Your job contains 1 sequence.
>021208
MEISSIKGLPELGMEDLSFMNQWHMMNSIDEFNLLPIAAAFGENLQHSYTHPSFNNNTGI
DRPQKQLKTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQ
NYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASV
LGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARF
CDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMT
VKDLVKNLHSAFQLFA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 021208
(316 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 511 4.2e-53 2
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 528 8.3e-51 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 276 1.4e-44 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 467 2.4e-44 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 407 5.5e-38 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 353 1.3e-34 2
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 335 2.3e-30 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 332 4.9e-30 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 323 4.4e-29 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 244 1.1e-19 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 208 1.9e-14 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 208 2.3e-14 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 204 6.0e-14 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 196 1.7e-13 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 200 2.0e-13 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 194 1.1e-12 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 155 4.2e-12 2
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 149 4.3e-12 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 186 4.8e-12 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 136 1.4e-11 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 182 1.7e-11 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 111 2.8e-11 2
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 145 3.2e-11 2
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 179 6.0e-11 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 123 1.1e-10 2
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 174 1.9e-10 1
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 173 2.4e-10 1
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 115 4.3e-10 3
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 165 8.5e-10 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 166 9.6e-10 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 158 1.0e-09 2
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 164 1.1e-09 2
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 162 1.4e-09 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 164 1.7e-09 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 119 2.2e-09 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 163 2.6e-09 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 157 2.6e-09 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 158 2.8e-09 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 138 3.1e-09 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 162 4.0e-09 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 113 4.3e-09 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 159 7.6e-09 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 146 7.9e-09 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 157 8.3e-09 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 154 2.6e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 152 3.3e-08 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 147 8.0e-08 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 140 8.1e-08 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 149 8.6e-08 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 148 9.0e-08 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 149 9.8e-08 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 146 1.0e-07 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 148 1.3e-07 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 148 1.7e-07 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 143 2.0e-07 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 143 2.1e-07 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 104 2.1e-07 2
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 142 2.2e-07 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 131 3.0e-07 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 145 3.7e-07 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 107 3.7e-07 2
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 139 5.3e-07 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 136 5.5e-07 1
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 139 6.6e-07 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 135 8.4e-07 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 139 9.5e-07 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 139 1.2e-06 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 138 1.2e-06 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 128 2.1e-06 1
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 100 2.9e-06 2
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 129 3.2e-06 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 132 4.1e-06 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 131 5.0e-06 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 127 5.1e-06 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 133 5.3e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 133 6.0e-06 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 130 6.2e-06 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 127 6.4e-06 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 133 7.1e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 131 8.9e-06 1
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 130 8.9e-06 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 126 1.2e-05 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 132 1.2e-05 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 129 1.5e-05 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 119 1.6e-05 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 126 1.8e-05 1
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 122 1.8e-05 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 130 1.9e-05 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 127 1.9e-05 1
UNIPROTKB|Q6ZKI8 - symbol:OJ1119_D01.9 "BHLH transcriptio... 124 2.0e-05 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 124 2.3e-05 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 123 2.4e-05 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 126 2.9e-05 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 123 3.1e-05 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 124 3.3e-05 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 125 3.6e-05 1
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 126 4.0e-05 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 122 4.5e-05 1
UNIPROTKB|Q8H7N8 - symbol:OJ1217B09.8 "BHLH transcription... 104 5.1e-05 2
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 119 5.2e-05 1
WARNING: Descriptions of 43 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 511 (184.9 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 117/230 (50%), Positives = 159/230 (69%)
Query: 95 LKPKQET-GAGYP-SDILPSQVSFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAER 152
LKPKQE A P S P + S+ A+ AK + A S Q+HI+AER
Sbjct: 133 LKPKQELDAAAAPFSQARPVKRSYD-----AMVAADVAKAPAAAASRPASQNQEHILAER 187
Query: 153 KRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVF 212
KRREKLSQRFIALS IVPGLKKMDKASVLGDAIKY+KQLQ++VK LEE+A ++ +E+ V
Sbjct: 188 KRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRPVEAAVL 247
Query: 213 VNKTQLS---DEGDNPNGAFN--EA---LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAE 264
V K+QLS D+G + + F+ EA LPEIEAR +++VL+++HCE RKG ++E
Sbjct: 248 VKKSQLSADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLVKIHCENRKGALITALSE 307
Query: 265 IEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTVKDLVKNLHSAFQL 314
+E + LT++N++V+ F SS LD+TI+A F+++VKD+VK L+ AF+L
Sbjct: 308 VETIGLTIMNTNVLPFTSSSLDITIMATAGENFSLSVKDIVKKLNQAFKL 357
Score = 56 (24.8 bits), Expect = 4.2e-53, Sum P(2) = 4.2e-53
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 14 MEDLSFMNQWHMMNSIDEFNLLPIAAAFGE 43
M++ SF +QW ++++ IA AFG+
Sbjct: 11 MDEPSFFHQWQSDGLLEQYTEQQIAVAFGQ 40
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 143/339 (42%), Positives = 207/339 (61%)
Query: 1 MEISSIKGLPELGMEDLSFMNQWHMMNSIDEFNLLPIAAAFGENLQHSYT---HPSFNNN 57
M I S + E +E+ S + Q+HM + + E A + HS+T PS+++
Sbjct: 1 MSILSTRWFSEQEIEENSIIQQFHMNSIVGEVQ----EAQY--IFPHSFTTNNDPSYDDL 54
Query: 58 TGIDRPQKQLKTSTWNSSETGFNPNNV-------SS---INMNQMGILKPKQETGAGYPS 107
+ +P K L+T T+ S + PN+ SS ++ G + E Y +
Sbjct: 55 IEM-KPPKILET-TYISPSSHLPPNSKPHHIHRHSSSRILSFEDYGSNDMEHEYSPTYLN 112
Query: 108 DI----LPSQVSFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFI 163
I L +QV + ++ F +G KR P + N+ SN QDHIIAERKRREKL+QRF+
Sbjct: 113 SIFSPKLEAQVQ-PHQKSDEFNR-KGTKRAQPFSRNQ-SNAQDHIIAERKRREKLTQRFV 169
Query: 164 ALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGD 223
ALSA+VPGLKKMDKASVLGDA+K++K LQE+V LEEQ ++ +ES+V V K++L + +
Sbjct: 170 ALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDN 229
Query: 224 NPN------GAFNEA-LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSS 276
N + F++ LPEIE RF D+ VLI++ CEK+KG KI+AEIEKLH+ + NSS
Sbjct: 230 NQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNSS 289
Query: 277 VMTFGSSVLDVTIIAQMDVEFNMTVKDLVKNLHSAFQLF 315
V+ FG + LD+TIIA+ + +F+MT+ D+VK+L SA F
Sbjct: 290 VLNFGPT-LDITIIAKKESDFDMTLMDVVKSLRSALSNF 327
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 276 (102.2 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 79/232 (34%), Positives = 126/232 (54%)
Query: 14 MEDLSFMNQWHMMNSIDEFNLLPIAAAFGENLQHSYTHPSFNNNTGI------DRPQKQL 67
M+D SFM+ +M DE+ + + F + T+P + +G +RP KQ+
Sbjct: 1 MDDSSFMD---LMIDTDEYLIDDWESDF-PICGETNTNPGSESGSGTGFELLAERPTKQM 56
Query: 68 KTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNYVFKAS 127
KT+ N + T +P++ SS ++ P + + ++F N + K
Sbjct: 57 KTNN-NMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVE---TSLNFSNQVSMDQKVG 112
Query: 128 QGAKRISPGAGNRLSNT-QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
K G R + ++H++AERKRR+KL++R IALSA++PGLKK DKA+VL DAIK
Sbjct: 113 SKRKDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIK 172
Query: 187 YLKQLQEKVKILEEQ--ANKKTIESVVFVNKTQ--LSDEGDNPNGAFNEALP 234
+LKQLQE+VK LEE+ KK +S++ V ++Q L D+ + + + A P
Sbjct: 173 HLKQLQERVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASP 224
Score = 210 (79.0 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 42/94 (44%), Positives = 62/94 (65%)
Query: 218 LSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSV 277
LS D + F + +P IEAR D+ +LIRVHCEK KG KI++ +EK L V+NS
Sbjct: 225 LSSSSDEVS-IFKQTMPMIEARVSDRDLLIRVHCEKNKGCMIKILSSLEKFRLEVVNSFT 283
Query: 278 MTFGSSVLDVTIIAQMDVEFNMTVKDLVKNLHSA 311
+ FG+S L +TI+ +MD +F+ V+++VKN+ A
Sbjct: 284 LPFGNSTLVITILTKMDNKFSRPVEEVVKNIRVA 317
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 120/273 (43%), Positives = 166/273 (60%)
Query: 53 SFNNNTGIDRPQKQLKTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPS 112
S N + +RP K LKT+ + + F+ +N + ++TG + P+
Sbjct: 27 SCNKSLVEERPSKILKTTHISPNLHPFSSSNPPPPKHQPSSRILSFEKTGLHVMNHNSPN 86
Query: 113 QVSFGNNQNYVF----KAS---QGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIAL 165
+ ++ KA +G KR ++ SN QDHI+AERKRREKL+QRF+AL
Sbjct: 87 LIFSPKDEEIGLPEHKKAELIIRGTKRAQSLTRSQ-SNAQDHILAERKRREKLTQRFVAL 145
Query: 166 SAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLS-DEGDN 224
SA++PGLKKMDKASVLGDAIK++K LQE VK EEQ +KT+ESVV V K+ L DE
Sbjct: 146 SALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKTMESVVLVKKSSLVLDENHQ 205
Query: 225 PN------GAFNEA---LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINS 275
P+ G N + LPEIE R K VLI++ CEK+KG KI+ EIEKL L++ NS
Sbjct: 206 PSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQKGNVIKIMGEIEKLGLSITNS 265
Query: 276 SVMTFGSSVLDVTIIAQMDVEFNMTVKDLVKNL 308
+V+ FG + D++IIAQ + F+M ++D+VKNL
Sbjct: 266 NVLPFGPT-FDISIIAQKNNNFDMKIEDVVKNL 297
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 91/194 (46%), Positives = 132/194 (68%)
Query: 128 QGAKRISPGAGNRLSN-TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
+G KR + G R ++H++AERKRREKLS++FIALSA++PGLKK DK ++L DAI
Sbjct: 100 RGTKRKTCSHGTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 187 YLKQLQEKVKIL-EEQANKKTIESVVFVNKTQLS-DEGDN----PNG--AFNEALPEIEA 238
+KQLQE+++ L EE+ + +ES++ V K+++ DE N P+ F++ALPEIEA
Sbjct: 160 RMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEA 219
Query: 239 RFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFN 298
+ +LIR+ CEK KG I+ IE L + NS V+ FG S LD+T++AQMD +F+
Sbjct: 220 KISQNDILIRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDITVLAQMDKDFS 279
Query: 299 MTV-KDLVKNLHSA 311
M++ KDLV+NL A
Sbjct: 280 MSILKDLVRNLRLA 293
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 353 (129.3 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 90/247 (36%), Positives = 138/247 (55%)
Query: 55 NNNTGIDRPQKQLKTST--WNSSETGFNPNNVSSINMN-QMGILKPKQE-TGAGYPSDIL 110
N+ + D P T+ W+ TG ++ N +P E +G G ++
Sbjct: 71 NSWSSSDSPGGGAATAAAGWSPHVTGGGGRGHRPMSWNFSAASAQPTTEDSGGGGGGGVV 130
Query: 111 PSQV----SFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALS 166
P+ + + + V K G S A + QDHIIAER+RREK++QRFI LS
Sbjct: 131 PAPLQAMETTATARAAVKKGGGGGSSSSAAAPGYV---QDHIIAERRRREKINQRFIELS 187
Query: 167 AIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDNPN 226
++PGLKKMDKA++LGDA+KY+K+LQEKVK LEE+ ++V V K+ S
Sbjct: 188 TVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRPAAMV-VRKSSCSGRQSAAG 246
Query: 227 GAFNEA-LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVL 285
E +PEIE R ++SVL+RV C +G+ ++++E+E+L L + ++SVM F +S +
Sbjct: 247 DGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMPFPASTV 306
Query: 286 DVTIIAQ 292
+TI A+
Sbjct: 307 IITITAK 313
Score = 38 (18.4 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 14 MEDLSFMNQWHM 25
M+D SF QW M
Sbjct: 1 MDDSSFFMQWAM 12
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 69/159 (43%), Positives = 110/159 (69%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ 201
+N Q+H+IAERKRREKL Q+F+AL+ IVPGLKK DK S+LG I Y+KQL+EKVK LEE
Sbjct: 283 ANAQEHVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALEEG 342
Query: 202 ANKKTIESVVFVNKTQLS---DEGDNPN-----GAFNEALPEIEARFCDKSVLIRVHCEK 253
+ + + F +K +++ D+G + + G+ + + P +EA +VL+++ C++
Sbjct: 343 SRRTAEPTTAFESKCRITVDDDDGGSASSGTDDGSSSSSSPTVEASIHGNTVLLKICCKE 402
Query: 254 RKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQ 292
R+G+ I++E+EK L++IN+SV+ F S L++TI A+
Sbjct: 403 RRGLLVMILSELEKQGLSIINTSVVPFTDSCLNITITAK 441
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 84/237 (35%), Positives = 131/237 (55%)
Query: 71 TWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNYVFKASQGA 130
+WN S P N + N + + G G LP+ VS + +S+G
Sbjct: 120 SWNFSSAMTQPCNDQATPSNPPTTTRARYG-GGGVR--YLPAAVSPSPSAQTRRASSKGN 176
Query: 131 KRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQ 190
G+ + Q+HIIAERKRREK++QRFI LS ++PGLKKMDKA++L DA++Y+K+
Sbjct: 177 GGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKE 236
Query: 191 LQEKVKILEEQANKKTIESVVFVNK----TQLSD----------EGDNPNGAFNEALPEI 236
+QEK+ LE+ N +ES + + K T SD G + +G +LPEI
Sbjct: 237 MQEKLSELEQHQNGG-VESAILLKKPCIATSSSDGGCPAASSAVAGSSSSGTARSSLPEI 295
Query: 237 EARFCDKSVLIRVHCEKR-KGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQ 292
EA+ +V++R+H E KG +++A +E LHL + +++VM F + +TI+A+
Sbjct: 296 EAKISHGNVMVRIHGENNGKGSLVRLLAAVEGLHLGITHTNVMPFSACTAIITIMAK 352
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 83/209 (39%), Positives = 129/209 (61%)
Query: 111 PSQVSFGNN---QNYVFKASQGAKRISPGA--GNRLSNTQ-DHIIAERKRREKLSQRFIA 164
PS NN ++ F A+ A + GA G + Q +H++AERKRREK++QRF+
Sbjct: 89 PSGGCGSNNLPLMSWDFSAASVAVQEDLGAHGGAAAAYAQLEHVVAERKRREKINQRFME 148
Query: 165 LSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDN 224
LSA++P LKKMDKA++L DA Y+++LQEK+K LEEQA + E+ + +
Sbjct: 149 LSAVIPKLKKMDKATILSDAASYIRELQEKLKALEEQAAARVTEAAMAT---------PS 199
Query: 225 PNGAFNE--ALPEIEARFCDKS---VLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMT 279
P A N PEIE R C + V++R+HCE +GV +I+AE+E++HL +IN++VM
Sbjct: 200 PARAMNHLPVPPEIEVR-CSPTNNVVMVRIHCENGEGVIVRILAEVEEIHLRIINANVMP 258
Query: 280 F---GSSVLDVTIIAQMDVEFN-MTVKDL 304
F G++++ +TI A+ + + + V+DL
Sbjct: 259 FLDQGATMI-ITIAAKAKINRSEVKVQDL 286
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 244 (91.0 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 77/248 (31%), Positives = 124/248 (50%)
Query: 46 QHSYTHPSFNNNTGIDRPQKQLKTSTWNSSETGFNPN---NVSSINMNQMGILKPKQETG 102
QH+ T + N+ + QK+ +T +S T +P N ++ + +P TG
Sbjct: 415 QHTPTLTAAANDAKSNN-QKRSMEATSRASNTNNHPAATANEGMLSFSSAPTTRPSTGTG 473
Query: 103 AGYPSDI----LPSQVSFGNNQNYVFKASQGAKRISPGAGNRLSNTQD----HIIAERKR 154
A S+ L + V + V + KR G + +N ++ H+ AER+R
Sbjct: 474 APAKSESDHSDLEASVREVESSRVVAPPPEAEKRPRK-RGRKPANGREEPLNHVEAERQR 532
Query: 155 REKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVN 214
REKL+QRF AL A+VP + KMDKAS+LGDAI Y+ +L+ K+ LE +K+T++S +
Sbjct: 533 REKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALE--TDKETLQSQMESL 590
Query: 215 KTQLSDEGDNPNGAFNEA-----LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLH 269
K + P+G + EIEA+ +IRV C KR +++ + +L
Sbjct: 591 KKERDARPPAPSGGGGDGGARCHAVEIEAKILGLEAMIRVQCHKRNHPAARLMTALRELD 650
Query: 270 LTVINSSV 277
L V ++SV
Sbjct: 651 LDVYHASV 658
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 55/169 (32%), Positives = 92/169 (54%)
Query: 119 NQNYVFKASQGAKRISPGAGNRLSNTQD-----HIIAERKRREKLSQRFIALSAIVPGLK 173
+Q + K R+S G G+R + TQ+ H+I+ER+RREKL++ F+ L +IVP +
Sbjct: 360 SQKLLKKVVDCGARMSTGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIH 419
Query: 174 KMDKASVLGDAIKYLKQLQEKVKILE---EQANKKTIES-----VVFVNKTQLSDEGDNP 225
K+DKAS+L + I YLK L+++VK LE E ++++ E+ K +S+ G +
Sbjct: 420 KVDKASILEETIAYLKVLEKRVKELESSSEPSHQRATETGQQRRCEITGKELVSEIGVSG 479
Query: 226 NGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVIN 274
G + DK VL+ V C ++ V ++ I+ L L V++
Sbjct: 480 GGDAGREHHHVNVTVTDKVVLLEVQCRWKELVMTRVFDAIKSLCLDVLS 528
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 208 (78.3 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 74/235 (31%), Positives = 116/235 (49%)
Query: 74 SSETGFNPNNVSSINMNQMGILKPKQET-GAGYPSDILPSQVSFGNNQNYVFKASQGAKR 132
S +T F S+ +N+ +L +T G SD+ S V + V K + R
Sbjct: 386 SGQTQFENKRKRSMVLNEDKVLSFGDKTAGESDHSDLEASVVK----EVAVEKRPKKRGR 441
Query: 133 ISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 192
P G +H+ AER+RREKL+QRF AL A+VP + KMDKAS+LGDAI Y+ +L+
Sbjct: 442 -KPANGR--EEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELK 498
Query: 193 EKV-KILEEQAN-KKTIESVVF-VNKTQLSDEGDNPNGAFNEALP---EIEARFCDKSVL 246
KV K E+ K +E V + + S G + + + + P EIE + +
Sbjct: 499 SKVVKTESEKLQIKNQLEEVKLELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAM 558
Query: 247 IRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTV 301
IRV KR ++++ + L L V ++S+ SV++ +I Q V+ +
Sbjct: 559 IRVESSKRNHPAARLMSALMDLELEVNHASM-----SVVNDLMIQQATVKMGFRI 608
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 204 (76.9 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 48/104 (46%), Positives = 71/104 (68%)
Query: 146 DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKK 205
+H+ AER+RREKL+QRF AL ++VP + KMDKAS+LGDAI Y+K+LQEKVKI+E++
Sbjct: 395 NHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDER--- 451
Query: 206 TIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRV 249
V +K+ LS+ N E PE++ + ++ V++RV
Sbjct: 452 -----VGTDKS-LSES----NTITVEESPEVDIQAMNEEVVVRV 485
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 55/194 (28%), Positives = 101/194 (52%)
Query: 131 KRISPGAGNR-LSNTQ-DHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIK 186
++ P N + N + +HI ER RR ++++ +L A++P +++ D+AS++G AI
Sbjct: 162 RKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAIN 221
Query: 187 YLKQLQEKVKILEEQAN-KKTIESVVFVNK-TQLSDEGDNPNGAFNE---ALPEIEARFC 241
Y+K L++ ++ LE Q ++ S V N LS N E +P+IEA
Sbjct: 222 YVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVI 281
Query: 242 DKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTV 301
V ++V CEK++G K + +EKL LTV++ ++ T S + + +M+ E ++
Sbjct: 282 QNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLES 341
Query: 302 KD-LVKNLHSAFQL 314
D + +H F +
Sbjct: 342 ADEITAAVHRIFDI 355
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 63/237 (26%), Positives = 114/237 (48%)
Query: 68 KTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGA-GYPSDILPSQVSFGNNQNYVFKA 126
K N E + S ++ N+ G+L SD+ S + V +
Sbjct: 337 KNGIENGQEEDSSNKKRSPVSNNEEGMLSFTSVLPCDSNHSDLEASVAKEAESNRVVVEP 396
Query: 127 SQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
+ ++ N +H+ AER+RREKL+QRF +L A+VP + KMDKAS+LGDAI
Sbjct: 397 EKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAIS 456
Query: 187 YLKQLQEKVKILEEQANKKTIESVVFV-NKTQLSDEGD-NPNGAFNEALP-----EIEAR 239
Y+ +L+ K++ + +++K+ ++ + V NK + + N+ E++ +
Sbjct: 457 YISELKSKLQ--KAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVK 514
Query: 240 FCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVE 296
+IR+ C KR K + +++L L V ++S+ SV++ +I Q V+
Sbjct: 515 IIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASL-----SVVNDLMIQQATVK 566
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 194 (73.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 66/250 (26%), Positives = 116/250 (46%)
Query: 65 KQLKTSTWNSSETGFNPNNVSSINMNQMGILKPKQET-GAGYPSDILPSQVSFGNNQNYV 123
K +T ++ +E+ +VS + N G+L A SD + S V
Sbjct: 333 KSNETLSFCGNESSKKRTSVSKGSNNDEGMLSFSTVVRSAANDSDHSDLEASVVKEAIVV 392
Query: 124 FKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGD 183
+ ++ N +H+ AER+RREKL+QRF +L A+VP + KMDKAS+LGD
Sbjct: 393 EPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGD 452
Query: 184 AIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDNPNGAFNEALP--------- 234
AI Y+ +L+ K++ + +++K+ I+ + +S EG+N G + A
Sbjct: 453 AISYINELKSKLQ--QAESDKEEIQKKL----DGMSKEGNNGKGCGSRAKERKSSNQDST 506
Query: 235 ------EIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVT 288
EI+ + V+IRV C K+ + + +++L L V ++S+ ++
Sbjct: 507 ASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKELDLEVNHASLSVVNDLMIQQA 566
Query: 289 IIAQMDVEFN 298
+ FN
Sbjct: 567 TVKMGSQFFN 576
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 155 (59.6 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 30/71 (42%), Positives = 51/71 (71%)
Query: 136 GAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKV 195
G G++ N ++AER+RR+KL+ R AL ++VP + K+D+AS+LGDAI Y+K+LQ +
Sbjct: 308 GKGSQAKN----LMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEA 363
Query: 196 KILEEQANKKT 206
K L+++ + +
Sbjct: 364 KELQDELEENS 374
Score = 78 (32.5 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 22/86 (25%), Positives = 43/86 (50%)
Query: 223 DNPNGAFNEALPEIEARFCD-KSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFG 281
+N N E P+++ D + ++V CE + G F +++ ++ L L V N++ +
Sbjct: 417 ENSNDKGQEMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYL 476
Query: 282 SSVLDVTIIAQMDVEFNMTVKDLVKN 307
S V +V + + D E M + V+N
Sbjct: 477 SLVSNVFKVEKNDNE--MVQAEHVRN 500
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 149 (57.5 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 31/82 (37%), Positives = 55/82 (67%)
Query: 134 SP-GAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ 192
SP GA +++++ +++ER RR+KL+QR AL ++VP + K+DKASV+ D+I Y+++L
Sbjct: 42 SPDGAATSPASSKN-VVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELI 100
Query: 193 EKVKILEEQANKKTIESVVFVN 214
++ K LE + + S + N
Sbjct: 101 DQEKTLEAEIRELESRSTLLEN 122
Score = 70 (29.7 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 14/67 (20%), Positives = 38/67 (56%)
Query: 242 DKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTV 301
+K+V++ + C K++ ++ +E L+L ++ ++ +F +S L T+ Q+ + + ++
Sbjct: 176 EKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF-TSRLSTTLFLQVTLSLSPSL 234
Query: 302 KDLVKNL 308
L N+
Sbjct: 235 ISLFGNV 241
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 186 (70.5 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 57/195 (29%), Positives = 93/195 (47%)
Query: 116 FGNNQNYVFKASQGAKRISPGAGNR--LSNTQD-HIIAERKRREKLSQRFIALSAIVPGL 172
FG + G + + G R L T +++AER+RR++L+ R L +IVP +
Sbjct: 149 FGGGAGESSEMMAGIRGVGGGVHPRSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKI 208
Query: 173 KKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDNPNGAF-NE 231
KMD+ S+LGD I Y+K+L E++K LEE+ T E + +N + S G+N N
Sbjct: 209 SKMDRTSILGDTIDYVKELTERIKTLEEEIGV-TPEELDLLNTMKDSSSGNNNEMLVRNS 267
Query: 232 ALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIA 291
++E R + I + C GV V+ +E L L + V F + + +
Sbjct: 268 TKFDVENRGSGNT-RIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCL- 325
Query: 292 QMDVEFNMTVKDLVK 306
Q D + + D +K
Sbjct: 326 QEDGKRQVVSTDEIK 340
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 136 (52.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/78 (37%), Positives = 52/78 (66%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKT 206
+I ER RR++L+++ AL A+VP + KMDKAS++ DAI ++++LQE+ + L ++ +
Sbjct: 98 NIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEIS--V 155
Query: 207 IESVVFVNKTQLSDEGDN 224
++S V T + D D+
Sbjct: 156 LQSAAAVAATAVEDVDDS 173
Score = 84 (34.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 234 PEIE-ARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQ 292
P+++ ++ +K+V + + C K +G K+ +E L+L V+++SV + +D TI+
Sbjct: 232 PQLQVSKVGEKTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASV-----AAVDGTIVHT 286
Query: 293 MDVE 296
M VE
Sbjct: 287 MFVE 290
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 47/124 (37%), Positives = 70/124 (56%)
Query: 97 PKQETGAGYPSDILPSQVSFGNNQNYVFKASQG-----AKRISPGA-GNRLSNTQD---- 146
PK E G+ + Q G+NQ Y ++ + P G + +N ++
Sbjct: 261 PKTEDDTGFSLESYEVQAIGGSNQVYGYEQGKDETLYLTDEQKPRKRGRKPANGREEALN 320
Query: 147 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE-EQANKK 205
H+ AER+RREKL+QRF AL A+VP + KMDKAS+L DAI Y+ +Q+K+++ E E+ K
Sbjct: 321 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRVYETEKQIMK 380
Query: 206 TIES 209
ES
Sbjct: 381 RRES 384
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 111 (44.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
HI ER RR +++ L ++ P +K+ D+AS++G AI ++K+LQ ++ LE Q +
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQKKR 62
Query: 205 KTIESVVFVNKTQLSDEG 222
+ ++ +S G
Sbjct: 63 RQQPQAHLISPASISASG 80
Score = 105 (42.0 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 23/83 (27%), Positives = 48/83 (57%)
Query: 230 NEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTI 289
N + ++EAR +VL+R + V +I+A +E LHL V++ ++ T +VL +
Sbjct: 134 NSPMADVEARISGANVLLRTLSRRAPPV--RIIALLESLHLEVLHLNITTMDDTVL-YSF 190
Query: 290 IAQMDVEFNMTVKDLVKNLHSAF 312
+ ++ ++ +++V DL +H +F
Sbjct: 191 VLKIGLDCHLSVDDLAMEVHQSF 213
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 145 (56.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 136 GAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQ-EK 194
G G+ +I+ ER RR KL+++ AL ++VP + KMDKAS++ DAI+Y+++LQ E+
Sbjct: 83 GGGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEE 142
Query: 195 VKILEEQA 202
++L E A
Sbjct: 143 QQMLREVA 150
Score = 71 (30.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 14/65 (21%), Positives = 36/65 (55%)
Query: 242 DKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTV 301
D+ +++ V C KR+ ++ +E+L L VI +++ + + T+ ++D ++ +
Sbjct: 229 DRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMH-TLFVEVDHMDSVQM 287
Query: 302 KDLVK 306
K +V+
Sbjct: 288 KQMVE 292
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 179 (68.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 32/66 (48%), Positives = 49/66 (74%)
Query: 139 NRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
N + +H+ AER+RREKL+QRF AL ++VP + KMDKAS+LGDA+ Y+ +L K+K++
Sbjct: 426 NGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVM 485
Query: 199 EEQANK 204
E + +
Sbjct: 486 EAERER 491
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 123 (48.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/68 (33%), Positives = 45/68 (66%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
HI ER RR ++++ +L ++ P +K+ D+AS++G I+++K+LQ+ V++LE + +
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 205 KTIESVVF 212
KT+ F
Sbjct: 63 KTLNRPSF 70
Score = 80 (33.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 18/83 (21%), Positives = 46/83 (55%)
Query: 230 NEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTI 289
N +EA+ +V++RV + G KI++ +EKL V++ ++ + +VL +
Sbjct: 111 NSPHANVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFV 170
Query: 290 IAQMDVEFNMTVKDLVKNLHSAF 312
+ ++ +E ++++++L + +F
Sbjct: 171 V-KIGLECHLSLEELTLEVQKSF 192
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 54/193 (27%), Positives = 91/193 (47%)
Query: 112 SQVSFGNNQNYVFKASQGAKRIS-PGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVP 170
S+ + G + K S ++ G G + +++AER+RR+KL+ R L ++VP
Sbjct: 301 SEDARGGEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVP 360
Query: 171 GLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDN----PN 226
+ KMD+AS+LGDAI+YLK+L +K+ L+ + S + T P+
Sbjct: 361 KISKMDRASILGDAIEYLKELLQKINDLQNELESSPATSSLPPTPTSFHPLTPTLPTLPS 420
Query: 227 GAFNE----ALPE-------IEARFCD-KSVLIRVHCEKRKGVFEKIVAEIEKLHLTVIN 274
E ALP +E R + ++V I + C +R G+ + +E L L V
Sbjct: 421 RIKEEICPSALPSPTGQQPRVEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQ 480
Query: 275 SSVMTFGSSVLDV 287
+ + F LD+
Sbjct: 481 AVISCFNGFTLDI 493
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 173 (66.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 47/137 (34%), Positives = 77/137 (56%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE----EQA 202
H++AER+RREKL+++FI L ++VP + KMDK S+LGD I Y+ L+++V LE EQ
Sbjct: 364 HVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELENTHHEQQ 423
Query: 203 NKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIV 262
+K+T K + S+E +E + VL+ + CE R G+ I+
Sbjct: 424 HKRTRTC-----KRKTSEE--------------VEVSIIENDVLLEMRCEYRDGLLLDIL 464
Query: 263 AEIEKLHL--TVINSSV 277
+ +L + T +++SV
Sbjct: 465 QVLHELGIETTAVHTSV 481
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 115 (45.5 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 23/85 (27%), Positives = 52/85 (61%)
Query: 125 KASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLG 182
K+ + R S + S HI ER RR+++++ L +++PG +++ D+AS++G
Sbjct: 177 KSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIG 236
Query: 183 DAIKYLKQLQEKVKILEEQANKKTI 207
AI+++++L++ ++ LE Q ++ +
Sbjct: 237 GAIEFVRELEQLLQCLESQKRRRIL 261
Score = 97 (39.2 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 24/105 (22%), Positives = 53/105 (50%)
Query: 210 VVFVNKTQLSDEGD-NPNGAFNEA-LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEK 267
++ N T+L G A N++ L ++E + +I++ +R G K +A +E
Sbjct: 290 IITGNVTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALED 349
Query: 268 LHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTVKDLVKNLHSAF 312
LHL+++++++ T +VL + ++ E T +D+ ++ F
Sbjct: 350 LHLSILHTNITTMEQTVL-YSFNVKITSETRFTAEDIASSIQQIF 393
Score = 38 (18.4 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 30 DEFNLLPIA--AAFGENLQHSYTHPSFNNNTGIDRPQKQLKTSTWN 73
D+ N + A FG L + T + TGID P LK N
Sbjct: 61 DKMNFSDVMQFADFGSKLALNQTRNQDDQETGID-PVYFLKFPVLN 105
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 165 (63.1 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 53/205 (25%), Positives = 95/205 (46%)
Query: 105 YPSDILPSQVSFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIA 164
YPS ++ S S + Y + K+ S + S +++AER+RR++L+ R
Sbjct: 142 YPSPLMESDQSKSFSVGYC--GGETNKKKSKKLEGQPSK---NLMAERRRRKRLNDRLSM 196
Query: 165 LSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGD- 223
L +IVP + KMD+ S+LGDAI Y+K+L +K+ L+++ + + +K D D
Sbjct: 197 LRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKL-FGDLKDL 255
Query: 224 NPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSS 283
N N P+ E D+ + + C + G+ V +E L L + + F
Sbjct: 256 NANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDF 315
Query: 284 VLDVTIIAQMDVEFNMTVKDLVKNL 308
L + + +T +D+ + L
Sbjct: 316 SLQASCSEGAEQRDFITSEDIKQAL 340
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 166 (63.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 54/185 (29%), Positives = 96/185 (51%)
Query: 123 VFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLG 182
+ + +G KR A R +H+ AER RREKL+ RF AL A+VP + KMDK S+L
Sbjct: 321 MLEKKKGKKRGRKPAHGR-DKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLE 379
Query: 183 DAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDN-PNGA-FNEALPE---IE 237
DA+ Y+ +L+ K + +E + K IE + F +++ + + P+ + E E IE
Sbjct: 380 DAVCYINELKSKAENVELE--KHAIE-IQFNELKEIAGQRNAIPSVCKYEEKASEMMKIE 436
Query: 238 ARFCDKS-VLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVE 296
+ + ++RV K +++ + L L V ++S+ SV++ +I Q +V+
Sbjct: 437 VKIMESDDAMVRVESRKDHHPGARLMNALMDLELEVNHASI-----SVMNDLMIQQANVK 491
Query: 297 FNMTV 301
+ +
Sbjct: 492 MGLRI 496
Score = 41 (19.5 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 40 AFGENLQHSYTHPSFNNNTGIDRPQKQLKTST 71
+FGEN++ S+ + N NT D+ Q + +T
Sbjct: 290 SFGENVKQSFENR--NPNTYSDQIQNVVPHAT 319
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 158 (60.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 47/146 (32%), Positives = 78/146 (53%)
Query: 96 KPKQETGAGYPSDILPSQVSFGNNQNYVF---KASQGAKRI--SPGAGNRLSNTQDHIIA 150
K + +G + PSQ G + +F + Q K + SP A + N H +
Sbjct: 392 KKSSSSSSGTATVTAPSQ---GMLKKIIFDVPRVHQKEKLMLDSPEARDETGN---HAVL 445
Query: 151 ERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE---EQANKKTI 207
E+KRREKL++RF+ L I+P + K+DK S+L D I+YL++L+ +V+ LE E + +T
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDTET- 504
Query: 208 ESVVFVNKTQLSDEGD--NPNGAFNE 231
+ + + + D G+ + N A NE
Sbjct: 505 RGTMTMKRKKPCDAGERTSANCANNE 530
Score = 53 (23.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 245 VLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTI 289
V+I + C R+GV +I+ I LHL +S + G +L +T+
Sbjct: 568 VVIELRCAWREGVLLEIMDVISDLHLDS-HSVQSSTGDGLLCLTV 611
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 164 (62.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/78 (39%), Positives = 53/78 (67%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQAN 203
T +H ++E+KRREKL++RF+ L +I+P + K+DK S+L D I+YL+ LQ++V+ LE
Sbjct: 403 TGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRE 462
Query: 204 KKTIESVVFVNKTQLSDE 221
E+ + + K + D+
Sbjct: 463 SADTETRITMMKRKKPDD 480
Score = 45 (20.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 245 VLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTI 289
V+I + C R+G+ +I+ I L+L +S + G +L +T+
Sbjct: 527 VVIELRCAWREGILLEIMDVISDLNLDS-HSVQSSTGDGLLCLTV 570
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 162 (62.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 56/190 (29%), Positives = 94/190 (49%)
Query: 106 PSDILPSQVSFGNNQNYVFKASQGAKRISPGAGNRL-SNTQ------DHIIAERKRREKL 158
P ILP+ S N NY + IS G N+ SN + +++AER+RR++L
Sbjct: 106 PPLILPA--SQENTNNYSPLMEESKSFISIGETNKKRSNKKLEGQPSKNLMAERRRRKRL 163
Query: 159 SQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQL 218
+ R L +IVP + KMD+ S+LGDAI Y+K+L +K+ L+E +++ + S + L
Sbjct: 164 NDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQE--DEQELGS-----NSHL 216
Query: 219 SDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVM 278
S N + N E++ R + + I + C + G+ V+ +E L L + +
Sbjct: 217 STLITNESMVRNSLKFEVDQR--EVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVIS 274
Query: 279 TFGSSVLDVT 288
F L +
Sbjct: 275 CFSDFSLQAS 284
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 57/222 (25%), Positives = 99/222 (44%)
Query: 82 NNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQ-NYVFKASQGAKRISPGAGNR 140
N V SI K +TG+ YP + GN Q K + + A +
Sbjct: 183 NRVKSI-FGSGKTTKHTNQTGS-YPKPAVSDHSKSGNQQFGSERKRRRKLETTRVAAATK 240
Query: 141 LSN---TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKI 197
+ H+ AE++RREKL+ RF AL AIVP + +MDKAS+L DA+ Y++ L+ K+
Sbjct: 241 EKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDD 300
Query: 198 LEEQANK-KTIESVVFVNKTQLSDEGD-------NPNGAFNEALPEIEARFCDKSVLIRV 249
LE + K K E+ N + + P+ + + E++ + + +IRV
Sbjct: 301 LETEIKKMKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRV 360
Query: 250 HCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGS-SVLDVTII 290
E +++ + ++ V +++ V DV ++
Sbjct: 361 QTENVNHPTSALMSALMEMDCRVQHANASRLSQVMVQDVVVL 402
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 119 (46.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 25/82 (30%), Positives = 50/82 (60%)
Query: 126 ASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGD 183
+S A + G G+ + HI ER RR+++++ L +++P +K+ D+AS++G
Sbjct: 114 SSPAALAAAVGDGDGAAK-MSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGG 172
Query: 184 AIKYLKQLQEKVKILEEQANKK 205
+ Y+K+LQ+ ++ LE + N+K
Sbjct: 173 VVDYIKELQQVLRSLEAKKNRK 194
Score = 88 (36.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 19/81 (23%), Positives = 45/81 (55%)
Query: 233 LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFG-SSVLDVTIIA 291
+P++ F +++++ + G KI+A +E L L +++ S+ T ++VL TI
Sbjct: 336 VPDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTI-- 393
Query: 292 QMDVEFNMTVKDLVKNLHSAF 312
++ +E ++ ++LV+ + F
Sbjct: 394 KIGIECELSAEELVQEIQQTF 414
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 28/63 (44%), Positives = 49/63 (77%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ 201
SN + H+++ER+RREKL++ F+ L +++P ++K+DKAS+L + I YLK L+++VK LE
Sbjct: 374 SNIKSHVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELESS 433
Query: 202 ANK 204
+ +
Sbjct: 434 SRE 436
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 157 (60.3 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 45/161 (27%), Positives = 84/161 (52%)
Query: 131 KRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQ 190
++ P +G + H+ AER+RREKL++RF L A VP + +MDKAS+L DA+ Y+ +
Sbjct: 79 RKPGPRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAE 138
Query: 191 LQEKVKILEEQANKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVL-IRV 249
L+ +V+ LE +A + + + G G ++ + + R D ++L +
Sbjct: 139 LRRRVERLEAEARRAPLAPSAAAAAAWAAGLGAGAIGR-DDLVVRMIGR--DAAILRLTT 195
Query: 250 HCEKRKGVFEKIVAEIEKLHLTVINSSVMTFG-SSVLDVTI 289
+ +++ + L+L V ++SV G ++V DV +
Sbjct: 196 AAAAARHAPARMMCAVRALNLAVQHASVARVGGATVQDVMV 236
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 158 (60.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 52/172 (30%), Positives = 81/172 (47%)
Query: 126 ASQGAKRISPGAGNRLSN-TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDA 184
A + AKR G R T H+ AER+RREKL++RF L A VP + +MDKAS+L DA
Sbjct: 90 AQRPAKRRGRKPGPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADA 149
Query: 185 IKYLKQLQEKVKILEEQANKKT---IESVVFVNKTQLSDEGDNPNGAFNEALPE-IEARF 240
Y+ +L+ +V LE A + E S G G L E +E R
Sbjct: 150 AAYIAELRARVARLESDARQAAAARFEPSSCGGGGNASYHGGGGGGGAAPGLDEAVEVRK 209
Query: 241 CDK-SVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVM-TFGSSVLDVTII 290
+ + +RV + +++ + L L V ++ VM G++ + ++
Sbjct: 210 MGRDAAAVRVTTTGARHAPARLMGALRSLELPVQHACVMRVHGATTVQEVLV 261
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 138 (53.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 150 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ 201
AERKRR+KL+ L ++VP + KMD+AS+LGDAI Y+ LQ++VK L+++
Sbjct: 289 AERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDE 340
Score = 69 (29.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 220 DEGDNPNGAFNEALPEIEARFCDKSVL-IRVHCEKRKGVFEKIVAEIEKLHLTVINSSVM 278
D+ G + P++E R + L ++V E + G F +++ + L L VIN +V
Sbjct: 402 DKVGGGGGGGHRMEPQLEVRQVQGNELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVT 461
Query: 279 TFGSSVLDVTIIAQMDVE 296
T+ + VL+V + D E
Sbjct: 462 TYKTLVLNVFRVMVRDSE 479
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 162 (62.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/179 (27%), Positives = 87/179 (48%)
Query: 125 KASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDA 184
KA++ + G G + +++AER+RR+KL+ R L ++VP + KMD+AS+LGDA
Sbjct: 286 KAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 345
Query: 185 IKYLKQLQEKVKILEEQANKK-------TIESVVFVNKT------QLSDE---GDNPNGA 228
I YLK+L +++ L + T S + T ++ +E P+
Sbjct: 346 IDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPK 405
Query: 229 FNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDV 287
+A E+ R ++V I + C +R G+ + ++ L L V + + F LDV
Sbjct: 406 GQQARVEVRLRE-GRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDV 463
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 113 (44.8 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 20/67 (29%), Positives = 44/67 (65%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
H+ ER RR+++++ L +++P +K+ D+AS++G ++Y+ +LQ+ ++ LE + +
Sbjct: 104 HVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQR 163
Query: 205 KTIESVV 211
KT V+
Sbjct: 164 KTYAEVL 170
Score = 90 (36.7 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 20/81 (24%), Positives = 44/81 (54%)
Query: 232 ALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIA 291
AL ++E +F +VL++ K G KI+A +E L L ++ ++ T ++L+ I
Sbjct: 284 ALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTI- 342
Query: 292 QMDVEFNMTVKDLVKNLHSAF 312
++ +E ++ ++L + + F
Sbjct: 343 KIGIECQLSAEELAQQIQQTF 363
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 159 (61.0 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 27/61 (44%), Positives = 48/61 (78%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ 201
S+ ++H+++ER+RREKL + F+ L ++VP + K+DKAS+L + I YLK+L+++V+ LE
Sbjct: 240 SSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESS 299
Query: 202 A 202
+
Sbjct: 300 S 300
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 146 (56.5 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 45/146 (30%), Positives = 77/146 (52%)
Query: 150 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIES 209
AER+RREKL R +AL + VP + M KAS++ DAI Y+ +LQ VK L E ++ E+
Sbjct: 36 AERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHEME-EA 94
Query: 210 VVFVNKTQLSDEGDNPN---GAFNEALPEI----EARFC---DKSVLIRVHCEKRKGVFE 259
+++ Q +D P NE + ++ + C ++ +++ EKR G+F
Sbjct: 95 PPEIDEEQ-TDPMIKPEVETSDLNEEMKKLGIEENVQLCKIGERKFWLKIITEKRDGIFT 153
Query: 260 KIVAEIEKLHLTVINSSVMTFGSSVL 285
K + + L +I+ S+ T ++L
Sbjct: 154 KFMEVMRFLGFEIIDISLTTSNGAIL 179
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 157 (60.3 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 31/75 (41%), Positives = 54/75 (72%)
Query: 131 KRISPGAG---NRLSNT---QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDA 184
K++ G G NR + + ++H+++ER+RREKL++ F+ L ++VP + K+DKAS+L +
Sbjct: 167 KKVVGGGGAWMNRAAGSCSIKNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSET 226
Query: 185 IKYLKQLQEKVKILE 199
I YLK+L+ +V+ LE
Sbjct: 227 IAYLKELERRVQELE 241
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 35/84 (41%), Positives = 49/84 (58%)
Query: 118 NNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDK 177
N Q Y +A+ A S N H+I+ERKRREKL+ F+AL A++P K DK
Sbjct: 226 NRQYYYQQAAAAAASASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDK 285
Query: 178 ASVLGDAIKYLKQLQEKVKILEEQ 201
S+L A +Y+K L+ K+ LEE+
Sbjct: 286 TSILIRAREYVKSLESKLSELEEK 309
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 152 (58.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 53/216 (24%), Positives = 98/216 (45%)
Query: 96 KPKQETGAGYPSDILPSQVSFGNNQNYVFKAS-QGAKRISPGAGNRLSNTQDHIIAERKR 154
K ++ G G S L FG + + PGA ++ +++AER+R
Sbjct: 151 KARRGAGGGGDSGELAPMFVFGGGGGAAASVRPRSCRPPQPGAPSK------NLMAERRR 204
Query: 155 REKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQA--NKKTIESVVF 212
R++L+ R L ++VP + KMD+ S+LGD I Y+K+L +++K L+ +A + S
Sbjct: 205 RKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAATGDSSSSSTEN 264
Query: 213 VNKTQLSDEGDNPNGAFNEALP--------EIEARFCDKSVLIRVHCEKRKGVFEKIVAE 264
++ +L+ P+ + E P E+E R + S I + C + +A
Sbjct: 265 LSMLKLNTLKPPPSSSSGEETPLIRNSTRFEVERRE-NGSTRIEMACAAIPELLPSTLAA 323
Query: 265 IEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMT 300
+E L + + + F + + + Q D + MT
Sbjct: 324 LEALGVEIEQCVISCFDDFAMQASCL-QDDKKREMT 358
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 147 (56.8 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 138 GNRLSNTQDH--IIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKV 195
G R + T +I+ER+RR ++ + AL ++VP + KMDKAS++GDA+ Y+++LQ +
Sbjct: 121 GTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQA 180
Query: 196 KILEE-----QANKKTI----ESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVL 246
K L+ +A+ + E KTQ G NP A + + + +K
Sbjct: 181 KKLKSDIAGLEASLNSTGGYQEHAPDAQKTQ-PFRGINPP-ASKKIIQMDVIQVEEKGFY 238
Query: 247 IRVHCEKRKGVFEKIVAEIEKL-HLTVINSSV 277
+R+ C K +GV + +E L V NS++
Sbjct: 239 VRLVCNKGEGVAPSLYKSLESLTSFQVQNSNL 270
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 140 (54.3 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 34/86 (39%), Positives = 54/86 (62%)
Query: 114 VSFGNNQNYVFKASQ-GAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGL 172
VS Y F+ + GAK+ + + R + Q H ++E+KRR K++++ AL ++P
Sbjct: 66 VSETGQDKYAFEHKRSGAKQRN--SLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNS 123
Query: 173 KKMDKASVLGDAIKYLKQLQEKVKIL 198
K DKAS+L +AI+YLKQLQ +V+ L
Sbjct: 124 NKTDKASMLDEAIEYLKQLQLQVQTL 149
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 149 (57.5 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 35/104 (33%), Positives = 60/104 (57%)
Query: 120 QNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKAS 179
+ Y ++ + A N H+I+ERKRREKL+ F+AL A++P K DKAS
Sbjct: 158 RQYYYQQAAAAAAAEAAPAPPSDNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKAS 217
Query: 180 VLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGD 223
+L A +++K L+ K+ LEE+ N++ +E+ + +D+G+
Sbjct: 218 ILIRAREHIKSLESKLSELEEK-NRE-LEARLASRPAAKNDKGE 259
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 148 (57.2 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 41/174 (23%), Positives = 90/174 (51%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILE 199
S HI ER RR +++ +L +I+P +++ D+AS++G AI ++K L+++++ LE
Sbjct: 190 SQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLE 249
Query: 200 EQANKKTIESVVFVNKTQLSDEGDNPNGAFNEALP----------EIEARFCDKSVLIRV 249
Q + + NK Q+ ++ N + N+ +IEA + V +++
Sbjct: 250 AQKRSQQSDD----NKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKI 305
Query: 250 HCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTVKD 303
C +++G + + +EKL TV++ ++ + ++ + + +M+ E N+ D
Sbjct: 306 QCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSAD 359
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 149 (57.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 45/181 (24%), Positives = 96/181 (53%)
Query: 127 SQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
S+ K++ P + N H +ERKRRE+++Q L A+VP + K++K + DA+
Sbjct: 249 SKANKKLLPTENFKSKNL--H--SERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVD 304
Query: 187 YLKQLQ-EKVKILEEQA--NKKTIESVVFVNKTQLSD-EGDNPNGAFNEALPEIEARF-- 240
Y+ +L EK K+ +E N+ + + ++ ++D E + + N+ + + E +
Sbjct: 305 YINELLVEKQKLEDELKGINEMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEV 364
Query: 241 ---CDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEF 297
++ LIRV E ++ F++++ ++ L +I+ + F + LD+T++ ++V+
Sbjct: 365 HETGERDFLIRVVQEHKQDGFKRLIEAVDLCELEIID---VNF--TRLDLTVMTVLNVKA 419
Query: 298 N 298
N
Sbjct: 420 N 420
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 146 (56.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 31/75 (41%), Positives = 54/75 (72%)
Query: 125 KASQGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGD 183
+A+ GA R G+G++ S + H ++E++RR K++++ AL +++P K DKAS+L +
Sbjct: 86 EAAAGA-RPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDE 144
Query: 184 AIKYLKQLQEKVKIL 198
AI+YLKQLQ +V++L
Sbjct: 145 AIEYLKQLQLQVQML 159
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/135 (24%), Positives = 73/135 (54%)
Query: 64 QKQLKTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNYV 123
+++L TS+ SS + NN +++ + I + ++ + S + + +
Sbjct: 181 EERLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRKHVMDADQESVSQSDIGLTSTDDQT 240
Query: 124 FKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGD 183
++ ++R G+ R + H ++ER+RR+++++R AL ++P + DKAS+L +
Sbjct: 241 M-GNKSSQR--SGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDE 297
Query: 184 AIKYLKQLQEKVKIL 198
AI YLK LQ +++++
Sbjct: 298 AIDYLKSLQMQLQVM 312
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 148 (57.2 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 62/207 (29%), Positives = 93/207 (44%)
Query: 21 NQWHMMNSIDEFNLLPIAAAFGENLQHSYTHPSFNNNTGIDRPQKQLKTSTWNSSETGFN 80
+Q H +N +FN + + F QH PS ++ ID QK+ + + + +
Sbjct: 206 SQPHHLNDDIDFNTGKLMS-FASGQQH--VTPSIDS-LQID--QKEFSSGLHHLNLSSLI 259
Query: 81 PNNVSSINMNQMGILKPKQ----ETGAGYPSDILPSQVSFGNNQNYVFKASQGAKRISPG 136
++S N Q +P + + G P L + GN A GA +
Sbjct: 260 SGPLASFNATQSH-RQPAEACGGKNGGAAPFVNLSEVLPKGNGSG---SAGNGAPKPRVR 315
Query: 137 AGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVK 196
A R T H IAER RREK+S R L +VP K +KAS+L + I Y+K LQ +VK
Sbjct: 316 A-RRGQATDPHSIAERLRREKISDRMKDLQELVPNSNKTNKASMLDEIIDYVKFLQLQVK 374
Query: 197 ILEEQANKKTIESVV-FVNKTQLSDEG 222
+L + E+VV + +TQ G
Sbjct: 375 VLS-MSRLGAAEAVVPLLTETQTESPG 400
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 143 (55.4 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 35/112 (31%), Positives = 67/112 (59%)
Query: 138 GNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKI 197
G R + H ++E++RR +++++ AL +++P K DKAS+L DAI+YLKQLQ +V++
Sbjct: 28 GKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQM 87
Query: 198 LEEQANKKTIESVVFVNKTQLSDEGDN-PNGAFNEALPEIEARFCDKSVLIR 248
L ++ + +++ LS ++ P + AL + A+ D SV+++
Sbjct: 88 L-------SMRNGLYLPPVNLSGAPEHLPIPQMSAALDQNSAKASDPSVVLQ 132
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 143 (55.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/185 (24%), Positives = 95/185 (51%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQ--- 201
HI ER RR+++++ L +++P ++ D+AS++G AI Y+K+L+ ++ +E +
Sbjct: 117 HIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEHILQSMEPKRTR 176
Query: 202 -----ANKKTIESVV-----FVNKTQLSDEG--DNPNGAFNEALPEIEARFCDKSVLIRV 249
+K + S+V F + Q S + D P + + A EIE + I++
Sbjct: 177 THDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPESSSSPA--EIEVTVAESHANIKI 234
Query: 250 HCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVL-DVTIIAQMDVEFNMTVKDLVKNL 308
+K+ K++ ++ L LT+++ +V T +S+L +++ + + N TV D+ L
Sbjct: 235 MTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRVEEGSQLN-TVDDIATAL 293
Query: 309 HSAFQ 313
+ +
Sbjct: 294 NQTIR 298
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 104 (41.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/63 (33%), Positives = 45/63 (71%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
HI ER RR ++++ L +++P +++ D+AS++G AI+++K+L+++++ LE Q K
Sbjct: 92 HIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQ--K 149
Query: 205 KTI 207
+T+
Sbjct: 150 RTL 152
Score = 84 (34.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 233 LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQ 292
L +IE + +RV +R G K++A ++ L LTV++ +V T S VL T+ +
Sbjct: 258 LADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVL-YTLSVK 316
Query: 293 MDVEFNMT-VKDLVKNLH 309
++ ++T V D+ +H
Sbjct: 317 VEEGCSLTTVDDIAAAVH 334
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 142 (55.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/194 (28%), Positives = 99/194 (51%)
Query: 41 FGENLQHSY--THPSFNNNTGIDRPQKQLKTSTWNSSETGFNP-NNVSSINMNQMGILKP 97
FG NLQ T P F + G++ Q+ + + +S+ + N V S+ Q+G
Sbjct: 30 FGVNLQTDQEDTFPDFVSY-GVNLQQEPDEVFSIGASQLDLSSYNGVLSLEPEQVG---- 84
Query: 98 KQETGAGYPSDILPSQVSFGNNQNYVFKASQ------GAKRISPGAGNRLSNTQDHIIAE 151
+Q+ ++ +++ G++ V + + KR G+ +R T+ E
Sbjct: 85 QQDCEVVQEEEV---EINSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTK--ACRE 139
Query: 152 RKRREKLSQRFIALSAIV-PG-LKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIES 209
R RREKL++RF+ LS+++ PG K DK ++L DAI+ L QL+++ LEE N+K +E
Sbjct: 140 RLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEE-TNQKLLEE 198
Query: 210 V--VFVNKTQLSDE 221
+ + K +L +E
Sbjct: 199 IKSLKAEKNELREE 212
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 131 (51.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQA-- 202
HI ER RR +++Q L +++P K D+AS++G AI ++K+L+ K+ LE Q
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 203 NKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIV 262
N K +SV + E +NP+ + +L + D S E R G +
Sbjct: 150 NAKLNQSVTSSTSQDSNGEQENPHQPSSLSLSQFFLHSYDPSQ------ENRNGSTSSVK 203
Query: 263 AEIEKLHLTVINS 275
+E L +T+I +
Sbjct: 204 TPMEDLEVTLIET 216
Score = 50 (22.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 13/51 (25%), Positives = 30/51 (58%)
Query: 260 KIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMT-VKDLVKNLH 309
K+VA ++ L L++++ SV T + + +I A+++ ++ V D+ +H
Sbjct: 244 KLVASLQSLSLSILHLSVTTLDNYAI-YSISAKVEESCQLSSVDDIAGAVH 293
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/92 (33%), Positives = 58/92 (63%)
Query: 125 KASQGAKRISP---GAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASV 180
++ G K P G G++ S + + H ++ER+RR++++++ AL ++P K+DKAS+
Sbjct: 322 ESGDGRKEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASM 381
Query: 181 LGDAIKYLKQLQEKVKILEEQANKKTIESVVF 212
L +AI+YLK LQ +V+I+ + +V+F
Sbjct: 382 LDEAIEYLKSLQLQVQIMSMASGYYLPPAVMF 413
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 107 (42.7 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
HI ER RR+++++ L +++P +K+ D+AS++G + Y+K+LQ+ + LE + +
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
Query: 205 K 205
K
Sbjct: 199 K 199
Score = 79 (32.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/80 (17%), Positives = 44/80 (55%)
Query: 233 LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQ 292
LP+++ F +++++ ++ G KI+A +E L ++++ + T + ++ + +
Sbjct: 317 LPDVKVEFAGANLVLKTVSQRSPGQAVKIIAALEGRSLEILHAKISTVDDTAVN-SFTVK 375
Query: 293 MDVEFNMTVKDLVKNLHSAF 312
+ +E ++ ++LV+ + F
Sbjct: 376 IGIECELSAEELVQVIQQTF 395
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 139 (54.0 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
HI ER RR ++ +L +++P + + D+A+V+G AI Y+KQL++++ L+ A +
Sbjct: 119 HIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAE 178
Query: 205 KTIESVVFVNKTQLSDEGD-NPN-GAFNEALP----EIEARFC-DKSVLIRVHCEKRKGV 257
++ VV T SD +P +++EA ++EA V +RV + G
Sbjct: 179 RSGVGVVAAAATAASDGVFVSPQYTSYSEARGGSGVDVEATAAVGGHVRVRVAGRRWTGR 238
Query: 258 FEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVEFNMTVKDLVKNLHSAF 312
+ VA +E L LTV++ +V + G V + V+ T+ L+ ++ S F
Sbjct: 239 LVRAVAAMEDLRLTVLHLAVTSVGHDA--VVYCFNLKVKTTTTLHHLLLHVPSFF 291
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 136 (52.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 40/149 (26%), Positives = 71/149 (47%)
Query: 150 AERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIES 209
AER+RR +L+ AL A+VP + KM K + L DAI+++K LQ +V L+ Q E+
Sbjct: 69 AERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQRQLGDSPGEA 128
Query: 210 VVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLH 269
S+ A + E+ + K L ++ KR G+F K++ +
Sbjct: 129 WEKQGSASCSESFVPTENAHYQGQVELISLGSSKYNL-KIFWTKRAGLFTKVLEALCSYK 187
Query: 270 LTVINSSVMTF---GSSVLDVTIIAQMDV 295
+ V++ + ++F S + + + DV
Sbjct: 188 VQVLSLNTISFYGYAESFFTIEVKGEQDV 216
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 139 (54.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 56/210 (26%), Positives = 103/210 (49%)
Query: 125 KASQGAKRI-SPGAGNRLSNTQ-DHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASV 180
K + KR +P + + N + HI ER RR ++++ +L +++P L++ D+AS+
Sbjct: 93 KEKRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASI 152
Query: 181 LGDAIKYLKQLQEKVKILEEQANK-------KTIE-----SVVFVNKTQLSDEGDNPNG- 227
+G AI ++K+L++ ++ LE + K KT S+ N + S + NG
Sbjct: 153 VGGAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGF 212
Query: 228 --AFNEA-LPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSV 284
F E+EA V ++V C++ K K + IE+L L +++ ++ SS
Sbjct: 213 TARFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTI----SSS 268
Query: 285 LDVTIIAQMDVEFNMTVKDLVKNLHSAFQL 314
D I + FN+ ++D K L SA ++
Sbjct: 269 FDFVIYS-----FNLKMEDGCK-LGSADEI 292
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 135 (52.6 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 52/196 (26%), Positives = 89/196 (45%)
Query: 16 DLSFMNQW-HMMNSIDEFNLLPIAAAFGENLQHSYTHPSFNNNTGIDRPQKQLKTSTWN- 73
D MN H M + EF P ++ F + H+ T+P N+T +
Sbjct: 2 DSDIMNMMMHQMEKLPEF-CNPNSSFFSPD--HNNTYPFLFNSTHYQSDHSMTNEPGFRY 58
Query: 74 SSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNYVFKASQ----- 128
S NP+++S N + K+ S+ + + + +F+ +
Sbjct: 59 GSGLLTNPSSISP-NTAYSSVFLDKRNN-----SNNNNNGTNMAAMREMIFRIAVMQPIH 112
Query: 129 -GAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
+ + P + ++D +A R RRE++S+R L +VPG KMD AS+L +AI
Sbjct: 113 IDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIH 172
Query: 187 YLKQLQEKVKILEEQA 202
Y+K L+++V+ LEEQA
Sbjct: 173 YVKFLKKQVQSLEEQA 188
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 139 (54.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 52/173 (30%), Positives = 80/173 (46%)
Query: 63 PQKQLKTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNY 122
P K S +SS T N + VS N G + KQ+ AG + + S G+N++
Sbjct: 121 PSGNGKESPASSSLTASN-SKVSGENGGSKGGKRSKQDV-AGSSKNGVEKCDSKGDNKDD 178
Query: 123 VFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVL 181
K + K R T H +AER RREK+S+R L +VPG ++ KA +L
Sbjct: 179 A-KPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVML 237
Query: 182 GDAIKYLKQLQEKVKILEEQANKKTIESVVFVN-KTQLSDEGDNPNGAFNEAL 233
+ I Y++ LQ +V+ L + T+ + N LS E P + ++L
Sbjct: 238 DEIINYVQSLQRQVEFLSMKL--ATVNPRMEFNANASLSTEMIQPGESLTQSL 288
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 27/64 (42%), Positives = 44/64 (68%)
Query: 135 PGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEK 194
P A R + H ++ER+RR++++++ AL +VP K DKAS+L +AI+YLK LQ +
Sbjct: 221 PAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQ 280
Query: 195 VKIL 198
V+I+
Sbjct: 281 VQIM 284
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 78 GFNPNNVSSINMNQMGILKPKQETGA-GYPSDILPSQVSFGNNQNYVFKASQGAKRISPG 136
G N NNV N G GA G +D + G S + S
Sbjct: 135 GGNNNNVQG---NSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPSSRS 191
Query: 137 AGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVK 196
+ R + H ++E++RR +++++ AL +++P K DKAS+L +AI+YLKQLQ +V+
Sbjct: 192 SSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQ 251
Query: 197 IL 198
+L
Sbjct: 252 ML 253
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 128 (50.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 135 PGAGN-RLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQE 193
P N R+S+ ++A R+RRE++S++ L IVPG KMD AS+L +AI+Y K L+
Sbjct: 111 PNRRNVRISDDPQTVVA-RRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKR 169
Query: 194 KVKILE 199
+V+IL+
Sbjct: 170 QVRILQ 175
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 100 (40.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/68 (32%), Positives = 43/68 (63%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILE 199
S HI ER RR ++++ L +++P + + D+AS++G AI ++K+L++ ++ LE
Sbjct: 92 SQRMTHIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQLLQSLE 151
Query: 200 EQANKKTI 207
Q K+T+
Sbjct: 152 AQ--KRTL 157
Score = 77 (32.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 219 SDEGDNPNGAFNE---ALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINS 275
+ +G GA E + +IE + IRV +R G K+VA ++ L LTV++
Sbjct: 217 AQDGGGGGGAAAENRAGVADIEVSLVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHL 276
Query: 276 SVMTFGSSVL 285
+V GS L
Sbjct: 277 NVTALGSLAL 286
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 129 (50.5 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/158 (24%), Positives = 75/158 (47%)
Query: 145 QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
+ H AERKRR++++ L +VP +MDKA++LG+ ++++++L+ + E A+
Sbjct: 21 RSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRADDATEGADV 80
Query: 205 KTIESVVFVN-KTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVA 263
V + + DEG+ G + + + R+ + V V C R G+ +
Sbjct: 81 VVPGEGDEVGVEDEDDDEGERDEGCY--VVGGGDRRW-RRRVRAWVCCADRPGLMSDLGR 137
Query: 264 EIEKLHLTVINSSVMTFGS---SVLDVTIIAQMDVEFN 298
+ + + + V T G SVL++ ++ D N
Sbjct: 138 AVRSVSARPVRAEVATVGGRTRSVLELDVVVASDAADN 175
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 132 (51.5 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/136 (33%), Positives = 63/136 (46%)
Query: 77 TGFNPNNVSSINMNQMGILKPKQETGA---GYPSDILP---SQVSFGNNQNY---VFKAS 127
TGF+ ++ S N M L A G+ + LP Q S G Q A+
Sbjct: 57 TGFHHHDADSRNQITMIPLSHNHPNDALFNGFSTGSLPFHLPQGSGGQTQTQSQATASAT 116
Query: 128 QGAKRISPGA-----GNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLG 182
G P R T H IAER RRE++++R +L +VP K DKAS+L
Sbjct: 117 TGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLD 176
Query: 183 DAIKYLKQLQEKVKIL 198
+ I Y+K LQ +VK+L
Sbjct: 177 EIIDYVKFLQLQVKVL 192
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 93 GILKPKQETGAGYPSDILPSQVSFGNNQNYVFKASQGA-------KRISPGAGNRLSNTQ 145
G LKP ETG + D+L ++ S + SQ A I P R
Sbjct: 94 GFLKP-DETGKRFQDDVLDNRCSSMKPIFHGQPMSQPAPPMPHQQSTIRPRVRARRGQAT 152
Query: 146 D-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
D H IAER RRE++++R +L +VP + K D+A+++ + + Y+K L+ +VK+L
Sbjct: 153 DPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVL 206
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 127 (49.8 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 105 YPSDILPSQVSFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIA 164
+P L V+ + V GA+R PGA +LS T +A R+RR ++S RF
Sbjct: 19 HPQPYLQHPVAGALGDSRVRGGGSGARR-RPGA--KLS-TDPQSVAARERRHRISDRFRV 74
Query: 165 LSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKI 197
L ++VPG KMD S+L AI Y+K L+ ++ +
Sbjct: 75 LRSLVPGGSKMDTVSMLEQAIHYVKFLKTQISL 107
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 133 (51.9 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
T H IAER RREK+S+R L +VP K DKAS+L + I Y+K LQ +VK+L
Sbjct: 247 TDPHSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVL 301
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 133 (51.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 129 GAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKY 187
G K NR S + H ++ER+RR+++++R AL ++P K DKAS+L +AI Y
Sbjct: 243 GNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDY 302
Query: 188 LKQLQEKVKIL 198
LK LQ +++++
Sbjct: 303 LKSLQLQLQVM 313
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 130 (50.8 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 120 QNYVFKASQGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKA 178
Q V S R P R D H IAER RRE++++R +L +VP K DKA
Sbjct: 82 QGTVSTTSAPVVRQKPRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKA 141
Query: 179 SVLGDAIKYLKQLQEKVKIL 198
S+L + I+Y++ LQ +VK+L
Sbjct: 142 SMLDEIIEYVRFLQLQVKVL 161
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 127 (49.8 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 149 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQA 202
+A R RRE++S+R L +VPG KMD AS+L +AI Y+K L+++V+ LEE A
Sbjct: 132 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHA 185
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 133 (51.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 25/67 (37%), Positives = 46/67 (68%)
Query: 132 RISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQL 191
R+S + R + H ++ERKRR+++++R AL ++P K DKAS+L +AI+Y+K L
Sbjct: 274 RVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSL 333
Query: 192 QEKVKIL 198
Q +++++
Sbjct: 334 QLQIQMM 340
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 131 (51.2 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKT 206
H +ERKRR+K++QR L +VP K DKAS+L + I+YLKQLQ +V ++
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMMSRMNMPSM 277
Query: 207 IESVVFVNKTQLSDE-GDNPNG 227
+ + + QL NP G
Sbjct: 278 MLPMAMQQQQQLQMSLMSNPMG 299
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
T H IAER RRE++++R AL +VP K DKAS+L + I Y+K LQ +VK+L
Sbjct: 146 TDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVL 200
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/140 (26%), Positives = 66/140 (47%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ 201
S ++ H +AE++RR++++ AL +VP K+DKA++L I+ +K+L++K
Sbjct: 62 SLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIF 121
Query: 202 ANKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKI 261
+ T V V +SD N N +A FC CE + +I
Sbjct: 122 QDLPTEADEVTVQPETISDFESNTNTII------FKASFC---------CEDQPEAISEI 166
Query: 262 VAEIEKLHLTVINSSVMTFG 281
+ + KL L I + +++ G
Sbjct: 167 IRVLTKLQLETIQAEIISVG 186
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/71 (38%), Positives = 48/71 (67%)
Query: 129 GAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKY 187
G R S + S T + H ++ER+RR++++++ AL ++P K+DKAS+L +AI+Y
Sbjct: 298 GVLRKSGTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEY 357
Query: 188 LKQLQEKVKIL 198
LK LQ +V+++
Sbjct: 358 LKTLQLQVQMM 368
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 129 (50.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 49/168 (29%), Positives = 92/168 (54%)
Query: 136 GAGNRLSN----TQ-DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQ 190
G G R ++ TQ H+I+ERKRREKL++ F AL +++P K DKASVL A + L
Sbjct: 274 GGGGRYTSGPSATQLQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSS 333
Query: 191 LQEKV-KILEEQANKKTIESVVFVNKTQLSDEGD-NPNGAFN---EALPEIEAR--FCDK 243
LQ ++ K+LE N++ +E+ + + ++ E D P FN +PE +R D
Sbjct: 334 LQGEISKLLER--NRE-VEAKL-AGEREI--ENDLRPEERFNVRIRHIPESTSRERTLDL 387
Query: 244 SVLIRVHCEKRKGVFEKIVAEIEKLH-LTVINSSVMTFGSSVLDVTII 290
V++R + + +++ +++++ +++++ T + D +I+
Sbjct: 388 RVVLRGDIIRVDDLMIRLLEFLKQINNVSLVSIEARTLARAEGDTSIV 435
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 73 NSSETGFNPNNVSSINMNQMGIL-KPKQETGA 103
+SS + +PNN+S + ++ KP T A
Sbjct: 121 SSSSSSLSPNNISEYSSLLFPLIPKPSTTTEA 152
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 119 (46.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/69 (36%), Positives = 46/69 (66%)
Query: 130 AKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLK 189
A+R +P +R + + H +ER+RR++++++ AL ++P K DK S+L +AI YLK
Sbjct: 3 ARRPTPTRRSR--SAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLK 60
Query: 190 QLQEKVKIL 198
LQ ++++L
Sbjct: 61 SLQLQLQML 69
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 126 (49.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 93 GILKPKQETGAGYPSDILPSQVS--FGNNQNYVFKASQGAKRISPGA---GNRLSNTQDH 147
G+ P G P ++ P+ + F Q+ A+ G + +P R T H
Sbjct: 85 GLFPPVFGGGGVQPPNLRPTPPTQVFHPQQSKQGGAAVGPQPPAPRPKVRARRGQATDPH 144
Query: 148 IIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQ------ 201
IAER RRE++++R AL +VP K D+A++L + + Y+K L+ +VK+L
Sbjct: 145 SIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGAG 204
Query: 202 ANKKTIESVVFVNKTQLSDEGDN 224
A + + + K + SD G N
Sbjct: 205 AVAQLVADIPLSVKGEASDSGGN 227
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 122 (48.0 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 135 PGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEK 194
P N +++ +A R RRE++SQR AL +VPG ++D AS+L +AI+Y+K L+
Sbjct: 113 PRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLDTASMLEEAIRYVKFLKGH 172
Query: 195 VKILEEQA 202
V+ LE A
Sbjct: 173 VQSLERAA 180
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 59 GIDRPQKQLKTSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGN 118
G+ R K++ T T +S +G N + ++P++ET +++
Sbjct: 290 GLGRRGKEVATETAGTSYSGVNKAETERVQ------IQPERET-----------KITEDK 332
Query: 119 NQNYVFKASQGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDK 177
+ QG + + S D H ++ER+RRE++++R L ++P +K DK
Sbjct: 333 KREETIAEIQGTEEAHGSTSRKRSRAADMHNLSERRRRERINERMKTLQELLPRCRKTDK 392
Query: 178 ASVLGDAIKYLKQLQEKVKIL 198
S+L D I+Y+K LQ +++++
Sbjct: 393 VSMLEDVIEYVKSLQLQIQMM 413
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/158 (25%), Positives = 76/158 (48%)
Query: 141 LSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEE 200
L+ ++ H AER+RR++++ L +++P K DKAS+L + I+++K+L+ + + E
Sbjct: 119 LAASRSHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAMME 178
Query: 201 Q--ANKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVF 258
A + + V + T+ D+ + A +E R ++ L CE R +
Sbjct: 179 DGAAGGEAAAAPVVLLPTE--DDELEVDAAADEG-----GRLVARASLC---CEDRADLI 228
Query: 259 EKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQMDVE 296
I + L L + + T G V V +IA ++ E
Sbjct: 229 PGIARALAALRLRARRAEIATLGGRVRSVLLIAAVEEE 266
>UNIPROTKB|Q6ZKI8 [details] [associations]
symbol:OJ1119_D01.9 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:HQ858852 EMBL:AP003876 EMBL:AK102951
RefSeq:NP_001060960.1 UniGene:Os.18333 IntAct:Q6ZKI8
EnsemblPlants:LOC_Os08g04390.2 GeneID:4344627 KEGG:osa:4344627
OMA:REKMRRN Uniprot:Q6ZKI8
Length = 253
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 93 GILK--PKQETGAGYPSDILPS------QVS-FGNNQNYVFKASQGAKRISPGAGNRLSN 143
GIL+ P GA +P D PS +VS + N +YV K KR+ G+ R ++
Sbjct: 28 GILEDLPAAACGA-FPWDASPSCSNPSVEVSSYVNTTSYVLKEPGSNKRVRSGSCGRPTS 86
Query: 144 TQDHIIAERKRREKLSQRFIAL-SAIVPGLK-KMDKASVLGDAIKYLKQLQEKVKILEEQ 201
E+ RR+K++ RF+ L + + PG K DKA++L DA + + QL+ + K L++
Sbjct: 87 KASR---EKIRRDKMNDRFLELGTTLEPGKPVKSDKAAILSDATRMVIQLRAEAKQLKD- 142
Query: 202 ANKKTIESV--VFVNKTQLSDE 221
N+ + + + K +L DE
Sbjct: 143 TNESLEDKIKELKAEKDELRDE 164
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 124 (48.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKM-DKASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S+R L +VPG K+ KASVL + I Y++ LQ +V+ L
Sbjct: 144 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFL 199
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 140 RLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE 199
R+S T +A R RRE++S+R L +VPG KMD AS+L +AI Y+K L+ +V+ LE
Sbjct: 156 RIS-TDPQSVAARMRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLE 214
Query: 200 EQA 202
A
Sbjct: 215 RAA 217
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/65 (43%), Positives = 40/65 (61%)
Query: 135 PGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEK 194
P N +T +A R+RRE++S++ L +VPG KMD AS+L +A YLK L+ +
Sbjct: 268 PKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQ 327
Query: 195 VKILE 199
VK LE
Sbjct: 328 VKALE 332
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 123 (48.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKM-DKASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S+R L +VPG K+ KASVL + I Y++ LQ +V+ +
Sbjct: 136 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQVEFM 191
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 124 (48.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/139 (30%), Positives = 68/139 (48%)
Query: 74 SSETGFN----PNNVSSINMNQMGILKPKQETGAG--YPSDILPSQVS-----FGNN--Q 120
S TGF+ P +S G L+P+ G+G + D++ ++ S F Q
Sbjct: 70 SGPTGFHNQMFPLGLSLDQGKGPGFLRPEGGHGSGKRFSDDVVDNRCSSMKPVFHGQPMQ 129
Query: 121 NYVFKASQGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKAS 179
A I P R D H IAER RRE++++R AL +VP + K D+A+
Sbjct: 130 QPPPSAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAA 189
Query: 180 VLGDAIKYLKQLQEKVKIL 198
++ + + Y+K L+ +VK+L
Sbjct: 190 MIDEIVDYVKFLRLQVKVL 208
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 125 (49.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQAN 203
H +ER+RR++++QR L ++P K DK S+L D I++LKQLQ +V+ + +AN
Sbjct: 171 HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSLRAN 227
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 128 QGAKRISPGAGNRLSNTQ-DHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
+G ++ A + +++Q H+++ERKRREKL+ F L +++P K DK +VL +A K
Sbjct: 247 RGRQQEEAAAASATNSSQLYHMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAK 306
Query: 187 YLKQLQEKVKILE 199
YLK L+ ++ LE
Sbjct: 307 YLKSLETEITELE 319
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 122 (48.0 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKM-DKASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S++ AL I+PG K+ KA VL + I Y++ LQ +V+ L
Sbjct: 161 TDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFL 216
>UNIPROTKB|Q8H7N8 [details] [associations]
symbol:OJ1217B09.8 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC121489
EMBL:HQ858866 EMBL:AK107555 RefSeq:NP_001049217.1 UniGene:Os.31303
STRING:Q8H7N8 EnsemblPlants:LOC_Os03g08930.1 GeneID:4331887
KEGG:dosa:Os10t0376900-01 KEGG:osa:4331887 OMA:RIPPLHL
ProtClustDB:CLSN2693619 Uniprot:Q8H7N8
Length = 329
Score = 104 (41.7 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 27/86 (31%), Positives = 49/86 (56%)
Query: 147 HIIAERKRREKLSQRFIALSAIVPGL--KKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
HI ER RR ++++ L +++P ++ D+AS++G AI Y+K+L++ ++ LE Q +
Sbjct: 113 HIAVERNRRRQMNEYLAVLRSLMPASYSQRGDQASIVGGAINYVKELEQLLQSLEVQKSL 172
Query: 205 KTIESVVFVNKTQLSDE-GDNPNGAF 229
K N++ D GD+P F
Sbjct: 173 K--------NRSGAMDAAGDSPFAGF 190
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 18/89 (20%), Positives = 43/89 (48%)
Query: 222 GDNPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFG 281
G +G + A+ +IE + ++V +R K+V +++L + ++ +V T
Sbjct: 226 GSAESGRQSAAIADIEVTMVEGHASLKVLARRRPKQLLKLVVGLQQLRIPPLHLNVTTVD 285
Query: 282 SSVL-DVTIIAQMDVEFNMTVKDLVKNLH 309
+ VL ++ + D + +V+D+ +H
Sbjct: 286 AMVLYSFSLKVEDDSKLG-SVEDIATAVH 313
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 119 (46.9 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 149 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
+A R RRE++S+R L +VPG KMD AS+L +AI+Y+K L+ ++++L
Sbjct: 132 VAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 118 (46.6 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 34/124 (27%), Positives = 64/124 (51%)
Query: 145 QDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQANK 204
+ H AERKRRE+++ L +VP +MDKA++LG+ ++Y+++L+ +
Sbjct: 30 RSHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSEAAGSAAVVPG 89
Query: 205 KTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFC--DKSVLIRVHCEKRKGVFEKIV 262
+ E V V + ++ EG + + +A ++A C D+ L+ + + V + V
Sbjct: 90 EGDE--VVVEEEEVEVEGCSCDAGERQAARRVKASVCCADRPGLMSELGDAERSVSARAV 147
Query: 263 -AEI 265
AEI
Sbjct: 148 RAEI 151
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 123 (48.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 141 LSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEE 200
L+ ++ H AER+RRE+++ L +I+P K DKAS+L + I+++K+L+ + ++ E
Sbjct: 172 LAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISE 231
Query: 201 QANKKTIESVVFVNKTQLSDEGD 223
T + V T+ + GD
Sbjct: 232 TNLVPTESDELTVAFTEEEETGD 254
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 119 (46.9 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 149 IAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQA 202
+A R RRE++S+R L +VPG KMD AS+L +AI Y+K L+ +V+ LE A
Sbjct: 154 VAARLRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAA 207
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 122 (48.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 115 SFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKK 174
+F N+ + V K + I A R T H IAER RREK+S+R L +VPG K
Sbjct: 152 NFSNDSSKVTKELEKTDYIHVRA-RRGQATDSHSIAERVRREKISERMKFLQDLVPGCDK 210
Query: 175 MD-KASVLGDAIKYLKQLQEKVKIL 198
+ KA +L + I Y++ LQ +++ L
Sbjct: 211 ITGKAGMLDEIINYVQSLQRQIEFL 235
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 117 GNNQNYVFKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMD 176
G +N + + + G R G G+R S T ER+RR + RF L ++P K+D
Sbjct: 223 GGFENEILEFNNGVTR--KGRGSRKSRTSP---TERERRVHFNDRFFDLKNLIPNPTKID 277
Query: 177 KASVLGDAIKYLKQLQEKVKILEEQANKK 205
+AS++G+AI Y+K+L ++ + KK
Sbjct: 278 RASIVGEAIDYIKELLRTIEEFKMLVEKK 306
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 30/93 (32%), Positives = 55/93 (59%)
Query: 112 SQVSFGNNQNYVFKASQGAKRISPGAGNRL-----SNTQD-HIIAERKRREKLSQRFIAL 165
S S GN +++ +++Q +K++S G + ++ +D +A + RRE++S+R L
Sbjct: 165 SPKSAGNKRSHTGESTQPSKKLSSGVTGKTKPKPTTSPKDPQSLAAKNRRERISERLKIL 224
Query: 166 SAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
+VP K+D ++L AI Y+K LQ +VK+L
Sbjct: 225 QELVPNGTKVDLVTMLEKAISYVKFLQVQVKVL 257
>TAIR|locus:2012146 [details] [associations]
symbol:RGE1 "AT1G49770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009790 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011807 EMBL:AF488623 IPI:IPI00539453 PIR:D96534
RefSeq:NP_175399.2 UniGene:At.38170 ProteinModelPortal:Q9FXA3
SMR:Q9FXA3 EnsemblPlants:AT1G49770.1 GeneID:841400
KEGG:ath:AT1G49770 TAIR:At1g49770 eggNOG:NOG272533
HOGENOM:HOG000272699 InParanoid:Q9FXA3 OMA:DHEIHIW PhylomeDB:Q9FXA3
ProtClustDB:CLSN2918353 Genevestigator:Q9FXA3 Uniprot:Q9FXA3
Length = 308
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 110 LPSQVSFGNNQNYVFKASQGAKRISPGAGNRLSNTQDHII---AERKRREKLSQRFIALS 166
LPS S + + +G KR N + DH I ER+RR+K+ F L
Sbjct: 34 LPSHPSHPSPEIQTTTVKKGKKRTKRNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLH 93
Query: 167 AIVPGLK-KMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIESVVFVNKT 216
A++P L K DK++++ +A+ +K L++ ++ LE Q +K S N T
Sbjct: 94 ALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQKLEKLQYSSASTNTT 144
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 118 (46.6 bits), Expect = 0.00014, P = 0.00014
Identities = 61/241 (25%), Positives = 105/241 (43%)
Query: 24 HMMNSIDEFNLLPIA-AAFGENLQHSYTHPSFNNNTGIDRPQKQLKTSTWNSSETGFNPN 82
++ + ID+ +L P+ + E++ + N+G ++ KT+T SS +
Sbjct: 28 NLTSFIDQNHLYPLPNISTVEDISFLEYNVDKTENSGSEKLANTTKTATTGSSSCDQLSH 87
Query: 83 NVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNYVFKASQGAKRISPGAGNRLS 142
S+I G + ++ + + + + S Q K I A R
Sbjct: 88 GPSAIT--NTGKTRGRKARNSNNSKEGVEGRKS--KKQKRGSKEEPPTDYIHVRA-RRGQ 142
Query: 143 NTQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKILEEQ 201
T H +AER RREK+S+R L +VPG K+ KA +L + I Y++ LQ +V+ L +
Sbjct: 143 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMK 202
Query: 202 ANKKTIESVVF-----VNKTQLSDEGDNPN-G-AFNEALPEIEARF---CDKSVLIRVHC 251
+I VV+ ++ L E +P G +F A+P F D SV + H
Sbjct: 203 LT--SISPVVYDFGSDLDGLILQSEMGSPEVGTSFTNAMPTTTPIFPSLLDNSV-VPTHA 259
Query: 252 E 252
+
Sbjct: 260 Q 260
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 153 KRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQAN 203
KRR++++Q+ L +VP K DKAS+L + I YLKQLQ +V+++ +
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVMSRMGS 62
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 127 SQGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAI 185
+ G + + S T + H +AER+RREK++++ L ++P K K S L DAI
Sbjct: 239 THGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAI 298
Query: 186 KYLKQLQEKVK 196
+Y+K LQ +++
Sbjct: 299 EYVKSLQSQIQ 309
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKM-DKASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S+R L +VPG K+ KA VL + I Y++ LQ +V+ L
Sbjct: 144 TDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 199
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 136 GAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKV 195
G G++ S T + ER+RR + RF L ++P K +AS++ D I Y+ +LQ V
Sbjct: 16 GKGSKKSRT---FLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLV 72
Query: 196 KILEEQANKK 205
L+ KK
Sbjct: 73 SELKYLVEKK 82
>UNIPROTKB|Q6ZGM4 [details] [associations]
symbol:OJ1442_E05.19 "cDNA clone:006-303-B03, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG277469
EMBL:AP004121 EMBL:EU837263 EMBL:HQ858854 EMBL:AK060881
EMBL:AK103434 EMBL:AK104188 RefSeq:NP_001045680.1 UniGene:Os.17893
EnsemblPlants:LOC_Os02g02480.1 EnsemblPlants:LOC_Os02g02480.3
GeneID:4328080 KEGG:osa:4328080 OMA:AIFCDGG Uniprot:Q6ZGM4
Length = 236
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 28/75 (37%), Positives = 52/75 (69%)
Query: 151 ERKRREKLSQRFIALSAIV-PGLK-KMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIE 208
E+ RR++L+ RF+ LS+++ P + K+DKA++L DA + L +L+ + + L+E +N+K E
Sbjct: 75 EKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLAELRGEAEKLKE-SNEKLRE 133
Query: 209 SV--VFVNKTQLSDE 221
++ + V K +L DE
Sbjct: 134 TIKDLKVEKNELRDE 148
>UNIPROTKB|Q7XZF8 [details] [associations]
symbol:OSJNBb0033J23.9 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006083 OMA:RERIKSH EMBL:AC137507 STRING:Q7XZF8
EnsemblPlants:LOC_Os03g59670.1 Uniprot:Q7XZF8
Length = 268
Score = 116 (45.9 bits), Expect = 0.00020, P = 0.00020
Identities = 40/168 (23%), Positives = 79/168 (47%)
Query: 126 ASQGAKRISPGAGNR-LSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDA 184
A + A + A +R L+ +++H AE++RRE++ L A++ K+DKAS+L A
Sbjct: 49 AEEEAAAAAAAAQDRALAASRNHREAEKRRRERIKSHLDRLRAVLACDPKIDKASLLAKA 108
Query: 185 IKYLKQLQEKVKILEEQANKKTIESVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKS 244
++ ++ L++++ + E A + L+ G GA A EA C
Sbjct: 109 VERVRDLKQRMAGIGEAAPAHLFPTE-HDEIVVLASGGGGVGGA-GGAAAVFEASVC--- 163
Query: 245 VLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVMTFGSSVLDVTIIAQ 292
C+ R + +++ + L L + + + T G V +V ++A+
Sbjct: 164 ------CDDRCDLLPELIETLRALRLRTLRAEMATLGGRVRNVLVLAR 205
>TAIR|locus:2141216 [details] [associations]
symbol:B70 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50805 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:EF637083 EMBL:AL031187 EMBL:EF182720
EMBL:AY065362 EMBL:AY122937 IPI:IPI00529333 PIR:T05176
RefSeq:NP_193865.2 UniGene:At.28517 ProteinModelPortal:Q8VZ22
SMR:Q8VZ22 EnsemblPlants:AT4G21340.1 GeneID:827884
KEGG:ath:AT4G21340 TAIR:At4g21340 eggNOG:NOG319921
HOGENOM:HOG000095220 OMA:NESRMIS PhylomeDB:Q8VZ22
ProtClustDB:CLSN2690318 Genevestigator:Q8VZ22 Uniprot:Q8VZ22
Length = 301
Score = 117 (46.2 bits), Expect = 0.00020, P = 0.00020
Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEEQAN 203
T H + + R+EKL R AL +V K D ASVL DAI Y+K LQE+ I E+ +
Sbjct: 182 TPSHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQ--ITEKVST 239
Query: 204 KKTIESVVFVNKTQLSDEGDN 224
+ S+ + Q SD+ N
Sbjct: 240 SPHLNSIGSGEQKQWSDKSSN 260
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 43/127 (33%), Positives = 60/127 (47%)
Query: 95 LKPKQETGAGYPSDILPSQVSFGNNQNYVFKASQGAKRISPGA------GNRLSNTQDHI 148
+KPK E AG SD S V G + AK + P R T H
Sbjct: 163 VKPKAEQ-AG--SD---SSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHS 216
Query: 149 IAERKRREKLSQRFIALSAIVPGLKKM-DKASVLGDAIKYLKQLQEKVKILEEQANKKTI 207
+AER RRE++SQR L +VPG K+ KA +L + I Y++ LQ +V+ L + T+
Sbjct: 217 LAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKL--ATV 274
Query: 208 ESVVFVN 214
+ F N
Sbjct: 275 NPLDFSN 281
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 24/59 (40%), Positives = 42/59 (71%)
Query: 140 RLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
R +T+ H + ERKRR++ +++ AL ++P K DKAS+L +AIKY++ LQ +V+++
Sbjct: 227 RKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTLQLQVQMM 285
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 34/96 (35%), Positives = 50/96 (52%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKILEEQ- 201
T H +AER RRE++S+R L +VPG K+ KA +L + I Y++ LQ++V+ L +
Sbjct: 172 TDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKI 231
Query: 202 ANKKTIESVVFVNKT---QLSDEGDNPNGAFNEALP 234
A + + V QLS NP ALP
Sbjct: 232 AASNPVVNFNIVEDLFGRQLSQAACNPAALPAMALP 267
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 118 (46.6 bits), Expect = 0.00022, P = 0.00022
Identities = 35/107 (32%), Positives = 55/107 (51%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKILEEQ- 201
T H +AER RREK+S+R L +VPG K+ KA +L + I Y++ LQ++V+ L +
Sbjct: 214 TNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKL 273
Query: 202 --ANKKT---IESVVFVNKTQLSDE-----GDNPNGAFNEALPEIEA 238
N + I+ ++ + Q D G NP F +P + A
Sbjct: 274 ATVNPEINIDIDRILAKDLLQSRDRNTPTLGLNPFAGFQGNIPNLSA 320
>TAIR|locus:2115683 [details] [associations]
symbol:AT4G05170 "AT4G05170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 EMBL:AL161503 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000095220 EMBL:BT015446 IPI:IPI00532427 IPI:IPI01019413
PIR:A85065 RefSeq:NP_192426.2 UniGene:At.51015
ProteinModelPortal:Q9M0X8 SMR:Q9M0X8 DNASU:825865 GeneID:825865
KEGG:ath:AT4G05170 TAIR:At4g05170 eggNOG:NOG256664 PhylomeDB:Q9M0X8
ArrayExpress:Q9M0X8 Genevestigator:Q9M0X8 Uniprot:Q9M0X8
Length = 298
Score = 116 (45.9 bits), Expect = 0.00025, P = 0.00025
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 154 RREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE--EQANKKTIESVV 211
R+EKL R AL +V K D ASVL +A++Y+K LQE+V +L EQ +++
Sbjct: 175 RKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQQQ 234
Query: 212 FVNKTQLSDEGD 223
NK ++ +G+
Sbjct: 235 CSNKKSINTQGE 246
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 116 (45.9 bits), Expect = 0.00026, P = 0.00026
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S++ L IVPG K+ KA +L + I Y++ LQ++V+ L
Sbjct: 149 TDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFL 204
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 105 (42.0 bits), Expect = 0.00029, P = 0.00029
Identities = 26/71 (36%), Positives = 42/71 (59%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILEE--- 200
+ D + ++R++KL++R AL +V K D ASVL + ++Y++ LQE+VK+L
Sbjct: 31 SSDLSFSSKERKDKLAERISALQQLVSPYGKTDTASVLLEGMQYIQFLQEQVKVLSAPYL 90
Query: 201 QANKKTIESVV 211
QA T E V
Sbjct: 91 QATPSTTEEEV 101
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 35/92 (38%), Positives = 52/92 (56%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKILEEQ- 201
T +H +AER RREK+S+R L +VPG K+ KA +L + I Y++ LQ +V+ L +
Sbjct: 184 TNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQVEFLSMKL 243
Query: 202 --ANKKT---IESVVFVNKTQLSDEGDNPNGA 228
N + IES+V +K L G P+ A
Sbjct: 244 SAVNPRIDLDIESLVNNSKDVLRFPGQ-PSSA 274
>UNIPROTKB|Q6YTU1 [details] [associations]
symbol:P0419H09.4 "cDNA clone:002-131-D10, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP004213
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:HQ858861 EMBL:AP005918 EMBL:AK107626
RefSeq:NP_001062077.1 UniGene:Os.55174
EnsemblPlants:LOC_Os08g37730.1 GeneID:4345867 KEGG:osa:4345867
eggNOG:NOG250596 ProtClustDB:CLSN2919896 Uniprot:Q6YTU1
Length = 363
Score = 102 (41.0 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 19/60 (31%), Positives = 40/60 (66%)
Query: 142 SNTQDHIIAERKRREKLSQRFIALSAIVPG--LKKMDKASVLGDAIKYLKQLQEKVKILE 199
S HI ER RR+++++ L +++P +++ D+AS++G AI Y+K++++ ++ LE
Sbjct: 137 SQRMTHIAVERNRRKQMNEYLAVLRSLMPASYVQRGDQASIIGGAINYVKEMEQLLQSLE 196
Score = 55 (24.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 18/92 (19%), Positives = 45/92 (48%)
Query: 220 DEGD-NPNGAFNEALPEIEARFCDKSVLIRVHCEKRKGVFEKIVAEIEKLHLTVINSSVM 278
D+ D + +G+ ++ +IE + ++V +R ++VA ++ L V++ +V
Sbjct: 254 DDADADVSGSKPSSVADIEVTMVESHANLKVLSRRRPRQLLRMVAGLQHHRLAVLHLNVA 313
Query: 279 TFGSSVL-DVTIIAQMDVEFNMTVKDLVKNLH 309
+ G L +++ + D + +V D+ +H
Sbjct: 314 SAGHMALYSLSLKVEEDCQLT-SVDDIAAAVH 344
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 116 (45.9 bits), Expect = 0.00032, P = 0.00032
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S+R L ++VPG K+ KA +L + I Y++ LQ +V+ L
Sbjct: 188 TDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQVEFL 243
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 115 (45.5 bits), Expect = 0.00033, P = 0.00033
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 134 SPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVP---GLKKMDKASVLGDAIKYLKQ 190
S G NR S H E++RR K+++RF +L I+P +K DKAS L + I+Y+
Sbjct: 25 STGRRNRNSCRSKHSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHF 84
Query: 191 LQEKVKILEE 200
LQEKV + E+
Sbjct: 85 LQEKVHMYED 94
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 39/158 (24%), Positives = 73/158 (46%)
Query: 85 SSINMNQMGILKPKQETGAGYPSDIL--PSQVSFGNNQNYVFKASQ------GAKRIS-- 134
SSI+ + G P G G D L P + + +++A+ GA+
Sbjct: 306 SSISFDGRG---PGGNCGGGGGDDPLYEPDTEALAQVKEMIYRAAAMRPVTLGAEDAGER 362
Query: 135 PGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEK 194
P N ++ +A R+RRE++S+R L +VPG KMD AS+L +A YL+ L+ +
Sbjct: 363 PRRRNVRISSDPQTVAARQRRERISERLRVLQKLVPGGAKMDTASMLDEAANYLRFLKSQ 422
Query: 195 VKILEEQANKKTIESVVFVNKTQLSDEGDNPNGAFNEA 232
++ L+ + + + +N + + + +N +
Sbjct: 423 IRELQTLDRRNYPNAAMSINTAAATTMATSSSPTYNNS 460
>TAIR|locus:2086198 [details] [associations]
symbol:bHLH34 "AT3G23210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025608 EMBL:AY099674 EMBL:AY128853 EMBL:AF488573
IPI:IPI00543123 RefSeq:NP_188962.2 UniGene:At.6338
ProteinModelPortal:Q9LTC7 SMR:Q9LTC7 EnsemblPlants:AT3G23210.1
GeneID:821899 KEGG:ath:AT3G23210 TAIR:At3g23210 eggNOG:NOG287253
HOGENOM:HOG000238732 InParanoid:Q9LTC7 OMA:NEDNIFQ PhylomeDB:Q9LTC7
ProtClustDB:CLSN2689429 Genevestigator:Q9LTC7 Uniprot:Q9LTC7
Length = 320
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 28/75 (37%), Positives = 50/75 (66%)
Query: 151 ERKRREKLSQRFIALSAIV-PG-LKKMDKASVLGDAIKYLKQLQEKVKILEEQANKKTIE 208
E+ RREKL+ +F+ LS+++ PG K DK+++L DAI+ + QL+ + L+E N+K +E
Sbjct: 171 EKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQE-TNQKLLE 229
Query: 209 SV--VFVNKTQLSDE 221
+ + +K +L +E
Sbjct: 230 EIKSLKADKNELREE 244
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 114 (45.2 bits), Expect = 0.00042, P = 0.00042
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 91 QMGILKPKQETGAGYPSDILPSQVSFGNNQNYVFKASQGAK--RISPGAGNRLSN----- 143
Q G+L P G P P+ G+ + ++SQ + GAG +
Sbjct: 141 QFGLLFPSTSGGGVSPERAAPAPAPRGSQKRAHAESSQAMSPSKKQCGAGRKAGKAKSAP 200
Query: 144 ---TQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKIL 198
T+D +A + RRE++S+R L +VP K+D ++L AI Y+K LQ +VK+L
Sbjct: 201 TTPTKDPQSLAAKNRRERISERLRILQELVPNGTKVDLVTMLEKAISYVKFLQLQVKVL 259
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKM-DKASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+SQR L +VPG K+ KA +L + I Y++ LQ +V+ L
Sbjct: 285 TDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFL 340
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 43/134 (32%), Positives = 62/134 (46%)
Query: 79 FNPNNVSSINMNQMGI---LKPKQETGAGYPSDILPSQVSFGNN-QNYVFKASQGAKRIS 134
+NP + ++ N M I LK + G+G S L SQ G Q + G K
Sbjct: 559 YNPTGDTQLSRN-MSIDKCLKGSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGD 617
Query: 135 PGAGN---------RLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDA 184
A R T H +AER RREK+++R L +VPG K+ KA +L +
Sbjct: 618 ADASREEYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEI 677
Query: 185 IKYLKQLQEKVKIL 198
I Y++ LQ +V+ L
Sbjct: 678 INYVQSLQRQVEFL 691
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 113 (44.8 bits), Expect = 0.00058, P = 0.00058
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 128 QGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIK 186
QG + + S + H +AER+RREK+++R L ++P K K S+L D I+
Sbjct: 135 QGTEEARGSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIE 194
Query: 187 YLKQLQEKV 195
Y+K L+ ++
Sbjct: 195 YVKSLEMQI 203
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 140 RLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE 199
R+S+ +A R RRE++S+R L +VPG KMD A++L +A YLK L+ +++ LE
Sbjct: 302 RISS-DPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALE 360
Query: 200 EQAN 203
N
Sbjct: 361 TLGN 364
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 27/56 (48%), Positives = 37/56 (66%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKM---DKASVLGDAIKYLKQLQEKVK 196
T H IAER RRE++++R AL +VP K+ DKAS+L + I Y+K LQ +VK
Sbjct: 258 TDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQLQVK 313
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 102 (41.0 bits), Expect = 0.00067, P = 0.00067
Identities = 43/142 (30%), Positives = 64/142 (45%)
Query: 69 TSTWNSSETGFNPNNVSSINMNQMGILKPKQETGAGYPSDILPSQVSFGNNQNYV----- 123
+S W S + N+S + Q +P Q G G L Q S + +
Sbjct: 3 SSGWEESSL-MSDTNISGVK-RQRDSSEPSQNGGGGGG---LAHQFSLPKTSSEMAAIEK 57
Query: 124 FKASQGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGL-KKMDKASVLG 182
F Q A A R T IAER RR ++S+R L +VP + K+ + A +L
Sbjct: 58 FLQFQDAVPCKIRA-KRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLD 116
Query: 183 DAIKYLKQLQEKVKILEE-QAN 203
A+ Y+K LQ++VK L + +AN
Sbjct: 117 LAVDYIKDLQKQVKGLNDSRAN 138
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 140 RLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKYLKQLQEKVKILE 199
R+S+ +A R RRE++S R L +VPG KMD AS+L +A YLK L+ +V+ LE
Sbjct: 280 RISS-DPQTVAARLRRERVSDRLRVLQKLVPGGNKMDTASMLDEAASYLKFLKSQVQKLE 338
>TAIR|locus:2040287 [details] [associations]
symbol:BHLH100 "basic helix-loop-helix protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010106 "cellular response to iron
ion starvation" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0055072 "iron ion homeostasis"
evidence=IGI] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005662 GO:GO:0055072 HSSP:P61244 EMBL:AY074635 EMBL:AF488626
IPI:IPI00522524 IPI:IPI00548751 PIR:E84839 RefSeq:NP_181657.1
RefSeq:NP_850349.1 UniGene:At.37027 ProteinModelPortal:Q9ZVB5
SMR:Q9ZVB5 EnsemblPlants:AT2G41240.1 GeneID:818723
KEGG:ath:AT2G41240 TAIR:At2g41240 eggNOG:NOG256140
HOGENOM:HOG000238662 InParanoid:Q9ZVB5 OMA:HNASERE PhylomeDB:Q9ZVB5
ProtClustDB:CLSN2683761 Genevestigator:Q9ZVB5 Uniprot:Q9ZVB5
Length = 242
Score = 110 (43.8 bits), Expect = 0.00075, P = 0.00074
Identities = 32/140 (22%), Positives = 74/140 (52%)
Query: 146 DHIIAERKRREKLSQRFIALSAIVPGL---KKMDKASVLGDAIKYLKQLQEKVKILEEQA 202
+H +ER+RR+K++ F +L + +P KK+ ++ + A+KY+ +LQE+VK L ++
Sbjct: 65 NHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKKK 124
Query: 203 NKKTIE-----SVVFVNKTQLSDEGDNPNGAFNEALPEIEARFCDKSVLIRVHC-EKRKG 256
+ + + +V+ ++ S+EG + A R + V++++ + K
Sbjct: 125 EELSFQISGQRDLVYTDQNSKSEEG-----VTSYASTVSSTRLSETEVMVQISSLQTEKC 179
Query: 257 VFEKIVAEIEKLHLTVINSS 276
F +++ +E+ L ++ +S
Sbjct: 180 SFGNVLSGVEEDGLVLVGAS 199
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S+R L +VPG K+ KA +L + I Y++ LQ +V+ L
Sbjct: 256 TNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 311
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 114 (45.2 bits), Expect = 0.00083, P = 0.00083
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 112 SQVSFGNNQNYVFKASQGAKR---ISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAI 168
S V+ G + K + G+ + I A R T H +AER RREK+S+R L +
Sbjct: 234 SSVASGKSSGKQIKDNAGSPKEDYIHVRA-RRGQATNSHSLAERVRREKISERMKYLQDL 292
Query: 169 VPGLKKMD-KASVLGDAIKYLKQLQEKVKIL 198
VPG K+ KA +L + I Y++ LQ +V+ L
Sbjct: 293 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 323
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 114 (45.2 bits), Expect = 0.00089, P = 0.00089
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 144 TQDHIIAERKRREKLSQRFIALSAIVPGLKKMD-KASVLGDAIKYLKQLQEKVKIL 198
T H +AER RREK+S+R L +VPG K+ KA +L + I Y++ LQ +V+ L
Sbjct: 266 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFL 321
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 111 (44.1 bits), Expect = 0.00090, P = 0.00090
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 128 QGAKRISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAIKY 187
QG++ R +N + A + RRE++S+R AL +VP K+D ++L AI Y
Sbjct: 181 QGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELVPSGGKVDMVTMLDRAISY 240
Query: 188 LKQLQEKVKILEEQA 202
+K +Q ++++LE A
Sbjct: 241 VKFMQMQLRVLETDA 255
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 117 GNNQNYVFKASQGAK-RISPGAGNRLSNTQDHIIAERKRREKLSQRFIALSAIVPGLKKM 175
G N K S G +I P A + Q +A + RRE++S+R L +VP K+
Sbjct: 183 GENTQLSKKPSSGTNGKIKPKATTSPKDPQS--LAAKNRRERISERLKVLQELVPNGTKV 240
Query: 176 DKASVLGDAIKYLKQLQEKVKIL 198
D ++L AI Y+K LQ +VK+L
Sbjct: 241 DLVTMLEKAIGYVKFLQVQVKVL 263
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 113 (44.8 bits), Expect = 0.00098, P = 0.00098
Identities = 22/72 (30%), Positives = 44/72 (61%)
Query: 127 SQGAKRISPGAGNRLSNTQD-HIIAERKRREKLSQRFIALSAIVPGLKKMDKASVLGDAI 185
+QG + ++ S H ++ER+RR+K+++ AL ++P K D++S+L D I
Sbjct: 261 NQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSSMLDDVI 320
Query: 186 KYLKQLQEKVKI 197
+Y+K LQ ++++
Sbjct: 321 EYVKSLQSQIQM 332
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.364 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 316 316 0.00082 116 3 11 23 0.43 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 143
No. of states in DFA: 609 (65 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.87u 0.17s 32.04t Elapsed: 00:00:01
Total cpu time: 31.89u 0.17s 32.06t Elapsed: 00:00:01
Start: Sat May 11 07:02:32 2013 End: Sat May 11 07:02:33 2013
WARNINGS ISSUED: 1