNARSKDGNTPLHLAAKNGHAEIVKLLLA--KGAD----VNARSKDGNTPEHLAKKNGHHEIVKLL-------------- 94 (115)
T ss_dssp SSCCCSSSCCTTHHHHTTTCHHHHHHHTT--TTCC----TTCCCTTCCCTTHHHHTTTCHHHHHHH--------------
T ss_pred CCCcCCCCCCHHHHHHHcCcHHHHHHHHH--cCCC----CcccCCCCCCHHHHHHHCCCHHHHHHH--------------
Confidence 45678999999999999999999999999 7654 689999999999999999986655443
Q ss_pred hHHHHhc-cchhhhhhccCCCCcc
Q 021201 81 QAVKKVV-PRKLAEAKNKKGLTPR 103 (316)
Q Consensus 81 ~~v~~lv-~~~~~~~~N~~G~Tp~ 103 (316)
+ .+.+++.++.+|.+|.
T Consensus 95 ------l~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 95 ------DAKGADVNARSWGSSHHH 112 (115)
T ss_dssp ------HTTSSSHHHHSCCCC---
T ss_pred ------HHcCCCCCcCCccccccc
Confidence 2 2467888899998884
No 53
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.17 E-value=9.4e-12 Score=102.67 Aligned_cols=96 Identities=11% Similarity=0.050 Sum_probs=55.2
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCCh-HHHHHhhhCCCCccccc--cC----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNN-ILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnT-pLHlAa~~~~~~~v~~L--~g---------- 68 (316)
+.+|..|+||||+|+ +|+.+++++|++ .+.+ +|.+|.+|+| |||+|+..++.+++++| .|
T Consensus 39 ~~~~~~g~t~L~~A~-~~~~~~v~~Ll~--~g~~----~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g 111 (156)
T 1bi7_B 39 NAPNSYGRRPIQVMM-MGSARVAELLLL--HGAE----PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG 111 (156)
T ss_dssp TCCCSSSCCTTTSSC-TTCHHHHHHHHT--TTCC----CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTC
T ss_pred CCCCCCCCCHHHHHH-cCCHHHHHHHHH--cCCC----CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCC
Confidence 456777888888874 788888888887 5543 6778888887 88888888877766654 12
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccc
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRA 104 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~ 104 (316)
.+++.....+..+.++.++. +.+++.+|.+|.||.+
T Consensus 112 ~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 112 RLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE 149 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred CCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence 34455545555566666664 4678899999999876
No 54
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.17 E-value=1e-11 Score=111.09 Aligned_cols=100 Identities=19% Similarity=0.110 Sum_probs=78.9
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------chH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------SAL 71 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------aal 71 (316)
.+.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .| .++
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L 170 (261)
T 2xai_A 97 PESDLASPIHEAARRGHVECVNSLIA--YGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPL 170 (261)
T ss_dssp CSCTTCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHH
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHH--cCCC----CCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChH
Confidence 35669999999999999999999999 6653 688999999999999999988877665 22 345
Q ss_pred HhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 72 QMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 72 ~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+.....+..+.++.++. +.+++.+|++|+||++++.+.
T Consensus 171 h~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 171 HAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhcccc
Confidence 55555555566666654 577899999999999998743
No 55
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.17 E-value=2.7e-11 Score=110.21 Aligned_cols=101 Identities=22% Similarity=0.118 Sum_probs=75.5
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+++|+.+++++|++ .+.+ +|.+ +|+||||+|+..|+.++++.| .|
T Consensus 24 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g 95 (285)
T 3kea_A 24 TFKADVHGHSASYYAIADNNVRLVCTLLN--AGAL----KNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKG 95 (285)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTGG----GSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTS
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHh--CCCC----CCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC
Confidence 46789999999999999999999999999 7653 5666 499999999999998887765 22
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCC-CCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKG-LTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G-~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+| .||++.+...
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~ 139 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVML 139 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHc
Confidence 23444444445555555553 45677777777 6888776543
No 56
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.16 E-value=1.4e-11 Score=107.56 Aligned_cols=64 Identities=20% Similarity=0.174 Sum_probs=49.5
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|++|+||||+|+++|+.+++++|++ ........+|.+|.+|+||||+|+..|+.++++.|
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 65 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVN--LFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHH--HHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHH--HHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHH
Confidence 35789999999999999999999999987 42222234789999999999999999998776654
No 57
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.16 E-value=7.5e-12 Score=109.78 Aligned_cols=105 Identities=18% Similarity=0.161 Sum_probs=62.1
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------c
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------S 69 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------a 69 (316)
.+|.+|+||||+|+.+|+.+++++|++ .+......+|.+|.+|+||||+|+..++.++++.| .| .
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t 80 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIR--QVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNT 80 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-------CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHH--HhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCC
Confidence 567777888888888887777777777 44322123577777778888888777777766655 22 2
Q ss_pred hHHhHHHhhhHhHHHHhccc-------hhhhhhccCCCCccccccch
Q 021201 70 ALQMQRELLWFQAVKKVVPR-------KLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~~-------~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+..+.++.++.. ...+.+|.+|.||++++...
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 127 (236)
T 1ikn_D 81 PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 127 (236)
T ss_dssp HHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHc
Confidence 34444444444555544432 22566777888888877654
No 58
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.16 E-value=1.6e-11 Score=106.20 Aligned_cols=103 Identities=24% Similarity=0.199 Sum_probs=75.3
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|..|+||||+|+++|+.+++++|++ .+.. .++.+|.+|.||||+|+..++.++++.+ .|
T Consensus 52 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~---~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 126 (223)
T 2f8y_A 52 NIQDNMGRTPLHAAVSADAQGVFQILIR--NRAT---DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 126 (223)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH--BTTS---CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC---CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCC
Confidence 5678889999999999999999999988 5431 2578888899999999988887776654 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|.||++++...
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 168 (223)
T 2f8y_A 127 SALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAARE 168 (223)
T ss_dssp BHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHc
Confidence 34455544455566666553 456778888899998887654
No 59
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.16 E-value=1.6e-11 Score=106.92 Aligned_cols=102 Identities=18% Similarity=0.237 Sum_probs=81.5
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.| .|
T Consensus 34 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 107 (231)
T 3aji_A 34 TRTDQDSRTALHWACSAGHTEIVEFLLQ--LGVP----VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGC 107 (231)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----SCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred hcCCCCCCCHHHHHHHcCcHHHHHHHHH--hCCC----CCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCC
Confidence 4578999999999999999999999999 6653 689999999999999999998887765 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+.+.+|.+|.||++.+...
T Consensus 108 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 34555555555666666654 456788999999999988654
No 60
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.14 E-value=3.1e-12 Score=105.63 Aligned_cols=100 Identities=11% Similarity=0.106 Sum_probs=78.5
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------c
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------S 69 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------a 69 (316)
..++.|+|+||+|+++|+.+++++|++ .+.. +|.+|.+|+||||+|+ .++.++++.| .| .
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~t 79 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLE--AGAN----PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLT 79 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHT--TTCC----TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence 467889999999999999999999999 6653 6899999999999985 7777776654 11 3
Q ss_pred -hHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 70 -ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 70 -al~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEEL 121 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHh
Confidence 6776666666677776664 467889999999999988654
No 61
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.14 E-value=3.4e-11 Score=107.06 Aligned_cols=126 Identities=15% Similarity=0.163 Sum_probs=90.6
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC------------
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG------------ 68 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g------------ 68 (316)
..|.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .|
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 125 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLLE--ASAD----ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGT 125 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCC
Confidence 358899999999999999999999999 7654 689999999999999999998877655 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccchh-hh----hhhhhcc--cccccchhHHHHHHH
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQH-RD----LKEKGEK--WMKDTASSCMIVATL 134 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~~-~~----l~~~~~k--~lk~t~~s~lvvA~L 134 (316)
.+++.....+..+.++.++. +.+++.+|.+|.||++++.... .+ +.+.+.+ .......+.+..|+.
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 126 TPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp CHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 34555555455556666654 4678899999999999986542 22 3333322 122344555666654
No 62
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.14 E-value=2.3e-11 Score=110.51 Aligned_cols=100 Identities=10% Similarity=-0.000 Sum_probs=60.3
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+.. +|.+|.+|+||||+|+..|+.++++.| .|
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~ 126 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLIS--QGWA----VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWH 126 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHH--TTCC----SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCC
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 4567777888888888888888887777 5543 577777777777777777777666554 12
Q ss_pred chHHhHHHhhhHhHHHHhccc-hhhhhhccCCCCccccccc
Q 021201 69 SALQMQRELLWFQAVKKVVPR-KLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~~-~~~~~~N~~G~Tp~~l~~~ 108 (316)
.+++.....+..+.++.++.. ...+. +.+|.||++++..
T Consensus 127 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~ 166 (285)
T 3d9h_A 127 TPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAAR 166 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTSCHHHHHHH
T ss_pred CHHHHHHHcCHHHHHHHHHHCCCCCCC-CCCCCCHHHHHHH
Confidence 234443333444444444432 22222 3346677666544
No 63
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.14 E-value=1.8e-11 Score=110.82 Aligned_cols=81 Identities=15% Similarity=0.147 Sum_probs=42.2
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
+.+|.+|+||||+|+++|+.+++++|++ .+++ ++.+|.+|.||||.|+..++.++++
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~--~~a~----~~~~~~~g~t~l~~a~~~~~~~~~~----------------- 136 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLK--HGAN----AGARNADQAVPLHLACQQGHFQVVK----------------- 136 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHHTCHHHHH-----------------
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHh--cCCC----cCccCCCCCCccccccccChHHHHH-----------------
Confidence 3445555555555555555555555555 4332 3455555555555555555544333
Q ss_pred HHHHhcc-chhhhhhccCCCCccccccc
Q 021201 82 AVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 82 ~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
.++. +.+++.+|.+|.||++++..
T Consensus 137 ---~Ll~~g~~~n~~d~~g~TpL~~A~~ 161 (269)
T 4b93_B 137 ---CLLDSNAKPNKKDLSGNTPLIYACS 161 (269)
T ss_dssp ---HHHHTTCCSCCCCTTCCCHHHHHHH
T ss_pred ---HHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 2221 24455666666666666543
No 64
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.14 E-value=1e-11 Score=108.27 Aligned_cols=85 Identities=16% Similarity=0.103 Sum_probs=65.6
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhH
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQA 82 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~ 82 (316)
..|.+|+||||+|+++|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+.+..+
T Consensus 116 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~ga~----~~~~d~~g~t~L~~A~~~~~~~~~~~i---------------- 173 (232)
T 2rfa_A 116 NLIYYGEHPLSFAACVGSEEIVRLLIE--HGAD----IRAQDSLGNTVLHILILQPNKTFACQM---------------- 173 (232)
T ss_dssp CSCCCCSSHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHTCSCHHHHHHH----------------
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCChHHHHHH----------------
Confidence 345689999999999999999999999 7764 799999999999999999986654111
Q ss_pred HHHhcc-chh------hhhhccCCCCccccccch
Q 021201 83 VKKVVP-RKL------AEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 83 v~~lv~-~~~------~~~~N~~G~Tp~~l~~~~ 109 (316)
++.++. +.. .+.+|++|+||++++.+.
T Consensus 174 ~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 174 YNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 111111 111 268899999999998765
No 65
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.14 E-value=8e-12 Score=102.43 Aligned_cols=97 Identities=12% Similarity=0.088 Sum_probs=73.4
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQM 73 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~~ 73 (316)
+|.|+||.|+++|+.+++++|++ ... ..++.+|.+|+||||+ +..|+.++++.+ .| .+++.
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~--~~~---~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLH--REL---VHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHD 74 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH--TTC---CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcchHHHHHHHhCCHHHHHHHHH--hhC---cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 46799999999999999999999 521 1268999999999999 888988877655 22 34455
Q ss_pred HHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 74 QRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 74 ~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 111 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQE 111 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHH
T ss_pred HHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHh
Confidence 555555666666654 457788889999999987654
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.14 E-value=6.6e-12 Score=103.43 Aligned_cols=97 Identities=12% Similarity=0.191 Sum_probs=75.4
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHH
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQ 72 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~ 72 (316)
+...|+||.|+++|+.+++++|++ .+.. +|.+|.+|+||||+|+. ++.++++.+ .| .+++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~--~~~~----~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQ--NNVN----VNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIH 75 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTT--SCCC----TTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHh--CCCC----ccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 457899999999999999999999 6653 68999999999999999 888877655 22 3455
Q ss_pred hHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 73 MQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 73 ~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 76 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 113 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKE 113 (162)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 5555555666666664 467888999999999987654
No 67
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.14 E-value=1e-11 Score=122.07 Aligned_cols=81 Identities=26% Similarity=0.396 Sum_probs=68.3
Q ss_pred ccCCCCcHHhHHHH---CCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 4 CDENRYTIFHIAVS---NRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 4 ~D~~G~T~LH~Av~---~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
.|..|+||||+|+. +|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 167 ~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~--~ga~----vn~~d~~g~TpLh~A~~~g~~~~v~~L-------------- 226 (497)
T 3lvq_E 167 AQAPEELVLHLAVKVANQASLPLVDFIIQ--NGGH----LDAKAADGNTALHYAALYNQPDCLKLL-------------- 226 (497)
T ss_dssp SCCSCBCHHHHHHHTCCTTTHHHHHHHHH--HSCC----TTCCCSSSCCHHHHHTTTTCHHHHHHH--------------
T ss_pred cccccchHHHHHHHhcccccHHHHHHHHH--cCCC----CCccCCCCCcHHHHHHHcCCHHHHHHH--------------
Confidence 37889999999977 999999999999 7764 799999999999999999997766554
Q ss_pred hHHHHhccchhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+++++.+|++|+||++++...
T Consensus 227 --l~---~ga~~~~~d~~g~tpl~~A~~~ 250 (497)
T 3lvq_E 227 --LK---GRALVGTVNEAGETALDIARKK 250 (497)
T ss_dssp --HH---TCCCCSCCCTTCCCHHHHHHHT
T ss_pred --HH---cCCCCCCcCCCCCCHHHHHHHc
Confidence 11 2467888999999999988654
No 68
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.13 E-value=1.2e-11 Score=118.22 Aligned_cols=102 Identities=17% Similarity=0.168 Sum_probs=78.4
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+..|..|+||||+|+++|+.+++++|++ .+.. +|.+|..|+||||+|+..|+.++++.| .|
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~ 345 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIK--HGVM----VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY 345 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHH--HTCC----TTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHh--CCcc----CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCC
Confidence 4568889999999999999999999998 7653 688999999999999999998877765 22
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.|+.++. +++++.+|.+|+||++++.+.
T Consensus 346 t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 346 SPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred CHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 34455555555565666553 467788888999999887654
No 69
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.13 E-value=1.7e-11 Score=110.79 Aligned_cols=82 Identities=24% Similarity=0.265 Sum_probs=49.9
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.++
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~~~~~~~g~tpL~~A~~~g~~~~------------------- 121 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLVE--NGAN----INQPDNEGWIPLHAAASCGYLDI------------------- 121 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHH-------------------
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCCCCCCCcHHHHHHHcCCHHH-------------------
Confidence 3445555666666666666666666655 4432 45555556666666665555443
Q ss_pred HHHHhcc-chhhhhhccCCCCccccccch
Q 021201 82 AVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 82 ~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++.++. +.+++.+|.+|.||++++...
T Consensus 122 -v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 149 (299)
T 1s70_B 122 -AEYLISQGAHVGAVNSEGDTPLDIAEEE 149 (299)
T ss_dssp -HHHHHHTTCCTTCCCTTSCCHHHHCCSH
T ss_pred -HHHHHhCCCCCCCcCCCCCCHHHHHHhc
Confidence 333332 456788899999999988654
No 70
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.13 E-value=3.6e-11 Score=100.20 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=68.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|..|+||||+|+.+|+.+++++|++ .+.. +|.+|.+|+||||+|+..++.++++.| .|
T Consensus 62 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 135 (172)
T 3v30_A 62 PHILAKERESALSLASTGGYTDIVGLLLE--RDVD----INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSG 135 (172)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHT--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred chhhcccCCCHHHHHHHCCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 35678899999999999999999999999 7654 689999999999999999998887765 23
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCc
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTP 102 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp 102 (316)
.+++.....++.+.++.++. ......+|..|.||
T Consensus 136 ~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 136 YTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred CCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 34555555555555555543 24566677778777
No 71
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.12 E-value=2.6e-11 Score=110.21 Aligned_cols=98 Identities=19% Similarity=0.112 Sum_probs=77.0
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------chHH
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------SALQ 72 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------aal~ 72 (316)
+.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| .| .+++
T Consensus 154 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~ 227 (285)
T 3d9h_A 154 ESDLASPIHEAARRGHVECVNSLIA--YGGN----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLH 227 (285)
T ss_dssp SCTTSCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHH
Confidence 5569999999999999999999998 6653 688999999999999999988877665 22 3445
Q ss_pred hHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 73 MQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 73 ~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
.....+..+.++.++. +.+++.+|++|+||++++..
T Consensus 228 ~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 228 AVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 5555555566666653 57789999999999999884
No 72
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.11 E-value=3.5e-11 Score=104.10 Aligned_cols=99 Identities=15% Similarity=0.137 Sum_probs=70.7
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC------------c
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG------------S 69 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g------------a 69 (316)
.|.+|+||||+|+++|+.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.+ .+ .
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t 94 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLE--ASAD----ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTT 94 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCC
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCc
Confidence 48899999999999999999999999 6653 689999999999999999998776554 11 2
Q ss_pred hHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 70 ALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 70 al~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+++.....+..+.++.++. +.+++.+|.+|.||++.+..
T Consensus 95 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 134 (223)
T 2f8y_A 95 PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAA 134 (223)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred HHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHH
Confidence 3333333333444444442 24556666666677666543
No 73
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.11 E-value=3.2e-11 Score=109.71 Aligned_cols=101 Identities=12% Similarity=0.024 Sum_probs=56.1
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCC-ChHHHHHhhhCCCCccccc--cC----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEG-NNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~G-nTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
+.+|..|+||||+|+.+|+.+++++|++ .+++ ++.+|.+| +||||+|+..|+.++++.| .|
T Consensus 89 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~ga~----~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~ 162 (285)
T 3kea_A 89 SQFDDKGNTALYYAVDSGNMQTVKLFVK--KNWR----LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILL 162 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH--HCGG----GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTHH
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHh--cCCC----CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCCc
Confidence 3456666666666666666666666666 5443 45666666 5666666666666555444 11
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCc-cccccc
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTP-RALFSE 108 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp-~~l~~~ 108 (316)
.+++.....+..+.++.++. +.+++.+|.+|+|| ++++..
T Consensus 163 t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~ 204 (285)
T 3kea_A 163 SCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAID 204 (285)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHH
T ss_pred cHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHH
Confidence 22333333333444444442 34566666666665 666544
No 74
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.11 E-value=1.7e-11 Score=104.41 Aligned_cols=104 Identities=15% Similarity=0.120 Sum_probs=73.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|..|+||||+|+.+|+.+++++|++ .+.. .++.+|.+|+||||+|+..++.++++.| .|
T Consensus 65 ~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~--~~~~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 139 (201)
T 3hra_A 65 INLQNSISDSPYLYAGAQGRTEILAYMLK--HATP---DLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDF 139 (201)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--HSCC---CTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTT
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHh--ccCc---ccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCC
Confidence 35678889999999999999999999996 3321 2688999999999999999988887765 22
Q ss_pred --chHHhHHHhhh-----HhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 --SALQMQRELLW-----FQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 --aal~~~~el~w-----~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++....... .+.++.++. +.+++.+|.+|+||++++...
T Consensus 140 g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 140 GYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp SCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHc
Confidence 23333332221 344554443 466788888899998887654
No 75
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.10 E-value=2.4e-11 Score=111.53 Aligned_cols=102 Identities=16% Similarity=0.141 Sum_probs=73.4
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.++++.| .|
T Consensus 51 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g 124 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQ--HGAD----VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQ 124 (351)
T ss_dssp CCCSSTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTC
T ss_pred cccCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Confidence 35678999999999999999999999999 7654 689999999999999999998877665 12
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
.+++.....+..+.++.++. +.+.+.+|.+|.||++++..
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPT 166 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSS
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhh
Confidence 23333333344444444443 24455666666666665543
No 76
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.10 E-value=2.6e-11 Score=115.23 Aligned_cols=83 Identities=19% Similarity=0.166 Sum_probs=68.1
Q ss_pred cccc--CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhh
Q 021201 2 WKCD--ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLW 79 (316)
Q Consensus 2 ~~~D--~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w 79 (316)
+..| .+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+++++|
T Consensus 227 n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~--~Gad----vn~~d~~G~TpLh~A~~~g~~~~v~~L------------- 287 (368)
T 3jue_A 227 NWVNGGQDNATPLIQATAANSLLACEFLLQ--NGAN----VNQADSAGRGPLHHATILGHTGLACLF------------- 287 (368)
T ss_dssp TCCCTTTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH-------------
T ss_pred CccccccCCCCHHHHHHHCCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCcHHHHHHH-------------
Confidence 4455 789999999999999999999999 7664 789999999999999999987665544
Q ss_pred HhHHHHhccchhhhhhccCCCCccccccch
Q 021201 80 FQAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 80 ~~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+++++.+|.+|+||++++...
T Consensus 288 ---L~---~Gad~~~~d~~G~TpL~~A~~~ 311 (368)
T 3jue_A 288 ---LK---RGADLGARDSEGRDPLTIAMET 311 (368)
T ss_dssp ---HH---TTCCTTCCCTTSCCHHHHHHHT
T ss_pred ---HH---CcCCCCCcCCCCCCHHHHHHHC
Confidence 11 2457788999999999998754
No 77
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.09 E-value=8.3e-12 Score=108.73 Aligned_cols=60 Identities=13% Similarity=0.145 Sum_probs=51.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcch-hhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDM-KAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~-~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|..|+||||+|+.+|+.+++++|++ . +.+ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 99 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~~g~~----~~~~d~~g~tpL~~A~~~~~~~~v~~L 159 (222)
T 3ehr_A 99 VNGLDKAGSTALYWACHGGHKDIVEMLFT--QPNIE----LNQQNKLGDTALHAAAWKGYADIVQLL 159 (222)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHTT--STTCC----CCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHc--CCCCC----ccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 35678899999999999999999999998 6 443 689999999999999999998877665
No 78
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.09 E-value=1.9e-11 Score=114.21 Aligned_cols=102 Identities=16% Similarity=0.131 Sum_probs=80.8
Q ss_pred ccccCCCCcHHhHHHHCC--CHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC---------
Q 021201 2 WKCDENRYTIFHIAVSNR--QVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG--------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~--~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g--------- 68 (316)
+..|.+|+||||+|+.+| +.+++++|++ .+++ +|.+|.+|+||||+|+..|+.++++.| .|
T Consensus 132 ~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~--~ga~----~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 205 (364)
T 3ljn_A 132 HVKHCKGQTALHWCVGLGPEYLEMIKILVQ--LGAS----PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLD 205 (364)
T ss_dssp EEEEESCCCHHHHHHHSCGGGHHHHHHHHH--HTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTT
T ss_pred ccCCCCCCCHHHHHHHcCCchHHHHHHHHH--cCCC----CcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccc
Confidence 457888999999999999 9999999999 7654 689999999999999999988877655 12
Q ss_pred -------chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -------SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -------aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....++.+.++.++. +.+++.+|.+|+||++++...
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRA 254 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHT
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHh
Confidence 34455555556666777664 467899999999999998765
No 79
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.09 E-value=5.9e-11 Score=102.85 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=35.9
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhccc-CCCCCChHHHHHhhhCCCCccccc
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDS-TDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~-~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
+|.+|+||||+|+++|+.+++++|++ .+...+ ++. .|.+|+||||+|+..++.++++.+
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~L 91 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLS--KMENVN--LDDYPDDSGWTPFHIACSVGNLEVVKSL 91 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHH--TCTTCC--GGGCCCTTSCCHHHHHHHHCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh--cccccc--ccccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 56667777777777777777777776 432111 233 666777777777776665554433
No 80
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.09 E-value=3.2e-11 Score=107.03 Aligned_cols=86 Identities=21% Similarity=0.324 Sum_probs=61.1
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcc-hhhhhhhhcccCCCCCChHHHHHhhh--CCCCccccccCchHHhHHHhhhHhHH
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADD-MKAIADLLVDSTDGEGNNILHLAGKL--APPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~-~~~~~~~lin~~D~~GnTpLHlAa~~--~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.|+||||+|+++|+.+++++|++.. .++ .+|.+|.+|+||||+|+.. ++.+....+ .+.+
T Consensus 135 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga----~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~-------------~~iv 197 (256)
T 2etb_A 135 FGELPLSLAACTKQWDVVTYLLENPHQPA----SLEATDSLGNTVLHALVMIADNSPENSALV-------------IHMY 197 (256)
T ss_dssp SCSSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSCHHHHHHH-------------HHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhccccCC----CcCccCCCCCCHHHHHHHcccCCchhhHHH-------------HHHH
Confidence 3999999999999999999999921 122 2689999999999999994 443311000 0112
Q ss_pred HHhcc-chhh-------hhhccCCCCccccccch
Q 021201 84 KKVVP-RKLA-------EAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 84 ~~lv~-~~~~-------~~~N~~G~Tp~~l~~~~ 109 (316)
+.++. +.++ +.+|.+|+||++++...
T Consensus 198 ~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp HHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence 22222 2445 88999999999998765
No 81
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.08 E-value=3e-11 Score=107.26 Aligned_cols=89 Identities=17% Similarity=0.196 Sum_probs=63.5
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcc-hhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHH
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADD-MKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVK 84 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~-~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~ 84 (316)
..|+||||+|+.+|+.+++++|++.+ .++ .+|.+|.+|+||||+|+..++...-.. ....+.++
T Consensus 138 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----~~~~~d~~g~TpLh~A~~~~~~~~~~~-----------~~~~~~v~ 202 (260)
T 3jxi_A 138 YFGELPLSLAACTNQPHIVHYLTENGHKQA----DLRRQDSRGNTVLHALVAIADNTRENT-----------KFVTKMYD 202 (260)
T ss_dssp CSCSSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSSHHHH-----------HHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhccccCC----CCcccCCCCCcHHHHHHHhccCchhHH-----------HHHHHHHH
Confidence 67999999999999999999999922 222 269999999999999999877321000 00012233
Q ss_pred Hhcc-chhh-------hhhccCCCCccccccch
Q 021201 85 KVVP-RKLA-------EAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 85 ~lv~-~~~~-------~~~N~~G~Tp~~l~~~~ 109 (316)
.++. +.++ +.+|.+|+||++++...
T Consensus 203 ~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 235 (260)
T 3jxi_A 203 LLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKT 235 (260)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHhCcccccccchhhcccCCCCCHHHHHHHc
Confidence 3332 2334 67999999999998765
No 82
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.08 E-value=6e-11 Score=103.58 Aligned_cols=102 Identities=15% Similarity=0.223 Sum_probs=74.1
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++.+|.+|+||||+|+++|+.+++++|++ .+.. ++..|.+|+||||+|+..|+.++++.+ .|
T Consensus 4 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 77 (237)
T 3b7b_A 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQ--AGAN----IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEG 77 (237)
T ss_dssp CCCSSCCSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTS
T ss_pred cccccCCCCCHHHHHHHcCcHHHHHHHHH--cCCC----cCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCC
Confidence 35678999999999999999999999999 6653 688999999999999999998777655 11
Q ss_pred -chHHhHHHhhhHhHHHHhccc--hhhhhhccCCCCccccccc
Q 021201 69 -SALQMQRELLWFQAVKKVVPR--KLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~~--~~~~~~N~~G~Tp~~l~~~ 108 (316)
.+++.....+..+.++.++.. ...+.+|.+|.||++.+..
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 120 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Confidence 233343334444555555432 4556666777777766544
No 83
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.08 E-value=3.9e-11 Score=99.49 Aligned_cols=96 Identities=17% Similarity=0.116 Sum_probs=68.4
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chHHh
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SALQM 73 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal~~ 73 (316)
.|+||||.|+++|+.+++++|++ .+.. +|.+|.+|+||||+|+..++.++++.+ .| .+++.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~--~~~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIE--QENV----INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHH--HSSC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHH--cCCC----cCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 68999999999999999999999 6643 689999999999999999998776654 11 23333
Q ss_pred HHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 74 QRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 74 ~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
....+..+.++.++. +.+++.+|.+|.||++++..
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 111 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVH 111 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHH
Confidence 333333444444443 24556666666666666543
No 84
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.07 E-value=2.8e-11 Score=109.64 Aligned_cols=103 Identities=17% Similarity=0.142 Sum_probs=72.4
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhh-----CCCCccccc----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKL-----APPDRLNVV---------- 66 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~-----~~~~~v~~L---------- 66 (316)
+.+|.+|+||||+|+.+|+.+++++|++ .+.. .+|.+|.+|.||||+|+.. ++.++++.+
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~--~g~~---~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~ 179 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLLD--SGVC---KVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKA 179 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHH--TSCC---CTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCC
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHHH--CCCC---cCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcccc
Confidence 5679999999999999999999999999 6641 2688999999999999953 222222221
Q ss_pred ---cCchHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 67 ---SGSALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 67 ---~gaal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
...+++.....+..+.++.++. +.+++.+|.+|+||++++...
T Consensus 180 ~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~ 226 (276)
T 4hbd_A 180 SQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEH 226 (276)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHC
Confidence 1144555555555555665553 456777777788887776543
No 85
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.07 E-value=5.7e-11 Score=109.49 Aligned_cols=78 Identities=17% Similarity=0.132 Sum_probs=61.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+++++|
T Consensus 219 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~--~gad----~~~~d~~G~TpL~~A~~~~~~~iv~~L-------------- 278 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALYNQPDCLKLLLK--GRAL----VGTVNEAGETALDIARKKHHKECEELL-------------- 278 (301)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----CSCCCTTSCCHHHHHHHHTCHHHHHHH--------------
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH--------------
Confidence 46789999999999999999999999999 7764 799999999999999999997665544
Q ss_pred hHHHHhccchhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+.....|.||++++.+.
T Consensus 279 -----------l~~ga~~g~tpLh~A~~~ 296 (301)
T 2b0o_E 279 -----------EQAQAGTFAFPLHVDYSW 296 (301)
T ss_dssp -----------HHHHHHTTSSCCC-----
T ss_pred -----------HHhcCCCCCChhHHHHhc
Confidence 112223689999998754
No 86
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.07 E-value=5.9e-11 Score=92.43 Aligned_cols=59 Identities=22% Similarity=0.240 Sum_probs=52.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNV 65 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~ 65 (316)
++.+|..|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+++++
T Consensus 50 i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~--~ga~----~~~~d~~g~tpl~~A~~~~~~~~~~~ 108 (110)
T 2zgd_A 50 VAAKDKNGSTPLHLAARNGHLEVVKLLLE--AGAD----VXAQDKFGKTAFDISIDNGNEDLAEI 108 (110)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred CCccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----ccccccCCCcHHHHHHHcCCHHHHHH
Confidence 46688999999999999999999999999 7654 68999999999999999998765543
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.06 E-value=3.4e-11 Score=94.31 Aligned_cols=60 Identities=27% Similarity=0.354 Sum_probs=52.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|..|+||||+|+.+++.+++++|++ .+.. ++.+|.+|+||||+|+..++.++++.+
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~~L 87 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLE--AGAD----VNAKDKNGRTPLHLAARNGHLEVVKLL 87 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHH--cCCC----CcccCCCCCcHHHHHHHcChHHHHHHH
Confidence 35678999999999999999999999999 6653 689999999999999999998777655
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.06 E-value=1.4e-11 Score=99.29 Aligned_cols=81 Identities=21% Similarity=0.104 Sum_probs=65.6
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.+..|+|+||+|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.| +
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L----------------l 67 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMA--NGAD----VNAKDEYGLTPLYLATAHGHLEIVEVL----------------L 67 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH----------------H
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH----------------H
Confidence 35568999999999999999999999 6653 689999999999999999986655443 1
Q ss_pred HHhccchhhhhhccCCCCccccccch
Q 021201 84 KKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 84 ~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+ .+.+++.+|.+|.||++++...
T Consensus 68 ~---~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 68 K---NGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp H---TTCCTTCCCTTCCCHHHHHHHH
T ss_pred H---cCCCCCcCCCCCCCHHHHHHHc
Confidence 1 2356788999999999988754
No 89
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.05 E-value=3.7e-11 Score=113.40 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=68.7
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchh-hhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHh
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMK-AIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQ 81 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~-~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~ 81 (316)
.+|..|+||||+|+++|+.+++++|++ .+ . .+|.+|.+|+||||+|+..|+.+++++|
T Consensus 274 ~~d~~g~t~Lh~A~~~g~~~~v~~Ll~--~~~~----~~n~~d~~g~TpL~~A~~~g~~~iv~~L--------------- 332 (373)
T 2fo1_E 274 SEKYKGRTALHYAAQVSNMPIVKYLVG--EKGS----NKDKQDEDGKTPIMLAAQEGRIEVVMYL--------------- 332 (373)
T ss_dssp SSSCCCCCTHHHHHSSCCHHHHHHHHH--HSCC----CTTCCCTTCCCHHHHHHHHTCHHHHHHH---------------
T ss_pred cccccCCCHHHHHHHhCCHHHHHHHHH--hcCC----CccCcCCCCCCHHHHHHHcCCHHHHHHH---------------
Confidence 367799999999999999999999998 54 3 3799999999999999999997766554
Q ss_pred HHHHhccchhhhhhccCCCCccccccch
Q 021201 82 AVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 82 ~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
++ .+.+++.+|.+|+||++++...
T Consensus 333 -l~---~gad~~~~d~~g~t~l~~A~~~ 356 (373)
T 2fo1_E 333 -IQ---QGASVEAVDATDHTARQLAQAN 356 (373)
T ss_dssp -HH---TTCCSSCCCSSSCCHHHHHHHT
T ss_pred -HH---cCCCccCCCCCCCCHHHHHHHc
Confidence 11 2457788999999999998765
No 90
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.02 E-value=7.6e-11 Score=112.69 Aligned_cols=101 Identities=15% Similarity=0.128 Sum_probs=62.9
Q ss_pred ccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------
Q 021201 2 WKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG----------- 68 (316)
Q Consensus 2 ~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g----------- 68 (316)
+..|++|+||||+|+.+|+.+++++|++ .+.. +|..|.+|+||||+|+..|+.++++.| .|
T Consensus 8 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~--~g~~----~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~ 81 (437)
T 1n11_A 8 GGGGESGLTPLHVASFMGHLPIVKNLLQ--RGAS----PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ 81 (437)
T ss_dssp -------CCHHHHHHHHTCHHHHHHHHH--TTCC----SCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHH--cCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 4567778888888888888888888887 5543 577777888888888888877766654 12
Q ss_pred chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 69 SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 69 aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
.+++.....+..+.++.++. +.+++.+|.+|.||++++..
T Consensus 82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~ 122 (437)
T 1n11_A 82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAR 122 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Confidence 34444444455555555553 34566677777777776644
No 91
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.00 E-value=1.2e-10 Score=104.51 Aligned_cols=89 Identities=24% Similarity=0.267 Sum_probs=62.3
Q ss_pred CCCCcHHhHHHHCCCHHHHHHHhhcc-hhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHH
Q 021201 6 ENRYTIFHIAVSNRQVELFKFIDADD-MKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVK 84 (316)
Q Consensus 6 ~~G~T~LH~Av~~~~~~iv~~Ll~~~-~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~ 84 (316)
..|+||||+|+++|+.+++++|++.+ .+. .+|.+|.+|+||||+|+..++...-.. .. ..+.++
T Consensus 146 ~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga----d~~~~d~~g~tpLh~A~~~~~~~~~~~------~~-----~~~~v~ 210 (273)
T 2pnn_A 146 YFGELPLSLAACTNQLAIVKFLLQNSWQPA----DISARDSVGNTVLHALVEVADNTVDNT------KF-----VTSMYN 210 (273)
T ss_dssp CSCBSHHHHHHHTTCHHHHHHHHHCSSCCC----CTTCCCTTSCCHHHHHHHHCCSCHHHH------HH-----HHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhcccCCC----CceeeCCCCCcHHHHHHHccCcchhHH------HH-----HHHHHH
Confidence 47999999999999999999999922 222 268999999999999999887421100 00 011122
Q ss_pred Hhcc-chhh-------hhhccCCCCccccccch
Q 021201 85 KVVP-RKLA-------EAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 85 ~lv~-~~~~-------~~~N~~G~Tp~~l~~~~ 109 (316)
.++. +.++ +.+|.+|+||++++.+.
T Consensus 211 ~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 211 EILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 2222 2333 45899999999998765
No 92
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.99 E-value=2.1e-10 Score=102.01 Aligned_cols=99 Identities=19% Similarity=0.146 Sum_probs=72.8
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chH
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SAL 71 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal 71 (316)
|..|+||||+|+++|+.+++++|++ .+.. ++.+|.+|+||||+|+..|+.++++.+ .| .++
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 109 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLR--HGAD----PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAF 109 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHH--cCCC----CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHH
Confidence 6779999999999999999999999 6653 688999999999999999998877665 22 344
Q ss_pred HhHHHhhhHhHHHHhccc-hhhhhh----------ccCCCCccccccch
Q 021201 72 QMQRELLWFQAVKKVVPR-KLAEAK----------NKKGLTPRALFSEQ 109 (316)
Q Consensus 72 ~~~~el~w~~~v~~lv~~-~~~~~~----------N~~G~Tp~~l~~~~ 109 (316)
+.....+..+.++.++.. ...+.+ +.+|.||++.+...
T Consensus 110 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~ 158 (285)
T 1wdy_A 110 MEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHc
Confidence 444444455555555432 233333 78899999887654
No 93
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=98.99 E-value=1.3e-10 Score=103.25 Aligned_cols=101 Identities=20% Similarity=0.164 Sum_probs=75.1
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcch-hhhhhhhcccCCCCCChHHHHHhhhCCC----Cccccc--cC-------
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDM-KAIADLLVDSTDGEGNNILHLAGKLAPP----DRLNVV--SG------- 68 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~-~~~~~~lin~~D~~GnTpLHlAa~~~~~----~~v~~L--~g------- 68 (316)
..|..|+||||+|+++|+.+++++|++ . +.. +|.+|.+|+||||+|+..++. ++++.+ .|
T Consensus 143 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~ 216 (285)
T 1wdy_A 143 RLRKGGATALMDAAEKGHVEVLKILLD--EMGAD----VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRG 216 (285)
T ss_dssp HTTCCCCCHHHHHHHHTCHHHHHHHHH--TSCCC----TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCC
T ss_pred hhccCCCcHHHHHHHcCCHHHHHHHHH--hcCCC----CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcC
Confidence 357889999999999999999999998 5 443 688999999999999998883 333333 11
Q ss_pred ----chHHhHHHhhhHhHHHHhcc--chhhhhhccCCCCccccccch
Q 021201 69 ----SALQMQRELLWFQAVKKVVP--RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 ----aal~~~~el~w~~~v~~lv~--~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++...+.+..+.++.++. +.+++.+|.+|+||++++.+.
T Consensus 217 ~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~ 263 (285)
T 1wdy_A 217 ERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL 263 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHc
Confidence 34555555555666666664 467888899999999987654
No 94
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=98.98 E-value=6.7e-11 Score=104.59 Aligned_cols=80 Identities=15% Similarity=0.062 Sum_probs=63.8
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHHH
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAVK 84 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v~ 84 (316)
+..|.|+||.|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..|+.++++.| ++
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~--~g~~----~~~~d~~g~t~L~~A~~~g~~~~v~~L----------------l~ 91 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIY--EVDD----PSLPNDEGITALHNAVCAGHTEIVKFL----------------VQ 91 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTS--TTSS----CCCCCTTSCCHHHHHHHHTCHHHHHHH----------------HH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH----------------HH
Confidence 4568999999999999999999999 6653 689999999999999999987665544 11
Q ss_pred HhccchhhhhhccCCCCccccccch
Q 021201 85 KVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 85 ~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+.+++.+|.+|.||++++...
T Consensus 92 ---~ga~~~~~d~~g~tpL~~A~~~ 113 (239)
T 1ycs_B 92 ---FGVNVNAADSDGWTPLHCAASC 113 (239)
T ss_dssp ---HTCCTTCCCTTCCCHHHHHHHT
T ss_pred ---cCCCCCccCCCCCCHHHHHHHc
Confidence 1456788999999999998654
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=98.97 E-value=1.7e-10 Score=92.62 Aligned_cols=60 Identities=22% Similarity=0.249 Sum_probs=54.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|..|+||||+|+++|+.+++++|++ .+.+ ++.+|.+|+||||+|+..++.++++.|
T Consensus 36 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L 95 (137)
T 3c5r_A 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQ--HKAL----VNTTGYQNDSPLHDAAKNGHVDIVKLL 95 (137)
T ss_dssp SCCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCGGGCCHHHHHHHTTCHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHH--cCCc----ccCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 35678999999999999999999999999 7654 689999999999999999998887766
No 96
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=98.97 E-value=8.8e-11 Score=103.72 Aligned_cols=60 Identities=22% Similarity=0.190 Sum_probs=53.6
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 47 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~--~ga~----~n~~d~~g~tpLh~A~~~g~~~~v~~L 106 (229)
T 2vge_A 47 PSQPNEEGITALHNAICGANYSIVDFLIT--AGAN----VNSPDSHGWTPLHCAASCNDTVICMAL 106 (229)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 45678999999999999999999999999 7654 789999999999999999998887766
No 97
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.97 E-value=5.3e-10 Score=96.91 Aligned_cols=101 Identities=18% Similarity=0.132 Sum_probs=55.5
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCC-CCccccc--cC-----------
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAP-PDRLNVV--SG----------- 68 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~-~~~v~~L--~g----------- 68 (316)
.+|..|+||||+|+.+|+.+++++|++ .+.. ++.+|.+|+||||+|+..++ .+.++++ .|
T Consensus 104 ~~~~~g~t~l~~A~~~~~~~~~~~Ll~--~~~~----~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g 177 (240)
T 3eu9_A 104 LIDGEGCSCIHLAAQFGHTSIVAYLIA--KGQD----VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHK 177 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTC
T ss_pred ccCCCCCCHHHHHHHcCHHHHHHHHHh--cCCC----ccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCC
Confidence 345566666666666666666666666 4432 45666666677776665554 3333322 11
Q ss_pred -chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 -SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 -aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+++.+|.+|+||++++.+.
T Consensus 178 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 178 NTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQR 220 (240)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 23444433344444444443 345566666777777766543
No 98
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=98.95 E-value=2.8e-10 Score=103.59 Aligned_cols=60 Identities=18% Similarity=0.204 Sum_probs=53.7
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~--~gad----~~~~d~~g~tpL~~A~~~~~~~~v~~L 257 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLR--GKAS----IEIANESGETPLDIAKRLKHEHCEELL 257 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCCccCCCCCHHHHHHHcCCHHHHHHH
Confidence 46789999999999999999999999999 7764 799999999999999999997766554
No 99
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=98.95 E-value=1.3e-10 Score=109.54 Aligned_cols=83 Identities=16% Similarity=0.123 Sum_probs=69.3
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ ++.+|.+|.||||+|+..|+.++++.|
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~--~ga~----~~~~~~~g~t~L~~A~~~g~~~~v~~L-------------- 218 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMK--AGAD----PTIYNKSERSALHQAAANRDFGMMVYM-------------- 218 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----SCCCCTTCCCHHHHHHHTTCHHHHHHH--------------
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHH--CCCC----CcccCCCCCCHHHHHHHCCCHHHHHHH--------------
Confidence 46789999999999999999999999999 7764 689999999999999999986665443
Q ss_pred hHHHHhccc----hhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVPR----KLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~~----~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+.. .+++.+|.+|.||++++...
T Consensus 219 ------l~~~~~~~~~~~~d~~g~t~L~~A~~~ 245 (373)
T 2fo1_E 219 ------LNSTKLKGDIEELDRNGMTALMIVAHN 245 (373)
T ss_dssp ------TTSHHHHHTTSCCCTTSCCHHHHHHHS
T ss_pred ------HhcCccccChhhcCCCCCCHHHHHHHh
Confidence 221 46778899999999987654
No 100
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=98.94 E-value=2.6e-10 Score=91.69 Aligned_cols=59 Identities=12% Similarity=0.002 Sum_probs=47.9
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCC-CChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGE-GNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~-GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|..|+||||+|+. ++.+++++|++ .+.+ +|.+|.+ |+||||+|+..++.++++.|
T Consensus 38 ~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~--~g~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~L 97 (136)
T 1d9s_A 38 PNALNRFGRRPIQVMMM-GSAQVAELLLL--HGAE----PNCADPATLTRPVHDAAREGFLDTLVVL 97 (136)
T ss_dssp TTCCCTTCCTTTTTSTT-SCHHHHHHHHH--HTCC----SSCCBTTTTBCHHHHHHHHTCHHHHHHH
T ss_pred cCCcCCCCCCHHHHHHc-CCHHHHHHHHH--CCCC----CCCcCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 35678888889999888 88888888888 6653 6888888 88899988888888777665
No 101
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.94 E-value=5.2e-10 Score=103.28 Aligned_cols=61 Identities=18% Similarity=0.081 Sum_probs=38.3
Q ss_pred ccccC-CCCcHHhHHHHCCCHHHHHHHhhcchhhhh-----------------------------hhhcccCCCCCChHH
Q 021201 2 WKCDE-NRYTIFHIAVSNRQVELFKFIDADDMKAIA-----------------------------DLLVDSTDGEGNNIL 51 (316)
Q Consensus 2 ~~~D~-~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~-----------------------------~~lin~~D~~GnTpL 51 (316)
+.+|. .|+||||+|+++|+.+++++|++ +++.. ...+|.+|.+|.|||
T Consensus 52 n~~~~~~g~TpLh~A~~~g~~~iv~~Ll~--~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l 129 (337)
T 4g8k_A 52 NFQEEEGGWTPLHNAVQMSREDIVELLLR--HGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAF 129 (337)
T ss_dssp TCCCTTTCCCHHHHHHHTTCHHHHHHHHH--TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHH
T ss_pred CccCCCCCcCHHHHHHHcCCHHHHHHHHH--cCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHH
Confidence 34444 37788888888888888888877 33210 012456677777777
Q ss_pred HHHhhhCCCCccc
Q 021201 52 HLAGKLAPPDRLN 64 (316)
Q Consensus 52 HlAa~~~~~~~v~ 64 (316)
|+|+..++.+.++
T Consensus 130 ~~A~~~~~~~~~~ 142 (337)
T 4g8k_A 130 MEAAVYGKVKALK 142 (337)
T ss_dssp HHHHHTTCHHHHH
T ss_pred HHHHHcCcHHHHH
Confidence 7777776655543
No 102
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=98.93 E-value=2.5e-10 Score=95.14 Aligned_cols=98 Identities=19% Similarity=0.187 Sum_probs=68.0
Q ss_pred cCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC-----------chH
Q 021201 5 DENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG-----------SAL 71 (316)
Q Consensus 5 D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g-----------aal 71 (316)
...+.++||.|+++|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.+ .| .++
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 84 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMA--NGAD----VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPL 84 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHH--CCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 4567899999999999999999999 7653 689999999999999999998776654 12 233
Q ss_pred HhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccc
Q 021201 72 QMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSE 108 (316)
Q Consensus 72 ~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~ 108 (316)
+.....+..+.++.++. +.+++.+|.+|.||++++..
T Consensus 85 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 122 (169)
T 2y1l_E 85 RLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122 (169)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 33333333444444442 34556666666666666543
No 103
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=98.92 E-value=2.4e-10 Score=106.66 Aligned_cols=70 Identities=16% Similarity=0.109 Sum_probs=52.1
Q ss_pred cccCCCCCChHHHHHhhhC--CCCccccc--cC-----------chHHhHHHhhhHhHHHHhcc-chh-----hhhhccC
Q 021201 40 VDSTDGEGNNILHLAGKLA--PPDRLNVV--SG-----------SALQMQRELLWFQAVKKVVP-RKL-----AEAKNKK 98 (316)
Q Consensus 40 in~~D~~GnTpLHlAa~~~--~~~~v~~L--~g-----------aal~~~~el~w~~~v~~lv~-~~~-----~~~~N~~ 98 (316)
.+.+|.+|.||||+|+..| +.++++.| .| .+++.....+..+.++.++. ..+ ++.+|.+
T Consensus 131 ~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~ 210 (364)
T 3ljn_A 131 SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210 (364)
T ss_dssp TEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT
T ss_pred cccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC
Confidence 5789999999999999999 87877765 22 34555555556666766653 233 7889999
Q ss_pred CCCccccccch
Q 021201 99 GLTPRALFSEQ 109 (316)
Q Consensus 99 G~Tp~~l~~~~ 109 (316)
|.||++++...
T Consensus 211 g~t~L~~A~~~ 221 (364)
T 3ljn_A 211 GNSHLHWAILI 221 (364)
T ss_dssp CCCTTHHHHTT
T ss_pred CCcHHHHHHHc
Confidence 99999987654
No 104
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=98.91 E-value=5.5e-10 Score=92.31 Aligned_cols=60 Identities=18% Similarity=0.109 Sum_probs=54.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.|
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 68 VHAKDKGGLVPLHNACSYGHYEVAELLVK--HGAV----VNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCccCCCCCCHHHHHHHcCcHHHHHHHHh--CCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 45688999999999999999999999999 7654 689999999999999999998888766
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=98.91 E-value=4.7e-10 Score=106.56 Aligned_cols=87 Identities=17% Similarity=0.099 Sum_probs=54.4
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhH
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWF 80 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~ 80 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+++++|.
T Consensus 261 vn~~d~~G~TpLh~A~~~g~~~~v~~LL~--~Gad----~~~~d~~G~TpL~~A~~~g~~~iv~lLl------------- 321 (368)
T 3jue_A 261 VNQADSAGRGPLHHATILGHTGLACLFLK--RGAD----LGARDSEGRDPLTIAMETANADIVTLLR------------- 321 (368)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHH-------------
T ss_pred CCCCCCCCCCHHHHHHHcCcHHHHHHHHH--CcCC----CCCcCCCCCCHHHHHHHCCCHHHHHHHH-------------
Confidence 46789999999999999999999999999 7764 6899999999999999999987766551
Q ss_pred hHHHHhccchhhhhhccCCCCccccccch
Q 021201 81 QAVKKVVPRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 81 ~~v~~lv~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
+...........+.++.|+++++...
T Consensus 322 ---~~~~~~~~~~~~~~~~~t~l~i~~~~ 347 (368)
T 3jue_A 322 ---LAKMREAEAAQGQAGDETYLDIFRDF 347 (368)
T ss_dssp ---HHHC----------------------
T ss_pred ---HcCCCcccccccCCCCCCHHHHHHHH
Confidence 10111223345667788999887654
No 106
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=98.91 E-value=2.3e-10 Score=105.68 Aligned_cols=97 Identities=16% Similarity=0.087 Sum_probs=71.0
Q ss_pred CCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCC-CCChHHHHHhhhCCCCccccc--cCchHH-----------
Q 021201 7 NRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDG-EGNNILHLAGKLAPPDRLNVV--SGSALQ----------- 72 (316)
Q Consensus 7 ~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~-~GnTpLHlAa~~~~~~~v~~L--~gaal~----------- 72 (316)
+|.|+||.||++|+.++|++|++ .+++ +|.+|. .|.||||+|+..|+.+++++| .|+..+
T Consensus 24 ~~~t~L~~Av~~g~~~~V~~LL~--~Gad----vn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~ 97 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVDLVQQLLE--GGAN----VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFI 97 (337)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH--HTCC----TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCChHHHHHHHcCCHHHHHHHHH--CCCC----CCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhH
Confidence 47899999999999999999999 7764 688876 599999999999999988876 343221
Q ss_pred hHHHhhhHhHHHHhc-cchhhhhhccCCCCccccccch
Q 021201 73 MQRELLWFQAVKKVV-PRKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 73 ~~~el~w~~~v~~lv-~~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
..........++.+. ...+++.+|.+|.||++.+...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~ 135 (337)
T 4g8k_A 98 LAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 135 (337)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT
T ss_pred HHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHc
Confidence 111112222222222 3456788999999999987654
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=98.88 E-value=1.1e-10 Score=103.84 Aligned_cols=80 Identities=14% Similarity=0.157 Sum_probs=64.8
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccccCchHHhHHHhhhHhHH
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVVSGSALQMQRELLWFQAV 83 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L~gaal~~~~el~w~~~v 83 (316)
.|.+|+||||+|+++|+.+++++|++ .. .+|.+|.+|+||||+|+..|+.+++++| +
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~-----~~~~~d~~g~t~L~~A~~~g~~~~v~~L----------------l 97 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE--DR-----DVDAVDENGRTALLFVAGLGSDKCVRLL----------------A 97 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT--TC-----CTTCBCTTSCBHHHHHHHHTCHHHHHHH----------------H
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc--CC-----CCCCcCCCCCCHHHHHHHCCCHHHHHHH----------------H
Confidence 35679999999999999999999998 22 2689999999999999999997765544 1
Q ss_pred HHhccchhhhhhc-cCCCCccccccch
Q 021201 84 KKVVPRKLAEAKN-KKGLTPRALFSEQ 109 (316)
Q Consensus 84 ~~lv~~~~~~~~N-~~G~Tp~~l~~~~ 109 (316)
+ .+.+++.+| .+|.||++++...
T Consensus 98 ~---~ga~~~~~~~~~g~t~L~~A~~~ 121 (244)
T 3ui2_A 98 E---AGADLDHRDMRGGLTALHMAAGY 121 (244)
T ss_dssp H---TTCCTTCCCSSSCCCHHHHHHHT
T ss_pred H---cCCCCCcCCCCCCCCHHHHHHHc
Confidence 1 245677777 7899999988754
No 108
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=98.88 E-value=7.4e-10 Score=96.03 Aligned_cols=103 Identities=16% Similarity=0.036 Sum_probs=76.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cC----------
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SG---------- 68 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~g---------- 68 (316)
++..|+.|.|+||.|+++|+.+++++|++ .+.. ++.+|.+|+||||+|+..|+.++++.+ .|
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~--~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~ 75 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVE--AGYD----VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDL 75 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHH--cCCC----cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCc
Confidence 35678899999999999999999999999 6643 688999999999999999988777655 11
Q ss_pred --chHHhHHHhhhHhHHHHhcc-chhhhhhccCCCCccccccch
Q 021201 69 --SALQMQRELLWFQAVKKVVP-RKLAEAKNKKGLTPRALFSEQ 109 (316)
Q Consensus 69 --aal~~~~el~w~~~v~~lv~-~~~~~~~N~~G~Tp~~l~~~~ 109 (316)
.+++.....+..+.++.++. +.+.+.+|.+|.||++.+...
T Consensus 76 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 119 (240)
T 3eu9_A 76 NSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQF 119 (240)
T ss_dssp TBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 23444444445555655553 356677788888888876554
No 109
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=98.87 E-value=9.9e-10 Score=92.22 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=54.0
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+.+ +|.+|.+|+||||+|+..++.++++.|
T Consensus 65 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~--~g~~----~~~~d~~g~t~L~~A~~~~~~~~v~~L 124 (179)
T 3f6q_A 65 INVMNRGDDTPLHLAASHGHRDIVQKLLQ--YKAD----INAVNEHGNVPLHYACFWGQDQVAEDL 124 (179)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHH--TTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHH--cCCC----CCccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 35678999999999999999999999999 7654 789999999999999999998887766
No 110
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=98.82 E-value=4.4e-09 Score=88.84 Aligned_cols=56 Identities=20% Similarity=0.211 Sum_probs=49.0
Q ss_pred cccc-CCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCcc
Q 021201 2 WKCD-ENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRL 63 (316)
Q Consensus 2 ~~~D-~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v 63 (316)
+.+| .+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..++.+..
T Consensus 103 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~--~ga~----~~~~d~~g~tpl~~A~~~~~~~~~ 159 (183)
T 3deo_A 103 DHRDMRGGLTALHMAAGYVRPEVVEALVE--LGAD----IEVEDERGLTALELAREILKTTPK 159 (183)
T ss_dssp TCCCSSSSCCHHHHHHHTTCHHHHHHHHH--HTCC----TTCCCTTSCCHHHHHHHHHHTCCC
T ss_pred CcCCCCCCCCHHHHHHhcCcHHHHHHHHH--cCCC----CcCCCCCCCCHHHHHHHhccCccc
Confidence 4566 789999999999999999999999 7764 689999999999999998776544
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=98.81 E-value=1.1e-09 Score=107.47 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=55.2
Q ss_pred CccccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 1 MWKCDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
++.+|.+|+||||+|+.+|+.+++++|++ .+++ +|.+|.+|+||||+|+..|+.+++++|
T Consensus 200 vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~--~ga~----~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 200 LDAKAADGNTALHYAALYNQPDCLKLLLK--GRAL----VGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp TTCCCSSSCCHHHHHTTTTCHHHHHHHHH--TCCC----CSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHH--cCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 56789999999999999999999999999 7764 799999999999999999998887776
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.65 E-value=9.3e-10 Score=104.76 Aligned_cols=103 Identities=10% Similarity=0.061 Sum_probs=72.3
Q ss_pred ccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhhhhcccCCCCCChHHHHHhhhCCCCccccc--cCc------------
Q 021201 4 CDENRYTIFHIAVSNRQVELFKFIDADDMKAIADLLVDSTDGEGNNILHLAGKLAPPDRLNVV--SGS------------ 69 (316)
Q Consensus 4 ~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~~lin~~D~~GnTpLHlAa~~~~~~~v~~L--~ga------------ 69 (316)
.+.+++||||+|+++|+.+++++|++ .+.... ..+..|.+|+||||+|+..|+.++++.| .|+
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~--~ga~~~-~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~ 164 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCL--LLTSDE-IVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENY 164 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTT--C--CCS-SCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHH
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHH--cCCcHH-HHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCC
Confidence 45677899999999999999999998 554211 1234566788999999999999988877 453
Q ss_pred -hHHhHHHhhhHhHHHHhcc-chhhhh--hccCCCCcccccc-ch
Q 021201 70 -ALQMQRELLWFQAVKKVVP-RKLAEA--KNKKGLTPRALFS-EQ 109 (316)
Q Consensus 70 -al~~~~el~w~~~v~~lv~-~~~~~~--~N~~G~Tp~~l~~-~~ 109 (316)
+++....-++.+.|+.++. +.+++. +|.+|.||++++. ..
T Consensus 165 TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~ 209 (376)
T 2aja_A 165 HAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGR 209 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHC
Confidence 2333344445666776664 355555 8888999999887 54
No 113
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=98.56 E-value=1.6e-08 Score=86.49 Aligned_cols=53 Identities=11% Similarity=-0.036 Sum_probs=46.7
Q ss_pred CccccCCCCcHHhHHHHCCC------HHHHHHHhhcchhhhhhhhcccCCCCCC-hHHHHHhhhCC
Q 021201 1 MWKCDENRYTIFHIAVSNRQ------VELFKFIDADDMKAIADLLVDSTDGEGN-NILHLAGKLAP 59 (316)
Q Consensus 1 i~~~D~~G~T~LH~Av~~~~------~~iv~~Ll~~~~~~~~~~lin~~D~~Gn-TpLHlAa~~~~ 59 (316)
++.+|.+|+||||+|+.+++ .+++++|++ .+++ +|.+|.+|+ ||||+|+..+.
T Consensus 68 vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~--~Gad----in~~d~~g~ttpLh~A~~~~~ 127 (186)
T 3t8k_A 68 IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLE--KGAD----ITALYKPYKIVVFKNIFNYFV 127 (186)
T ss_dssp SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHH--TTCC----SSSCBGGGTBCTTGGGGGCCS
T ss_pred CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHH--CCCC----CCccCCCcCchHHHHHHHcCC
Confidence 56789999999999999987 578999999 7765 799999999 99999999554
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=98.19 E-value=5.6e-08 Score=92.40 Aligned_cols=59 Identities=14% Similarity=0.247 Sum_probs=36.9
Q ss_pred cccCCCCcHHhHHHHCCCHHHHHHHhhcchhhhhh-hhcccCCCCCChHHHHHhhhCCCCccccc
Q 021201 3 KCDENRYTIFHIAVSNRQVELFKFIDADDMKAIAD-LLVDSTDGEGNNILHLAGKLAPPDRLNVV 66 (316)
Q Consensus 3 ~~D~~G~T~LH~Av~~~~~~iv~~Ll~~~~~~~~~-~lin~~D~~GnTpLHlAa~~~~~~~v~~L 66 (316)
..|.+|+||||+|+++|+.+++++|++ .+++.. ..++..| +||||+|+..|+.++++.|
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~--~gad~~~~~i~~~~---~TpLh~Aa~~G~~eiv~~L 182 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCE--LAPTEIMAMIQAEN---YHAFRLAAENGHLHVLNRL 182 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHH--SCTTTHHHHHSHHH---HHHHHHHHHTTCHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHh--CCCCccccccCCCC---CCHHHHHHHCCCHHHHHHH
Confidence 345567778888888888888888877 543110 0122222 7777777777777777665
No 115
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=23.09 E-value=41 Score=22.23 Aligned_cols=13 Identities=15% Similarity=0.146 Sum_probs=6.4
Q ss_pred CceeeehhhHHhH
Q 021201 237 STWIAILVIVVPS 249 (316)
Q Consensus 237 ~~~~~~~i~~~~~ 249 (316)
..|+.|.+.+++.
T Consensus 7 vp~WiIi~svl~G 19 (54)
T 2l8s_A 7 VPLWVILLSAFAG 19 (54)
T ss_dssp CCTHHHHHHHHHH
T ss_pred CchHHHHHHHHHH
Confidence 3455555555543
Done!