BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 021210
(316 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479858|ref|XP_002271564.2| PREDICTED: ribosome biogenesis GTPase A-like [Vitis vinifera]
gi|296086696|emb|CBI32331.3| unnamed protein product [Vitis vinifera]
Length = 367
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 234/312 (75%), Positives = 262/312 (83%), Gaps = 7/312 (2%)
Query: 5 VQLSSLWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQSSWHG 64
V L +W+P+PT++ + S+ KPSTT+LA++ L+SS + IQ VGGK +
Sbjct: 3 VALCGVWMPNPTLSGNVL--PSQIKPSTTALAATPHLASSST-----IQIVGGKSHGQYV 55
Query: 65 GNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVV 124
+SN + E EE W +LDADLY+WTK LRP+QWYPGHIAKTEKELK+QLKLMDVV
Sbjct: 56 NGGVSSNRTFEDISEESYWTNLDADLYHWTKKLRPIQWYPGHIAKTEKELKEQLKLMDVV 115
Query: 125 IEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNG 184
IEV+DARIPLST+HP M+ WLGNRKRILVLNREDMIS DRNAWATY+A QG KV+FSNG
Sbjct: 116 IEVQDARIPLSTSHPQMESWLGNRKRILVLNREDMISTEDRNAWATYYAMQGIKVVFSNG 175
Query: 185 QLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 244
QLGMG+MKLSRLAK LAS VNVKRR+KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCP
Sbjct: 176 QLGMGSMKLSRLAKTLASGVNVKRRAKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCP 235
Query: 245 AAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAA 304
AAPRPGVTR LKWV+FGKDLE LDSPGIIPMRISDQ+AAIKLAICDDIGERSYDVADVAA
Sbjct: 236 AAPRPGVTRQLKWVQFGKDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVADVAA 295
Query: 305 ILVQMLARIPTV 316
ILVQML RIP V
Sbjct: 296 ILVQMLTRIPAV 307
>gi|118485967|gb|ABK94828.1| unknown [Populus trichocarpa]
Length = 367
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/316 (74%), Positives = 258/316 (81%), Gaps = 15/316 (4%)
Query: 5 VQLSSLWLPSPTVTV---PFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQS- 60
V++ LWLP+P + PF+H + P+ SL + ASLSS P IQ VGGK +
Sbjct: 3 VEVLGLWLPNPAIRFNRPPFLHL---SPPTRASLVTPASLSSP----PPTIQIVGGKSTP 55
Query: 61 SWHGGNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKL 120
SW G ++ G EE DW D + DLY+WTK LRPVQWYPGHIAKTEKELK+QLKL
Sbjct: 56 SWQGSGNDVCGGG----GEETDWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKL 111
Query: 121 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 180
MDVVIEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS ADRNAWATYFA+QG KV+
Sbjct: 112 MDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVV 171
Query: 181 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 240
SNGQLGMGTMKLSR AK+LA+ VNVKRR KGLLPR VRAGIVGYPNVGKSSLINRLLKR
Sbjct: 172 LSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKR 231
Query: 241 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 300
RMCPAAPRPGVTR L+WVRFG DLE LDSPGIIPMRISDQ+AAIKLAICDDIGERSYDV
Sbjct: 232 RMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVT 291
Query: 301 DVAAILVQMLARIPTV 316
DVAAILVQ+L ++PTV
Sbjct: 292 DVAAILVQILTKLPTV 307
>gi|224085461|ref|XP_002307583.1| predicted protein [Populus trichocarpa]
gi|222857032|gb|EEE94579.1| predicted protein [Populus trichocarpa]
Length = 387
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 235/316 (74%), Positives = 258/316 (81%), Gaps = 15/316 (4%)
Query: 5 VQLSSLWLPSPTVTV---PFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQS- 60
V++ LWLP+P + PF+H + P+ SL + ASLSS P IQ VGGK +
Sbjct: 3 VEVLGLWLPNPAIRFNRPPFLHL---SPPTRASLVTPASLSSP----PPTIQIVGGKSTP 55
Query: 61 SWHGGNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKL 120
SW G ++ G EE DW D + DLY+WTK LRPVQWYPGHIAKTEKELK+QLKL
Sbjct: 56 SWQGSGNDVCGGG----GEETDWYDFETDLYHWTKPLRPVQWYPGHIAKTEKELKEQLKL 111
Query: 121 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 180
MDVVIEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS ADRNAWATYFA+QG KV+
Sbjct: 112 MDVVIEVRDARIPLSTTHPQMDAWLGNRKRILVLNREDMISKADRNAWATYFARQGIKVV 171
Query: 181 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 240
SNGQLGMGTMKLSR AK+LA+ VNVKRR KGLLPR VRAGIVGYPNVGKSSLINRLLKR
Sbjct: 172 LSNGQLGMGTMKLSRFAKSLAASVNVKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKR 231
Query: 241 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 300
RMCPAAPRPGVTR L+WVRFG DLE LDSPGIIPMRISDQ+AAIKLAICDDIGERSYDV
Sbjct: 232 RMCPAAPRPGVTRELRWVRFGNDLELLDSPGIIPMRISDQSAAIKLAICDDIGERSYDVT 291
Query: 301 DVAAILVQMLARIPTV 316
DVAAILVQ+L ++PTV
Sbjct: 292 DVAAILVQILTKLPTV 307
>gi|449464824|ref|XP_004150129.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
gi|449507918|ref|XP_004163166.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
Length = 370
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/317 (73%), Positives = 258/317 (81%), Gaps = 9/317 (2%)
Query: 1 MAVQVQLSSLWLPSPTVTVP-FVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQ 59
M++ + S +LP+ P C+S PS SLA SAS+SS P IQ VGGK
Sbjct: 1 MSLHIHPSGFFLPNTRTIYPQLFFCRSG--PSPPSLAPSASVSSP----HPTIQIVGGKT 54
Query: 60 SSWHGGNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLK 119
S++ G ++ + E E DW D +ADLYYWT +LRPVQWYPGHIAKTEKELKDQLK
Sbjct: 55 SNFLGDSTPKGASNNELLE--GDWVDFEADLYYWTNALRPVQWYPGHIAKTEKELKDQLK 112
Query: 120 LMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKV 179
LMDVVIEVRDARIP+ST+HP MD WLGNR+RILVLNREDMIS ADRNAWATYF +QG KV
Sbjct: 113 LMDVVIEVRDARIPMSTSHPQMDAWLGNRRRILVLNREDMISSADRNAWATYFTRQGIKV 172
Query: 180 IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLK 239
+FSNGQ GMGTMKL RLAK LA+DVNVKRR+KGLLPRAVRAGIVGYPNVGKSSLINRLLK
Sbjct: 173 VFSNGQHGMGTMKLGRLAKTLAADVNVKRRAKGLLPRAVRAGIVGYPNVGKSSLINRLLK 232
Query: 240 RRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDV 299
RRMCPAAPRPGVTR LKWVRFG DLE LDSPGIIPMRISDQ AAIKLAICDDIGERSY+
Sbjct: 233 RRMCPAAPRPGVTRELKWVRFGNDLELLDSPGIIPMRISDQTAAIKLAICDDIGERSYNA 292
Query: 300 ADVAAILVQMLARIPTV 316
ADVAAILVQ+L ++P+V
Sbjct: 293 ADVAAILVQILTKLPSV 309
>gi|363807764|ref|NP_001242175.1| uncharacterized protein LOC100784201 [Glycine max]
gi|255634965|gb|ACU17841.1| unknown [Glycine max]
Length = 391
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/318 (72%), Positives = 260/318 (81%), Gaps = 16/318 (5%)
Query: 3 VQVQLSSLWLP-SPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQSS 61
+ VQLSSLW+P SP + FV P+ ++SA LSS +P IQ +G S
Sbjct: 1 MSVQLSSLWVPNSPPIPQHFV-------PNRGRFSASA-----LSSQSPTIQIIGVGGPS 48
Query: 62 WHGGNSNNSNGS--IEAYEEECD-WADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQL 118
W N N + + + E D W++LD DLY+WTK+LRPVQW+PGHIAK EKELK+QL
Sbjct: 49 WRENGYGNPNNNNLFDGCQGESDHWSELDTDLYHWTKALRPVQWFPGHIAKAEKELKEQL 108
Query: 119 KLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTK 178
KLMDVVIEVRD RIP+ST+HP MD WLGNRKRILVLNREDMIS ADRNAWA YF + GTK
Sbjct: 109 KLMDVVIEVRDGRIPMSTSHPQMDPWLGNRKRILVLNREDMISTADRNAWADYFTRNGTK 168
Query: 179 VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLL 238
V+FSNGQLGMGTMKL RLAK LA+DVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLL
Sbjct: 169 VVFSNGQLGMGTMKLGRLAKELAADVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLL 228
Query: 239 KRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYD 298
KRRMCPAAPRPGVTR L+WVRFGKDLE LDSPGI+PMRISDQ+AAIKLAICDDIGERSYD
Sbjct: 229 KRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYD 288
Query: 299 VADVAAILVQMLARIPTV 316
VADVAAILVQML+++PTV
Sbjct: 289 VADVAAILVQMLSKLPTV 306
>gi|17644179|gb|AAL38787.1| unknown protein [Arabidopsis thaliana]
Length = 372
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/312 (69%), Positives = 250/312 (80%), Gaps = 4/312 (1%)
Query: 6 QLSSLWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQSSWHGG 65
QL+ PSP FVH ++ + + A SASL ++ SS P IQ VGGK +
Sbjct: 4 QLAPSPSPSPANVSHFVHHRTFRQ---CTYAVSASLPTANSSRPPPIQIVGGKDLNLDVT 60
Query: 66 NSNNSNG-SIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVV 124
++S G +EA E+E DW +L++D+ WT++LRPVQWYPGHI KTEKEL++QLKLMDVV
Sbjct: 61 RKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLMDVV 120
Query: 125 IEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNG 184
IEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS DRN WA YFAKQG KVIF+NG
Sbjct: 121 IEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIFTNG 180
Query: 185 QLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 244
+LGMG MKL RLAK+LA DVN KRR KGLLPR+VRAGI+GYPNVGKSSLINRLLKR++C
Sbjct: 181 KLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKICA 240
Query: 245 AAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAA 304
AAPRPGVTR +KWV+ GKDL+ LDSPG++PMRI DQAAAIKLAICDDIGE++YD DVA
Sbjct: 241 AAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAG 300
Query: 305 ILVQMLARIPTV 316
ILVQMLARIP V
Sbjct: 301 ILVQMLARIPEV 312
>gi|22328255|ref|NP_192188.2| GTP-binding protein [Arabidopsis thaliana]
gi|23297397|gb|AAN12960.1| unknown protein [Arabidopsis thaliana]
gi|332656830|gb|AEE82230.1| GTP-binding protein [Arabidopsis thaliana]
Length = 372
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/312 (69%), Positives = 250/312 (80%), Gaps = 4/312 (1%)
Query: 6 QLSSLWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQSSWHGG 65
QL+ PSP FVH ++ + + A SASL ++ SS P IQ VGGK +
Sbjct: 4 QLAPSPSPSPANVSHFVHRRTFRQ---CTYAVSASLPTANSSRPPPIQIVGGKDLNLDVT 60
Query: 66 NSNNSNG-SIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVV 124
++S G +EA E+E DW +L++D+ WT++LRPVQWYPGHI KTEKEL++QLKLMDVV
Sbjct: 61 RKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLMDVV 120
Query: 125 IEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNG 184
IEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS DRN WA YFAKQG KVIF+NG
Sbjct: 121 IEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIFTNG 180
Query: 185 QLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 244
+LGMG MKL RLAK+LA DVN KRR KGLLPR+VRAGI+GYPNVGKSSLINRLLKR++C
Sbjct: 181 KLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKICA 240
Query: 245 AAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAA 304
AAPRPGVTR +KWV+ GKDL+ LDSPG++PMRI DQAAAIKLAICDDIGE++YD DVA
Sbjct: 241 AAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAG 300
Query: 305 ILVQMLARIPTV 316
ILVQMLARIP V
Sbjct: 301 ILVQMLARIPEV 312
>gi|297814025|ref|XP_002874896.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
gi|297320733|gb|EFH51155.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/312 (69%), Positives = 250/312 (80%), Gaps = 4/312 (1%)
Query: 6 QLSSLWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQSSWHGG 65
QL+ PSP FVH ++ + + A SASL ++ SS P IQ VGGK +
Sbjct: 4 QLAPSPSPSPANLSHFVHRRTFRQ---CTYAVSASLPTANSSRPPPIQIVGGKDLNLDVT 60
Query: 66 NSNNSNG-SIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVV 124
++S G +EA E+E DW +L++D+ WT++LRPVQWYPGHI KTEKEL++QLKLMDVV
Sbjct: 61 RKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLMDVV 120
Query: 125 IEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNG 184
IEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS DRN WA YFAKQG KVIF+NG
Sbjct: 121 IEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIFTNG 180
Query: 185 QLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 244
+LGMG MKL RLAK+LA DVN KRR KGLLPR+VRAGI+GYPNVGKSSLINRLLKR++C
Sbjct: 181 KLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIGYPNVGKSSLINRLLKRKICA 240
Query: 245 AAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAA 304
AAPRPGVTR +KWV+ GKDL+ LDSPG++PMRI DQAAAIKLAICDDIGE++YD DVA
Sbjct: 241 AAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTDVAG 300
Query: 305 ILVQMLARIPTV 316
ILVQMLARIP V
Sbjct: 301 ILVQMLARIPEV 312
>gi|255559442|ref|XP_002520741.1| Nucleolar GTP-binding protein, putative [Ricinus communis]
gi|223540126|gb|EEF41703.1| Nucleolar GTP-binding protein, putative [Ricinus communis]
Length = 366
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/312 (70%), Positives = 241/312 (77%), Gaps = 29/312 (9%)
Query: 5 VQLSSLWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGGKQSSWHG 64
VQ+ LW P+ TV V P T S S+ + +GGK + +G
Sbjct: 3 VQILGLWSPNYTVCVHL--------PETRS-----------SNRVHSVVNIGGKTPTLYG 43
Query: 65 GNSNNSNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVV 124
A +E DW L+ DLYYWTK LRPVQWYPGHIAKTEKELK+QLKLMDVV
Sbjct: 44 ----------NATLDETDWVGLETDLYYWTKPLRPVQWYPGHIAKTEKELKEQLKLMDVV 93
Query: 125 IEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNG 184
IEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS ADRNAWA YFA QG K +F+NG
Sbjct: 94 IEVRDARIPLSTTHPQMDSWLGNRKRILVLNREDMISKADRNAWANYFATQGIKAVFANG 153
Query: 185 QLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCP 244
Q GMGT+KLSRLAKALA+ VNVKRR+KGLLPR VRAG+VGYPNVGKSSLINRLLKRRMC
Sbjct: 154 QFGMGTVKLSRLAKALAASVNVKRRAKGLLPRPVRAGVVGYPNVGKSSLINRLLKRRMCE 213
Query: 245 AAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAA 304
AA RPGVTR LKWVRFG +LE LDSPG++PMRI+DQ+AAIKLAICDDIGERSYDVADVAA
Sbjct: 214 AASRPGVTRELKWVRFGNELELLDSPGMLPMRINDQSAAIKLAICDDIGERSYDVADVAA 273
Query: 305 ILVQMLARIPTV 316
ILVQML RIP+V
Sbjct: 274 ILVQMLTRIPSV 285
>gi|218196848|gb|EEC79275.1| hypothetical protein OsI_20063 [Oryza sativa Indica Group]
Length = 371
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/242 (83%), Positives = 220/242 (90%)
Query: 75 EAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPL 134
E Y++E W +LDADL YWT+SLRPVQWYPGHIAKTEKELK+QLKLMDVVIEVRDARIPL
Sbjct: 70 EDYDKEMFWENLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPL 129
Query: 135 STTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLS 194
+T+HP MD WLGNRKRI+V+NREDM+S DRNAWA+YFA QGTKV++SNGQLGMGTMKL
Sbjct: 130 ATSHPKMDAWLGNRKRIIVMNREDMVSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLG 189
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
R+AK+LAS VN KRR KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR
Sbjct: 190 RMAKSLASTVNTKRREKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRE 249
Query: 255 LKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
LKWVRFG DLE LDSPGI+PMRISDQ AAIKLAICDDIGERSYD ADVAAILVQ+L R P
Sbjct: 250 LKWVRFGSDLELLDSPGILPMRISDQTAAIKLAICDDIGERSYDFADVAAILVQLLVRHP 309
Query: 315 TV 316
V
Sbjct: 310 AV 311
>gi|115464049|ref|NP_001055624.1| Os05g0430400 [Oryza sativa Japonica Group]
gi|55733919|gb|AAV59426.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579175|dbj|BAF17538.1| Os05g0430400 [Oryza sativa Japonica Group]
gi|215693391|dbj|BAG88773.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222631679|gb|EEE63811.1| hypothetical protein OsJ_18635 [Oryza sativa Japonica Group]
Length = 371
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/242 (83%), Positives = 220/242 (90%)
Query: 75 EAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPL 134
E Y++E W +LDADL YWT+SLRPVQWYPGHIAKTEKELK+QLKLMDVVIEVRDARIPL
Sbjct: 70 EDYDKEMFWDNLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPL 129
Query: 135 STTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLS 194
+T+HP MD WLGNRKRI+V+NREDM+S DRNAWA+YFA QGTKV++SNGQLGMGTMKL
Sbjct: 130 ATSHPKMDAWLGNRKRIIVMNREDMVSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLG 189
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
R+AK+LAS VN KRR KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR
Sbjct: 190 RMAKSLASTVNTKRREKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRE 249
Query: 255 LKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
LKWVRFG DLE LDSPGI+PMRISDQ AAIKLAICDDIGERSYD ADVAAILVQ+L R P
Sbjct: 250 LKWVRFGSDLELLDSPGILPMRISDQTAAIKLAICDDIGERSYDFADVAAILVQLLVRHP 309
Query: 315 TV 316
V
Sbjct: 310 AV 311
>gi|4263509|gb|AAD15335.1| hypothetical protein [Arabidopsis thaliana]
gi|7269764|emb|CAB77764.1| hypothetical protein [Arabidopsis thaliana]
Length = 375
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/315 (68%), Positives = 250/315 (79%), Gaps = 7/315 (2%)
Query: 6 QLSSLWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQT---VGGKQSSW 62
QL+ PSP FVH ++ + + A SASL ++ SS P IQ VGGK +
Sbjct: 4 QLAPSPSPSPANVSHFVHRRTFRQ---CTYAVSASLPTANSSRPPPIQANIIVGGKDLNL 60
Query: 63 HGGNSNNSNG-SIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLM 121
++S G +EA E+E DW +L++D+ WT++LRPVQWYPGHI KTEKEL++QLKLM
Sbjct: 61 DVTRKDDSIGFKLEANEDEIDWMNLESDIRLWTRALRPVQWYPGHIMKTEKELREQLKLM 120
Query: 122 DVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIF 181
DVVIEVRDARIPLSTTHP MD WLGNRKRILVLNREDMIS DRN WA YFAKQG KVIF
Sbjct: 121 DVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDMISNDDRNDWARYFAKQGIKVIF 180
Query: 182 SNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRR 241
+NG+LGMG MKL RLAK+LA DVN KRR KGLLPR+VRAGI+GYPNVGKSSLINRLLKR+
Sbjct: 181 TNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVRAGIIGYPNVGKSSLINRLLKRK 240
Query: 242 MCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVAD 301
+C AAPRPGVTR +KWV+ GKDL+ LDSPG++PMRI DQAAAIKLAICDDIGE++YD D
Sbjct: 241 ICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDDQAAAIKLAICDDIGEKAYDFTD 300
Query: 302 VAAILVQMLARIPTV 316
VA ILVQMLARIP V
Sbjct: 301 VAGILVQMLARIPEV 315
>gi|242090637|ref|XP_002441151.1| hypothetical protein SORBIDRAFT_09g021290 [Sorghum bicolor]
gi|241946436|gb|EES19581.1| hypothetical protein SORBIDRAFT_09g021290 [Sorghum bicolor]
Length = 375
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/245 (82%), Positives = 218/245 (88%)
Query: 70 SNGSIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRD 129
S + + + EE W LDADL YWT+SLRPVQWYPGHIAKTEKELK+QL+LMDVVIE+RD
Sbjct: 69 SQYATDEFNEERYWETLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLRLMDVVIEIRD 128
Query: 130 ARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMG 189
ARIPLST+HP MD WLGNRKRI+VLNREDMIS DRNAWATYFA QGTKV+FSNGQLGMG
Sbjct: 129 ARIPLSTSHPKMDSWLGNRKRIIVLNREDMISTEDRNAWATYFANQGTKVVFSNGQLGMG 188
Query: 190 TMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRP 249
TMKL R+AK++AS VN KR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRP
Sbjct: 189 TMKLGRMAKSVASVVNTKRKEKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRP 248
Query: 250 GVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQM 309
GVTR LKWVRFG DLE LDSPGI+PMRISDQ +A+KLAICDDIGERSYD ADVAAILVQM
Sbjct: 249 GVTRELKWVRFGTDLELLDSPGILPMRISDQTSALKLAICDDIGERSYDFADVAAILVQM 308
Query: 310 LARIP 314
L R P
Sbjct: 309 LIRHP 313
>gi|326533414|dbj|BAJ93679.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 372
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/242 (82%), Positives = 215/242 (88%)
Query: 75 EAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPL 134
E +E+ W LDADL YWT+SLRPVQWYPGHIAKTEKELK QLKLMDVVIEVRDARIPL
Sbjct: 71 EESKEDVFWETLDADLQYWTRSLRPVQWYPGHIAKTEKELKGQLKLMDVVIEVRDARIPL 130
Query: 135 STTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLS 194
+TTHP MD WLGNR+RI+V+NREDM+S DRNAWATYF+ QG KV++SNGQLGMGTMKL
Sbjct: 131 ATTHPKMDSWLGNRRRIIVMNREDMVSADDRNAWATYFSSQGIKVVYSNGQLGMGTMKLG 190
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
R+AK+ AS VN KRR KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR
Sbjct: 191 RMAKSAASTVNTKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRE 250
Query: 255 LKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
LKWVRFGKDLE LDSPGI+PMRISDQ AA+KLAICDDIGERSYD ADVAAILVQ+L R P
Sbjct: 251 LKWVRFGKDLELLDSPGILPMRISDQTAALKLAICDDIGERSYDFADVAAILVQILLRHP 310
Query: 315 TV 316
V
Sbjct: 311 AV 312
>gi|357129118|ref|XP_003566214.1| PREDICTED: LOW QUALITY PROTEIN: ribosome biogenesis GTPase A-like
[Brachypodium distachyon]
Length = 376
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/242 (81%), Positives = 215/242 (88%)
Query: 75 EAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPL 134
E +E+ W LDADL YWT+SLRPVQWYPGHIAKTEKELK QLKLMDVVIEVRDARIPL
Sbjct: 75 EESKEDIFWETLDADLQYWTRSLRPVQWYPGHIAKTEKELKGQLKLMDVVIEVRDARIPL 134
Query: 135 STTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLS 194
+TTHP MD WLGNR+RI+V+NREDM+S DRNAWATYF+ QG KV++SNGQLGMGTMKL
Sbjct: 135 ATTHPKMDSWLGNRRRIIVMNREDMVSAEDRNAWATYFSSQGIKVMYSNGQLGMGTMKLG 194
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
R+AK++AS VN KRR KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR
Sbjct: 195 RMAKSVASTVNTKRREKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRE 254
Query: 255 LKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
LKWVRFGKDLE LDSPGI+PMRISDQ AA+KLAICDDIGERSYD DVAAILVQ+L R P
Sbjct: 255 LKWVRFGKDLELLDSPGILPMRISDQTAALKLAICDDIGERSYDFDDVAAILVQLLLRHP 314
Query: 315 TV 316
V
Sbjct: 315 AV 316
>gi|413945546|gb|AFW78195.1| hypothetical protein ZEAMMB73_373816 [Zea mays]
Length = 362
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/239 (82%), Positives = 212/239 (88%)
Query: 78 EEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTT 137
+EE W LDADL YWT+SLRPVQWYPGHIAKTEKELK+QL+LMDVVIE+RDARIPLST+
Sbjct: 77 KEERYWETLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLRLMDVVIEIRDARIPLSTS 136
Query: 138 HPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLA 197
HP MD WLGNRKRI+VLNR+DMIS D NAWATYF QG KV+FSNGQLGMGTMKL R+A
Sbjct: 137 HPKMDSWLGNRKRIIVLNRKDMISTEDMNAWATYFGNQGIKVVFSNGQLGMGTMKLGRMA 196
Query: 198 KALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKW 257
K++AS N KR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR LKW
Sbjct: 197 KSVASVANTKRKEKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKW 256
Query: 258 VRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
VRFG DLE LDSPGI+PMRISDQ +AIKLAICDDIGERSYD ADVAAILVQML R P V
Sbjct: 257 VRFGTDLELLDSPGILPMRISDQTSAIKLAICDDIGERSYDFADVAAILVQMLIRHPAV 315
>gi|226529586|ref|NP_001142010.1| uncharacterized protein LOC100274162 [Zea mays]
gi|194706778|gb|ACF87473.1| unknown [Zea mays]
gi|413945545|gb|AFW78194.1| hypothetical protein ZEAMMB73_373816 [Zea mays]
Length = 375
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/239 (82%), Positives = 212/239 (88%)
Query: 78 EEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTT 137
+EE W LDADL YWT+SLRPVQWYPGHIAKTEKELK+QL+LMDVVIE+RDARIPLST+
Sbjct: 77 KEERYWETLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLRLMDVVIEIRDARIPLSTS 136
Query: 138 HPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLA 197
HP MD WLGNRKRI+VLNR+DMIS D NAWATYF QG KV+FSNGQLGMGTMKL R+A
Sbjct: 137 HPKMDSWLGNRKRIIVLNRKDMISTEDMNAWATYFGNQGIKVVFSNGQLGMGTMKLGRMA 196
Query: 198 KALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKW 257
K++AS N KR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR LKW
Sbjct: 197 KSVASVANTKRKEKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKW 256
Query: 258 VRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
VRFG DLE LDSPGI+PMRISDQ +AIKLAICDDIGERSYD ADVAAILVQML R P V
Sbjct: 257 VRFGTDLELLDSPGILPMRISDQTSAIKLAICDDIGERSYDFADVAAILVQMLIRHPAV 315
>gi|413945544|gb|AFW78193.1| hypothetical protein ZEAMMB73_373816 [Zea mays]
Length = 350
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/239 (82%), Positives = 212/239 (88%)
Query: 78 EEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTT 137
+EE W LDADL YWT+SLRPVQWYPGHIAKTEKELK+QL+LMDVVIE+RDARIPLST+
Sbjct: 77 KEERYWETLDADLRYWTRSLRPVQWYPGHIAKTEKELKEQLRLMDVVIEIRDARIPLSTS 136
Query: 138 HPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLA 197
HP MD WLGNRKRI+VLNR+DMIS D NAWATYF QG KV+FSNGQLGMGTMKL R+A
Sbjct: 137 HPKMDSWLGNRKRIIVLNRKDMISTEDMNAWATYFGNQGIKVVFSNGQLGMGTMKLGRMA 196
Query: 198 KALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKW 257
K++AS N KR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTR LKW
Sbjct: 197 KSVASVANTKRKEKGLLPRPVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKW 256
Query: 258 VRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
VRFG DLE LDSPGI+PMRISDQ +AIKLAICDDIGERSYD ADVAAILVQML R P V
Sbjct: 257 VRFGTDLELLDSPGILPMRISDQTSAIKLAICDDIGERSYDFADVAAILVQMLIRHPAV 315
>gi|413945543|gb|AFW78192.1| hypothetical protein ZEAMMB73_373816 [Zea mays]
Length = 256
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/196 (83%), Positives = 174/196 (88%)
Query: 121 MDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVI 180
MDVVIE+RDARIPLST+HP MD WLGNRKRI+VLNR+DMIS D NAWATYF QG KV+
Sbjct: 1 MDVVIEIRDARIPLSTSHPKMDSWLGNRKRIIVLNRKDMISTEDMNAWATYFGNQGIKVV 60
Query: 181 FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKR 240
FSNGQLGMGTMKL R+AK++AS N KR+ KGLLPR VRAGIVGYPNVGKSSLINRLLKR
Sbjct: 61 FSNGQLGMGTMKLGRMAKSVASVANTKRKEKGLLPRPVRAGIVGYPNVGKSSLINRLLKR 120
Query: 241 RMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVA 300
RMCPAAPRPGVTR LKWVRFG DLE LDSPGI+PMRISDQ +AIKLAICDDIGERSYD A
Sbjct: 121 RMCPAAPRPGVTRELKWVRFGTDLELLDSPGILPMRISDQTSAIKLAICDDIGERSYDFA 180
Query: 301 DVAAILVQMLARIPTV 316
DVAAILVQML R P V
Sbjct: 181 DVAAILVQMLIRHPAV 196
>gi|168046695|ref|XP_001775808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672815|gb|EDQ59347.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 295
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/233 (65%), Positives = 194/233 (83%)
Query: 83 WADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMD 142
W LD+D+ Y T+S R VQWYPGHIAK E+ LK+QLKLMDVVIEVRDARIP++T HP +D
Sbjct: 1 WEALDSDVDYLTRSARLVQWYPGHIAKAERALKEQLKLMDVVIEVRDARIPMATAHPEID 60
Query: 143 QWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALAS 202
+W+GN+++I+V+NREDM+S AD+ W YFAKQG V+F+NGQ G GTMKL+R+AK+ A
Sbjct: 61 EWMGNKQKIIVMNREDMVSNADKQVWGEYFAKQGISVLFANGQRGTGTMKLARMAKSAAD 120
Query: 203 DVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGK 262
D+N +R++KGLLPR VRA +VGYPNVGKSSLINRLLKR++C AAPRPGVT+ L+W R
Sbjct: 121 DINARRKAKGLLPRNVRAAVVGYPNVGKSSLINRLLKRKVCAAAPRPGVTKHLQWARVVD 180
Query: 263 DLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
L+ LD+PG++PMRI DQA A +LAIC+DIGE SY VA VAA+LV+M+ RIP+
Sbjct: 181 GLDLLDAPGVLPMRIQDQAGATRLAICNDIGENSYAVAGVAAVLVEMIKRIPS 233
>gi|302818624|ref|XP_002990985.1| hypothetical protein SELMODRAFT_132651 [Selaginella moellendorffii]
gi|300141316|gb|EFJ08029.1| hypothetical protein SELMODRAFT_132651 [Selaginella moellendorffii]
Length = 276
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 138/213 (64%), Positives = 176/213 (82%)
Query: 102 WYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMIS 161
WYPGHIAK E++LK+QL L+DVV+E+RDARIP +T HP +++W+ +KRILVLNREDMIS
Sbjct: 1 WYPGHIAKAERDLKEQLLLVDVVVELRDARIPSATGHPDLEKWIRGKKRILVLNREDMIS 60
Query: 162 MADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAG 221
ADRNAWA+YFA + VIF+NGQ G G MKL+R A ++AS +N KRR KGLLPR+VR
Sbjct: 61 TADRNAWASYFASKDMPVIFTNGQQGKGIMKLTRQAGSVASTINSKRRDKGLLPRSVRVA 120
Query: 222 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQA 281
+VG+PN+GKSS+INRLLKR++C AAPRPGVTR L+W L+ LDSPGI+PM+ DQA
Sbjct: 121 VVGFPNIGKSSIINRLLKRKICEAAPRPGVTRQLRWSTIHDGLDLLDSPGILPMKFDDQA 180
Query: 282 AAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
AA+KLAIC+DIG+ SY+V+ VAA+LV+ L R+P
Sbjct: 181 AAVKLAICNDIGQESYEVSGVAAVLVERLKRLP 213
>gi|302802247|ref|XP_002982879.1| hypothetical protein SELMODRAFT_117255 [Selaginella moellendorffii]
gi|300149469|gb|EFJ16124.1| hypothetical protein SELMODRAFT_117255 [Selaginella moellendorffii]
Length = 276
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 175/213 (82%)
Query: 102 WYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMIS 161
WYPGHIAK E++LK+QL L+DVV+E+RDARIP +T HP +++W+ +KRILVLNREDMIS
Sbjct: 1 WYPGHIAKAERDLKEQLLLVDVVVELRDARIPSATGHPDLEKWIRGKKRILVLNREDMIS 60
Query: 162 MADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAG 221
ADRNAWA+YFA + VIF+NGQ G G MKL+R A ++ S +N KRR KGLLPR+VR
Sbjct: 61 TADRNAWASYFASKDMPVIFTNGQQGKGIMKLTRQAGSVGSTINSKRRDKGLLPRSVRVA 120
Query: 222 IVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQA 281
+VG+PN+GKSS+INRLLKR++C AAPRPGVTR L+W L+ LDSPGI+PM+ DQA
Sbjct: 121 VVGFPNIGKSSIINRLLKRKICEAAPRPGVTRQLRWSTIHDGLDLLDSPGILPMKFDDQA 180
Query: 282 AAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
AA+KLAIC+DIG+ SY+V+ VAA+LV+ L R+P
Sbjct: 181 AAVKLAICNDIGQESYEVSGVAAVLVERLKRLP 213
>gi|354565742|ref|ZP_08984916.1| ribosome biogenesis GTP-binding protein YlqF [Fischerella sp.
JSC-11]
gi|353548615|gb|EHC18060.1| ribosome biogenesis GTP-binding protein YlqF [Fischerella sp.
JSC-11]
Length = 293
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 163/214 (76%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QLKL+DVV+EVRDARIPLST HP + QW+GN+KR+LVLNR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLKLVDVVLEVRDARIPLSTFHPQIPQWIGNKKRLLVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R WA +F +QG +V F+N Q G G +S+ +A ++N +RR +G+LPR VR
Sbjct: 72 ISEQVRQLWADWFKRQGEQVFFTNAQQGQGVTAVSKATQATGVELNQRRRDRGMLPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+ RR+ +A RPGVTR L+WVR +DLE LD+PG+IP ++ D
Sbjct: 132 AVVIGFPNVGKSALINRLVGRRVVESAARPGVTRQLRWVRISEDLELLDAPGVIPAKLED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A +KLA+CDDIGE +YD +AA V ++ +
Sbjct: 192 QEAGLKLAVCDDIGEAAYDNQLIAAAFVDLVNEL 225
>gi|428226923|ref|YP_007111020.1| Ras superfamily GTP-binding protein YlqF [Geitlerinema sp. PCC
7407]
gi|427986824|gb|AFY67968.1| Ras superfamily GTP-binding protein YlqF [Geitlerinema sp. PCC
7407]
Length = 291
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/215 (56%), Positives = 161/215 (74%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK L +QLK +DVV+EVRDARIPLST HP + QW+G++ R+LVLNRED
Sbjct: 5 PIQWYPGHIAKAEKALTEQLKRVDVVLEVRDARIPLSTHHPQVPQWVGSKGRVLVLNRED 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
MI + AW +F G F+N Q G G +S+ + + + VN +RR +G+LPR +
Sbjct: 65 MIPPVAQQAWTDWFTAAGEVPCFTNAQQGKGIQAVSQAVQEVGAHVNERRRDRGMLPRPI 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRLLK+R+ +A RPGVTR L+WVR +E LD+PG++P R++
Sbjct: 125 RAVVIGFPNVGKSALINRLLKKRVVESARRPGVTRQLRWVRISDQIELLDAPGVLPSRLN 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
DQAAA+KLAICDDIGE SYD VAA L++ML +
Sbjct: 185 DQAAALKLAICDDIGEASYDNQRVAAALIEMLKEL 219
>gi|427718535|ref|YP_007066529.1| ribosome biogenesis GTP-binding protein YlqF [Calothrix sp. PCC
7507]
gi|427350971|gb|AFY33695.1| ribosome biogenesis GTP-binding protein YlqF [Calothrix sp. PCC
7507]
Length = 292
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 164/221 (74%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
L +QWYPGHIAK EK LK+QLK +DVV+EVRDARIPL+T HP +++W+G++ R+LVLN
Sbjct: 8 KLNVIQWYPGHIAKAEKNLKEQLKRVDVVLEVRDARIPLATHHPQIEEWVGSKARVLVLN 67
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
R DMI+ R+ W +F QG F+N Q G G ++ + A+A ++N +RR +G+LP
Sbjct: 68 RVDMITPQMRSLWINWFKFQGETAYFTNAQHGQGVTEVCKAAQAAGLELNQRRRDRGMLP 127
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R VRA ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR + LE LD+PG+IP+
Sbjct: 128 RPVRAVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISEQLELLDAPGVIPL 187
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
++ DQ AA+KLAICDDIGE +YD VAA LV +L + V
Sbjct: 188 KLEDQGAALKLAICDDIGEAAYDNQLVAAELVDILNHLQDV 228
>gi|411116865|ref|ZP_11389352.1| ribosome biogenesis GTP-binding protein YlqF [Oscillatoriales
cyanobacterium JSC-12]
gi|410712968|gb|EKQ70469.1| ribosome biogenesis GTP-binding protein YlqF [Oscillatoriales
cyanobacterium JSC-12]
Length = 285
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 117/215 (54%), Positives = 160/215 (74%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK L++QLK +DVV+EVRDARIPL+T HP + QW+G ++R+LVLNR D
Sbjct: 5 PIQWYPGHIAKAEKALQEQLKRVDVVLEVRDARIPLATAHPQVKQWIGEKERVLVLNRVD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
MI R W +F QG + F++ Q G G +++ A+A +N +RR +G+LPR V
Sbjct: 65 MIPAQARQQWVEWFKAQGEEPFFTDAQHGKGIEAITKAAQAAGEKMNQRRRDRGMLPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRLLKRR+ +A R GVTR L+W+R +E LD+PG++P +++
Sbjct: 125 RAVVMGFPNVGKSALINRLLKRRVVDSARRAGVTRSLRWIRISDQIELLDAPGVLPSKLN 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
DQ AA+KLAICDDIGE +YD VAA LV +L ++
Sbjct: 185 DQDAALKLAICDDIGEAAYDNQRVAAALVDLLKQL 219
>gi|388504316|gb|AFK40224.1| unknown [Lotus japonicus]
Length = 223
Score = 257 bits (657), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 163/216 (75%), Gaps = 12/216 (5%)
Query: 1 MAVQVQLSS---LWLPSPTVTVPFVHCKSKTKPSTTSLASSASLSSSLSSSAPIIQTVGG 57
MA+ VQLSS LW+P+ VP S+ KP + S + A+ +LSS P IQ VG
Sbjct: 1 MAMSVQLSSSSGLWVPNSPHRVP-----SRGKPGSPS--ALAATPPTLSSQPPTIQIVGL 53
Query: 58 KQSSW-HGGNSNNSNGSIEAYEEECD-WADLDADLYYWTKSLRPVQWYPGHIAKTEKELK 115
+ SW G +N ++ + + E E + W++LD DLY+WTK+LRPVQW+PGHIAK EKELK
Sbjct: 54 RGPSWSENGIANPNSNTFDGCEGENNLWSELDTDLYHWTKALRPVQWFPGHIAKAEKELK 113
Query: 116 DQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQ 175
+QL+LMDVVIEVRD RIP+STTHP MD WLGNRKRILVLNREDMIS DRNAWA YF +
Sbjct: 114 EQLRLMDVVIEVRDGRIPMSTTHPQMDLWLGNRKRILVLNREDMISTEDRNAWAEYFTRN 173
Query: 176 GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSK 211
GTKV+FSNGQLGMGTMKL RLAK LA++VNVKRR+K
Sbjct: 174 GTKVVFSNGQLGMGTMKLGRLAKELAANVNVKRRAK 209
>gi|428296853|ref|YP_007135159.1| Ras superfamily GTP-binding protein YlqF [Calothrix sp. PCC 6303]
gi|428233397|gb|AFY99186.1| Ras superfamily GTP-binding protein YlqF [Calothrix sp. PCC 6303]
Length = 293
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 162/220 (73%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK E++LK+QLKL+DVV+EVRDARIPL+T HP +++W+G +KR+LV+N+
Sbjct: 9 LNTIQWYPGHIAKAERKLKEQLKLVDVVLEVRDARIPLATQHPQLNEWIGTKKRVLVINK 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DM++ A RN W +F QG F+N Q G G L + A+A ++N +R ++G+L R
Sbjct: 69 VDMVTPAIRNVWIDWFKSQGETPYFTNSQQGNGIDALGKAAQAAGVELNQRRHNRGMLSR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VRA ++G+PNVGKS+LINRLLK+R+ +A RPGVTR L+WVR +E LD+PG+IP++
Sbjct: 129 PVRAVVIGFPNVGKSALINRLLKKRVVESANRPGVTRSLRWVRISDQIELLDAPGVIPLK 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
+ DQ AA+KLAICDDIG+ SYD VA+ + L V
Sbjct: 189 LEDQEAALKLAICDDIGDASYDNQLVASAFIDTLTYFEAV 228
>gi|434395207|ref|YP_007130154.1| Ras superfamily GTP-binding protein YlqF [Gloeocapsa sp. PCC 7428]
gi|428267048|gb|AFZ32994.1| Ras superfamily GTP-binding protein YlqF [Gloeocapsa sp. PCC 7428]
Length = 287
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 161/211 (76%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QL+L+DVV+EVRDARIPL+T HP + +W+GN+ R+LVLNR DM
Sbjct: 6 IQWYPGHIAKAEKALKEQLRLVDVVLEVRDARIPLATHHPQVKEWVGNKMRVLVLNRVDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + WA +F +QG + F+N Q G G + +++ A+A VN +RR +G+LPR VR
Sbjct: 66 IQPQAQRMWAQWFREQGEEPYFTNAQKGEGVIAIAKAAQAAGVAVNQRRRDRGMLPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ +A RPGVTR L+WVR LE LD+PG+IP +++D
Sbjct: 126 AVVIGFPNVGKSALINRLLKRKVVESAARPGVTRQLRWVRISDQLELLDAPGVIPAKLND 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA KLAICDDIG+ SYD VAA LV +L
Sbjct: 186 QQAAFKLAICDDIGDASYDNQRVAATLVDLL 216
>gi|282897399|ref|ZP_06305401.1| GTP-binding protein [Raphidiopsis brookii D9]
gi|281198051|gb|EFA72945.1| GTP-binding protein [Raphidiopsis brookii D9]
Length = 296
Score = 257 bits (656), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 118/214 (55%), Positives = 159/214 (74%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK EK LK+QLK +DVV+EVRDARIPLST HP + +W+GN+ R+LV+NR
Sbjct: 9 LNIIQWYPGHIAKAEKNLKEQLKRVDVVLEVRDARIPLSTHHPQVKEWIGNKSRVLVINR 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DMI ++ W+ + KQG F+N Q G G +++ A+ +++N +R+ +G+LPR
Sbjct: 69 LDMILPQVKSIWSEWLKKQGEVPYFANAQQGQGITAIAKAAQIAGTELNERRKQRGMLPR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VRA ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WV+ + LE LD+PGIIP R
Sbjct: 129 PVRAVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVKISEHLELLDAPGIIPSR 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ DQ AA+KLAICDDIGE SYD +AA V M+
Sbjct: 189 LEDQQAAVKLAICDDIGEASYDNQLIAAAFVDMV 222
>gi|145344505|ref|XP_001416772.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576998|gb|ABO95065.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 369
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 171/235 (72%), Gaps = 1/235 (0%)
Query: 82 DWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLM 141
D D +A S+R VQWYPGHIA+ E+ LK QLK +D V+EVRDAR+PL+T+HP +
Sbjct: 67 DAEDANARRIASAGSVRLVQWYPGHIARAERLLKAQLKGVDAVLEVRDARLPLATSHPEI 126
Query: 142 DQWLGNRKRILVLNREDMISMADRNAWATYFAKQG-TKVIFSNGQLGMGTMKLSRLAKAL 200
W G++ RI+VLNR DM+S +R W ++ ++G T+V+ ++ + G GT ++ +A +
Sbjct: 127 ASWCGDKMRIVVLNRADMVSDGERARWVSHLKREGETRVVLTDARAGKGTRRVKEMAMEM 186
Query: 201 ASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF 260
+ ++N KR +KGLLPR VRA +VGYPNVGKS+LINRL+ + C +APRPGVTR L+WVR
Sbjct: 187 SEEINAKRAAKGLLPRPVRAAVVGYPNVGKSALINRLVGKAACASAPRPGVTRDLRWVRI 246
Query: 261 GKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
G DL+ LD+PG++P R+ DQ AA +LA+ +DIGE SY + +AA +++ L R+PT
Sbjct: 247 GGDLDLLDAPGVLPARMHDQRAASRLAMANDIGEASYIASSMAAAMIEELKRLPT 301
>gi|282901743|ref|ZP_06309658.1| GTP-binding protein [Cylindrospermopsis raciborskii CS-505]
gi|281193360|gb|EFA68342.1| GTP-binding protein [Cylindrospermopsis raciborskii CS-505]
Length = 296
Score = 256 bits (655), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 159/214 (74%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK EK LK+QLK +DV++EVRDARIPLST HP + +W+GN+ R+LV+NR
Sbjct: 9 LNIIQWYPGHIAKAEKNLKEQLKRVDVILEVRDARIPLSTHHPQVKEWIGNKSRVLVINR 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DMI ++ W+ + KQG F+N Q G G +++ A+ +++N +R+ +G+LPR
Sbjct: 69 LDMILPQVKSIWSEWLKKQGEVPYFANAQQGQGITAIAKAAQIAGTELNERRKQRGMLPR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VRA ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WV+ + LE LD+PGIIP R
Sbjct: 129 PVRAVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVKISEHLELLDAPGIIPSR 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ DQ AA+KLAICDDIGE SYD +AA V M+
Sbjct: 189 LEDQQAAVKLAICDDIGEASYDNQLIAAAFVDMV 222
>gi|443310963|ref|ZP_21040600.1| ribosome biogenesis GTP-binding protein YlqF [Synechocystis sp. PCC
7509]
gi|442779023|gb|ELR89279.1| ribosome biogenesis GTP-binding protein YlqF [Synechocystis sp. PCC
7509]
Length = 288
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 162/215 (75%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK LK+QLKL+DVV+EVRD RIPL+T HP +W+G ++R+LVLNR D
Sbjct: 5 PIQWYPGHIAKAEKALKEQLKLVDVVLEVRDTRIPLATCHPQAQEWIGTKERVLVLNRLD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
MIS A + AW +F +QG + F++ Q G G +++ A+ ++N +R+ +G+LPR V
Sbjct: 65 MISPAAQQAWMRWFREQGEEPYFTDAQAGKGITAVAKAAQKAGIELNERRQLRGMLPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRLL RR+ +A R GVTR L+WVR LE LD+PGIIP++++
Sbjct: 125 RAVVIGFPNVGKSALINRLLNRRVVESAARAGVTRQLRWVRISDQLELLDAPGIIPIKLN 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+Q A KLAICDDIG+ SYD VA +L+++L ++
Sbjct: 185 NQVNAFKLAICDDIGDASYDNQRVATVLIELLQQL 219
>gi|428307397|ref|YP_007144222.1| Ras superfamily GTP-binding protein YlqF [Crinalium epipsammum PCC
9333]
gi|428248932|gb|AFZ14712.1| Ras superfamily GTP-binding protein YlqF [Crinalium epipsammum PCC
9333]
Length = 289
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/212 (57%), Positives = 156/212 (73%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E+ LK+QLK +DVV+EVRDARIPL+T HP + +W+ ++ ++LVLNR D
Sbjct: 5 PIQWYPGHIAKAERSLKEQLKRVDVVLEVRDARIPLATRHPQVQEWIASKTKVLVLNRVD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
MIS A R W +F + G K F+N Q G G + +S+ A +VN KR +GLLPR V
Sbjct: 65 MISPAVRQLWTQWFLQHGEKPYFTNAQQGEGVVAISKAAAEAGVEVNKKRSDRGLLPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRLLK+R+ +A R GVT+ L+WVR +E LD+PGIIP ++
Sbjct: 125 RAVVIGFPNVGKSALINRLLKKRVVESARRAGVTKQLRWVRISDQIELLDAPGIIPWKLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA KLAICDDIGE SYD VAA LV +L
Sbjct: 185 DQDAAFKLAICDDIGEASYDNQRVAAALVDLL 216
>gi|298490204|ref|YP_003720381.1| ribosome biogenesis GTP-binding protein YlqF ['Nostoc azollae'
0708]
gi|298232122|gb|ADI63258.1| ribosome biogenesis GTP-binding protein YlqF ['Nostoc azollae'
0708]
Length = 293
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/211 (55%), Positives = 157/211 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QLK +DVV+EVRDARIPL+T HP M++W+G + R+LV+NR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLKRVDVVLEVRDARIPLATNHPQMNEWVGGKSRVLVINRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R+ W +F Q F+N Q G G +++ A+A ++N +R+ +G+LPR VR
Sbjct: 72 ISPQVRSLWVDWFKSQEQVPYFTNAQHGQGITAITKAAQAAGVELNQRRKDRGMLPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR L+ LD+PG+IP R+ +
Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISDQLQLLDAPGVIPSRMEN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QAAA+KLAICDDIGE SYD VAA + +L
Sbjct: 192 QAAAVKLAICDDIGEASYDNQLVAAAFIDIL 222
>gi|255083617|ref|XP_002508383.1| predicted protein [Micromonas sp. RCC299]
gi|226523660|gb|ACO69641.1| predicted protein [Micromonas sp. RCC299]
Length = 355
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/219 (53%), Positives = 166/219 (75%), Gaps = 1/219 (0%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
+ +R VQWYPGHIA+ E+ L++QLK +D V+EVRD RIPL+TTHP + W+GN+ R+LVL
Sbjct: 14 QQVRLVQWYPGHIARAERALREQLKAVDAVVEVRDIRIPLATTHPDIPDWIGNKLRVLVL 73
Query: 155 NREDMISMADRNAWATYFAKQGTK-VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
NR DM++ A+R+ W ++F K+G K V+ ++ + G G ++ +A ++A +VN KR +KGL
Sbjct: 74 NRADMVTDAERSRWVSWFKKRGEKHVVLTDAKTGKGVKRVMEVASSVAKEVNEKRVAKGL 133
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
LPR VR ++GYPNVGKS+LINRL + C +APRPGVTR L+WVR G DL+ LDSPG++
Sbjct: 134 LPRPVRTAVIGYPNVGKSALINRLTNSKTCASAPRPGVTRDLRWVRVGGDLDLLDSPGVL 193
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
P R++DQ AA +LA+ +DIGE SY + VAA L++ + R
Sbjct: 194 PGRLADQTAANRLAMANDIGEASYLASSVAARLIEEMKR 232
>gi|17228240|ref|NP_484788.1| ribosomal biogenesis GTPase [Nostoc sp. PCC 7120]
gi|17130090|dbj|BAB72702.1| all0745 [Nostoc sp. PCC 7120]
Length = 293
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 158/211 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QL +DVV EVRDARIPL+T HP +D+W+GN+ RILVLNR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLSRVDVVFEVRDARIPLATHHPQIDEWVGNKARILVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R+ W YF +G +N Q G G + +++ A+A ++N +RR +G+LPRAVR
Sbjct: 72 IPPQVRSLWIDYFQNRGEVPYCTNAQHGQGVVGVAKAAQAAGVELNQRRRDRGMLPRAVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR LE LD+PG+IP+++ +
Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISDQLELLDAPGVIPVKLGN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+KLAICDDIG+ SYD VAA L+ ++
Sbjct: 192 QEAAVKLAICDDIGQASYDNQLVAAALIDLV 222
>gi|119491444|ref|ZP_01623463.1| GTP-binding protein [Lyngbya sp. PCC 8106]
gi|119453439|gb|EAW34602.1| GTP-binding protein [Lyngbya sp. PCC 8106]
Length = 277
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 114/211 (54%), Positives = 162/211 (76%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ L++QLK +DVV+EVRDARIPL+T HP + QW+G++ ++LV+NR DM
Sbjct: 3 IQWYPGHIAKAERNLQEQLKRVDVVLEVRDARIPLTTHHPQVPQWVGSKAKVLVINRMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS+ + W +F +QG F+N Q G G ++++ A+ + +VN KRRS+G+LPR VR
Sbjct: 63 ISLEVKQQWEDWFMEQGETPYFTNSQKGQGVAEVAKAARKVGVEVNQKRRSRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ +A R GVTR L+WVR +E LD+PG+IP RI++
Sbjct: 123 AVVMGFPNVGKSALINRLLKRKVVDSARRAGVTRSLRWVRISDQIELLDAPGVIPARINN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A+KLA+C+DIGE SY+ +VAA LV+ L
Sbjct: 183 EEKALKLAVCEDIGEASYENQEVAAALVEFL 213
>gi|428312494|ref|YP_007123471.1| Ras superfamily GTP-binding protein YlqF [Microcoleus sp. PCC 7113]
gi|428254106|gb|AFZ20065.1| Ras superfamily GTP-binding protein YlqF [Microcoleus sp. PCC 7113]
Length = 290
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 158/211 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ELK+QLK +DVV+EVRDARIPLST HP + QW+G++ ++LVLNR DM
Sbjct: 6 IQWYPGHIAKAERELKEQLKRVDVVLEVRDARIPLSTHHPQIPQWVGSKAKVLVLNRLDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ A R W ++F +QG F+N Q G G ++S+ ++ +N +RR +G+ PR VR
Sbjct: 66 ITPAVRQLWISWFQQQGETAYFTNAQQGKGIREVSQATQSAGVQMNQRRRDRGMQPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A RPGVTR L+WVR LE LD+PG+IP + +
Sbjct: 126 AVVIGFPNVGKSALINRLLGRRVVDSARRPGVTRQLRWVRISDQLELLDAPGVIPANLKN 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AIKLAICDDIG+ SYD +AA LV++L
Sbjct: 186 QQKAIKLAICDDIGDASYDNQRIAADLVELL 216
>gi|384247552|gb|EIE21038.1| GTPase [Coccomyxa subellipsoidea C-169]
Length = 310
Score = 253 bits (646), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/236 (52%), Positives = 174/236 (73%), Gaps = 4/236 (1%)
Query: 84 ADLDADLYY-WTKSL---RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHP 139
A+LD DL T L R VQWYPGHIA+ E+ LK+QL ++DVV+EVRDARIP+ST H
Sbjct: 10 AELDDDLLLEQTGGLLEGRLVQWYPGHIARAERRLKEQLGMVDVVLEVRDARIPMSTCHS 69
Query: 140 LMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKA 199
+ +W G + R+L+LNR DMIS +DR+AW +F +Q T V++++G G+G+ ++ + A
Sbjct: 70 QLAKWCGTKPRLLLLNRVDMISESDRSAWTRHFKQQKTPVLWTDGVSGLGSGQVRKAALD 129
Query: 200 LASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVR 259
+ +N KRR++GL+PR VRA ++G+PNVGKS+LINRLL RR+C +AP+PGVTR L+W R
Sbjct: 130 ASVAINAKRRNRGLMPRPVRAVMIGFPNVGKSALINRLLNRRVCRSAPKPGVTRDLRWNR 189
Query: 260 FGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
G DL+ LD+PG+IP +DQ AA +LA+C+DIGE SY + +AA L+ L +P+
Sbjct: 190 LGSDLDLLDAPGVIPASFTDQQAAQRLAVCNDIGEASYIDSLIAASLLDTLTALPS 245
>gi|427737499|ref|YP_007057043.1| ribosome biogenesis GTP-binding protein YlqF [Rivularia sp. PCC
7116]
gi|427372540|gb|AFY56496.1| ribosome biogenesis GTP-binding protein YlqF [Rivularia sp. PCC
7116]
Length = 296
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 159/217 (73%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK E++LK+QLKL+DVV+EVRDARIP ST HP + +W+G++ R+L++NR
Sbjct: 9 LNIIQWYPGHIAKAERQLKEQLKLVDVVLEVRDARIPSSTHHPQVSEWIGDKARLLIINR 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DMIS R W YF IF+N + G G +++ A++ S VN +R+ + +LPR
Sbjct: 69 LDMISSEARELWTDYFRANNEVPIFTNAKQGKGVNGVAKAAQSAGSQVNERRKEREMLPR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+RA ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR K+L LD+PG+IP++
Sbjct: 129 PIRAVVIGFPNVGKSALINRLLGKRVVQSAARPGVTRSLRWVRISKELNLLDAPGVIPLK 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ +Q AA+KLAICDDIGE SYD VAA V ++ +
Sbjct: 189 LENQEAALKLAICDDIGEASYDNQKVAAAFVDIVGEM 225
>gi|307105935|gb|EFN54182.1| hypothetical protein CHLNCDRAFT_36060 [Chlorella variabilis]
Length = 287
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 163/216 (75%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYPGHIA+ E+ L++QLK +D+V+EVRD R P+ST HPL+ +W+G + R+L++NR+DM
Sbjct: 2 VQWYPGHIARAERNLREQLKAVDIVLEVRDGRCPMSTRHPLIPEWIGTKPRVLLINRKDM 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ ADR AW +FA++G V ++NG +G G K+ L+ A+ + +N KR ++GL PR VR
Sbjct: 62 VAEADRAAWTRFFAQRGHAVTWTNGSMGDGVGKVMELSAAVGAKLNAKRLARGLRPRPVR 121
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +AP+PGVTR L+W R G D++ LD+PGIIPM D
Sbjct: 122 AVVIGFPNVGKSALINRLLGRRVADSAPKPGVTRSLRWARIGGDIDLLDAPGIIPMSFRD 181
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
Q AA +LA+C+DIGE +Y + VAA ++ + +P
Sbjct: 182 QVAAQRLAMCNDIGEAAYVDSLVAAAFLETVRGLPA 217
>gi|307151345|ref|YP_003886729.1| ribosome biogenesis GTP-binding protein YlqF [Cyanothece sp. PCC
7822]
gi|306981573|gb|ADN13454.1| ribosome biogenesis GTP-binding protein YlqF [Cyanothece sp. PCC
7822]
Length = 283
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 157/214 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+LK+QLK +DVV+EV DARIPL++ HP + +W+G + RILVLNR DM
Sbjct: 5 IQWYPGHIAKAEKQLKEQLKRVDVVLEVVDARIPLASHHPQVPEWIGTKPRILVLNRVDM 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + R W +F QG F+N + G G +S+ A+A+ ++N KR +KGLLPR VR
Sbjct: 65 IPESARQQWLNWFKSQGETAYFTNAKQGQGIQAVSKAAQAVGIEINRKRAAKGLLPRPVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR +E LD+PG+IP ++ D
Sbjct: 125 AVVIGFPNVGKSALINRLLGRKIVASARRAGVTRQLQWVRISDAIELLDAPGVIPSKLDD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AIKLAIC+DIGE +YD VAAIL+ +L +
Sbjct: 185 QKNAIKLAICEDIGEAAYDNQRVAAILIDLLVEL 218
>gi|434402447|ref|YP_007145332.1| ribosome biogenesis GTP-binding protein YlqF [Cylindrospermum
stagnale PCC 7417]
gi|428256702|gb|AFZ22652.1| ribosome biogenesis GTP-binding protein YlqF [Cylindrospermum
stagnale PCC 7417]
Length = 296
Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 161/214 (75%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QLK +DVV+EVRDARIPL+T HP +++W+G++KR+LVLNR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLKRVDVVLEVRDARIPLATNHPQINEWVGDKKRVLVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R+ W +F +QG V F+N Q G G +++ A+A ++N +RR +G+LPR VR
Sbjct: 72 IMPKVRSLWIDWFREQGEFVYFTNAQHGEGITAVAKAAQAAGIELNQRRRDRGMLPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+ +R+ + RPGVTR L+WVR L+ LD+PG+IP R+ +
Sbjct: 132 AVVIGFPNVGKSALINRLIGKRVVASEARPGVTRQLRWVRISDQLQLLDAPGVIPARLEN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLAICDDIGE SYD VAA LV +L I
Sbjct: 192 QTAALKLAICDDIGEASYDNQLVAAALVDLLNEI 225
>gi|414078158|ref|YP_006997476.1| ribosome biogenesis GTP-binding protein [Anabaena sp. 90]
gi|413971574|gb|AFW95663.1| ribosome biogenesis GTP-binding protein [Anabaena sp. 90]
Length = 293
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/214 (54%), Positives = 156/214 (72%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK EK LK+QLK +DVV+EVRDARIP++T HP M++W+G + RILVLNR
Sbjct: 9 LNLIQWYPGHIAKAEKNLKEQLKRVDVVLEVRDARIPITTNHPQMNEWVGTKTRILVLNR 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DMI R+ W +F +G F+N Q G G +++ A+A ++N +R +G+LPR
Sbjct: 69 VDMILPQVRSRWIEWFKNRGEVPYFTNAQHGQGITAITKAAQAAGIELNQRRTDRGMLPR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VRA ++G+PNVGKS+LINRL+ +R+ +A RPGVTR L+WVR L+ LD+PG+IP R
Sbjct: 129 PVRAVVIGFPNVGKSALINRLIGKRVVESAARPGVTRQLRWVRISDQLQLLDAPGVIPAR 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ QAAAIKLAICDDIGE +YD +AA V +L
Sbjct: 189 LDSQAAAIKLAICDDIGEAAYDNQLIAAAFVDIL 222
>gi|427730290|ref|YP_007076527.1| ribosome biogenesis GTP-binding protein YlqF [Nostoc sp. PCC 7524]
gi|427366209|gb|AFY48930.1| ribosome biogenesis GTP-binding protein YlqF [Nostoc sp. PCC 7524]
Length = 294
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 119/211 (56%), Positives = 156/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QL +DVV EVRDARIPL+T HP +D W+GN+ R+LVLNR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLSRVDVVFEVRDARIPLATHHPQIDDWVGNKTRVLVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R+ W YF +G + F+N Q G G +++ A+A ++N +RR +G+LPR VR
Sbjct: 72 IPPQVRSLWVDYFQNRGEEPYFTNAQHGQGITAVAKAAQAAGVELNQRRRDRGMLPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR LE LD+PG+IP ++ +
Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISDQLELLDAPGVIPAKLGN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+KLAICDDIG+ SYD VAA LV +L
Sbjct: 192 QEAAVKLAICDDIGQASYDNQLVAAALVDLL 222
>gi|434389518|ref|YP_007100129.1| ribosome biogenesis GTP-binding protein YlqF [Chamaesiphon minutus
PCC 6605]
gi|428020508|gb|AFY96602.1| ribosome biogenesis GTP-binding protein YlqF [Chamaesiphon minutus
PCC 6605]
Length = 283
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 156/210 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L++Q+K +DVV+EVRDARIP +T HPL+ W+GN+ ++L++NR D
Sbjct: 6 IQWYPGHIAKAERQLQEQVKKVDVVLEVRDARIPFATYHPLLATWIGNKHKLLIVNRVDA 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R WA +F QG + F+N Q G G +S+ A+++ +N KR+ +G+LPR VR
Sbjct: 66 IPPTVRELWAEWFVSQGEQPFFANAQQGTGVAAISKAAQSVGVAINQKRKERGMLPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +R+ +A R GVT+ L+WVR LE LD+PGIIP R+ D
Sbjct: 126 AVVIGFPNVGKSALINRLLNKRVVESARRAGVTKSLRWVRISDRLELLDAPGIIPGRLDD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQM 309
QAAA+KLAICDDIGE YD ++A L+++
Sbjct: 186 QAAAVKLAICDDIGEAGYDRQRISAALIEL 215
>gi|428206140|ref|YP_007090493.1| Ras superfamily GTP-binding protein YlqF [Chroococcidiopsis
thermalis PCC 7203]
gi|428008061|gb|AFY86624.1| Ras superfamily GTP-binding protein YlqF [Chroococcidiopsis
thermalis PCC 7203]
Length = 285
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 156/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK L +QLKL+DVV+EVRDARIPL+T HP + +W+GN+ R+L+LNR D
Sbjct: 5 IQWYPGHIAKAEKALAEQLKLVDVVLEVRDARIPLATHHPRVPEWVGNKTRVLILNRVDA 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I A R W +F +G V F+N + G G ++ ++A+ ++N +R+++GLL R VR
Sbjct: 65 IPPAVRQLWQQWFKTRGETVYFTNAKDGNGVGQVLQVAQRAGDEINQRRKNRGLLARPVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRLLKRR+ + RPGVTR L+WVR +E LD+PG+IP ++ D
Sbjct: 125 AAAIGFPNVGKSALINRLLKRRIVVSEARPGVTRQLRWVRISDRVELLDAPGVIPTKLED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QAAAIKLAICDDIG+ +YD VA I + +L
Sbjct: 185 QAAAIKLAICDDIGDAAYDSYQVAVIFIDLL 215
>gi|443323009|ref|ZP_21052021.1| ribosome biogenesis GTP-binding protein YlqF [Gloeocapsa sp. PCC
73106]
gi|442787313|gb|ELR97034.1| ribosome biogenesis GTP-binding protein YlqF [Gloeocapsa sp. PCC
73106]
Length = 278
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 159/215 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ LK+QLK +D+V+EVRDARIPL++ HP + W+G + R+L++NR DM
Sbjct: 4 IQWYPGHIAKAERALKEQLKRVDLVLEVRDARIPLASHHPQLRAWIGTKPRLLIINRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R W +F QG + F++ G+G +++ A+ + VN KRR +GLLPR VR
Sbjct: 64 ISQQMRQQWLNWFRHQGEEPYFTDAHEGIGIKAVTKAAQLVGVTVNEKRRDRGLLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +++ P+A RPGVTR L+WVR +D+E LD+PG+IP+++ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGKKIVPSARRPGVTRQLRWVRISEDIELLDAPGVIPVKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
Q AIKLAIC+DIGE +YD +A+ + +L +P
Sbjct: 184 QENAIKLAICEDIGEAAYDSQLIASAFIDLLLELP 218
>gi|427417693|ref|ZP_18907876.1| ribosome biogenesis GTP-binding protein YlqF [Leptolyngbya sp. PCC
7375]
gi|425760406|gb|EKV01259.1| ribosome biogenesis GTP-binding protein YlqF [Leptolyngbya sp. PCC
7375]
Length = 304
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/211 (53%), Positives = 155/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ LK+QLK +DVV+E+RDARIPL+T HP +D W+G++ R+LVLNR DM
Sbjct: 6 IQWYPGHIAKAERSLKEQLKRVDVVLEIRDARIPLATHHPEVDDWIGDKSRVLVLNRVDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R +W T+F +QG F+N + G G L R A+ +N +R+ +G+ PR VR
Sbjct: 66 ISAEARQSWQTWFKEQGQAAYFTNSKQGKGVQNLLRAAQDAGKAMNERRKRRGMKPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ + R GVTR L+WVR ++E LD+PGIIP++++D
Sbjct: 126 AVVIGFPNVGKSALINRLLKRKVVVSERRAGVTRQLRWVRISDEIELLDAPGIIPLKLND 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAICDDIG +YD VAA + ++
Sbjct: 186 QDVALKLAICDDIGGAAYDTQRVAAAFLDLI 216
>gi|303287344|ref|XP_003062961.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455597|gb|EEH52900.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 337
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 160/219 (73%), Gaps = 1/219 (0%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
+R VQWYPGHIAK E+ L++QL+ +D V+EVRD RIPL+TTHP + W+G + R+LVLNR
Sbjct: 8 VRLVQWYPGHIAKAERALREQLRGVDAVVEVRDLRIPLATTHPEIPNWIGGKLRVLVLNR 67
Query: 157 EDMISMADRNAWATYFAKQGTK-VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
DM+S +R W +F K G K V+ ++ + G G ++ +A ++ +VN KR +KGL+P
Sbjct: 68 ADMVSDGERQRWVAWFKKNGEKHVVLTDAKSGKGVNRVKEVALLVSEEVNAKRAAKGLMP 127
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R VR I+GYPNVGKS+LINRL + C +APRPGVTR L+WVR G DL+ LDSPG++P
Sbjct: 128 RPVRTAIIGYPNVGKSALINRLTNSKACASAPRPGVTRNLRWVRVGGDLDLLDSPGVLPP 187
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
R++DQAAA +LA+ +DIGE SY ++VAA L + +P
Sbjct: 188 RLADQAAATRLAMANDIGEASYLSSNVAAQLFDEMKTLP 226
>gi|440683100|ref|YP_007157895.1| ribosome biogenesis GTP-binding protein YlqF [Anabaena cylindrica
PCC 7122]
gi|428680219|gb|AFZ58985.1| ribosome biogenesis GTP-binding protein YlqF [Anabaena cylindrica
PCC 7122]
Length = 293
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 158/217 (72%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK EK LK+QLK +DV++EVRDARIPL+T HP M++W+G++ RILV+NR
Sbjct: 9 LNLIQWYPGHIAKAEKNLKEQLKRVDVILEVRDARIPLATNHPQMNEWVGDKSRILVINR 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DMI R+ W +F Q F+N Q G G +++ A+A +N +R+ +G+LPR
Sbjct: 69 LDMILPQVRSHWTDWFKNQEQIPYFTNAQHGQGITAITKAAQAAGIALNQRRKDRGMLPR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
AVRA ++G+PNVGKS+LINRLL +R+ + RPGVTR L+WVR L+ LD+PG+IP R
Sbjct: 129 AVRAVVIGFPNVGKSALINRLLGKRVVASEARPGVTRQLRWVRISDQLQLLDAPGVIPSR 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ +Q AA+KLAICDDIGE SYD +AA V ++ ++
Sbjct: 189 MENQDAAVKLAICDDIGEASYDNQLIAAAFVDIVNQL 225
>gi|427706982|ref|YP_007049359.1| Ras superfamily GTP-binding protein YlqF [Nostoc sp. PCC 7107]
gi|427359487|gb|AFY42209.1| Ras superfamily GTP-binding protein YlqF [Nostoc sp. PCC 7107]
Length = 294
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 157/214 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QLK++DVV+EVRD RIPL+T HP + +W+GN+ RILVLNR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLKMVDVVLEVRDTRIPLATHHPQIGEWVGNKTRILVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ R+ W +F QG F+N Q G G +++ A+A ++N KR +G+LPR VR
Sbjct: 72 ITPQVRSLWTDWFRNQGEMPYFTNAQQGQGVTAIAKAAQAAGVELNKKRCDRGMLPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A RPGVTR L+WVR L+ LD+PG+IP R+ +
Sbjct: 132 AVVIGFPNVGKSALINRLLGRRVVESAARPGVTRSLRWVRISDQLQLLDAPGVIPSRLDN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLAICDDIG+ SYD VA+ LV L I
Sbjct: 192 QDAALKLAICDDIGQASYDNQLVASALVDFLNEI 225
>gi|186684739|ref|YP_001867935.1| ribosomal biogenesis GTPase [Nostoc punctiforme PCC 73102]
gi|186467191|gb|ACC82992.1| GTP-binding protein, HSR1-related [Nostoc punctiforme PCC 73102]
Length = 293
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/220 (55%), Positives = 161/220 (73%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
L +QWYPGHIAK EK+LK+QLK +DVV EVRDARIPL+T HP + +W+ + R+L+LNR
Sbjct: 9 LNVIQWYPGHIAKAEKKLKEQLKRVDVVFEVRDARIPLATHHPQIGEWVEGKTRVLILNR 68
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DMI+ R+ W +F +QG F+N Q G G +++R A+A ++N +R +G+LPR
Sbjct: 69 VDMITPQMRSLWIDWFKRQGEVPYFTNAQHGKGIAEVARAAQAAGVELNQRRSDRGMLPR 128
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VRA ++G+PNVGKS+LINRLL RR+ +A RPGVTR L+WVR + LE LD+PG+IP+R
Sbjct: 129 PVRAVVIGFPNVGKSALINRLLGRRVVESAARPGVTRQLRWVRISEHLELLDAPGVIPLR 188
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
+ DQ AA+KLAICDDIGE SYD VAA LV + + V
Sbjct: 189 LEDQDAALKLAICDDIGEASYDNQLVAAALVDLFNYLEAV 228
>gi|443315548|ref|ZP_21045033.1| ribosome biogenesis GTP-binding protein YlqF [Leptolyngbya sp. PCC
6406]
gi|442784861|gb|ELR94716.1| ribosome biogenesis GTP-binding protein YlqF [Leptolyngbya sp. PCC
6406]
Length = 279
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 154/216 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK L DQLK +DVV+EVRDARIPL+T HP + W+G + +LV+NR DM
Sbjct: 5 IQWYPGHIAKAEKALLDQLKRVDVVLEVRDARIPLATRHPRIQDWIGEKGHVLVMNRVDM 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R AW T+ +QG F+N Q G G ++ +A+ VN +R S+G+ PR VR
Sbjct: 65 ISTEGRAAWETWLRQQGQVPYFANAQQGKGVSAIAHVAQKAGIAVNERRLSRGMRPRPVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ +A R G+TR L+W+R LE LD+PGI+P +I D
Sbjct: 125 AVVIGFPNVGKSALINRLLKRKVVASARRAGITRQLRWIRISDQLELLDAPGILPAQIHD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
Q AA+KLAICDDIGE SYD VAA LV +L + T
Sbjct: 185 QDAALKLAICDDIGEASYDNQRVAAALVDLLKSLGT 220
>gi|428774581|ref|YP_007166369.1| Ras superfamily GTP-binding protein YlqF [Cyanobacterium stanieri
PCC 7202]
gi|428688860|gb|AFZ48720.1| Ras superfamily GTP-binding protein YlqF [Cyanobacterium stanieri
PCC 7202]
Length = 281
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 160/216 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K E++LK+QLK +DVV+EVRDARIPL++ HP + W+G++ RIL+LNREDM
Sbjct: 4 IQWYPGHISKAERQLKEQLKRVDVVLEVRDARIPLASHHPQLKDWIGDKPRILILNREDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ + W +F +G F+N + G G +++ ++ +VN KR+S+G+LPR VR
Sbjct: 64 ITNTLKQEWQEWFKNEGENPFFTNAKDGKGVKAINKASQGCGVEVNKKRQSRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A + GVTR L+WVR KD+E LD+PGIIP+++ +
Sbjct: 124 AVVIGFPNVGKSALINRLLNRKIVASARKAGVTRQLQWVRISKDIELLDAPGIIPLKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
Q A+KLAIC+DIGE +Y+ +VA V +L + T
Sbjct: 184 QDDALKLAICEDIGEAAYENQEVAQKFVDLLVNLGT 219
>gi|75910843|ref|YP_325139.1| ribosomal biogenesis GTPase [Anabaena variabilis ATCC 29413]
gi|75704568|gb|ABA24244.1| Ras superfamily GTP-binding protein YlqF [Anabaena variabilis ATCC
29413]
Length = 293
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 118/211 (55%), Positives = 157/211 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QL +DVV EVRDARIPL+T HP +D+W+GN+ RILVLNR DM
Sbjct: 12 IQWYPGHIAKAEKNLKEQLSRVDVVFEVRDARIPLATHHPQIDEWVGNKARILVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R+ W YF +G +N Q G G +++ A+A ++N +RR +G+LPRAVR
Sbjct: 72 IPPQVRSLWIDYFQNRGEVPYCTNAQHGQGVAGVAKAAQAAGVELNQRRRDRGMLPRAVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR LE LD+PG+IP+++ +
Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISDQLELLDAPGVIPVKLGN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+KLAICDDIG+ SYD VAA L+ ++
Sbjct: 192 QEAAVKLAICDDIGQASYDNQLVAAALIDIV 222
>gi|428769845|ref|YP_007161635.1| Ras superfamily GTP-binding protein YlqF [Cyanobacterium aponinum
PCC 10605]
gi|428684124|gb|AFZ53591.1| Ras superfamily GTP-binding protein YlqF [Cyanobacterium aponinum
PCC 10605]
Length = 280
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 160/214 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K E++LK+QLK +DVV+EVRDARIPL++ HP + QW+G++ R+LVLNREDM
Sbjct: 4 IQWYPGHISKAERQLKEQLKRVDVVLEVRDARIPLASHHPQLKQWIGDKPRLLVLNREDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS + R W +F QG F+N + G G + + ++++ VN +RRS+G+LPR VR
Sbjct: 64 ISDSLRKEWQEWFGAQGEIPFFTNAKDGKGVKAVKKASQSMEKQVNERRRSRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL+R++ +A + GVT+ L+WVR LE LD+PG+IP ++ +
Sbjct: 124 AVVIGFPNVGKSALINRLLQRKIVASARKAGVTKQLQWVRISDQLELLDAPGVIPWKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIGE +YD VAA V +L ++
Sbjct: 184 QEDALKLAICEDIGEAAYDNQLVAADFVDLLVKL 217
>gi|254416738|ref|ZP_05030488.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196176478|gb|EDX71492.1| GTPase, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 285
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 157/215 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QLK +DVV+EVRDARIPL+T HP +W+GN+ RILV+NR D+
Sbjct: 3 IQWYPGHIAKAERQLKEQLKRVDVVLEVRDARIPLTTHHPQTAEWVGNKSRILVINRMDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ + W ++F +QG ++N Q G G ++++ A+ +N +R+++G+ PR VR
Sbjct: 63 ITPKTQQLWTSWFQEQGETPYWTNAQQGKGIREVAQAAQQTGVQMNQRRKNRGMQPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A RPGVTR L+WVR +E LD+PG+IP ++ +
Sbjct: 123 AVVIGFPNVGKSALINRLLGRRVVDSARRPGVTRQLRWVRISDQIELLDAPGVIPAKLQN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
Q A+KLAICDDIGE SYD VA V +L R P
Sbjct: 183 QEDALKLAICDDIGEASYDNQRVACGFVDLLKRSP 217
>gi|427713259|ref|YP_007061883.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. PCC
6312]
gi|427377388|gb|AFY61340.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. PCC
6312]
Length = 302
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 153/211 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QL +DVV+EVRDARIPL++ HP + W+G + R+L+LNR DM
Sbjct: 27 IQWYPGHIAKAEKALKEQLSRVDVVLEVRDARIPLASFHPQIPAWIGTKPRLLILNRLDM 86
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS +R W +F Q F+NGQ G G + + + A+A VN +R+ +G+ PR VR
Sbjct: 87 ISPLEREQWQAWFRSQAESPYFANGQTGDGVVAIFKAAQAAGVTVNERRKLRGMNPRPVR 146
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ +A RPGVTR L+W+R LE LD+PG++P + D
Sbjct: 147 AVVLGFPNVGKSALINRLLKRKIAASAARPGVTRQLRWIRISDQLELLDAPGVLPANLKD 206
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AAIKLAICDDIGE +YD VAA L+ +L
Sbjct: 207 QNAAIKLAICDDIGEAAYDNQRVAAALIDLL 237
>gi|218438564|ref|YP_002376893.1| ribosomal biogenesis GTPase [Cyanothece sp. PCC 7424]
gi|218171292|gb|ACK70025.1| GTP-binding protein HSR1-related [Cyanothece sp. PCC 7424]
Length = 281
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 156/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EKELK+ LK +DVV+EV DARIPL++ HP + +W+G + RILVLNR DM
Sbjct: 5 IQWYPGHIAKAEKELKENLKRVDVVLEVLDARIPLASHHPQVGEWIGTKPRILVLNRVDM 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + +N W +F QG F+N + G G +S+ A+A+ ++N KR +GLLPR VR
Sbjct: 65 IPASVQNQWLKWFKSQGETAYFTNAKQGQGIQAVSKAAQAVGVEMNRKRGERGLLPRPVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR +E LD+PG+IP ++ D
Sbjct: 125 AVVIGFPNVGKSALINRLLGRKIVASARRAGVTRQLRWVRISDAIELLDAPGVIPSKLED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AIKLAIC+DIGE +YD +A+ L+ +L ++
Sbjct: 185 QNDAIKLAICEDIGEAAYDNQRIASSLIDLLVKL 218
>gi|425473004|ref|ZP_18851750.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9701]
gi|389880715|emb|CCI38591.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9701]
Length = 279
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQLDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQIRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|119509302|ref|ZP_01628452.1| hypothetical protein N9414_15165 [Nodularia spumigena CCY9414]
gi|119466144|gb|EAW47031.1| hypothetical protein N9414_15165 [Nodularia spumigena CCY9414]
Length = 294
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/214 (53%), Positives = 159/214 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+LK+QL +DVV+EVRD RIPL+T HP +D+W+G++ R+LVLNR DM
Sbjct: 12 IQWYPGHIAKAEKKLKEQLTRVDVVLEVRDGRIPLATHHPQIDEWVGDKARVLVLNRLDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R+ W +F + G +N + G G +++ A+A +N +RR +G+LPR VR
Sbjct: 72 ISPQVRSLWVDWFKRHGEIAYSTNAKQGQGITAIAKAAQAAGVKLNQRRRDRGMLPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL +R+ +A RPGVTR L+WVR ++LE LD+PG+IP+R+ +
Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRSLRWVRISEELELLDAPGVIPLRMGN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AAIKLAICDDIG+ SYD VA+ + +L +
Sbjct: 192 QEAAIKLAICDDIGQASYDNQLVASAFIDLLNEL 225
>gi|113476888|ref|YP_722949.1| ribosomal biogenesis GTPase [Trichodesmium erythraeum IMS101]
gi|110167936|gb|ABG52476.1| Ras superfamily GTP-binding protein YlqF [Trichodesmium erythraeum
IMS101]
Length = 285
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/216 (51%), Positives = 156/216 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ LK+QLK +DVV+EVRDARIPL+T HP + +W+G++ ++LV+NR DM
Sbjct: 3 IQWYPGHIAKAERNLKEQLKRVDVVLEVRDARIPLATRHPQVSEWVGSKAQVLVINRIDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS W +F G F+N QLG G L++ + VN++RR +G+LPR VR
Sbjct: 63 ISSEVMKIWTEWFEANGEMPYFTNAQLGDGVKNLAKAVREAGRAVNLRRRDRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ +A RPGVT+ L+WVR ++E LD+PG+IP +I +
Sbjct: 123 AVVIGFPNVGKSALINRLLKRKVVESARRPGVTKQLRWVRISDEIELLDAPGVIPSQIKN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
+ AIKLAIC+DIG+ +YD VAA ++ L + T
Sbjct: 183 REDAIKLAICEDIGDAAYDNQQVAASMIDFLTFLET 218
>gi|422304696|ref|ZP_16392037.1| GTPase family protein [Microcystis aeruginosa PCC 9806]
gi|389790101|emb|CCI13969.1| GTPase family protein [Microcystis aeruginosa PCC 9806]
Length = 279
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLVEL 217
>gi|425461781|ref|ZP_18841255.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9808]
gi|389825303|emb|CCI25027.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9808]
Length = 279
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|425436382|ref|ZP_18816818.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9432]
gi|440752137|ref|ZP_20931340.1| ribosome biogenesis GTP-binding protein YlqF [Microcystis
aeruginosa TAIHU98]
gi|389678912|emb|CCH92274.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9432]
gi|440176630|gb|ELP55903.1| ribosome biogenesis GTP-binding protein YlqF [Microcystis
aeruginosa TAIHU98]
Length = 279
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|425446401|ref|ZP_18826405.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9443]
gi|389733392|emb|CCI02838.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9443]
Length = 279
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQIRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|443648941|ref|ZP_21130123.1| ribosome biogenesis GTP-binding protein YlqF [Microcystis
aeruginosa DIANCHI905]
gi|159026387|emb|CAO90485.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335054|gb|ELS49537.1| ribosome biogenesis GTP-binding protein YlqF [Microcystis
aeruginosa DIANCHI905]
Length = 279
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 154/211 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIG+ YD +AA V +L
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLL 214
>gi|425449737|ref|ZP_18829572.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 7941]
gi|389769738|emb|CCI05506.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 7941]
Length = 279
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|22299050|ref|NP_682297.1| ribosomal biogenesis GTPase [Thermosynechococcus elongatus BP-1]
gi|22295232|dbj|BAC09059.1| tlr1507 [Thermosynechococcus elongatus BP-1]
Length = 285
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ LK+QLK +DV+ EVRDARIPL++ HP + QW ++R+LVLN D
Sbjct: 5 IQWYPGHIAKAERALKEQLKQVDVIFEVRDARIPLASCHPQIRQWASGKQRLLVLNGMDR 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS DR W T+F QG V F+N Q G G +L + A + +N +R+ +G+ RAVR
Sbjct: 65 ISDRDRQQWLTWFETQGETVFFTNAQRGEGIRRLEQAAVRAGAAINQRRQQRGMQVRAVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL++R+ +A RPGVTR L+WVR LE LD+PG++PM +
Sbjct: 125 AVVLGFPNVGKSALINRLLQQRVVESAARPGVTRQLRWVRLSPVLELLDAPGVLPMNFKN 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLAICDDIG+ +YD VA +LV+++ ++
Sbjct: 185 QEAAVKLAICDDIGQAAYDPCRVAPMLVEIMQQL 218
>gi|425457270|ref|ZP_18836976.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9807]
gi|389801423|emb|CCI19422.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9807]
Length = 279
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 155/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGKTVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|166364230|ref|YP_001656503.1| ribosomal biogenesis GTPase [Microcystis aeruginosa NIES-843]
gi|166086603|dbj|BAG01311.1| GTPase family protein [Microcystis aeruginosa NIES-843]
Length = 279
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 154/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAHQQWVTWFKSQGKTVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QRDAVKLAICEDIGDAGYDNQRIAAAFVDLLVEL 217
>gi|425441787|ref|ZP_18822054.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9717]
gi|389717396|emb|CCH98497.1| Similar to tr|Q4C7Z2|Q4C7Z2_CROWT GTP-binding [Microcystis
aeruginosa PCC 9717]
Length = 279
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 154/211 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGKTVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIG+ YD +AA V +L
Sbjct: 184 QRDAVKLAICEDIGDAGYDNQRIAAAFVDLL 214
>gi|425467123|ref|ZP_18846407.1| GTPase family protein [Microcystis aeruginosa PCC 9809]
gi|389830197|emb|CCI28014.1| GTPase family protein [Microcystis aeruginosa PCC 9809]
Length = 279
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 154/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + W T+F QG V F+N + G + + A+ + ++N KR+ +G+LPR VR
Sbjct: 64 IPESAHQQWVTWFKSQGKTVYFTNAKQGERVKAIIKAAEKIGDEINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD +AA V +L +
Sbjct: 184 QRDAVKLAICEDIGDAGYDNQRIAAAFVDLLIEL 217
>gi|332711377|ref|ZP_08431309.1| Ras superfamily GTP-binding protein YlqF [Moorea producens 3L]
gi|332349926|gb|EGJ29534.1| Ras superfamily GTP-binding protein YlqF [Moorea producens 3L]
Length = 288
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 156/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ELK+QLK +DVV+EVRDARIPLST HP DQW+GN+ R+LV+NR DM
Sbjct: 3 IQWYPGHIAKAERELKEQLKRVDVVLEVRDARIPLSTNHPQTDQWVGNKTRVLVINRVDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R W ++F KQG F+N Q G G +++ A+ ++N +RRS+G+ PR VR
Sbjct: 63 IDPRMRQLWESWFQKQGDIPYFTNAQQGKGIRAVAKAAQTAGEEINRRRRSRGMRPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A RPGVTR L+W+R LE LD+PG+IP ++++
Sbjct: 123 AVVIGFPNVGKSALINRLLGRRVVESARRPGVTRQLRWIRISDQLELLDAPGVIPAKLNN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAICDDIGE SYD VA LV L
Sbjct: 183 QQQALKLAICDDIGEASYDNQRVATALVAFL 213
>gi|56750444|ref|YP_171145.1| ribosomal biogenesis GTPase [Synechococcus elongatus PCC 6301]
gi|81299923|ref|YP_400131.1| ribosomal biogenesis GTPase [Synechococcus elongatus PCC 7942]
gi|56685403|dbj|BAD78625.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168804|gb|ABB57144.1| Ras superfamily GTP-binding protein YlqF [Synechococcus elongatus
PCC 7942]
Length = 287
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 161/211 (76%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L++QLK +DVV+EVRDARIPL+T HP + WLG+R+R+L+LNR DM
Sbjct: 6 IQWYPGHIAKAERQLQEQLKRVDVVLEVRDARIPLATDHPRLKSWLGSRERLLILNRLDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R AW +F QG +V+ ++ G G +LS+ A+A + +N +R+ +G+LPRAVR
Sbjct: 66 IPAPARQAWIDWFRSQGDRVLLTDAHAGTGVAQLSQAAQAAGAAMNARRKQRGMLPRAVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR + L+ LD+PG++P R+ D
Sbjct: 126 AVVIGFPNVGKSALINRLVKKKVVESARRAGVTRSLRWVRVSEHLDLLDAPGVLPSRLDD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+KLA+CDDIGE +YD VAA LV L
Sbjct: 186 QTAALKLALCDDIGEAAYDNQRVAAALVDCL 216
>gi|428318775|ref|YP_007116657.1| Ras superfamily GTP-binding protein YlqF [Oscillatoria
nigro-viridis PCC 7112]
gi|428242455|gb|AFZ08241.1| Ras superfamily GTP-binding protein YlqF [Oscillatoria
nigro-viridis PCC 7112]
Length = 288
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 152/211 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ LK+QLK +DVV+EVRDARIPL+T HP M W+G + R+LV+NR DM
Sbjct: 3 IQWYPGHIAKAERALKEQLKRVDVVLEVRDARIPLATYHPQMPSWVGGKARVLVINRIDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ R AW T+F QG F+N + G G ++ + +N +R +G+LPR VR
Sbjct: 63 ITPRAREAWETWFETQGETAYFTNAEHGQGVDAVADAVQNAGVQLNKRRFDRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A R GVT+ L+W+R ++E LD+PG+IP RI++
Sbjct: 123 AVVMGFPNVGKSALINRLLGRRVVDSARRAGVTKSLRWIRISDEIELLDAPGVIPTRINN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIGE +YD VAA +V +L
Sbjct: 183 QENALKLAICEDIGEAAYDNQVVAAAMVDLL 213
>gi|390440761|ref|ZP_10228966.1| GTPase family protein [Microcystis sp. T1-4]
gi|389835929|emb|CCI33092.1| GTPase family protein [Microcystis sp. T1-4]
Length = 279
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 153/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+ LKL+DVV+EVRDARIPL++ HP +D W+GN+ R+L+LNR DM
Sbjct: 4 IQWYPGHIAKAERKLKEHLKLVDVVLEVRDARIPLASHHPQVDDWIGNKPRLLILNRLDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W T+F QG V F+N + G + + A+ + +N KR+ +G+LPR VR
Sbjct: 64 IPESAQQQWVTWFKSQGETVYFTNAKQGERVKAIIKAAEKIGDAINQKRQLRGMLPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+WVR LE LD+PG+IP R+ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWVRISDTLELLDAPGVIPSRLDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ YD + A V +L +
Sbjct: 184 QKDAVKLAICEDIGDAGYDNQRIGAAFVDLLVEL 217
>gi|428213287|ref|YP_007086431.1| ribosome biogenesis GTP-binding protein YlqF [Oscillatoria
acuminata PCC 6304]
gi|428001668|gb|AFY82511.1| ribosome biogenesis GTP-binding protein YlqF [Oscillatoria
acuminata PCC 6304]
Length = 287
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 155/217 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K EK+L +QLKL+DVV+EVRDARIPLST HP + QW+G++ R+L++NR D
Sbjct: 6 IQWYPGHISKAEKQLAEQLKLVDVVLEVRDARIPLSTHHPQVPQWVGSKSRVLIINRVDT 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R+ W +F +QG F+N Q G G +S+ AK +N +R +G+ PRAVR
Sbjct: 66 ILPPLRDRWHLWFQRQGETPYFTNAQDGTGIKAISKAAKEAGIALNQRRLDRGMRPRAVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+ RR+ +A R GVT+ L+WVR +LE LD+PG+IP ++ D
Sbjct: 126 AVVIGFPNVGKSALINRLVGRRVVESARRAGVTKQLRWVRISDELELLDAPGVIPSKLED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
Q AA+KLAICDDIGE +YD VA V M+ I +
Sbjct: 186 QDAALKLAICDDIGEAAYDNQRVAWAFVDMVKDIEEI 222
>gi|428774813|ref|YP_007166600.1| Ras superfamily GTP-binding protein YlqF [Halothece sp. PCC 7418]
gi|428689092|gb|AFZ42386.1| Ras superfamily GTP-binding protein YlqF [Halothece sp. PCC 7418]
Length = 283
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/214 (51%), Positives = 156/214 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ELK QLK +DVV+EV DARIPL++ HP + QW+GN+ R+LV+NR+DM
Sbjct: 4 IQWYPGHIAKAERELKQQLKNVDVVLEVLDARIPLASQHPQVSQWVGNKPRLLVINRQDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W +F QG ++ Q G G L + A+ +N KRRS+G+ RAVR
Sbjct: 64 IPESLHSEWMAWFQTQGYSPYLTDAQQGKGIKPLLKAAQKAGEAINEKRRSRGMRDRAVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+ R++ +A + GVTR LKWVR + ++ LD+PG+IP ++ D
Sbjct: 124 AVVMGFPNVGKSALINRLVGRKVVRSARKAGVTRQLKWVRISQQIDLLDAPGVIPPKLED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AAIKLAICDDIGE +YD+ + AA L+++L +
Sbjct: 184 QNAAIKLAICDDIGEAAYDLQNTAAELIELLKQF 217
>gi|428219210|ref|YP_007103675.1| ribosome biogenesis GTP-binding protein YlqF [Pseudanabaena sp. PCC
7367]
gi|427990992|gb|AFY71247.1| ribosome biogenesis GTP-binding protein YlqF [Pseudanabaena sp. PCC
7367]
Length = 283
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/211 (54%), Positives = 148/211 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK LK+QLK +DVVIEVRDARIPL++ HP M++W+ R +LVLNR D
Sbjct: 5 IQWYPGHIAKAEKALKEQLKRVDVVIEVRDARIPLASCHPKMNEWIEGRSHLLVLNRVDA 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + AW +F Q F+N Q G G L + A S VN +R+ +G+LPR VR
Sbjct: 65 IPANIKIAWQDWFVSQKQTPFFTNAQAGKGVKGLLKAAATAGSHVNDRRKKRGMLPRPVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLK+R +A RPGVTR L+W+R +E LD+PGI+P + D
Sbjct: 125 AVVIGFPNVGKSALINRLLKKRAVASANRPGVTRQLRWIRISDQIELLDTPGILPPLLDD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+KLAICDDIG SY+ VAA V++L
Sbjct: 185 QDAALKLAICDDIGTASYEYQLVAAAAVEIL 215
>gi|300863562|ref|ZP_07108508.1| ribosomal biogenesis GTPase [Oscillatoria sp. PCC 6506]
gi|300338429|emb|CBN53650.1| ribosomal biogenesis GTPase [Oscillatoria sp. PCC 6506]
Length = 284
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 112/216 (51%), Positives = 152/216 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QLK +DVV+EVRDARIPL+T HP + W+G + R+LV+NR DM
Sbjct: 3 IQWYPGHIAKAERKLKEQLKRVDVVLEVRDARIPLATHHPQVPMWVGEKARVLVINRMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS R W +F QG F+N Q G ++ A+ +N +RR +G+LPR VR
Sbjct: 63 ISPRVRKVWEEWFEAQGEVPYFTNAQHGQSVEAVAIAARDAGVKLNQRRRDRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRLL RR+ +A R GVTR L+W+R +++E LD+PG+IP RI +
Sbjct: 123 AVAIGFPNVGKSALINRLLGRRVVDSARRAGVTRSLQWIRISEEIELLDAPGVIPTRIEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
Q A KLAIC+DIGE +YD +AA +V +L + T
Sbjct: 183 QEDAEKLAICEDIGEAAYDNQGIAAAMVDLLTYLET 218
>gi|334119114|ref|ZP_08493201.1| ribosome biogenesis GTP-binding protein YlqF [Microcoleus vaginatus
FGP-2]
gi|333458585|gb|EGK87202.1| ribosome biogenesis GTP-binding protein YlqF [Microcoleus vaginatus
FGP-2]
Length = 284
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 151/211 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGHIAK E+ LK+QLK +DVV+EVRDARIPL+T HP M W+G + R+LV+NR DM
Sbjct: 3 IHWYPGHIAKAERALKEQLKRVDVVLEVRDARIPLATFHPQMPSWVGGKARVLVINRMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ R AW T+F QG F+N + G G ++ + +N +R +G+LPR VR
Sbjct: 63 ITPRSREAWETWFEAQGETAYFTNAEHGHGVDAVADAVQNAGVQLNQRRFDRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A R GVT+ L+W+R ++E LD+PG+IP RI++
Sbjct: 123 AVVMGFPNVGKSALINRLLGRRVVDSARRAGVTKSLRWIRISDEIELLDAPGVIPTRINN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIGE +YD VAA +V +L
Sbjct: 183 QENALKLAICEDIGEAAYDNQVVAAAMVDLL 213
>gi|86606591|ref|YP_475354.1| ribosomal biogenesis GTPase [Synechococcus sp. JA-3-3Ab]
gi|86555133|gb|ABD00091.1| GTPase family protein [Synechococcus sp. JA-3-3Ab]
Length = 289
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/215 (53%), Positives = 151/215 (70%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGH+AK +L++QL+L+DV IEV DARIPL++ HP +D+WLG + R+L LNR D
Sbjct: 5 PIQWYPGHVAKAIGQLREQLRLVDVAIEVVDARIPLASRHPELDKWLGEKPRLLALNRAD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
I+ D AW +F++QG V +NGQ G G +L + + VN +R+ G+ PRAV
Sbjct: 65 SIAARDLKAWQEHFSQQGIPVYPTNGQSGEGVPRLKQAILQMGQAVNERRQRWGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +VG+PNVGKS+L+NRLL RR +A RPGVTR L+WVR G +L+ LDSPGI+P +
Sbjct: 125 RAVVVGFPNVGKSALLNRLLGRRAVESAARPGVTRQLQWVRLGGELDLLDSPGILPPSLP 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
DQ AA LAICDDIG +YD VAA V L ++
Sbjct: 185 DQQAASLLAICDDIGAAAYDPEQVAAYFVDQLLQV 219
>gi|33239672|ref|NP_874614.1| ribosomal biogenesis GTPase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237197|gb|AAP99266.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 287
Score = 236 bits (603), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 158/220 (71%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S + +QWYPGHIAK E++L L+ +D+V+EVRDARIPL+T HP + +W+ N+K +LV+N
Sbjct: 2 STQIIQWYPGHIAKAEQQLSKSLEKVDLVVEVRDARIPLATGHPCLHKWIRNKKHLLVIN 61
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
R DMIS N+W +F + G + + N + G GT K+ A L +D+N +R S+G+
Sbjct: 62 RRDMISQKAFNSWDNWFKENGQEAWWCNAKDGNGTNKIKEAAIKLGNDLNNRRESRGMRK 121
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
RAVRA I+G+PNVGKS+LINRL+ +++ +A R GVT+ L+WVR G+ L+ LD+PG++P
Sbjct: 122 RAVRALILGFPNVGKSALINRLVNKKVVKSARRAGVTKSLQWVRVGQQLDLLDAPGVLPP 181
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
++ DQ AA+KLA+CDDIG+ SYDV VA + +L ++
Sbjct: 182 QLEDQEAAVKLALCDDIGQASYDVESVAIKFLNILNQVKN 221
>gi|86608130|ref|YP_476892.1| ribosomal biogenesis GTPase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556672|gb|ABD01629.1| GTPase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 283
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 148/214 (69%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK +L+++L+ +D VIEV DARIPL++ HP + +WLG + R+L LNR D
Sbjct: 6 IQWYPGHIAKAIGQLREELQRVDAVIEVLDARIPLASRHPELGRWLGEKPRLLALNRADC 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I D AW YF +QG V +NG+ G G +L + L VN +R+ +G+ PRAVR
Sbjct: 66 IEAGDLKAWQEYFLRQGIPVYPTNGRSGEGVNRLKQAVLHLGQSVNTRRQQRGMRPRAVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG+PNVGKS+L+NRLL RR +A RPGVTR L+WVR G +L+ LDSPGIIP + D
Sbjct: 126 AVVVGFPNVGKSALLNRLLGRRAAESAARPGVTRQLRWVRLGGELDLLDSPGIIPPSLPD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA LAICDDIGE +YD VAA + + R+
Sbjct: 186 QQAASLLAICDDIGEAAYDPERVAAHFLDQVLRV 219
>gi|428778573|ref|YP_007170359.1| ribosome biogenesis GTP-binding protein YlqF [Dactylococcopsis
salina PCC 8305]
gi|428692852|gb|AFZ49002.1| ribosome biogenesis GTP-binding protein YlqF [Dactylococcopsis
salina PCC 8305]
Length = 280
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 154/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ELK QLK +DVV+EV DARIPL++ HP + QW+G++ R+LV+NR+DM
Sbjct: 4 IQWYPGHIAKAEQELKRQLKNVDVVLEVLDARIPLASQHPQVSQWVGSKPRLLVINRQDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + W +F QG ++ Q G G L + A+ VN KRRS+G+ R VR
Sbjct: 64 IPEELHSQWVAWFQSQGYSPYLTDAQAGKGIKSLLKAAQKAGEAVNEKRRSRGMRDRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+ R++ +A + GVTR LKWVR ++ LD+PG+IP ++ D
Sbjct: 124 AVVMGFPNVGKSALINRLVGRKIVQSARKAGVTRQLKWVRISDQIDLLDAPGVIPPKLKD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
QAAAIKLAICDDIGE YD+ ++A+ L+ +L ++
Sbjct: 184 QAAAIKLAICDDIGEAGYDLQNIASDLIDLLKQL 217
>gi|126660249|ref|ZP_01731365.1| hypothetical protein CY0110_06809 [Cyanothece sp. CCY0110]
gi|126618488|gb|EAZ89241.1| hypothetical protein CY0110_06809 [Cyanothece sp. CCY0110]
Length = 278
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 153/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QL +DV+ EV DARIPL++ HP + QW+G++ R+LVLNR DM
Sbjct: 4 IQWYPGHIAKAERQLKEQLNRVDVIFEVLDARIPLASHHPDVPQWIGDKPRLLVLNRMDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + R W +FA QG K+ ++N + G G L++ A+ +N +R +G+ PRAVR
Sbjct: 64 IPESVRQDWLNWFAAQGEKIYYTNAKQGKGIKPLTKAAQGAGVQMNQRRCDRGMRPRAVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+W+R LE LD+PGIIP ++ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWIRISDSLELLDAPGIIPAKLDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIGE +YD + A LV +L +
Sbjct: 184 QEDAVKLAICEDIGEAAYDNQQIGAALVDLLVEL 217
>gi|113953127|ref|YP_731895.1| ribosomal biogenesis GTPase [Synechococcus sp. CC9311]
gi|113880478|gb|ABI45436.1| GTPase family protein [Synechococcus sp. CC9311]
Length = 292
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 156/212 (73%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++WL ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKRNLDKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ A AW +F QG + ++ + + G G ++ + A + +N +R+++G+ PRAV
Sbjct: 65 MVTTAAWEAWDQWFKAQGQRTVWCDAKAGTGVKQVQQAAIRAGNQLNERRKNRGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +YD VA +Q+L
Sbjct: 185 DQKAALHLALCDDIGQAAYDGELVAQAFLQLL 216
>gi|254424502|ref|ZP_05038220.1| GTPase, putative [Synechococcus sp. PCC 7335]
gi|196191991|gb|EDX86955.1| GTPase, putative [Synechococcus sp. PCC 7335]
Length = 296
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 159/214 (74%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK L++Q+K +DVV+EVRDARIPL+T HP +D+WLG++KR+LV+NR DM
Sbjct: 6 IQWYPGHIAKAEKALQEQIKRVDVVLEVRDARIPLATLHPDLDRWLGDKKRVLVVNRVDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ R+ W +F G ++N G G ++++ A+ + +N +R+ +G+ R VR
Sbjct: 66 IAPQMRDRWQAWFKANGQTAYYTNANQGKGVGQIAKAAQQAGAAMNQRRKDRGMRSRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLLKR++ +A + G+TR L+WVR ++E LD+PGIIP +++D
Sbjct: 126 AVVIGFPNVGKSALINRLLKRKIVESARKAGITRQLRWVRISDEIELLDAPGIIPAQLTD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLAICDDIGE +YD VAA V++L +
Sbjct: 186 QKAALKLAICDDIGEAAYDTQRVAAAFVELLKEL 219
>gi|443477353|ref|ZP_21067207.1| ribosome biogenesis GTP-binding protein YlqF [Pseudanabaena biceps
PCC 7429]
gi|443017549|gb|ELS31966.1| ribosome biogenesis GTP-binding protein YlqF [Pseudanabaena biceps
PCC 7429]
Length = 279
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 155/215 (72%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK+L +QLKL+DVVIEVRD+RI +S+ HP +++W+ + ILV NR D
Sbjct: 4 PIQWYPGHIAKAEKQLLEQLKLVDVVIEVRDSRILMSSKHPKIEKWVEGKSHILVCNRID 63
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
IS + + W +F +Q F++ Q G G + L + A+ VN +RR +G+LPR V
Sbjct: 64 AISSSVKMQWTRWFTEQERMAYFTDAQAGKGMVDLLKAAQVAGEKVNERRRGRGMLPRPV 123
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +VG+PNVGKS+LINRLLK+++ +A +PGVTR L+W+R ++E LD+PG+IP +
Sbjct: 124 RAVVVGFPNVGKSALINRLLKKKVVASANKPGVTRQLRWIRISDEIELLDTPGVIPPLLH 183
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
DQ AA+KLAICDDIG+ +YD VAA V +L ++
Sbjct: 184 DQDAALKLAICDDIGQAAYDNVLVAAEAVDLLIQL 218
>gi|220907963|ref|YP_002483274.1| ribosomal biogenesis GTPase [Cyanothece sp. PCC 7425]
gi|219864574|gb|ACL44913.1| GTP1/OBG protein [Cyanothece sp. PCC 7425]
Length = 327
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/214 (52%), Positives = 154/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK L QL+ +DVV+EVRDARIPL++ HP + QW+G++ R+LV+NR D+
Sbjct: 6 IQWYPGHIAKAEKALLTQLQRVDVVLEVRDARIPLASCHPQVRQWIGHKPRVLVMNRLDL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS+ R W + QG F++ Q G G ++ AKA+ +N +R +G+ PR VR
Sbjct: 66 ISVPARQLWQDWLVGQGETPYFTDAQQGKGVAAVAAAAKAVGVQINQRRHDRGMQPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A RPGVTR L+WVR LE LD+PG++P R++D
Sbjct: 126 AVVIGFPNVGKSALINRLLNRRVVDSARRPGVTRQLRWVRISDQLELLDAPGVLPSRLTD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA KLAICDDIGE +Y+ ++AA LV +L +
Sbjct: 186 QQAATKLAICDDIGEAAYNTQNMAAALVDLLQHL 219
>gi|352095568|ref|ZP_08956582.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. WH
8016]
gi|351678710|gb|EHA61855.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. WH
8016]
Length = 292
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 155/212 (73%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++WL ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKRNLDKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ A AW +F QG + ++ + + G G + + A + +N +R+++G+ PRAV
Sbjct: 65 MVTPAAWEAWDQWFKAQGQRTVWCDAKAGTGVKLVQQAAIRAGNQLNERRKTRGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +YD VA +++L
Sbjct: 185 DQRAALHLALCDDIGQAAYDGELVAQAFLKLL 216
>gi|452825101|gb|EME32100.1| GTP-binding family protein isoform 2 [Galdieria sulphuraria]
Length = 356
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 150/220 (68%), Gaps = 1/220 (0%)
Query: 98 RP-VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
RP VQWYPGHIAK E+ LKD+L+L+DVV+EVRDARIP ST HP + WLG +KR++VLNR
Sbjct: 52 RPKVQWYPGHIAKAERVLKDKLRLVDVVLEVRDARIPKSTEHPELQSWLGEKKRLVVLNR 111
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DM+ + W +QG +V +N +LG G +L + +N KRR KGLLPR
Sbjct: 112 RDMVPQEALSVWIKTIKQQGFEVFDTNAKLGNGIQRLRKALIFCGKAINEKRRVKGLLPR 171
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+V IVGYPNVGKS+LINRL+ R + + RPGVTR +W++ ++ LDSPGIIP +
Sbjct: 172 SVHCMIVGYPNVGKSALINRLVNRAIAKSQNRPGVTRTFQWIQVSDQIQLLDSPGIIPPK 231
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
+ Q++A KLA C+DIG SYD VA+ L++ + + TV
Sbjct: 232 LVSQSSAEKLAFCNDIGSGSYDNQVVASALLECIRNVGTV 271
>gi|452825102|gb|EME32101.1| GTP-binding family protein isoform 1 [Galdieria sulphuraria]
Length = 338
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 150/220 (68%), Gaps = 1/220 (0%)
Query: 98 RP-VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
RP VQWYPGHIAK E+ LKD+L+L+DVV+EVRDARIP ST HP + WLG +KR++VLNR
Sbjct: 52 RPKVQWYPGHIAKAERVLKDKLRLVDVVLEVRDARIPKSTEHPELQSWLGEKKRLVVLNR 111
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
DM+ + W +QG +V +N +LG G +L + +N KRR KGLLPR
Sbjct: 112 RDMVPQEALSVWIKTIKQQGFEVFDTNAKLGNGIQRLRKALIFCGKAINEKRRVKGLLPR 171
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+V IVGYPNVGKS+LINRL+ R + + RPGVTR +W++ ++ LDSPGIIP +
Sbjct: 172 SVHCMIVGYPNVGKSALINRLVNRAIAKSQNRPGVTRTFQWIQVSDQIQLLDSPGIIPPK 231
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
+ Q++A KLA C+DIG SYD VA+ L++ + + TV
Sbjct: 232 LVSQSSAEKLAFCNDIGSGSYDNQVVASALLECIRNVGTV 271
>gi|409993930|ref|ZP_11277055.1| GTPase YlqF [Arthrospira platensis str. Paraca]
gi|291568869|dbj|BAI91141.1| hypothetical protein [Arthrospira platensis NIES-39]
gi|409935217|gb|EKN76756.1| GTPase YlqF [Arthrospira platensis str. Paraca]
Length = 277
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 148/214 (69%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ L +QLK +DVV+EVRDARIPL+T HP + QW+ + R+L++NR+DM
Sbjct: 3 IQWYPGHIAKAERTLTEQLKRVDVVLEVRDARIPLATHHPKVSQWVSQKPRLLIINRQDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + W +F + F+N Q G G + R K +N KR+ +G+LPR VR
Sbjct: 63 IPPHIQQQWQQWFEEHQEIPYFTNAQQGDGVDAVVRATKQAGEQLNQKRQQRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
AG++G+PNVGKS+LINRLL RR+ +A R GVTR L+WVR K +E LD+PG+IP RI +
Sbjct: 123 AGVIGFPNVGKSALINRLLGRRVVESARRAGVTRKLQWVRISKQIELLDAPGVIPSRIEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIGE YD VAA +V + +
Sbjct: 183 QQDALKLAICEDIGEAGYDNQRVAAGMVDLFQHL 216
>gi|424513536|emb|CCO66158.1| ribosomal biogenesis GTPase [Bathycoccus prasinos]
Length = 434
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/241 (46%), Positives = 163/241 (67%), Gaps = 17/241 (7%)
Query: 92 YWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLG----- 146
+ KS+R VQWYPGHIA+ E+ L+DQLK +D V+EVRD RIPL+T+HP + W+G
Sbjct: 123 FNAKSVRLVQWYPGHIARAERLLRDQLKNVDCVVEVRDLRIPLATSHPDVAAWVGSSRDN 182
Query: 147 ----------NRKRILVLNREDMISMADRNAWATYFAKQGTK--VIFSNGQLGMGTMKLS 194
+ I VLNR DM+ +R W +YF + + VI ++ + G G ++
Sbjct: 183 SNNNANNSSSGKLHITVLNRSDMVDEQERAKWVSYFKHKMKERHVIVTDAKSGRGVEQVK 242
Query: 195 RLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRV 254
++A ++A +VN KR KGLL R VR +VGYPNVGKS+LINRL+ ++ C +APRPGVTR
Sbjct: 243 KIALSVAKEVNEKRIQKGLLARPVRTAVVGYPNVGKSALINRLVGKKACASAPRPGVTRD 302
Query: 255 LKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIP 314
L+WVR ++++ LDSPG++P R+SDQ AA +LA+ +DIGE SY ++VAA L + + +P
Sbjct: 303 LRWVRVSEEIDLLDSPGVLPPRMSDQDAANRLAMANDIGEASYKASEVAARLFEEMKMLP 362
Query: 315 T 315
+
Sbjct: 363 S 363
>gi|284929093|ref|YP_003421615.1| Ras superfamily GTP-binding protein YlqF [cyanobacterium UCYN-A]
gi|284809552|gb|ADB95257.1| Ras superfamily GTP-binding protein YlqF [cyanobacterium UCYN-A]
Length = 278
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 154/211 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K E++LK+Q+K +D++ E+ DARIP+++ HP ++QW+ + +I VLNR DM
Sbjct: 4 IQWYPGHISKAERQLKEQIKNIDIIFEILDARIPIASHHPNINQWIEGKPKITVLNRMDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + W +F ++G F++ + G G L++LAK + VN+KR ++G+ PR VR
Sbjct: 64 IPQSLYQKWLNWFKERGETAHFTDAKQGKGIKSLNQLAKEAGNLVNIKRVNRGMRPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+W+R K +E LD+PG+IP+++ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVAISARRAGVTRQLQWIRISKTIELLDAPGVIPIKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AIKLAIC+DIGE +YD VAA L+ +L
Sbjct: 184 QKNAIKLAICEDIGEAAYDNQQVAAKLIDLL 214
>gi|428222409|ref|YP_007106579.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. PCC
7502]
gi|427995749|gb|AFY74444.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. PCC
7502]
Length = 286
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 147/214 (68%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK L +QLK +DVVIEVRDARIP+++THP + W R +LV+NR DM
Sbjct: 11 IQWYPGHIAKAEKALSEQLKRVDVVIEVRDARIPIASTHPKIATWTEGRSHLLVMNRLDM 70
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS + +F +Q +V F+N + G G +L + A+ VN +R S+G+LPR VR
Sbjct: 71 ISGLHQKQLQRWFNQQEQEVFFTNAKDGDGIKQLLKAAQVAGIRVNERRHSRGMLPRPVR 130
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ ++ RPGVTR L+W+R +E LD+PG +P + D
Sbjct: 131 AAVIGFPNVGKSALINRLLNRRVAESSNRPGVTRQLRWIRISDAIELLDTPGNLPSLLGD 190
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLAICDDIG+ +YD +AA V I
Sbjct: 191 QDAAVKLAICDDIGQAAYDNVLIAAAAVDKFKEI 224
>gi|209526709|ref|ZP_03275232.1| GTP-binding protein HSR1-related [Arthrospira maxima CS-328]
gi|376002378|ref|ZP_09780213.1| ribosomal biogenesis GTPase; GTP-binding protein HSR1-related
[Arthrospira sp. PCC 8005]
gi|423067923|ref|ZP_17056713.1| GTP-binding protein HSR1-related protein [Arthrospira platensis C1]
gi|209492841|gb|EDZ93173.1| GTP-binding protein HSR1-related [Arthrospira maxima CS-328]
gi|375329258|emb|CCE15966.1| ribosomal biogenesis GTPase; GTP-binding protein HSR1-related
[Arthrospira sp. PCC 8005]
gi|406710551|gb|EKD05759.1| GTP-binding protein HSR1-related protein [Arthrospira platensis C1]
Length = 277
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 146/211 (69%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ L +QLK +DVV+EVRDARIPL+T HP + QW+ + R+L++NR+DM
Sbjct: 3 IQWYPGHIAKAERTLTEQLKRVDVVLEVRDARIPLATHHPKVSQWVSQKPRLLIINRQDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + W +F + F+N Q G G + R K +N KR+ +G+LPR VR
Sbjct: 63 IPPHIQQQWQQWFEEHQEIPYFTNAQQGDGVDAVVRATKQAGEQLNQKRQQRGMLPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL RR+ +A R GVTR L+WVR K +E LD+PG+IP RI +
Sbjct: 123 AVVIGFPNVGKSALINRLLGRRVVESARRAGVTRKLQWVRISKQIELLDAPGVIPSRIEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIGE YD VAA +V +
Sbjct: 183 QQDALKLAICEDIGEAGYDNQRVAAGMVDLF 213
>gi|124024983|ref|YP_001014099.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. NATL1A]
gi|123960051|gb|ABM74834.1| Predicted GTPases [Prochlorococcus marinus str. NATL1A]
Length = 287
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 153/217 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+LK+ L+ +D+V EVRDARIPL+T+HP + +WL +K+ILVLNR+DM
Sbjct: 6 IQWYPGHIAKAEKQLKENLRKVDLVFEVRDARIPLATSHPYLQKWLKGKKQILVLNRKDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I++ AW +G + + + G G +++ A ++N +R +G+ RA+R
Sbjct: 66 INIDAYQAWDKKLRSEGKVPWWCDAKAGTGVLQIKNAAIRAGQELNQRRLDRGMKNRAIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+G+PNVGKS+LINRL+K+++ ++ +PGVTR L+WVR G+DL+ LD+PG++P R D
Sbjct: 126 VLTLGFPNVGKSALINRLVKKKVVSSSRKPGVTRSLRWVRLGQDLDLLDAPGVLPPRFED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
Q AA+KLAICDDIG+ +YD VA +++L + +
Sbjct: 186 QNAALKLAICDDIGQAAYDTEQVAISFMKLLETLENI 222
>gi|72383397|ref|YP_292752.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. NATL2A]
gi|72003247|gb|AAZ59049.1| Ras superfamily GTP-binding protein YlqF [Prochlorococcus marinus
str. NATL2A]
Length = 287
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 152/217 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+LK+ L +D+V EVRDARIPL+T+HP + +WL +K+ILVLNR+DM
Sbjct: 6 IQWYPGHIAKAEKQLKENLSKVDLVFEVRDARIPLATSHPYLQKWLKGKKQILVLNRKDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I++ AW +G + + + G G +++ A ++N +R +G+ RA+R
Sbjct: 66 INVEAYQAWDKKLRSEGKVPWWCDAKAGTGVLQIKHAAIRAGQELNQRRLDRGMKNRAIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+G+PNVGKS+LINRL+K+++ ++ +PGVTR L+WVR G+DL+ LD+PG++P R D
Sbjct: 126 VLTLGFPNVGKSALINRLVKKKVVSSSRKPGVTRSLRWVRLGQDLDLLDAPGVLPPRFED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
Q AA+KLAICDDIG+ +YD VA +++L + +
Sbjct: 186 QNAALKLAICDDIGQAAYDTEQVAISFMKLLETLENI 222
>gi|16330541|ref|NP_441269.1| ribosomal biogenesis GTPase [Synechocystis sp. PCC 6803]
gi|383322282|ref|YP_005383135.1| hypothetical protein SYNGTI_1373 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325451|ref|YP_005386304.1| hypothetical protein SYNPCCP_1372 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491335|ref|YP_005409011.1| hypothetical protein SYNPCCN_1372 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436602|ref|YP_005651326.1| hypothetical protein SYNGTS_1373 [Synechocystis sp. PCC 6803]
gi|451814699|ref|YP_007451151.1| hypothetical protein MYO_113850 [Synechocystis sp. PCC 6803]
gi|1653032|dbj|BAA17949.1| slr0267 [Synechocystis sp. PCC 6803]
gi|339273634|dbj|BAK50121.1| hypothetical protein SYNGTS_1373 [Synechocystis sp. PCC 6803]
gi|359271601|dbj|BAL29120.1| hypothetical protein SYNGTI_1373 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274771|dbj|BAL32289.1| hypothetical protein SYNPCCN_1372 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277941|dbj|BAL35458.1| hypothetical protein SYNPCCP_1372 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958464|dbj|BAM51704.1| ribosomal biogenesis GTPase [Synechocystis sp. PCC 6803]
gi|451780668|gb|AGF51637.1| hypothetical protein MYO_113850 [Synechocystis sp. PCC 6803]
Length = 279
Score = 224 bits (572), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 152/211 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L++QL +DVV+EV DARIPL++ HP + W+G + ++++LNR DM
Sbjct: 4 IQWYPGHIAKAERQLREQLNKVDVVLEVIDARIPLASQHPDVPLWVGEKPKLIILNRVDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ + W T+F +Q V ++N + G G +S+ A+ VN +R+ +G+ PR VR
Sbjct: 64 ITPELQEQWLTWFRQQNQTVYYANAKQGTGVKAISKAAQQAGKAVNERRQRRGMQPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+W+R LE LDSPG+IP+++ +
Sbjct: 124 AVVMGFPNVGKSALINRLLGRKVVESARRAGVTRQLRWIRISDSLELLDSPGVIPLKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA A+KLAIC+DIGE +Y+ VA +V +L
Sbjct: 184 QANALKLAICEDIGEAAYENQAVAIAMVDLL 214
>gi|428202675|ref|YP_007081264.1| ribosome biogenesis GTP-binding protein YlqF [Pleurocapsa sp. PCC
7327]
gi|427980107|gb|AFY77707.1| ribosome biogenesis GTP-binding protein YlqF [Pleurocapsa sp. PCC
7327]
Length = 280
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/211 (52%), Positives = 156/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QLK +DVV+EV DARIPL++ HP + +W+G++ RIL+LNR DM
Sbjct: 5 IQWYPGHIAKAERQLKEQLKRVDVVLEVLDARIPLASHHPQVAEWIGSKPRILILNRADM 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + R AW +F ++G F++ Q G G +S+ A+A ++N +RR +G+ PR VR
Sbjct: 65 IPESVRQAWQAWFKRRGEVPYFTDAQQGQGIRAVSKAAQAAGVEMNRRRRDRGMRPRPVR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R+ +A R GVTR L+WVR + +E LD+PG+IP ++ +
Sbjct: 125 AVVIGFPNVGKSALINRLLGRKAVASARRAGVTRQLQWVRISESIELLDAPGVIPSKLDN 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIGE +YD VAA LV +L
Sbjct: 185 QTDAVKLAICEDIGEAAYDNQHVAAALVDLL 215
>gi|257061869|ref|YP_003139757.1| ribosomal biogenesis GTPase [Cyanothece sp. PCC 8802]
gi|256592035|gb|ACV02922.1| GTP-binding protein HSR1-related [Cyanothece sp. PCC 8802]
Length = 281
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 148/214 (69%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K E++LK+QL +DVV+EV DARIPL++ HP + QW+G + RILV+NR DM
Sbjct: 4 IQWYPGHISKAERQLKEQLNRVDVVLEVLDARIPLASHHPQIPQWIGQKPRILVINRVDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R W ++F F+N + G G + + A+ +N +R +G+ PR VR
Sbjct: 64 IPDFVRQQWLSWFTHNNETPYFTNAKQGTGVKAILKAAQQTGVAMNQRRHDRGMRPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+LINRLL R++ +A R GVTR L+WVR + +E LDSPG+IP ++ +
Sbjct: 124 AVVIGMPNVGKSALINRLLGRKIVESARRAGVTRQLRWVRISEAIELLDSPGVIPGKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A KLAIC+DIGE +YD ++AAILV +L +
Sbjct: 184 QKDAAKLAICEDIGEAAYDNQEMAAILVDLLVEL 217
>gi|67921122|ref|ZP_00514641.1| GTP-binding [Crocosphaera watsonii WH 8501]
gi|416396019|ref|ZP_11686395.1| 50S ribosomal subunit maturation GTPase RbgA (YlqF-like)
[Crocosphaera watsonii WH 0003]
gi|67857239|gb|EAM52479.1| GTP-binding [Crocosphaera watsonii WH 8501]
gi|357263025|gb|EHJ12085.1| 50S ribosomal subunit maturation GTPase RbgA (YlqF-like)
[Crocosphaera watsonii WH 0003]
Length = 279
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 151/214 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QL +DV+ EV DARIPL++ HP + W+G++ R++VLNR DM
Sbjct: 4 IQWYPGHIAKAERQLKEQLNRVDVIFEVLDARIPLASHHPDVPGWIGDKPRLVVLNRTDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + R W +FA QG + +N + G G L + A+A +N +R+ +G+ PRAVR
Sbjct: 64 IPESVRQGWLNWFAAQGETLYCTNAKQGKGIKALKKAAQAAGVQMNERRQQRGMRPRAVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+W+R LE LD+PGIIP ++ +
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVAASARRAGVTRQLQWIRISDALELLDAPGIIPAKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIGE +YD + A L+ +L +
Sbjct: 184 QEDAVKLAICEDIGEAAYDNQQIGAALIDLLVEL 217
>gi|427703988|ref|YP_007047210.1| ribosome biogenesis GTP-binding protein YlqF [Cyanobium gracile PCC
6307]
gi|427347156|gb|AFY29869.1| ribosome biogenesis GTP-binding protein YlqF [Cyanobium gracile PCC
6307]
Length = 318
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 155/218 (71%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK L L+ +D+VIEVRDARIPL+T HP + +W+ ++ +LV+NR D
Sbjct: 16 PIQWYPGHIAKAEKALSANLEKVDLVIEVRDARIPLATGHPRLQRWIRGKQHLLVINRRD 75
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M+S R AW +F ++G + + ++G G +L + A +N +R +G+ PR V
Sbjct: 76 MVSAGARLAWDGWFRQRGEVPWWCDAKVGTGVKQLQQAAIRAGETLNARRAGRGMKPRPV 135
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 136 RALMLGFPNVGKSALINRLVRQKVVESARRAGVTRSLRWVRLGQDLDLLDAPGVLPPRLD 195
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
DQ A ++LA+CDDIG+ SYD VA +++LA++ V
Sbjct: 196 DQLAGLRLALCDDIGQASYDGEAVAQAFLRLLAQLEPV 233
>gi|172035401|ref|YP_001801902.1| ribosomal biogenesis GTPase [Cyanothece sp. ATCC 51142]
gi|354555493|ref|ZP_08974794.1| ribosome biogenesis GTP-binding protein YlqF [Cyanothece sp. ATCC
51472]
gi|171696855|gb|ACB49836.1| unknown [Cyanothece sp. ATCC 51142]
gi|353552552|gb|EHC21947.1| ribosome biogenesis GTP-binding protein YlqF [Cyanothece sp. ATCC
51472]
Length = 283
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 151/214 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QL +DV+ EV DARIPL++ HP + QW+G++ R+LVLNR DM
Sbjct: 4 IQWYPGHIAKAERQLKEQLNRVDVIFEVLDARIPLASHHPDVPQWIGDKPRLLVLNRMDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + R W +FA QG V ++N + G G L + A+ +N +RR +G+ PR VR
Sbjct: 64 IPESVRQGWLNWFAAQGETVYYTNAKQGKGIKPLKKAAQEAGVQMNQRRRDRGMRPRGVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRLL R++ +A R GVTR L+W+R DLE LD+PGIIP ++
Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWIRIADDLELLDAPGIIPAKLDT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIGE +YD + A LV +L +
Sbjct: 184 QEDAVKLAICEDIGEAAYDNQQIGAALVDLLVEL 217
>gi|254430864|ref|ZP_05044567.1| hypothetical protein CPCC7001_755 [Cyanobium sp. PCC 7001]
gi|197625317|gb|EDY37876.1| hypothetical protein CPCC7001_755 [Cyanobium sp. PCC 7001]
Length = 323
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/199 (50%), Positives = 144/199 (72%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK L L +D+VIEVRDARIPL+T HP + +W+G++ +L LNR DM
Sbjct: 28 IQWYPGHIAKAEKALNAALAKVDLVIEVRDARIPLATGHPRLQRWIGSKPHLLALNRVDM 87
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I R AW+ +F QG V + + + G G +L + A + +N +R +G+ PR VR
Sbjct: 88 IPREAREAWSAWFKHQGQVVWWCDAKAGTGVKQLQQAAIRAGAALNRRRVDRGMRPRPVR 147
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 148 ALMLGFPNVGKSALINRLVRQKVVDSARRAGVTRSLRWVRLGQDLDLLDAPGVLPPRLDD 207
Query: 280 QAAAIKLAICDDIGERSYD 298
Q AA++LA+CDDIG+ +YD
Sbjct: 208 QQAALRLALCDDIGQAAYD 226
>gi|87300809|ref|ZP_01083651.1| hypothetical protein WH5701_05155 [Synechococcus sp. WH 5701]
gi|87284680|gb|EAQ76632.1| hypothetical protein WH5701_05155 [Synechococcus sp. WH 5701]
Length = 303
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 153/217 (70%)
Query: 94 TKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILV 153
++S +QWYPGHIAK E++L QL +D+VIEVRDARIP +T HP + +W+ + R+LV
Sbjct: 13 SQSAPAIQWYPGHIAKAERQLFTQLAKVDLVIEVRDARIPRATGHPRLQRWMKAKPRLLV 72
Query: 154 LNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+NR DMI+ A R AW + K+G + + ++G G +L A S +N +R +G+
Sbjct: 73 INRRDMINEAARQAWDHWLRKRGETPWWCDAKVGTGVKQLQEAAIRAGSQLNARRAGRGM 132
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
PR VRA ++G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G++L+ LD+PG++
Sbjct: 133 RPRPVRALMLGFPNVGKSALINRLVRQKVVDSARRAGVTRTLRWVRLGQELDLLDAPGVL 192
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
P R+ DQ AA+ LA+CDDIG+ +YD VA +++L
Sbjct: 193 PPRLDDQRAALLLALCDDIGQAAYDGEAVAVAFLRLL 229
>gi|159902753|ref|YP_001550097.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9211]
gi|159887929|gb|ABX08143.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9211]
Length = 287
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 149/212 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+LK + +D+VIEVRDARIP+ST+HP +++W+ N+K +LV+NR DM
Sbjct: 6 IQWYPGHIAKAEKQLKKHIDKVDLVIEVRDARIPISTSHPHLEKWITNKKHLLVINRRDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ W +F +G + N + G G + A L ++N +R+S+G+ RAVR
Sbjct: 66 ITNKAIKEWDQWFKSEGKTPWWCNAKNGNGVAMIKEAAIRLGDELNERRKSRGMRSRAVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL +++ ++ R GVT+ L+WVR G+ L+ LD+PG++P R+ +
Sbjct: 126 ALTLGFPNVGKSALINRLTMQKVVESSRRAGVTKSLRWVRLGQQLDLLDAPGVLPPRLEN 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q AA+ LAICDDIG+ +YDV V +++L+
Sbjct: 186 QKAALLLAICDDIGQAAYDVESVGIAFLRLLS 217
>gi|116074039|ref|ZP_01471301.1| GTP-binding protein [Synechococcus sp. RS9916]
gi|116069344|gb|EAU75096.1| GTP-binding protein [Synechococcus sp. RS9916]
Length = 292
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 155/212 (73%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++W+ ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKQNLDKVDLVIEVRDARIPLATGHPHLNRWVKGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ R+AW +F QG ++ + + G G +L + A + +N +RR++G+ PR V
Sbjct: 65 MVTAEARDAWQQWFKSQGQATVWCDAKAGTGVKQLQQAAIRAGNQLNERRRNRGMRPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +YD VA ++ML
Sbjct: 185 DQRAALFLALCDDIGQAAYDGELVAQAFLRML 216
>gi|302853707|ref|XP_002958367.1| hypothetical protein VOLCADRAFT_32516 [Volvox carteri f.
nagariensis]
gi|300256320|gb|EFJ40589.1| hypothetical protein VOLCADRAFT_32516 [Volvox carteri f.
nagariensis]
Length = 287
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 143/199 (71%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+R VQWYPGHIA+ E++LK QL ++DVV+EVRDARIP+ST HP + QW+G + R+L++N
Sbjct: 1 QVRMVQWYPGHIARAERQLKAQLGMVDVVLEVRDARIPISTHHPQIAQWVGVKPRLLLMN 60
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
R D +S D AW +F +V +++G+ G G + + +A+ +N KR +GL P
Sbjct: 61 RADEVSERDLAAWRAHFRATRQQVFWTDGRSGDGVRGVKKELLKVAAQLNAKRAKRGLQP 120
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R VRA ++G+PN+GKS++INRL+ RR +AP+PGVTR L+WVR + L+ LD+PG+IP
Sbjct: 121 RPVRACVIGFPNIGKSAIINRLVNRRAVASAPKPGVTRQLRWVRVDEQLDLLDAPGVIPA 180
Query: 276 RISDQAAAIKLAICDDIGE 294
DQ AA +LA+C+DIGE
Sbjct: 181 SFRDQLAAQRLAMCNDIGE 199
>gi|434398566|ref|YP_007132570.1| ribosome biogenesis GTP-binding protein YlqF [Stanieria
cyanosphaera PCC 7437]
gi|428269663|gb|AFZ35604.1| ribosome biogenesis GTP-binding protein YlqF [Stanieria
cyanosphaera PCC 7437]
Length = 281
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 153/215 (71%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK+L++QLK +DVV+EV DARIP+++ HP + W+G + RILVLNR D
Sbjct: 5 PIQWYPGHIAKAEKQLQEQLKRVDVVLEVLDARIPVASHHPQVADWIGEKPRILVLNRVD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
MI + W T+F ++ K ++N + G G + A+ + +N +RR +G+ PRAV
Sbjct: 65 MIPNETKQEWITWFKERREKPYWTNAKAGKGIKAVKYAAQDAGAAMNQRRRDRGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRL+ R+ +A + GVTR L+WVR ++E LD+PG+IP R+
Sbjct: 125 RAVVIGFPNVGKSALINRLVGRKAVASARKAGVTRQLQWVRISDEIELLDAPGVIPWRLE 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+Q AIKLAIC+DIGE +YD VAA+ V +L +
Sbjct: 185 NQQDAIKLAICEDIGEAAYDNQRVAAVFVDLLVEL 219
>gi|170076707|ref|YP_001733345.1| ribosomal biogenesis GTPase [Synechococcus sp. PCC 7002]
gi|169884376|gb|ACA98089.1| GTPase of unknown function [Synechococcus sp. PCC 7002]
Length = 278
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 98/216 (45%), Positives = 150/216 (69%)
Query: 98 RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRE 157
+P+QWYPGHIAK E++LK+QL +DVV+EV DARIP ++ HP +D+W+G + R++V+NR
Sbjct: 3 QPIQWYPGHIAKAERQLKEQLNRVDVVLEVLDARIPFASHHPQVDEWIGEKPRVVVVNRR 62
Query: 158 DMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
DMI + W ++ Q + +F++ + G G + + A+ +N +R S+G+ PR
Sbjct: 63 DMIPSETLSQWRDWYQAQKIQPVFTDAKKGTGVKGVIKAAQLAGKAMNDRRISRGMRPRP 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
VRA ++G PNVGKS+LINRL+ +++ +A + GVT+ L+WVR +E LD+PG+IP ++
Sbjct: 123 VRAVVMGLPNVGKSALINRLVGKKVVESARKAGVTKQLRWVRISDQIEMLDAPGVIPWKL 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
DQ A+KLAIC+DIG SYD VAA +V +L +
Sbjct: 183 DDQHNAVKLAICEDIGAASYDNQLVAAAMVDLLVEL 218
>gi|359461303|ref|ZP_09249866.1| GTPase YlqF [Acaryochloris sp. CCMEE 5410]
Length = 289
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 152/212 (71%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK L +QLK +DVV+EVRDARIP S+ HP + +W+G++ +LVLNR D
Sbjct: 5 PIQWYPGHIAKAEKALIEQLKKVDVVLEVRDARIPHSSHHPQIQKWIGDKPHVLVLNRID 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+++ W F +G ++ Q G G + + A+ + +N +RRS+G+ PR V
Sbjct: 65 LVTPVSHQLWLDAFKAEGQVPYCTDAQHGKGIKAVIKAAEKVGVSINQRRRSRGMRPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRLLKRR+ +A RPGVTR L+WVR +DLE LD+PG++P +++
Sbjct: 125 RAVVLGFPNVGKSALINRLLKRRIVESARRPGVTRQLRWVRVSQDLELLDTPGVLPAKLN 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+Q AA KLAICDDIG +Y+ VA L++++
Sbjct: 185 NQEAAYKLAICDDIGTAAYENQLVATALIELI 216
>gi|116072000|ref|ZP_01469268.1| GTP-binding protein [Synechococcus sp. BL107]
gi|116065623|gb|EAU71381.1| GTP-binding protein [Synechococcus sp. BL107]
Length = 292
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 155/212 (73%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L+ +D+VIEVRDARIPL+T HP +++WL ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKRNLEKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ AW +F +G + ++ + + G G ++ + A +N +RR++G+ PRAV
Sbjct: 65 MVTKEAWAAWEQWFKAKGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +Y+ VA +Q+L
Sbjct: 185 DQQAALHLALCDDIGQAAYNGELVAQAFLQLL 216
>gi|87123535|ref|ZP_01079386.1| hypothetical protein RS9917_06730 [Synechococcus sp. RS9917]
gi|86169255|gb|EAQ70511.1| hypothetical protein RS9917_06730 [Synechococcus sp. RS9917]
Length = 288
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 154/213 (72%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++L+ L +D+VIEVRDARIP +T HP +++W+ ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLRRHLDKVDLVIEVRDARIPRATGHPHLNRWINGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ R+AW +F QG ++ + + G G +L + A +N +RR++G+ PRAV
Sbjct: 65 MVTAEARDAWQQWFKGQGQSTVWCDAKAGTGVKQLQQAAIRAGDQLNERRRNRGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
DQ AA+ LA+CDDIG+ +YD A +++LA
Sbjct: 185 DQRAALHLALCDDIGQAAYDGEWAAQSFLRLLA 217
>gi|78185709|ref|YP_378143.1| ribosomal biogenesis GTPase [Synechococcus sp. CC9902]
gi|78170003|gb|ABB27100.1| Ras superfamily GTP-binding protein YlqF [Synechococcus sp. CC9902]
Length = 292
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 155/212 (73%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L+ +D+VIEVRDARIPL+T HP +++WL ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKRNLEKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ AW +F +G + ++ + + G G ++ + A +N +RR++G+ PRAV
Sbjct: 65 MVTKEAWAAWEQWFKAKGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRAV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +Y+ VA +Q+L
Sbjct: 185 DQQAALHLALCDDIGQAAYNGELVAQAFLQLL 216
>gi|148240685|ref|YP_001226072.1| ribosomal biogenesis GTPase [Synechococcus sp. WH 7803]
gi|147849224|emb|CAK24775.1| Predicted GTPase [Synechococcus sp. WH 7803]
Length = 288
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 154/212 (72%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++W+ ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKRNLDKVDLVIEVRDARIPLATGHPHLNRWISGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ A R AW +F +G + ++ + + G G ++ + A +N +RR++G+ PR V
Sbjct: 65 MVTPAARVAWEAWFKARGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +YD VA + +L
Sbjct: 185 DQQAALHLALCDDIGQAAYDGELVAQAFLNLL 216
>gi|88809815|ref|ZP_01125321.1| hypothetical protein WH7805_10578 [Synechococcus sp. WH 7805]
gi|88786199|gb|EAR17360.1| hypothetical protein WH7805_10578 [Synechococcus sp. WH 7805]
Length = 289
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 153/212 (72%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++W+ ++ +LV+NR D
Sbjct: 5 PIQWYPGHIAKAEQQLKRNLDKVDLVIEVRDARIPLATGHPHLNRWINGKQHLLVINRRD 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
M++ R AW +F +G + ++ + + G G ++ + A +N +RR++G+ PR V
Sbjct: 65 MVTSEARVAWEAWFKARGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+
Sbjct: 125 RALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ AA+ LA+CDDIG+ +YD VA + +L
Sbjct: 185 DQQAALHLALCDDIGQAAYDGELVAQAFLNLL 216
>gi|218248810|ref|YP_002374181.1| ribosomal biogenesis GTPase [Cyanothece sp. PCC 8801]
gi|218169288|gb|ACK68025.1| GTP1/OBG protein [Cyanothece sp. PCC 8801]
Length = 281
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 150/214 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K E++LK+QL +DVV+EV DARIPL++ HP + QW+G + RILV+NR DM
Sbjct: 4 IQWYPGHISKAERQLKEQLNRVDVVLEVLDARIPLASHHPQIPQWIGQKPRILVINRVDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + R W ++F F+N + G G + + A+ +N +RR +G+ PR VR
Sbjct: 64 IPESVRQQWLSWFTHNNETPYFTNAKQGTGVKAILKAAQQTGVAMNERRRDRGMRPRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+LINRLL R++ +A R GVTR L+WVR + +E LDSPG+IP ++ +
Sbjct: 124 AVVIGMPNVGKSALINRLLGRKIVESARRAGVTRQLRWVRISEAIELLDSPGVIPGKLEN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A KLAIC+DIGE +YD ++AAILV +L +
Sbjct: 184 QKDAAKLAICEDIGEAAYDNQEMAAILVDLLVEL 217
>gi|318040687|ref|ZP_07972643.1| GTPase YlqF [Synechococcus sp. CB0101]
Length = 321
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 152/212 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ L L +D+VIEVRDARIP +T HP + +W+ ++ +LVLNR DM
Sbjct: 12 IQWYPGHIAKAERSLTGNLAKVDLVIEVRDARIPTATGHPRLQRWISGKQHLLVLNRRDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I A ++AW +F QG +S+ + G G +L + A +N +RRS+G+ PR VR
Sbjct: 72 IPKAAQDAWDAWFRSQGQTPWWSDAKAGTGVKQLQQAAIRAGDALNERRRSRGMRPRPVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 132 ALMLGFPNVGKSALINRLVRQKVVDSARRAGVTRSLRWVRLGQDLDLLDAPGVLPPRLDD 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q AA++LA+CDDIG+ +YD VA VQMLA
Sbjct: 192 QLAALRLALCDDIGQAAYDGEAVAMAFVQMLA 223
>gi|158335763|ref|YP_001516935.1| ribosomal biogenesis GTPase [Acaryochloris marina MBIC11017]
gi|158306004|gb|ABW27621.1| GTP binding domain protein [Acaryochloris marina MBIC11017]
Length = 291
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 151/212 (71%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QWYPGHIAK EK L +QLK +DVV+EVRDARIP S+ HP + +W+G++ +LVLNR D
Sbjct: 5 PIQWYPGHIAKAEKALIEQLKKVDVVLEVRDARIPHSSHHPQIQKWIGDKPHVLVLNRID 64
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+++ W +G ++ Q G G + + A+ + +N +RR++G+ PR V
Sbjct: 65 LVTPVSHQLWLDALKAEGQVPHCTDAQHGKGIKAVIKAAEKVGVSINQRRRNRGMRPRPV 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G+PNVGKS+LINRLLKRR+ +A RPGVTR L+WVR +DLE LD+PG++P +++
Sbjct: 125 RAVVLGFPNVGKSALINRLLKRRIVESARRPGVTRQLRWVRVSQDLELLDTPGVLPAKLN 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+Q AA KLAICDDIG +Y+ VA L++++
Sbjct: 185 NQEAAYKLAICDDIGTAAYENQLVATALIELI 216
>gi|78778582|ref|YP_396694.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9312]
gi|78712081|gb|ABB49258.1| Ras superfamily GTP-binding protein YlqF [Prochlorococcus marinus
str. MIT 9312]
Length = 290
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 150/212 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+L + + +D+VIEVRDARIPLST HP +++W+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHIAKAEKKLSEIINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRSDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS N+W +F + ++ + + G+G ++ + AK S ++ +R S+G+ R +R
Sbjct: 66 ISHNTINSWNNWFNAKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDDRRLSRGMRIRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+R+ +A + GVTR L+W++ ++ LD+PG+IP + D
Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLDSGIDLLDAPGVIPPNLED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +A+ LA+CDDIGE +Y++ VA +++++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFIKIIS 217
>gi|317968171|ref|ZP_07969561.1| GTPase YlqF [Synechococcus sp. CB0205]
Length = 306
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 150/211 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E+ L D L +D+VIEVRDARIP +T HP + +W+ ++ +LVLNR DM
Sbjct: 19 IQWYPGHIAKAERALTDNLAKVDLVIEVRDARIPTATGHPRLQRWIQGKQHLLVLNRRDM 78
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I +A R AW +F QG +S+ + G G +L + A +N +RR++G+ PR VR
Sbjct: 79 IPVAAREAWDAWFRGQGQTPWWSDAKAGTGVKQLQQAAIRAGDSLNERRRNRGMRPRPVR 138
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 139 ALMLGFPNVGKSALINRLVRQKVVDSARRAGVTRSLRWVRLGQDLDLLDAPGVLPPRLDD 198
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA++LA+CDDIG+ +YD A V ML
Sbjct: 199 QLAALRLALCDDIGQAAYDGEAAAMAFVHML 229
>gi|33866857|ref|NP_898416.1| ribosomal biogenesis GTPase [Synechococcus sp. WH 8102]
gi|33639458|emb|CAE08842.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 288
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 147/199 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L L +D+VIEVRDARIPL+T HP +D+WL ++ +LV+NR DM
Sbjct: 6 IQWYPGHIAKAEQQLSRHLDKVDLVIEVRDARIPLATGHPHLDRWLKGKQHLLVINRRDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ A R AW +F +G + ++ + + G G ++ + A +N +RR++G+ PR VR
Sbjct: 66 VTPAAREAWEAWFKGRGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL+K+++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 126 ALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
Query: 280 QAAAIKLAICDDIGERSYD 298
Q AA+ LA+CDDIG+ +YD
Sbjct: 186 QQAALHLALCDDIGQAAYD 204
>gi|427723164|ref|YP_007070441.1| Ras superfamily GTP-binding protein YlqF [Leptolyngbya sp. PCC
7376]
gi|427354884|gb|AFY37607.1| Ras superfamily GTP-binding protein YlqF [Leptolyngbya sp. PCC
7376]
Length = 278
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 147/213 (69%)
Query: 98 RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRE 157
+P+QWYPGHIAK E++LK+QL +DVV+EV DARIP ++ HP D+W+ ++ R++V+NR
Sbjct: 3 QPIQWYPGHIAKAERQLKEQLNRVDVVLEVLDARIPYASHHPQFDEWVQDKPRVIVVNRR 62
Query: 158 DMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
DMI W ++ Q + +F++ Q G G + + A+ +N +R S+G+ PR
Sbjct: 63 DMIPSETLTQWRDWYQSQKLQPVFTDAQKGKGVKGVIKAAQIAGKAMNDRRISRGMKPRP 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
VRA ++G PNVGKS+LINRL+ +++ +A + G+T+ L+WVR +E LD+PG+IP ++
Sbjct: 123 VRAVVMGLPNVGKSALINRLVGKKVVASARKAGITKQLRWVRISDQIEMLDAPGVIPWKL 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+Q AIKLAIC+DIG SYD VA LV++L
Sbjct: 183 DNQENAIKLAICEDIGAASYDNELVAQALVKLL 215
>gi|123967749|ref|YP_001008607.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. AS9601]
gi|123197859|gb|ABM69500.1| Predicted GTPases [Prochlorococcus marinus str. AS9601]
Length = 290
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 150/212 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+L + + +D+VIEVRDARIPLST HP +++W+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHIAKAEKKLSEVINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRSDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS N+W +F + ++ + + G+G ++ + AK S ++ +R S+G+ R +R
Sbjct: 66 ISPNTINSWNKWFNSKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDDRRLSRGMRIRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+R+ +A + GVTR L+W++ ++ LD+PG+IP + D
Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLESGIDLLDAPGVIPPNLED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +A+ LA+CDDIGE +Y++ VA +++++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIGFIKIIS 217
>gi|254527063|ref|ZP_05139115.1| hypothetical protein P9202_1716 [Prochlorococcus marinus str. MIT
9202]
gi|221538487|gb|EEE40940.1| hypothetical protein P9202_1716 [Prochlorococcus marinus str. MIT
9202]
Length = 290
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 151/212 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHI+K EK+L + + +D+VIEVRDARIP+ST HP +++W+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHISKAEKKLSEVINKVDLVIEVRDARIPMSTGHPHLNKWINNKKHILVINRSDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS N+W +F + ++ + + G+G ++ + AK S ++ +R S+G+L R +R
Sbjct: 66 ISPNTINSWNKWFNAKDQYPLWCDAKKGIGIKEICKSAKESRSSIDERRLSRGMLIRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+R+ +A + GVTR L+W++ ++ LD+PG+IP + D
Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLEIGIDLLDAPGVIPPNLED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +A+ LA+CDDIGE +Y++ VA +++++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIGFIKIIS 217
>gi|126695552|ref|YP_001090438.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9301]
gi|126542595|gb|ABO16837.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9301]
Length = 290
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 150/212 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+L + + +D+VIEVRDARIPLST HP +++W+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHIAKAEKKLSEVINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRSDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+S N+W +F + ++ + + G+G ++ + AK S ++ +R S+G+ R +R
Sbjct: 66 VSPHTINSWNKWFNAKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDDRRLSRGMRIRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+R+ +A + GVTR L+W++ ++ LD+PG+IP + D
Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLESGIDLLDAPGVIPPNLED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +A+ LA+CDDIGE +Y++ VA +++++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFIKIIS 217
>gi|443328436|ref|ZP_21057033.1| ribosome biogenesis GTP-binding protein YlqF [Xenococcus sp. PCC
7305]
gi|442791890|gb|ELS01380.1| ribosome biogenesis GTP-binding protein YlqF [Xenococcus sp. PCC
7305]
Length = 280
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 152/214 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK+QLK +DVV+EVRDARIPL++ HP + W+G + ++ +LNR DM
Sbjct: 6 IQWYPGHIAKAERQLKEQLKRVDVVLEVRDARIPLASHHPQVADWIGEKPKVSILNRMDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I + + W +F Q TK F+N + G G + A+A +N +RR +G+ PR VR
Sbjct: 66 IPESVQKQWLEWFKAQETKTYFTNAKKGKGIKAVKTAAQAAGVAMNQRRRDRGMRPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+ ++ + R GVTR L+WVR +++E LD+PG+IP ++ +
Sbjct: 126 AVVIGFPNVGKSALINRLVGKKAVVSERRAGVTRQLRWVRMSQEIELLDAPGVIPWKLYN 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+KLAIC+DIG+ SYD VAA +V ++ ++
Sbjct: 186 QENAVKLAICEDIGQASYDNQLVAAAMVDLIMKL 219
>gi|37523435|ref|NP_926812.1| ribosomal biogenesis GTPase [Gloeobacter violaceus PCC 7421]
gi|35214439|dbj|BAC91807.1| glr3866 [Gloeobacter violaceus PCC 7421]
Length = 296
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 142/211 (67%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK ++L +QLK +D+V+EV DARI S+ H + + G R R++VLNR DM
Sbjct: 9 IQWYPGHIAKARRQLAEQLKQVDLVLEVLDARIAHSSRHDEIQKLAGERPRLVVLNRADM 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I +W +FA +G +N Q G G + + A+ A VN +R +G+ PRAVR
Sbjct: 69 IPQGMLRSWLKWFAARGEAAYPTNAQNGDGVRAVLKAAQQGAVAVNQRRAGRGMRPRAVR 128
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G+PNVGKS+LINRL+ +R +A +PGVTR L+WVR ++ LDSPGI+P R++D
Sbjct: 129 VAVIGFPNVGKSALINRLVGKRAVESAAKPGVTRALRWVRIADVIDLLDSPGILPPRLND 188
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA KLAICDDIG+ +Y + VA + ++L
Sbjct: 189 QRAAAKLAICDDIGQAAYTTSRVATLAAELL 219
>gi|157412551|ref|YP_001483417.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9215]
gi|157387126|gb|ABV49831.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9215]
Length = 290
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 150/212 (70%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+L + + +D+VIEVRDARIPLST HP +++W+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHIAKAEKKLSEVINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRLDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS N+W +F + ++ + + G+G ++ + AK S ++ +R S+G+ R +R
Sbjct: 66 ISPNTINSWNKWFNAKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDERRLSRGMRIRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+R+ +A + GVTR L+W++ ++ LD+PG+IP + D
Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLEIGIDLLDAPGVIPPNLED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +A+ LA+CDDIGE +Y++ VA +++++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIGFIKIIS 217
>gi|78213966|ref|YP_382745.1| ribosomal biogenesis GTPase [Synechococcus sp. CC9605]
gi|78198425|gb|ABB36190.1| GTP-binding [Synechococcus sp. CC9605]
Length = 288
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 155/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++WL ++ +LV+NR DM
Sbjct: 6 IQWYPGHIAKAEQQLKRHLDKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ A + AW +F QG K ++ + + G G ++ + A +N +RR++G+ PR VR
Sbjct: 66 VTAAAKEAWEAWFKAQGQKTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 126 ALTLGFPNVGKSALINRLVRQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA++LA+CDDIG+ +YD VA +Q+L
Sbjct: 186 QQAALRLALCDDIGQAAYDGELVAQAFLQLL 216
>gi|33864372|ref|NP_895932.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9313]
gi|33641152|emb|CAE22282.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313]
Length = 296
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 150/211 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L L +D+VIEVRDARIP++T HP + +W+ ++ +LV+NR DM
Sbjct: 13 IQWYPGHIAKAEQQLSKNLDKIDLVIEVRDARIPIATAHPQLQRWIKGKQHLLVINRRDM 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS A R +W +F Q + + + G G ++ + A +N +RRS+G+ PR VR
Sbjct: 73 ISSAARQSWDRWFRDQAQTPWWCDAKAGTGVKQVQQAAIRAGDQLNQRRRSRGMRPRPVR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 133 ALTLGFPNVGKSALINRLVRQKVVESARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+ LA+CDDIG+ +YDV VA L++ L
Sbjct: 193 QQAALHLALCDDIGQAAYDVELVALALLETL 223
>gi|33860754|ref|NP_892315.1| ribosomal biogenesis GTPase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633696|emb|CAE18653.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 288
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 147/214 (68%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+L + + +D+VIEVRDARIPLST HP ++QW+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHIAKAEKKLTEVINRVDLVIEVRDARIPLSTGHPHLNQWIRNKKHILVINRADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS W +F K ++ + + G G ++ + AK ++ KR S+G+ R +R
Sbjct: 66 ISTETITNWNKWFKKDNIYPLWCDAKNGKGIKEICKSAKESRLSIDNKRLSRGMKVRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+++ +A + GVTR L+W+R ++ LD+PG+IP + +
Sbjct: 126 ALTLGFPNVGKSALINRIAKKKVVESARKAGVTRNLRWIRLDNGIDLLDAPGVIPPNLEN 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +A+ LA+CDDIGE +Y++ VA ++++ ++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFIKIIFKL 219
>gi|124024487|ref|YP_001018794.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9303]
gi|123964773|gb|ABM79529.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9303]
Length = 289
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 151/212 (71%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L L +D+VIEVRDARIP++T HP + +W+ ++ +LV+NR DM
Sbjct: 6 IQWYPGHIAKAEQQLSKNLDKIDLVIEVRDARIPIATAHPQLQRWIKGKQHLLVINRRDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS A R +W +F Q + + + G G ++ + A +N +RRS+G+ PR VR
Sbjct: 66 ISSAARQSWDRWFRDQAQTPWWCDAKAGTGVKQVQQAAIRAGDQLNQRRRSRGMRPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 126 ALTLGFPNVGKSALINRLVRQKVVESARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q AA+ LA+CDDIG+ +YDV VA L++ L+
Sbjct: 186 QQAALHLALCDDIGQAAYDVELVALALLETLS 217
>gi|194476822|ref|YP_002049001.1| hypothetical protein PCC_0350 [Paulinella chromatophora]
gi|171191829|gb|ACB42791.1| hypothetical protein PCC_0350 [Paulinella chromatophora]
Length = 309
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 151/217 (69%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L L +D+VIEVRDAR+P S+ +P + +W +++ +LV+NR+DM
Sbjct: 19 IQWYPGHIAKAERQLFSSLDKVDLVIEVRDARVPFSSGYPDLKKWFLDKQYLLVINRQDM 78
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
IS + W + G ++ N ++G G +L +A +N +R+++G+ PR VR
Sbjct: 79 ISESAMKCWDWWLRSIGEAPLWCNARIGTGVKQLQLVAIQAGDIINERRQNRGMKPRRVR 138
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G+PNVGKS+LINRL+++++ +A R G+TR L W+R ++L+ LDSPG++P ++ D
Sbjct: 139 AIVLGFPNVGKSALINRLVRKKIAVSARRAGITRSLNWIRVSEELDLLDSPGVLPPKLED 198
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPTV 316
Q A+ LAICD+IGE SY+ +VA L+Q+L ++ +
Sbjct: 199 QRGALLLAICDNIGEASYNKEEVAIGLLQVLQQLSVI 235
>gi|260434269|ref|ZP_05788239.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. WH
8109]
gi|260412143|gb|EEX05439.1| ribosome biogenesis GTP-binding protein YlqF [Synechococcus sp. WH
8109]
Length = 288
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 155/211 (73%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++LK L +D+VIEVRDARIPL+T HP +++WL ++ ++V+NR DM
Sbjct: 6 IQWYPGHIAKAEQQLKRHLDKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLMVINRRDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ A + AW +F QG + ++ + + G G ++ + A +N +RR++G+ PR VR
Sbjct: 66 VTAAAKEAWEAWFKAQGQRTVWCDAKAGTGVKQVQQAAIRAGDHLNERRRNRGMRPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+DL+ LD+PG++P R+ D
Sbjct: 126 ALTLGFPNVGKSALINRLVRQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA++LA+CDDIG+ +YD VA +Q+L
Sbjct: 186 QQAALRLALCDDIGQAAYDGELVAQAFLQLL 216
>gi|148243330|ref|YP_001228487.1| ribosomal biogenesis GTPase [Synechococcus sp. RCC307]
gi|147851640|emb|CAK29134.1| Predicted GTPase [Synechococcus sp. RCC307]
Length = 287
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 147/211 (69%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L L +D+VIEVRDARIP++T HP + +W+ ++ +LV+NR DM
Sbjct: 6 IQWYPGHIAKAEQQLTQHLSKVDLVIEVRDARIPMATGHPHLQRWIKGKQHLLVINRRDM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+S R AW +F QG + + + G G ++ + A +N +RR +G+ PR VR
Sbjct: 66 VSAQARQAWDEWFRSQGQTPWWCDAKAGTGVKQVQQAAIRAGEQLNERRRKRGMRPRPVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINRL+++++ +A R GVTR L+WVR G+ L+ LD+PG++P R+ +
Sbjct: 126 ALTLGFPNVGKSALINRLVRQKVVDSARRAGVTRTLRWVRLGQSLDLLDAPGVLPPRLDN 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+ LA+CDDIG+ +YD VA ++ML
Sbjct: 186 QQAALHLALCDDIGQAAYDGEGVALAFLEML 216
>gi|449015964|dbj|BAM79366.1| GTP-binding protein of Nug1 family [Cyanidioschyzon merolae strain
10D]
Length = 434
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 15/218 (6%)
Query: 102 WYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMIS 161
W+PGHIAK +EL+D+L L+DVVIEV DARIP +T + LG + R++ LNR DM+
Sbjct: 130 WFPGHIAKAMRELRDRLSLIDVVIEVVDARIPRTTFPQFVHDILGTKSRVIALNRTDMVP 189
Query: 162 MA--------------DRNAWATYFAKQGTKVIF-SNGQLGMGTMKLSRLAKALASDVNV 206
+A DR + A+ Q + ++G+LG G +L R A VN
Sbjct: 190 VAASRHWLAAFRRGALDRASAASQVEHQANAPCYPTDGKLGTGIPQLRRACIAAGKTVNE 249
Query: 207 KRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEF 266
+R +GLL R +R ++GYPNVGKS++INRL RR +A RPGVTR L+WVR +DLE
Sbjct: 250 RRARRGLLSRPIRVAVIGYPNVGKSAVINRLCNRRAAVSAARPGVTRQLQWVRIAQDLEL 309
Query: 267 LDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAA 304
LD+PG+IP ++ +Q AA +LA+CDDIGE +YDV +A+
Sbjct: 310 LDTPGVIPPKLEEQDAASRLAMCDDIGETAYDVERIAS 347
>gi|123965458|ref|YP_001010539.1| ribosomal biogenesis GTPase [Prochlorococcus marinus str. MIT 9515]
gi|123199824|gb|ABM71432.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9515]
Length = 288
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 147/214 (68%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK EK+L + +D++IEVRDARIPLST HP ++QW+ N+K ILV+NR DM
Sbjct: 6 IQWYPGHIAKAEKKLSAVISRVDLIIEVRDARIPLSTGHPHLNQWITNKKHILVINRADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
I+ W T+F K ++ + + G G ++ + AK ++ +R S+G+ R +R
Sbjct: 66 IAPETIINWNTWFKKYDIYPLWCDAKNGKGIKEICKSAKESRLSIDKRRLSRGMKVRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G+PNVGKS+LINR+ K+++ +A + GVTR L+W+R ++ LD+PG+IP + +
Sbjct: 126 ALTLGFPNVGKSALINRIAKKKVVESARKAGVTRNLRWIRLDGGIDLLDAPGVIPPNLEN 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +A+ LA+CDDIGE +Y++ VA ++++ ++
Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFLKIIFKL 219
>gi|428178520|gb|EKX47395.1| hypothetical protein GUITHDRAFT_55778, partial [Guillardia theta
CCMP2712]
Length = 285
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRK--RILVLNRE 157
+ WYPGHIAK EK L+D L +DVV+EVRDARIP+ST+HP++D WL NRK RI+ +++
Sbjct: 1 ISWYPGHIAKAEKVLQDVLSAVDVVVEVRDARIPISTSHPMIDNWLKNRKATRIICMSKV 60
Query: 158 DMISMADRNAWATYFAK-QGTKVIFSNGQLGM-GTMKLSRLAKALASDVNVKRRSKGLLP 215
DM+ + + W + T V+F N + G G + L R K VN +R +G+ P
Sbjct: 61 DMVPASSISMWKAFLENSMNTSVVFMNCKEGGDGLIHLKRAIKKEREKVNTRREERGIAP 120
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-GKDLEFLDSPGIIP 274
R V+ ++GYPNVGKS+L+NRL + + R GVT+ L+W R G DL LDSPGIIP
Sbjct: 121 RNVKVAVIGYPNVGKSALLNRLAGMKKAKSENRAGVTKSLQWSRVEGYDL--LDSPGIIP 178
Query: 275 MRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
++ Q A+ LAICDDIG+ SYD VAA LV + ++
Sbjct: 179 AKLLTQEIALHLAICDDIGKASYDTILVAAHLVDEIRKV 217
>gi|298714676|emb|CBJ27601.1| PYlqF, plastid YlqF/RbgA-like GTPase [Ectocarpus siliculosus]
Length = 542
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 177/331 (53%), Gaps = 59/331 (17%)
Query: 28 TKPSTTSLASSASL---SSSLSSSAPIIQTVGGKQ------------------------- 59
T PS ++ +S+ L S++L+ SA + VGG
Sbjct: 79 TMPSASAFTASSVLLSPSTALAGSA-ASRVVGGASGLRRRGQQQQQQQHGGRRVTGRGGL 137
Query: 60 --SSWHGGNSNNSNG-SIEAYEEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKD 116
+ G + +G +I+ ++E ++A + + WYPGHIAK E++L+D
Sbjct: 138 STAVMAAGWRDKEDGPAIDPFDE----GKMNAQGQHV------INWYPGHIAKAERQLQD 187
Query: 117 QLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQG 176
L ++DVV+EVRD RIP +TTH L+ W+G R I+VLNR D S W Y +G
Sbjct: 188 YLNMVDVVVEVRDCRIPAATTHQLVPSWVGKRPLIVVLNRVDTASPTAVEQWKKYLVAEG 247
Query: 177 ----------TKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
V F + + G G ++ + A S VN +R +G+ PR+VR ++G+P
Sbjct: 248 GLRADNRGGNVPVFFVDSKRGRGVHEIKKAALKAGSRVNDRRVRRGMNPRSVRVAVIGFP 307
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFG-------KDLEFLDSPGIIPMRISD 279
NVGKS+LINRL+ +++ + +PGVT+ + WVR G ++LE LDSPGIIP R D
Sbjct: 308 NVGKSALINRLIGKKVAKSMNKPGVTKKMNWVRLGGKDTKPEQNLELLDSPGIIPARQED 367
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLAIC+DIG+ SYD VAA ++ L
Sbjct: 368 QNQALKLAICNDIGQASYDTQVVAAKMIDQL 398
>gi|15615039|ref|NP_243342.1| hypothetical protein BH2476 [Bacillus halodurans C-125]
gi|4514314|dbj|BAA75361.1| YlqF [Bacillus halodurans]
gi|10175096|dbj|BAB06195.1| BH2476 [Bacillus halodurans C-125]
Length = 284
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 141/211 (66%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DVVIE+ DAR+PLS+ +P+MD+ + ++ R+++LN++D+
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDVVIELLDARVPLSSRNPMMDEIVAHKPRLVLLNKDDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F + G V+ N Q G G ++S + LA + K+R+KG+ PRA+R
Sbjct: 63 ADPSKTKEWTRFFEEGGATVLPINAQTGQGVSRISPACQTLAQALIEKQRAKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL +R+ RPG+T+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLASKRIAKVGDRPGITKQQQWIKVGKELELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +LA I + D DVA +++ +
Sbjct: 183 QATGFRLAATGAIKDELLDFQDVALFVLRYM 213
>gi|223994459|ref|XP_002286913.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978228|gb|EED96554.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 287
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 137/220 (62%), Gaps = 11/220 (5%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V WYPGHIAK E++L + LK +DVVIEVRD+R P +T HP + +W R R++VL R D
Sbjct: 3 VNWYPGHIAKAERQLSETLKSVDVVIEVRDSRAPKATAHPSVGKWTAGRPRVVVLTRMDT 62
Query: 160 ISMADRNAWATYFAKQGT---------KVIFSNGQLGMGTMKLSRLAKALASDVNVKRRS 210
++ R++W + + G +++F + + G GT +SR VN +R+
Sbjct: 63 VTSRSRDSWREAYERLGADRWEDSLVEEILFVDAKRGQGTHAISRAVYKAGRHVNERRKR 122
Query: 211 KGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSP 270
+GL R +R GI+G+PNVGKS+LINRLL ++ A PG+TR L+W+R G E LDSP
Sbjct: 123 RGLNDRPLRVGIIGFPNVGKSALINRLLGKKRARTANTPGITRSLQWIRSG--FELLDSP 180
Query: 271 GIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
GIIP + DQ+ A+ LA C+ IG +YD VAA L + +
Sbjct: 181 GIIPSDMLDQSDALLLAACNSIGVGAYDNQAVAAYLCERI 220
>gi|402300897|ref|ZP_10820338.1| hypothetical protein BalcAV_17028 [Bacillus alcalophilus ATCC
27647]
gi|401723983|gb|EJS97390.1| hypothetical protein BalcAV_17028 [Bacillus alcalophilus ATCC
27647]
Length = 287
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +QLK++DVVIE+ DARIPLS+ +P++D+ + ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVTEQLKMIDVVIELVDARIPLSSRNPMIDKLVEHKPRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +YF K G V+ N Q G GT K+S + LA+ + K ++KG+ PRA+R
Sbjct: 63 ADESRTAKWKSYFEKLGYSVLVINSQNGKGTEKISGECQKLATPMLEKMKAKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL +R RPGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAAKRTAQVGDRPGVTKRQQWIKVGKQLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +LA I + D D+A V L
Sbjct: 183 QQTGFRLAATGAIKDEILDFQDIALFAVTYL 213
>gi|317129226|ref|YP_004095508.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus
cellulosilyticus DSM 2522]
gi|315474174|gb|ADU30777.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus
cellulosilyticus DSM 2522]
Length = 282
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 141/212 (66%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++++LK++DVVIE+ DAR+PLS+ +P++D+ + ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMAKAKRQVQEKLKVIDVVIELVDARVPLSSRNPMIDELVKSKPRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF +G V N Q G G K+ + + LA + K R+KG+ PRAVR
Sbjct: 63 ADQKVTDLWVKYFETKGFAVQQINAQKGTGVKKIPAIVEKLAKPITDKMRAKGMNPRAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS++INRL +R+ +PGVT+ +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALILGIPNVGKSTIINRLANKRIATVGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
++ +LA+ I E +D + L++ LA
Sbjct: 183 ESVGFRLALTGAIKEELFDFNETTLFLLRYLA 214
>gi|386053525|ref|YP_005971083.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes Finland 1998]
gi|346646176|gb|AEO38801.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes Finland 1998]
Length = 287
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 138/211 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTNEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + ++A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFL 213
>gi|288553082|ref|YP_003425017.1| hypothetical protein BpOF4_00280 [Bacillus pseudofirmus OF4]
gi|288544242|gb|ADC48125.1| hypothetical protein BpOF4_00280 [Bacillus pseudofirmus OF4]
Length = 285
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DVVIE+ DAR+PLS+ +P+MD+ +G + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDVVIELVDARLPLSSRNPMMDEIVGQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
WA YF ++G V+ N Q G G K+S + LAS + K +SKG+ PRA+R
Sbjct: 63 ADPHMTKKWAGYFEEKGATVLAINAQTGKGVEKISGACRKLASPLIEKWKSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKD-LEFLDSPGIIPMRIS 278
I+G PNVGKS+LINRL +++ RPGVT+ +W++ G D LE LD+PGI+ +
Sbjct: 123 GMILGIPNVGKSTLINRLASKKIAKVGDRPGVTKKQQWIKVGNDELELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ +LA I + D D+A ++ +
Sbjct: 183 DQVIGYRLAATGAIKDELLDFQDIALFVLNYM 214
>gi|422409470|ref|ZP_16486431.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes FSL F2-208]
gi|313609087|gb|EFR84797.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes FSL F2-208]
Length = 287
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + D+A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEDIAGYGLRFL 213
>gi|217964585|ref|YP_002350263.1| ribosomal biogenesis GTPase [Listeria monocytogenes HCC23]
gi|290894531|ref|ZP_06557481.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J2-071]
gi|386008041|ref|YP_005926319.1| GTPase family protein [Listeria monocytogenes L99]
gi|386026640|ref|YP_005947416.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|404407706|ref|YP_006690421.1| GTPase family protein [Listeria monocytogenes SLCC2376]
gi|217333855|gb|ACK39649.1| GTPase family protein [Listeria monocytogenes HCC23]
gi|290555912|gb|EFD89476.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J2-071]
gi|307570851|emb|CAR84030.1| GTPase family protein [Listeria monocytogenes L99]
gi|336023221|gb|AEH92358.1| putative ribosome biogenesis GTP-binding protein [Listeria
monocytogenes M7]
gi|404241855|emb|CBY63255.1| GTPase family protein [Listeria monocytogenes SLCC2376]
Length = 287
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + D+A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEDIAGYGLRFL 213
>gi|406983198|gb|EKE04440.1| Ribosome biogenesis GTP-binding protein YlqF [uncultured bacterium]
Length = 283
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 136/212 (64%), Gaps = 1/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGHIAK E++L++Q L+DV++E+ DARIPLS+++ +++ N+ R+LV+N+ D+
Sbjct: 4 IQWYPGHIAKAERKLQEQTALVDVILEIIDARIPLSSSYFGIEKLTRNKPRLLVMNKADL 63
Query: 160 ISMADRNAWATYFA-KQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+ W Y A K G KV+ +N L + A L K +KG +PR V
Sbjct: 64 ADPELNSKWRDYMADKTGLKVVLTNSNSSKDISTLIKTAIELGRPEIEKLVAKGRMPRPV 123
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G PNVGKSS+IN+L+K P+ GVTR +W+R LEF+D+PGIIPM++
Sbjct: 124 RAMAIGMPNVGKSSIINKLVKTAKAKVGPKAGVTRAAQWIRINPKLEFMDTPGIIPMKLD 183
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+Q A+KLA+ + I E +YD+ ++A LV +L
Sbjct: 184 NQERAVKLAVVNSISENAYDLVEIAQELVNIL 215
>gi|423100352|ref|ZP_17088059.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua ATCC
33091]
gi|370793353|gb|EHN61191.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua ATCC
33091]
Length = 288
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 4 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 64 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFERLRSKGMKPRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 124 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 184 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEK 216
>gi|422415767|ref|ZP_16492724.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua FSL
J1-023]
gi|313623978|gb|EFR94077.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua FSL
J1-023]
Length = 287
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFERLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEK 215
>gi|116872705|ref|YP_849486.1| ribosomal biogenesis GTPase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741583|emb|CAK20707.1| GTPase family protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 287
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA +G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFADKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + D+A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEDIAGYGLRFLEK 215
>gi|16800379|ref|NP_470647.1| ribosomal biogenesis GTPase [Listeria innocua Clip11262]
gi|422412731|ref|ZP_16489690.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua FSL
S4-378]
gi|16413784|emb|CAC96542.1| lin1311 [Listeria innocua Clip11262]
gi|313619217|gb|EFR90980.1| ribosome biogenesis GTP-binding protein YlqF [Listeria innocua FSL
S4-378]
Length = 287
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFERLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEK 215
>gi|289434556|ref|YP_003464428.1| HSR1-related GTPase [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289170800|emb|CBH27342.1| HSR1-related GTPase family protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 287
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEK 215
>gi|169827105|ref|YP_001697263.1| hypothetical protein Bsph_1533 [Lysinibacillus sphaericus C3-41]
gi|168991593|gb|ACA39133.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 290
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 139/212 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DAR+PLS+ +P++D+ + + R+LVLN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDIIFELIDARLPLSSRNPMIDEVINQKPRLLVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YFA++G K + N G G ++++ A+ + + + ++KG+ PRA+R
Sbjct: 63 ADEQETRKWVEYFAQRGHKAVAINSLEGKGLQQVTKAAQEILKEKFDRMKAKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q KLA+ I + ++ D+A ++ L+
Sbjct: 183 QEVGFKLALTGAIKDTITNMEDLAVYGLRFLS 214
>gi|422418869|ref|ZP_16495824.1| ribosome biogenesis GTP-binding protein YlqF [Listeria seeligeri
FSL N1-067]
gi|422421929|ref|ZP_16498882.1| ribosome biogenesis GTP-binding protein YlqF [Listeria seeligeri
FSL S4-171]
gi|313633473|gb|EFS00297.1| ribosome biogenesis GTP-binding protein YlqF [Listeria seeligeri
FSL N1-067]
gi|313638163|gb|EFS03419.1| ribosome biogenesis GTP-binding protein YlqF [Listeria seeligeri
FSL S4-171]
Length = 287
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEK 215
>gi|46907499|ref|YP_013888.1| ribosomal biogenesis GTPase [Listeria monocytogenes serotype 4b
str. F2365]
gi|47093920|ref|ZP_00231659.1| GTPase family protein [Listeria monocytogenes str. 4b H7858]
gi|226223875|ref|YP_002757982.1| hypothetical protein Lm4b_01282 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254824667|ref|ZP_05229668.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-194]
gi|254852674|ref|ZP_05242022.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-503]
gi|254932411|ref|ZP_05265770.1| ribosomal biogenesis GTPase [Listeria monocytogenes HPB2262]
gi|255520254|ref|ZP_05387491.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-175]
gi|300765308|ref|ZP_07075292.1| GTPase family protein [Listeria monocytogenes FSL N1-017]
gi|386732012|ref|YP_006205508.1| GTPase YlqF [Listeria monocytogenes 07PF0776]
gi|404280827|ref|YP_006681725.1| GTPase family protein [Listeria monocytogenes SLCC2755]
gi|404286688|ref|YP_006693274.1| GTPase family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405749616|ref|YP_006673082.1| GTPase family protein [Listeria monocytogenes ATCC 19117]
gi|405752491|ref|YP_006675956.1| GTPase family protein [Listeria monocytogenes SLCC2378]
gi|405755402|ref|YP_006678866.1| GTPase family protein [Listeria monocytogenes SLCC2540]
gi|406704045|ref|YP_006754399.1| GTPase family protein [Listeria monocytogenes L312]
gi|417313732|ref|ZP_12100439.1| GTPase YlqF [Listeria monocytogenes J1816]
gi|417317426|ref|ZP_12104044.1| GTPase YlqF [Listeria monocytogenes J1-220]
gi|424714147|ref|YP_007014862.1| Ribosome biogenesis GTPase A [Listeria monocytogenes serotype 4b
str. LL195]
gi|424823037|ref|ZP_18248050.1| Ribosome biogenesis GTPase A [Listeria monocytogenes str. Scott A]
gi|46880767|gb|AAT04065.1| GTPase family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017706|gb|EAL08500.1| GTPase family protein [Listeria monocytogenes str. 4b H7858]
gi|225876337|emb|CAS05046.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258605992|gb|EEW18600.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-503]
gi|293583968|gb|EFF96000.1| ribosomal biogenesis GTPase [Listeria monocytogenes HPB2262]
gi|293593906|gb|EFG01667.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-194]
gi|300513991|gb|EFK41054.1| GTPase family protein [Listeria monocytogenes FSL N1-017]
gi|328468562|gb|EGF39562.1| GTPase YlqF [Listeria monocytogenes J1816]
gi|328475116|gb|EGF45900.1| GTPase YlqF [Listeria monocytogenes J1-220]
gi|332311717|gb|EGJ24812.1| Ribosome biogenesis GTPase A [Listeria monocytogenes str. Scott A]
gi|384390770|gb|AFH79840.1| GTPase YlqF [Listeria monocytogenes 07PF0776]
gi|404218816|emb|CBY70180.1| GTPase family protein [Listeria monocytogenes ATCC 19117]
gi|404221691|emb|CBY73054.1| GTPase family protein [Listeria monocytogenes SLCC2378]
gi|404224602|emb|CBY75964.1| GTPase family protein [Listeria monocytogenes SLCC2540]
gi|404227462|emb|CBY48867.1| GTPase family protein [Listeria monocytogenes SLCC2755]
gi|404245617|emb|CBY03842.1| GTPase family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361075|emb|CBY67348.1| GTPase family protein [Listeria monocytogenes L312]
gi|424013331|emb|CCO63871.1| Ribosome biogenesis GTPase A [Listeria monocytogenes serotype 4b
str. LL195]
Length = 287
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEK 215
>gi|255022620|ref|ZP_05294606.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J1-208]
Length = 287
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + ++A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFL 213
>gi|299536767|ref|ZP_07050075.1| hypothetical protein BFZC1_12128 [Lysinibacillus fusiformis ZC1]
gi|424737025|ref|ZP_18165481.1| hypothetical protein C518_1636 [Lysinibacillus fusiformis ZB2]
gi|298727779|gb|EFI68346.1| hypothetical protein BFZC1_12128 [Lysinibacillus fusiformis ZC1]
gi|422948857|gb|EKU43233.1| hypothetical protein C518_1636 [Lysinibacillus fusiformis ZB2]
Length = 291
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 139/212 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DAR+PLS+ +P++D+ + + R+L+LN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDIIFELIDARLPLSSRNPMIDEVINQKPRLLILNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YFAK+G K + N G G ++++ A+ + + + +++G+ PRA+R
Sbjct: 63 ADEQETRKWVEYFAKRGHKAVAINSLEGKGLQQVTKAAQEILKEKFDRMKARGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q KLA+ I + ++ D+A ++ L+
Sbjct: 183 QEVGFKLALTGAIKDTITNMEDLAVYGLRFLS 214
>gi|16803312|ref|NP_464797.1| ribosomal biogenesis GTPase [Listeria monocytogenes EGD-e]
gi|47097415|ref|ZP_00234964.1| GTPase family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254828635|ref|ZP_05233322.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL N3-165]
gi|254911947|ref|ZP_05261959.1| ribosomal biogenesis GTPase [Listeria monocytogenes J2818]
gi|254936273|ref|ZP_05267970.1| ribosomal biogenesis GTPase [Listeria monocytogenes F6900]
gi|255025708|ref|ZP_05297694.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL J2-003]
gi|284801657|ref|YP_003413522.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5578]
gi|284994799|ref|YP_003416567.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5923]
gi|386043583|ref|YP_005962388.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes 10403S]
gi|386046923|ref|YP_005965255.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes J0161]
gi|386050248|ref|YP_005968239.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-561]
gi|404283763|ref|YP_006684660.1| GTPase family protein [Listeria monocytogenes SLCC2372]
gi|404410569|ref|YP_006696157.1| GTPase family protein [Listeria monocytogenes SLCC5850]
gi|404413348|ref|YP_006698935.1| GTPase family protein [Listeria monocytogenes SLCC7179]
gi|405758319|ref|YP_006687595.1| GTPase family protein [Listeria monocytogenes SLCC2479]
gi|16410688|emb|CAC99350.1| lmo1272 [Listeria monocytogenes EGD-e]
gi|47014214|gb|EAL05198.1| GTPase family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258601034|gb|EEW14359.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL N3-165]
gi|258608862|gb|EEW21470.1| ribosomal biogenesis GTPase [Listeria monocytogenes F6900]
gi|284057219|gb|ADB68160.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5578]
gi|284060266|gb|ADB71205.1| ribosomal biogenesis GTPase [Listeria monocytogenes 08-5923]
gi|293589908|gb|EFF98242.1| ribosomal biogenesis GTPase [Listeria monocytogenes J2818]
gi|345533914|gb|AEO03355.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes J0161]
gi|345536817|gb|AEO06257.1| ribosome biogenesis GTP-binding protein YlqF [Listeria
monocytogenes 10403S]
gi|346424094|gb|AEO25619.1| ribosomal biogenesis GTPase [Listeria monocytogenes FSL R2-561]
gi|404230395|emb|CBY51799.1| GTPase family protein [Listeria monocytogenes SLCC5850]
gi|404233265|emb|CBY54668.1| GTPase family protein [Listeria monocytogenes SLCC2372]
gi|404236201|emb|CBY57603.1| GTPase family protein [Listeria monocytogenes SLCC2479]
gi|404239047|emb|CBY60448.1| GTPase family protein [Listeria monocytogenes SLCC7179]
gi|441470942|emb|CCQ20697.1| Ribosome biogenesis GTPase A [Listeria monocytogenes]
gi|441474069|emb|CCQ23823.1| Ribosome biogenesis GTPase A [Listeria monocytogenes N53-1]
Length = 287
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + ++A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFL 213
>gi|253573502|ref|ZP_04850845.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251847030|gb|EES75035.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 287
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++++++LKL+DVVIE+ DAR+PLS+ +P++D+ L + R++VLN+ D+
Sbjct: 3 IQWFPGHMTKARRQIQEKLKLIDVVIELLDARLPLSSRNPMIDEILQGKPRLIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF ++G + ++ G G ++ RLAK L + K+ +KG+ PRAVR
Sbjct: 63 ADPAVTRQWIAYFKEEGHLAVEADAASGQGLKEIPRLAKELLKERIEKQIAKGIKPRAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN L R++ RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINGLAGRKIAATGDRPGVTKGQQWIKVGTEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA+ I E +V D+A V+ L R
Sbjct: 183 QNVGYRLAVTGAIREEILNVEDIAFFAVKYLVR 215
>gi|422809350|ref|ZP_16857761.1| 50S ribosomal subunit maturation GTPase RbgA [Listeria
monocytogenes FSL J1-208]
gi|378752964|gb|EHY63549.1| 50S ribosomal subunit maturation GTPase RbgA [Listeria
monocytogenes FSL J1-208]
Length = 287
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + ++A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFL 213
>gi|315302907|ref|ZP_07873643.1| ribosome biogenesis GTP-binding protein YlqF [Listeria ivanovii FSL
F6-596]
gi|313628721|gb|EFR97118.1| ribosome biogenesis GTP-binding protein YlqF [Listeria ivanovii FSL
F6-596]
Length = 287
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + + ++A ++ L +
Sbjct: 183 QEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEQ 215
>gi|315282092|ref|ZP_07870580.1| ribosome biogenesis GTP-binding protein YlqF [Listeria marthii FSL
S4-120]
gi|313614262|gb|EFR87918.1| ribosome biogenesis GTP-binding protein YlqF [Listeria marthii FSL
S4-120]
Length = 288
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + ++R+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADT 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA++G + N Q G G K+ + A+ L ++ + RSKG+ PRA+R
Sbjct: 63 ADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + ++A ++ L
Sbjct: 183 QEIGYKLALTGAIKDDILQMEEIAGYGLRFL 213
>gi|205373354|ref|ZP_03226158.1| hypothetical protein Bcoam_08560 [Bacillus coahuilensis m4-4]
Length = 285
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DARIP+S+ +P+MDQ + + R+++LN+EDM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDIIFELVDARIPISSRNPMMDQIVQQKPRLVLLNKEDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YF ++G K I N Q G G + + AK + + ++KG+ PRA+R
Sbjct: 63 ADPELTKAWIAYFQERGIKAISLNAQEGNGLHAIVKAAKEILKPKWDRMKAKGMNPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIIGIPNVGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + ++ D++ ++ L +
Sbjct: 183 QEVGYKLAVTGAIKDTIINLQDISVYALRYLEK 215
>gi|393201741|ref|YP_006463583.1| GTPase [Solibacillus silvestris StLB046]
gi|406664618|ref|ZP_11072393.1| Ribosome biogenesis GTPase A [Bacillus isronensis B3W22]
gi|327441072|dbj|BAK17437.1| predicted GTPase [Solibacillus silvestris StLB046]
gi|405387466|gb|EKB46890.1| Ribosome biogenesis GTPase A [Bacillus isronensis B3W22]
Length = 317
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ + LKL+D+V E+ DAR+PLS+ +P++D+ + + R+L+LN++DM
Sbjct: 3 IQWFPGHMAKARRQVSESLKLVDIVFELVDARLPLSSRNPMIDEVIHQKPRLLILNKQDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YFA +G K + N G G +++ A+ + +D + +SKG+ PRA+R
Sbjct: 63 ADEQETRRWIQYFADRGFKAVAINSLEGKGLQAVTKAAQEILADKWERMKSKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKKNLAKTGNMPGVTKAQQWIKVGKEIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + ++ D+A ++ L
Sbjct: 183 QEVGYKLALTGAIKDTIMNMEDLAVYGLRFL 213
>gi|373857305|ref|ZP_09600047.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus sp. 1NLA3E]
gi|372452955|gb|EHP26424.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus sp. 1NLA3E]
Length = 297
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 137/214 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DAR+P S+ +P++D+ + ++ R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDIIFELVDARVPFSSRNPMIDEIIQHKPRLVLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF G + N Q G+G ++ AK L S+ K +S+G+ PRA+R
Sbjct: 63 ADREVTKQWIRYFQDNGVAALAINSQEGIGMKEIVIEAKKLLSEKFDKMKSRGINPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN GKS+LINRL K+ + PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNAGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +KLA+ I + ++ ++AA +Q L R+
Sbjct: 183 QEVGLKLAVTGAIKDTLLNMYEIAAYALQYLERV 216
>gi|311030148|ref|ZP_07708238.1| ribosomal biogenesis GTPase [Bacillus sp. m3-13]
Length = 285
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D+V E+ DARIP+S+ +P++D+ + N+ RI++LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPVSSRNPMIDEIISNKPRIILLNKADM 62
Query: 160 ISMADRNAWATYFAKQG--TKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
W YF G TK I + Q G G +++ L+K L + K +S+G+ PRA
Sbjct: 63 ADAKVTREWLDYFNLPGSSTKAIAIDSQTGKGIQQIATLSKELLKEKFDKMQSRGIRPRA 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
+RA IVG PNVGKS+LINRL K+ + RPGVT+ +WV+ GK+LE LD+PGI+ +
Sbjct: 123 IRALIVGIPNVGKSTLINRLAKKNIAQTGDRPGVTKAQQWVKVGKELELLDTPGILWPKF 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ +LA I + ++ D+A ++ L
Sbjct: 183 EDQEVGYRLATTGAIKDTIINLQDIAVFALRFL 215
>gi|387927054|ref|ZP_10129733.1| GTPase YlqF [Bacillus methanolicus PB1]
gi|387589198|gb|EIJ81518.1| GTPase YlqF [Bacillus methanolicus PB1]
Length = 289
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DARIP S+ +P++D+ + ++ R+L+LN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDIIFELVDARIPYSSRNPMIDEVIQHKPRLLLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF + + + N Q G G ++ L+K + + + ++KGL PRA+R
Sbjct: 63 ADQSKTKEWIEYFQENDIRALAINSQAGTGMKEIVALSKEILKEKFDRMKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN GKS+LINRL ++ + PGVTR +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNAGKSTLINRLARKNIAKTGNTPGVTRAQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLA+ I + ++ DVA ++ L R
Sbjct: 183 QEVGLKLALTGAIKDTILNLQDVAVYALRFLER 215
>gi|152976204|ref|YP_001375721.1| ribosomal biogenesis GTPase [Bacillus cytotoxicus NVH 391-98]
gi|152024956|gb|ABS22726.1| GTP-binding protein HSR1-related [Bacillus cytotoxicus NVH 391-98]
Length = 287
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWITYFEEKGHKAISINAQAGQGMKEITAACKELVKEKFDKMIAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|56964050|ref|YP_175781.1| GTPase [Bacillus clausii KSM-K16]
gi|56910293|dbj|BAD64820.1| GTPase [Bacillus clausii KSM-K16]
Length = 288
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 132/206 (64%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
++ +QWYPGH+AK +E+K++LKL+DVVIE+ DAR+P S+ +PL+D+ + R+++LN+
Sbjct: 1 MKTIQWYPGHMAKARREIKEKLKLIDVVIELVDARLPQSSRNPLIDELAQQKPRLMLLNK 60
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
D+ A+ W +F + G +V+ N Q G G ++ K LAS + K KG+ PR
Sbjct: 61 ADLADPAETERWRAFFKRTGAEVLAINAQTGAGVKNIAPACKTLASALYQKWEQKGMKPR 120
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+RA I+G PNVGKS+LINRL+ +R RPGVT+ +W++ ++LE LD+PGI+ +
Sbjct: 121 PLRAIILGIPNVGKSTLINRLVNKRQAKVGDRPGVTKQQQWIKVKQELELLDTPGILWPK 180
Query: 277 ISDQAAAIKLAICDDIGERSYDVADV 302
DQ ++LA I + D DV
Sbjct: 181 FDDQEVGLRLAATGAIKDELLDYGDV 206
>gi|226313197|ref|YP_002773091.1| ribosome biogenesis GTPase [Brevibacillus brevis NBRC 100599]
gi|226096145|dbj|BAH44587.1| ribosome biogenesis GTPase [Brevibacillus brevis NBRC 100599]
Length = 297
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELLDARLPLSSRNPMIDEIVSDKPRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF KQG + + + G G KL + K LA+D+ KR +G+ RA+R
Sbjct: 63 ADERATDEWIAYFRKQGIRTLPIDALSGKGVSKLPEMCKELAADMLAKRSERGMQGRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL KR + RP VT+ +WV+ G LE LD+PGI+ + D
Sbjct: 123 IMILGIPNVGKSSLINRLSKRSVAATGDRPAVTKAQQWVKMGDTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q ++LA I + D +VA ++ +
Sbjct: 183 QMVGLRLAASGAIKDELIDFTEVALFVISYM 213
>gi|56419739|ref|YP_147057.1| ribosomal biogenesis GTPase [Geobacillus kaustophilus HTA426]
gi|56379581|dbj|BAD75489.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 286
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+DV E+ DAR+P+S+ +P++D+ LG + R+++LN+ DM
Sbjct: 4 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARVPMSSRNPMIDEILGQKPRLILLNKADM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
A W YF QG + + Q G G +++ AK + D K R+KG+ PR V
Sbjct: 64 ADEAVTEQWIRYFHDQGRLALPIDAQSGTGVRQIAAAAKEMVKDKFEKMRAKGIKNPRPV 123
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 124 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 183
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA+ I + ++ DVA ++ L+
Sbjct: 184 DEDVGYKLAVTGAIKDEILNLQDVAVYALRFLS 216
>gi|398814561|ref|ZP_10573242.1| ribosome biogenesis GTP-binding protein YlqF [Brevibacillus sp.
BC25]
gi|398036830|gb|EJL30039.1| ribosome biogenesis GTP-binding protein YlqF [Brevibacillus sp.
BC25]
Length = 297
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELLDARLPLSSRNPMIDEIVSDKPRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF KQG + + + G G KL + K LA+D+ KR +G+ RA+R
Sbjct: 63 ADERATDEWIAYFRKQGIRTLPIDALSGKGVSKLPEMCKELAADMLAKRSERGMQGRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL KR + RP VT+ +WV+ G LE LD+PGI+ + D
Sbjct: 123 IMILGIPNVGKSSLINRLSKRSVAATGDRPAVTKAQQWVKMGDTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q ++LA I + D +VA ++ +
Sbjct: 183 QMVGLRLAASGAIKDELIDFTEVALFVISYM 213
>gi|261419404|ref|YP_003253086.1| ribosomal biogenesis GTPase [Geobacillus sp. Y412MC61]
gi|297530621|ref|YP_003671896.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
C56-T3]
gi|319766219|ref|YP_004131720.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
Y412MC52]
gi|448237360|ref|YP_007401418.1| ribosomal biogenesis GTPase A [Geobacillus sp. GHH01]
gi|261375861|gb|ACX78604.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
Y412MC61]
gi|297253873|gb|ADI27319.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
C56-T3]
gi|317111085|gb|ADU93577.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
Y412MC52]
gi|445206202|gb|AGE21667.1| ribosomal biogenesis GTPase A [Geobacillus sp. GHH01]
Length = 288
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+DV E+ DAR+P+S+ +P++D+ LG + R+++LN+ DM
Sbjct: 6 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARVPMSSRNPMIDEILGQKPRLILLNKADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
A W YF QG + + Q G G +++ AK + D K R+KG+ PR V
Sbjct: 66 ADEAVTEQWIRYFHDQGRLALPIDAQSGTGVRQIAAAAKEMVKDKFEKMRAKGIKNPRPV 125
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 126 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 185
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA+ I + ++ DVA ++ L+
Sbjct: 186 DEDVGYKLAVTGAIKDEILNLQDVAVYALRFLS 218
>gi|229019033|ref|ZP_04175874.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH1273]
gi|229025279|ref|ZP_04181699.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH1272]
gi|423389855|ref|ZP_17367081.1| ribosome biogenesis GTPase A [Bacillus cereus BAG1X1-3]
gi|423418255|ref|ZP_17395344.1| ribosome biogenesis GTPase A [Bacillus cereus BAG3X2-1]
gi|228736032|gb|EEL86607.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH1272]
gi|228742273|gb|EEL92432.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH1273]
gi|401106528|gb|EJQ14489.1| ribosome biogenesis GTPase A [Bacillus cereus BAG3X2-1]
gi|401641946|gb|EJS59663.1| ribosome biogenesis GTPase A [Bacillus cereus BAG1X1-3]
Length = 296
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHKAISINAQAGQGMKEIAAACKILVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|149183640|ref|ZP_01862057.1| ribosomal biogenesis GTPase [Bacillus sp. SG-1]
gi|148848657|gb|EDL62890.1| ribosomal biogenesis GTPase [Bacillus sp. SG-1]
Length = 287
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 140/213 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D++IE+ DARIP+S+ +P++D+ + + R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLVDIIIELVDARIPISSRNPMIDEVVQQKPRLVLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF+++G K + N Q G G + + +K + S+ + RS+G+ PRA+R
Sbjct: 63 ADKVLTDQWINYFSERGIKALAVNAQGGTGLGDIVKASKEILSEKFDRMRSRGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I + ++ D+A ++ L +
Sbjct: 183 EEVGYKLALTGAIKDTILNLQDIAVYGLRFLEK 215
>gi|399047108|ref|ZP_10739240.1| ribosome biogenesis GTP-binding protein YlqF [Brevibacillus sp.
CF112]
gi|433546085|ref|ZP_20502423.1| ribosome biogenesis GTPase [Brevibacillus agri BAB-2500]
gi|398054941|gb|EJL47039.1| ribosome biogenesis GTP-binding protein YlqF [Brevibacillus sp.
CF112]
gi|432182701|gb|ELK40264.1| ribosome biogenesis GTPase [Brevibacillus agri BAB-2500]
Length = 297
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 133/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELLDARLPLSSRNPMIDEIVSDKPRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + + G G KL L K LA+D+ KR +G+ RA+R
Sbjct: 63 ADEKATEEWIAYFRKEGIRTLPIDALSGKGVNKLPELCKELAADMLAKRSERGMQGRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL KR + RP VT+ +WV+ G LE LD+PGI+ + D
Sbjct: 123 IMILGIPNVGKSSLINRLSKRSVAATGDRPAVTKAQQWVKMGDTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q ++LA I + D +VA ++ +
Sbjct: 183 QMVGLRLAASGAIKDELIDFTEVALFVISYM 213
>gi|138894725|ref|YP_001125178.1| ribosomal biogenesis GTPase [Geobacillus thermodenitrificans
NG80-2]
gi|134266238|gb|ABO66433.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
Length = 286
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 135/213 (63%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+DV E+ DAR+P+S+ +P++D LG + R+++LN+ DM
Sbjct: 4 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARVPMSSRNPMIDDILGQKTRLILLNKADM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
A W YF QG I + Q G G ++ AK + D K R+KG+ PR V
Sbjct: 64 ADEAVTEQWIRYFRDQGRTAIAIDAQSGTGVKQIVAAAKEMVKDKFEKMRAKGIKNPRPV 123
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 124 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 183
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ +LA+ I + ++ DVA ++ L+
Sbjct: 184 DEDVGYRLAVTGAIKDEILNLQDVAVYALRFLS 216
>gi|196247656|ref|ZP_03146358.1| GTP-binding protein HSR1-related [Geobacillus sp. G11MC16]
gi|196212440|gb|EDY07197.1| GTP-binding protein HSR1-related [Geobacillus sp. G11MC16]
Length = 288
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 135/213 (63%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+DV E+ DAR+P+S+ +P++D LG + R+++LN+ DM
Sbjct: 6 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARVPMSSRNPMIDDILGQKTRLILLNKADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
A W YF QG I + Q G G ++ AK + D K R+KG+ PR V
Sbjct: 66 ADEAVTEQWIRYFRDQGRTAIAIDAQSGTGVKQIVAAAKEMVKDKFEKMRAKGIKNPRPV 125
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 126 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 185
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ +LA+ I + ++ DVA ++ L+
Sbjct: 186 DEDVGYRLAVTGAIKDEILNLQDVAVYALRFLS 218
>gi|299822634|ref|ZP_07054520.1| ribosome biogenesis GTP-binding protein YlqF [Listeria grayi DSM
20601]
gi|299816163|gb|EFI83401.1| ribosome biogenesis GTP-binding protein YlqF [Listeria grayi DSM
20601]
Length = 289
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 135/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DV+ E+ DAR+PLS+ +P++ + + +KR+++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLVDVIFELVDARLPLSSANPMLAEIIHQKKRVIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA+QG + + Q G G K+SR A+ L + ++KG+ PRA+R
Sbjct: 63 ADEVRTAEWIDYFAEQGLLAVAVDAQAGKGMHKISRAAELLMKEKFDNWKTKGMKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + +PGVT+ +W++ K LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVEKSLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q+ KLA+ I + + D+A+ + +
Sbjct: 183 QSVGFKLALTGAIKDDLLQMEDIASFAAEFFRK 215
>gi|229086391|ref|ZP_04218567.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-44]
gi|228696907|gb|EEL49716.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-44]
Length = 287
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFEEKGHKAISINAQAGQGMKEITAACKVLVKEKFDKMIAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|423522332|ref|ZP_17498805.1| ribosome biogenesis GTPase A [Bacillus cereus HuA4-10]
gi|401175026|gb|EJQ82229.1| ribosome biogenesis GTPase A [Bacillus cereus HuA4-10]
Length = 296
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAIYALRFMEK 215
>gi|423483428|ref|ZP_17460118.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6X1-2]
gi|401140979|gb|EJQ48534.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6X1-2]
Length = 296
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 133/204 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q ++LA I + ++ DVA
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVA 206
>gi|228992566|ref|ZP_04152493.1| Ras superfamily GTP-binding protein YlqF [Bacillus pseudomycoides
DSM 12442]
gi|228998614|ref|ZP_04158201.1| Ras superfamily GTP-binding protein YlqF [Bacillus mycoides
Rock3-17]
gi|229006114|ref|ZP_04163802.1| Ras superfamily GTP-binding protein YlqF [Bacillus mycoides
Rock1-4]
gi|228755190|gb|EEM04547.1| Ras superfamily GTP-binding protein YlqF [Bacillus mycoides
Rock1-4]
gi|228761082|gb|EEM10041.1| Ras superfamily GTP-binding protein YlqF [Bacillus mycoides
Rock3-17]
gi|228767200|gb|EEM15836.1| Ras superfamily GTP-binding protein YlqF [Bacillus pseudomycoides
DSM 12442]
Length = 290
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFEEKGHKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|375008175|ref|YP_004981808.1| ribosome biogenesis GTPase A [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287024|gb|AEV18708.1| Ribosome biogenesis GTPase A [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 288
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 136/213 (63%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+DV E+ DAR+P+S+ +P++D LG + R+++LN+ DM
Sbjct: 6 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARLPMSSRNPMIDDILGQKPRLILLNKADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
A W YF QG + + Q G G +++ AK + D K R+KG+ PR V
Sbjct: 66 ADEAVTEQWIRYFHDQGRLALPIDAQSGTGVRQIAAAAKEMVKDKFEKMRAKGIKNPRPV 125
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 126 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 185
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA+ I + ++ DVA ++ L+
Sbjct: 186 DEDVGYKLAVTGAIKDEILNLQDVAVYALRFLS 218
>gi|423401320|ref|ZP_17378493.1| ribosome biogenesis GTPase A [Bacillus cereus BAG2X1-2]
gi|423457979|ref|ZP_17434776.1| ribosome biogenesis GTPase A [Bacillus cereus BAG5X2-1]
gi|423477976|ref|ZP_17454691.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6X1-1]
gi|401148363|gb|EJQ55856.1| ribosome biogenesis GTPase A [Bacillus cereus BAG5X2-1]
gi|401654310|gb|EJS71853.1| ribosome biogenesis GTPase A [Bacillus cereus BAG2X1-2]
gi|402428138|gb|EJV60235.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6X1-1]
Length = 296
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGQMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|415886553|ref|ZP_11548333.1| ribosomal biogenesis GTPase [Bacillus methanolicus MGA3]
gi|387587240|gb|EIJ79563.1| ribosomal biogenesis GTPase [Bacillus methanolicus MGA3]
Length = 290
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DARIP S+ +P++D+ + ++ R+L+LN+ DM
Sbjct: 3 IQWFPGHMAKARREVSEKLKLVDIIFELVDARIPYSSRNPMIDEIIQHKPRLLLLNKSDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF G + + N Q G G ++ L++ + + + ++KG+ PRA+R
Sbjct: 63 ADQSKTKEWIQYFNMNGIRALAINSQAGTGMKEIVALSREILKEKFDRMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN GKS+LINRL ++ + PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNSGKSTLINRLARKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ +KLA+ I + ++ DVA ++ L R
Sbjct: 183 EEVGLKLALTGAIKDTILNLQDVAVYALRFLER 215
>gi|229174504|ref|ZP_04302036.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus MM3]
gi|228609064|gb|EEK66354.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus MM3]
Length = 296
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGQMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|423395861|ref|ZP_17373062.1| ribosome biogenesis GTPase A [Bacillus cereus BAG2X1-1]
gi|423406737|ref|ZP_17383886.1| ribosome biogenesis GTPase A [Bacillus cereus BAG2X1-3]
gi|401653603|gb|EJS71147.1| ribosome biogenesis GTPase A [Bacillus cereus BAG2X1-1]
gi|401660027|gb|EJS77510.1| ribosome biogenesis GTPase A [Bacillus cereus BAG2X1-3]
Length = 296
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKEWIAYFKEKGHMAISINAQAGQGMKEITAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|163941576|ref|YP_001646460.1| ribosomal biogenesis GTPase [Bacillus weihenstephanensis KBAB4]
gi|229168577|ref|ZP_04296300.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH621]
gi|423518528|ref|ZP_17495009.1| ribosome biogenesis GTPase A [Bacillus cereus HuA2-4]
gi|423592166|ref|ZP_17568197.1| ribosome biogenesis GTPase A [Bacillus cereus VD048]
gi|423669412|ref|ZP_17644441.1| ribosome biogenesis GTPase A [Bacillus cereus VDM034]
gi|423674409|ref|ZP_17649348.1| ribosome biogenesis GTPase A [Bacillus cereus VDM062]
gi|163863773|gb|ABY44832.1| GTP-binding protein HSR1-related [Bacillus weihenstephanensis
KBAB4]
gi|228614983|gb|EEK72085.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH621]
gi|401160736|gb|EJQ68111.1| ribosome biogenesis GTPase A [Bacillus cereus HuA2-4]
gi|401232299|gb|EJR38801.1| ribosome biogenesis GTPase A [Bacillus cereus VD048]
gi|401298539|gb|EJS04139.1| ribosome biogenesis GTPase A [Bacillus cereus VDM034]
gi|401309960|gb|EJS15293.1| ribosome biogenesis GTPase A [Bacillus cereus VDM062]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAIYALRFMEK 215
>gi|229134646|ref|ZP_04263455.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-ST196]
gi|228648692|gb|EEL04718.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-ST196]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAIYALRFMEK 215
>gi|229013021|ref|ZP_04170186.1| Ras superfamily GTP-binding protein YlqF [Bacillus mycoides DSM
2048]
gi|423489014|ref|ZP_17465696.1| ribosome biogenesis GTPase A [Bacillus cereus BtB2-4]
gi|423494739|ref|ZP_17471383.1| ribosome biogenesis GTPase A [Bacillus cereus CER057]
gi|423498469|ref|ZP_17475086.1| ribosome biogenesis GTPase A [Bacillus cereus CER074]
gi|423511872|ref|ZP_17488403.1| ribosome biogenesis GTPase A [Bacillus cereus HuA2-1]
gi|423598851|ref|ZP_17574851.1| ribosome biogenesis GTPase A [Bacillus cereus VD078]
gi|423661322|ref|ZP_17636491.1| ribosome biogenesis GTPase A [Bacillus cereus VDM022]
gi|228748275|gb|EEL98135.1| Ras superfamily GTP-binding protein YlqF [Bacillus mycoides DSM
2048]
gi|401150832|gb|EJQ58284.1| ribosome biogenesis GTPase A [Bacillus cereus CER057]
gi|401160518|gb|EJQ67896.1| ribosome biogenesis GTPase A [Bacillus cereus CER074]
gi|401237121|gb|EJR43578.1| ribosome biogenesis GTPase A [Bacillus cereus VD078]
gi|401301363|gb|EJS06952.1| ribosome biogenesis GTPase A [Bacillus cereus VDM022]
gi|402432262|gb|EJV64321.1| ribosome biogenesis GTPase A [Bacillus cereus BtB2-4]
gi|402450133|gb|EJV81967.1| ribosome biogenesis GTPase A [Bacillus cereus HuA2-1]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAIYALRFMEK 215
>gi|217961258|ref|YP_002339826.1| ribosomal biogenesis GTPase [Bacillus cereus AH187]
gi|229140481|ref|ZP_04269036.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-ST26]
gi|229157414|ref|ZP_04285492.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus ATCC
4342]
gi|229197948|ref|ZP_04324663.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus m1293]
gi|375285761|ref|YP_005106200.1| GTPase family protein [Bacillus cereus NC7401]
gi|384181651|ref|YP_005567413.1| GTPase YlqF [Bacillus thuringiensis serovar finitimus YBT-020]
gi|423353540|ref|ZP_17331167.1| ribosome biogenesis GTPase A [Bacillus cereus IS075]
gi|423374365|ref|ZP_17351703.1| ribosome biogenesis GTPase A [Bacillus cereus AND1407]
gi|423567267|ref|ZP_17543514.1| ribosome biogenesis GTPase A [Bacillus cereus MSX-A12]
gi|423574556|ref|ZP_17550675.1| ribosome biogenesis GTPase A [Bacillus cereus MSX-D12]
gi|423604535|ref|ZP_17580428.1| ribosome biogenesis GTPase A [Bacillus cereus VD102]
gi|217065992|gb|ACJ80242.1| GTPase family protein [Bacillus cereus AH187]
gi|228585527|gb|EEK43630.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus m1293]
gi|228626141|gb|EEK82890.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus ATCC
4342]
gi|228643042|gb|EEK99318.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-ST26]
gi|324327735|gb|ADY22995.1| GTPase YlqF [Bacillus thuringiensis serovar finitimus YBT-020]
gi|358354288|dbj|BAL19460.1| GTPase family protein [Bacillus cereus NC7401]
gi|401089353|gb|EJP97524.1| ribosome biogenesis GTPase A [Bacillus cereus IS075]
gi|401094277|gb|EJQ02359.1| ribosome biogenesis GTPase A [Bacillus cereus AND1407]
gi|401212081|gb|EJR18827.1| ribosome biogenesis GTPase A [Bacillus cereus MSX-D12]
gi|401214355|gb|EJR21085.1| ribosome biogenesis GTPase A [Bacillus cereus MSX-A12]
gi|401245155|gb|EJR51513.1| ribosome biogenesis GTPase A [Bacillus cereus VD102]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|228986981|ref|ZP_04147107.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228772759|gb|EEM21199.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|222097283|ref|YP_002531340.1| ribosomal biogenesis gtpase [Bacillus cereus Q1]
gi|221241341|gb|ACM14051.1| GTPase family protein [Bacillus cereus Q1]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|423367882|ref|ZP_17345314.1| ribosome biogenesis GTPase A [Bacillus cereus VD142]
gi|423452861|ref|ZP_17429714.1| ribosome biogenesis GTPase A [Bacillus cereus BAG5X1-1]
gi|423470052|ref|ZP_17446796.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6O-2]
gi|401082743|gb|EJP91008.1| ribosome biogenesis GTPase A [Bacillus cereus VD142]
gi|401139420|gb|EJQ46982.1| ribosome biogenesis GTPase A [Bacillus cereus BAG5X1-1]
gi|402437304|gb|EJV69328.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6O-2]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAIYALRFMEK 215
>gi|229061441|ref|ZP_04198786.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH603]
gi|423558599|ref|ZP_17534901.1| ribosome biogenesis GTPase A [Bacillus cereus MC67]
gi|228717864|gb|EEL69512.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH603]
gi|401191867|gb|EJQ98889.1| ribosome biogenesis GTPase A [Bacillus cereus MC67]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 137/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G K I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFDERGQKAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAIYALRFMEK 215
>gi|423615901|ref|ZP_17591735.1| ribosome biogenesis GTPase A [Bacillus cereus VD115]
gi|401260438|gb|EJR66611.1| ribosome biogenesis GTPase A [Bacillus cereus VD115]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKEWIAYFKEKGHMAISINAQAGQGMKEITAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|423582048|ref|ZP_17558159.1| ribosome biogenesis GTPase A [Bacillus cereus VD014]
gi|401212927|gb|EJR19668.1| ribosome biogenesis GTPase A [Bacillus cereus VD014]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGIKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|228902341|ref|ZP_04066498.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
IBL 4222]
gi|423561756|ref|ZP_17538032.1| ribosome biogenesis GTPase A [Bacillus cereus MSX-A1]
gi|434376941|ref|YP_006611585.1| GTPase YlqF [Bacillus thuringiensis HD-789]
gi|228857310|gb|EEN01813.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
IBL 4222]
gi|401202013|gb|EJR08878.1| ribosome biogenesis GTPase A [Bacillus cereus MSX-A1]
gi|401875498|gb|AFQ27665.1| GTPase YlqF [Bacillus thuringiensis HD-789]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|206972755|ref|ZP_03233685.1| GTPase family protein [Bacillus cereus AH1134]
gi|218898991|ref|YP_002447402.1| ribosomal biogenesis GTPase [Bacillus cereus G9842]
gi|228909663|ref|ZP_04073486.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
IBL 200]
gi|228940926|ref|ZP_04103485.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228954114|ref|ZP_04116143.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228966783|ref|ZP_04127827.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228973855|ref|ZP_04134431.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980445|ref|ZP_04140755.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
Bt407]
gi|229071336|ref|ZP_04204559.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus F65185]
gi|229081093|ref|ZP_04213603.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock4-2]
gi|229180114|ref|ZP_04307458.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus 172560W]
gi|384187898|ref|YP_005573794.1| ribosomal biogenesis GTPase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402558836|ref|YP_006601560.1| GTPase YlqF [Bacillus thuringiensis HD-771]
gi|410676212|ref|YP_006928583.1| ribosome biogenesis GTPase A [Bacillus thuringiensis Bt407]
gi|423359126|ref|ZP_17336629.1| ribosome biogenesis GTPase A [Bacillus cereus VD022]
gi|423385341|ref|ZP_17362597.1| ribosome biogenesis GTPase A [Bacillus cereus BAG1X1-2]
gi|423412357|ref|ZP_17389477.1| ribosome biogenesis GTPase A [Bacillus cereus BAG3O-2]
gi|423425974|ref|ZP_17403005.1| ribosome biogenesis GTPase A [Bacillus cereus BAG3X2-2]
gi|423431858|ref|ZP_17408862.1| ribosome biogenesis GTPase A [Bacillus cereus BAG4O-1]
gi|423437293|ref|ZP_17414274.1| ribosome biogenesis GTPase A [Bacillus cereus BAG4X12-1]
gi|423503485|ref|ZP_17480077.1| ribosome biogenesis GTPase A [Bacillus cereus HD73]
gi|423528301|ref|ZP_17504746.1| ribosome biogenesis GTPase A [Bacillus cereus HuB1-1]
gi|423635391|ref|ZP_17611044.1| ribosome biogenesis GTPase A [Bacillus cereus VD156]
gi|449090779|ref|YP_007423220.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452200277|ref|YP_007480358.1| 50S ribosomal subunit maturation GTPase RbgA [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|206732320|gb|EDZ49512.1| GTPase family protein [Bacillus cereus AH1134]
gi|218544561|gb|ACK96955.1| GTPase family protein [Bacillus cereus G9842]
gi|228603323|gb|EEK60800.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus 172560W]
gi|228702137|gb|EEL54613.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock4-2]
gi|228711790|gb|EEL63742.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus F65185]
gi|228779265|gb|EEM27522.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
Bt407]
gi|228785880|gb|EEM33883.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228792882|gb|EEM40440.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228805680|gb|EEM52270.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228818762|gb|EEM64828.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228849952|gb|EEM94783.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
IBL 200]
gi|326941607|gb|AEA17503.1| ribosomal biogenesis GTPase [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401084998|gb|EJP93244.1| ribosome biogenesis GTPase A [Bacillus cereus VD022]
gi|401104425|gb|EJQ12402.1| ribosome biogenesis GTPase A [Bacillus cereus BAG3O-2]
gi|401110721|gb|EJQ18620.1| ribosome biogenesis GTPase A [Bacillus cereus BAG3X2-2]
gi|401116614|gb|EJQ24452.1| ribosome biogenesis GTPase A [Bacillus cereus BAG4O-1]
gi|401120448|gb|EJQ28244.1| ribosome biogenesis GTPase A [Bacillus cereus BAG4X12-1]
gi|401278142|gb|EJR84078.1| ribosome biogenesis GTPase A [Bacillus cereus VD156]
gi|401635397|gb|EJS53152.1| ribosome biogenesis GTPase A [Bacillus cereus BAG1X1-2]
gi|401787488|gb|AFQ13527.1| GTPase YlqF [Bacillus thuringiensis HD-771]
gi|402451964|gb|EJV83783.1| ribosome biogenesis GTPase A [Bacillus cereus HuB1-1]
gi|402458839|gb|EJV90579.1| ribosome biogenesis GTPase A [Bacillus cereus HD73]
gi|409175341|gb|AFV19646.1| ribosome biogenesis GTPase A [Bacillus thuringiensis Bt407]
gi|449024536|gb|AGE79699.1| GTPase family protein [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|452105670|gb|AGG02610.1| 50S ribosomal subunit maturation GTPase RbgA [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|42782930|ref|NP_980177.1| ribosomal biogenesis GTPase [Bacillus cereus ATCC 10987]
gi|402556041|ref|YP_006597312.1| GTPase YlqF [Bacillus cereus FRI-35]
gi|42738857|gb|AAS42785.1| GTPase family protein [Bacillus cereus ATCC 10987]
gi|401797251|gb|AFQ11110.1| GTPase YlqF [Bacillus cereus FRI-35]
Length = 296
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|30021926|ref|NP_833557.1| ribosomal biogenesis GTPase [Bacillus cereus ATCC 14579]
gi|218236121|ref|YP_002368639.1| ribosomal biogenesis GTPase [Bacillus cereus B4264]
gi|228960054|ref|ZP_04121718.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229047525|ref|ZP_04193115.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH676]
gi|229111309|ref|ZP_04240862.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock1-15]
gi|229129114|ref|ZP_04258087.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-Cer4]
gi|229146409|ref|ZP_04274780.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-ST24]
gi|229152037|ref|ZP_04280232.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus m1550]
gi|296504333|ref|YP_003666033.1| ribosomal biogenesis GTPase [Bacillus thuringiensis BMB171]
gi|423585753|ref|ZP_17561840.1| ribosome biogenesis GTPase A [Bacillus cereus VD045]
gi|423628931|ref|ZP_17604680.1| ribosome biogenesis GTPase A [Bacillus cereus VD154]
gi|423641081|ref|ZP_17616699.1| ribosome biogenesis GTPase A [Bacillus cereus VD166]
gi|423649701|ref|ZP_17625271.1| ribosome biogenesis GTPase A [Bacillus cereus VD169]
gi|423656697|ref|ZP_17631996.1| ribosome biogenesis GTPase A [Bacillus cereus VD200]
gi|81580508|sp|Q819W8.1|RBGA_BACCR RecName: Full=Ribosome biogenesis GTPase A
gi|29897482|gb|AAP10758.1| GTP-binding protein [Bacillus cereus ATCC 14579]
gi|218164078|gb|ACK64070.1| GTPase family protein [Bacillus cereus B4264]
gi|228631386|gb|EEK88020.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus m1550]
gi|228637042|gb|EEK93501.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-ST24]
gi|228654351|gb|EEL10216.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus
BDRD-Cer4]
gi|228672085|gb|EEL27376.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock1-15]
gi|228723772|gb|EEL75127.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH676]
gi|228799570|gb|EEM46523.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296325385|gb|ADH08313.1| ribosomal biogenesis GTPase [Bacillus thuringiensis BMB171]
gi|401233099|gb|EJR39595.1| ribosome biogenesis GTPase A [Bacillus cereus VD045]
gi|401268476|gb|EJR74524.1| ribosome biogenesis GTPase A [Bacillus cereus VD154]
gi|401280142|gb|EJR86064.1| ribosome biogenesis GTPase A [Bacillus cereus VD166]
gi|401282981|gb|EJR88878.1| ribosome biogenesis GTPase A [Bacillus cereus VD169]
gi|401290438|gb|EJR96132.1| ribosome biogenesis GTPase A [Bacillus cereus VD200]
Length = 296
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|423612055|ref|ZP_17587916.1| ribosome biogenesis GTPase A [Bacillus cereus VD107]
gi|401247062|gb|EJR53406.1| ribosome biogenesis GTPase A [Bacillus cereus VD107]
Length = 296
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEITAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|229192007|ref|ZP_04318977.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus ATCC
10876]
gi|228591558|gb|EEK49407.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus ATCC
10876]
Length = 296
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|229104400|ref|ZP_04235069.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-28]
gi|228679098|gb|EEL33306.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-28]
Length = 296
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKEWIAYFKEKGHMAISINAQAGQGMKEITAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|47570717|ref|ZP_00241305.1| GTPase of unknown function [Bacillus cereus G9241]
gi|47552615|gb|EAL11078.1| GTPase of unknown function [Bacillus cereus G9241]
Length = 225
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 132/204 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDHLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q ++LA I + ++ DVA
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVA 206
>gi|312111696|ref|YP_003990012.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
Y4.1MC1]
gi|336236071|ref|YP_004588687.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus
thermoglucosidasius C56-YS93]
gi|423720614|ref|ZP_17694796.1| ribosome biogenesis GTP-binding protein ylqF [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216797|gb|ADP75401.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus sp.
Y4.1MC1]
gi|335362926|gb|AEH48606.1| ribosome biogenesis GTP-binding protein YlqF [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365967|gb|EID43258.1| ribosome biogenesis GTP-binding protein ylqF [Geobacillus
thermoglucosidans TNO-09.020]
Length = 281
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 137/212 (64%), Gaps = 1/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+D+V E+ DARIP+S+ +P++++ LGN+ RI++LN+ DM
Sbjct: 3 IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPMSSRNPMINEILGNKPRIVLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
A W YF +Q + + + Q G G ++ ++K + D K +KG+ PR +
Sbjct: 63 ADEAATQQWIAYFQQQQLRALAIDAQTGTGIKQIVAVSKEMLKDKFAKMAAKGIKNPRPM 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 123 RALIVGIPNVGKSTLINRLAGRNIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
++ +KLA I + ++ DVA + L
Sbjct: 183 EEEVGLKLATTGAIKDTILNLQDVAVYALNFL 214
>gi|228922592|ref|ZP_04085892.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|365159385|ref|ZP_09355566.1| ribosome biogenesis GTPase A [Bacillus sp. 7_6_55CFAA_CT2]
gi|228837021|gb|EEM82362.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|363625383|gb|EHL76424.1| ribosome biogenesis GTPase A [Bacillus sp. 7_6_55CFAA_CT2]
Length = 296
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|229098307|ref|ZP_04229254.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-29]
gi|229117324|ref|ZP_04246702.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock1-3]
gi|407706297|ref|YP_006829882.1| chitin-binding protein [Bacillus thuringiensis MC28]
gi|423378323|ref|ZP_17355607.1| ribosome biogenesis GTPase A [Bacillus cereus BAG1O-2]
gi|423441431|ref|ZP_17418337.1| ribosome biogenesis GTPase A [Bacillus cereus BAG4X2-1]
gi|423448343|ref|ZP_17425222.1| ribosome biogenesis GTPase A [Bacillus cereus BAG5O-1]
gi|423464505|ref|ZP_17441273.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6O-1]
gi|423533847|ref|ZP_17510265.1| ribosome biogenesis GTPase A [Bacillus cereus HuB2-9]
gi|423540884|ref|ZP_17517275.1| ribosome biogenesis GTPase A [Bacillus cereus HuB4-10]
gi|423547122|ref|ZP_17523480.1| ribosome biogenesis GTPase A [Bacillus cereus HuB5-5]
gi|423623086|ref|ZP_17598864.1| ribosome biogenesis GTPase A [Bacillus cereus VD148]
gi|228666224|gb|EEL21688.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock1-3]
gi|228685205|gb|EEL39136.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-29]
gi|401128937|gb|EJQ36620.1| ribosome biogenesis GTPase A [Bacillus cereus BAG5O-1]
gi|401172072|gb|EJQ79293.1| ribosome biogenesis GTPase A [Bacillus cereus HuB4-10]
gi|401178843|gb|EJQ86016.1| ribosome biogenesis GTPase A [Bacillus cereus HuB5-5]
gi|401259859|gb|EJR66033.1| ribosome biogenesis GTPase A [Bacillus cereus VD148]
gi|401636589|gb|EJS54343.1| ribosome biogenesis GTPase A [Bacillus cereus BAG1O-2]
gi|402418092|gb|EJV50392.1| ribosome biogenesis GTPase A [Bacillus cereus BAG4X2-1]
gi|402420772|gb|EJV53043.1| ribosome biogenesis GTPase A [Bacillus cereus BAG6O-1]
gi|402464066|gb|EJV95766.1| ribosome biogenesis GTPase A [Bacillus cereus HuB2-9]
gi|407383982|gb|AFU14483.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
MC28]
Length = 296
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKEWIAYFKEKGHMAISINAQAGQGMKEITAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|381182604|ref|ZP_09891401.1| GTPase YlqF [Listeriaceae bacterium TTU M1-001]
gi|380317493|gb|EIA20815.1| GTPase YlqF [Listeriaceae bacterium TTU M1-001]
Length = 287
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DV+ E+ DARIPLS+++P++++ + +KR+++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKKRVIILNKSDA 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F ++G + N Q G + R A+ L ++ +++ +G+ PRA+R
Sbjct: 63 ADEKITAEWVAHFKEKGLLAVPVNAQQGKNLHAIERAAQELMAEKFARQKERGMRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL+K+ + +PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINRLVKKNIAKTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA+ I + ++ ++A + L +
Sbjct: 183 QEVGFKLALTGAIKDDLLNMEEIALYGLHFLEK 215
>gi|339009353|ref|ZP_08641925.1| ribosome biogenesis GTPase A [Brevibacillus laterosporus LMG 15441]
gi|338773831|gb|EGP33362.1| ribosome biogenesis GTPase A [Brevibacillus laterosporus LMG 15441]
Length = 298
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LK +DVVIE+ DAR+PLS+ +P++D+ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKLKQVDVVIELLDARLPLSSRNPMIDEIVAEKPRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF +QG + + + G G KL L + LASD+ KR +G+L RAVR
Sbjct: 63 ADPSVTEMWIRYFKEQGLRTLPIDALSGRGVNKLPELCQELASDMLQKRADRGMLARAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL KR + RP VT+ +WV+ G LE LD+PGI+ + D
Sbjct: 123 IMILGIPNVGKSSLINRLAKRSVAQTGDRPAVTKSQQWVKMGDTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q ++LA I + D ++VA V+ +
Sbjct: 183 QMVGLRLAASGAIKDELIDFSEVALYAVRYM 213
>gi|239826597|ref|YP_002949221.1| ribosomal biogenesis GTPase [Geobacillus sp. WCH70]
gi|338819267|sp|C5D8U8.1|RBGA_GEOSW RecName: Full=Ribosome biogenesis GTPase A
gi|239806890|gb|ACS23955.1| GTP-binding protein HSR1-related [Geobacillus sp. WCH70]
Length = 283
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 134/214 (62%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+D+V E+ DARIPLS+ +P++ + LGN+ RI++LN+ DM
Sbjct: 5 IQWFPGHMAKAKREVQEKLKLIDIVFELLDARIPLSSRNPMIHEILGNKPRIVLLNKADM 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W YF +Q + + Q G G ++ AK + D K +KG+ PR +
Sbjct: 65 ADETVTEQWIAYFERQQLHALAIDAQTGTGIRQIVSAAKEMLKDKFAKMAAKGIKNPRPM 124
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL R + +PGVT+ +W++ GK++E LD+PGI+ +
Sbjct: 125 RALIVGIPNVGKSTLINRLAGRNIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 184
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
D+ +KLA I + ++ DVA + L +
Sbjct: 185 DEEVGLKLATTGAIKDTILNLQDVAVYALNFLKQ 218
>gi|118479060|ref|YP_896211.1| ribosomal biogenesis GTPase [Bacillus thuringiensis str. Al Hakam]
gi|118418285|gb|ABK86704.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
str. Al Hakam]
Length = 314
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 21 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 80
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 81 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 140
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 141 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 200
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 201 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 233
>gi|52141650|ref|YP_085179.1| ribosomal biogenesis GTPase [Bacillus cereus E33L]
gi|218904967|ref|YP_002452801.1| ribosomal biogenesis GTPase [Bacillus cereus AH820]
gi|225865819|ref|YP_002751197.1| GTPase family protein [Bacillus cereus 03BB102]
gi|228916475|ref|ZP_04080041.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928886|ref|ZP_04091918.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935152|ref|ZP_04097979.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228947557|ref|ZP_04109847.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229092880|ref|ZP_04224014.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-42]
gi|229123352|ref|ZP_04252556.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus 95/8201]
gi|229186078|ref|ZP_04313247.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus BGSC 6E1]
gi|254721976|ref|ZP_05183765.1| ribosomal biogenesis GTPase [Bacillus anthracis str. A1055]
gi|301055328|ref|YP_003793539.1| GTP-binding protein HSR1-like protein [Bacillus cereus biovar
anthracis str. CI]
gi|376267734|ref|YP_005120446.1| 50S ribosomal subunit maturation GTPase RbgA [Bacillus cereus
F837/76]
gi|423550413|ref|ZP_17526740.1| ribosome biogenesis GTPase A [Bacillus cereus ISP3191]
gi|51975119|gb|AAU16669.1| conserved hypothetical protein; GTPase family [Bacillus cereus
E33L]
gi|218539759|gb|ACK92157.1| GTPase family protein [Bacillus cereus AH820]
gi|225788163|gb|ACO28380.1| GTPase family protein [Bacillus cereus 03BB102]
gi|228597254|gb|EEK54905.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus BGSC 6E1]
gi|228660128|gb|EEL15764.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus 95/8201]
gi|228690502|gb|EEL44285.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus Rock3-42]
gi|228812077|gb|EEM58408.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824517|gb|EEM70322.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830693|gb|EEM76298.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843054|gb|EEM88136.1| Ras superfamily GTP-binding protein YlqF [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|300377497|gb|ADK06401.1| GTP-binding protein HSR1-related protein [Bacillus cereus biovar
anthracis str. CI]
gi|364513534|gb|AEW56933.1| 50S ribosomal subunit maturation GTPase RbgA [Bacillus cereus
F837/76]
gi|401190029|gb|EJQ97079.1| ribosome biogenesis GTPase A [Bacillus cereus ISP3191]
Length = 296
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|323451733|gb|EGB07609.1| hypothetical protein AURANDRAFT_27328 [Aureococcus anophagefferens]
Length = 389
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 130/221 (58%), Gaps = 12/221 (5%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGHIA+ E+EL+D LK +DVVIE RDARI +T HP + +W+G R R++V D+
Sbjct: 52 INWYPGHIARAERELRDYLKRVDVVIEARDARIGATTAHPDVSEWIGARPRVVVFTFADL 111
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASD---VNVKRRSKGLLPR 216
W ++ V F + + G G L + L VN KR KG++PR
Sbjct: 112 APANVVRDWKEELSRD-VPVFFVDAKRG-GAKALQGIRNELTKAGRVVNEKRAKKGIMPR 169
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-----GKDL--EFLDS 269
A R ++GYPNVGKS+LIN+L R+ + + GVTR L WVR GK L E LDS
Sbjct: 170 AARVAVIGYPNVGKSALINKLAGRKAAKSENKAGVTRSLNWVRSKPSTQGKGLPFELLDS 229
Query: 270 PGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
PGIIP + +Q A +LAIC DIG+ SYD VA LV+ L
Sbjct: 230 PGIIPAKQLNQRMAARLAICGDIGDASYDTRLVAEALVEEL 270
>gi|404418476|ref|ZP_11000243.1| GTPase YlqF [Staphylococcus arlettae CVD059]
gi|403489069|gb|EJY94647.1| GTPase YlqF [Staphylococcus arlettae CVD059]
Length = 290
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 134/213 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVTEQLKKVDVVFELVDARIPYSSRNPMIDEVIQQKPRVIILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +YF+ QG + + + G G ++ + A D K R KGL PRA+R
Sbjct: 63 ANLKELEKWQSYFSAQGNFPVAVDAKHGKGLKQVEQAAIQATEDKFAKEREKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANRAIAKTGNTPGVTKQQQWIKIGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KL+I I + + +VA ++ L +
Sbjct: 183 QLVGKKLSITGAIKDSIVHLDEVAIYGLEFLKQ 215
>gi|311068126|ref|YP_003973049.1| ribosomal biogenesis GTPase [Bacillus atrophaeus 1942]
gi|419823894|ref|ZP_14347427.1| GTPase YlqF [Bacillus atrophaeus C89]
gi|310868643|gb|ADP32118.1| ribosomal biogenesis GTPase [Bacillus atrophaeus 1942]
gi|388471931|gb|EIM08721.1| GTPase YlqF [Bacillus atrophaeus C89]
Length = 281
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 136/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEEILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F KQG + + G G ++ +K L + KR++KG+ PRA+R
Sbjct: 63 ADAAVTKQWKEHFEKQGIPSLSIDSVNGQGLNQIVPSSKELLQEKIDKRKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITISQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LAI I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAITGAIKDSIINLQDVAVFGLRFL 213
>gi|435853380|ref|YP_007314699.1| ribosome biogenesis GTP-binding protein YlqF [Halobacteroides
halobius DSM 5150]
gi|433669791|gb|AGB40606.1| ribosome biogenesis GTP-binding protein YlqF [Halobacteroides
halobius DSM 5150]
Length = 286
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 133/214 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK K++K++L L+DVVIE+ DARIP+S+ +P +DQ L +++RI+ LN++D+
Sbjct: 3 IQWYPGHMAKAMKKVKNRLDLIDVVIELLDARIPISSRNPDLDQLLEDKRRIIALNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N W YF+ QG V N G G KL LA L D + ++G + +R
Sbjct: 63 ANQGLTNQWQEYFSNQGISVAAMNSLNGKGVKKLFALANQLMVDKQKELAAQGRKRKDIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS LIN+L ++ +PGVT+ +W++ + E LD+PG++ + +
Sbjct: 123 LMIVGIPNVGKSQLINQLSQKGATRTGNKPGVTKAQQWIKLKEGFELLDTPGVLWPKFEE 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +KLAIC I E ++D +A LV+ML I
Sbjct: 183 QEVGVKLAICGAIKEGNFDSELLAYKLVEMLQDI 216
>gi|229162774|ref|ZP_04290731.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus R309803]
gi|228620656|gb|EEK77525.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus R309803]
Length = 296
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 135/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA + + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYAFRFMEK 215
>gi|403234817|ref|ZP_10913403.1| GTPase YlqF [Bacillus sp. 10403023]
Length = 280
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++L L+D+V E+ DARIP S+ +P++D+ + N+ R+L+LN+ D
Sbjct: 3 IQWFPGHMAKARRQVTEKLSLIDIVFELVDARIPASSRNPMIDEIIKNKPRLLLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +Y+ + G + N Q G G ++ AK + +D K +KG+ PRA+R
Sbjct: 63 ADPKVTKEWISYYKESGVHALAINSQAGEGMKQIVNEAKVILTDKFDKMAAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + RPG+T+ W++ GK+LE LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRLAKKNIAQTGDRPGITKAQSWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KLA I + ++ D+A ++ L
Sbjct: 183 QEVGLKLATTGAIKDTILNLQDIAVYALRFL 213
>gi|407977608|ref|ZP_11158445.1| GTPase YlqF [Bacillus sp. HYC-10]
gi|407415861|gb|EKF37442.1| GTPase YlqF [Bacillus sp. HYC-10]
Length = 282
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 136/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ +I++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQNKPKIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG + + N G G ++ ++K + + + ++KG+ PRA+R
Sbjct: 63 ADPRMTKEWQAHFEKQGVRSLAINSVDGQGLNQIITISKEILKEKFDRMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL KR + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKRNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 EQVGLRLAVTGAIKDSIINLQDVAVYALRFL 213
>gi|177656002|ref|ZP_02937129.1| GTPase family protein [Bacillus anthracis str. A0174]
gi|254735876|ref|ZP_05193582.1| ribosomal biogenesis GTPase [Bacillus anthracis str. Western North
America USA6153]
gi|172079901|gb|EDT65009.1| GTPase family protein [Bacillus anthracis str. A0174]
Length = 296
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 135/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PR +R
Sbjct: 63 ADARLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRVIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|154686021|ref|YP_001421182.1| ribosomal biogenesis GTPase [Bacillus amyloliquefaciens FZB42]
gi|384265188|ref|YP_005420895.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385264731|ref|ZP_10042818.1| ribosomal biogenesis GTPase [Bacillus sp. 5B6]
gi|387898184|ref|YP_006328480.1| ribosomal biogenesis GTPase [Bacillus amyloliquefaciens Y2]
gi|154351872|gb|ABS73951.1| YlqF [Bacillus amyloliquefaciens FZB42]
gi|380498541|emb|CCG49579.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|385149227|gb|EIF13164.1| ribosomal biogenesis GTPase [Bacillus sp. 5B6]
gi|387172294|gb|AFJ61755.1| ribosomal biogenesis GTPase [Bacillus amyloliquefaciens Y2]
Length = 282
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEEILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F +QG + N G G ++ +K L D K ++KG+ PRA+R
Sbjct: 63 ADAAVTAQWKDHFQEQGIPSLSINSVNGQGLHQIVPSSKELLKDKFDKMKAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LAI I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAITGAIKDTIINLQDVAVFGLRFL 213
>gi|229031468|ref|ZP_04187468.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH1271]
gi|228729757|gb|EEL80737.1| Ras superfamily GTP-binding protein YlqF [Bacillus cereus AH1271]
Length = 296
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 135/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++ I N Q G G +++ K L + K +KG+ PRA+R
Sbjct: 63 ADDRLTKQWIAYFKEKDQMAISINAQAGQGMKEIAAACKVLVKEKFDKMAAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + ++ DVA ++ + +
Sbjct: 183 QLVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|394993944|ref|ZP_10386683.1| GTPase YlqF [Bacillus sp. 916]
gi|429505157|ref|YP_007186341.1| GTPase YlqF [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|452855551|ref|YP_007497234.1| ribosome biogenesis GTPase A [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|393805268|gb|EJD66648.1| GTPase YlqF [Bacillus sp. 916]
gi|429486747|gb|AFZ90671.1| GTPase YlqF [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|452079811|emb|CCP21569.1| ribosome biogenesis GTPase A [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 282
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEEILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F +QG + N G G ++ +K L D K ++KG+ PRA+R
Sbjct: 63 ADAAVTAQWKDHFQEQGIPSLSINSVNGQGLHQIVPSSKELLKDKFDKMKAKGVRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LAI I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAITGAIKDTIINLQDVAVFGLRFL 213
>gi|452995936|emb|CCQ92337.1| ribosome biogenesis GTPase A [Clostridium ultunense Esp]
Length = 286
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 139/211 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++++LK++D+V E+ DARIP ++ +P+MD+ +G++ RI++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVEERLKIIDIVFELLDARIPSASQNPMMDEIVGHKPRIILLNKYDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W ++F ++G + + G G + +LA++L V KR++KG+ RA+R
Sbjct: 63 SDPAVTKEWVSFFERKGGHALPIDSLSGRGLETIPKLAESLTQSVQDKRQAKGMKGRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKSSLINRL KR + RPGVT+ +W++ GK+L+ LD+PGI+ + +
Sbjct: 123 AMIVGIPNVGKSSLINRLAKRSVAQTGDRPGVTKSQQWIKTGKNLDLLDTPGILWPKFGE 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA I + D+ DVA ++++
Sbjct: 183 ERVGYLLAATGAIRDEILDIYDVALFTLKIM 213
>gi|375362249|ref|YP_005130288.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421731725|ref|ZP_16170848.1| GTPase YlqF [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451347024|ref|YP_007445655.1| GTPase YlqF [Bacillus amyloliquefaciens IT-45]
gi|371568243|emb|CCF05093.1| GTP-binding protein engA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407073938|gb|EKE46928.1| GTPase YlqF [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449850782|gb|AGF27774.1| GTPase YlqF [Bacillus amyloliquefaciens IT-45]
Length = 282
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEEILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F +QG + N G G ++ +K L D K ++KG+ PRA+R
Sbjct: 63 ADAAVTAQWKDHFQEQGIPSLSINSVNGQGLHQIVPSSKELLKDKFDKMKAKGVRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LAI I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAITGAIKDTIINLQDVAVFGLRFL 213
>gi|418033249|ref|ZP_12671726.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|351469397|gb|EHA29573.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
SC-8]
Length = 282
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F KQG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFEKQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|49478407|ref|YP_037899.1| ribosomal biogenesis GTPase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|49329963|gb|AAT60609.1| conserved hypothetical protein, GTPase family [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 296
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PR++R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRSIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|428279199|ref|YP_005560934.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. natto
BEST195]
gi|291484156|dbj|BAI85231.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. natto
BEST195]
Length = 282
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F KQG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQRWKEHFEKQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|30263841|ref|NP_846218.1| ribosomal biogenesis GTPase [Bacillus anthracis str. Ames]
gi|47529266|ref|YP_020615.1| ribosomal biogenesis GTPase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186688|ref|YP_029940.1| ribosomal biogenesis GTPase [Bacillus anthracis str. Sterne]
gi|65321165|ref|ZP_00394124.1| COG1161: Predicted GTPases [Bacillus anthracis str. A2012]
gi|170689661|ref|ZP_02880841.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|170709354|ref|ZP_02899768.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|227813254|ref|YP_002813263.1| ribosomal biogenesis GTPase [Bacillus anthracis str. CDC 684]
gi|229600440|ref|YP_002868075.1| ribosomal biogenesis GTPase [Bacillus anthracis str. A0248]
gi|254683455|ref|ZP_05147315.1| ribosomal biogenesis GTPase [Bacillus anthracis str. CNEVA-9066]
gi|254751310|ref|ZP_05203347.1| ribosomal biogenesis GTPase [Bacillus anthracis str. Vollum]
gi|254759310|ref|ZP_05211335.1| ribosomal biogenesis GTPase [Bacillus anthracis str. Australia 94]
gi|386737660|ref|YP_006210841.1| Ras superfamily GTP-binding protein YlqF [Bacillus anthracis str.
H9401]
gi|421507377|ref|ZP_15954297.1| GTPase YlqF [Bacillus anthracis str. UR-1]
gi|421639593|ref|ZP_16080184.1| GTPase YlqF [Bacillus anthracis str. BF1]
gi|30258485|gb|AAP27704.1| GTPase family protein [Bacillus anthracis str. Ames]
gi|47504414|gb|AAT33090.1| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180615|gb|AAT55991.1| GTPase family protein [Bacillus anthracis str. Sterne]
gi|170125728|gb|EDS94641.1| GTPase family protein [Bacillus anthracis str. A0389]
gi|170666385|gb|EDT17168.1| GTPase family protein [Bacillus anthracis str. A0465]
gi|227002777|gb|ACP12520.1| GTPase family protein [Bacillus anthracis str. CDC 684]
gi|229264848|gb|ACQ46485.1| GTPase family protein [Bacillus anthracis str. A0248]
gi|384387512|gb|AFH85173.1| Ras superfamily GTP-binding protein YlqF [Bacillus anthracis str.
H9401]
gi|401822511|gb|EJT21661.1| GTPase YlqF [Bacillus anthracis str. UR-1]
gi|403393258|gb|EJY90503.1| GTPase YlqF [Bacillus anthracis str. BF1]
Length = 296
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 135/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+PLS+ +P++D+ + ++ R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G I N Q G G +++ K L + K +KG+ PR +R
Sbjct: 63 ADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRVIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + RPGVT +W++ GK++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ ++LA I + ++ DVA ++ + +
Sbjct: 183 ELVGLRLATTGAIKDSILNLQDVAVYALRFMEK 215
>gi|335038410|ref|ZP_08531661.1| ribosome biogenesis GTP-binding protein YlqF [Caldalkalibacillus
thermarum TA2.A1]
gi|334181699|gb|EGL84213.1| ribosome biogenesis GTP-binding protein YlqF [Caldalkalibacillus
thermarum TA2.A1]
Length = 290
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ ++LKL+DVVIE+ DAR+P S+ +P+MD+ + ++ R+++LN++D+
Sbjct: 3 IQWYPGHMAKAKRQVMEKLKLIDVVIELLDARLPFSSQNPMMDELVKDKPRLVLLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F K+ + + + Q G G + + LA D+ K KG+ PR +R
Sbjct: 63 ADPSVTEKWLRFFEKKAFQALAVDAQSGNGIKAIPSACQTLARDIMKKMTDKGMKPRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKSSLINRL KR + RPGVT+ +W++ G LE LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSSLINRLAKRHVAKTGDRPGVTKAQQWIKTGHGLELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+KLA I + +VA + L R+
Sbjct: 183 PLVGLKLAASGAIRDEILPKEEVALFAIDFLRRV 216
>gi|403383360|ref|ZP_10925417.1| hypothetical protein KJC30_01635 [Kurthia sp. JC30]
Length = 284
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 133/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ + LKL+D+V E+ DAR+P+S+ +P++D + + R+L+LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTENLKLVDIVFELIDARLPMSSRNPMLDDIIHQKNRLLILNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YFA +G K + N G ++++ A+ + ++ + R KGL RA+R
Sbjct: 63 ADEAQTKKWINYFASKGHKAVAVNSLDSKGLKRVTKAAEEVLAEKWERMRKKGLKTRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS++INRL K+ + PGVTR +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTMINRLAKKNVARTGNMPGVTRSQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I ++ ++ D+A + L
Sbjct: 183 QNVGYKLAVTGAIKDQIMNMDDLAIFGLNFL 213
>gi|410456957|ref|ZP_11310804.1| GTPase YlqF [Bacillus bataviensis LMG 21833]
gi|409926931|gb|EKN64082.1| GTPase YlqF [Bacillus bataviensis LMG 21833]
Length = 290
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 136/213 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D++ E+ DARIP S+ +P++D+ + ++ R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLVDIIFELVDARIPYSSRNPMIDEIIQHKPRLVLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +YFA +G K + N Q G G + + + + + + ++KG+ PRA+R
Sbjct: 63 ADPSATKEWISYFADKGIKALAINSQAGEGMKNIVQASHEILKEKFDRLKAKGVNPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN GKS+LINRL K+ + PGVT+ +W++ GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNAGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLAI I + ++ D+ ++ L +
Sbjct: 183 QEVGMKLAITGAIKDTLLNLQDLTVYSLRFLEQ 215
>gi|449094297|ref|YP_007426788.1| ribosomal biogenesis GTPase [Bacillus subtilis XF-1]
gi|449028212|gb|AGE63451.1| ribosomal biogenesis GTPase [Bacillus subtilis XF-1]
Length = 282
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F KQG + + N G G ++ ++ + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFEKQGIRSLSINSVNGQGLNQIVPASREILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|392957506|ref|ZP_10323029.1| GTPase YlqF [Bacillus macauensis ZFHKF-1]
gi|391876469|gb|EIT85066.1| GTPase YlqF [Bacillus macauensis ZFHKF-1]
Length = 283
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 128/204 (62%), Gaps = 1/204 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DVV E+ DARIPL++ +P++D+ + R+L+LN+ DM
Sbjct: 3 IQWFPGHMAKARREITEKLKLIDVVFELVDARIPLASRNPMIDEITAGKPRLLLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W YF +G V+ N + G G K+ AK L + K ++KG++ PRAV
Sbjct: 63 ADPEATKQWVHYFENKGLPVLVLNAKTGQGINKIEAKAKELVKEKFDKMKAKGIVKPRAV 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA I+G PNVGKS+LINRL + + +PGVT+ +W++ G LE LD+PGI+ +
Sbjct: 123 RALILGIPNVGKSTLINRLAGKNIAVTGDKPGVTKKQQWIKVGTSLELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADV 302
DQ +KLA+ I E D +V
Sbjct: 183 DQEIGLKLAVTGAIKETLLDFTEV 206
>gi|443632726|ref|ZP_21116905.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443347549|gb|ELS61607.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 282
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F K+G + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFEKEGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFQD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|308173567|ref|YP_003920272.1| ribosome biogenesis GTPase A [Bacillus amyloliquefaciens DSM 7]
gi|384159412|ref|YP_005541485.1| GTPase YlqF [Bacillus amyloliquefaciens TA208]
gi|384164153|ref|YP_005545532.1| ribosome biogenesis GTPase A [Bacillus amyloliquefaciens LL3]
gi|384168459|ref|YP_005549837.1| ribosomal biogenesis GTPase [Bacillus amyloliquefaciens XH7]
gi|307606431|emb|CBI42802.1| ribosome biogenesis GTPase A [Bacillus amyloliquefaciens DSM 7]
gi|328553500|gb|AEB23992.1| GTPase YlqF [Bacillus amyloliquefaciens TA208]
gi|328911708|gb|AEB63304.1| ribosome biogenesis GTPase A [Bacillus amyloliquefaciens LL3]
gi|341827738|gb|AEK88989.1| ribosomal biogenesis GTPase [Bacillus amyloliquefaciens XH7]
Length = 282
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L ++ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEEILKDKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F +QG + N G G ++ +K L D K ++KG+ PRA+R
Sbjct: 63 ADAAVTAQWKDHFQEQGIPSLSINSVNGQGLHQIVPSSKELLKDKFDKMKAKGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LAI I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAITGAIKDTIINLQDVAVFGLRFL 213
>gi|321315371|ref|YP_004207658.1| GTPase YlqF [Bacillus subtilis BSn5]
gi|320021645|gb|ADV96631.1| GTPase YlqF [Bacillus subtilis BSn5]
Length = 282
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|222151078|ref|YP_002560232.1| ribosomal biogenesis GTPase [Macrococcus caseolyticus JCSC5402]
gi|222120201|dbj|BAH17536.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 290
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +QLKL+DVV E+ DARIP S+ +P++D+ + ++ R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEQLKLVDVVFELVDARIPYSSRNPMIDEVIKDKPRVVLLNKMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +YF +QG + + + G ++++ A+ + + + + KGL PRA+R
Sbjct: 63 ANLNETKKWMSYFEEQGFYPVLIDSKNGKNLSQVTKAAEIVTQEKFERMKQKGLRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKKSIAKTGNMPGVTKKQQWIKVGKTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KL++ I + + +VA + L
Sbjct: 183 QTVGKKLSLTGAIKDSIVHLDEVAIYGISFL 213
>gi|384175346|ref|YP_005556731.1| YlqF [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349594570|gb|AEP90757.1| YlqF [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 282
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAVVTQQWKEHFEKQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|16078668|ref|NP_389487.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
168]
gi|221309480|ref|ZP_03591327.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
168]
gi|221313805|ref|ZP_03595610.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221318729|ref|ZP_03600023.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323000|ref|ZP_03604294.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|350265918|ref|YP_004877225.1| hypothetical protein GYO_1956 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|386758328|ref|YP_006231544.1| ribosomal biogenesis GTPase [Bacillus sp. JS]
gi|402775850|ref|YP_006629794.1| ribosome biogenesis GTPase A [Bacillus subtilis QB928]
gi|430758972|ref|YP_007209693.1| hypothetical protein A7A1_3480 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|81555913|sp|O31743.1|RBGA_BACSU RecName: Full=Ribosome biogenesis GTPase A
gi|33358156|pdb|1PUJ|A Chain A, Structure Of B. Subtilis Ylqf Gtpase
gi|2633977|emb|CAB13478.1| ribosome biogenesis GTPase A [Bacillus subtilis subsp. subtilis
str. 168]
gi|349598805|gb|AEP86593.1| YlqF [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|384931610|gb|AFI28288.1| ribosomal biogenesis GTPase [Bacillus sp. JS]
gi|402481032|gb|AFQ57541.1| Ribosome biogenesis GTPase A [Bacillus subtilis QB928]
gi|407959011|dbj|BAM52251.1| ribosomal biogenesis GTPase [Synechocystis sp. PCC 6803]
gi|407964588|dbj|BAM57827.1| ribosomal biogenesis GTPase [Bacillus subtilis BEST7003]
gi|430023492|gb|AGA24098.1| Hypothetical protein YlqF [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 282
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|296330820|ref|ZP_06873295.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674338|ref|YP_003866010.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|338819266|sp|E0TTS5.1|RBGA_BACPZ RecName: Full=Ribosome biogenesis GTPase A
gi|296151825|gb|EFG92699.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412582|gb|ADM37701.1| ribosomal biogenesis GTPase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 282
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|403667643|ref|ZP_10932943.1| hypothetical protein KJC8E_02657 [Kurthia sp. JC8E]
Length = 284
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ + LKL+D+V E+ DAR+P+S+ +P++D+ + + R+L+LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTENLKLVDIVFELIDARLPMSSRNPMLDEIIHQKNRLLILNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G + I N G ++++ A+ + ++ + RSKGL PRA+R
Sbjct: 63 ADEVQTKKWIAYFESKGHRAIAVNSLDSKGLKRVTKAAEEVLAEKWERMRSKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS++INRL K+ + PGVTR +W++ GK LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTMINRLAKKNIARTGNMPGVTRSQQWIKVGKQLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I + ++ D+A +Q L
Sbjct: 183 PRVGYKLAVTGAIKDAIMNMDDLAIFGLQFL 213
>gi|383754889|ref|YP_005433792.1| putative ribosome biogenesis GTP-binding protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381366941|dbj|BAL83769.1| putative ribosome biogenesis GTP-binding protein [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 297
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++ +++ LKL+DVVIE+ DARIPLS+ +P++ + + ++ R++ LN+ D+
Sbjct: 9 LQWFPGHMKKAQRLIEENLKLVDVVIELLDARIPLSSANPMLAEIIKDKPRMIALNKSDL 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + G G +L ++A+ LA K SKG PRA R
Sbjct: 69 ADSASTKKWLDYFKAQGVPAVTIDSMKGKGMKQLVKVAEDLARPKTEKFVSKGAKPRAAR 128
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL AA +PGVTR +W++ G +L+ LD+PGI+ + D
Sbjct: 129 CMILGIPNVGKSSLINRLAGAVKAKAADKPGVTRAKQWIKIGTNLDLLDTPGILWPKFED 188
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLA I + YD V A+L+ ++ R
Sbjct: 189 QTVGLKLAFTGAINDDIYDREQVTALLLGIMRR 221
>gi|452914121|ref|ZP_21962748.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus subtilis
MB73/2]
gi|452116541|gb|EME06936.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus subtilis
MB73/2]
Length = 282
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|452974492|gb|EME74312.1| GTPase YlqF [Bacillus sonorensis L12]
Length = 282
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A N W +F G + N G G ++ +K L + K ++KG+ PRA+R
Sbjct: 63 ADSAVTNEWKKHFEADGIPSLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + RPGVT +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRLAKKNIAKTGDRPGVTTAQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +KLA I + ++ DVA ++ L
Sbjct: 183 ELVGLKLAATGAIKDSIINLQDVAVFGLRFL 213
>gi|398310701|ref|ZP_10514175.1| GTPase YlqF [Bacillus mojavensis RO-H-1]
Length = 282
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N G G ++ +K + + + R+KG+ PRA+R
Sbjct: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKDILQEKFDRMRAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
>gi|52080207|ref|YP_078998.1| ribosomal biogenesis GTPase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319646014|ref|ZP_08000244.1| YlqF protein [Bacillus sp. BT1B_CT2]
gi|404489095|ref|YP_006713201.1| GTPase YlqF [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423682148|ref|ZP_17656987.1| ribosomal biogenesis GTPase [Bacillus licheniformis WX-02]
gi|81609173|sp|Q65JP4.1|RBGA_BACLD RecName: Full=Ribosome biogenesis GTPase A
gi|52003418|gb|AAU23360.1| GTP-binding domain protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348086|gb|AAU40720.1| GTPase RbgA [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317391764|gb|EFV72561.1| YlqF protein [Bacillus sp. BT1B_CT2]
gi|383438922|gb|EID46697.1| ribosomal biogenesis GTPase [Bacillus licheniformis WX-02]
Length = 283
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 133/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P+++ L N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ AW +F K G + N G G ++ +K L + K ++KG+ PRA+R
Sbjct: 63 ADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + RPGVT +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRLAKKNIAKTGDRPGVTTAQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA I + ++ DVA ++ L
Sbjct: 183 ELVGLRLAATGAIKDSIINLQDVAVYGLRFL 213
>gi|365157121|ref|ZP_09353402.1| ribosome biogenesis GTPase A [Bacillus smithii 7_3_47FAA]
gi|363625855|gb|EHL76866.1| ribosome biogenesis GTPase A [Bacillus smithii 7_3_47FAA]
Length = 284
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 131/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DAR+PLS+ +P++D+ + + RI++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVFELVDARLPLSSRNPMIDEIIQQKPRIILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + I N Q G G ++ K L + + R++G+ PRAVR
Sbjct: 63 ADSDWTKEWIAYFKSRQLPAIAINSQEGQGLSQIMNKTKELLKEKFERMRARGIKPRAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL KR + PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKRNIAKTGNTPGVTKAQQWIKVEKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KLA+ I + ++ DVAA ++ L
Sbjct: 183 EEVGYKLALTGAIKDSIINLQDVAAYGLRFL 213
>gi|352517745|ref|YP_004887062.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
gi|348601852|dbj|BAK94898.1| putative GTP-binding protein [Tetragenococcus halophilus NBRC
12172]
Length = 282
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 136/215 (63%), Gaps = 2/215 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++ +++K +D+V E+ D R+P+S+ +P++D+ L + R++++N+ D+
Sbjct: 3 IQWFPGHMAKAKRQVSEKIKHVDIVFELVDGRLPISSRNPMLDEILQQKPRLVLINKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMK-LSRLAKALASDVNVKRRSKGLLPRAV 218
A W TYF +QG + N Q G+ L + +ALA + + + KGL PRA+
Sbjct: 63 ADPAQTKKWETYFNEQGYAALAINSQDNKGSKSILPKTKEALAEKLQ-REQEKGLKPRAI 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA ++G PNVGKS+L+NRL ++M +PGVT+ +W+R+ KDLE LD+PGI+ +
Sbjct: 122 RAMVIGIPNVGKSTLLNRLAGKKMAQTGNKPGVTKGQQWIRYKKDLELLDTPGILWPKFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
DQ KLA+ I ++ + D+A ++ +
Sbjct: 182 DQEIGKKLALTGAIKDQLFHQDDIAIYALEFFKQF 216
>gi|307244391|ref|ZP_07526502.1| ribosome biogenesis GTP-binding protein YlqF [Peptostreptococcus
stomatis DSM 17678]
gi|306492210|gb|EFM64252.1| ribosome biogenesis GTP-binding protein YlqF [Peptostreptococcus
stomatis DSM 17678]
Length = 294
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 128/214 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT + +++ LKL+DVVIE+ DARIPLS+ +P +D+ +G++ RI++LN+ DM
Sbjct: 15 INWYPGHMKKTRELVQNNLKLVDVVIELLDARIPLSSKNPDIDRLVGDKPRIVLLNKADM 74
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+AW YFAK+ K I N G G K+ KA+ + KG RA+R
Sbjct: 75 CEKPAIDAWVAYFAKEDVKAIPINAMTGTGVNKVISECKAVTRSMMESLAEKGRRERAIR 134
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L RR RPGVT+ +WV+ D+E LD+PGI+ + D
Sbjct: 135 IMIVGVPNVGKSSLINKLSGRRSTQTGDRPGVTKGKQWVKIRGDMELLDTPGILWPKFED 194
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + DV + L++ L I
Sbjct: 195 QEVALNLAFTRAIKDEILDVETLGLRLIERLMEI 228
>gi|389573273|ref|ZP_10163348.1| ribosomal biogenesis GTPase [Bacillus sp. M 2-6]
gi|388426970|gb|EIL84780.1| ribosomal biogenesis GTPase [Bacillus sp. M 2-6]
Length = 282
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ +I++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQNKPKIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F QG + + N G G ++ +K + + + ++KG+ PRA+R
Sbjct: 63 ADPRMTKEWQAHFEAQGVRSLAINSVDGQGLNQIITTSKEILKEKFDRMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK+LE LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 EQVGLRLAVTGAIKDSIINLQDVAVYALRFL 213
>gi|319649583|ref|ZP_08003739.1| GTPase [Bacillus sp. 2_A_57_CT2]
gi|317398745|gb|EFV79427.1| GTPase [Bacillus sp. 2_A_57_CT2]
Length = 290
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 135/212 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D++ E+ DARIP S+ +P++D+ + ++ R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLVDIIFELVDARIPYSSRNPMIDEIIQHKPRLVLLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +G + + N Q G G ++ ++++ + + ++KG+ PRA+R
Sbjct: 63 ADKEATKKWIKHFEDKGIRALAINSQAGQGMKEIVSASQSILQEKFDRMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN GKS+LINRL K+ + PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMIVGIPNAGKSTLINRLAKKNIARTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +KLA+ I + ++ DVA ++ L
Sbjct: 183 QEVGLKLALTGAIKDTILNLQDVAVYALRFLG 214
>gi|323489565|ref|ZP_08094792.1| hypothetical protein GPDM_09470 [Planococcus donghaensis MPA1U2]
gi|323396696|gb|EGA89515.1| hypothetical protein GPDM_09470 [Planococcus donghaensis MPA1U2]
Length = 288
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D++ E+ DAR+PLS+ +P++DQ + + R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLVDIIFELVDARLPLSSRNPMIDQVIQQKPRLIILNKMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QGT+ + N G G +++ +K + + + +KG+ PRA+R
Sbjct: 63 ADEVETKKWIRYFEDQGTRAVAINSLEGRGLQLVTKASKEILEEKWDRMIAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLSKKSLAKTGNMPGVTKAQQWIKVGKEIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+KLA+ I + + ++A ++ L
Sbjct: 183 PETGLKLAVTGAIKDSVIQMQELAIYALKFL 213
>gi|389815303|ref|ZP_10206649.1| hypothetical protein A1A1_01208 [Planococcus antarcticus DSM 14505]
gi|388466082|gb|EIM08391.1| hypothetical protein A1A1_01208 [Planococcus antarcticus DSM 14505]
Length = 289
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 134/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D++ E+ DAR+PLS+ +P++DQ + + R+++LN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLVDIIFELVDARLPLSSRNPMIDQVIQQKPRLIILNKMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG++ + N G G +++ +K + D + +KG+ PRA+R
Sbjct: 63 ADEVETKKWIRYFEDQGSRAVAINSLEGRGLQLVTKASKEILEDKWDRMIAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + PGVT+ +W++ GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLSKKSLAKTGNMPGVTKAQQWIKVGKEIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+KLA+ I + + ++A ++ L
Sbjct: 183 PETGLKLAVTGAIKDSVIQMQELAIYSLKFL 213
>gi|325570948|ref|ZP_08146567.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus
casseliflavus ATCC 12755]
gi|325156274|gb|EGC68458.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus
casseliflavus ATCC 12755]
Length = 309
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LK +D+V E+ DAR+P+S+ +P++DQ L + R++++N+ D+
Sbjct: 24 IQWFPGHMAKARREVSEKLKFVDIVFELVDARLPISSRNPMLDQLLQQKPRLILINKADL 83
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N Q G + AK + + + +++GL PRA+R
Sbjct: 84 ADPVQTKKWEHYFQAQGYLALAINAQDNQGVKAIVPTAKQVLKEKIARDKARGLKPRAIR 143
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+RFG DLE LD+PGI+ + D
Sbjct: 144 AMVIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRFGTDLELLDTPGILWPKFED 203
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
KLA+ I ++ + D+A + AR
Sbjct: 204 PEIGKKLALTGAIKDQLIHLDDIALYGLDFFAR 236
>gi|157692284|ref|YP_001486746.1| ribosomal biogenesis GTPase [Bacillus pumilus SAFR-032]
gi|338819265|sp|A8FD69.1|RBGA_BACP2 RecName: Full=Ribosome biogenesis GTPase A
gi|157681042|gb|ABV62186.1| GTP-binding protein [Bacillus pumilus SAFR-032]
Length = 282
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++++ L N+ +I++LN+ D
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDIVFELTDARIPMSSRNPMIEEILQNKPKIMLLNKADK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +QG + + N G G ++ +K + + + ++KG+ PRA+R
Sbjct: 63 ADPRVTKEWQAHFEQQGVRSLAINSVDGQGLNQIITTSKEILKEKFDRMKAKGVKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL K+ + RPG+T +WV+ GK++E LD+PGI+ + D
Sbjct: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA+ I + ++ DVA ++ L
Sbjct: 183 EKVGLRLAVTGAIKDSIINLQDVAVYGLRFL 213
>gi|257867804|ref|ZP_05647457.1| GTP-binding protein [Enterococcus casseliflavus EC30]
gi|257874131|ref|ZP_05653784.1| GTP-binding protein [Enterococcus casseliflavus EC10]
gi|257876696|ref|ZP_05656349.1| GTP-binding protein [Enterococcus casseliflavus EC20]
gi|420263140|ref|ZP_14765779.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp. C1]
gi|257801887|gb|EEV30790.1| GTP-binding protein [Enterococcus casseliflavus EC30]
gi|257808295|gb|EEV37117.1| GTP-binding protein [Enterococcus casseliflavus EC10]
gi|257810862|gb|EEV39682.1| GTP-binding protein [Enterococcus casseliflavus EC20]
gi|394769774|gb|EJF49608.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp. C1]
Length = 288
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LK +D+V E+ DAR+P+S+ +P++DQ L + R++++N+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKLKFVDIVFELVDARLPISSRNPMLDQLLQQKPRLILINKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N Q G + AK + + + +++GL PRA+R
Sbjct: 63 ADPVQTKKWEHYFQAQGYLALAINAQDNQGVKAIVPTAKQVLKEKIARDKARGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+RFG DLE LD+PGI+ + D
Sbjct: 123 AMVIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRFGTDLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
KLA+ I ++ + D+A + AR
Sbjct: 183 PEIGKKLALTGAIKDQLIHLDDIALYGLDFFAR 215
>gi|289550966|ref|YP_003471870.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus
lugdunensis HKU09-01]
gi|385784593|ref|YP_005760766.1| putative GTPase protein [Staphylococcus lugdunensis N920143]
gi|418414268|ref|ZP_12987483.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|289180498|gb|ADC87743.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus
lugdunensis HKU09-01]
gi|339894849|emb|CCB54146.1| putative GTPase protein [Staphylococcus lugdunensis N920143]
gi|410876875|gb|EKS24772.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 294
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W YF +QG + + + G + A D K ++KGL PRA+R
Sbjct: 63 TNLKEMSKWEHYFVEQGFYPVAVDAKHGKNLKGVEAAAIEATKDKFAKEQAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L ++ + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLARKNIAQTGNKPGVTKQQQWIKVGKVLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + DVA ++ L
Sbjct: 183 ELVGKKLSLTGAIKDSIVHLDDVAIFVLNFL 213
>gi|424761234|ref|ZP_18188816.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
R508]
gi|402402218|gb|EJV34939.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
R508]
Length = 314
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 34 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 93
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 94 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 153
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 154 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 213
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 214 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 247
>gi|373115378|ref|ZP_09529552.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 7_1_58FAA]
gi|371670444|gb|EHO35525.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 294
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 132/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ KT ++++ LKL+D+V E+ DARIP+S+ +P +D+ +G + R++VLNR D
Sbjct: 3 IQWYPGHMTKTRRQIQADLKLVDLVAEIIDARIPISSRNPDIDELVGEKPRLIVLNRADQ 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F +QG V+ +N + G G + S + + + + ++KGL+ R VR
Sbjct: 63 ADPAMNRVWTDWFRRQGWAVLETNARDGKGVGQFSTVIRQALKEKLEQWKAKGLVGRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ KR+ A RPGVTR +WV LE LD+PGI+ + D
Sbjct: 123 AMVVGVPNVGKSTFINQVAKRKSAKAGNRPGVTRGKQWVSVDAGLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LA + + D+ +A L+++LAR
Sbjct: 183 ETTGIHLAFTGAVKDEIMDLETLACHLIELLAR 215
>gi|406670839|ref|ZP_11078084.1| ribosome biogenesis GTP-binding protein YlqF [Facklamia hominis
CCUG 36813]
gi|405582355|gb|EKB56361.1| ribosome biogenesis GTP-binding protein YlqF [Facklamia hominis
CCUG 36813]
Length = 282
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 133/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E ++++KL+D+VIE+ DARIP S+ +P++ + +G + +L+LN+ D+
Sbjct: 4 IQWYPGHMAKAKREAQEKIKLVDLVIELADARIPESSRNPIIQEIIGQKPSLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG + + + Q T ++R+ + D KR++KG+ PRA+R
Sbjct: 64 ADPATTRAWEDYYRSQGQQALSLDAQHLRSTKAINRVIQDQMQDFFAKRKAKGIKPRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINR + + +PGVT+ +W++ GK+ E LD+PGI+ + D
Sbjct: 124 LMILGIPNVGKSTLINRFVGKNQAQTGNKPGVTKAQRWLKIGKEFELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
LA+ I ++ + ++A +L++ L
Sbjct: 184 PMTGHHLALTGAIKDQLLPMQELALVLIEQL 214
>gi|289423553|ref|ZP_06425354.1| ribosome biogenesis GTP-binding protein YlqF [Peptostreptococcus
anaerobius 653-L]
gi|429728184|ref|ZP_19262924.1| ribosome biogenesis GTP-binding protein YlqF [Peptostreptococcus
anaerobius VPI 4330]
gi|289156055|gb|EFD04719.1| ribosome biogenesis GTP-binding protein YlqF [Peptostreptococcus
anaerobius 653-L]
gi|429150375|gb|EKX93289.1| ribosome biogenesis GTP-binding protein YlqF [Peptostreptococcus
anaerobius VPI 4330]
Length = 295
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 130/214 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT + +++ LKL+D+V+E+ DARIPLS+ +P +D+ +G++ RI++LN+ DM
Sbjct: 15 INWYPGHMKKTRELVQNNLKLVDIVVELLDARIPLSSKNPDIDRLVGDKPRIILLNKADM 74
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
D + W +YF+ +G K I N G G KL + + +D+ K KG R +R
Sbjct: 75 CKKEDLDKWISYFSSEGVKAITINAMTGKGVDKLVSECREVTADMMEKLAEKGRNQRPIR 134
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ RPGVT+ +WV+ ++E LD+PGI+ + D
Sbjct: 135 LMIVGVPNVGKSSLINKLSGRKSTQTGDRPGVTKGKQWVKVRGNMELLDTPGILWPKFDD 194
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D+ + L++ L I
Sbjct: 195 QRVALNLAFTRAIKDEILDIETLGLRLIERLMEI 228
>gi|29376208|ref|NP_815362.1| GTPase [Enterococcus faecalis V583]
gi|255972708|ref|ZP_05423294.1| GTP-binding protein [Enterococcus faecalis T1]
gi|255975760|ref|ZP_05426346.1| GTP-binding protein [Enterococcus faecalis T2]
gi|256619149|ref|ZP_05475995.1| GTP-binding protein [Enterococcus faecalis ATCC 4200]
gi|256853211|ref|ZP_05558581.1| GTP-binding protein [Enterococcus faecalis T8]
gi|256959065|ref|ZP_05563236.1| GTP-binding protein [Enterococcus faecalis DS5]
gi|256961842|ref|ZP_05566013.1| GTP-binding protein [Enterococcus faecalis Merz96]
gi|257079096|ref|ZP_05573457.1| GTP-binding protein [Enterococcus faecalis JH1]
gi|257082465|ref|ZP_05576826.1| GTP-binding protein [Enterococcus faecalis E1Sol]
gi|257085097|ref|ZP_05579458.1| GTP-binding protein [Enterococcus faecalis Fly1]
gi|257086658|ref|ZP_05581019.1| GTP-binding protein [Enterococcus faecalis D6]
gi|257416179|ref|ZP_05593173.1| GTP-binding protein [Enterococcus faecalis ARO1/DG]
gi|257419381|ref|ZP_05596375.1| GTP-binding protein [Enterococcus faecalis T11]
gi|257422525|ref|ZP_05599515.1| GTP-binding protein [Enterococcus faecalis X98]
gi|294781633|ref|ZP_06746969.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
PC1.1]
gi|300861139|ref|ZP_07107226.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TUSoD Ef11]
gi|384518682|ref|YP_005705987.1| ribosomal biogenesis GTPase [Enterococcus faecalis 62]
gi|397699964|ref|YP_006537752.1| ribosomal biogenesis GTPase [Enterococcus faecalis D32]
gi|421512269|ref|ZP_15959079.1| 50S ribosomal subunit maturation GTPase RbgA ( YlqF) [Enterococcus
faecalis ATCC 29212]
gi|428767091|ref|YP_007153202.1| GTP-binding protein [Enterococcus faecalis str. Symbioflor 1]
gi|430370587|ref|ZP_19429112.1| GTP-binding protein [Enterococcus faecalis M7]
gi|29343671|gb|AAO81432.1| GTPase of unknown function [Enterococcus faecalis V583]
gi|255963726|gb|EET96202.1| GTP-binding protein [Enterococcus faecalis T1]
gi|255968632|gb|EET99254.1| GTP-binding protein [Enterococcus faecalis T2]
gi|256598676|gb|EEU17852.1| GTP-binding protein [Enterococcus faecalis ATCC 4200]
gi|256711670|gb|EEU26708.1| GTP-binding protein [Enterococcus faecalis T8]
gi|256949561|gb|EEU66193.1| GTP-binding protein [Enterococcus faecalis DS5]
gi|256952338|gb|EEU68970.1| GTP-binding protein [Enterococcus faecalis Merz96]
gi|256987126|gb|EEU74428.1| GTP-binding protein [Enterococcus faecalis JH1]
gi|256990495|gb|EEU77797.1| GTP-binding protein [Enterococcus faecalis E1Sol]
gi|256993127|gb|EEU80429.1| GTP-binding protein [Enterococcus faecalis Fly1]
gi|256994688|gb|EEU81990.1| GTP-binding protein [Enterococcus faecalis D6]
gi|257158007|gb|EEU87967.1| GTP-binding protein [Enterococcus faecalis ARO1/DG]
gi|257161209|gb|EEU91169.1| GTP-binding protein [Enterococcus faecalis T11]
gi|257164349|gb|EEU94309.1| GTP-binding protein [Enterococcus faecalis X98]
gi|294451329|gb|EFG19795.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
PC1.1]
gi|295113050|emb|CBL31687.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
7L76]
gi|300850178|gb|EFK77928.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TUSoD Ef11]
gi|323480815|gb|ADX80254.1| ribosomal biogenesis GTPase [Enterococcus faecalis 62]
gi|397336603|gb|AFO44275.1| ribosomal biogenesis GTPase [Enterococcus faecalis D32]
gi|401674613|gb|EJS80961.1| 50S ribosomal subunit maturation GTPase RbgA ( YlqF) [Enterococcus
faecalis ATCC 29212]
gi|427185264|emb|CCO72488.1| GTP-binding protein [Enterococcus faecalis str. Symbioflor 1]
gi|429515351|gb|ELA04867.1| GTP-binding protein [Enterococcus faecalis M7]
Length = 283
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 63 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 183 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 216
>gi|256762585|ref|ZP_05503165.1| GTP-binding protein, partial [Enterococcus faecalis T3]
gi|256683836|gb|EEU23531.1| GTP-binding protein [Enterococcus faecalis T3]
Length = 278
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 18 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 77
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 78 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 137
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 138 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 197
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 198 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 231
>gi|256965039|ref|ZP_05569210.1| GTP-binding protein [Enterococcus faecalis HIP11704]
gi|257089970|ref|ZP_05584331.1| GTP-binding protein [Enterococcus faecalis CH188]
gi|256955535|gb|EEU72167.1| GTP-binding protein [Enterococcus faecalis HIP11704]
gi|256998782|gb|EEU85302.1| GTP-binding protein [Enterococcus faecalis CH188]
Length = 283
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 63 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 183 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 216
>gi|227518839|ref|ZP_03948888.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|227553456|ref|ZP_03983505.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|229545736|ref|ZP_04434461.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|229549925|ref|ZP_04438650.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|293382907|ref|ZP_06628825.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
R712]
gi|293389604|ref|ZP_06634061.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
S613]
gi|307270932|ref|ZP_07552215.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX4248]
gi|307274872|ref|ZP_07556035.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX2134]
gi|307277979|ref|ZP_07559063.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0860]
gi|307291910|ref|ZP_07571779.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0411]
gi|312899501|ref|ZP_07758831.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0470]
gi|312907623|ref|ZP_07766614.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
DAPTO 512]
gi|312910240|ref|ZP_07769087.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
DAPTO 516]
gi|312951584|ref|ZP_07770480.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0102]
gi|384513330|ref|YP_005708423.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
OG1RF]
gi|422685902|ref|ZP_16744115.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX4000]
gi|422692935|ref|ZP_16750950.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0031]
gi|422695067|ref|ZP_16753055.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX4244]
gi|422699129|ref|ZP_16757002.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1346]
gi|422701845|ref|ZP_16759685.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1342]
gi|422704561|ref|ZP_16762371.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1302]
gi|422706577|ref|ZP_16764275.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0043]
gi|422708558|ref|ZP_16766086.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0027]
gi|422714534|ref|ZP_16771260.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0309A]
gi|422715792|ref|ZP_16772508.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0309B]
gi|422719008|ref|ZP_16775659.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0017]
gi|422722435|ref|ZP_16778985.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX2137]
gi|422727138|ref|ZP_16783581.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0312]
gi|422728820|ref|ZP_16785226.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0012]
gi|422733485|ref|ZP_16789787.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0645]
gi|422734226|ref|ZP_16790520.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1341]
gi|422739090|ref|ZP_16794273.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX2141]
gi|422869271|ref|ZP_16915791.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1467]
gi|424673132|ref|ZP_18110075.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
599]
gi|424676678|ref|ZP_18113549.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV103]
gi|424681506|ref|ZP_18118293.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV116]
gi|424683696|ref|ZP_18120446.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV129]
gi|424686400|ref|ZP_18123068.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV25]
gi|424690328|ref|ZP_18126863.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV31]
gi|424695421|ref|ZP_18131804.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV37]
gi|424696840|ref|ZP_18133181.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV41]
gi|424699774|ref|ZP_18135985.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV62]
gi|424703213|ref|ZP_18139347.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV63]
gi|424707290|ref|ZP_18143274.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV65]
gi|424717050|ref|ZP_18146348.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV68]
gi|424720628|ref|ZP_18149729.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV72]
gi|424724176|ref|ZP_18153125.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV73]
gi|424733767|ref|ZP_18162322.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV81]
gi|424743934|ref|ZP_18172239.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV85]
gi|424750558|ref|ZP_18178622.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV93]
gi|430360682|ref|ZP_19426403.1| GTP-binding protein [Enterococcus faecalis OG1X]
gi|227073710|gb|EEI11673.1| GTP-binding protein [Enterococcus faecalis TX0104]
gi|227177413|gb|EEI58385.1| GTP-binding protein [Enterococcus faecalis HH22]
gi|229304938|gb|EEN70934.1| GTP-binding protein [Enterococcus faecalis ATCC 29200]
gi|229309186|gb|EEN75173.1| GTP-binding protein [Enterococcus faecalis TX1322]
gi|291079572|gb|EFE16936.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
R712]
gi|291081221|gb|EFE18184.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
S613]
gi|306496908|gb|EFM66456.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0411]
gi|306505376|gb|EFM74562.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0860]
gi|306508320|gb|EFM77427.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX2134]
gi|306512430|gb|EFM81079.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX4248]
gi|310626651|gb|EFQ09934.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
DAPTO 512]
gi|310630550|gb|EFQ13833.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0102]
gi|311289513|gb|EFQ68069.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
DAPTO 516]
gi|311293371|gb|EFQ71927.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0470]
gi|315027180|gb|EFT39112.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX2137]
gi|315029297|gb|EFT41229.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX4000]
gi|315034057|gb|EFT45989.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0017]
gi|315037066|gb|EFT48998.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0027]
gi|315145133|gb|EFT89149.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX2141]
gi|315147350|gb|EFT91366.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX4244]
gi|315150450|gb|EFT94466.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0012]
gi|315152394|gb|EFT96410.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0031]
gi|315155666|gb|EFT99682.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0043]
gi|315158163|gb|EFU02180.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0312]
gi|315160533|gb|EFU04550.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0645]
gi|315164102|gb|EFU08119.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1302]
gi|315168948|gb|EFU12965.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1341]
gi|315169818|gb|EFU13835.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1342]
gi|315172217|gb|EFU16234.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1346]
gi|315575778|gb|EFU87969.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0309B]
gi|315580430|gb|EFU92621.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0309A]
gi|327535219|gb|AEA94053.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
OG1RF]
gi|329571608|gb|EGG53289.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX1467]
gi|402351213|gb|EJU86105.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV116]
gi|402352942|gb|EJU87778.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
599]
gi|402356298|gb|EJU91032.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV103]
gi|402364455|gb|EJU98891.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV31]
gi|402364694|gb|EJU99129.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV129]
gi|402367254|gb|EJV01595.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV25]
gi|402368359|gb|EJV02675.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV37]
gi|402375703|gb|EJV09683.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV62]
gi|402377169|gb|EJV11080.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV41]
gi|402384888|gb|EJV18429.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV65]
gi|402385218|gb|EJV18758.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV63]
gi|402386398|gb|EJV19904.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV68]
gi|402391097|gb|EJV24413.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV81]
gi|402393099|gb|EJV26329.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV72]
gi|402395660|gb|EJV28747.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV73]
gi|402399610|gb|EJV32476.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV85]
gi|402406536|gb|EJV39086.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
ERV93]
gi|429512797|gb|ELA02394.1| GTP-binding protein [Enterococcus faecalis OG1X]
Length = 292
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 12 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 72 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 132 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 192 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 225
>gi|212639583|ref|YP_002316103.1| ribosomal biogenesis GTPase [Anoxybacillus flavithermus WK1]
gi|338819263|sp|B7GGD6.1|RBGA_ANOFW RecName: Full=Ribosome biogenesis GTPase A
gi|212561063|gb|ACJ34118.1| Predicted GTPase [Anoxybacillus flavithermus WK1]
Length = 284
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 132/213 (61%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E+ ++LKL+D+V E+ DARIP+S+ +PL+D+ + N+ RI++LN+ DM
Sbjct: 6 IQWFPGHMAKAKREVTEKLKLIDIVFELVDARIPMSSRNPLIDEIVANKPRIILLNKADM 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL-LPRAV 218
W +FA Q I + Q G G ++ +AK K +KG+ PRA+
Sbjct: 66 ADPDVTKQWVDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRSKFEKMMAKGMKRPRAM 125
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL + + PGVT+ +W++ GK+LE LD+PGI+ +
Sbjct: 126 RALIVGIPNVGKSTLINRLAGKHIAKTGDTPGVTKAQQWIKVGKELELLDTPGILWPKFE 185
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA I + ++ DVA ++ LA
Sbjct: 186 DEEVGYKLATTGAIKDTILNLQDVAVYALRFLA 218
>gi|340355018|ref|ZP_08677712.1| ribosome biogenesis GTP-binding protein YlqF [Sporosarcina
newyorkensis 2681]
gi|339622815|gb|EGQ27328.1| ribosome biogenesis GTP-binding protein YlqF [Sporosarcina
newyorkensis 2681]
Length = 284
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 134/212 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DAR+PLS+ +P++D+ + + R+L+LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKLKLVDIVFELIDARLPLSSRNPMIDEVIQQKPRLLILNKMDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF ++G + + N G G +++ AK + + + +G+ P A+R
Sbjct: 63 ADEVQTKRWIAYFEERGFRTVAINSFEGKGLQTVTKAAKEILQPKFDRMKQRGIRPGAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL K+ + +PGVT+ +W+++GK+LE LD+PG++ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLAKKNIAKTGNKPGVTKAQQWIKYGKELELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
KLA+ I + ++ ++A ++ L+
Sbjct: 183 PEVGFKLALTGAIKDSVLNMEELAVYGLRFLS 214
>gi|307289193|ref|ZP_07569149.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0109]
gi|306499902|gb|EFM69263.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0109]
Length = 292
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 12 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 72 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 132 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 192 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 225
>gi|307273137|ref|ZP_07554383.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0855]
gi|312903394|ref|ZP_07762574.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0635]
gi|422689281|ref|ZP_16747393.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0630]
gi|306510122|gb|EFM79146.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0855]
gi|310633270|gb|EFQ16553.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0635]
gi|315577620|gb|EFU89811.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecalis
TX0630]
Length = 292
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 132/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P+MDQ + + R+++LN+ D+
Sbjct: 12 IQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKGDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G + + N Q G K+ AK + + ++KGL PRA+R
Sbjct: 72 ADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRAIR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G LE LD+PGI+ + D
Sbjct: 132 AMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLA+ I ++ + D+A ++ AR
Sbjct: 192 EEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARF 225
>gi|401565318|ref|ZP_10806158.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp.
FOBRC6]
gi|400187907|gb|EJO22097.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp.
FOBRC6]
Length = 300
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVV+E+ DARIPLS+ +P++ + +G + R++VLN+ D+
Sbjct: 13 LQWYPGHMRKAERLVKENLKLVDVVLELLDARIPLSSANPVLREIVGEKPRLIVLNKADL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YFA QG + + G G +L + A K G RA R
Sbjct: 73 ADEAATRTWVKYFATQGLAAVPVDAVKGRGVKELVQAIAKCAKPKTDKLVQHGAKARAAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 133 CMILGIPNVGKSSLINRLSGGTKTKVENRPGVTRAKQWIRLGAQLELLDMPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+ LA I + YDVA V +L+ L
Sbjct: 193 QQAALHLAFTGAINDNVYDVASVVLLLLNTL 223
>gi|304404227|ref|ZP_07385889.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus
curdlanolyticus YK9]
gi|304347205|gb|EFM13037.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus
curdlanolyticus YK9]
Length = 290
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++D+LKL+D+ +E+ DARIPLS+ +P++D+ L N+ R++VL + D+
Sbjct: 3 IQWFPGHMTRARRQIQDKLKLIDIAVELLDARIPLSSRNPMVDEILLNKPRMIVLGKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ AW F +G + I + G ++ LAK L + K+ SKG+ PRAVR
Sbjct: 63 ADPRETEAWIERFKYEGHECIAVDASTGTRVGEIPGLAKKLLHEKIAKQLSKGINPRAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRLAGRNIAITGDRPGVTKGQQWIKVGTEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+LA+ I E+ ++ D+A
Sbjct: 183 PIVGYRLAMTGAIREQILNIEDIA 206
>gi|429736137|ref|ZP_19270054.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. oral
taxon 138 str. F0429]
gi|429156043|gb|EKX98684.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. oral
taxon 138 str. F0429]
Length = 300
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/211 (42%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVV+E+ DARIPLS+ +P++ + +G + R++VLN+ D+
Sbjct: 13 LQWYPGHMRKAERLVKENLKLVDVVLELLDARIPLSSANPVLREIVGEKPRLIVLNKADL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YFA QG + + G G +L + A K G RA R
Sbjct: 73 ADEAATRTWVKYFAAQGITAVPVDAVKGHGVKELVQAIAKCAKPKTDKLVQYGAKARAAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 133 CMILGIPNVGKSSLINRLSGGTKTKVENRPGVTRAKQWIRLGAQLELLDMPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+ LA I + YDVA V +L+ L
Sbjct: 193 QQAALHLAFTGAINDNVYDVASVVLLLLNTL 223
>gi|425736836|ref|ZP_18855112.1| GTPase YlqF [Staphylococcus massiliensis S46]
gi|425483308|gb|EKU50460.1| GTPase YlqF [Staphylococcus massiliensis S46]
Length = 288
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D ++ ++ R+++LN+ DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDDFIQHKPRVVILNKMDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W T+F +G + + + G K+ + A + + + KGL PRA+R
Sbjct: 63 SNLKEMEKWNTFFEDKGAFPVAVDAKHGKNLQKVEQAAIEATKEKFAREKEKGLRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN++ KR + PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKMAKRAIAKTGNTPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KL+I I + + DVA
Sbjct: 183 QTIGKKLSITGAIKDSIVHLDDVA 206
>gi|418637478|ref|ZP_13199798.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
lugdunensis VCU139]
gi|374838986|gb|EHS02518.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
lugdunensis VCU139]
Length = 294
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 131/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W YF +QG + + + G + A D K ++KGL PRA+R
Sbjct: 63 TNLKEMSKWEHYFVEQGFYPVAVDAKHGKNLKGVEAAAIEATKDKFAKEQAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L ++ + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLARKNIAQTGNKPGVTKQQQWIKVGKVLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + DVA + L
Sbjct: 183 ELVGKKLSLTGAIKDSIVHLDDVAIFGLNFL 213
>gi|374708839|ref|ZP_09713273.1| GTPase YlqF [Sporolactobacillus inulinus CASD]
Length = 288
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +++K +DVVIE+ D+R+P+S+ +PL+D+ + R+L++N+ DM
Sbjct: 3 IQWYPGHMAKAKRQMIEKIKQIDVVIELVDSRVPMSSRNPLVDEIASGKPRLLLMNKIDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YF G KV N Q G G + + L + K KG P A R
Sbjct: 63 ADRRATKAWQNYFEDHGLKVHLVNSQTGQGVSMIPEAVRQLTAARRKKLEDKGFRPHADR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL +R+ RPGVT +W++ GK +E LD+PGI+ + D
Sbjct: 123 ALILGIPNVGKSTLINRLAGKRIAKIGDRPGVTTAQQWIKVGKTMELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA I E D ++A L++ +
Sbjct: 183 PQVGLRLAATGAIKEELLDFQEIAFFLIKTM 213
>gi|414160551|ref|ZP_11416817.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878071|gb|EKS25960.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 289
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 129/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + N+ R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIQNKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W YF +G + + + G G + + A + + ++KGL PRA+R
Sbjct: 63 ANLNETAKWEDYFRSKGYFPVSVDAKHGKGLKSVEQAAVQATKEKFERDKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L + + PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANKAIAKTGNTPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KL++ I + + DVA
Sbjct: 183 QTVGKKLSLTGAIKDSIVHLDDVA 206
>gi|414154250|ref|ZP_11410569.1| Ribosome biogenesis GTPase A [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
gi|411454041|emb|CCO08473.1| Ribosome biogenesis GTPase A [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
Length = 286
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 131/212 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+A+ +++++ LKL+DV IE+ DARIP+S+ +PL++Q LG + R++VLN+ D+
Sbjct: 5 IQWFPGHMARARRQVQEALKLVDVAIELLDARIPVSSGNPLINQILGQKPRLVVLNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W + G KVI + G G ++ R A AL ++ K ++G PRA+R
Sbjct: 65 ADPALTKLWLKALERPGVKVIALDTLKGEGLKEVPRAAAALVAEQMAKLAARGRRPRAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKSS INRL+ R+ PGVT+ +W+R LE LD+PGI+ + D
Sbjct: 125 CLVLGIPNVGKSSFINRLVGRKAAKTGDLPGVTKGQQWIRVQGSLELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
KLAI I E+ +D+ +VA L+ LA
Sbjct: 185 PQVGYKLAITGAIKEQVFDIYEVAVRLLGWLA 216
>gi|427414160|ref|ZP_18904350.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella ratti
ACS-216-V-Col6b]
gi|425714536|gb|EKU77539.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella ratti
ACS-216-V-Col6b]
Length = 306
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 136/214 (63%), Gaps = 3/214 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + +K+ +K +DVVIE+ DARIP S+ +P++ + +G + I+VLN+ D+
Sbjct: 12 VHWFPGHMAKATRMIKEYVKKVDVVIELLDARIPRSSANPVISEVVGQKPHIVVLNKADL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF KQG V+ + + G G +L + + LA + K ++KG+ R+VR
Sbjct: 72 ANPQATKEWVAYFEKQGLTVLAIDSKTGKGNKQLVKAVERLAQPIIDKWKNKGIRSRSVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN+L A +PG TR +WV+ GKDLE LD+PG++ ++ D
Sbjct: 132 TIILGIPNVGKSTLINKLAGAAATRTADKPGHTRGQQWVKIGKDLELLDTPGVLWPKLED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA +LA+ G S DV D+ +++ Q+L ++
Sbjct: 192 QRAAARLAMT---GAISDDVYDLESVMKQLLNQV 222
>gi|402304192|ref|ZP_10823268.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp.
FOBRC9]
gi|400375431|gb|EJP28332.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp.
FOBRC9]
Length = 304
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVV+E+ DARIP+S+ +P++ + + + R++VLN+ D+
Sbjct: 13 LQWYPGHMRKAERLVKENLKLVDVVVELLDARIPMSSANPVLREIVAGKTRLIVLNKSDL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YFA Q + + G GT +L + + LA+ K G PRA R
Sbjct: 73 ADPTATRAWVQYFASQDIVAVPVDAVKGSGTKELVQAIQKLAAPRTEKLAKHGAKPRAAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 133 CMILGIPNVGKSSLINRLSGGARTKVENRPGVTRAKQWIRIGAQLELLDMPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
AA++LA I + YDV V L+++L
Sbjct: 193 AHAALRLAFTGAISDTVYDVGGVVLQLLRVL 223
>gi|348027363|ref|YP_004767168.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera elsdenii
DSM 20460]
gi|341823417|emb|CCC74341.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera elsdenii
DSM 20460]
Length = 287
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 138/212 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK ++ +++ LK++DVVIE+ DARIP+S+T+P++ +G++ I+VLN+ D+
Sbjct: 3 INWYPGHMAKAKRLIQENLKIIDVVIELVDARIPMSSTNPMIKSLIGDKPSIVVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A + W ++ +QG KV+ N + G G +L L ++LA+ + +++GL RAVR
Sbjct: 63 ADPAVLDEWVAHYKQQGRKVLALNSKGGKGVKQLISLVRSLAAPKLARWKARGLKNRAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN+L +R A +PG T+ +WV G L+ LD+PG++ ++ +
Sbjct: 123 TMILGIPNVGKSTLINKLSRRSAAKTADKPGETKGKQWVHIGDQLDLLDTPGVLWPKLEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +A +LA I + +D+ V LV+ L+
Sbjct: 183 QVSAYRLAATGAISDTVFDMETVLLQLVEQLS 214
>gi|320529142|ref|ZP_08030234.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas artemidis
F0399]
gi|320138772|gb|EFW30662.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas artemidis
F0399]
Length = 310
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +++ LKL+DVV+E+ DARIP+S+ +P++ + + + R++VLN+ D+
Sbjct: 19 LQWYPGHMRKAERLVQENLKLVDVVVELLDARIPMSSANPVLREIVAGKPRLVVLNKSDL 78
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW YFA Q + + G GT +L + + LA+ K G PRA R
Sbjct: 79 AEPAATRAWVQYFASQDIVAVPVDAVKGAGTKELVQAIQKLAAPRTEKLAKHGAKPRAAR 138
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 139 CMILGIPNVGKSSLINRLSGDARTKVENRPGVTRAKQWIRIGAQLELLDMPGILWPKFED 198
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
AA++LA I + YDV V L+++L
Sbjct: 199 ARAALRLAFTGAISDTVYDVGGVVLQLLRVL 229
>gi|257869679|ref|ZP_05649332.1| GTP-binding protein [Enterococcus gallinarum EG2]
gi|257803843|gb|EEV32665.1| GTP-binding protein [Enterococcus gallinarum EG2]
Length = 289
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 132/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E+ ++LK +D+V E+ DAR+P+S+ +P++DQ L + R++++N+ D+
Sbjct: 4 IQWFPGHMAKAKREVSEKLKFVDIVFELVDARLPISSRNPMLDQILQQKPRLILINKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + N Q G + AK + + + +++GL PR +R
Sbjct: 64 ADPQQTKLWEGYFRKQGFLAMAINAQDSQGIKMIVPKAKEVLQEKIARDKARGLKPRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+RFG +LE LD+PGI+ + D
Sbjct: 124 AMVIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRFGTELELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
KLA+ I ++ + D+A + AR
Sbjct: 184 PEIGKKLALTGAIKDQLIHLDDIALFGLDFFAR 216
>gi|357050878|ref|ZP_09112074.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus
saccharolyticus 30_1]
gi|355380503|gb|EHG27639.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus
saccharolyticus 30_1]
Length = 289
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 132/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E+ ++LK +D+V E+ DAR+P+S+ +P++DQ L + R++++N+ D+
Sbjct: 4 IQWFPGHMAKAKREVSEKLKFVDIVFELVDARLPVSSRNPMLDQILQQKPRLILINKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + N Q G + AK + + + +++GL PR +R
Sbjct: 64 ADPQQTKLWEGYFRKQGFLAMAINAQDSQGIKMIVPKAKEVLQEKIARDKARGLKPRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+RFG +LE LD+PGI+ + D
Sbjct: 124 AMVIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRFGTELELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
KLA+ I ++ + D+A + AR
Sbjct: 184 PEIGKKLALTGAIKDQLIHLDDIALFGLDFFAR 216
>gi|313896226|ref|ZP_07829779.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. oral
taxon 137 str. F0430]
gi|312975025|gb|EFR40487.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. oral
taxon 137 str. F0430]
Length = 303
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +++ LKL+DVVIE+ DARIP+S+ +P++ + + + R++VLN+ D+
Sbjct: 12 LQWYPGHMRKAERLVQENLKLVDVVIELLDARIPMSSANPVLREIVAGKTRLIVLNKSDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YFA Q + + G GT +L + + LA+ K G PRA R
Sbjct: 72 ADPTATRAWVQYFASQDIVAVPVDAVKGSGTKELVQAIQKLAAPRTEKLAKHGAKPRAAR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 132 CMILGIPNVGKSSLINRLSGGARTKVENRPGVTRAKQWIRIGAQLELLDMPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
AA++LA I + YDV V L+++L
Sbjct: 192 ARAALRLAFTGAISDTVYDVGGVVLQLLRVL 222
>gi|334128047|ref|ZP_08501948.1| ribosome biogenesis GTP-binding protein YlqF [Centipeda periodontii
DSM 2778]
gi|333388369|gb|EGK59548.1| ribosome biogenesis GTP-binding protein YlqF [Centipeda periodontii
DSM 2778]
Length = 296
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVVIE+ DARIP+S+ +P++ + +G + R++VLN+ D+
Sbjct: 13 LQWYPGHMRKAERLVKENLKLVDVVIELLDARIPMSSANPVLREIVGGKPRVIVLNKADL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW FA QG + + G G +L + A K G RA R
Sbjct: 73 ADEAATRAWVNCFATQGITAVPVDAVKGRGVKELVQAIAKCAKQKTDKLVQHGAKARAAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 133 CMILGIPNVGKSSLINRLSGGSKTKVENRPGVTRAKQWIRIGAQLELLDMPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ AA+ LA I + YDVA V +L+ L
Sbjct: 193 RQAALHLAFTGAINDNVYDVASVVLLLLDTL 223
>gi|410460657|ref|ZP_11314331.1| GTPase YlqF [Bacillus azotoformans LMG 9581]
gi|409926711|gb|EKN63865.1| GTPase YlqF [Bacillus azotoformans LMG 9581]
Length = 285
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 129/214 (60%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++ ++LKL+DVVIE+ DARIP S+ +P++D+ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKAKRQVIEKLKLIDVVIELVDARIPYSSRNPMIDEIISGKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
+ W YF +G K + N Q + KAL + K R+KG+ RA+
Sbjct: 63 ADPKKTDEWIIYFENKGYKCLAINAQTKNDMKNIISECKALTQEKFDKMRAKGIKNTRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL + + RPGVT +W++ GK+ E LD+PGI+ +
Sbjct: 123 RALIVGIPNVGKSTLINRLANKPIAKTGDRPGVTTGQQWIKVGKEFELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
DQ +LA+ I E D DV ++ L +
Sbjct: 183 DQEVGYRLAVTGAIKENLLDFQDVVVYALKFLTK 216
>gi|357014330|ref|ZP_09079329.1| RbgA [Paenibacillus elgii B69]
Length = 294
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 135/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++++LKL+D+ IE+ DAR+PLS+ +P++D+ L N+ R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIQEKLKLIDMAIELLDARVPLSSRNPMIDEILQNKPRLVLLNKHDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +FA+QG K I + G ++ + +K L S+ + KG+ PRA+R
Sbjct: 63 ADPEVTRRWIEFFAEQGLKAIPIDSVGGNPVKEIMQRSKELLSEKIQAQLRKGMNPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R++ +PGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRMAGRKIAATGDKPGVTKGQQWIKVGTEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q+ ++LA I E V +VA ++ L
Sbjct: 183 QSVGLRLAATGAIKEEILHVEEVALFAMRYL 213
>gi|375090694|ref|ZP_09737007.1| ribosome biogenesis GTP-binding protein YlqF [Facklamia languida
CCUG 37842]
gi|374565115|gb|EHR36391.1| ribosome biogenesis GTP-binding protein YlqF [Facklamia languida
CCUG 37842]
Length = 285
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 131/214 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +E +++LKL+D+VIE+ DARIP S+ +P++ + + + ILVLN++D+
Sbjct: 4 IQWYPGHMAKARREAEEKLKLVDLVIELVDARIPESSRNPMIAEIISQKPSILVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +Y+ QG + + Q G L + + L +D K++++G+ PRA+R
Sbjct: 64 ADKQMTQAWLSYYQDQGQVALAIDAQHQKGLKPLQKACQDLMADYFAKQKARGVKPRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINR + + +PGVT+ +W++ GK+ E LD+PGI+ + D
Sbjct: 124 LMILGIPNVGKSTLINRFVGKNQAQTGNKPGVTKAQRWLKLGKEFELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
I LA+ I ++ ++ ++A + L +
Sbjct: 184 PQTGIHLALTGAIKDQLIEMQELALAFIPHLQQF 217
>gi|357057766|ref|ZP_09118624.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas infelix
ATCC 43532]
gi|355375014|gb|EHG22305.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas infelix
ATCC 43532]
Length = 300
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVV+E+ DARIP+S+ +P++ + +G++ R++VLN+ D+
Sbjct: 13 LQWYPGHMRKAERLVKENLKLVDVVVELLDARIPMSSANPVLREIVGDKPRVIVLNKADL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW YFA G + + G G +L + A K G RA R
Sbjct: 73 ADEAATRAWVKYFAAGGISAVPVDAVKGRGVKELVQAIAKCAKPKTDKLVQHGAKARAAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 133 CMILGIPNVGKSSLINRLSGGAKTKVENRPGVTRAKQWIRLGAQLELLDMPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ AA+ LA I + YDVA V +L+ L
Sbjct: 193 RQAALHLAFTGAINDNVYDVASVVLLLLDTL 223
>gi|433446047|ref|ZP_20410178.1| ribosome biogenesis GTP-binding protein YlqF [Anoxybacillus
flavithermus TNO-09.006]
gi|432000792|gb|ELK21684.1| ribosome biogenesis GTP-binding protein YlqF [Anoxybacillus
flavithermus TNO-09.006]
Length = 281
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 132/213 (61%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E+ ++LKL+D+V E+ DARIP+S+ +PL+D+ + N+ RI++LN+ DM
Sbjct: 3 IQWFPGHMAKAKREVTEKLKLIDIVFELVDARIPISSRNPLIDEIVANKPRIILLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL-LPRAV 218
W +FA Q I + Q G G ++ +AK K +KG+ PRA+
Sbjct: 63 ADPDVTKQWIDFFAAQQIDAIAIDSQSGTGVKQMVAVAKEKLRPKFEKMIAKGIKRPRAM 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL + + PGVT+ +W++ GK+LE LD+PGI+ +
Sbjct: 123 RALIVGIPNVGKSTLINRLAGKHIAKTGDTPGVTKAQQWIKVGKELELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA I + ++ DVA ++ L+
Sbjct: 183 DEEVGYKLATTGAIKDTILNLQDVAVYALRFLS 215
>gi|315658467|ref|ZP_07911339.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
lugdunensis M23590]
gi|315496796|gb|EFU85119.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
lugdunensis M23590]
Length = 295
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 131/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 4 IQWYPGHMAKAKRKVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W YF +QG + + + G + A D K ++KGL PRA+R
Sbjct: 64 TNLKEMSKWEHYFVEQGFYPVAVDAKHGKNLKGVEAAAIEATKDKFAKEQAKGLKPRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L ++ + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 124 AMIVGIPNVGKSTLINKLARKNIAQTGNKPGVTKQQQWIKVGKVLQLLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + DVA + L
Sbjct: 184 ELVGKKLSLTGAIKDSIVHLDDVAIFGLNFL 214
>gi|224476369|ref|YP_002633975.1| ribosomal biogenesis GTPase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420976|emb|CAL27790.1| putative GTPase [Staphylococcus carnosus subsp. carnosus TM300]
Length = 289
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 131/204 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ + ++D+ + N+ R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNSMIDEVIQNKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++++ + W YF +G + + + G G ++ + A + + ++KGL PRA+R
Sbjct: 63 ANLSEISKWKDYFRSKGYYPVAVDAKHGKGLKQVEQAAIEATKEKFERDKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L + + PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANKAIAKTGNTPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KL++ I + + DVA
Sbjct: 183 QTVGKKLSLTGAIKDSIVHLDDVA 206
>gi|312898596|ref|ZP_07757986.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera
micronuciformis F0359]
gi|310620515|gb|EFQ04085.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera
micronuciformis F0359]
Length = 318
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 130/212 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK + ++ LK++DV IE+ DARIP+S+T+P++ Q LG + I+V+N+ D+
Sbjct: 32 INWYPGHMAKARRLIEGNLKIIDVAIELVDARIPMSSTNPMIGQLLGQKPSIVVMNKADL 91
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ +QG V+ N + G G +L + + LA VK R+KGL R+VR
Sbjct: 92 ADTEILKLWTAYYKEQGRMVMALNSKDGKGIKQLVQAVRKLAEPKLVKWRAKGLKSRSVR 151
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINRL R A +PG T+ +WV +L+ LD+PG++ ++ +
Sbjct: 152 TIILGIPNVGKSTLINRLAGRNATKTADKPGETKGKQWVHLADNLDLLDTPGVLWPKLEE 211
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q A +LA I + YD+ +V A L+ L+
Sbjct: 212 QKCARRLAATGAISDTVYDMEEVVADLITTLS 243
>gi|334135573|ref|ZP_08509057.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
HGF7]
gi|333606909|gb|EGL18239.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
HGF7]
Length = 290
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 130/205 (63%), Gaps = 2/205 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++D+LKL+DV IE+ DARIP+S+ +P++D L + R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIEDKLKLIDVAIELLDARIPMSSRNPMVDDILKGKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMK-LSRLAKALASDVNVKRRSKGLLPRAV 218
A W YF QG K + + G G + L R + +++ + + R KG+ PRA+
Sbjct: 63 ADPAITAEWVKYFTDQGLKALPIDASSGTGVKEILPRCKELMSAKIETQLR-KGINPRAI 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R IVG PNVGKS+LIN+L R++ +PGVT+ +W++FG D++ LD+PGI+ +
Sbjct: 122 RGLIVGIPNVGKSTLINQLAGRKIANTGDKPGVTKGQQWIKFGTDMDLLDTPGILWPKFD 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVA 303
DQ +KLA I E + D+A
Sbjct: 182 DQNVGMKLAATGAIKEEILHLDDIA 206
>gi|121533788|ref|ZP_01665615.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
gi|121307779|gb|EAX48694.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
Nor1]
Length = 287
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AK K +++ LKL+DVVIE+ DARIPLS+ +P++ + +GN+ R++ LN+ D+
Sbjct: 3 IHWFPGHMAKAYKMIREHLKLVDVVIELLDARIPLSSANPVIHELVGNKPRVIALNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + +QG + G G L + +KG+ R VR
Sbjct: 63 AEPQWTERWIAEYRRQGLAAVPLEAVSGKGVKTLIVQVETAVRPKLKALEAKGIQGRTVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKSSLINRLL + RPGVTR +W++ GK+LE LD+PG++ + D
Sbjct: 123 AIILGIPNVGKSSLINRLLGAAVVRTGDRPGVTRGQQWIKIGKNLELLDTPGVLWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A KLAI I E YDV VA L+ ML
Sbjct: 183 QEVAFKLAITGAIHEDVYDVEAVATKLLHML 213
>gi|397601583|gb|EJK57948.1| hypothetical protein THAOC_21972 [Thalassiosira oceanica]
Length = 446
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 132/267 (49%), Gaps = 60/267 (22%)
Query: 87 DADLYYWTKSLRP-VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWL 145
D + + + RP V WYPGHIAK E++L + LK +DVVIEVRD+R P +T HP + +W
Sbjct: 3 DPNSFSLSGYQRPKVNWYPGHIAKAERQLAETLKSVDVVIEVRDSRAPKATAHPSVGKWA 62
Query: 146 GNRKRILVLNREDMISMADRNAWATYFAKQGT---------------------------- 177
R R++VL R D ++ R W + + G
Sbjct: 63 AGRPRVVVLTRVDTVTTRSRETWRQAYERLGADRWQEKLAGDERNRNAQFETERRKYVDG 122
Query: 178 ---------------KVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGI 222
+V+F + + G GT ++R VN +R+ +GL R++R GI
Sbjct: 123 EDGDSVKLRGADGVEEVLFVDAKRGQGTHAITRAVYRAGRHVNERRKRRGLNDRSLRVGI 182
Query: 223 VGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKD----------------LEF 266
+G+PNVGKS+LINRLL R+ A PG+TR L+W+R D E
Sbjct: 183 IGFPNVGKSALINRLLGRKRAKTANTPGITRSLQWMRVAADKSTSASGSGSANAKKGFEL 242
Query: 267 LDSPGIIPMRISDQAAAIKLAICDDIG 293
LDSPGIIP + DQ A+ LA C+ +G
Sbjct: 243 LDSPGIIPSDMLDQNDALLLAACNSVG 269
>gi|310658878|ref|YP_003936599.1| ribosomal biogenesis GTPase [[Clostridium] sticklandii]
gi|308825656|emb|CBH21694.1| ribosomal biogenesis GTPase [[Clostridium] sticklandii]
Length = 328
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 130/214 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++++ + +KL+DVV+E+ DAR P ST++P +D + N +++VLN+ED+
Sbjct: 46 INWYPGHMKKTKEQILENIKLVDVVLEIVDARAPYSTSNPDIDDMVKNLPKVVVLNKEDL 105
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ +G + N G G +L + D+ K SKG RA+R
Sbjct: 106 ADSNKTQQWIEYYKTKGHESAMINSLTGKGLNELLASLNNKSKDLYKKLESKGRRKRALR 165
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS+INR++ ++ RPGVT+ +WV+ DLE LD+PG++ +I D
Sbjct: 166 VMVVGIPNVGKSSIINRIVGKKSAQTGDRPGVTKGKQWVKLKGDLELLDTPGVLWPKIED 225
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q+ A+KLA I ++ ++ ++A L++ L I
Sbjct: 226 QSVAMKLAFLGSIKDQVMEIEEIAMELIKYLKEI 259
>gi|210615858|ref|ZP_03290820.1| hypothetical protein CLONEX_03039 [Clostridium nexile DSM 1787]
gi|210150061|gb|EEA81070.1| hypothetical protein CLONEX_03039 [Clostridium nexile DSM 1787]
Length = 283
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 130/212 (61%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DAR+P+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARVPISSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF K+G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EDKQNDAWAEYFKKKGFAVVKVNSKKGGGIKSIQGVIQEACKEKMERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSLAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
++LA I + + ++AA L+Q + +
Sbjct: 184 TVGLRLAFIGSIKDEILNTEELAAELIQFMKK 215
>gi|134299894|ref|YP_001113390.1| HSR1-like GTP-binding protein [Desulfotomaculum reducens MI-1]
gi|134052594|gb|ABO50565.1| Ras superfamily GTP-binding protein YlqF [Desulfotomaculum reducens
MI-1]
Length = 284
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 131/212 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++D LKL+DV E+ DARIP+S+++P++DQ LG + R+++LN+ D+
Sbjct: 5 IQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W + K I + G G ++ R+A L ++ K +KG PRA+R
Sbjct: 65 ADPSITKQWQRALDRPYIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRPRAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKS+ INRL+ R+ PGVT+ +W+R LE LD+PGI+ + D
Sbjct: 125 CMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQQWIRTQGSLELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
KLA+ I E+ +D+ +V+ L+Q LA
Sbjct: 185 PEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLA 216
>gi|332653030|ref|ZP_08418775.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcaceae
bacterium D16]
gi|332518176|gb|EGJ47779.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcaceae
bacterium D16]
Length = 292
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 128/212 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ KT ++++ LK +D+V+E+ DARIP+S+ +P +D + R+++LNR D
Sbjct: 3 IQWYPGHMTKTRRQIEADLKNVDIVVEIIDARIPISSRNPDIDAICAGKPRLVILNRADQ 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW +F K+G V+ ++ + G G + S + + + D + + +GL+ R VR
Sbjct: 63 ADPAQNKAWGEWFRKRGCSVLETDAKTGKGVGQFSAVVQNVLKDQIARWQERGLVGRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN++ KR+ A RPGVTR +WV + LE LD+PGI+ + D
Sbjct: 123 AMIVGVPNVGKSTFINKVAKRKTAKAGDRPGVTRGKQWVTVDRGLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ ++LA + + DV + L+ LA
Sbjct: 183 EEIGLRLAFTGAVKDEIMDVETLGCHLMTFLA 214
>gi|379795610|ref|YP_005325608.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872600|emb|CCE58939.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 294
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + +SKGL PRA+R
Sbjct: 63 SNLKEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAMKATAEKFEREKSKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|28971414|emb|CAD70603.1| hypothetical protein [Bacillus megaterium]
Length = 361
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 132/212 (62%), Gaps = 1/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D+V E+ DARIP S+ +P++D+ + N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVDK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W Y+ +QG + + Q G G ++ +K L + + R+KG+ PRA+
Sbjct: 63 ADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL +++ RPGVT+ +W++ G +LE LD+PGI+ +
Sbjct: 123 RAMIVGIPNVGKSTLINRLASKKIAKTGDRPGVTQAQQWIKVGNELELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D+ KLA I + ++ DVA ++ L
Sbjct: 183 DETVGYKLATTGAIKDTILNMQDVAVYALRFL 214
>gi|255655269|ref|ZP_05400678.1| putative GTPase [Clostridium difficile QCD-23m63]
gi|296451254|ref|ZP_06892994.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
NAP08]
gi|296880394|ref|ZP_06904357.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
NAP07]
gi|296259860|gb|EFH06715.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
NAP08]
gi|296428635|gb|EFH14519.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
NAP07]
Length = 298
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 127/214 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K+ LKL+DVVIE+ DARIP S+ +P +D+ +G++ R++VLN+ DM
Sbjct: 16 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ K K I + G+G K+ K + + + KG RA+R
Sbjct: 76 ADKDKLNQWIEYYKKINIKAIPVDTIKGVGINKIIEECKNVTREKMSSLKDKGRKERAIR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ +PGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 195
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D +A L++ L +I
Sbjct: 196 QEVALNLAFSRAIKDEILDTETLALKLIEKLMKI 229
>gi|242373536|ref|ZP_04819110.1| possible GTP-binding protein [Staphylococcus epidermidis M23864:W1]
gi|242348899|gb|EES40501.1| possible GTP-binding protein [Staphylococcus epidermidis M23864:W1]
Length = 309
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 127/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 18 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKKDM 77
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +YF QG + + + G + A + + + KGL PRA+R
Sbjct: 78 TNLKELEKWESYFKDQGFYPVAVDAKHGKNLKNVEAEAIKATKEKFDREKEKGLKPRAIR 137
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 138 AMIVGIPNVGKSTLINKLANRSIAQTGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 197
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 198 EKVGKKLSLTGAIKDSIVHLDEVA 221
>gi|402818516|ref|ZP_10868099.1| ribosome biogenesis GTPase A [Paenibacillus alvei DSM 29]
gi|402503982|gb|EJW14514.1| ribosome biogenesis GTPase A [Paenibacillus alvei DSM 29]
Length = 292
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 131/212 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++++LKL+DV IE+ DAR+P+S+ +P+++ LGN+ R++++N+ D+
Sbjct: 3 IQWFPGHMTRARRQIQEKLKLIDVAIELLDARLPMSSRNPMINDILGNKPRLIIMNKCDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G VI + G ++ A+ L + K+ +KG+ PR VR
Sbjct: 63 ADPDVTAKWMKYFRNEGHAVIAVDASTGSNVSQIPGEARKLLEEKFQKQIAKGMKPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + RPGVT+ +W+R G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAGRTVAATGDRPGVTKGQQWIRVGSEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +LA I E +V D+A ++ +A
Sbjct: 183 QEVGYRLATTGAIREEILNVEDIAFYALKYVA 214
>gi|386319473|ref|YP_006015636.1| GTP-binding protein [Staphylococcus pseudintermedius ED99]
gi|323464644|gb|ADX76797.1| GTP-binding protein, putative [Staphylococcus pseudintermedius
ED99]
Length = 290
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 130/211 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++ N++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPFSSRNPMIDEVIQQKPRVVIFNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F ++G + + + G G + A + + + KGL PRA+R
Sbjct: 63 TNLKEMEKWYAFFREKGAYPVAVDAKHGKGLKNVEEAAIEATREKFEREKVKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANRSIAQTGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KL++ I + + +VA ++ L
Sbjct: 183 QLIGKKLSLTGAIKDSIVHLDEVAIYGLEFL 213
>gi|292670871|ref|ZP_06604297.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas noxia
ATCC 43541]
gi|292647492|gb|EFF65464.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas noxia
ATCC 43541]
Length = 299
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVV+E+ DARIP+S+ +P++ + + + R++VLN+ D+
Sbjct: 12 LQWYPGHMRKAERLVKENLKLVDVVVELLDARIPMSSANPVLREIVNGKPRLIVLNKADL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YFA +G + + G G +L + A K G RA R
Sbjct: 72 ADETATRAWVKYFAAEGLTAVPVDAVKGRGVKELVQAIAKCAKPKTDKLVHHGAKARAAR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 132 CMILGIPNVGKSSLINRLSGGSKTKVENRPGVTRAKQWIRLGAQLELLDMPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+ LA I + YDVA V +L+ L
Sbjct: 192 QHAALHLAFTGAINDNVYDVASVVLLLLDTL 222
>gi|384045195|ref|YP_005493212.1| GTPase family protein [Bacillus megaterium WSH-002]
gi|345442886|gb|AEN87903.1| GTPase family protein [Bacillus megaterium WSH-002]
Length = 288
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 133/213 (62%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D+V E+ DARIP S+ +P++D+ + N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVDK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W Y+ +QG + + Q G G ++ +K L + + R+KG+ PRA+
Sbjct: 63 ADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL +++ RPGVT+ +W++ G +LE LD+PGI+ +
Sbjct: 123 RAMIVGIPNVGKSTLINRLASKKIAKTGDRPGVTQAQQWIKVGNELELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA I + ++ DVA ++ L+
Sbjct: 183 DETVGYKLATTGAIKDTILNMQDVAVYALRFLS 215
>gi|323702666|ref|ZP_08114327.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
nigrificans DSM 574]
gi|333923310|ref|YP_004496890.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323532329|gb|EGB22207.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
nigrificans DSM 574]
gi|333748871|gb|AEF93978.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 282
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 128/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++D LKL+D IE+ DARIP+S+ +P++DQ +GN+ R+++LN+ D+
Sbjct: 5 IQWFPGHMAKAKRQVQDALKLVDAAIELLDARIPVSSRNPMIDQIVGNKPRLVILNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + KVI + G G ++ R+A L +D K +KG PRA R
Sbjct: 65 ADPNLTKQWQKQLERPNVKVIAIDTIKGEGIKEVPRMASLLVADQMAKLAAKGRRPRATR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKSS INRL+ R+ PGVT+ +W++ LE LD+PGI+ + D
Sbjct: 125 CMVLGIPNVGKSSFINRLVGRKATKTGNLPGVTKGQQWIKVAGSLELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I E+ ++ +VA L+Q L
Sbjct: 185 PEVGFKLAVTGAIKEQVFNFYEVALKLLQWL 215
>gi|418325821|ref|ZP_12937024.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU071]
gi|365227567|gb|EHM68760.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU071]
Length = 287
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|323691867|ref|ZP_08106121.1| ribosomal biogenesis GTPase [Clostridium symbiosum WAL-14673]
gi|323504074|gb|EGB19882.1| ribosomal biogenesis GTPase [Clostridium symbiosum WAL-14673]
Length = 284
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PL + +P +D+ N+ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARVPLGSRNPDIDELAKNKGRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F ++G VI N + GMG ++ L + + + R +G+L R VR
Sbjct: 63 ADEKYNEKWTAWFQEKGFHVIKVNARSGMGLKQIQPLVQEACREKIERDRKRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ R D
Sbjct: 123 TMVVGIPNVGKSTFINSFAGKACTKTGNKPGVTKGNQWIRLNKTLELLDTPGILWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLA I + D ++AA L++ L +
Sbjct: 183 QEVGLKLAFIGSINDEIIDKEELAAELLKFLIK 215
>gi|416124355|ref|ZP_11595351.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
gi|418328014|ref|ZP_12939144.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis 14.1.R1.SE]
gi|319401465|gb|EFV89675.1| conserved hypothetical protein [Staphylococcus epidermidis FRI909]
gi|365232401|gb|EHM73399.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis 14.1.R1.SE]
Length = 287
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|242242527|ref|ZP_04796972.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|420174987|ref|ZP_14681433.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM061]
gi|420191708|ref|ZP_14697619.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM023]
gi|242233954|gb|EES36266.1| GTP-binding protein [Staphylococcus epidermidis W23144]
gi|394244520|gb|EJD89862.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM061]
gi|394265859|gb|EJE10506.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM023]
Length = 287
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|295706299|ref|YP_003599374.1| ribosome biogenesis GTPase A [Bacillus megaterium DSM 319]
gi|338819264|sp|D5DJL5.1|RBGA_BACMD RecName: Full=Ribosome biogenesis GTPase A
gi|294803958|gb|ADF41024.1| ribosome biogenesis GTPase A [Bacillus megaterium DSM 319]
Length = 288
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 132/212 (62%), Gaps = 1/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D+V E+ DARIP S+ +P++D+ + N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVDK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W Y+ +QG + + Q G G ++ +K L + + R+KG+ PRA+
Sbjct: 63 ADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL +++ RPGVT+ +W++ G +LE LD+PGI+ +
Sbjct: 123 RAMIVGIPNVGKSTLINRLASKKIAKTGDRPGVTQAQQWIKVGNELELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D+ KLA I + ++ DVA ++ L
Sbjct: 183 DETVGYKLATTGAIKDTILNMQDVAVYALRFL 214
>gi|255100275|ref|ZP_05329252.1| putative GTPase [Clostridium difficile QCD-63q42]
gi|255306215|ref|ZP_05350387.1| putative GTPase [Clostridium difficile ATCC 43255]
gi|423090845|ref|ZP_17079131.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
70-100-2010]
gi|357555960|gb|EHJ37582.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
70-100-2010]
Length = 298
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 127/214 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K+ LKL+DVVIE+ DARIP S+ +P +D+ +G++ R++VLN+ DM
Sbjct: 16 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ K K I + G+G K+ K + + + KG RA+R
Sbjct: 76 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINKIIEECKNVTREKMSSLKDKGRKERAIR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ +PGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 195
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D +A L++ L +I
Sbjct: 196 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKI 229
>gi|294500953|ref|YP_003564653.1| ribosome biogenesis GTPase A [Bacillus megaterium QM B1551]
gi|294350890|gb|ADE71219.1| ribosome biogenesis GTPase A [Bacillus megaterium QM B1551]
Length = 288
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 133/213 (62%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+D+V E+ DARIP S+ +P++D+ + N+ RI++LN+ D
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKVDK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
W Y+ +QG + + Q G G ++ +K L + + R+KG+ PRA+
Sbjct: 63 ADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL +++ RPGVT+ +W++ G +LE LD+PGI+ +
Sbjct: 123 RAMIVGIPNVGKSTLINRLASKKIAKTGDRPGVTQAQQWIKVGNELELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D+ KLA I + ++ DVA ++ L+
Sbjct: 183 DEKVGYKLATTGAIKDTILNMQDVAVYALRFLS 215
>gi|57866703|ref|YP_188393.1| ribosomal biogenesis GTPase [Staphylococcus epidermidis RP62A]
gi|417647399|ref|ZP_12297239.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU144]
gi|418411664|ref|ZP_12984930.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis BVS058A4]
gi|418612108|ref|ZP_13175154.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU117]
gi|418626838|ref|ZP_13189434.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU126]
gi|420163419|ref|ZP_14670166.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM095]
gi|420167601|ref|ZP_14674253.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM087]
gi|420185451|ref|ZP_14691543.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM040]
gi|420211865|ref|ZP_14717221.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM001]
gi|420234404|ref|ZP_14738967.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH051475]
gi|57637361|gb|AAW54149.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
gi|329724320|gb|EGG60832.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU144]
gi|374819990|gb|EHR84104.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU117]
gi|374831382|gb|EHR95124.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU126]
gi|394235108|gb|EJD80682.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM095]
gi|394237629|gb|EJD83115.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM087]
gi|394254437|gb|EJD99406.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM040]
gi|394280375|gb|EJE24656.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM001]
gi|394304207|gb|EJE47614.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH051475]
gi|410891247|gb|EKS39044.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis BVS058A4]
Length = 287
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|423082353|ref|ZP_17070945.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
002-P50-2011]
gi|423087745|ref|ZP_17076131.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
050-P50-2011]
gi|357544059|gb|EHJ26065.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
050-P50-2011]
gi|357548679|gb|EHJ30539.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium difficile
002-P50-2011]
Length = 298
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 127/214 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K+ LKL+DVVIE+ DARIP S+ +P +D+ +G++ R++VLN+ DM
Sbjct: 16 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ K K I + G+G K+ K + + + KG RA+R
Sbjct: 76 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINKIIEECKNVTREKMSSLKDKGRKERAIR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ +PGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 195
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D +A L++ L +I
Sbjct: 196 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKI 229
>gi|319892259|ref|YP_004149134.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus
pseudintermedius HKU10-03]
gi|317161955|gb|ADV05498.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus
pseudintermedius HKU10-03]
Length = 290
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 130/211 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++ N++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPFSSRNPMIDEVIQQKPRVVIFNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F ++G + + + G G + A + + + KGL PRA+R
Sbjct: 63 TNLKEMEKWYAFFREKGAYPVAVDAKHGKGLKNVEAAAIEATREKFEREKVKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANRSIAQTGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KL++ I + + +VA ++ L
Sbjct: 183 QLIGKKLSLTGAIKDSIVHLDEVAIYGLEFL 213
>gi|392989833|ref|YP_006488426.1| GTPase [Enterococcus hirae ATCC 9790]
gi|392337253|gb|AFM71535.1| GTPase [Enterococcus hirae ATCC 9790]
Length = 286
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF +QG + + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQTYFQQQGHQALAITAQESKGIKALIPEAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGSELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|418615525|ref|ZP_13178467.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU118]
gi|374816964|gb|EHR81155.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU118]
Length = 287
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EKVGKKLSLTGAIKDSIVHLDEVA 206
>gi|407474073|ref|YP_006788473.1| ribosome biogenesis GTPase A [Clostridium acidurici 9a]
gi|407050581|gb|AFS78626.1| ribosome biogenesis GTPase A [Clostridium acidurici 9a]
Length = 281
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 127/216 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ L+ LKL+D+VIE+ DARIP+S+ +P++D+ + N+ R++++N+ D+
Sbjct: 3 INWYPGHMKKTKELLQANLKLVDIVIELLDARIPISSKNPMIDEIISNKPRLVIMNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
S W YF + V+F G K++ + + D KR+ KG+ +VR
Sbjct: 63 SSEKGNKLWKEYFESKNIPVVFITATNNNGIDKVTNEVQKVLKDKMQKRKEKGIKSTSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN L R+ RPG+T +W++ D+E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINSLAGRKGAKTGNRPGITTSKQWIKLKGDIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
+ A+ LA I + D +A LV+ L I T
Sbjct: 183 KRVALNLAFTGAIKDEILDTETLALKLVEKLCAIDT 218
>gi|323484794|ref|ZP_08090151.1| hypothetical protein HMPREF9474_01902 [Clostridium symbiosum
WAL-14163]
gi|355627810|ref|ZP_09049441.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
7_3_54FAA]
gi|323401900|gb|EGA94241.1| hypothetical protein HMPREF9474_01902 [Clostridium symbiosum
WAL-14163]
gi|354820135|gb|EHF04561.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
7_3_54FAA]
Length = 284
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 126/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PL + +P +D+ N+ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARVPLGSRNPDIDELAKNKGRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F ++G VI N + GMG ++ L + + + R +G+L R VR
Sbjct: 63 ADERYNEKWTAWFQEKGFHVIKVNARSGMGLKQIQPLVQEACREKIERDRKRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ R D
Sbjct: 123 TMVVGIPNVGKSTFINSFAGKACTKTGNKPGVTKGNQWIRLNKTLELLDTPGILWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLA I + D ++AA L++ L +
Sbjct: 183 QEVGLKLAFIGSINDEIIDKEELAAELLKFLIK 215
>gi|126698855|ref|YP_001087752.1| GTPase, MG442 type [Clostridium difficile 630]
gi|115250292|emb|CAJ68114.1| putative GTPase, MG442 type [Clostridium difficile 630]
Length = 289
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 127/214 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K+ LKL+DVVIE+ DARIP S+ +P +D+ +G++ R++VLN+ DM
Sbjct: 7 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ K K I + G+G K+ K + + + KG RA+R
Sbjct: 67 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINKIIEECKNVTREKMSSLKDKGRKERAIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ +PGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 127 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D +A L++ L +I
Sbjct: 187 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKI 220
>gi|347750516|ref|YP_004858081.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus coagulans
36D1]
gi|347583034|gb|AEO99300.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus coagulans
36D1]
Length = 279
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIP+S+ +P++D+ + + RI +LN+ DM
Sbjct: 4 IQWFPGHMAKARREVTEKLKLVDIVFELLDARIPVSSANPMLDELIQQKPRIKLLNKADM 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W + T V+ + Q G G K+ +LA+ + + R+KG+ PRA+R
Sbjct: 64 ADPAATARWLEKLSGGNTHVLAIDAQSGKGLDKMVKLAEQILEPKWERMRAKGIRPRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL + + PGVT+ W++ GK +E LD+PGI+ + D
Sbjct: 124 AMIVGIPNVGKSTLINRLAGKNIAKTGNTPGVTKAQAWIKVGKTMELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I + ++ DV+ ++ L +
Sbjct: 184 KETGYKLALTGAIKDTILNLQDVSVFGLRFLEK 216
>gi|417643565|ref|ZP_12293607.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
warneri VCU121]
gi|445059836|ref|YP_007385240.1| GTPase YlqF [Staphylococcus warneri SG1]
gi|330685672|gb|EGG97313.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU121]
gi|443425893|gb|AGC90796.1| GTPase YlqF [Staphylococcus warneri SG1]
Length = 291
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 131/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W YF ++G + + + G + + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWEQYFEEKGYYPVAVDAKHGKNLKDVEKAAIQATKEKFDREKAKGLRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANRSIAQTGNKPGVTKQQQWIKVGTSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + +VA +Q +
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVAIYGLQFM 213
>gi|392971848|ref|ZP_10337240.1| possible GTP-binding protein [Staphylococcus equorum subsp. equorum
Mu2]
gi|403046828|ref|ZP_10902297.1| ribosomal biogenesis GTPase [Staphylococcus sp. OJ82]
gi|392509561|emb|CCI60530.1| possible GTP-binding protein [Staphylococcus equorum subsp. equorum
Mu2]
gi|402763524|gb|EJX17617.1| ribosomal biogenesis GTPase [Staphylococcus sp. OJ82]
Length = 286
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ ++LK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEELKKVDVVFELVDARIPYSSRNPMIDEVIQQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W YF +G + + + G G + + A ++ K + KGL PRA+R
Sbjct: 63 ANLKELVKWENYFKGKGFYPVAIDAKHGKGLKLVEQAAIKATTEKFEKEKQKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L + + PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANKSVTKTGNTPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KL+I I + + +VA
Sbjct: 183 QLVGKKLSITGAIKDSIVHLDEVA 206
>gi|126654071|ref|ZP_01725897.1| ribosomal biogenesis GTPase [Bacillus sp. B14905]
gi|126589451|gb|EAZ83598.1| ribosomal biogenesis GTPase [Bacillus sp. B14905]
Length = 281
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 132/205 (64%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+AK +E+ ++LKL+D++ E+ DAR+PLS+ +P++D+ + + R+L+LN+ DM +
Sbjct: 1 MAKARREVTEKLKLVDIIFELIDARLPLSSRNPMIDEVINQKPRLLILNKADMADEQETR 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
W YFA++G K + N G G ++++ A+ + + + ++KG+ PRA+RA IVG P
Sbjct: 61 KWVDYFAQRGHKAVAINSLEGKGLQQVTKAAQEILKEKFDRMKAKGMKPRAIRAMIVGIP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+LINRL K+ + PGVT+ +W++ GK+LE LD+PGI+ + DQ KL
Sbjct: 121 NVGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFEDQEVGFKL 180
Query: 287 AICDDIGERSYDVADVAAILVQMLA 311
A+ I + ++ D+A ++ L+
Sbjct: 181 ALTGAIKDTITNMEDLAVYGLRFLS 205
>gi|424780492|ref|ZP_18207365.1| 50S ribosomal subunit maturation GTPase RbgA [Catellicoccus
marimammalium M35/04/3]
gi|422842894|gb|EKU27341.1| 50S ribosomal subunit maturation GTPase RbgA [Catellicoccus
marimammalium M35/04/3]
Length = 285
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 132/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+VIEV DAR+P S+ +P++D+ + + R+++LN+ D+
Sbjct: 4 IQWFPGHMAKARREVIEKLKLVDIVIEVVDARLPKSSQNPMLDKIIQQKPRLVLLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F QG + N Q G G +++ + + +D +RR KG+ +A+R
Sbjct: 64 ADPEETKKWQAHFEAQGMACLAINAQEGKGIKQITPTCEKVLADKIQRRREKGMKDKAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+++NRL+++ + +PGVT+ +W++ K LE LD+PGI+ + +
Sbjct: 124 AMIIGIPNVGKSTVLNRLIRKNVAKTGNKPGVTKAQQWLKIDKKLELLDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I + D+A ++ R
Sbjct: 184 EETGYKLALTGAIKDDLLHFDDIALFGLEFFDR 216
>gi|422343784|ref|ZP_16424711.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas noxia
F0398]
gi|355378200|gb|EHG25391.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas noxia
F0398]
Length = 310
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+DVV+E+ DARIP+S+ +P++ + + + R++VLN+ D+
Sbjct: 23 LQWYPGHMRKAERLVKENLKLVDVVVELLDARIPMSSANPVLREIVNGKPRLIVLNKADL 82
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YFA +G + + G G +L + A K G RA R
Sbjct: 83 ADETATRAWVKYFAAEGLTAVPVDAVKGRGVKELVQAIAKCAKPKTDKLVHHGAKARAAR 142
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPG+TR +W+R G LE LD PGI+ + D
Sbjct: 143 CMILGIPNVGKSSLINRLSGGSKTKVENRPGITRAKQWIRLGAQLELLDMPGILWPKFED 202
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA+ LA I + YDVA V +L+ L
Sbjct: 203 QNAALHLAFTGAINDNVYDVASVVLLLLDTL 233
>gi|418646168|ref|ZP_13208283.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-55]
gi|375021634|gb|EHS15130.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-55]
Length = 294
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNTLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|259046714|ref|ZP_05737115.1| ribosome biogenesis GTP-binding protein YlqF [Granulicatella
adiacens ATCC 49175]
gi|259036610|gb|EEW37865.1| ribosome biogenesis GTP-binding protein YlqF [Granulicatella
adiacens ATCC 49175]
Length = 286
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 125/204 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E ++LKL+DVVIE+ DARIP S+ +P++++ G +K++++LN+ D+
Sbjct: 4 IQWFPGHMAKARREATEKLKLVDVVIEMVDARIPESSRNPIIEEIKGQKKQLILLNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG KV+ + + G G ++ K L + V K KG+ PR +R
Sbjct: 64 ADPSQTKRWNDYFTSQGIKVLTTEAKDGKGIKQVKAAIKELMAPVFEKNLEKGIRPRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKS+ INR++ + A RPGVT+ +W++ G D E LD+PGI+ +
Sbjct: 124 LMVLGIPNVGKSTFINRMINKNQAETANRPGVTKGQRWLKIGNDFELLDTPGILWPKFES 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KLA+ I + + D+A
Sbjct: 184 EEVGNKLALTGAIKDALLHMDDIA 207
>gi|70726671|ref|YP_253585.1| ribosomal biogenesis GTPase [Staphylococcus haemolyticus JCSC1435]
gi|68447395|dbj|BAE04979.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 294
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 133/211 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W ++F +G + + + G + A A + + ++KGL PRA+R
Sbjct: 63 SNLNEMQKWESFFIDKGYYPVSVDAKHGKNLKGVETAAIAATKEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L ++ + +PGVT+ +W++ G+ L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLARKNIAQTGNKPGVTKQQQWIKVGQSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + +VA +Q L
Sbjct: 183 EIVGKKLSLTGAIKDSIVHLDEVAIYGLQFL 213
>gi|164688557|ref|ZP_02212585.1| hypothetical protein CLOBAR_02202 [Clostridium bartlettii DSM
16795]
gi|164602970|gb|EDQ96435.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
bartlettii DSM 16795]
Length = 299
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 127/214 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +++ LKL+DVVIE+ DARIPLS+ +P +D+ N+ R++VLN+ D+
Sbjct: 16 INWYPGHMKKTKEMVQNNLKLVDVVIELLDARIPLSSKNPEIDKLAHNKPRVVVLNKSDL 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A N W +Y+ +G K I + G G K+ K + + + KG RA+R
Sbjct: 76 SDRAKLNKWISYYQSKGIKAIPVDTLKGSGVNKIVEECKNVTKEKMDALKEKGRKERAIR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ RPGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 136 VMIVGVPNVGKSSLINKLTGRKSTQTGDRPGVTKGKQWVRLKGNLELLDTPGILWPKFED 195
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D+ + ++ ++ I
Sbjct: 196 QKIALNLAFTRAIKDEILDIDTLGLKFIEKMSDI 229
>gi|295396863|ref|ZP_06806991.1| ribosome biogenesis GTP-binding protein YlqF [Aerococcus viridans
ATCC 11563]
gi|294974889|gb|EFG50588.1| ribosome biogenesis GTP-binding protein YlqF [Aerococcus viridans
ATCC 11563]
Length = 291
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +KE++ QL +D+V+E+RDARIP ++ +P++D+ + N++ ++VLN++D+
Sbjct: 4 IQWYPGHMAKAKKEVQSQLNAVDIVLEIRDARIPTASMNPMLDEIIKNKRHMIVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLA-KALASDVNVKRRSKGLLPRAV 218
W + + I + + +G MK+ R A K D+ K R+KG+L +++
Sbjct: 64 ADPQQTKEWVKALSGENKLAIALDSK-KLGDMKIFRQALKDFTQDIQDKWRNKGILHKSI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R ++G PNVGKS+ IN+ K++ +PGVT+ +W++ KD E LD+PGI+ +
Sbjct: 123 RVMVIGIPNVGKSTFINQFTKQKKAQVGNKPGVTKGQQWIKIDKDFELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ A KLA+ I + + DVA ++
Sbjct: 183 DQEVADKLALTGGIKDTHFYKDDVALFALEFF 214
>gi|282916493|ref|ZP_06324255.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus D139]
gi|282319933|gb|EFB50281.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus D139]
Length = 294
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + +VA + L
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVAVYGLNFL 213
>gi|21282855|ref|NP_645943.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
MW2]
gi|49486082|ref|YP_043303.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208111|ref|ZP_06924542.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300912192|ref|ZP_07129635.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus TCH70]
gi|418317166|ref|ZP_12928590.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21340]
gi|418321912|ref|ZP_12933251.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VCU006]
gi|418875179|ref|ZP_13429439.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC93]
gi|418934145|ref|ZP_13487968.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC128]
gi|418988064|ref|ZP_13535737.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1835]
gi|448741760|ref|ZP_21723717.1| ribosomal biogenesis GTPase [Staphylococcus aureus KT/314250]
gi|448743315|ref|ZP_21725224.1| Ribosomal Biogenesis GTPase [Staphylococcus aureus KT/Y21]
gi|21204294|dbj|BAB94991.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244525|emb|CAG42954.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296887354|gb|EFH26256.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus ATCC 51811]
gi|300886438|gb|EFK81640.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus TCH70]
gi|365224527|gb|EHM65792.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VCU006]
gi|365239538|gb|EHM80340.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21340]
gi|377719852|gb|EHT44022.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1835]
gi|377770239|gb|EHT94001.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC93]
gi|377770888|gb|EHT94647.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC128]
gi|445547398|gb|ELY15667.1| ribosomal biogenesis GTPase [Staphylococcus aureus KT/314250]
gi|445563244|gb|ELY19406.1| Ribosomal Biogenesis GTPase [Staphylococcus aureus KT/Y21]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|82750846|ref|YP_416587.1| ribosomal biogenesis GTPase [Staphylococcus aureus RF122]
gi|82656377|emb|CAI80796.1| probable GTP-binding protein [Staphylococcus aureus RF122]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|418634023|ref|ZP_13196421.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU129]
gi|420177366|ref|ZP_14683702.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM057]
gi|420179849|ref|ZP_14686125.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM053]
gi|420189835|ref|ZP_14695794.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM037]
gi|420204167|ref|ZP_14709727.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM015]
gi|374838015|gb|EHS01572.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU129]
gi|394247750|gb|EJD92992.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM057]
gi|394252327|gb|EJD97364.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM053]
gi|394259950|gb|EJE04776.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM037]
gi|394274181|gb|EJE18606.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM015]
Length = 287
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|418630372|ref|ZP_13192854.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU128]
gi|374837913|gb|EHS01471.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU128]
Length = 287
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMILGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|260583826|ref|ZP_05851574.1| ribosome biogenesis GTP-binding protein YlqF [Granulicatella
elegans ATCC 700633]
gi|260158452|gb|EEW93520.1| ribosome biogenesis GTP-binding protein YlqF [Granulicatella
elegans ATCC 700633]
Length = 285
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 131/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E ++LKL+DVVIE+ DARIP S+ +P++++ G +K++++LN+ D+
Sbjct: 4 IQWYPGHMAKAKREAIEKLKLVDVVIELVDARIPESSRNPIVNEIKGQKKQLMLLNKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ ++G +V+ + G G ++ KAL ++ K +KG+ PR +R
Sbjct: 64 ADPIQTKKWMKYYQEEGIEVLTVEAKDGKGLNQVKAAIKALMAEEFEKLAAKGVRPRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKS+ INR++++ A RPGVT+ +W++ G D E LD+PGI+ + +
Sbjct: 124 LMVLGIPNVGKSTFINRMIQKNQAETANRPGVTKGQRWLKIGNDFELLDTPGILWPKFDN 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA+ I + + DVA + +
Sbjct: 184 QEIGNKLAVTGAIKDSLLHMDDVALFAINIF 214
>gi|253733519|ref|ZP_04867684.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|417898523|ref|ZP_12542443.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21259]
gi|253728573|gb|EES97302.1| GTP-binding protein [Staphylococcus aureus subsp. aureus TCH130]
gi|341848556|gb|EGS89719.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21259]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|418568992|ref|ZP_13133332.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21272]
gi|371978177|gb|EHO95427.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21272]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGENLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|57651812|ref|YP_186118.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
COL]
gi|87162211|ref|YP_493833.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194951|ref|YP_499751.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|151221365|ref|YP_001332187.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161509409|ref|YP_001575068.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221142033|ref|ZP_03566526.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|258452542|ref|ZP_05700548.1| ribosomal biogenesis GTPase [Staphylococcus aureus A5948]
gi|262048141|ref|ZP_06021028.1| hypothetical protein SAD30_1917 [Staphylococcus aureus D30]
gi|262051870|ref|ZP_06024086.1| hypothetical protein SA930_1420 [Staphylococcus aureus 930918-3]
gi|269202859|ref|YP_003282128.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
ED98]
gi|282920027|ref|ZP_06327756.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9765]
gi|284024236|ref|ZP_06378634.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
132]
gi|294848238|ref|ZP_06788985.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9754]
gi|296274800|ref|ZP_06857307.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
MR1]
gi|304381193|ref|ZP_07363846.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|379014434|ref|YP_005290670.1| GTPase YlqF [Staphylococcus aureus subsp. aureus VC40]
gi|384869777|ref|YP_005752491.1| GTP-binding protein [Staphylococcus aureus subsp. aureus T0131]
gi|386728926|ref|YP_006195309.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|387142852|ref|YP_005731245.1| putative GTPase protein [Staphylococcus aureus subsp. aureus TW20]
gi|387602518|ref|YP_005734039.1| GTPase family [Staphylococcus aureus subsp. aureus ST398]
gi|404478583|ref|YP_006710013.1| GTPase protein [Staphylococcus aureus 08BA02176]
gi|415686433|ref|ZP_11450522.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
CGS01]
gi|417648959|ref|ZP_12298771.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21189]
gi|418281427|ref|ZP_12894238.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21178]
gi|418286379|ref|ZP_12899025.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21209]
gi|418309862|ref|ZP_12921413.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21331]
gi|418317684|ref|ZP_12929100.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21232]
gi|418570773|ref|ZP_13135034.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21283]
gi|418579074|ref|ZP_13143169.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1114]
gi|418649313|ref|ZP_13211341.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-91]
gi|418658317|ref|ZP_13220049.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-111]
gi|418873497|ref|ZP_13427792.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-125]
gi|418886504|ref|ZP_13440652.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1150]
gi|418903452|ref|ZP_13457493.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1770]
gi|418906178|ref|ZP_13460205.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|418911850|ref|ZP_13465833.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG547]
gi|418925476|ref|ZP_13479378.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG2018]
gi|418928500|ref|ZP_13482386.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1612]
gi|418948218|ref|ZP_13500538.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-157]
gi|418955486|ref|ZP_13507426.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-189]
gi|418980052|ref|ZP_13527840.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|419774366|ref|ZP_14300336.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CO-23]
gi|421150193|ref|ZP_15609849.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|422742360|ref|ZP_16796366.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus MRSA177]
gi|422745526|ref|ZP_16799465.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus MRSA131]
gi|424785073|ref|ZP_18211876.1| 50S ribosomal subunit maturation GTPase [Staphylococcus aureus
CN79]
gi|440706067|ref|ZP_20886816.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21282]
gi|440734689|ref|ZP_20914301.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|443639731|ref|ZP_21123732.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21196]
gi|57285998|gb|AAW38092.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
COL]
gi|87128185|gb|ABD22699.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87202509|gb|ABD30319.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150374165|dbj|BAF67425.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160368218|gb|ABX29189.1| possible GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257859760|gb|EEV82602.1| ribosomal biogenesis GTPase [Staphylococcus aureus A5948]
gi|259160271|gb|EEW45299.1| hypothetical protein SA930_1420 [Staphylococcus aureus 930918-3]
gi|259163707|gb|EEW48262.1| hypothetical protein SAD30_1917 [Staphylococcus aureus D30]
gi|262075149|gb|ACY11122.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
ED98]
gi|269940735|emb|CBI49116.1| putative GTPase protein [Staphylococcus aureus subsp. aureus TW20]
gi|282594743|gb|EFB99727.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9765]
gi|283470456|emb|CAQ49667.1| GTPase family [Staphylococcus aureus subsp. aureus ST398]
gi|294825038|gb|EFG41460.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9754]
gi|304340176|gb|EFM06117.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|315198483|gb|EFU28812.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140941|gb|EFW32788.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320144344|gb|EFW36110.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329313912|gb|AEB88325.1| Possible GTP-binding protein [Staphylococcus aureus subsp. aureus
T0131]
gi|329728952|gb|EGG65366.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21189]
gi|365165249|gb|EHM57077.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21178]
gi|365167087|gb|EHM58563.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21209]
gi|365237985|gb|EHM78824.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21331]
gi|365244952|gb|EHM85604.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21232]
gi|371982953|gb|EHP00101.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21283]
gi|374363131|gb|AEZ37236.1| GTPase YlqF [Staphylococcus aureus subsp. aureus VC40]
gi|375029686|gb|EHS23011.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-91]
gi|375038869|gb|EHS31824.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-111]
gi|375366034|gb|EHS70046.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-125]
gi|375370969|gb|EHS74761.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-189]
gi|375373165|gb|EHS76862.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-157]
gi|377697101|gb|EHT21456.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1114]
gi|377725228|gb|EHT49343.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG547]
gi|377725457|gb|EHT49570.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1150]
gi|377738412|gb|EHT62421.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1612]
gi|377742467|gb|EHT66452.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1770]
gi|377744545|gb|EHT68522.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG2018]
gi|377765478|gb|EHT89328.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC345D]
gi|379992215|gb|EIA13672.1| GTP-binding protein [Staphylococcus aureus subsp. aureus DR10]
gi|383971892|gb|EID87954.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CO-23]
gi|384230219|gb|AFH69466.1| GTP-binding protein [Staphylococcus aureus subsp. aureus 71193]
gi|394329583|gb|EJE55685.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|404440072|gb|AFR73265.1| putative GTPase protein [Staphylococcus aureus 08BA02176]
gi|421956483|gb|EKU08812.1| 50S ribosomal subunit maturation GTPase [Staphylococcus aureus
CN79]
gi|436431717|gb|ELP29070.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus DSM 20231]
gi|436507598|gb|ELP43278.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21282]
gi|443406382|gb|ELS64962.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21196]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|417896133|ref|ZP_12540100.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21235]
gi|341841034|gb|EGS82506.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21235]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|417901371|ref|ZP_12545247.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21266]
gi|418599669|ref|ZP_13163149.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21343]
gi|341845210|gb|EGS86412.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21266]
gi|374396327|gb|EHQ67568.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21343]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|253731862|ref|ZP_04866027.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253724272|gb|EES93001.1| GTP-binding protein [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|452991215|emb|CCQ97470.1| Ribosome biogenesis GTPase A [Clostridium ultunense Esp]
Length = 282
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K L L+D+V EV DARIP S+ +P +D LG + RI++LN+ D+
Sbjct: 3 INWYPGHMKKTKESIKKNLSLVDIVYEVIDARIPFSSQNPEIDGILGRKSRIIILNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
M W YF K+G + + G ++ +L+ L + KG+ R +R
Sbjct: 63 ADMESNKKWQDYFGKKGISSVIVDCINNRGLEEVIKLSYRLTGERRRHLAKKGIKNRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN L KR+ +PGVTRV +W+R DLE LD+PGI+ + D
Sbjct: 123 VMIVGVPNVGKSTLINSLSKRKGTKVGNKPGVTRVNQWIRLKGDLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ ++A LV+ L
Sbjct: 183 KEVGLNLAFTGAIKDELLDIENLAIKLVERL 213
>gi|239636277|ref|ZP_04677279.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
warneri L37603]
gi|239597632|gb|EEQ80127.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
warneri L37603]
Length = 291
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++D+
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKKDI 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F ++G + + + G + + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWEQFFEEKGYYPVAVDAKHGKNLKDVEKAAIQATKEKFEREKAKGLRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANRSVAQTGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL++ I + + +VA +Q +
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVAIYGLQFM 213
>gi|385781471|ref|YP_005757642.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 11819-97]
gi|418572280|ref|ZP_13136492.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21333]
gi|364522460|gb|AEW65210.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 11819-97]
gi|371984764|gb|EHP01873.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21333]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|282918942|ref|ZP_06326677.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus C427]
gi|282316752|gb|EFB47126.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus C427]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|49483406|ref|YP_040630.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257425297|ref|ZP_05601722.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257427957|ref|ZP_05604355.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257430590|ref|ZP_05606972.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
68-397]
gi|257433351|ref|ZP_05609709.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436193|ref|ZP_05612240.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M876]
gi|282903798|ref|ZP_06311686.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus C160]
gi|282905561|ref|ZP_06313416.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282908536|ref|ZP_06316366.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282910815|ref|ZP_06318618.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282914020|ref|ZP_06321807.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M899]
gi|282924065|ref|ZP_06331741.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus C101]
gi|283770306|ref|ZP_06343198.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
H19]
gi|283957986|ref|ZP_06375437.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293501051|ref|ZP_06666902.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 58-424]
gi|293510013|ref|ZP_06668721.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M809]
gi|293526600|ref|ZP_06671285.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M1015]
gi|295427730|ref|ZP_06820362.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297591312|ref|ZP_06949950.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus MN8]
gi|379020952|ref|YP_005297614.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus aureus
subsp. aureus M013]
gi|384547487|ref|YP_005736740.1| GTP-binding protein [Staphylococcus aureus subsp. aureus ED133]
gi|384867874|ref|YP_005748070.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus TCH60]
gi|386830778|ref|YP_006237432.1| putative GTPase protein [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387780352|ref|YP_005755150.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|415683834|ref|ZP_11449036.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
CGS00]
gi|416839290|ref|ZP_11902684.1| ribosomal biogenesis GTPase [Staphylococcus aureus O11]
gi|416847454|ref|ZP_11907176.1| ribosomal biogenesis GTPase [Staphylococcus aureus O46]
gi|417653182|ref|ZP_12302916.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21193]
gi|417797222|ref|ZP_12444420.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21305]
gi|417797958|ref|ZP_12445144.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21310]
gi|417887003|ref|ZP_12531142.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21195]
gi|417903355|ref|ZP_12547202.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21269]
gi|418283063|ref|ZP_12895820.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21202]
gi|418312742|ref|ZP_12924251.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21334]
gi|418561434|ref|ZP_13125925.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21262]
gi|418566592|ref|ZP_13130965.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21264]
gi|418582077|ref|ZP_13146155.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1605]
gi|418597655|ref|ZP_13161177.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21342]
gi|418603088|ref|ZP_13166479.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21345]
gi|418655687|ref|ZP_13217531.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-105]
gi|418891876|ref|ZP_13445991.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1176]
gi|418897780|ref|ZP_13451850.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|418900650|ref|ZP_13454707.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1214]
gi|418908954|ref|ZP_13462957.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG149]
gi|418917038|ref|ZP_13470997.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1267]
gi|418922825|ref|ZP_13476742.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1233]
gi|418950552|ref|ZP_13502716.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-160]
gi|418982156|ref|ZP_13529864.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1242]
gi|418985824|ref|ZP_13533510.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1500]
gi|49241535|emb|CAG40221.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257271754|gb|EEV03892.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257274798|gb|EEV06285.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257278718|gb|EEV09337.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
68-397]
gi|257281444|gb|EEV11581.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284475|gb|EEV14595.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M876]
gi|282314037|gb|EFB44429.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus C101]
gi|282322088|gb|EFB52412.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M899]
gi|282325420|gb|EFB55729.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282327598|gb|EFB57881.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282330853|gb|EFB60367.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282595416|gb|EFC00380.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus C160]
gi|283460453|gb|EFC07543.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
H19]
gi|283790135|gb|EFC28952.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus A017934/97]
gi|290920672|gb|EFD97735.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M1015]
gi|291096056|gb|EFE26317.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 58-424]
gi|291466957|gb|EFF09475.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus M809]
gi|295128088|gb|EFG57722.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus EMRSA16]
gi|297576198|gb|EFH94914.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus MN8]
gi|298694536|gb|ADI97758.1| probable GTP-binding protein [Staphylococcus aureus subsp. aureus
ED133]
gi|312438379|gb|ADQ77450.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus TCH60]
gi|315194132|gb|EFU24525.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
CGS00]
gi|323441021|gb|EGA98728.1| ribosomal biogenesis GTPase [Staphylococcus aureus O11]
gi|323442338|gb|EGA99968.1| ribosomal biogenesis GTPase [Staphylococcus aureus O46]
gi|329733564|gb|EGG69892.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21193]
gi|334267270|gb|EGL85734.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21305]
gi|334277080|gb|EGL95319.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21310]
gi|341849976|gb|EGS91109.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21269]
gi|341858425|gb|EGS99215.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21195]
gi|344177454|emb|CCC87922.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|359830261|gb|AEV78239.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus aureus
subsp. aureus M013]
gi|365168660|gb|EHM59998.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21202]
gi|365238387|gb|EHM79224.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21334]
gi|371969862|gb|EHO87300.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21264]
gi|371977645|gb|EHO94909.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21262]
gi|374393717|gb|EHQ65021.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21342]
gi|374393817|gb|EHQ65120.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21345]
gi|375035925|gb|EHS29019.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-105]
gi|375376724|gb|EHS80243.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-160]
gi|377703118|gb|EHT27434.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1214]
gi|377704437|gb|EHT28746.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1242]
gi|377705642|gb|EHT29946.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1500]
gi|377710487|gb|EHT34725.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1605]
gi|377731208|gb|EHT55265.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1176]
gi|377736148|gb|EHT60178.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1233]
gi|377750212|gb|EHT74150.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1267]
gi|377753992|gb|EHT77902.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG149]
gi|377760815|gb|EHT84691.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC341D]
gi|385196170|emb|CCG15791.1| putative GTPase protein [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 294
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|313885159|ref|ZP_07818911.1| ribosome biogenesis GTP-binding protein YlqF [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619850|gb|EFR31287.1| ribosome biogenesis GTP-binding protein YlqF [Eremococcus coleocola
ACS-139-V-Col8]
Length = 290
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 127/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DVVIE+ DARIP S+ +P++ + ++KRI+VLN+ D+
Sbjct: 4 IQWFPGHMAKARREVSEKLKLIDVVIELVDARIPESSRNPILQDLIQDKKRIIVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW + +QG K + + Q G L + K L + K KGL PR +R
Sbjct: 64 ADPKLSQAWVKAYLEQGFKALSIDAQHNKGLKGLEKAIKELMAPEFEKLAQKGLKPRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINR + + +PGVT+ +W++ GK E LD+PGI+ + D
Sbjct: 124 LMILGIPNVGKSTLINRFVGKNQAITGNKPGVTKAQRWLKIGKSFELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ I LA+ I ++ + D+A L+ +L
Sbjct: 184 EQVGINLALTGAIKDQLLHMDDLALTLLAIL 214
>gi|258423916|ref|ZP_05686801.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9635]
gi|417891835|ref|ZP_12535892.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21200]
gi|418308711|ref|ZP_12920317.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21194]
gi|418559226|ref|ZP_13123772.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21252]
gi|418889035|ref|ZP_13443171.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1524]
gi|418993863|ref|ZP_13541499.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG290]
gi|257845945|gb|EEV69974.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9635]
gi|341851121|gb|EGS92050.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21200]
gi|365237737|gb|EHM78580.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21194]
gi|371975517|gb|EHO92811.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21252]
gi|377745913|gb|EHT69888.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG290]
gi|377754545|gb|EHT78454.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1524]
Length = 294
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|384550000|ref|YP_005739252.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302332849|gb|ADL23042.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 294
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKSTAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|163814004|ref|ZP_02205397.1| hypothetical protein COPEUT_00156 [Coprococcus eutactus ATCC 27759]
gi|158450698|gb|EDP27693.1| ribosome biogenesis GTP-binding protein YlqF [Coprococcus eutactus
ATCC 27759]
Length = 279
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 131/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRMMQEDIKLIDIVIELVDARIPLSSKNPDIDELAKNKYRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W Y++++G V N + G G ++ + + + + R +G++ R +R
Sbjct: 63 ADDAVTAKWEKYYSEKGFFVAKINARDGAGMKSINGIVQEACREKIERDRKRGIINRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN ++ +PGVT+ +W+R GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTFINSYARKACTKVGNKPGVTKGKQWIRLGKNIELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+A ++LA I + +V D+A L++ L
Sbjct: 183 EAVGLRLAYIGSINDEILNVTDIAVELIKFL 213
>gi|332686611|ref|YP_004456385.1| 50S ribosomal subunit maturation GTPase RbgA [Melissococcus
plutonius ATCC 35311]
gi|332370620|dbj|BAK21576.1| 50S ribosomal subunit maturation GTPase RbgA [Melissococcus
plutonius ATCC 35311]
Length = 284
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 123/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ ++LK +D+V E+ DAR+PLS+ +P++DQ + +KR+++LN+ D+
Sbjct: 3 IQWYPGHMAKAKREVTEKLKYVDIVFELIDARLPLSSRNPMLDQIIQQKKRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF G + N + G K+ AK + + + KGL R ++
Sbjct: 63 ADPDQNKKWVNYFTNLGNTALLVNAKQDKGINKIVLAAKETLKEKQAREKEKGLKKRPIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G DLE LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLMNRLIGKKVAQTGNKPGVTKGQQWLRVGNDLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I ++ D+A
Sbjct: 183 PEVGKKLALTGAIKDQLLYSDDLA 206
>gi|254974803|ref|ZP_05271275.1| putative GTPase [Clostridium difficile QCD-66c26]
gi|255092191|ref|ZP_05321669.1| putative GTPase [Clostridium difficile CIP 107932]
gi|255313930|ref|ZP_05355513.1| putative GTPase [Clostridium difficile QCD-76w55]
gi|255516609|ref|ZP_05384285.1| putative GTPase [Clostridium difficile QCD-97b34]
gi|255649709|ref|ZP_05396611.1| putative GTPase [Clostridium difficile QCD-37x79]
gi|306519822|ref|ZP_07406169.1| putative GTPase [Clostridium difficile QCD-32g58]
gi|384360454|ref|YP_006198306.1| GTPase [Clostridium difficile BI1]
Length = 298
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 126/214 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K+ LKL+DVVIE+ DARIP S+ +P +D+ +G++ R++VLN+ DM
Sbjct: 16 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ K K I + G+G + K + + + KG RA+R
Sbjct: 76 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINNIIEECKNVTREKMSSLKDKGRKERAIR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ +PGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 136 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 195
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D +A L++ L +I
Sbjct: 196 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKI 229
>gi|332799158|ref|YP_004460657.1| ribosome biogenesis GTP-binding protein YlqF [Tepidanaerobacter
acetatoxydans Re1]
gi|332696893|gb|AEE91350.1| ribosome biogenesis GTP-binding protein YlqF [Tepidanaerobacter
acetatoxydans Re1]
Length = 285
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 127/211 (60%), Gaps = 9/211 (4%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AKT+K +KD LKL+DVV+E+ DAR PLST P ++ +GN+ I+++N+ D+
Sbjct: 3 IQWYPGHMAKTKKMIKDNLKLVDVVLELTDARAPLSTHLPDINSLIGNKNSIMIMNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF KQG K I N ++K S L NVK+++ + R+ R
Sbjct: 63 ADKKITDMWLKYFKKQGIKAIAVN------SLKKSELKNLYNLLGNVKKKT---VLRSTR 113
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLIN++ R+ A PGVTR W++ +LE LD+PGI+ + D
Sbjct: 114 CMIIGIPNVGKSSLINQMAGRKSARTADIPGVTRNKMWLKVDDNLELLDTPGILWPKFED 173
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ IKLAI I + D ++ IL++ L
Sbjct: 174 KTTGIKLAILGSIKQELLDFEKLSLILIKYL 204
>gi|379727377|ref|YP_005319562.1| 50S ribosomal subunit maturation GTPase RbgA [Melissococcus
plutonius DAT561]
gi|376318280|dbj|BAL62067.1| 50S ribosomal subunit maturation GTPase RbgA [Melissococcus
plutonius DAT561]
Length = 284
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 123/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ ++LK +D+V E+ DAR+PLS+ +P++DQ + +KR+++LN+ D+
Sbjct: 3 IQWYPGHMAKAKREVAEKLKYVDIVFELIDARLPLSSRNPMLDQIIQQKKRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF G + N + G K+ AK + + + KGL R ++
Sbjct: 63 ADPDQNKKWVNYFTNLGNTALLVNAKQDKGINKIVLAAKETLKEKQAREKEKGLKKRPIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G DLE LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLMNRLIGKKVAQTGNKPGVTKGQQWLRVGNDLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I ++ D+A
Sbjct: 183 PEVGKKLALTGAIKDQLLYSDDLA 206
>gi|260682865|ref|YP_003214150.1| GTPase [Clostridium difficile CD196]
gi|260686463|ref|YP_003217596.1| GTPase [Clostridium difficile R20291]
gi|260209028|emb|CBA62129.1| putative GTPase [Clostridium difficile CD196]
gi|260212479|emb|CBE03390.1| putative GTPase [Clostridium difficile R20291]
Length = 301
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 126/214 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +K+ LKL+DVVIE+ DARIP S+ +P +D+ +G++ R++VLN+ DM
Sbjct: 19 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 78
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ K K I + G+G + K + + + KG RA+R
Sbjct: 79 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINNIIEECKNVTREKMSSLKDKGRKERAIR 138
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ +PGVT+ +WVR +LE LD+PGI+ + D
Sbjct: 139 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 198
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + D +A L++ L +I
Sbjct: 199 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKI 232
>gi|27467839|ref|NP_764476.1| ribosomal biogenesis GTPase [Staphylococcus epidermidis ATCC 12228]
gi|251810676|ref|ZP_04825149.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|282876323|ref|ZP_06285190.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis SK135]
gi|293366791|ref|ZP_06613467.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis M23864:W2(grey)]
gi|417656693|ref|ZP_12306376.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU028]
gi|417659010|ref|ZP_12308623.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU045]
gi|417909938|ref|ZP_12553671.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU037]
gi|417913333|ref|ZP_12557000.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU109]
gi|418605315|ref|ZP_13168640.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU041]
gi|418607736|ref|ZP_13170959.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU057]
gi|418609824|ref|ZP_13172958.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU065]
gi|418616549|ref|ZP_13179473.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU120]
gi|418622162|ref|ZP_13184918.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU123]
gi|418624370|ref|ZP_13187045.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU125]
gi|418628990|ref|ZP_13191506.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU127]
gi|418664729|ref|ZP_13226195.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU081]
gi|419768058|ref|ZP_14294195.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-250]
gi|419770965|ref|ZP_14297027.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-K]
gi|420165219|ref|ZP_14671923.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM088]
gi|420169786|ref|ZP_14676364.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM070]
gi|420172756|ref|ZP_14679254.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM067]
gi|420182914|ref|ZP_14689047.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM049]
gi|420187551|ref|ZP_14693571.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM039]
gi|420194018|ref|ZP_14699847.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM021]
gi|420197136|ref|ZP_14702860.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM020]
gi|420202042|ref|ZP_14707637.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM018]
gi|420206436|ref|ZP_14711946.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM008]
gi|420209477|ref|ZP_14714914.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM003]
gi|420214276|ref|ZP_14719555.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH05005]
gi|420216106|ref|ZP_14721328.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH05001]
gi|420220026|ref|ZP_14725016.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH04008]
gi|420221964|ref|ZP_14726889.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH08001]
gi|420224827|ref|ZP_14729665.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH06004]
gi|420227035|ref|ZP_14731808.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH05003]
gi|420229358|ref|ZP_14734064.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH04003]
gi|420231716|ref|ZP_14736361.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH051668]
gi|421607254|ref|ZP_16048500.1| GTPase YlqF [Staphylococcus epidermidis AU12-03]
gi|27315384|gb|AAO04518.1|AE016747_15 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|251805836|gb|EES58493.1| GTP-binding protein [Staphylococcus epidermidis BCM-HMP0060]
gi|281295348|gb|EFA87875.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis SK135]
gi|291319092|gb|EFE59462.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis M23864:W2(grey)]
gi|329736354|gb|EGG72626.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU028]
gi|329736649|gb|EGG72915.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU045]
gi|341652547|gb|EGS76335.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU037]
gi|341655615|gb|EGS79339.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU109]
gi|374402412|gb|EHQ73437.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU041]
gi|374403853|gb|EHQ74848.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU057]
gi|374406160|gb|EHQ77063.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU065]
gi|374410175|gb|EHQ80936.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU081]
gi|374820627|gb|EHR84703.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU120]
gi|374827537|gb|EHR91399.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU123]
gi|374827599|gb|EHR91460.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU125]
gi|374834984|gb|EHR98615.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU127]
gi|383360979|gb|EID38362.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-250]
gi|383362514|gb|EID39866.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-K]
gi|394236386|gb|EJD81920.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM088]
gi|394241433|gb|EJD86847.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM067]
gi|394243086|gb|EJD88460.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM070]
gi|394249377|gb|EJD94590.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM049]
gi|394255993|gb|EJE00929.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM039]
gi|394265943|gb|EJE10589.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM020]
gi|394266716|gb|EJE11341.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM021]
gi|394270015|gb|EJE14538.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM018]
gi|394278275|gb|EJE22592.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM008]
gi|394278924|gb|EJE23236.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM003]
gi|394283641|gb|EJE27806.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH05005]
gi|394287033|gb|EJE31007.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH04008]
gi|394289995|gb|EJE33865.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH08001]
gi|394292556|gb|EJE36298.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH05001]
gi|394294230|gb|EJE37916.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH06004]
gi|394297536|gb|EJE41133.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH05003]
gi|394299124|gb|EJE42675.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH04003]
gi|394302258|gb|EJE45706.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIH051668]
gi|406657046|gb|EKC83439.1| GTPase YlqF [Staphylococcus epidermidis AU12-03]
Length = 287
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 127/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W YF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWEIYFKNEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|326389497|ref|ZP_08211064.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
ethanolicus JW 200]
gi|325994502|gb|EGD52927.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
ethanolicus JW 200]
Length = 277
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DVV E+ DARIP S+ +P +D + N+KRI++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRIILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF ++G + + N G G +++ + + D+ K++ KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKEKGIEAVKVNSITGFGLKEINEATQRVCQDILDKKKQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPY-FDLLDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + D+ ++A LV +L +
Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKK 212
>gi|284047853|ref|YP_003398192.1| ribosome biogenesis GTP-binding protein YlqF [Acidaminococcus
fermentans DSM 20731]
gi|283952074|gb|ADB46877.1| ribosome biogenesis GTP-binding protein YlqF [Acidaminococcus
fermentans DSM 20731]
Length = 295
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 124/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++ ++ LKL+DVV+E+ DARIP S+ +P++ Q +G +++I+VLN+ DM
Sbjct: 12 IQWFPGHMTKAKRMMEANLKLVDVVVELLDARIPRSSANPMLQQLIGAKQKIVVLNKTDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +YF K + + Q G G L + K R KG+ R++R
Sbjct: 72 ADPERTQAWLSYFKKNSFTALEVDCQKGKGVKALVSAIQKAGEPTLEKWRKKGVRNRSIR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LINRLL + A +PGVTR +WV GK LE LD+PG++ + +
Sbjct: 132 VMIVGIPNVGKSTLINRLLGKNKAAAQNKPGVTRGPQWVILGKGLELLDTPGVLWPKFDN 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
LA+ I E +D ILVQ L ++
Sbjct: 192 PETGFCLAVTGAIREEVFDQETAVHILVQRLLKL 225
>gi|73662832|ref|YP_301613.1| ribosomal biogenesis GTPase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495347|dbj|BAE18668.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
Length = 286
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIQQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +YF ++G + + + G G ++ + A + K + KGL PRA+R
Sbjct: 63 ANLKELEKWESYFKEKGFYPVAIDAKHGKGLKQVEQTAIKATKEKFEKEKQKGLTPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L + + PGVT+ +W++ G+ L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANKSIAKTGNTPGVTKQQQWIKVGQSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KL++ I + + +VA
Sbjct: 183 QLVGKKLSVTGAIKDSIVHLDEVA 206
>gi|23098994|ref|NP_692460.1| hypothetical protein OB1539 [Oceanobacillus iheyensis HTE831]
gi|22777222|dbj|BAC13495.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 285
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 129/212 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL+D VIE+ DAR PLS+ +P++ Q L N+ +++VL ++D+
Sbjct: 3 IQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F + GT+ I N K+ + AK L D K + KG+ PR R
Sbjct: 63 ADQEVTKRWVDKFNEDGTQAIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRPAR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL +++ RPG+T+ W++ KD E LD+PGI+ + +
Sbjct: 123 AMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLWIKVKKDFELLDTPGILWPKFEE 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ +LA I ++ + DV A +++ ++
Sbjct: 183 EVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMS 214
>gi|257884858|ref|ZP_05664511.1| GTP-binding protein [Enterococcus faecium 1,231,501]
gi|257820696|gb|EEV47844.1| GTP-binding protein [Enterococcus faecium 1,231,501]
Length = 286
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVAAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|417910786|ref|ZP_12554502.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU105]
gi|341654974|gb|EGS78710.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis VCU105]
Length = 287
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 127/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDYVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W YF +G + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWEIYFKNEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|336392851|ref|ZP_08574250.1| putative GTP-binding protein [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 285
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +K+++++L L+D+V+E+ DAR+PL++ +P++DQ + + R+++LN+ D+
Sbjct: 4 IQWFPGHMAKAKKQVQEKLHLVDIVLEIVDARLPLASRNPILDQIIQQKPRLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW YF + G I + Q ++ + A+ + +D +++++G+ + +R
Sbjct: 64 ADPALNAAWINYFKQHGLPAISIDSQHNHNVQQIEKQAQVILADKIARQQARGIKNKPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+KR + PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 124 AICIGIPNVGKSTILNRLVKRNVAITGNHPGVTKKQQWLKAGKSLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I + Y DVA
Sbjct: 184 PLVGKKLALTGAIKDSLYHADDVA 207
>gi|430821967|ref|ZP_19440548.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0120]
gi|430864451|ref|ZP_19480373.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1574]
gi|431743482|ref|ZP_19532361.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2071]
gi|430443799|gb|ELA53761.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0120]
gi|430553998|gb|ELA93672.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1574]
gi|430606914|gb|ELB44251.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2071]
Length = 286
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAVYGLDFFAR 215
>gi|258514488|ref|YP_003190710.1| GTP-binding protein HSR1-related [Desulfotomaculum acetoxidans DSM
771]
gi|257778193|gb|ACV62087.1| GTP-binding protein HSR1-related [Desulfotomaculum acetoxidans DSM
771]
Length = 283
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 124/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AKT++ L + LKL+DVV+E+ DARIP S+ +P+++ L + R++VLN+ D+
Sbjct: 3 IQWYPGHMAKTKRLLLENLKLVDVVVELLDARIPCSSRNPVINDLLSKKPRLIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W A+ G V+ N G G ++ LA +V K ++KG RAVR
Sbjct: 63 ADPNYTALWKRELAEPGAMVVDVNSVKGSGIKAITPALNKLAEEVMNKLKNKGRRTRAVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS IN L+KR++ +PGVTR +W++ KDLE LD+PGI+ + D
Sbjct: 123 CMVVGIPNVGKSFFINTLVKRKITKTGDKPGVTRGQQWIKVAKDLELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q A KLA+ I D+ +++
Sbjct: 183 QEVAYKLAVTGAIKSEVLDIKELS 206
>gi|416134962|ref|ZP_11598423.1| GTP-binding protein [Enterococcus faecium E4452]
gi|364092392|gb|EHM34773.1| GTP-binding protein [Enterococcus faecium E4452]
Length = 286
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSHNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|338813257|ref|ZP_08625386.1| GTP-binding protein HSR1-related protein [Acetonema longum DSM
6540]
gi|337274616|gb|EGO63124.1| GTP-binding protein HSR1-related protein [Acetonema longum DSM
6540]
Length = 281
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AK + + + LKL+DVVIE+ DARIP S+ +P++ + +G++ R++ N+ D+
Sbjct: 3 IHWFPGHMAKARRVISEHLKLIDVVIELLDARIPESSANPMIQEIVGDKPRVIAFNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F +QG V G G +L + + A++ K +KG+ R VR
Sbjct: 63 ADSRHTEQWMARFKEQGLPVAAIEAVSGKGLKQLIQYVEQAAAEKLAKWEAKGIKSRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKSSLINRLL A RPGVTR +W++ G LE LD+PG++ ++ D
Sbjct: 123 AMVLGIPNVGKSSLINRLLGTATVKTANRPGVTRGQQWIKIGNRLELLDTPGVLWPKMDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA A KLA+ + + YD V LV L
Sbjct: 183 QAVAFKLAVTGAVKDDVYDYDTVLKQLVDFL 213
>gi|420145723|ref|ZP_14653178.1| Ribosome biogenesis GTPase A [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402623|gb|EJN55941.1| Ribosome biogenesis GTPase A [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 285
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 130/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +K+++++L L+D+V+E+ DAR+PL++ +P++DQ + + R+++LN+ D+
Sbjct: 4 IQWFPGHMAKAKKQVQEKLHLVDIVLEIVDARLPLASRNPILDQIIQQKPRLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW YF + G I + Q ++ + A+ + +D +++++G+ + +R
Sbjct: 64 ADPALNAAWINYFKQHGLPAISIDSQHNHNVQQIEKQAQVILADKIARQQARGIKNKPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+KR + PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 124 AICIGIPNVGKSTILNRLVKRNVAITGNHPGVTKKQQWLKAGKSLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I + Y DVA
Sbjct: 184 PLVGKKLALTGAIKDSLYHADDVA 207
>gi|354584941|ref|ZP_09003832.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus lactis
154]
gi|353191058|gb|EHB56567.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus lactis
154]
Length = 288
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 130/214 (60%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++++++LKL+D VIE+ DAR+PLS+ +P++D+ L + R++++N+ D+
Sbjct: 3 IQWFPGHMTKARRQIQEKLKLIDAVIELIDARLPLSSRNPMVDEILQGKPRLMLMNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + G G ++ K L + K+ +KG+ PRA+R
Sbjct: 63 ADPEVTRQWIAYFKEQGQPAFPVDASTGTGVKEIPGQIKLLLKEKIDKQIAKGMNPRAMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-GKDLEFLDSPGIIPMRIS 278
IVG PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ +
Sbjct: 123 VLIVGIPNVGKSTLINRLAGRNIAETGDRPGVTKGQQWIKVTGGEMELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
DQ +LA+ I E +V D+A ++ ++
Sbjct: 183 DQNVGYRLAVTGAIKEEILNVEDIAFFAIKYFSK 216
>gi|418324108|ref|ZP_12935359.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
pettenkoferi VCU012]
gi|365227605|gb|EHM68797.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
pettenkoferi VCU012]
Length = 289
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + ++ R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVVQHKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F QG + + + G K+ + A + + + KGL PRA+R
Sbjct: 63 ANLNELDKWQEHFKAQGYYPVAVDAKHGRSLKKVEQAATEATKEKFEREKEKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKKSIAKTGNTPGVTKQQQWIKVGKALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ KL+I I + + +VA + L
Sbjct: 183 ETVGKKLSITGAIKDSIVHLDEVAIFGLNFL 213
>gi|337750071|ref|YP_004644233.1| protein RbgA [Paenibacillus mucilaginosus KNP414]
gi|336301260|gb|AEI44363.1| RbgA [Paenibacillus mucilaginosus KNP414]
Length = 294
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 130/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++D+LKL+D+ IE+ DARIPLS+ +P++D+ L N+ R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIQDKLKLIDLAIELLDARIPLSSRNPMIDEILLNKPRLVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA+QG + + G ++ +K L + + KG+ PRA+R
Sbjct: 63 ADPERTKEWVAYFAEQGLNAVPIDSVGGNPVKEIMNRSKDLLEEKIAAQVRKGINPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R++ +PGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRMAGRKIAATGDKPGVTKGQQWIKVGTEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA I E ++A ++ L +
Sbjct: 183 QTVGFRLAATGAIKEEILHPEEIALFAMRYLTQ 215
>gi|153854844|ref|ZP_01996067.1| hypothetical protein DORLON_02072 [Dorea longicatena DSM 13814]
gi|149752546|gb|EDM62477.1| ribosome biogenesis GTP-binding protein YlqF [Dorea longicatena DSM
13814]
Length = 282
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 130/210 (61%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DAR+P+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARVPISSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AW+ YF ++G V+ N + G G ++ + + + + R +G+L R VRA
Sbjct: 64 EDKWNDAWSEYFREKGFSVVKVNSKKGGGIKSINGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ R DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPRFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
A +KLA I + ++AA LV+ +
Sbjct: 184 AVGLKLAFIGSIKDEILQTEELAAELVKFM 213
>gi|302386483|ref|YP_003822305.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
saccharolyticum WM1]
gi|302197111|gb|ADL04682.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
saccharolyticum WM1]
Length = 280
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D++IE+ DAR+PLS+ +P +D+ + RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLIIELVDARVPLSSRNPDIDELGAGKARIVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +YF QG V+ N + G G +++ + + + + R +G+L R VR
Sbjct: 63 ADERCNSVWQSYFETQGCHVVKVNSRNGAGLKQINGVVQEACKEKIERDRRRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + RPGVT+ +W+R K LE LD+PGI+ R D
Sbjct: 123 AMVVGIPNVGKSTFINSFAGKACAKTGNRPGVTKGNQWIRLNKSLELLDTPGILWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q I+LA+ + + + ++A L++ L +
Sbjct: 183 QQVGIRLALIGSVNDEILNKDELAMELIRFLTK 215
>gi|345017764|ref|YP_004820117.1| hypothetical protein Thewi_1411 [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033107|gb|AEM78833.1| LOW QUALITY PROTEIN: hypothetical protein Thewi_1411
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 277
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DVV E+ DARIP S+ +P +D + N+KRI++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRIILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF ++G + + N G G +++ + + D+ K++ KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKEKGIEAVKVNSITGFGLKEINEATQRVCQDILDKKKQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPY-FDLLDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LAI I + D+ ++A LV +L +
Sbjct: 180 KKVGVMLAITGAIKDEILDIEEIALNLVAILKK 212
>gi|379722919|ref|YP_005315050.1| protein RbgA [Paenibacillus mucilaginosus 3016]
gi|386725697|ref|YP_006192023.1| protein RbgA [Paenibacillus mucilaginosus K02]
gi|378571591|gb|AFC31901.1| RbgA [Paenibacillus mucilaginosus 3016]
gi|384092822|gb|AFH64258.1| protein RbgA [Paenibacillus mucilaginosus K02]
Length = 294
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 130/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++D+LKL+D+ IE+ DARIPLS+ +P++D+ L N+ R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIQDKLKLIDLAIELLDARIPLSSRNPMIDEILLNKPRLVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YFA+QG + + G ++ +K L + + KG+ PRA+R
Sbjct: 63 ADPERTKEWVAYFAEQGLNAVPIDSVGGNPVKEIMNRSKDLLEEKIAAQVRKGINPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R++ +PGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRMAGRKIAATGDKPGVTKGQQWIKVGTEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA I E ++A ++ L +
Sbjct: 183 QTVGFRLAATGAIKEEILHPEEIALFAMRYLTQ 215
>gi|420199029|ref|ZP_14704713.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM031]
gi|394272715|gb|EJE17165.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
epidermidis NIHLM031]
Length = 287
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 127/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W TYF + + + + G + A + + ++KGL PRA+R
Sbjct: 63 TNLKELEKWETYFKDESFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSITETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|293568166|ref|ZP_06679502.1| GTP-binding protein [Enterococcus faecium E1071]
gi|314938031|ref|ZP_07845341.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133a04]
gi|314941983|ref|ZP_07848844.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133C]
gi|314948764|ref|ZP_07852136.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0082]
gi|314951782|ref|ZP_07854821.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133A]
gi|314991811|ref|ZP_07857269.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133B]
gi|314995852|ref|ZP_07860939.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133a01]
gi|389868316|ref|YP_006375739.1| ribosome biogenesis GTP-binding protein [Enterococcus faecium DO]
gi|424779675|ref|ZP_18206586.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
V689]
gi|424794597|ref|ZP_18220544.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
S447]
gi|424825722|ref|ZP_18250685.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R501]
gi|424855823|ref|ZP_18280121.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R499]
gi|424866148|ref|ZP_18289997.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R497]
gi|424938571|ref|ZP_18354355.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R496]
gi|424952498|ref|ZP_18367515.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R494]
gi|424956838|ref|ZP_18371598.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R446]
gi|424959384|ref|ZP_18373973.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1986]
gi|424963125|ref|ZP_18377390.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1190]
gi|424967388|ref|ZP_18381091.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1140]
gi|424969857|ref|ZP_18383405.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1139]
gi|424973476|ref|ZP_18386753.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1137]
gi|424976285|ref|ZP_18389388.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1123]
gi|424980599|ref|ZP_18393381.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV99]
gi|424983189|ref|ZP_18395789.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV69]
gi|424986601|ref|ZP_18399010.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV38]
gi|424989599|ref|ZP_18401859.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV26]
gi|424995261|ref|ZP_18407157.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV168]
gi|424997214|ref|ZP_18408979.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV165]
gi|425001557|ref|ZP_18413061.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV161]
gi|425003209|ref|ZP_18414588.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV102]
gi|425009197|ref|ZP_18420229.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV1]
gi|425010142|ref|ZP_18421112.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E422]
gi|425013313|ref|ZP_18424049.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E417]
gi|425017282|ref|ZP_18427795.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
C621]
gi|425019858|ref|ZP_18430195.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
C497]
gi|425022883|ref|ZP_18433036.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
C1904]
gi|425031327|ref|ZP_18436464.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
515]
gi|425036885|ref|ZP_18441600.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
514]
gi|425039240|ref|ZP_18443797.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
513]
gi|425043851|ref|ZP_18448053.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
511]
gi|425044394|ref|ZP_18448556.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
510]
gi|425049526|ref|ZP_18453373.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
509]
gi|425051442|ref|ZP_18455108.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
506]
gi|425060028|ref|ZP_18463338.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
503]
gi|447912908|ref|YP_007394320.1| 50S ribosomal subunit maturation GTPase RbgA ( YlqF) [Enterococcus
faecium NRRL B-2354]
gi|291589156|gb|EFF20968.1| GTP-binding protein [Enterococcus faecium E1071]
gi|313589956|gb|EFR68801.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133a01]
gi|313593622|gb|EFR72467.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133B]
gi|313596061|gb|EFR74906.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133A]
gi|313599235|gb|EFR78080.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133C]
gi|313642606|gb|EFS07186.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0133a04]
gi|313644830|gb|EFS09410.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX0082]
gi|388533565|gb|AFK58757.1| ribosome biogenesis GTP-binding protein [Enterococcus faecium DO]
gi|402925013|gb|EJX45189.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
V689]
gi|402925238|gb|EJX45399.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R501]
gi|402926391|gb|EJX46431.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
S447]
gi|402931138|gb|EJX50733.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R499]
gi|402936784|gb|EJX55935.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R496]
gi|402939052|gb|EJX58010.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R497]
gi|402941118|gb|EJX59871.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R494]
gi|402944938|gb|EJX63318.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
R446]
gi|402950239|gb|EJX68248.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1190]
gi|402950675|gb|EJX68658.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1986]
gi|402954529|gb|EJX72140.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1140]
gi|402958434|gb|EJX75747.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1137]
gi|402963190|gb|EJX80076.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1139]
gi|402966045|gb|EJX82716.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV99]
gi|402970088|gb|EJX86454.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
P1123]
gi|402972187|gb|EJX88405.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV69]
gi|402976063|gb|EJX91984.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV38]
gi|402977896|gb|EJX93669.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV168]
gi|402981481|gb|EJX97007.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV26]
gi|402986120|gb|EJY01267.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV161]
gi|402986623|gb|EJY01738.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV165]
gi|402990422|gb|EJY05295.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV1]
gi|402992483|gb|EJY07184.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
ERV102]
gi|403000950|gb|EJY15033.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E422]
gi|403001315|gb|EJY15376.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E417]
gi|403004617|gb|EJY18406.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
C621]
gi|403010679|gb|EJY24037.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
C497]
gi|403011633|gb|EJY24927.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
C1904]
gi|403013185|gb|EJY26312.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
514]
gi|403015972|gb|EJY28820.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
515]
gi|403016878|gb|EJY29667.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
513]
gi|403017894|gb|EJY30617.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
511]
gi|403027386|gb|EJY39279.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
509]
gi|403029919|gb|EJY41641.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
510]
gi|403037710|gb|EJY48974.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
506]
gi|403043020|gb|EJY53949.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
503]
gi|445188617|gb|AGE30259.1| 50S ribosomal subunit maturation GTPase RbgA ( YlqF) [Enterococcus
faecium NRRL B-2354]
Length = 307
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 24 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 83
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 84 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 143
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 144 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 203
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 204 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 236
>gi|430870490|ref|ZP_19483258.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1575]
gi|430558901|gb|ELA98293.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1575]
Length = 286
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|257878019|ref|ZP_05657672.1| GTP-binding protein [Enterococcus faecium 1,230,933]
gi|257881195|ref|ZP_05660848.1| GTP-binding protein [Enterococcus faecium 1,231,502]
gi|257889782|ref|ZP_05669435.1| GTP-binding protein [Enterococcus faecium 1,231,410]
gi|257892281|ref|ZP_05671934.1| GTP-binding protein [Enterococcus faecium 1,231,408]
gi|260559069|ref|ZP_05831255.1| GTP-binding protein [Enterococcus faecium C68]
gi|261207603|ref|ZP_05922288.1| GTP-binding protein [Enterococcus faecium TC 6]
gi|289565115|ref|ZP_06445568.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
D344SRF]
gi|293556763|ref|ZP_06675326.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1039]
gi|293563421|ref|ZP_06677870.1| GTP-binding protein [Enterococcus faecium E1162]
gi|294614823|ref|ZP_06694718.1| GTP-binding protein [Enterococcus faecium E1636]
gi|294617502|ref|ZP_06697133.1| GTP-binding protein [Enterococcus faecium E1679]
gi|294622302|ref|ZP_06701345.1| GTP-binding protein [Enterococcus faecium U0317]
gi|383328502|ref|YP_005354386.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
Aus0004]
gi|415896304|ref|ZP_11550792.1| GTP-binding protein [Enterococcus faecium E4453]
gi|427395155|ref|ZP_18888077.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus durans
FB129-CNAB-4]
gi|430820383|ref|ZP_19439016.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0045]
gi|430828355|ref|ZP_19446477.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0269]
gi|430830304|ref|ZP_19448362.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0333]
gi|430833511|ref|ZP_19451523.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0679]
gi|430836213|ref|ZP_19454197.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0680]
gi|430838884|ref|ZP_19456827.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0688]
gi|430844507|ref|ZP_19462405.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1050]
gi|430846488|ref|ZP_19464347.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1133]
gi|430850088|ref|ZP_19467854.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1185]
gi|430854405|ref|ZP_19472118.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1392]
gi|430858559|ref|ZP_19476186.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1552]
gi|430861967|ref|ZP_19479319.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1573]
gi|430958963|ref|ZP_19486827.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1576]
gi|431010066|ref|ZP_19489591.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1578]
gi|431194415|ref|ZP_19500268.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1620]
gi|431228379|ref|ZP_19501520.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1622]
gi|431259159|ref|ZP_19505336.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1623]
gi|431295455|ref|ZP_19507343.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1626]
gi|431368594|ref|ZP_19509408.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1627]
gi|431434730|ref|ZP_19513049.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1630]
gi|431503033|ref|ZP_19515269.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1634]
gi|431539213|ref|ZP_19517717.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1731]
gi|431626776|ref|ZP_19523015.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1904]
gi|431745763|ref|ZP_19534602.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2134]
gi|431748729|ref|ZP_19537484.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2297]
gi|431754408|ref|ZP_19543069.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2883]
gi|431758890|ref|ZP_19547510.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E3346]
gi|431766316|ref|ZP_19554807.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E4215]
gi|431766776|ref|ZP_19555237.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1321]
gi|431770395|ref|ZP_19558795.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1644]
gi|431772916|ref|ZP_19561252.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2369]
gi|431776217|ref|ZP_19564484.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2560]
gi|431778326|ref|ZP_19566537.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E4389]
gi|431782317|ref|ZP_19570453.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E6012]
gi|431785297|ref|ZP_19573323.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E6045]
gi|257812247|gb|EEV41005.1| GTP-binding protein [Enterococcus faecium 1,230,933]
gi|257816853|gb|EEV44181.1| GTP-binding protein [Enterococcus faecium 1,231,502]
gi|257826142|gb|EEV52768.1| GTP-binding protein [Enterococcus faecium 1,231,410]
gi|257828660|gb|EEV55267.1| GTP-binding protein [Enterococcus faecium 1,231,408]
gi|260074826|gb|EEW63142.1| GTP-binding protein [Enterococcus faecium C68]
gi|260077986|gb|EEW65692.1| GTP-binding protein [Enterococcus faecium TC 6]
gi|289163122|gb|EFD10969.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
D344SRF]
gi|291592285|gb|EFF23899.1| GTP-binding protein [Enterococcus faecium E1636]
gi|291596242|gb|EFF27504.1| GTP-binding protein [Enterococcus faecium E1679]
gi|291598194|gb|EFF29292.1| GTP-binding protein [Enterococcus faecium U0317]
gi|291601095|gb|EFF31384.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1039]
gi|291604682|gb|EFF34167.1| GTP-binding protein [Enterococcus faecium E1162]
gi|364091113|gb|EHM33616.1| GTP-binding protein [Enterococcus faecium E4453]
gi|378938196|gb|AFC63268.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
Aus0004]
gi|425724291|gb|EKU87175.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus durans
FB129-CNAB-4]
gi|430439619|gb|ELA49952.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0045]
gi|430482906|gb|ELA60005.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0333]
gi|430483650|gb|ELA60718.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0269]
gi|430486252|gb|ELA63111.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0679]
gi|430488787|gb|ELA65441.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0680]
gi|430491285|gb|ELA67758.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0688]
gi|430497097|gb|ELA73156.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1050]
gi|430536120|gb|ELA76497.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1185]
gi|430538935|gb|ELA79204.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1133]
gi|430545186|gb|ELA85172.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1552]
gi|430548064|gb|ELA87969.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1392]
gi|430549258|gb|ELA89090.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1573]
gi|430556648|gb|ELA96145.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1576]
gi|430560561|gb|ELA99857.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1578]
gi|430572084|gb|ELB10954.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1620]
gi|430574681|gb|ELB13444.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1622]
gi|430577254|gb|ELB15859.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1623]
gi|430581545|gb|ELB19990.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1626]
gi|430584182|gb|ELB22532.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1627]
gi|430587374|gb|ELB25605.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1630]
gi|430587656|gb|ELB25877.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1634]
gi|430594476|gb|ELB32445.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1731]
gi|430603030|gb|ELB40573.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1904]
gi|430609969|gb|ELB47141.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2134]
gi|430613055|gb|ELB50078.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2297]
gi|430619002|gb|ELB55830.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2883]
gi|430626853|gb|ELB63403.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E3346]
gi|430626899|gb|ELB63443.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E4215]
gi|430632011|gb|ELB68302.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1321]
gi|430635322|gb|ELB71418.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1644]
gi|430637432|gb|ELB73448.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2369]
gi|430641551|gb|ELB77352.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2560]
gi|430643872|gb|ELB79575.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E4389]
gi|430647784|gb|ELB83223.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E6045]
gi|430647954|gb|ELB83389.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E6012]
Length = 286
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|167037683|ref|YP_001665261.1| HSR1-like GTP-binding protein [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|320116098|ref|YP_004186257.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|166856517|gb|ABY94925.1| GTP-binding protein, HSR1-related [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929189|gb|ADV79874.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 277
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DVV E+ DARIP S+ +P +D + N+KRI++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRIILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF +G + + N G G +++ + D+ K++ KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKGKGIEAVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPY-FDLLDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + D+ ++A LV +L +
Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKK 212
>gi|257898824|ref|ZP_05678477.1| GTP-binding protein [Enterococcus faecium Com15]
gi|257836736|gb|EEV61810.1| GTP-binding protein [Enterococcus faecium Com15]
Length = 286
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|69246756|ref|ZP_00604104.1| GTP-binding protein [Enterococcus faecium DO]
gi|425057006|ref|ZP_18460442.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
504]
gi|68195110|gb|EAN09570.1| GTP-binding protein [Enterococcus faecium DO]
gi|403041302|gb|EJY52327.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
504]
Length = 293
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 10 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 69
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 70 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 129
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 130 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 189
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 190 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 222
>gi|227551190|ref|ZP_03981239.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|293377188|ref|ZP_06623396.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
PC4.1]
gi|293570273|ref|ZP_06681342.1| GTP-binding protein [Enterococcus faecium E980]
gi|424765200|ref|ZP_18192603.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX1337RF]
gi|425054012|ref|ZP_18457527.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
505]
gi|430840980|ref|ZP_19458901.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1007]
gi|431034777|ref|ZP_19491654.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1590]
gi|431102201|ref|ZP_19496812.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1613]
gi|431738013|ref|ZP_19526963.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1972]
gi|431740438|ref|ZP_19529353.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2039]
gi|431751528|ref|ZP_19540216.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2620]
gi|431756373|ref|ZP_19545005.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E3083]
gi|431761625|ref|ZP_19550187.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E3548]
gi|227179658|gb|EEI60630.1| GTP-binding protein [Enterococcus faecium TX1330]
gi|291609680|gb|EFF38941.1| GTP-binding protein [Enterococcus faecium E980]
gi|292644208|gb|EFF62310.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
PC4.1]
gi|402417222|gb|EJV49526.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
TX1337RF]
gi|403036936|gb|EJY48269.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
505]
gi|430494711|gb|ELA70946.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1007]
gi|430563492|gb|ELB02701.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1590]
gi|430570429|gb|ELB09390.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1613]
gi|430598049|gb|ELB35809.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1972]
gi|430603302|gb|ELB40832.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2039]
gi|430615309|gb|ELB52267.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E2620]
gi|430620227|gb|ELB57029.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E3083]
gi|430624317|gb|ELB60967.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E3548]
Length = 293
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 10 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 69
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 70 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 129
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 130 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 189
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 190 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 222
>gi|257887693|ref|ZP_05667346.1| GTP-binding protein [Enterococcus faecium 1,141,733]
gi|257896187|ref|ZP_05675840.1| GTP-binding protein [Enterococcus faecium Com12]
gi|430852787|ref|ZP_19470518.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1258]
gi|431070188|ref|ZP_19494196.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1604]
gi|431582091|ref|ZP_19520040.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1861]
gi|257823747|gb|EEV50679.1| GTP-binding protein [Enterococcus faecium 1,141,733]
gi|257832752|gb|EEV59173.1| GTP-binding protein [Enterococcus faecium Com12]
gi|430541621|gb|ELA81766.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1258]
gi|430567698|gb|ELB06773.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1604]
gi|430593981|gb|ELB31951.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E1861]
Length = 286
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|289578448|ref|YP_003477075.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
italicus Ab9]
gi|289528161|gb|ADD02513.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
italicus Ab9]
Length = 277
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DV+ E+ DARIP S+ +P +D + N+KR+++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVIYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF ++G + I N G G +++ + + D+ K+R KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKEKGIEAIKVNSITGFGLKEINEATQRVCQDILEKKRQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GIIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRTLHWIKTPY-FDILDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + ++ ++A LV +L +
Sbjct: 180 KETGIMLAITGAIKDEILNIEEIALNLVAILKK 212
>gi|297544724|ref|YP_003677026.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842499|gb|ADH61015.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 277
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DV+ E+ DARIP S+ +P +D + N+KR+++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVIYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF ++G + I N G G +++ + + D+ K+R KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKEKGIEAIKVNSITGFGLKEINEATQRVCQDILEKKRQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GIIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRTLHWIKTPY-FDILDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + ++ ++A LV +L +
Sbjct: 180 KETGIMLAITGAIKDEILNIEEIALNLVAVLKK 212
>gi|392960563|ref|ZP_10326031.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
DSM 17108]
gi|421054680|ref|ZP_15517645.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
B4]
gi|421061048|ref|ZP_15523432.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
B3]
gi|421063740|ref|ZP_15525686.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
A12]
gi|421071543|ref|ZP_15532659.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
A11]
gi|392440361|gb|EIW18041.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
B4]
gi|392446808|gb|EIW24079.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
A11]
gi|392452123|gb|EIW29076.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
B3]
gi|392455140|gb|EIW31947.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
DSM 17108]
gi|392462310|gb|EIW38405.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
A12]
Length = 286
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ K + ++ LKL+DVVIE+ DARIP+S+ +P++ Q L + R++ LN+ D+
Sbjct: 6 INWFPGHMTKALRMIQANLKLVDVVIELLDARIPVSSANPVIHQILEGKPRVVALNKIDL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F QG +V+ + G GT L + L S K +KG+ PRAVR
Sbjct: 66 AEPEWTKQWVDTFHAQGLQVVTIDSMTGRGTKALVSQVEQLGSAKAAKLVAKGVNPRAVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKSSLINRLL + A +PGVTR +W+ GK+LE LD+PG++ + D
Sbjct: 126 AMILGIPNVGKSSLINRLLGTKAVRTADKPGVTRGKQWITIGKNLELLDTPGVLWPKFED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I + YDV + L+ L
Sbjct: 186 PEVGFKLAMTGAINDDIYDVETAMSKLLLFL 216
>gi|427405689|ref|ZP_18895894.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp.
F0473]
gi|425708530|gb|EKU71569.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp.
F0473]
Length = 302
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +K+ LKL+D+V+E+ DARIP+S+ +P++ + + R R++VLN+ D+
Sbjct: 12 LQWYPGHMRKAERLVKENLKLVDMVVELLDARIPMSSANPVLREIVAGRPRLVVLNKSDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YFA Q + + G G +L + + LA K G PRA R
Sbjct: 72 AEPTATRAWVQYFASQDIVAVPVDAVKGRGIKELVQEIQRLAVPRTEKLAKHGAKPRAAR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 132 CMILGIPNVGKSSLINRLSGGARTKVENRPGVTRAKQWIRIGAQLELLDMPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
AA++LA I + YDV V L++ L
Sbjct: 192 AQAALRLAFTGAISDTVYDVGGVVLQLLRAL 222
>gi|375085143|ref|ZP_09731852.1| ribosome biogenesis GTP-binding protein YlqF [Megamonas funiformis
YIT 11815]
gi|374567559|gb|EHR38772.1| ribosome biogenesis GTP-binding protein YlqF [Megamonas funiformis
YIT 11815]
Length = 293
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 78 EEECDWADLDADLYYWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTT 137
EE + DL +L + W+PGH+AK ++ + + LKL+DVVIE+RDARIP S+
Sbjct: 2 EENMQYDDLG--------TLAQLNWFPGHMAKAKRIIVENLKLVDVVIELRDARIPNSSA 53
Query: 138 HPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLA 197
+P++ +G + ++ LN+ D+ N W YF G V+ N G G +L +A
Sbjct: 54 NPILKDLIGKKPHLIALNKIDLADNNINNKWEEYFTSMGKSVVKINSLDGKGIRQLVTVA 113
Query: 198 KALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKW 257
LA K +KG+ PR R IVG PNVGKSSLINRL A +PGVTR +W
Sbjct: 114 DELAKVKTAKFANKGVKPRNARVMIVGIPNVGKSSLINRLSGSASLKTADKPGVTRAKQW 173
Query: 258 VRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADVAAILV 307
++ +L+ LD+PGI+ + D + LA I + YD+ A IL+
Sbjct: 174 IKIKNNLDLLDTPGILWPKFEDPEVGLNLAFTGAISDEVYDIERAAEILL 223
>gi|255657929|ref|ZP_05403338.1| ribosome biogenesis GTP-binding protein YlqF [Mitsuokella multacida
DSM 20544]
gi|260850122|gb|EEX70129.1| ribosome biogenesis GTP-binding protein YlqF [Mitsuokella multacida
DSM 20544]
Length = 307
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 124/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++ +++ LKL+DVVIE+ DARIP S+ +P++ + + + R++ LN+ D+
Sbjct: 12 IQWFPGHMKKAQRLIEENLKLVDVVIELLDARIPASSANPMLAEIIKGKPRLIALNKSDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + G G +L A+ LA + G PRA R
Sbjct: 72 ADAASTKRWLAYFRAQGIPAVAIDSVKGRGMKQLVAKAEELARPKTDRFVKAGGRPRAAR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL AA +PGVTR +W++ G L+ LD+PGI+ + D
Sbjct: 132 CMILGIPNVGKSSLINRLAGAVKAKAADKPGVTRAKQWIKIGAALDLLDTPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLA I + YD V A+L+ ++ R
Sbjct: 192 QTVGLKLAFTGAINDEIYDREQVTALLLSVMRR 224
>gi|333394924|ref|ZP_08476743.1| putative GTP-binding protein [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 285
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 129/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +K+++++L L+D+V+E+ DAR+PL++ +P++DQ + + R+++LN+ D+
Sbjct: 4 IQWYPGHMAKAKKQVQEKLHLVDIVLEIVDARLPLASRNPILDQIIQQKPRLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW YF + I + Q ++ + A+ + +D +++++G+ + +R
Sbjct: 64 ADPALNAAWINYFKQHDLPAISIDSQHNHNVQQIEKQAQVILADKIARQQARGIKNKPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+KR + PGVT+ +W++ GK LE LD+PGI+ + D
Sbjct: 124 AICIGIPNVGKSTILNRLVKRNVAITGNHPGVTKKQQWLKAGKSLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I + Y DVA
Sbjct: 184 PLVGKKLALTGAIKDSLYHADDVA 207
>gi|421074171|ref|ZP_15535211.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
JBW45]
gi|392527677|gb|EIW50763.1| ribosome biogenesis GTP-binding protein YlqF [Pelosinus fermentans
JBW45]
Length = 286
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ K + ++ LKL+DVVIE+ DARIP+S+ +P++ Q L + R++ LN+ D+
Sbjct: 6 INWFPGHMTKALRMIQANLKLVDVVIELLDARIPVSSANPVIHQILEGKPRVVALNKIDL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F QG +V+ + G GT L + L S K +KG+ PRAVR
Sbjct: 66 AEPEWTKQWVDTFHVQGLQVVTIDSMTGKGTKALVSQVEQLGSAKAAKLVAKGVNPRAVR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKSSLINRLL + A +PGVTR +W+ GK+LE LD+PG++ + D
Sbjct: 126 AMILGIPNVGKSSLINRLLGTKAVRTADKPGVTRGKQWITIGKNLELLDTPGVLWPKFED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I + YDV + L+ L
Sbjct: 186 PEVGFKLAMTGAINDDIYDVETAMSKLLLFL 216
>gi|291534103|emb|CBL07216.1| Ras superfamily GTP-binding protein YlqF [Megamonas hypermegale
ART12/1]
Length = 269
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 121/212 (57%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+L + W+PGH+AK ++ + + LKL+DVVIE+RDARIP S+ +P++ +G + ++ LN
Sbjct: 12 TLAQLNWFPGHMAKAKRIIVENLKLVDVVIELRDARIPNSSANPILKDLIGKKPHLIALN 71
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ D+ N W YF G V+ N G G +L +A LA K +KG+ P
Sbjct: 72 KIDLADNNINNKWEEYFTSMGKSVVKINSLDGKGIRQLVTVADELAKVKTAKFANKGVKP 131
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R R IVG PNVGKSSLINRL A +PGVTR +W++ +L+ LD+PGI+
Sbjct: 132 RNARVMIVGIPNVGKSSLINRLSGSASLKTADKPGVTRAKQWIKIKNNLDLLDTPGILWP 191
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILV 307
+ D + LA I + YD+ A IL+
Sbjct: 192 KFEDPEVGLNLAFTGAISDEVYDIERAAEILL 223
>gi|295094902|emb|CBK83993.1| ribosome biogenesis GTP-binding protein YlqF [Coprococcus sp.
ART55/1]
Length = 282
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +++ +KL+D+VIE+ D+RIP S+ +P +D+ N+ R+++LN+ D+
Sbjct: 3 IQWYPGHMTKARRMMQEDIKLIDIVIELVDSRIPFSSKNPDIDELAKNKYRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W Y+ + V N + GMG ++ + + + + R +G++ R +R
Sbjct: 63 ADDAVTTKWENYYKNKDFAVAKINARDGMGMKSINNIVQEACKEKIERDRKRGIINRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN ++ +PGVT+ +W+R GK++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTFINSYARKACTKVGNKPGVTKGKQWIRLGKNIELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+A ++LA I + + D+A L++ L
Sbjct: 183 EAVGLRLAFIGSINDEILSITDIAVELIKFL 213
>gi|15924233|ref|NP_371767.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926826|ref|NP_374359.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
N315]
gi|148267734|ref|YP_001246677.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
JH9]
gi|150393792|ref|YP_001316467.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
JH1]
gi|156979564|ref|YP_001441823.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315601|ref|ZP_04838814.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|255006030|ref|ZP_05144631.2| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257795701|ref|ZP_05644680.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9781]
gi|258415925|ref|ZP_05682195.1| ribosomal biogenesis GTPase [Staphylococcus aureus A9763]
gi|258421687|ref|ZP_05684611.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9719]
gi|258434843|ref|ZP_05688917.1| ribosomal biogenesis GTPase [Staphylococcus aureus A9299]
gi|258444581|ref|ZP_05692910.1| ribosomal biogenesis GTPase [Staphylococcus aureus A8115]
gi|258447586|ref|ZP_05695730.1| ribosomal biogenesis GTPase [Staphylococcus aureus A6300]
gi|258449428|ref|ZP_05697531.1| ribosomal biogenesis GTPase [Staphylococcus aureus A6224]
gi|258454807|ref|ZP_05702771.1| ribosomal biogenesis GTPase [Staphylococcus aureus A5937]
gi|282892731|ref|ZP_06300966.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A8117]
gi|282927585|ref|ZP_06335201.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A10102]
gi|295406178|ref|ZP_06815985.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A8819]
gi|297244406|ref|ZP_06928289.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A8796]
gi|384864470|ref|YP_005749829.1| hypothetical protein ECTR2_1099 [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|387150386|ref|YP_005741950.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus aureus
04-02981]
gi|415691093|ref|ZP_11453332.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
CGS03]
gi|417650895|ref|ZP_12300658.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21172]
gi|417802680|ref|ZP_12449737.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21318]
gi|417892142|ref|ZP_12536196.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21201]
gi|418424383|ref|ZP_12997505.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS1]
gi|418427378|ref|ZP_13000390.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS2]
gi|418430219|ref|ZP_13003135.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS3a]
gi|418433184|ref|ZP_13005961.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS4]
gi|418436855|ref|ZP_13008657.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439727|ref|ZP_13011434.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442779|ref|ZP_13014381.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS7]
gi|418445838|ref|ZP_13017314.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448782|ref|ZP_13020174.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451606|ref|ZP_13022940.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454662|ref|ZP_13025924.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457538|ref|ZP_13028741.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418638136|ref|ZP_13200439.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-3]
gi|418654623|ref|ZP_13216519.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-99]
gi|418661562|ref|ZP_13223147.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-122]
gi|418878092|ref|ZP_13432327.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1165]
gi|418880920|ref|ZP_13435139.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1213]
gi|418883849|ref|ZP_13438044.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1769]
gi|418894942|ref|ZP_13449037.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1057]
gi|418914341|ref|ZP_13468313.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|418920320|ref|ZP_13474253.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC348]
gi|418931313|ref|ZP_13485154.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1750]
gi|418991105|ref|ZP_13538766.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1096]
gi|419785002|ref|ZP_14310760.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-M]
gi|424768073|ref|ZP_18195366.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CM05]
gi|443636965|ref|ZP_21121058.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21236]
gi|13701043|dbj|BAB42338.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247013|dbj|BAB57405.1| similar to GTP-binding protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|147740803|gb|ABQ49101.1| Ras superfamily GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus JH9]
gi|149946244|gb|ABR52180.1| GTP-binding protein HSR1-related [Staphylococcus aureus subsp.
aureus JH1]
gi|156721699|dbj|BAF78116.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|257789673|gb|EEV28013.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9781]
gi|257839261|gb|EEV63735.1| ribosomal biogenesis GTPase [Staphylococcus aureus A9763]
gi|257842373|gb|EEV66798.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A9719]
gi|257849204|gb|EEV73186.1| ribosomal biogenesis GTPase [Staphylococcus aureus A9299]
gi|257850074|gb|EEV74027.1| ribosomal biogenesis GTPase [Staphylococcus aureus A8115]
gi|257853777|gb|EEV76736.1| ribosomal biogenesis GTPase [Staphylococcus aureus A6300]
gi|257857416|gb|EEV80314.1| ribosomal biogenesis GTPase [Staphylococcus aureus A6224]
gi|257863190|gb|EEV85954.1| ribosomal biogenesis GTPase [Staphylococcus aureus A5937]
gi|282590588|gb|EFB95665.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A10102]
gi|282764728|gb|EFC04853.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A8117]
gi|285816925|gb|ADC37412.1| 50S ribosomal subunit maturation GTPase RbgA [Staphylococcus aureus
04-02981]
gi|294968766|gb|EFG44788.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A8819]
gi|297178436|gb|EFH37682.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
A8796]
gi|312829637|emb|CBX34479.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315131037|gb|EFT87021.1| ribosomal biogenesis GTPase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727079|gb|EGG63535.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21172]
gi|334274316|gb|EGL92638.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21318]
gi|341858109|gb|EGS98910.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21201]
gi|375014448|gb|EHS08129.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-99]
gi|375023360|gb|EHS16823.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-3]
gi|375038744|gb|EHS31705.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-122]
gi|377694214|gb|EHT18579.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1165]
gi|377694748|gb|EHT19112.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1057]
gi|377714595|gb|EHT38794.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1750]
gi|377714936|gb|EHT39134.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1769]
gi|377723227|gb|EHT47352.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1096]
gi|377731813|gb|EHT55866.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIG1213]
gi|377757843|gb|EHT81731.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC340D]
gi|377765679|gb|EHT89528.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CIGC348]
gi|383363603|gb|EID40935.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus IS-M]
gi|387718614|gb|EIK06572.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS3a]
gi|387718965|gb|EIK06921.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS2]
gi|387720290|gb|EIK08202.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS1]
gi|387725624|gb|EIK13228.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS4]
gi|387727959|gb|EIK15459.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS5]
gi|387730689|gb|EIK18050.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS6]
gi|387735766|gb|EIK22876.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS8]
gi|387737444|gb|EIK24510.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus VRS7]
gi|387737998|gb|EIK25052.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS9]
gi|387744487|gb|EIK31251.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS10]
gi|387745777|gb|EIK32527.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387747270|gb|EIK33979.1| rbgA, ylqF- ribosomal biogenesis GTPase [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402348710|gb|EJU83689.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus CM05]
gi|408423435|emb|CCJ10846.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408425425|emb|CCJ12812.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408427413|emb|CCJ14776.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408429400|emb|CCJ26565.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408431388|emb|CCJ18703.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408433382|emb|CCJ20667.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408435373|emb|CCJ22633.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|408437358|emb|CCJ24601.1| Ribosome biogenesis GTPase A [Staphylococcus aureus subsp. aureus
ST228]
gi|443406942|gb|ELS65512.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus aureus
subsp. aureus 21236]
Length = 294
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 129/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + + W +F +G + + + G K+ A ++ + ++KGL PRA+R
Sbjct: 63 SNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVSNALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|310641521|ref|YP_003946279.1| GTPase [Paenibacillus polymyxa SC2]
gi|309246471|gb|ADO56038.1| GTPase family protein [Paenibacillus polymyxa SC2]
Length = 289
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +LKL+D+VIE+ DAR+PLS+ +P++D L + R+++LN+ D+
Sbjct: 6 IQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + G G ++ AK L + ++ SKG+ PR +R
Sbjct: 66 ADPVVSQQWIAYFKEQGHVAFPVDATTGTGLKEIPVQAKLLLKEKIDRQISKGMNPRPIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 126 ALIVGIPNVGKSTLINRMAGRNIAATGDRPGVTKAQQWIKTG-EIELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA+ I E +V D+A + L +
Sbjct: 185 QNVGYRLAVTGAIKEEILNVEDIAFFATKYLVQ 217
>gi|392531088|ref|ZP_10278225.1| ribosomal biogenesis GTPase [Carnobacterium maltaromaticum ATCC
35586]
gi|414083721|ref|YP_006992429.1| ribosome biogenesis GTP-binding protein YlqF [Carnobacterium
maltaromaticum LMA28]
gi|412997305|emb|CCO11114.1| ribosome biogenesis GTP-binding protein YlqF [Carnobacterium
maltaromaticum LMA28]
Length = 289
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 129/204 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+D+V E+ DARIPLS+ +P++D+ +G + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKLKLVDIVFELVDARIPLSSRNPILDELIGEKPRVIILNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YF +QG + Q G G + AK L + + RSKG+ PRA+R
Sbjct: 63 ADERQTKAWVNYFKEQGISAVPIVAQEGKGMQNVMSEAKLLLKEKFDRMRSKGINPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+LINR +KR + +PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMSIGIPNVGKSTLINRFIKRNIAKTGNKPGVTKGQQWLKLGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I + + D+A
Sbjct: 183 PEIGKKLALTGAIKDTLLQMDDIA 206
>gi|167040344|ref|YP_001663329.1| HSR1-like GTP-binding protein [Thermoanaerobacter sp. X514]
gi|300914428|ref|ZP_07131744.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
sp. X561]
gi|307724336|ref|YP_003904087.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
sp. X513]
gi|166854584|gb|ABY92993.1| GTP-binding protein, HSR1-related [Thermoanaerobacter sp. X514]
gi|300889363|gb|EFK84509.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
sp. X561]
gi|307581397|gb|ADN54796.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacter
sp. X513]
Length = 277
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DVV E+ DARIP S+ +P +D + N+KR+++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF +G + + N G G +++ + D+ K++ KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKGKGIEAVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPY-FDLLDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + D+ ++A LV +L +
Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKK 212
>gi|375308199|ref|ZP_09773486.1| gtpase family protein [Paenibacillus sp. Aloe-11]
gi|375080530|gb|EHS58751.1| gtpase family protein [Paenibacillus sp. Aloe-11]
Length = 288
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 126/204 (61%), Gaps = 1/204 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +LKL+D+VIE+ DAR+PLS+ +P++D L + R+++LN+ D+
Sbjct: 5 IQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + G G ++ AK L + ++ SKG+ PR +R
Sbjct: 65 ADPVVSQQWIAYFKEQGHVAFQVDATTGTGMKEIPVQAKLLLKEKIDRQISKGMNPRPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 125 ALIVGIPNVGKSTLINRMAGRNIAATGDRPGVTKAQQWIKTG-EIELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q +LA+ I E +V D+A
Sbjct: 184 QNVGYRLAVTGAIKEEILNVEDIA 207
>gi|238926778|ref|ZP_04658538.1| GTP-binding protein [Selenomonas flueggei ATCC 43531]
gi|238885310|gb|EEQ48948.1| GTP-binding protein [Selenomonas flueggei ATCC 43531]
Length = 302
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 117/201 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +++ LK +DVV+E+ DARIP+S+ +P++ + +G + R++VLN+ D+
Sbjct: 19 LQWYPGHMRKAERLVQENLKSVDVVVELLDARIPMSSANPVLREMVGGKPRLIVLNKADL 78
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW Y+A +G + + G GT +L + A K G PRA R
Sbjct: 79 ADENVTRAWVKYYAAEGLSAVPVDAVKGKGTKELVQAIARCAKPKTDKLVQHGAKPRAAR 138
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 139 CMILGIPNVGKSSLINRLSGGTKTKVENRPGVTRAKQWIRLGAQLELLDMPGILWPKFED 198
Query: 280 QAAAIKLAICDDIGERSYDVA 300
Q AA+ LA I + YDV
Sbjct: 199 QQAALHLAFTGAINDNVYDVG 219
>gi|335049776|ref|ZP_08542762.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera sp. UPII
199-6]
gi|333762271|gb|EGL39775.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera sp. UPII
199-6]
Length = 287
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 135/214 (63%), Gaps = 3/214 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK ++ +++ LK++DVV+E+ DARIP S+T+P++ +GN+ ++VLN+ D+
Sbjct: 3 INWYPGHMAKAKRLIQEHLKMIDVVVELVDARIPWSSTNPMIGTLIGNKPSVVVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A+ AW + ++G +V+ N + G KL + + LA+ R +GL R+VR
Sbjct: 63 ADAAEVQAWIQQYEREGRQVVALNSKEGKSGKKLVAVIRRLAAPKLAHWRQRGLKNRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINRL R + A +PG T+ +WV G+ L+ LD+PG++ ++ +
Sbjct: 123 TMILGIPNVGKSTLINRLAGRNVAKTADKPGETKGKQWVHLGEYLDLLDTPGVLWPKLEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +A +LA I S V D +++Q+LA +
Sbjct: 183 QVSAYRLAATGAI---SDTVFDRQTVVLQLLAEL 213
>gi|358060975|ref|ZP_09147663.1| ribosomal biogenesis GTPase [Staphylococcus simiae CCM 7213]
gi|357256550|gb|EHJ06910.1| ribosomal biogenesis GTPase [Staphylococcus simiae CCM 7213]
Length = 294
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F ++G + + + G ++ A + + ++KGL PRA+R
Sbjct: 63 SNLKEMEKWKDFFVEKGYYPVAVDAKHGKNLKQVEAAAIKATKEKFEREKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLANRTIAQTGNKPGVTKQQQWIKVGKLLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|167750815|ref|ZP_02422942.1| hypothetical protein EUBSIR_01797 [Eubacterium siraeum DSM 15702]
gi|167656250|gb|EDS00380.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium siraeum
DSM 15702]
Length = 282
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KT+++++ LKL+D V E+ D+RIP S+ +P++ G++ RI++LN+ D
Sbjct: 7 IQWFPGHMTKTKRQIEADLKLVDAVAEIVDSRIPESSRNPVISDITGSKPRIILLNKCDY 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + + + G G + K L SD+ KR++KG++ +++R
Sbjct: 67 ADEKVTAEWQKYYTAQGYKAMICDCRSGKGVKAFTPNVKNLLSDLLAKRKAKGIVGQSLR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS INR+ K RPGVTR +WV K+LE LD+PGI+ + D
Sbjct: 127 VMVVGIPNVGKSSFINRISKAGKTKVEDRPGVTRGAQWVSLDKELELLDTPGILWPKFDD 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AIKL I + DV ++A L+ L
Sbjct: 187 QQVAIKLGYTGAIKDDVMDVCELADSLLGYL 217
>gi|386040552|ref|YP_005959506.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
gi|343096590|emb|CCC84799.1| GTP-binding protein engA [Paenibacillus polymyxa M1]
Length = 286
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +LKL+D+VIE+ DAR+PLS+ +P++D L + R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + G G ++ AK L + ++ SKG+ PR +R
Sbjct: 63 ADPVVSQQWIAYFKEQGHVAFPVDATTGTGLKEIPVQAKLLLKEKIDRQISKGMNPRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRMAGRNIAATGDRPGVTKAQQWIKTG-EIELLDTPGILWPKFED 181
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA+ I E +V D+A + L +
Sbjct: 182 QNVGYRLAVTGAIKEEILNVEDIAFFATKYLVQ 214
>gi|404329157|ref|ZP_10969605.1| hypothetical protein SvinD2_03639 [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 290
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 125/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+A+ ++E+ ++++ +DVVIE+ D+RIP ++ +PL+D+ + + R+L+LN+ DM
Sbjct: 3 LQWYPGHMARAKREMSEKIRQIDVVIELVDSRIPAASRNPLVDEIVSGKPRLLLLNKTDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F G V N Q G GT ++ L + + KG P R
Sbjct: 63 ADPEATAAWKAHFENNGLTVHLVNSQNGQGTSAIAGSVHRLTAARRKRMEEKGFRPHPDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL +++ A RPGVT +W++ GK +E LD+PGI+ + D
Sbjct: 123 ALILGIPNVGKSTLINRLAGKKIAKIADRPGVTTAQQWIKVGKTMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ LA I E D ++A L++ + R
Sbjct: 183 PKTGMLLAATGAIKEELLDFQEIAFFLIKTMLR 215
>gi|406579906|ref|ZP_11055131.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD4E]
gi|406582129|ref|ZP_11057260.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD3E]
gi|406584370|ref|ZP_11059402.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD2E]
gi|406589226|ref|ZP_11063668.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD1E]
gi|410935906|ref|ZP_11367780.1| ribosome biogenesis GTP-binding protein [Enterococcus sp. GMD5E]
gi|404454845|gb|EKA01745.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD4E]
gi|404458533|gb|EKA04954.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD3E]
gi|404464179|gb|EKA09736.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD2E]
gi|404471195|gb|EKA15747.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus sp.
GMD1E]
gi|410735705|gb|EKQ77612.1| ribosome biogenesis GTP-binding protein [Enterococcus sp. GMD5E]
Length = 307
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 24 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 83
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L AK + + ++G+ PRA+R
Sbjct: 84 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRAIR 143
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 144 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 203
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + A+
Sbjct: 204 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAQ 236
>gi|291530691|emb|CBK96276.1| Ras superfamily GTP-binding protein YlqF [Eubacterium siraeum 70/3]
gi|291557800|emb|CBL34917.1| Ras superfamily GTP-binding protein YlqF [Eubacterium siraeum
V10Sc8a]
Length = 282
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KT+++++ LKL+D V E+ D+RIP S+ +P++ G++ RI++LN+ D
Sbjct: 7 IQWFPGHMTKTKRQIEADLKLVDAVAEIVDSRIPESSRNPVISDITGSKPRIILLNKCDY 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + + + G G + K L SD+ KR++KG++ +++R
Sbjct: 67 ADEKVTAEWQKYYTAQGYKAMICDCRSGKGVKAFTPNVKNLLSDLLAKRKAKGIVGQSLR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS INR+ K RPGVTR +WV K+LE LD+PGI+ + D
Sbjct: 127 VMVVGIPNVGKSSFINRISKAGKTKVEDRPGVTRGAQWVSLDKELELLDTPGILWPKFDD 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AIKL I + DV ++A L+ L
Sbjct: 187 QQVAIKLGYTGAIKDDVMDVCELADNLLGYL 217
>gi|346308009|ref|ZP_08850137.1| ribosome biogenesis GTP-binding protein YlqF [Dorea formicigenerans
4_6_53AFAA]
gi|345904364|gb|EGX74112.1| ribosome biogenesis GTP-binding protein YlqF [Dorea formicigenerans
4_6_53AFAA]
Length = 284
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 126/211 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLIIELVDARVPLSSRNPDIDELGKNKARLIILNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
AW YF K+G V+ N + G G + + + + R +G+L R VRA
Sbjct: 64 EERWNEAWTEYFKKKGFHVVKVNSRKGGGVKSVQSVIQEACKAKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K +E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSLAGKAAAKTGNKPGVTKGKQWIRLNKQVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLA 311
++LA+ I + ++AA L++ LA
Sbjct: 184 TVGLRLALIGSIKDEVLQTEELAAELIRFLA 214
>gi|430825090|ref|ZP_19443300.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0164]
gi|430446482|gb|ELA56154.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus faecium
E0164]
Length = 286
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + + R+++LN+ D+
Sbjct: 3 IQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG + Q G L K + + ++G+ PRA+R
Sbjct: 63 ADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPATKEALKEKRARDAARGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+L+NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 AMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KLA+ I ++ + D+A + AR
Sbjct: 183 EEIGKKLALTGAIKDQLVHLDDLAIYGLDFFAR 215
>gi|166031982|ref|ZP_02234811.1| hypothetical protein DORFOR_01684 [Dorea formicigenerans ATCC
27755]
gi|166028435|gb|EDR47192.1| ribosome biogenesis GTP-binding protein YlqF [Dorea formicigenerans
ATCC 27755]
Length = 284
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 126/211 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLIIELVDARVPLSSRNPDIDELGKNKARLIILNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
AW YF K+G V+ N + G G + + + + R +G+L R VRA
Sbjct: 64 EERWNEAWTEYFKKKGFHVVKVNSRKGGGVKSVQSVIQEACKAKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K +E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSLAGKAAAKTGNKPGVTKGKQWIRLNKQVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLA 311
++LA+ I + ++AA L++ LA
Sbjct: 184 TVGLRLALIGSIKDEVLQTEELAAELIRFLA 214
>gi|251797463|ref|YP_003012194.1| GTP-binding protein HSR1-related [Paenibacillus sp. JDR-2]
gi|247545089|gb|ACT02108.1| GTP-binding protein HSR1-related [Paenibacillus sp. JDR-2]
Length = 296
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 132/212 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + +++++++LKL+D+ IE+ DARIPLS+ +P++D+ LG + R++VLN+ D+
Sbjct: 3 IQWFPGHMTRAKRQIQEKLKLIDIAIELLDARIPLSSRNPMVDEILGGKPRLIVLNKLDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G + + + G + AK + + ++ +KG+ PRA+R
Sbjct: 63 ADPRVTEQWIDYFKYEGHETVAVDSSTGTRVGDIPVKAKEILQEKIDRQLAKGMNPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LINRL R + +PGVT+ +W++ D++ LD+PGI+ + D
Sbjct: 123 GLIVGIPNVGKSTLINRLAGRNIAITGDKPGVTKGQQWIKTTFDMDLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ +LA+ I E+ +V D+A V+ LA
Sbjct: 183 ELVGYRLAMTGAIREQILNVEDIAFFAVRELA 214
>gi|390454093|ref|ZP_10239621.1| GTPase [Paenibacillus peoriae KCTC 3763]
Length = 286
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 126/204 (61%), Gaps = 1/204 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +LKL+D+VIE+ DAR+PLS+ +P++D L + R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + G G ++ AK L + ++ SKG+ PR +R
Sbjct: 63 ADPVVSQQWIAYFKEQGHIAFQVDATTGTGMKEIPVQAKLLLKEKIDRQISKGMNPRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRMAGRNIAATGDRPGVTKAQQWIKTG-EIELLDTPGILWPKFED 181
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q +LA+ I E +V D+A
Sbjct: 182 QNVGYRLAVTGAIKEEILNVEDIA 205
>gi|331091008|ref|ZP_08339850.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405230|gb|EGG84766.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 283
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 127/210 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARIPMSSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF +G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EDRQTDAWAEYFRGKGYSVVKVNSKKGGGIKSIQGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
+KLA I + + ++A L++ L
Sbjct: 184 QVGLKLAFIGSIKDEILNTEELAGELIKFL 213
>gi|210622539|ref|ZP_03293232.1| hypothetical protein CLOHIR_01180 [Clostridium hiranonis DSM 13275]
gi|210154174|gb|EEA85180.1| hypothetical protein CLOHIR_01180 [Clostridium hiranonis DSM 13275]
Length = 297
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 123/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+ +K LKL+DVV+E+ D+RIP S+ +P +D + + R+++LN+ D+
Sbjct: 16 INWYPGHMKKTKDLMKANLKLVDVVVELLDSRIPYSSKNPDIDTLMAGKPRVVLLNKSDI 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A N W Y+ +QG K I + G G ++ K D + KG RA+R
Sbjct: 76 SDRAKLNKWINYYKEQGIKAIPIDAMKGTGVNRIVDECKNAVKDKMDSLKEKGRKERAIR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L RR RPGVT+ +WV+ +LE LD+PGI+ + D
Sbjct: 136 IMIVGVPNVGKSSLINKLTGRRSTQTGDRPGVTKGKQWVKLRGNLELLDTPGILWPKFED 195
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q A+ LA I + DV +A L++ L I
Sbjct: 196 QDVALNLAFTRAIKDEILDVETLALRLIEKLMVI 229
>gi|261408013|ref|YP_003244254.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
Y412MC10]
gi|261284476|gb|ACX66447.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
Y412MC10]
Length = 288
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 127/213 (59%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++++++LKL+D VIE+ DAR+PLS+ +P++D+ L + R++++N+ D+
Sbjct: 3 IQWFPGHMTKARRQIQEKLKLIDAVIELIDARLPLSSRNPMIDEILQGKPRLVIMNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + G + G G + K L + K+ +KG+ PRA+R
Sbjct: 63 ADPEVTRQWQAYFKEAGLTAFPVDASTGTGVKDIPNQIKLLLKEKIDKQIAKGMNPRAMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-GKDLEFLDSPGIIPMRIS 278
IVG PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ +
Sbjct: 123 VLIVGIPNVGKSTLINRLAGRNIAETGDRPGVTKGQQWIKVAGGEMELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
DQ +LA+ I E +V D+A ++ A
Sbjct: 183 DQNVGYRLAVTGAIKEEILNVEDIAFFAIKYFA 215
>gi|125973281|ref|YP_001037191.1| GTP-binding protein YlqF [Clostridium thermocellum ATCC 27405]
gi|256003761|ref|ZP_05428749.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum
DSM 2360]
gi|281417484|ref|ZP_06248504.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum JW20]
gi|385778807|ref|YP_005687972.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum DSM 1313]
gi|419723176|ref|ZP_14250311.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum AD2]
gi|419724920|ref|ZP_14251975.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum YS]
gi|125713506|gb|ABN51998.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum ATCC 27405]
gi|255992322|gb|EEU02416.1| GTP-binding protein HSR1-related protein [Clostridium thermocellum
DSM 2360]
gi|281408886|gb|EFB39144.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum JW20]
gi|316940487|gb|ADU74521.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum DSM 1313]
gi|380771540|gb|EIC05405.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum YS]
gi|380780943|gb|EIC10606.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
thermocellum AD2]
Length = 291
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + L + LK++DVV+E+ DARIP S+ +P +D + N+ +I+VLN+ D+
Sbjct: 3 IQWFPGHMAKTRRILAENLKMVDVVVELLDARIPASSKNPEIDGIVKNKPKIVVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W+ ++ QG IF + G G +L + + D + R +G + R +R
Sbjct: 63 ADEKISNEWSKWYNSQGYATIFIDSIKGTGIKQLKDQMRDIMKDRIERDRQRGRIFRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN++ ++ RPGVTR +W+ +++ +D+PGI+ + D
Sbjct: 123 TMIVGIPNVGKSSLINKIAGKKSAVTGDRPGVTRNKQWINVNNEIQLMDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LA+ I + D ++A+IL++ L++
Sbjct: 183 KTVGINLAVTGAIKDEIIDTVELASILLEHLSK 215
>gi|374323443|ref|YP_005076572.1| GTPase family protein [Paenibacillus terrae HPL-003]
gi|357202452|gb|AET60349.1| gtpase family protein [Paenibacillus terrae HPL-003]
Length = 286
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 129/213 (60%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +LKL+D+VIE+ DAR+PLS+ +P++D L + R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + G G ++ AK L + ++ SKG+ PR +R
Sbjct: 63 ADPVVSQQWIAYFKEQGHIAFQVDATTGTGMKEIPVQAKLLLKEKIDRQISKGMNPRPMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINR+ R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRMAGRSIAATGDRPGVTKAQQWIKTG-EIELLDTPGILWPKFED 181
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA+ I E +V D+A + L +
Sbjct: 182 QNVGYRLAVTGAIKEEILNVEDIAFFATKYLVQ 214
>gi|329924289|ref|ZP_08279444.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
HGF5]
gi|328940771|gb|EGG37086.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus sp.
HGF5]
Length = 288
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 127/213 (59%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++++++LKL+D VIE+ DAR+PLS+ +P++D+ L + R++++N+ D+
Sbjct: 3 IQWFPGHMTKARRQIQEKLKLIDAVIELIDARLPLSSRNPMIDEILQGKPRLVIMNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + G + G G + K L + K+ +KG+ PRA+R
Sbjct: 63 ADPEVTRQWQAYFKEGGLTAFPVDASTGTGVKDIPNQIKLLLKEKIDKQIAKGMNPRAMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-GKDLEFLDSPGIIPMRIS 278
IVG PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ +
Sbjct: 123 VLIVGIPNVGKSTLINRLAGRNIAETGDRPGVTKGQQWIKVAGGEMELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
DQ +LA+ I E +V D+A ++ A
Sbjct: 183 DQNVGYRLAVTGAIKEEILNVEDIAFFAIKYFA 215
>gi|150390502|ref|YP_001320551.1| HSR1-like GTP-binding protein [Alkaliphilus metalliredigens QYMF]
gi|149950364|gb|ABR48892.1| GTP-binding protein, HSR1-related [Alkaliphilus metalliredigens
QYMF]
Length = 285
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ LKDQLKL+DVV E+ DARIP+S+ +P +++ +GN+ R+++LN+ D+
Sbjct: 5 INWYPGHMKKTKELLKDQLKLVDVVYELLDARIPISSRNPSINEIIGNKPRVIILNKFDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YF QG + I N G + + + + KG R +R
Sbjct: 65 ADQEVTNRWVKYFKAQGIEAIPVNCLNSKGLKEAIEEGQKMFQEKKDLMIKKGRKERPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS+IN+L R+ +PGVT+ +W+R ++E LD+PGI+ + D
Sbjct: 125 IMMVGIPNVGKSSIINQLAGRKSARTGDKPGVTKAKQWIRLKGNMELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+KLA I + DV D+A LV+ L
Sbjct: 185 QNVALKLAFTGAIKDEIMDVEDLAFRLVEKL 215
>gi|325661110|ref|ZP_08149737.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 4_1_37FAA]
gi|325472617|gb|EGC75828.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 4_1_37FAA]
Length = 283
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 127/210 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARIPVSSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF ++G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EEKQNDAWAEYFKEKGFSVVKVNSKRGGGIKSIQGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA I + + ++A ++ L
Sbjct: 184 TVGLRLAFIGSIKDEILNTEELAMEMITFL 213
>gi|160892724|ref|ZP_02073514.1| hypothetical protein CLOL250_00254 [Clostridium sp. L2-50]
gi|156865765|gb|EDO59196.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
L2-50]
Length = 285
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +++ +KL+DVVIE+ DAR+P S+ +P +D N+ R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRMMQEDIKLIDVVIELIDARVPYSSKNPDIDALAANKYRLILLNKTDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W Y+ ++G V N + G G +S + K + + R +G++ R +R
Sbjct: 63 ADAAVTAEWEAYYKEKGFFVAKINARSGDGMKNISNVVKEACKEKIERDRKRGIINRPLR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN ++ +PGVT+ +W+R GKD+E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTFINSYARKACTKVGNKPGVTKGKQWIRLGKDIELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ ++LA I + + D+A L++ L
Sbjct: 183 KEVGLRLAFIGSINDEILSITDLAYELIKFL 213
>gi|417907113|ref|ZP_12550889.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
capitis VCU116]
gi|341596744|gb|EGS39335.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
capitis VCU116]
Length = 288
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F +QG + + + G + A + + + KGL PRA+R
Sbjct: 63 TNLKELEKWEGFFKEQGFFPVAVDAKHGKNLKNVEAEAIKATKEKFEREKEKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|331085162|ref|ZP_08334248.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|330407945|gb|EGG87435.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 283
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 127/210 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARIPVSSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF ++G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EEKQNDAWAEYFKEKGFSVVKVNSKRGGGIKSIQGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA I + + ++A ++ L
Sbjct: 184 TVGLRLAFIGSIKDEILNTEELAMEMITFL 213
>gi|225568159|ref|ZP_03777184.1| hypothetical protein CLOHYLEM_04233 [Clostridium hylemonae DSM
15053]
gi|225163112|gb|EEG75731.1| hypothetical protein CLOHYLEM_04233 [Clostridium hylemonae DSM
15053]
Length = 282
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 129/217 (59%), Gaps = 1/217 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARIPQSSRNPDIDELGKNKARLILLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF K+G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EEKWNDAWAEYFRKKGFSVVKVNSKKGGGMKSIHGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R + +E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSLAGKSCTKTGNKPGVTKGKQWIRLNRQVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQ-MLARIPTV 316
+KLA I + ++AA L++ ML P V
Sbjct: 184 QVGLKLAFVGSIKDEVLQTEELAAELIRFMLDHYPGV 220
>gi|291550684|emb|CBL26946.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus torques
L2-14]
Length = 282
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 125/210 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K + +++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKARRMMQENIKLIDLIIELVDARVPLSSRNPDIDELGKNKARLILLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ W YF KQG V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EDRRNDEWMEYFKKQGYSVVKVNSKKGGGIKSIQSVIQEACKEKMERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA I + ++A+ LV+ L
Sbjct: 184 TVGLRLAFIGSIKDEILQTEELASELVKFL 213
>gi|314933424|ref|ZP_07840789.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus caprae
C87]
gi|313653574|gb|EFS17331.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus caprae
C87]
Length = 288
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 128/204 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F +QG + + + G + A + + + KGL PRA+R
Sbjct: 63 TNLKELEKWEGFFKEQGFFPVAVDAKHGKNLKNVEAEAIKATKEKFEREKEKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L KR + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ KL++ I + + +VA
Sbjct: 183 EEVGKKLSLTGAIKDSIVHLDEVA 206
>gi|357038748|ref|ZP_09100545.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
gibsoniae DSM 7213]
gi|355359540|gb|EHG07302.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
gibsoniae DSM 7213]
Length = 282
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++ L+++DVVIE+ DARIP S+ +P ++ L ++ R++VLN+ D+
Sbjct: 3 IQWYPGHMAKARRQVQQNLQMVDVVIELLDARIPASSRNPDINAILKDKPRLVVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G + + G G K+ L + LA K ++G L R R
Sbjct: 63 ADPEITAVWLDYFTSKGLPAVAVDAHHGAGVKKMVALTERLAQPAIKKYMARGRLARLAR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS LINRL ++ RPGVTR +W++ G LE LD+PGI+ + D
Sbjct: 123 CMVVGVPNVGKSMLINRLAGKKAARTGNRPGVTRGEQWIKLGGKLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A KLA+ I E+ Y+ ++ LVQ L
Sbjct: 183 PETAYKLAVTGAIKEQIYNPEEICTKLVQWL 213
>gi|225028007|ref|ZP_03717199.1| hypothetical protein EUBHAL_02276 [Eubacterium hallii DSM 3353]
gi|224954721|gb|EEG35930.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium hallii
DSM 3353]
Length = 282
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 123/212 (58%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K + +++ +KL+D+V+E+ DAR+P S+ +P +D+ N+ R++VLN+ DM
Sbjct: 4 QWYPGHMTKARRMMQENIKLIDIVVELVDARVPFSSKNPDIDELAKNKYRLIVLNKADMA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
AW YF +G V N Q G G ++ L + + + + +G+L R +RA
Sbjct: 64 DAKTTAAWQNYFEAKGFFVAKVNSQKGAGMKEVKSLIEKACQEKKARDKKRGILNRPLRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W++ K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGKQWIKINKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
A ++LA+ I E + ++A + L +
Sbjct: 184 AVGLRLALIGSIKEEILNTTEMAMEFIGFLKK 215
>gi|256750723|ref|ZP_05491608.1| GTP-binding protein HSR1-related protein [Thermoanaerobacter
ethanolicus CCSD1]
gi|256750306|gb|EEU63325.1| GTP-binding protein HSR1-related protein [Thermoanaerobacter
ethanolicus CCSD1]
Length = 277
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DVV E+ DARIP S+ +P +D + N+KR+++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F +G + + N G G +++ K + D+ +++ KG++PR +R
Sbjct: 62 ADDVITDLWIEFFKGKGIEAVKVNSITGFGLKEINEATKRVCQDILERKKQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GIIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRTLHWIKTPY-FDLLDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + D+ ++A LV +L +
Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKK 212
>gi|297584020|ref|YP_003699800.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus
selenitireducens MLS10]
gi|297142477|gb|ADH99234.1| ribosome biogenesis GTP-binding protein YlqF [Bacillus
selenitireducens MLS10]
Length = 285
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++++++K +DVVIEV DAR PL++ +PL+D+ ++ R+++LN+ D+
Sbjct: 3 IQWYPGHMAKARRQVQEKIKQIDVVIEVCDARAPLASRNPLVDEMTRSKPRLMLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
WA YF KQG V+ + Q G G + LA + K K + PR +R
Sbjct: 63 ADPEMNRKWADYFEKQGDAVLIVDAQKGKGIKDIPGKVNELAKPLYEKWARKKVNPRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PN GKS++INRL +R+ +PGVT+ +W++ + L+ LD+PGI+ + D
Sbjct: 123 ALIIGIPNAGKSTVINRLAGKRITKIGDKPGVTKAQQWIKVDRQLDLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
LA+ I E +D + A L++ L++
Sbjct: 183 PHVGQMLALTGAIKEEIFDYEESAVYLLRFLSQ 215
>gi|160880533|ref|YP_001559501.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg]
gi|160429199|gb|ABX42762.1| GTP-binding protein HSR1-related [Clostridium phytofermentans ISDg]
Length = 292
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 126/213 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+DVVIE+ DARIP S+ +P +D N+ RI++LN+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDVVIELVDARIPYSSKNPDIDDLAKNKSRIILLNKYDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AW +Y+ K+G V N + G G + + K + + R +G+L R +RA
Sbjct: 64 DQKMTDAWKSYYEKKGWFVALVNSRNGSGVKNVHEVIKQACQEKIERDRKRGILNRPIRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
IVG PNVGKS+ IN + +PGVT+ +W++ K++E LD+PGI+ + DQ
Sbjct: 124 MIVGIPNVGKSTFINSFAGKACTKTGNKPGVTKGKQWIKLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+++A I + + D+ L++ L R+
Sbjct: 184 VVGMRIAFIGSINDDILNPRDLCYELIEYLHRV 216
>gi|290968506|ref|ZP_06560045.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera genomosp.
type_1 str. 28L]
gi|290781502|gb|EFD94091.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera genomosp.
type_1 str. 28L]
Length = 287
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 134/214 (62%), Gaps = 3/214 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK ++ +++ LKL+DVV+E+ DARIP S+T+P++ +GN+ ++VLN+ D+
Sbjct: 3 INWYPGHMAKAKRLIQEHLKLIDVVVELVDARIPWSSTNPMIGTLIGNKPSVVVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A+ AW + ++G +V+ N + G KL + + A+ R +GL R+VR
Sbjct: 63 ADAAEVRAWIQQYEREGRQVVALNSKEGKSGKKLVAVIRQSAAPKLAHWRQRGLKNRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINRL R + A +PG T+ +WV G+ L+ LD+PG++ ++ +
Sbjct: 123 TMILGIPNVGKSTLINRLAGRNVAKTADKPGETKGKQWVHLGEYLDLLDTPGVLWPKLEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +A +LA I S V D +++Q+LA +
Sbjct: 183 QVSAYRLAATGAI---SDTVFDRQTVVLQLLAEL 213
>gi|392940892|ref|ZP_10306536.1| LOW QUALITY PROTEIN: ribosome biogenesis GTP-binding protein YlqF
[Thermoanaerobacter siderophilus SR4]
gi|392292642|gb|EIW01086.1| LOW QUALITY PROTEIN: ribosome biogenesis GTP-binding protein YlqF
[Thermoanaerobacter siderophilus SR4]
Length = 277
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK++KE+ LKL+DVV E+ DARIP S+ +P +D + +KRI++LN+ D+
Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKIKKRIILLNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF ++G + + N G G +++ + + D+ K++ KG++PR +R
Sbjct: 62 ADDVITDLWIEYFKEKGIEAVKVNSITGFGLKEINEATQRVCQDILDKKKQKGMIPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN+L+ + +PGVTR L W++ + LD+PGI+ + D
Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKTPY-FDLLDTPGILWPKFDD 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ I LAI I + D+ ++A LV +L +
Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKK 212
>gi|345019909|ref|ZP_08783522.1| hypothetical protein OTW25_01110 [Ornithinibacillus scapharcae
TW25]
Length = 282
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E++++LKL+D V+E+ DAR PLS+ +P++ Q L N+ ++++L + D+
Sbjct: 3 IQWFPGHMAKARREIEEKLKLVDFVMELVDARAPLSSQNPMLQQVLQNKSKMILLMKRDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N W YF ++ + N K+ +LAK L K KG+ PRA R
Sbjct: 63 ADVQVTNEWIKYFQERDIPALAVNVNDKSDVNKVIQLAKELGQKKLDKLIQKGIQPRASR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL +++ RPGVT+ W++ K+ E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINRLANKKIAKVGDRPGVTKQQLWIKVKKEFELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +LA I ++ + D+ +++ L
Sbjct: 183 QTVGYRLAAIGTIKDQLLSLQDIVVFVIRYL 213
>gi|375088583|ref|ZP_09734921.1| ribosome biogenesis GTP-binding protein YlqF [Dolosigranulum pigrum
ATCC 51524]
gi|374561548|gb|EHR32887.1| ribosome biogenesis GTP-binding protein YlqF [Dolosigranulum pigrum
ATCC 51524]
Length = 290
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 124/208 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E +++LKL+DVV E+ DARIPLS+++P +D+ +G++ R+ +L + D+
Sbjct: 3 IQWFPGHMAKATREFQEKLKLVDVVFELLDARIPLSSSNPSLDEIIGDKPRVKILMKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W TY+ + V+ N + + A + ++ KR KGL PRA+R
Sbjct: 63 ADAQITSQWLTYYKENNIAVVPYNAKRNQDVSPILAAADDVLTEYKQKRIDKGLRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+LINR + + RPGVT+ +W+++ LE LD+PGI+ + D
Sbjct: 123 AVSVGIPNVGKSTLINRFAGKNIAQTGNRPGVTKAQQWIKYKNKLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILV 307
Q LA+ I + + DVA ++
Sbjct: 183 QRVGKCLAVTGAIKDTLLHLDDVALFMM 210
>gi|336432668|ref|ZP_08612499.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 2_1_58FAA]
gi|336017950|gb|EGN47703.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 264
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 128/212 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DAR+P+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARLPVSSRNPDIDELGKNKARLILLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF K+G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EEKWNDAWAEYFKKKGYSVVKVNSKRGGGIKSIQGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
++LA I + + ++ L++ L +
Sbjct: 184 TVGLRLAFIGSIKDEILNTEELGGELIRFLVQ 215
>gi|373494759|ref|ZP_09585358.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium infirmum
F0142]
gi|371967803|gb|EHO85271.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium infirmum
F0142]
Length = 280
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 4/215 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
SL+ + WYPGH+ KT + + LKL+D+VIEV DARIP+S+ +P++D+ ++RI++LN
Sbjct: 2 SLQNINWYPGHMKKTRELITSNLKLVDIVIEVIDARIPVSSRNPVIDELTAGKQRIIILN 61
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ D+ + W G KV+ + G+G +L L + D+N R K
Sbjct: 62 KSDLADGNETKRWMEKLGTDGIKVMTLDSMHGVGIKELLNLMTKIQDDINKDRVRK---- 117
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+ +R IVG PNVGKSSLINRL ++ +PGVT+ +W+ ++ LD+PGI+
Sbjct: 118 KNLRLMIVGVPNVGKSSLINRLTGKKSAKTGDKPGVTKGKQWLTLSNGMQLLDTPGILWP 177
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ D++ IKLA C I + D+ +A L+++L
Sbjct: 178 KFEDESVGIKLAFCGSIKDEILDLETLALRLIELL 212
>gi|89098663|ref|ZP_01171545.1| GTPase family protein [Bacillus sp. NRRL B-14911]
gi|89086625|gb|EAR65744.1| GTPase family protein [Bacillus sp. NRRL B-14911]
Length = 281
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 130/206 (63%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+AK +++ ++LKL+D++ E+ DAR+P S+ +P++D+ + ++ R+++LN+ DM
Sbjct: 1 MAKARRQVTEKLKLVDIIFELVDARLPQSSRNPMIDEIIQHKPRLVLLNKADMADKEATK 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
AW YF+ +G K + N Q G G +S A+ + + + R+KG+ PRA+R IVG P
Sbjct: 61 AWIRYFSDRGIKALAINSQAGSGMKDISSAAQEILKEKFDRMRAKGVKPRAIRGMIVGIP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+LINRL K+ + PGVT+ +W++ GK++E LD+PGI+ + DQ +KL
Sbjct: 121 NVGKSTLINRLAKKNIAKTGNMPGVTKAQQWIKAGKEMELLDTPGILWPKFEDQEVGLKL 180
Query: 287 AICDDIGERSYDVADVAAILVQMLAR 312
A+ I + ++ D+A ++ L +
Sbjct: 181 ALSGAIKDTILNLHDIAIYALKFLEK 206
>gi|154503289|ref|ZP_02040349.1| hypothetical protein RUMGNA_01113 [Ruminococcus gnavus ATCC 29149]
gi|153795956|gb|EDN78376.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus gnavus
ATCC 29149]
Length = 288
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 128/212 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DAR+P+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARLPVSSRNPDIDELGKNKARLILLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+AWA YF K+G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EEKWNDAWAEYFKKKGYSVVKVNSKRGGGIKSIQGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
++LA I + + ++ L++ L +
Sbjct: 184 TVGLRLAFIGSIKDEILNTEELGGELIRFLVQ 215
>gi|167758981|ref|ZP_02431108.1| hypothetical protein CLOSCI_01327 [Clostridium scindens ATCC 35704]
gi|336422972|ref|ZP_08603111.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 5_1_57FAA]
gi|167663388|gb|EDS07518.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium scindens
ATCC 35704]
gi|336006818|gb|EGN36850.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 5_1_57FAA]
Length = 282
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 1/218 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 3 FQWYPGHMTKAKRMMQENIKLIDLVIELVDARIPVSSRNPDIDELGKNKSRMILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+AWA YF ++G V+ N + G G + + + + + R +G+L R VR
Sbjct: 63 AEDKWNDAWAEYFREKGFFVVKLNSKKGGGLKSIQGVIQEACKEKMERDRKRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN L + +PGVT+ +W+R K +E LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKQVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML-ARIPTV 316
Q ++LA I + + ++AA L++ L A P V
Sbjct: 183 QKVGLRLAFIGSIKDEILNTEELAAELIKFLNANYPGV 220
>gi|228475017|ref|ZP_04059745.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
hominis SK119]
gi|418620398|ref|ZP_13183202.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
hominis VCU122]
gi|228271002|gb|EEK12390.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
hominis SK119]
gi|374822528|gb|EHR86548.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
hominis VCU122]
Length = 294
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F +G + + + G + A + K ++KGL PRA+R
Sbjct: 63 SNLNEMQKWEHFFTDKGFYPVAVDAKHGKNLKGVENAAIEATKEKFEKEKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKKNIAQTGNKPGVTKQQQWIKVGKALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KL++ I + + +VA +Q L +
Sbjct: 183 ETVGKKLSLTGAIKDSIVHLDEVAIYGLQFLIK 215
>gi|314936594|ref|ZP_07843941.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
hominis subsp. hominis C80]
gi|313655213|gb|EFS18958.1| ribosome biogenesis GTP-binding protein YlqF [Staphylococcus
hominis subsp. hominis C80]
Length = 294
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 131/213 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D + + R+++LN++DM
Sbjct: 3 IQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ + W +F +G + + + G + A + K ++KGL PRA+R
Sbjct: 63 SNLNEMQKWEYFFTDKGFYPVAVDAKHGKNLKGVENAAIEATKEKFEKEKAKGLKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L K+ + +PGVT+ +W++ GK L+ LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTLINKLAKKNIAQTGNKPGVTKQQQWIKVGKALQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KL++ I + + +VA +Q L +
Sbjct: 183 ETVGKKLSLTGAIKDSIVHLDEVAIYGLQFLIK 215
>gi|153812957|ref|ZP_01965625.1| hypothetical protein RUMOBE_03364 [Ruminococcus obeum ATCC 29174]
gi|149830904|gb|EDM85994.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus obeum
ATCC 29174]
Length = 285
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYPGH+ K ++++++ LKL+D++IE+ DAR+PLS+ +P +DQ N+ R+++LN+ D+
Sbjct: 3 VQWYPGHMTKAKRQMQEDLKLIDLIIELVDARVPLSSRNPDIDQLGQNKSRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YF K+G V+ + + G G + + + + + R +G+ R +R
Sbjct: 63 ADERQNEAWKEYFQKRGFHVVKVDSRNGSGMKTIQNVIQEACKEKIERDRRRGIKNRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+ IN + RPGVT+ +W+R K++E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTFINTFAGKACAKTGNRPGVTKGKQWIRLNKNVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q I+LA I + ++ ++A L++ L
Sbjct: 183 QQVGIRLACVGSIKDDILNMEELALWLIEHL 213
>gi|326204814|ref|ZP_08194668.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
papyrosolvens DSM 2782]
gi|325985026|gb|EGD45868.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
papyrosolvens DSM 2782]
Length = 292
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 124/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + + + LKL+DV+IE+ DARIP S+ +P ++ + N+ R++ N+ D+
Sbjct: 3 IQWFPGHMAKTRRLIAENLKLVDVIIELLDARIPFSSRNPEINSLINNKPRLIAFNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++A+QG I N G G ++ A+ L S+ + ++KG L VR
Sbjct: 63 ADDRISRQWIKWYAEQGIDCILINSINGKGLNEIKARARELMSEKIERNKAKGKLFTPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN+++ R RPGVTR +W+R ++E LD+PGI+ + D
Sbjct: 123 TMVVGIPNVGKSSFINKIVGRATAVTGDRPGVTRGKQWIRINSEIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q + LA I + D +VA L+ L++
Sbjct: 183 QEVGMNLAFTGAIKDDIMDTGEVAMELLHRLSK 215
>gi|197303273|ref|ZP_03168314.1| hypothetical protein RUMLAC_01996 [Ruminococcus lactaris ATCC
29176]
gi|197297699|gb|EDY32258.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus lactaris
ATCC 29176]
Length = 282
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 125/212 (58%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K + +++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKARRMMQENIKLIDLIIELVDARVPLSSRNPDIDELGKNKARLILLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ W YF ++G + N + G G + + + + + R +G+L R VRA
Sbjct: 64 EDRRNDEWLEYFKEKGYSAVKVNSRKGGGIKSIQNVIQEACKEKMERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSLAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
A +KLA I + ++A+ LV + R
Sbjct: 184 AVGLKLAFIGSIKDEILQTEELASELVDFINR 215
>gi|296133540|ref|YP_003640787.1| ribosome biogenesis GTP-binding protein YlqF [Thermincola potens
JR]
gi|296032118|gb|ADG82886.1| ribosome biogenesis GTP-binding protein YlqF [Thermincola potens
JR]
Length = 286
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K +K +++ LK++D+VIE+ DARIP S+ +P + + L + R++ LN+ D+
Sbjct: 7 IQWFPGHMVKAKKMVRENLKIVDIVIELVDARIPSSSRNPDLQEILQGKPRVVALNKADL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F + G + N G G KL L K V K +KG PR +R
Sbjct: 67 ADQNLTERWTQVFTRDGCNAVAINSTTGQGVEKLVALTKKAGEPVMQKLAAKGRKPRPIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLIN+L + RPGVTR +W+R G+D+E LD+PGI+ + D
Sbjct: 127 VMILGIPNVGKSSLINKLAGKGATRTGDRPGVTRGKQWIRVGRDMELLDTPGILWPKFDD 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I E +V V L++ L
Sbjct: 187 PEVGFKLAVTGAIKEEVINVEQVVLKLLKYL 217
>gi|427392628|ref|ZP_18886633.1| ribosome biogenesis GTP-binding protein YlqF [Alloiococcus otitis
ATCC 51267]
gi|425731138|gb|EKU93959.1| ribosome biogenesis GTP-binding protein YlqF [Alloiococcus otitis
ATCC 51267]
Length = 281
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 126/204 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E +++LKL+D+V+E+ DAR+P S+++P++DQ + ++ R+ +L + D+
Sbjct: 4 IQWYPGHMAKAKREFQEKLKLVDIVLELLDARLPESSSNPMLDQIIQDKPRLKILMKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ QG + N + ++ K + SD +R++KGL RAV+
Sbjct: 64 ADQKRTNQWLNYYQDQGKPAMALNVKHKQDMKDVTDQIKVVLSDWQKQRQAKGLNQRAVK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+LINR + + RPGVT+ +W+++ LE LD+PGI+ + D
Sbjct: 124 AVSVGIPNVGKSTLINRFAGKNIAQTGNRPGVTQAQQWIKYKGVLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I ++ + D+A
Sbjct: 184 QEVGKKLALTGAIKDKLLYMDDIA 207
>gi|315648160|ref|ZP_07901261.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus vortex
V453]
gi|315276806|gb|EFU40149.1| ribosome biogenesis GTP-binding protein YlqF [Paenibacillus vortex
V453]
Length = 288
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 126/213 (59%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++++++LKL+D VIE+ DAR+PLS+ +P++D+ L + R++++N+ D+
Sbjct: 3 IQWFPGHMTKARRQIQEKLKLIDAVIELIDARLPLSSRNPMIDEILQGKPRLIIMNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + + G G + K L + K+ +KG+ PRA+R
Sbjct: 63 ADPEVTRQWQAYFKENSLTAFPVDASTGTGIKDIPNQIKLLLKEKIDKQIAKGMNPRAMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-GKDLEFLDSPGIIPMRIS 278
IVG PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ +
Sbjct: 123 VLIVGIPNVGKSTLINRLAGRNIAETGDRPGVTKGQQWIKVAGGEMELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
DQ +LA+ I E +V D+A ++ +
Sbjct: 183 DQNVGYRLAVTGAIKEEILNVEDIAYFAIKYFS 215
>gi|358064079|ref|ZP_09150668.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium hathewayi
WAL-18680]
gi|356697712|gb|EHI59283.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium hathewayi
WAL-18680]
Length = 283
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D++IEV DAR+P S+ +P +D+ N+ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLIIEVVDARVPFSSRNPDIDELGQNKARIVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ +AWA +F Q VI N + G G +++ + + + + R +G+L R VR
Sbjct: 63 SNERWNDAWAEWFKSQDCHVIKVNSRSGAGLKQINSVVQEACKEKIERDRRRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ R +
Sbjct: 123 AMVVGIPNVGKSTFINSFAGKACTKTGNKPGVTKGNQWIRLNKSLELLDTPGILWPRFEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q + LA I + + ++A L++ +
Sbjct: 183 QEVGLHLAFIGSINDEILNKEEMAVELLKFM 213
>gi|308068633|ref|YP_003870238.1| GTPase [Paenibacillus polymyxa E681]
gi|305857912|gb|ADM69700.1| Predicted GTPase [Paenibacillus polymyxa E681]
Length = 299
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 128/213 (60%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +LKL+D+VIE+ DAR+PLS+ +P++D L + R+++LN+ D+
Sbjct: 16 IQWFPGHMTRARRQIEAKLKLIDLVIELIDARLPLSSRNPMIDDILQGKPRMIILNKADL 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + + G G ++ AK L + ++ KG+ PR +R
Sbjct: 76 ADPVVSQQWIAYFKEQGHVALPVDATTGTGLKEIPIQAKLLLKEKIDRQIRKGMNPRPMR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LINR+ R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 136 GLIVGIPNVGKSTLINRMAGRNIAATGDRPGVTKAQQWIKIG-EIELLDTPGILWPKFED 194
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +LA+ I E +V D+A + L +
Sbjct: 195 QNVGYRLAVTGAIKEEILNVEDIAFFATKYLVQ 227
>gi|225374457|ref|ZP_03751678.1| hypothetical protein ROSEINA2194_00072 [Roseburia inulinivorans DSM
16841]
gi|225213695|gb|EEG96049.1| hypothetical protein ROSEINA2194_00072 [Roseburia inulinivorans DSM
16841]
Length = 284
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 128/212 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLSSRNPDIDELGKNKARLIIMNKSDLS 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
WA YF K G V+ + + G ++ + + + R +G+L R VRA
Sbjct: 64 DENQNKEWAAYFKKMGCYVVGLDARTKAGMKTVTNVVMEACKEKIERDRRRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K+LE LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSYAGKACAKTGNKPGVTKGKQWIRLNKNLELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
++LA+ I + ++ +++ L+++L R
Sbjct: 184 MVGLRLALIGAIKDEILNIDELSLELIKVLTR 215
>gi|154483563|ref|ZP_02026011.1| hypothetical protein EUBVEN_01267 [Eubacterium ventriosum ATCC
27560]
gi|149735473|gb|EDM51359.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium
ventriosum ATCC 27560]
Length = 291
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 125/212 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ K +++K+ +KL+D+VIE+ DARIPLS+ +P +D N+ R+++LN+ D+
Sbjct: 15 INWYPGHMTKAVRQMKEDIKLIDLVIELLDARIPLSSRNPDIDDLGKNKARLVLLNKSDL 74
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
D N W YF +G + N + G +++ + + + + +G++ R VR
Sbjct: 75 ADETDNNKWIQYFKDKGIIALKINSKNKQGIKEINNAVQIACKEKIERDKKRGIINRPVR 134
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN R +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 135 AMVVGIPNVGKSTFINAYAGRAAAKTGNKPGVTKGKQWIKLNKNLELLDTPGILWPKFDN 194
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q + LA I + DV ++A LV++LA
Sbjct: 195 QTIGMHLAFIGSINDNILDVTELAYQLVKLLA 226
>gi|403378827|ref|ZP_10920884.1| protein RbgA [Paenibacillus sp. JC66]
Length = 286
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 130/216 (60%), Gaps = 1/216 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++ +L ++D+ IE+ DARIPL++ +P++D L + R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIEAKLNIIDMAIELMDARIPLASRNPMIDDILQRKPRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++F +QG + + + G ++ KAL +D + KG+ PR +R
Sbjct: 63 ADAQVTARWVSFFQEQGIEALPVDSVSGTRVKEIVPACKALLADKIEAQIRKGMKPRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LINRL R+ RPGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINRLAGRKAAITGDRPGVTKGQQWIRIGGELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ-MLARIP 314
Q I+LA I + D+A ++++ ML P
Sbjct: 183 QQVGIRLAATGAIKDELLHQQDIAFVIIRDMLGTYP 218
>gi|408789568|ref|ZP_11201223.1| 50S ribosomal subunit maturation GTPase RbgA ( YlqF) [Lactobacillus
florum 2F]
gi|408521174|gb|EKK21160.1| 50S ribosomal subunit maturation GTPase RbgA ( YlqF) [Lactobacillus
florum 2F]
Length = 289
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AK ++ ++ +K++DVV E+ DARIP+S+ +P + + N+ R+L+L + D+
Sbjct: 5 INWFPGHMAKAIRQFEENIKVVDVVFEILDARIPISSINPEITRISRNKPRLLILTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG I + + K+ + AK L ++ ++++KG P+ ++
Sbjct: 65 ADPQLTKQWLLWFQKQGQAAITIDAKTPGVQKKVEQAAKRLLANKLSQQQAKGFSPQKIK 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N+L+ RR P RPGVT+ +W+ LE LD+PGI+ + +D
Sbjct: 125 AICVGVPNVGKSTLLNQLINRRSAPVGNRPGVTKGQQWLTGNGHLELLDTPGILWPKFAD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q A KLA+ I ER+Y DVA +Q +
Sbjct: 185 QRVAEKLALTGAIRERAYHSDDVALFAIQFFKQ 217
>gi|283768288|ref|ZP_06341200.1| ribosome biogenesis GTP-binding protein YlqF [Bulleidia extructa
W1219]
gi|283104680|gb|EFC06052.1| ribosome biogenesis GTP-binding protein YlqF [Bulleidia extructa
W1219]
Length = 286
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 122/205 (59%), Gaps = 1/205 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +E+ +++K++D+VIE RDARIPL++ +PL+DQ +G + R+++L + D+
Sbjct: 4 IQWYPGHMEKARREMSEKVKVVDMVIECRDARIPLASKNPLIDQLIGQKPRLILLTKIDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMK-LSRLAKALASDVNVKRRSKGLLPRAV 218
W YF ++ K I N + G G K + L K+RS+G+ PR +
Sbjct: 64 ADPIKIKEWIRYFDRENQKAIAVNMKKGQGFQKEIVSACLKLNQKKRDKQRSRGIEPRPI 123
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA + G PNVGKS+LINR+ + A RPGVTR L W+ ++L+ LD+PG++ +
Sbjct: 124 RAMVCGIPNVGKSTLINRISGKNRLEVANRPGVTRSLTWLHADRELDLLDTPGVLWPKFE 183
Query: 279 DQAAAIKLAICDDIGERSYDVADVA 303
DQ LA+ I E D +A
Sbjct: 184 DQRVGSLLAVLGSINEDILDQKFIA 208
>gi|304436822|ref|ZP_07396788.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. oral
taxon 149 str. 67H29BP]
gi|304370194|gb|EFM23853.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. oral
taxon 149 str. 67H29BP]
Length = 296
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 116/201 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K E+ +++ LK +DVV+E+ DARIP+S+ +P++ + +G + R++VLN+ D+
Sbjct: 13 LQWYPGHMRKAERLVQENLKSVDVVVELLDARIPMSSANPVLREIVGGKPRLIVLNKADL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW Y+A + + + G GT +L + A K G PRA R
Sbjct: 73 ADEYVTRAWVKYYAAEWLSAVPVDAVKGKGTKELVQAIARCAKPKTDKLVQHGAKPRAAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL RPGVTR +W+R G LE LD PGI+ + D
Sbjct: 133 CMILGIPNVGKSSLINRLSGGTKTKVENRPGVTRAKQWIRLGAQLELLDMPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVA 300
Q AA+ LA I + YDV
Sbjct: 193 QQAALHLAFTGAINDNVYDVG 213
>gi|336430713|ref|ZP_08610652.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336016806|gb|EGN46582.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 279
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 124/210 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K + +++ +KL+D++IE+ DARIPLS+ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKARRAMQEDIKLIDLIIELVDARIPLSSRNPDIDELGRNKARLVLMNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
A AW +F +QG K + N Q G G + + + + + R +G+L R VRA
Sbjct: 64 DPACNRAWTAWFQEQGIKSLEINAQSGQGMKAIQGAVQEVCREKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSFAGKACTKTGNKPGVTKGKQWIRLNKGLELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +KLA + + + ++A L+ L
Sbjct: 184 SVGMKLAFIGSMNDEIIIMDELAVDLISFL 213
>gi|336436401|ref|ZP_08616113.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007266|gb|EGN37291.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 282
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 126/210 (60%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DAR+P+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENMKLIDLVIELVDARVPVSSRNPDLDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ WA YF ++G V+ N + G G + + + + + R +G+L R VRA
Sbjct: 64 EERMNDVWAAYFKEKGYSVVKLNAKKGGGIKSIQGVIQEACKEKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA I + + ++AA L L
Sbjct: 184 TVGLRLAWIGSIKDEILNTEELAAELTGFL 213
>gi|354807458|ref|ZP_09040925.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
curvatus CRL 705]
gi|354514040|gb|EHE86020.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
curvatus CRL 705]
Length = 282
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 127/203 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +K++K++LK +D+++E+ DAR+P S+ +P++ + N+ +L++N+ DM
Sbjct: 3 IQWYPGHMAKAQKQIKERLKAVDLILEIVDARVPESSINPMIAELGQNKPTLLIMNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F K+G I + Q ++ ++A+ + +D K+R+KG+L +R
Sbjct: 63 ADAKRTQQWIETFKKRGITAIALDAQHKSKLPQIEKVAQEILADKLAKKRAKGILNPVIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+++NRL+++ + RPGVT+ +W++ G+ LE LD+PG++ + D
Sbjct: 123 AMCVGVPNVGKSTILNRLVQKNIAVTGNRPGVTKNQQWLKAGQSLELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADV 302
A KLA+ I + Y DV
Sbjct: 183 PAVGNKLALTGAISDAIYHPDDV 205
>gi|227824784|ref|ZP_03989616.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|352683803|ref|YP_004895787.1| hypothetical protein Acin_0404 [Acidaminococcus intestini RyC-MR95]
gi|226905283|gb|EEH91201.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|350278457|gb|AEQ21647.1| conserved hypothetical protein [Acidaminococcus intestini RyC-MR95]
Length = 290
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 124/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K +++++ +L+++DVV+E+ DARIP ++ +PL+ +G++ +I+ LN+ DM
Sbjct: 12 IQWFPGHMTKAKRQMESELRMVDVVVELLDARIPRASANPLLKGLIGSKVKIVALNKTDM 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW TYF + G K + + Q G G L + V K KG+ +R
Sbjct: 72 ADPLATKAWLTYFKEAGLKALEVDCQKGRGVKALLTAMREAGQPVIDKWLKKGVRNHPIR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LINR+L + A RPGVTR +WV GK+LE LD+PG++ +
Sbjct: 132 IMIVGIPNVGKSTLINRILGKNKAAAQNRPGVTRNTQWVEIGKNLELLDTPGVLWPKFEK 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
LA+ I E +D A+IL+ L +
Sbjct: 192 VETGFHLAVTGAIKEDVFDREMAASILLLRLKK 224
>gi|253578397|ref|ZP_04855669.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850715|gb|EES78673.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 283
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYPGH+ K ++++++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 5 VQWYPGHMTKAKRQMQEDIKLIDLIIELVDARVPLSSRNPDIDELGKNKSRLILLNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW TYF +G V+ + + G G ++ + + + + R +G+ R +R
Sbjct: 65 ADERQNEAWKTYFQAKGFYVVKVDSRNGSGMKAINNVIQEACKEKIERDRRRGIKNRPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN R +PGVT+ +W+R K +E LD+PGI+ + D
Sbjct: 125 AMVVGIPNVGKSTFINTFAGRACAKTGNKPGVTKGKQWIRLNKGVELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q I+LA I + ++ ++A L+ L
Sbjct: 185 QQVGIRLACVGSIKDDILNMEELALWLIDYL 215
>gi|376261100|ref|YP_005147820.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
BNL1100]
gi|373945094|gb|AEY66015.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
BNL1100]
Length = 292
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 123/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + + + LKL+DV+IE+ DARIP S+ +P ++ + N+ R++ N+ D+
Sbjct: 3 IQWFPGHMAKTRRLIAENLKLVDVIIELLDARIPFSSRNPEINSLINNKPRLVAFNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++A QG I N G G ++ A+ L S+ + ++KG L VR
Sbjct: 63 ADDRISRQWIKWYADQGIDCILINSINGKGLNEIKARARELMSEKIERNKAKGKLFTPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN+++ + RPGVTR +W+R ++E LD+PGI+ + D
Sbjct: 123 TMVVGIPNVGKSSFINKIVGKATAVTGDRPGVTRGKQWIRINSEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q + LA I + D +VA L+ L++
Sbjct: 183 QEVGMNLAFTGAIKDDIMDTGEVAMELLHRLSK 215
>gi|325262273|ref|ZP_08129010.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp. D5]
gi|324032105|gb|EGB93383.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp. D5]
Length = 283
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 126/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP+S+ +P +D N+ R+++LN+ D+
Sbjct: 3 FQWYPGHMTKAKRMMQENIKLIDLVIELVDARIPVSSRNPEIDDLGKNKARLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+AWA YF +G V+ N + G G + + + + + R +G+L R VR
Sbjct: 63 AEDKWNDAWAEYFKGKGYSVVKVNSKKGGGIKSIQGVIQEACKEKIERDRKRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINALAGKACTKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q ++LA I + + ++A L+ L +
Sbjct: 183 QTVGLRLAFIGSIKDEILNSEELAMELIGFLKQ 215
>gi|366165753|ref|ZP_09465508.1| GTP-binding protein YlqF [Acetivibrio cellulolyticus CD2]
Length = 321
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 123/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AKT K L D +KL+DVVIE+ DARIP+S+ +P D N+ +I+VLN+ D+
Sbjct: 34 IQWYPGHMAKTRKILNDNMKLVDVVIELLDARIPISSKNPDFDDIFKNKPKIIVLNKSDL 93
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N+W+ ++ +G IF + G +L + L D + + KG + R ++
Sbjct: 94 ADEKVCNSWSKWYNSKGYANIFIDSIKGKNINQLKGQMQNLMKDKIERDKLKGRISRPIK 153
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN++ + RPGVTR +W+ ++ LD+PGI+ + D
Sbjct: 154 TMIVGIPNVGKSSLINKIAGKASAVTGDRPGVTRGKQWINVNDQIQLLDTPGILWPKFED 213
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ LAI I + D ++A+ L + L R+
Sbjct: 214 IEVGLNLAITGAIKDDILDTVELASTLFEKLVRL 247
>gi|167630258|ref|YP_001680757.1| GTP-binding protein [Heliobacterium modesticaldum Ice1]
gi|167592998|gb|ABZ84746.1| GTP-binding protein, putative [Heliobacterium modesticaldum Ice1]
Length = 283
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 126/214 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+A+ ++++ + L +D+ +E+ DARIPLS+ +P +D+ LG + RI++LN+ D+
Sbjct: 4 IQWFPGHMARAQRQVGEDLAKVDLALELVDARIPLSSRNPDIDRILGEKPRIILLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A + YF Q + + G G ++ L + + + R +G+ PRA R
Sbjct: 64 AEPAATRCFIDYFRLQSIPALSIDAVSGEGVRAIAPLVEQTLKPLIQRWRQRGMRPRAFR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSSLINRL R A RPGVTR +WVR G+ LE LD+PGI+ + D
Sbjct: 124 AMVVGIPNVGKSSLINRLAGRHRTVTADRPGVTRGPQWVRIGQKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
KL+ + + V +VA ++Q L+ +
Sbjct: 184 PLVGFKLSATGAVSDLVVQVQEVAQFILQFLSDV 217
>gi|147678051|ref|YP_001212266.1| GTPase [Pelotomaculum thermopropionicum SI]
gi|146274148|dbj|BAF59897.1| predicted GTPase [Pelotomaculum thermopropionicum SI]
Length = 284
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK +++K+ L+L DVVIEV DARIP S+ +P + + G++ R++VLN+ D+
Sbjct: 3 IHWYPGHMAKARRQVKEDLRLADVVIEVLDARIPASSRNPDIGKIAGSKPRLIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K G + + G G ++ L + LA+ + G PRA R
Sbjct: 63 ADPVLTGRWMDYFKKAGYEAADVDSVSGRGVREIPGLVEQLAAPKIASLANAGRRPRAAR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKS LIN+L+ RR+ PGVTR +WVR +LE +D+PGI+ R+ D
Sbjct: 123 CMVLGIPNVGKSFLINKLVGRRVVKTGSSPGVTRGKQWVRLTGNLELMDTPGILRPRLDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A LA+ + E +++ VA L++ L
Sbjct: 183 PVTAFHLAVTGAVKEEVFNLEKVAGRLLKWL 213
>gi|218283551|ref|ZP_03489541.1| hypothetical protein EUBIFOR_02131 [Eubacterium biforme DSM 3989]
gi|218215819|gb|EEC89357.1| hypothetical protein EUBIFOR_02131 [Eubacterium biforme DSM 3989]
Length = 281
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 129/211 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQW+PGH+ K ++++++ LK +D VIE+RDAR+P ++ +P++DQ + N+ R+++L+++D
Sbjct: 4 VQWFPGHMTKAKRQMEENLKKVDFVIEIRDARMPDASKNPMLDQLIQNKPRLILLSKKDK 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + KV+ + + +L + + L ++ K++ +G+ PRA+R
Sbjct: 64 ADKELTKQWVNALETENQKVLALDFIHENFSKQLIKASNELCINLIEKQKRRGMKPRALR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+ IN KR+ RPGVT+ L+W++ G+ LE LD+PG++ + D
Sbjct: 124 AMVCGIPNVGKSTFINTFAKRKAAQTGDRPGVTKSLQWIKVGQTLELLDTPGVLWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KLA+ I ++ ++ D+A + L
Sbjct: 184 QQVGLKLALLGSIKDQVVNMDDLALFACEYL 214
>gi|295110186|emb|CBL24139.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus obeum
A2-162]
Length = 284
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYPGH+ K ++++++ LKL+D++IE+ DAR+PLS+ +P +DQ N+ R+++LN+ D+
Sbjct: 3 VQWYPGHMTKAKRQMQEDLKLIDLIIELVDARVPLSSRNPDIDQLGQNKSRLILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F +G V+ + + G G + + + + + R +G+ R +R
Sbjct: 63 ADERQNEAWKEFFQSKGFHVVKVDSRNGAGMKTIQNVIQEACKEKIERDRRRGIKNRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+ IN + RPGVT+ +W+R K++E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTFINTFAGKACAKTGNRPGVTKGKQWIRLNKNVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q I+LA I + ++ ++A L+ L
Sbjct: 183 QEVGIRLAFVGSIKDDILNMEELALKLIDYL 213
>gi|163791098|ref|ZP_02185518.1| hypothetical protein CAT7_11800 [Carnobacterium sp. AT7]
gi|159873654|gb|EDP67738.1| hypothetical protein CAT7_11800 [Carnobacterium sp. AT7]
Length = 284
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 132/211 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ +++KL+DV+ E+ DAR+PLS+ +P++D+ +G + RI++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKIKLVDVIFELVDARLPLSSRNPILDEIIGEKPRIIILNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG + Q G G ++ AK + +R +KG+ PRA+R
Sbjct: 63 ADPVQTKKWVEYFNEQGIAAVPIVAQEGKGMKQVMEKAKEILKPKFDRRAAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+LINR +K+ + +PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMSIGIPNVGKSTLINRFIKKNVAKTGNKPGVTKAQQWLKLGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A KLA+ I + + D+A ++ +
Sbjct: 183 PAIGQKLALTGAIKDTILQLDDIAMYGIEFM 213
>gi|374296156|ref|YP_005046347.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
clariflavum DSM 19732]
gi|359825650|gb|AEV68423.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
clariflavum DSM 19732]
Length = 290
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AKT + L + +KL+DVVIE+ DARIP+S+ +P D N+ +I+VLN+ D+
Sbjct: 3 IQWYPGHMAKTRRILAENIKLVDVVIELLDARIPISSKNPDFDDIFKNKPKIIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++W+ ++ +G IF + G L + L D + + KG + R +R
Sbjct: 63 ADEKISSSWSKWYNSKGYANIFIDSIKGKNINLLKNKMQDLMKDKIERDKLKGRISRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN++ R RPGVTR +W+ ++ LD+PGI+ + +
Sbjct: 123 TMIVGIPNVGKSSLINKIAGRASAVTGDRPGVTRGKQWINVNDKIQLLDTPGILWPKFEN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
I LAI I + D ++A+IL + LAR+
Sbjct: 183 PEVGINLAITGAIKDDVIDTVELASILFEKLARL 216
>gi|158320502|ref|YP_001513009.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
gi|158140701|gb|ABW19013.1| GTP-binding protein HSR1-related [Alkaliphilus oremlandii OhILAs]
Length = 280
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ +++QLKL+D+V E+ DARIP+S+ +P +DQ +G++ ++++LN+ D+
Sbjct: 3 INWYPGHMKKTKELIREQLKLVDIVYELLDARIPISSRNPDVDQIIGDKPKVIILNKIDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + VI N G G +L+ ++ D KG PR R
Sbjct: 63 ADPRATAKWVEYFKRNSITVIPINTITGEGIRQLAEESERAIKDKMDALIKKGRRPRPAR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSSLIN+L R+ RPGVT+ +W+R ++E LD+PGI+ + D
Sbjct: 123 IMIVGIPNVGKSSLINKLAGRKSTQTGDRPGVTKSKQWIRLKGNMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A+ LA I + D +A L+++L
Sbjct: 183 EEVALNLAFSGAIKDEIMDTETLAYKLLEIL 213
>gi|226325141|ref|ZP_03800659.1| hypothetical protein COPCOM_02933 [Coprococcus comes ATCC 27758]
gi|225206489|gb|EEG88843.1| ribosome biogenesis GTP-binding protein YlqF [Coprococcus comes
ATCC 27758]
Length = 285
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 124/210 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DAR+P+S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLVIELVDARVPMSSRNPDIDELGKNKARLILLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W YF +G + N + G G + + + + + R +G+L R VRA
Sbjct: 64 DEKQTEEWIGYFRGKGYSAVKVNSRKGGGIKSIQGVIQEACKEKTERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINALAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA I + ++ ++AA L+ +
Sbjct: 184 QVGLRLAFIGSIKDEIMNLEELAAELISFM 213
>gi|385799834|ref|YP_005836238.1| ribosome biogenesis GTP-binding protein YlqF [Halanaerobium
praevalens DSM 2228]
gi|309389198|gb|ADO77078.1| ribosome biogenesis GTP-binding protein YlqF [Halanaerobium
praevalens DSM 2228]
Length = 290
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 1/215 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++ LKD LK++D+VIEV DARIP+S+ +P + + + + ++ VLN++D+
Sbjct: 2 IQWYPGHMAKAKRILKDDLKMVDIVIEVADARIPVSSQNPDLKKLISKQTKVTVLNKKDL 61
Query: 160 ISMADRNAWATYFAKQGTKV-IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
W YF+++ ++ + N G G L + + K KG PR +
Sbjct: 62 ADPNYNQKWLQYFSEKNSEAAVLINSLTGEGVSDLKSVLNNTYDQIAAKLAKKGRNPRRL 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA I+G PNVGKS+LIN L ++ +PGVTR +WV G+ + LD+PGI+ + S
Sbjct: 122 RAMIIGIPNVGKSALINLLAGSKITTIGDKPGVTRGRQWVNVGQKIRLLDTPGILWPKFS 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
D+ A KLA+ I YD A L++ + I
Sbjct: 182 DEDKAYKLALTGAISNDIYDAELAAYKLIKFIIEI 216
>gi|20807903|ref|NP_623074.1| GTPase [Thermoanaerobacter tengcongensis MB4]
gi|20516470|gb|AAM24678.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
Length = 277
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +KE+ LKL+DVV E+ DARIP S+ +P D+ +K+I++LN+ED+
Sbjct: 2 IQWYPGHMAKAKKEIISNLKLVDVVYEIVDARIPRSSRNPDFDEITKRKKKIMLLNKEDL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F ++G + + N G G +L K + D+ + KGL PR +R
Sbjct: 62 ADERITDLWIKHFKEKGIEAVKVNAITGKGFKELEEKTKEVCKDILEAKVKKGLTPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+ IN L+ R+ +PGVT+ L W+R L+ LD+PG++ + D
Sbjct: 121 GMILGIPNVGKSTFINTLIGRKKAKTGDKPGVTKSLHWIRTPY-LDLLDTPGVLWPKFED 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LAI I + ++ +VA LV +L
Sbjct: 180 KTTGFMLAITGAIKDEILEMEEVALFLVSIL 210
>gi|150016065|ref|YP_001308319.1| ribosomal biogenesis GTPase [Clostridium beijerinckii NCIMB 8052]
gi|149902530|gb|ABR33363.1| GTP-binding protein, HSR1-related [Clostridium beijerinckii NCIMB
8052]
Length = 287
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +++ L + RI++LN+ D+
Sbjct: 3 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIEKLLEGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y K KV+ N G G + AL + + + ++KG++ +R
Sbjct: 63 TDGKVTKEWINYLTKDDVKVLEVNCLKGDGLKNIKPTLLALLKEKHDRLKAKGMVNITMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + RPGVT+ +W++ G +E LD+PG++ R D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNNIAKTGDRPGVTKSKQWIKTGIGIEMLDTPGVLWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A+ LA I + D+ ++A LV+ L
Sbjct: 183 DETALNLAFTGAIKDEIMDIEELALKLVEKL 213
>gi|220928166|ref|YP_002505075.1| GTP1/OBG protein [Clostridium cellulolyticum H10]
gi|219998494|gb|ACL75095.1| GTP1/OBG protein [Clostridium cellulolyticum H10]
Length = 292
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 122/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + + + LKL+DV+IE+ DARIP S+ +P ++ + N+ R++ N+ D+
Sbjct: 3 IQWFPGHMAKTRRLIAENLKLVDVIIELLDARIPFSSRNPEINSLIKNKPRLVAFNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++A QG I N G G ++ A+ L + + R+KG L VR
Sbjct: 63 ADERISRQWIKWYADQGIDCILINSINGKGLNEIKAKARELMFEKIERNRAKGKLFTPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN+++ + RPGVTR +W+R ++E LD+PGI+ + D
Sbjct: 123 TMVVGIPNVGKSSFINKIVGKATAVTGDRPGVTRGKQWIRISSEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q + LA I + D +VA L+ L++
Sbjct: 183 QEVGMNLAFTGAIKDDIMDTGEVAMALLYRLSK 215
>gi|342215090|ref|ZP_08707755.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp. oral
taxon 780 str. F0422]
gi|341589739|gb|EGS33002.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp. oral
taxon 780 str. F0422]
Length = 297
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQW+PGH+AK + + + K +DVVIE+ DARIP S+ +P++ + +G++ +++LN+ D+
Sbjct: 9 VQWFPGHMAKATRMITEHKKKVDVVIELLDARIPRSSANPVIRELIGDKPHVVILNKCDL 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F +G I + + G G +L + ++LA + + KG+ R VR
Sbjct: 69 ANPKATKEWIEFFKNEGIHAIAIDSKNGKGNKQLVKTVESLAQPIIDRWLKKGIKGRTVR 128
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN+L A +PG TR +WV+ GK+LE LD+PG++ + D
Sbjct: 129 TMILGIPNVGKSTLINKLAGSAATRTANKPGHTRGQQWVKVGKNLELLDTPGVLWPKFED 188
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q AA +LA+ G S DV D+ +++ Q+LA
Sbjct: 189 QRAAARLAMT---GAISDDVYDLDSVIKQLLA 217
>gi|254479482|ref|ZP_05092807.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
gi|214034586|gb|EEB75335.1| putative GTPase [Carboxydibrachium pacificum DSM 12653]
Length = 277
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +KE+ LKL+DVV E+ DARIP S+ +P D+ +K+I++LN+ED+
Sbjct: 2 IQWYPGHMAKAKKEIISNLKLVDVVYEIVDARIPRSSRNPDFDEITKGKKKIMLLNKEDL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +F ++G + + N G G +L K + D+ + KGL PR +R
Sbjct: 62 ADERITDLWIKHFKERGIEAVKVNAITGKGFKELEEKTKEVCKDILEAKVKKGLTPR-LR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+ IN L+ R+ +PGVT+ L W+R L+ LD+PG++ + D
Sbjct: 121 GMILGIPNVGKSTFINTLIGRKKAKTGDKPGVTKSLHWIRTPY-LDLLDTPGVLWPKFED 179
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LAI I + ++ +VA LV +L
Sbjct: 180 KTVGFMLAITGAIKDEILEMEEVALFLVSIL 210
>gi|347521655|ref|YP_004779226.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|385832960|ref|YP_005870735.1| GTP-binding protein [Lactococcus garvieae Lg2]
gi|343180223|dbj|BAK58562.1| GTP-binding protein [Lactococcus garvieae ATCC 49156]
gi|343182113|dbj|BAK60451.1| GTP-binding protein [Lactococcus garvieae Lg2]
Length = 285
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++D+ +G++ R++ LN+ D
Sbjct: 5 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLDKIIGDKPRLIALNKAD- 63
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+ADRNA W +F KQG + N + +L+ AK L +D + +G+
Sbjct: 64 --LADRNAVKSWVEFFEKQGIIALAINSKEAHTAKRLTVAAKTLMADKLARNAERGIQNS 121
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
++R IVG PN GKS+L+NRL +++ +PGVT+ +W+R K+LE LD+PGI+ +
Sbjct: 122 SLRTMIVGIPNAGKSTLMNRLAGKKVAVTGNKPGVTKGQQWLRTNKELEILDTPGILWPK 181
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D +KLA+ I ++ + DV +Q
Sbjct: 182 FEDDQVGLKLALTGAIKDQLLPMDDVTIFGLQYF 215
>gi|450044537|ref|ZP_21837905.1| ribosomal biogenesis GTPase [Streptococcus mutans N34]
gi|450086473|ref|ZP_21853668.1| ribosomal biogenesis GTPase [Streptococcus mutans NV1996]
gi|450131251|ref|ZP_21869361.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML8]
gi|450175972|ref|ZP_21885493.1| ribosomal biogenesis GTPase [Streptococcus mutans SM1]
gi|449153988|gb|EMB57611.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML8]
gi|449201504|gb|EMC02495.1| ribosomal biogenesis GTPase [Streptococcus mutans N34]
gi|449219431|gb|EMC19398.1| ribosomal biogenesis GTPase [Streptococcus mutans NV1996]
gi|449245886|gb|EMC44207.1| ribosomal biogenesis GTPase [Streptococcus mutans SM1]
Length = 283
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +GN+ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGNKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|255994296|ref|ZP_05427431.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium saphenum
ATCC 49989]
gi|255993009|gb|EEU03098.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium saphenum
ATCC 49989]
Length = 284
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 123/219 (56%), Gaps = 4/219 (1%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
+ + WYPGH+ K +++ LK++DVVIE+ DAR+PLS+ +P++D L +RI++LN+
Sbjct: 1 MNKINWYPGHMKKATDTIREDLKVIDVVIEILDARVPLSSKNPVLDSLLRKHRRIIILNK 60
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
D+ + W +F QG N G G +L R + S+++ K +
Sbjct: 61 YDLAGDSGNEKWKGHFKTQGADAFLVNSITGFGIKELERHIMKIKSELD----EKNSFNK 116
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R +VG PNVGKSS INR+ K+R +PGVTR + +RF +++ +D+PGI+
Sbjct: 117 PMRLMVVGIPNVGKSSFINRMTKKRSTVTGDKPGVTRGKQIIRFPNNVQLMDTPGILWPN 176
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
D+ A++LA C I + D + +A L+ L + T
Sbjct: 177 FEDELVALRLAFCGCIKDEILDTSTLAVRLIDYLIKDET 215
>gi|315640708|ref|ZP_07895810.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus italicus
DSM 15952]
gi|315483463|gb|EFU73957.1| ribosome biogenesis GTP-binding protein YlqF [Enterococcus italicus
DSM 15952]
Length = 298
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 126/204 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ +++K +D+V E+ DAR+PLS+ +P++DQ + ++ R+++LN+ D+
Sbjct: 11 IQWFPGHMAKARREVGEKIKFVDLVFELVDARLPLSSRNPMLDQIVQHKPRVVLLNKADL 70
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF G + + N + T + AK + + +G+ RA+R
Sbjct: 71 ADESQTRKWQAYFESLGYETLACNAKETNTTKAVLAKAKRTLKEKRARDLERGIQARAIR 130
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+++NRL+ +++ +PGVT+ +W+R G +LE LD+PGI+ + D
Sbjct: 131 AMVLGIPNVGKSTIMNRLVGKKIAQTGNKPGVTKGQQWLRVGNELELLDTPGILWPKFED 190
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I ++ + D+A
Sbjct: 191 QEIGKKLALTGAIKDQLLHLDDIA 214
>gi|268611247|ref|ZP_06144974.1| GTP-binding protein YlqF [Ruminococcus flavefaciens FD-1]
Length = 293
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
++ +QW+PGH+AKT + + LKL+D V+E+ DAR PLS+ +P MD N+ R++VLN+
Sbjct: 6 MKQIQWFPGHMAKTRRLIAANLKLVDAVVEIVDARTPLSSRNPEMDSMTRNKPRLIVLNK 65
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKA-LASDVNVKRRSKGLLP 215
D+ W YF G++ I + + G G L + + + ++ KR G+
Sbjct: 66 CDLADKKATQKWINYFRNNGSEAIAVDCKSGKGLKNLLPVVRTKVLKELMEKRERSGMKG 125
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
AVR IVG PNVGKSSLINR+ + RPGVTR +WV+ + E LD PG++
Sbjct: 126 AAVRLMIVGIPNVGKSSLINRMAGGKRAKVEDRPGVTRTKQWVKLDNNTELLDMPGVLWP 185
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ DQ+AA++LA G S D+ D+ + +++L
Sbjct: 186 KFEDQSAAVRLAFT---GAISDDILDIETLAMKLL 217
>gi|334340375|ref|YP_004545355.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
ruminis DSM 2154]
gi|334091729|gb|AEG60069.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
ruminis DSM 2154]
Length = 283
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 127/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++ LKL+DV +E+ DARIPLS+ +P++ Q LGN+ R+++LN+ D+
Sbjct: 5 IQWFPGHMAKARRQVQEALKLVDVAVELLDARIPLSSENPMIGQILGNKPRVIILNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW + KVI + G G ++ + A L ++ K +KG RA R
Sbjct: 65 ADPGLTKAWQKKLERDQVKVIAVDTLKGEGLKEVPKAANLLVAEQMAKLAAKGRRARAAR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKSS INRL+ RR PGVT+ +W+R LE LD+PGI+ + D
Sbjct: 125 CMVLGIPNVGKSSFINRLVGRRATKTGDLPGVTKGQQWIRLEGSLELLDTPGILWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ + E+ +DV +VA L+Q L
Sbjct: 185 PQVGFKLAVTGAVKEQVFDVYEVALKLLQWL 215
>gi|420144102|ref|ZP_14651590.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
gi|391855554|gb|EIT66103.1| GTP-binding protein [Lactococcus garvieae IPLA 31405]
Length = 285
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++D+ +G++ R++ LN+ D
Sbjct: 5 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLDKIIGDKPRLIALNKAD- 63
Query: 160 ISMADRN---AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+ADRN AW +F KQG + N + +L+ AK L +D + +G+
Sbjct: 64 --LADRNAVKAWVEFFEKQGIIALAINSKEAHTAKRLTVAAKTLMADKLARNAERGIQNS 121
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
++R IVG PN GKS+L+NRL +++ +PGVT+ +W+R K+LE LD+PGI+ +
Sbjct: 122 SLRTMIVGIPNAGKSTLMNRLAGKKVAVTGNKPGVTKGQQWLRTNKELEILDTPGILWPK 181
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D +KLA+ I ++ + DV +Q
Sbjct: 182 FEDDQVGLKLALTGAIKDQLLPMDDVTIFGLQYF 215
>gi|160947173|ref|ZP_02094340.1| hypothetical protein PEPMIC_01106 [Parvimonas micra ATCC 33270]
gi|158446307|gb|EDP23302.1| ribosome biogenesis GTP-binding protein YlqF [Parvimonas micra ATCC
33270]
Length = 293
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 123/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT ++ LKL+D+V E+ D+RIP+S+ +P++D L ++ RI++LN+ DM
Sbjct: 3 INWYPGHMKKTMDNIRSSLKLVDIVGEIIDSRIPISSKNPVIDDVLKDKPRIMILNKSDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +Y+ K+G + + G K+ +AK + +D K K L + +R
Sbjct: 63 ADENETKKWLSYYRKKGYGAVVVDALHSKGLDKIYSVAKEMLADKFKKLEEKNLSAKTIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN + KR+ RPGVT+ ++W++ DLE LD+PG++ + D
Sbjct: 123 MMIVGIPNVGKSTFINSISKRKSAKIGDRPGVTKQVQWIKTKNDLELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LA I + D+ ++A + L +
Sbjct: 183 ERIGLHLAFTGAIKDEIMDIENLAFRFIDELNK 215
>gi|395243567|ref|ZP_10420552.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus hominis
CRBIP 24.179]
gi|394484187|emb|CCI81560.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus hominis
CRBIP 24.179]
Length = 279
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+DV+IEV DAR+P+S+ +P++ Q + I++LN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIVILNKSDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K+G+ V+ + Q L +L K A + K KG +R
Sbjct: 64 ADPIQTKLWTKYFQKEGSFVMSMDAQHNTNMTALFKLIKLAAKEKTEKLEQKGASNPVIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R +PGVT+ W++ +++ LD+PGI+ + SD
Sbjct: 124 VALAGIPNCGKSTIINRLVGRNAAIVGDKPGVTKGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA C I E + DVA + L
Sbjct: 184 QTVGYKLAACGAIKEDIFHADDVALFAINFL 214
>gi|374997103|ref|YP_004972602.1| ribosome biogenesis GTP-binding protein YlqF [Desulfosporosinus
orientis DSM 765]
gi|357215469|gb|AET70087.1| ribosome biogenesis GTP-binding protein YlqF [Desulfosporosinus
orientis DSM 765]
Length = 277
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 133/211 (63%), Gaps = 1/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + L++QLK +DVV+E+ DARIP S+ +P++ + LGN+ R+L+LN+ D+
Sbjct: 3 IQWFPGHMAKTRRLLEEQLKWVDVVLELADARIPASSRNPMLHKLLGNKTRLLLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ + + W T+ K+ + V + GMG ++ + + K+ +KG+ P+ ++
Sbjct: 63 AAPNETSKWLTHL-KESSPVFAVSATKGMGIKQIVPELEQMVRAKQAKQAAKGIRPQLIK 121
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN+GKSSLIN+L A +PGVTR +WVR + +E LD+PG++ + D
Sbjct: 122 AMIVGIPNIGKSSLINQLTGGAQVKVANKPGVTRGNQWVRIHERVELLDTPGMLWPKFDD 181
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA + + +D+ ++AA +++ L
Sbjct: 182 LDVGRKLAALGAVKDDVFDLEELAAWVLEWL 212
>gi|403069205|ref|ZP_10910537.1| hypothetical protein ONdio_06380 [Oceanobacillus sp. Ndiop]
Length = 283
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 126/212 (59%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QW+PGH+AK +E++++LKL+D V+E+ DAR PLS+ +P++ Q L ++ +++VL ++D
Sbjct: 2 PIQWFPGHMAKARREVEEKLKLVDFVMELVDARAPLSSQNPMLQQVLQHKSKMIVLMKKD 61
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+ + W +F ++ I + ++ ++AK L K KG+ PR
Sbjct: 62 LADPRETEKWINHFREKEVPAIAVDVNNKADINRVIQMAKELGQVKMEKLLKKGIKPRPS 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LINRL +++ RPG+T+ W++ KD E LD+PGI+ +
Sbjct: 122 RAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLWIKVKKDFELLDTPGILWPKFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ +LA I ++ + D+ A ++ +
Sbjct: 182 DQTVGYRLAAIGTIKDQLLSLQDITAFVIDYM 213
>gi|154497937|ref|ZP_02036315.1| hypothetical protein BACCAP_01917 [Bacteroides capillosus ATCC
29799]
gi|150272927|gb|EDN00084.1| ribosome biogenesis GTP-binding protein YlqF [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 296
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 126/212 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KT++ + + LK +D+V EV DARIP+S+ +P +D +G + R++VLNR D
Sbjct: 3 IQWFPGHMKKTQRMIAENLKYVDIVAEVIDARIPVSSRNPDIDTLVGEKPRLIVLNRADQ 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F +G V+ ++ + G G + S + K + D + ++KG + R +R
Sbjct: 63 ADPAGNRLWGDWFRSRGWSVLETDAKEGKGINQFSPVVKEVLKDKIQQWQAKGQVGRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN++ +R+ A+ +PGVTR +WV L+ LD+PGI+ + D
Sbjct: 123 AMIVGVPNVGKSTFINKVARRKSAKASDKPGVTRGKQWVAVDAGLDLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ LA + + D +A L++ LA
Sbjct: 183 PQTGLHLAFTGAVKDEIMDTETLACHLLEELA 214
>gi|225572003|ref|ZP_03780867.1| hypothetical protein RUMHYD_00297 [Blautia hydrogenotrophica DSM
10507]
gi|225040536|gb|EEG50782.1| ribosome biogenesis GTP-binding protein YlqF [Blautia
hydrogenotrophica DSM 10507]
Length = 280
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYPGH+ K ++ +++ +KL+D+++E+ DARIPLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 3 VQWYPGHMTKAKRMMQEDIKLIDLIVELVDARIPLSSRNPDIDELGKNKSRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG V N + G G ++ L + + + R +G+ R VR
Sbjct: 63 ADEKGNSQWEAYFKAQGFHVHKINARSGAGVKAINGLIQVACKEKIERDRRRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + +PGVT+ +W+R K++E LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINTFAGKACTKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q ++LA+ I + ++ +++ L+ L
Sbjct: 183 QEVGVRLAVIGSIKDDILNLDELSLSLIHYL 213
>gi|312865180|ref|ZP_07725408.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus downei
F0415]
gi|311099291|gb|EFQ57507.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus downei
F0415]
Length = 283
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG K + N + KL+ AK L SD + R KG+ +R
Sbjct: 64 ADPLLIKDWQAYFEKQGIKTLLINAKEQSTVKKLTDAAKNLMSDKLERLREKGIQKEGLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 184 QEVGLKLALT 193
>gi|342218751|ref|ZP_08711355.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera sp. UPII
135-E]
gi|341588879|gb|EGS32251.1| ribosome biogenesis GTP-binding protein YlqF [Megasphaera sp. UPII
135-E]
Length = 283
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/209 (36%), Positives = 125/209 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK +K +++ +K++DVVIE+ DARIP S+T+P++ +G + I+VLN+ D+
Sbjct: 3 INWYPGHMAKAKKLIQENMKMIDVVIELVDARIPKSSTNPMIGNLIGQKPAIIVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ +G I N + +L + ++LA RS+GL R+VR
Sbjct: 63 ADPEEVKQWLQYYRSEGRIAIPLNSKESKSIKRLIQEIRSLAEPKLAHWRSRGLKNRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+L+NRL R A +PG T+ +WV G L+ LD+PG++ ++ D
Sbjct: 123 TMILGIPNVGKSTLMNRLAGRNAAKTADKPGETKGKQWVHLGDQLDLLDTPGVLWPKLED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
Q +A +LA I + +D+ V L++
Sbjct: 183 QVSAYRLAATGAISDTVFDMETVVFSLIE 211
>gi|172057904|ref|YP_001814364.1| GTP-binding protein HSR1-related [Exiguobacterium sibiricum 255-15]
gi|171990425|gb|ACB61347.1| GTP-binding protein HSR1-related [Exiguobacterium sibiricum 255-15]
Length = 288
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 128/217 (58%), Gaps = 2/217 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DVVIE+ DAR+P+S+ +P+++Q + R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARREVTEKLKLIDVVIELVDARLPMSSRNPMVEQITAGKPRLIVLNKSDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W K G VI + + G ++ A L D + + R KG P A+R
Sbjct: 63 ADARLTEKWMHALRKDGVDVIAVDAKHSKGLGQIHEGALRLMKDKHDRMRDKGRNPSAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGK-DLEFLDSPGIIPMRIS 278
A I+G PNVGKS+LINRL R + RPGVT+ +W++ ++E LD+PGI+ +
Sbjct: 123 ALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWIKMKTGEMELLDTPGILWPKFD 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML-ARIP 314
DQ +LA I + ++ D+A ++ L +R P
Sbjct: 183 DQLVGYRLAATGAIKDDILNIDDIALFAIRELKSRYP 219
>gi|450164201|ref|ZP_21881202.1| ribosomal biogenesis GTPase [Streptococcus mutans B]
gi|449242281|gb|EMC40879.1| ribosomal biogenesis GTPase [Streptococcus mutans B]
Length = 283
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 129/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ +AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEVAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|343520555|ref|ZP_08757524.1| ribosome biogenesis GTP-binding protein YlqF [Parvimonas sp. oral
taxon 393 str. F0440]
gi|343397513|gb|EGV10047.1| ribosome biogenesis GTP-binding protein YlqF [Parvimonas sp. oral
taxon 393 str. F0440]
Length = 293
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 123/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT ++ LKL+D+V E+ D+RIP+S+ +P++D L ++ RI++LN+ DM
Sbjct: 3 INWYPGHMKKTMDNIRASLKLVDIVGEIIDSRIPISSKNPVIDDVLKDKPRIMILNKSDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +Y+ K+G + + G K+ +AK + +D K K L + +R
Sbjct: 63 ADENETKKWLSYYRKKGYGAVVVDALHSKGLDKIYSVAKEMLADKFKKLEEKNLSAKTIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+ IN + KR+ RPGVT+ ++W++ DLE LD+PG++ + D
Sbjct: 123 MMIVGIPNVGKSTFINSISKRKSAKIGDRPGVTKQVQWIKTKNDLELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LA I + D+ ++A + L +
Sbjct: 183 ERIGLHLAFTGAIKDEIMDIENLAFRFIDELNK 215
>gi|374603429|ref|ZP_09676409.1| GTPase [Paenibacillus dendritiformis C454]
gi|374391025|gb|EHQ62367.1| GTPase [Paenibacillus dendritiformis C454]
Length = 296
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 127/212 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++++LKL+DV IE+ DAR+P+S+ +P++ L ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIQEKLKLIDVAIELLDARLPMSSRNPMIGDILQHKPRLILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F +G + + G ++ A+ L + ++ +KG+ PR VR
Sbjct: 63 ADPEMNARWLQAFRGEGHAALAIDASTGTNVAQIPGEARKLLEEKIQRQLAKGMKPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+LIN+L R + RPGVT+ +W++ G ++E LD+PGI+ + D
Sbjct: 123 ALIVGIPNVGKSTLINKLAGRSVAATGDRPGVTKGQQWIKVGSEMELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q +LA I + +V D+A ++ LA
Sbjct: 183 QEVGYRLAATGAIKDEILNVEDIAFYTIKQLA 214
>gi|291543925|emb|CBL17034.1| Ras superfamily GTP-binding protein YlqF [Ruminococcus
champanellensis 18P13]
Length = 290
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 121/215 (56%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+R +QW+PGH+ KT + + L L+D V+E+ DARIP+S+ +P MD+ G + R+L+LN
Sbjct: 3 EIRSIQWFPGHMTKTRRMITANLSLVDAVVEILDARIPVSSRNPEMDRLTGGKPRLLILN 62
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ DM W + G + + + G G + + L + + R+KGL+
Sbjct: 63 KSDMADERTTQQWLHRLRRSGCAAVAMDCKSGKGVKQFHPALRELLKEQIAQWRAKGLVN 122
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R + +VG PNVGKSS IN++ + RPGVTR +WV+ G +E LD+PG++
Sbjct: 123 RPIHVMVVGIPNVGKSSFINKMAGGKRAKVEDRPGVTRTKQWVKLGDGVEMLDTPGVLWP 182
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ DQ AA +LA I + D+ +A +L++ L
Sbjct: 183 KFDDQQAAQRLAFTGAINDDVLDIEALAMLLLEYL 217
>gi|429765770|ref|ZP_19298050.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium celatum
DSM 1785]
gi|429185623|gb|EKY26597.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium celatum
DSM 1785]
Length = 317
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 125/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +D+ + RI++LN+ D+
Sbjct: 4 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIDKLCSGKPRIILLNKSDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW + + KV+ N G G ++ L + + + ++KGL+ +R
Sbjct: 64 TESKVTKAWIKELSNENVKVLEVNCLRGQGLQQIKPALLELLKEKHERAKAKGLVKFMMR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS+ IN++ K + R GVT+ +W++ D+E LD+PG++ + D
Sbjct: 124 VMVVGVPNCGKSTFINKMAKNNIAKTGDRAGVTKSKQWIKTAFDMEMLDTPGVLWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ A+ LA I + D+ ++A +LV+ L +
Sbjct: 184 ETTALNLAFTGAIKDEIMDIEELAYMLVKRLQK 216
>gi|421860563|ref|ZP_16292669.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
gi|410829749|dbj|GAC43106.1| predicted GTPase [Paenibacillus popilliae ATCC 14706]
Length = 296
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++++LKL+DV IE+ DAR+P+S+ +P++ L N+ R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIQEKLKLIDVAIELLDARLPMSSRNPMIGDILQNKPRLILLNKADL 62
Query: 160 ISMADRNA-WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
D NA W F +G + + G ++ A+ L + ++ +KG+ PR V
Sbjct: 63 AD-PDMNAQWLQAFRGEGHAALAIDASTGTNVAQIPGEARKLLEEKIQRQLAKGMKPRPV 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA IVG PNVGKS+LIN+L R + RPG+T+ +W++ G ++E LD+PGI+ +
Sbjct: 122 RALIVGIPNVGKSTLINKLAGRSVAATGDRPGITKGQQWIKVGFEMELLDTPGILWPKFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
DQ +LA I + +V ++A +++ LA
Sbjct: 182 DQEVGYRLAATGAIKDEILNVEEIAFYVIKQLA 214
>gi|302191335|ref|ZP_07267589.1| hypothetical protein LineA_04927 [Lactobacillus iners AB-1]
gi|309804171|ref|ZP_07698249.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 11V1-d]
gi|309809273|ref|ZP_07703142.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
SPIN 2503V10-D]
gi|312871435|ref|ZP_07731530.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 3008A-a]
gi|312872375|ref|ZP_07732445.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 2062A-h1]
gi|325911972|ref|ZP_08174374.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
UPII 143-D]
gi|329921303|ref|ZP_08277741.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
SPIN 1401G]
gi|308163754|gb|EFO66023.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 11V1-d]
gi|308170386|gb|EFO72410.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
SPIN 2503V10-D]
gi|311092198|gb|EFQ50572.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 2062A-h1]
gi|311093088|gb|EFQ51437.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 3008A-a]
gi|325476157|gb|EGC79321.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
UPII 143-D]
gi|328934595|gb|EGG31099.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
SPIN 1401G]
Length = 279
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D+L L+DV+IEV DAR+P+S+ +P++ + + N+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDKLDLIDVIIEVLDARLPMSSKNPMISKLIANKAHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F KQG V+ + Q L +L K D K +KG ++
Sbjct: 64 ADAIKTKAWVKFFQKQGILVLPMDAQHSNNMSGLIKLIKIATKDKVDKIIAKGAKEPVIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INRL+ R +PGVTR W++ +++ LD+PGI+ + D
Sbjct: 124 VAIAGIPNCGKSTIINRLVGRNATIVGDKPGVTRGQNWLKTDTNIQILDTPGILWPKFDD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +KLA C I + + DV+ +++ L
Sbjct: 184 RNIGLKLAACGAIKDSVFHADDVSIFVLKYL 214
>gi|238916978|ref|YP_002930495.1| hypothetical protein EUBELI_01047 [Eubacterium eligens ATCC 27750]
gi|238872338|gb|ACR72048.1| Hypothetical protein EUBELI_01047 [Eubacterium eligens ATCC 27750]
Length = 303
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 129/221 (58%)
Query: 92 YWTKSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRI 151
Y + R + WYPGH+ K + +++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ RI
Sbjct: 4 YMEEKKRAINWYPGHMTKARRMMEEDIKLVDLVIEIVDARIPLSSRNPDIDKLAKNKARI 63
Query: 152 LVLNREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSK 211
++LN+ D+ + W TYF +G + N +L + ++ L S + R++
Sbjct: 64 VLLNKSDLADDTVTDEWITYFKDKGFYCLKLNSRLNVSNRAVNNLITVACSAKIERDRAR 123
Query: 212 GLLPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPG 271
G+ R+++A IVG PNVGKS+ IN R+ +PGVT+ +W+R +E LD+PG
Sbjct: 124 GIKNRSIKAMIVGIPNVGKSTFINSFTGRKSAKTGNKPGVTKGKQWIRINGSVELLDTPG 183
Query: 272 IIPMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
I+ +I D+ +LA+ I ++ ++ ++A ++ L +
Sbjct: 184 ILWPKIEDRNVGERLAMIGSINDQILNIEELALETIKFLKK 224
>gi|397905566|ref|ZP_10506420.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Caloramator australicus RC3]
gi|397161400|emb|CCJ33754.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Caloramator australicus RC3]
Length = 290
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 124/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ KT++ + D LK +DVV+E+ DARIP+S+ +P +D + N+ RI++LN+ ++
Sbjct: 3 IQWYPGHMVKTKRLIADSLKFIDVVLELLDARIPISSKNPDVDSIIKNKPRIILLNKSEL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ G + + G K+ L K + D + + KG++ R +R
Sbjct: 63 ADPLITKEWIAYYKNNGISALDIDCISGKNINKIYPLIKEILKDKIERTQQKGIIGRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+ IN++ K+ RPGVT+ +W++ K+ E LD+PGI+ + D
Sbjct: 123 ALVLGIPNVGKSTFINKIAKKSSAQTGDRPGVTKNKQWIKVNKEFELLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ A+ LA I E DV +++ + + +I
Sbjct: 183 EKVALHLAYVKSIKEEILDVVELSIKFLNEIKQI 216
>gi|223986425|ref|ZP_03636430.1| hypothetical protein HOLDEFILI_03742 [Holdemania filiformis DSM
12042]
gi|223961621|gb|EEF66128.1| hypothetical protein HOLDEFILI_03742 [Holdemania filiformis DSM
12042]
Length = 281
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 120/193 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E+++ LKL+D+VIE+RD RIPLS+ +P++D+ + + R++VL+++D
Sbjct: 3 IQWFPGHMTKAKREMQENLKLVDLVIELRDCRIPLSSKNPMLDEIIQTKPRLIVLSKKDK 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W T VI ++ KL++ K + + + +G+ PRA+R
Sbjct: 63 GEAEITQQWIEKLKDDTTLVIAADLLHDSFVPKLTQACKEVMKEKIERMIRRGIRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS++INRL +++ A RPGVTR L+WV+ KD+E LD+PG++ + D
Sbjct: 123 AMVVGVPNVGKSTMINRLAGKKIAQTADRPGVTRSLQWVKLNKDVELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDI 292
LA+ I
Sbjct: 183 PTVGFHLALTGAI 195
>gi|313892603|ref|ZP_07826190.1| ribosome biogenesis GTP-binding protein YlqF [Dialister
microaerophilus UPII 345-E]
gi|313119000|gb|EFR42205.1| ribosome biogenesis GTP-binding protein YlqF [Dialister
microaerophilus UPII 345-E]
Length = 286
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT++ + + LK +DV +E+ DARIP+S+ +P+++ + N+ RI+VLN+ D+
Sbjct: 3 IQWFPGHMAKTKRLITEHLKAVDVAVELLDARIPMSSANPMVENLVQNKPRIIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF K+ VI + G KL L + A V K + +GL R+VR
Sbjct: 63 ADVKITEKWIEYFKKENIDVIPVSTYNGKDKKKLINLIREKAKPVLEKWQRRGLKNRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L + A PG T+ +WVR L+ LD+PG++ + D
Sbjct: 123 IMILGIPNVGKSTLINFLSGSKATRTANTPGHTKGKQWVRLSSGLDLLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLA I +D +V L+ L I
Sbjct: 183 QNAALKLAATGAIAGEIFDSYEVVTTLLAALKEI 216
>gi|329121229|ref|ZP_08249856.1| ribosome biogenesis GTP-binding protein YlqF [Dialister
micraerophilus DSM 19965]
gi|327470163|gb|EGF15626.1| ribosome biogenesis GTP-binding protein YlqF [Dialister
micraerophilus DSM 19965]
Length = 286
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 124/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT++ + + LK +DV +E+ DARIP+S+ +P+++ + N+ RI+VLN+ D+
Sbjct: 3 IQWFPGHMAKTKRLITEHLKAVDVAVELLDARIPMSSANPMVENLVQNKPRIIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF K+ VI + G KL L + A V K + +GL R+VR
Sbjct: 63 ADVKITEKWIEYFKKENIDVIPVSTYNGKDKKKLINLIREKAKPVLEKWQRRGLKNRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L + A PG T+ +WVR L+ LD+PG++ + D
Sbjct: 123 IMILGIPNVGKSTLINFLSGSKATRTANTPGHTKGKQWVRLSSGLDLLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q AA+KLA I +D +V L+ L I
Sbjct: 183 QNAALKLAATGAIAGEIFDSYEVVTTLLAALKEI 216
>gi|421767749|ref|ZP_16204490.1| 50S ribosomal subunit maturation GTPase RbgA [Lactococcus garvieae
DCC43]
gi|407623705|gb|EKF50521.1| 50S ribosomal subunit maturation GTPase RbgA [Lactococcus garvieae
DCC43]
Length = 285
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 131/212 (61%), Gaps = 6/212 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++D+ +G++ R++ LN+ D
Sbjct: 5 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLDKIIGDKPRLIALNKAD- 63
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+ADRNA W +F QG + N + + +L+ AK L +D + +G+
Sbjct: 64 --LADRNAVKSWVEFFESQGIIALAINSKEAHTSKRLTVAAKTLMADKLARNAERGIQNS 121
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
++R IVG PN GKS+L+NRL +++ +PGVT+ +W+R K+LE LD+PGI+ +
Sbjct: 122 SLRTMIVGIPNAGKSTLMNRLAGKKVAVTGNKPGVTKGQQWLRTNKELEILDTPGILWPK 181
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQ 308
D +KLA+ I ++ + DV +Q
Sbjct: 182 FEDDQVGLKLALTGAIKDQLLPMDDVTIFGLQ 213
>gi|309805733|ref|ZP_07699773.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 09V1-c]
gi|309806753|ref|ZP_07700747.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 03V1-b]
gi|309807512|ref|ZP_07701469.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 01V1-a]
gi|312873986|ref|ZP_07734022.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 2052A-d]
gi|312875498|ref|ZP_07735501.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 2053A-b]
gi|325912835|ref|ZP_08175213.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
UPII 60-B]
gi|349611413|ref|ZP_08890649.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus sp.
7_1_47FAA]
gi|308164986|gb|EFO67229.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 09V1-c]
gi|308166868|gb|EFO69053.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 03V1-b]
gi|308169239|gb|EFO71300.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LactinV 01V1-a]
gi|311089009|gb|EFQ47450.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 2053A-b]
gi|311090535|gb|EFQ48943.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
LEAF 2052A-d]
gi|325477828|gb|EGC80962.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
UPII 60-B]
gi|348608735|gb|EGY58705.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus sp.
7_1_47FAA]
Length = 279
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D+L L+DV+IEV DAR+P+S+ +P++ + + N+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDKLDLIDVIIEVLDARLPMSSKNPMISKLIANKAHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F KQG V+ + Q L +L K D K +KG ++
Sbjct: 64 ADAIKTKAWVKFFQKQGILVLPMDAQHSNNMSGLIKLIKIATKDKVDKIIAKGAKEPVIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INRL+ R +PGVTR W++ +++ LD+PGI+ + D
Sbjct: 124 VAIAGIPNCGKSTIINRLVGRNATIVGDKPGVTRGQNWLKTDTNIQILDTPGILWPKFDD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +KLA C I + + DV+ +++ L
Sbjct: 184 RNIGLKLAACGAIKDSVFHADDVSIFVLKYL 214
>gi|442805506|ref|YP_007373655.1| ribosome biogenesis GTPase A [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741356|gb|AGC69045.1| ribosome biogenesis GTPase A [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 301
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 123/217 (56%), Gaps = 1/217 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + L + LKL+DVVIE+ DARIP S+ +P +D+ N+ R++ LN+ D+
Sbjct: 3 IQWFPGHMAKTRRMLAENLKLIDVVIELLDARIPRSSQNPEIDKLTKNKPRVIALNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + G + N G G L K + K KG + R +R
Sbjct: 63 ADPRKTERWVEYFNQNGIDTVCINALTGEGIPALVVQLKKMMEPKLRKVAEKGRIQRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN++ + RPGVTR +WVR +++ LD+PGI+ + D
Sbjct: 123 TMIVGIPNVGKSALINKIAGKAAAATGDRPGVTRNKQWVRINPEIQLLDTPGILWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI-PT 315
+ LA I + D+ +A+ L+++LA++ PT
Sbjct: 183 PKTGLYLAFTGAIRDEILDITTLASNLLELLAKMYPT 219
>gi|259500646|ref|ZP_05743548.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
DSM 13335]
gi|315653519|ref|ZP_07906440.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
ATCC 55195]
gi|259168030|gb|EEW52525.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
DSM 13335]
gi|315489210|gb|EFU78851.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus iners
ATCC 55195]
Length = 281
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D+L L+DV+IEV DAR+P+S+ +P++ + + N+ I++LN+ D+
Sbjct: 6 IQWYPGHMNKAKNQLEDKLDLIDVIIEVLDARLPMSSKNPMISKLIANKAHIIILNKADL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F KQG V+ + Q L +L K D K +KG ++
Sbjct: 66 ADAIKTKAWVKFFQKQGILVLPMDAQHSNNMSGLIKLIKIATKDKVDKIIAKGAKEPVIK 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INRL+ R +PGVTR W++ +++ LD+PGI+ + D
Sbjct: 126 VAIAGIPNCGKSTIINRLVGRNATIVGDKPGVTRGQNWLKTDTNIQILDTPGILWPKFDD 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +KLA C I + + DV+ +++ L
Sbjct: 186 RNIGLKLAACGAIKDSVFHADDVSIFVLKYL 216
>gi|449921541|ref|ZP_21798976.1| ribosomal biogenesis GTPase [Streptococcus mutans 1SM1]
gi|449156980|gb|EMB60434.1| ribosomal biogenesis GTPase [Streptococcus mutans 1SM1]
Length = 283
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|328957388|ref|YP_004374774.1| ribosomal biogenesis GTPase [Carnobacterium sp. 17-4]
gi|328673712|gb|AEB29758.1| ribosomal biogenesis GTPase [Carnobacterium sp. 17-4]
Length = 287
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 134/218 (61%), Gaps = 1/218 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ +++KL+D+V E+ DAR+PLS+ +P++D+ +G + RI++LN+ D+
Sbjct: 3 IQWFPGHMAKARRQVTEKIKLVDIVFELVDARLPLSSRNPILDEIIGEKPRIIILNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + Q G G +L AK L +R +KG+ PRA+R
Sbjct: 63 ADPLETKKWVAYFNDQGIAAVPIVAQEGHGMKQLMAKAKELLQPKFDRRAAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+LINR +K+ + +PGVT+ +W++ GK+LE LD+PGI+ + D
Sbjct: 123 AMSIGIPNVGKSTLINRFVKKNIAQTGNKPGVTKAQQWLKLGKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAI-LVQMLARIPTV 316
KLA+ I + + ++A L +M R P +
Sbjct: 183 PEIGKKLALTGAIKDTILQLDEIAMYGLEEMKIRNPEM 220
>gi|385812304|ref|YP_005848695.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
gi|299783201|gb|ADJ41199.1| GTP-binding protein [Lactobacillus fermentum CECT 5716]
Length = 290
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+Q+ L+D+V E+ DAR+P ST +P +D+ G++ R+L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIKEQMPLVDIVFELVDARVPYSTQNPEIDRMAGDKPRLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + G V+ + + +++ A+ + D R+KG+ RA+R
Sbjct: 64 ADPTTTAHWIDYFEQNGQPVLALDSRAHQVAKQVTVKAQQILKDQLAAERAKGMQKRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R DLE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSADLELLDTPGVLWPKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A LA+ I + Y DVA + L
Sbjct: 184 QTQAKMLALSGAIKDSLYPKDDVAIFALDYL 214
>gi|404370923|ref|ZP_10976238.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
7_2_43FAA]
gi|226912956|gb|EEH98157.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
7_2_43FAA]
Length = 289
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +D+ + R+++LN+ D+
Sbjct: 4 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIDKLCEGKPRVILLNKSDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + + KVI N G G ++ L + + + ++KGL+ +R
Sbjct: 64 SESKVTKMWMNHLSSENVKVIEVNCLTGKGLNQIKPTLDLLLKEKHDRLKAKGLVKIQMR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ K + RPGVT+ +W++ D+E LD+PG++ + D
Sbjct: 124 VMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKSKQWIKTKMDIEMLDTPGVLWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A+ LA I + D+ +++ LV+ L
Sbjct: 184 EKTALNLAFTGAIKDEIMDIEELSFNLVKRL 214
>gi|449958420|ref|ZP_21809743.1| ribosomal biogenesis GTPase [Streptococcus mutans 4VF1]
gi|450140205|ref|ZP_21872835.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML1]
gi|449170022|gb|EMB72763.1| ribosomal biogenesis GTPase [Streptococcus mutans 4VF1]
gi|449232095|gb|EMC31231.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML1]
Length = 283
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|220931580|ref|YP_002508488.1| HSR1-like GTP-binding protein [Halothermothrix orenii H 168]
gi|219992890|gb|ACL69493.1| GTP-binding protein HSR1-related [Halothermothrix orenii H 168]
Length = 282
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYP H+A+ K L + LKL+D+V+EV DARIP S+ +P +D L N+KR++VLN+ D+
Sbjct: 2 VQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKIDL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF ++ V+ N G G +L RL + +N KG R VR
Sbjct: 62 AHPDLTSTWLDYF-RRSYPVMGVNSITGEGIGELKRLLRNEGERINKVLEEKGRQQRPVR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKS+ +N L RPGVTR +W++ GK ++ LD+PGI+ +I D
Sbjct: 121 IMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLKLGKGVQLLDTPGILWPKIED 180
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ KLAI I E +YD A LV L I
Sbjct: 181 EETGHKLAITGAIDENNYDKETAAYKLVCYLMDI 214
>gi|449927031|ref|ZP_21801063.1| ribosomal biogenesis GTPase [Streptococcus mutans 4SM1]
gi|450050424|ref|ZP_21840267.1| ribosomal biogenesis GTPase [Streptococcus mutans NFSM1]
gi|449160029|gb|EMB63317.1| ribosomal biogenesis GTPase [Streptococcus mutans 4SM1]
gi|449202643|gb|EMC03545.1| ribosomal biogenesis GTPase [Streptococcus mutans NFSM1]
Length = 283
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|430750335|ref|YP_007213243.1| ribosome biogenesis GTP-binding protein YlqF [Thermobacillus
composti KWC4]
gi|430734300|gb|AGA58245.1| ribosome biogenesis GTP-binding protein YlqF [Thermobacillus
composti KWC4]
Length = 292
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ + ++++++LK +D VIE+ DAR+P S+ +P++D+ L + R+++LN+ D+
Sbjct: 3 IQWFPGHMTRARRQIQEKLKQIDAVIELLDARVPHSSRNPMIDEILRGKPRLVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL-PRAV 218
+ W F + G + + G G ++S K L + + ++G++ PRAV
Sbjct: 63 ADQRATDRWIAAFREDGLDSLAVDAAGGQGIKEISARVKKLVAPQWERMAARGVVKPRAV 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R IVG PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ +
Sbjct: 123 RVLIVGIPNVGKSTLINRLAGRSVAATGDRPGVTKGQQWIKVGGEMELLDTPGILWPKFD 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
DQ ++LA+ I E ++ ++A V+ LA
Sbjct: 183 DQTVGMRLAVIGSIREEILNLEEIAFFAVKTLA 215
>gi|449875654|ref|ZP_21782326.1| ribosomal biogenesis GTPase [Streptococcus mutans S1B]
gi|449930305|ref|ZP_21802010.1| ribosomal biogenesis GTPase [Streptococcus mutans 3SN1]
gi|449980074|ref|ZP_21816995.1| ribosomal biogenesis GTPase [Streptococcus mutans 5SM3]
gi|449999609|ref|ZP_21824578.1| ribosomal biogenesis GTPase [Streptococcus mutans N29]
gi|450005823|ref|ZP_21826894.1| ribosomal biogenesis GTPase [Streptococcus mutans NMT4863]
gi|450063408|ref|ZP_21844874.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML5]
gi|450127425|ref|ZP_21868583.1| ribosomal biogenesis GTPase [Streptococcus mutans U2A]
gi|450158654|ref|ZP_21878970.1| ribosomal biogenesis GTPase [Streptococcus mutans 66-2A]
gi|449163670|gb|EMB66766.1| ribosomal biogenesis GTPase [Streptococcus mutans 3SN1]
gi|449177481|gb|EMB79782.1| ribosomal biogenesis GTPase [Streptococcus mutans 5SM3]
gi|449186740|gb|EMB88556.1| ribosomal biogenesis GTPase [Streptococcus mutans N29]
gi|449188279|gb|EMB90002.1| ribosomal biogenesis GTPase [Streptococcus mutans NMT4863]
gi|449204705|gb|EMC05491.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML5]
gi|449230813|gb|EMC30059.1| ribosomal biogenesis GTPase [Streptococcus mutans U2A]
gi|449242152|gb|EMC40755.1| ribosomal biogenesis GTPase [Streptococcus mutans 66-2A]
gi|449253617|gb|EMC51563.1| ribosomal biogenesis GTPase [Streptococcus mutans S1B]
Length = 283
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|255281040|ref|ZP_05345595.1| ribosome biogenesis GTP-binding protein YlqF [Bryantella
formatexigens DSM 14469]
gi|255268488|gb|EET61693.1| ribosome biogenesis GTP-binding protein YlqF [Marvinbryantia
formatexigens DSM 14469]
Length = 294
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 122/210 (58%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+DV+IE+ DARIP S+ +P +D+ NR R+L+LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQEDIKLIDVIIELVDARIPQSSRNPDIDELGKNRARVLLLNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
A AW +F +G + + + G L R+ + + + R +G+L R VRA
Sbjct: 64 DAAGCEAWIEHFRAKGYYAVALDSRRKNGMNALGRVLQEACREKIERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+ G PNVGKS+ IN R RPGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVAGIPNVGKSTFINTYAGRACAKTGNRPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA+ I + + ++A L+ L
Sbjct: 184 TVGLRLALIGSIRDEILNTEELALELITFL 213
>gi|449909707|ref|ZP_21794330.1| ribosomal biogenesis GTPase [Streptococcus mutans OMZ175]
gi|449971257|ref|ZP_21814298.1| ribosomal biogenesis GTPase [Streptococcus mutans 2VS1]
gi|450029521|ref|ZP_21832725.1| ribosomal biogenesis GTPase [Streptococcus mutans G123]
gi|450035162|ref|ZP_21834851.1| ribosomal biogenesis GTPase [Streptococcus mutans M21]
gi|450056943|ref|ZP_21842300.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML4]
gi|450067235|ref|ZP_21846489.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML9]
gi|450070397|ref|ZP_21847531.1| ribosomal biogenesis GTPase [Streptococcus mutans M2A]
gi|450093717|ref|ZP_21856703.1| ribosomal biogenesis GTPase [Streptococcus mutans W6]
gi|450110770|ref|ZP_21862320.1| ribosomal biogenesis GTPase [Streptococcus mutans SM6]
gi|450148705|ref|ZP_21875763.1| ribosomal biogenesis GTPase [Streptococcus mutans 14D]
gi|450182873|ref|ZP_21888494.1| ribosomal biogenesis GTPase [Streptococcus mutans 24]
gi|449172252|gb|EMB74883.1| ribosomal biogenesis GTPase [Streptococcus mutans 2VS1]
gi|449194447|gb|EMB95803.1| ribosomal biogenesis GTPase [Streptococcus mutans G123]
gi|449195801|gb|EMB97109.1| ribosomal biogenesis GTPase [Streptococcus mutans M21]
gi|449206006|gb|EMC06727.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML4]
gi|449208171|gb|EMC08788.1| ribosomal biogenesis GTPase [Streptococcus mutans NLML9]
gi|449213883|gb|EMC14206.1| ribosomal biogenesis GTPase [Streptococcus mutans M2A]
gi|449216983|gb|EMC17061.1| ribosomal biogenesis GTPase [Streptococcus mutans W6]
gi|449224544|gb|EMC24176.1| ribosomal biogenesis GTPase [Streptococcus mutans SM6]
gi|449235498|gb|EMC34455.1| ribosomal biogenesis GTPase [Streptococcus mutans 14D]
gi|449244107|gb|EMC42495.1| ribosomal biogenesis GTPase [Streptococcus mutans 24]
gi|449261123|gb|EMC58608.1| ribosomal biogenesis GTPase [Streptococcus mutans OMZ175]
Length = 283
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|387786219|ref|YP_006251315.1| ribosomal biogenesis GTPase [Streptococcus mutans LJ23]
gi|449976138|ref|ZP_21816116.1| ribosomal biogenesis GTPase [Streptococcus mutans 11VS1]
gi|450098219|ref|ZP_21857901.1| ribosomal biogenesis GTPase [Streptococcus mutans SF1]
gi|450171566|ref|ZP_21884063.1| ribosomal biogenesis GTPase [Streptococcus mutans SM4]
gi|379132620|dbj|BAL69372.1| ribosomal biogenesis GTPase [Streptococcus mutans LJ23]
gi|449175866|gb|EMB78242.1| ribosomal biogenesis GTPase [Streptococcus mutans 11VS1]
gi|449221787|gb|EMC21544.1| ribosomal biogenesis GTPase [Streptococcus mutans SF1]
gi|449243888|gb|EMC42289.1| ribosomal biogenesis GTPase [Streptococcus mutans SM4]
Length = 283
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|295115828|emb|CBL36675.1| ribosome biogenesis GTP-binding protein YlqF [butyrate-producing
bacterium SM4/1]
Length = 292
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PL + +P +D+ + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARMPLGSRNPDIDELAKGKGRMVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++F ++G VI N + GMG ++ + + + + R +G+ R VR
Sbjct: 63 ADERMNEQWTSWFKERGFHVIKINARTGMGLKQIHPMVQEACREKIERDRRRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + +PGVT+ +W+R + LE LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGNQWIRLNRTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q + LA I + D ++AA L L
Sbjct: 183 QTVGLNLAFIGSINDEIIDKTELAAELADFL 213
>gi|153813998|ref|ZP_01966666.1| hypothetical protein RUMTOR_00205 [Ruminococcus torques ATCC 27756]
gi|317502412|ref|ZP_07960577.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331088005|ref|ZP_08336928.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336439693|ref|ZP_08619300.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 1_1_57FAA]
gi|145848394|gb|EDK25312.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus torques
ATCC 27756]
gi|316896222|gb|EFV18328.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330409316|gb|EGG88765.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336015591|gb|EGN45405.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 1_1_57FAA]
Length = 280
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 121/210 (57%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K + +++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKARRMMQENIKLIDLIIELVDARVPLSSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ W YF +G + N + G G ++ + + + R +G+L R VRA
Sbjct: 64 EERINDEWIDYFKDRGYSAVKVNSKKGGGMNQIRSAIQEACKEKTERDRKRGILNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN L + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSLAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA I + +++ L++ L
Sbjct: 184 EVGKKLAFIGSIKDEILQTEELSTELIKFL 213
>gi|417793389|ref|ZP_12440667.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK255]
gi|334273117|gb|EGL91468.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK255]
Length = 283
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 125/196 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D V+++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTNAAKKLMADKIVRQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILCPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
A A+KLA+ I ++
Sbjct: 184 DAVALKLALTGAIKDQ 199
>gi|295091814|emb|CBK77921.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium cf.
saccharolyticum K10]
Length = 292
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PL + +P +D+ + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARMPLGSRNPDIDELAKGKGRMVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++F ++G VI N + GMG ++ + + + + R +G+ R VR
Sbjct: 63 ADERMNEQWTSWFKERGFHVIKINARTGMGLKQIHPMVQEACREKIERDRRRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + +PGVT+ +W+R + LE LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGNQWIRLNRTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q + LA I + D ++AA L L
Sbjct: 183 QTVGLNLAFIGSINDEIIDKTELAAELADFL 213
>gi|449881531|ref|ZP_21784505.1| ribosomal biogenesis GTPase [Streptococcus mutans SA38]
gi|449251169|gb|EMC49193.1| ribosomal biogenesis GTPase [Streptococcus mutans SA38]
Length = 283
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFKKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|229918611|ref|YP_002887257.1| GTP-binding protein HSR1-related [Exiguobacterium sp. AT1b]
gi|229470040|gb|ACQ71812.1| GTP-binding protein HSR1-related [Exiguobacterium sp. AT1b]
Length = 286
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 131/217 (60%), Gaps = 2/217 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++ ++LKL+DVVIE+ DAR+P S+ +P++D+ + R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARRQVTEKLKLIDVVIELVDARVPQSSRNPMVDEITAGKPRLIVLNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+AW ++ +V+ + + G +L A+ L + + + R KG P +R
Sbjct: 63 ADPVVTDAWLRALKREEVEVVAVDAKHSKGLKQLITGAQKLMKEKHDRMREKGRNPGPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRF-GKDLEFLDSPGIIPMRIS 278
A I+G PNVGKS+LINRL R + RPGVT+ +W++ G ++E LD+PGI+ +
Sbjct: 123 ALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWIKMKGGEMELLDTPGILWPKFE 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML-ARIP 314
DQ +LA I + ++ D+A V+ L AR P
Sbjct: 183 DQLVGYRLAATGAIKDEILNLDDIALYTVRELHARYP 219
>gi|449964553|ref|ZP_21811368.1| ribosomal biogenesis GTPase [Streptococcus mutans 15VF2]
gi|449172398|gb|EMB75026.1| ribosomal biogenesis GTPase [Streptococcus mutans 15VF2]
Length = 283
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAIGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|293374718|ref|ZP_06621026.1| ribosome biogenesis GTP-binding protein YlqF [Turicibacter
sanguinis PC909]
gi|325840619|ref|ZP_08167100.1| ribosome biogenesis GTP-binding protein YlqF [Turicibacter sp.
HGF1]
gi|292646632|gb|EFF64634.1| ribosome biogenesis GTP-binding protein YlqF [Turicibacter
sanguinis PC909]
gi|325490268|gb|EGC92601.1| ribosome biogenesis GTP-binding protein YlqF [Turicibacter sp.
HGF1]
Length = 290
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 123/193 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQW+PGH+AK ++++++L+L+D+V E+ DARIP S+++P+M++ + ++ ++++LN+ DM
Sbjct: 3 VQWFPGHMAKARRQIQEKLQLVDIVFELLDARIPYSSSNPMMNEIIKHKPKLIILNKVDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +QG I + +++ +K + + K ++KGL PR VR
Sbjct: 63 ADPNVTQQWLNYFKEQGQPAITIDALHQNAIKQITEASKEILKEKFAKEKAKGLRPRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+L+N L KR+ RPGVT+ +WV+ G++LE LD+PG++ + +
Sbjct: 123 AMILGIPNVGKSTLMNNLAKRKAAQTGDRPGVTKAQQWVKVGQELELLDTPGVLWPKFEE 182
Query: 280 QAAAIKLAICDDI 292
+ LA+ I
Sbjct: 183 KRVGYNLAVTGAI 195
>gi|359411414|ref|ZP_09203879.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
DL-VIII]
gi|357170298|gb|EHI98472.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
DL-VIII]
Length = 287
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P + + L + RI++LN+ D+
Sbjct: 3 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIKKLLEGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y ++ KV+ N G G + + +L + + + ++KG++ +R
Sbjct: 63 TDNRVTKEWINYLTEEEVKVLEVNCLKGDGLKNIKPMLLSLLKEKHDRLKAKGMVNITMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + +PGVT+ +W++ G +E LD+PG++ R D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNNIAKTGDKPGVTKSKQWIKTGMGIELLDTPGVLWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A+ LA I + D+ ++A LV+ L
Sbjct: 183 DETALNLAFTGAIKDEIMDIEELALKLVERL 213
>gi|323141924|ref|ZP_08076784.1| ribosome biogenesis GTP-binding protein YlqF [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413591|gb|EFY04450.1| ribosome biogenesis GTP-binding protein YlqF [Phascolarctobacterium
succinatutens YIT 12067]
Length = 286
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++ ++ Q+KL+DVV+E+ DARIP S+T+P++ LG++ +++ LN+ DM
Sbjct: 8 IQWFPGHMTKAKRMMESQIKLVDVVVEMLDARIPRSSTNPMLQDILGSKPKVIALNKIDM 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A + W G V + G G +L + A V K KG+ R VR
Sbjct: 68 ADKAQTDVWLEKIKHSGLPVCKIDCAPGKGVKQLISAVQLAAKPVIDKWLKKGVRNRPVR 127
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LINRL+ + AA +PGVTR +WV K LE LD+PG++ + D
Sbjct: 128 VMIVGIPNVGKSTLINRLVGKNKVMAADKPGVTRGQQWVTIAKGLELLDTPGVLWPKFDD 187
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ LA+ I E +D +L+ +L R
Sbjct: 188 PSVGFALAVTGAIKEDVFDREQAVELLLDLLIR 220
>gi|407477585|ref|YP_006791462.1| ribosome biogenesis GTPase A [Exiguobacterium antarcticum B7]
gi|407061664|gb|AFS70854.1| Ribosome biogenesis GTPase A [Exiguobacterium antarcticum B7]
Length = 288
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 1/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+ ++LKL+DVVIE+ DAR+P+S+ +P+++Q + R++VLN+ DM
Sbjct: 3 IQWFPGHMAKARREVMEKLKLIDVVIELVDARLPMSSRNPMVEQITAGKPRLIVLNKSDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W K G V+ + + G ++ A L D + + R KG P A+R
Sbjct: 63 ADARLTEQWMKALRKDGVDVVAVDAKHNKGLGQIHEGALRLMKDKHDRMRDKGRNPSAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGK-DLEFLDSPGIIPMRIS 278
A I+G PNVGKS+LINRL R + RPGVT+ +W++ ++E LD+PGI+ +
Sbjct: 123 ALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWIKMKTGEMELLDTPGILWPKFD 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ +LA I + ++ D+A ++ L
Sbjct: 183 DQMVGYRLAATGAIKDDILNIDDIALFAMREL 214
>gi|241890099|ref|ZP_04777397.1| ribosome biogenesis GTP-binding protein YlqF [Gemella haemolysans
ATCC 10379]
gi|241863721|gb|EER68105.1| ribosome biogenesis GTP-binding protein YlqF [Gemella haemolysans
ATCC 10379]
Length = 292
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 138/211 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+K++LKL+D+V E+ DAR PLS+ + +D+ + ++K+I++ N+ D+
Sbjct: 3 IQWFPGHMAKATREVKEKLKLVDIVFELVDARCPLSSHNMYLDEVVKDKKKIIIFNKIDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A+ W +YF +G V++++ + K+ AK ++ ++ +KG+ PRA+R
Sbjct: 63 CDRAETAKWKSYFENKGYTVVYTDAKNSNNLNKVIDKAKEELAEKIARQVAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ ++G PNVGKS+ IN+L+K+ + A +PGVT+ +W++ KD+E LD+PGI+ + +
Sbjct: 123 SMVIGVPNVGKSTFINKLIKKNVANTANKPGVTKKQQWLKLNKDIELLDTPGILMPKFDN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KL++ I + + DV+ L+++L
Sbjct: 183 QEIGKKLSLIGSIKDDITPLDDVSLYLIELL 213
>gi|399155736|ref|ZP_10755803.1| GTPase YlqF [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 306
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 115/193 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ K KEL QLK +DVV+E+RDARIP+S+ + ++ L +KRIL+ N+ ++
Sbjct: 23 INWYPGHMLKATKELAKQLKRVDVVLEMRDARIPVSSANHDFEKLLQQKKRILLFNKTNL 82
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF K T +F + ++ L++ L + R +G+ P +++
Sbjct: 83 ADEDTTRKWKAYFKKMDTPSLFVDALNKQNLQEILPLSRKLMQEKWSNFRKRGIRPPSLK 142
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PNVGKSSLINRL +R+ P PGVT+ W++ GKD+E LD+PGI+ +I +
Sbjct: 143 LLITGIPNVGKSSLINRLSRRKAAETGPTPGVTKHQDWIKLGKDVELLDTPGILWPKIEN 202
Query: 280 QAAAIKLAICDDI 292
+ A ++L I I
Sbjct: 203 REAGLRLTITGAI 215
>gi|24379433|ref|NP_721388.1| GTPase YlqF [Streptococcus mutans UA159]
gi|397649667|ref|YP_006490194.1| GTPase YlqF [Streptococcus mutans GS-5]
gi|449865443|ref|ZP_21779001.1| ribosomal biogenesis GTPase [Streptococcus mutans U2B]
gi|449869774|ref|ZP_21780268.1| ribosomal biogenesis GTPase [Streptococcus mutans 8ID3]
gi|449889171|ref|ZP_21787514.1| ribosomal biogenesis GTPase [Streptococcus mutans SA41]
gi|449892459|ref|ZP_21788463.1| ribosomal biogenesis GTPase [Streptococcus mutans SF12]
gi|449914950|ref|ZP_21795950.1| ribosomal biogenesis GTPase [Streptococcus mutans 15JP3]
gi|449936859|ref|ZP_21804235.1| ribosomal biogenesis GTPase [Streptococcus mutans 2ST1]
gi|449941225|ref|ZP_21805455.1| ribosomal biogenesis GTPase [Streptococcus mutans 11A1]
gi|449985491|ref|ZP_21819700.1| ribosomal biogenesis GTPase [Streptococcus mutans NFSM2]
gi|449989503|ref|ZP_21821083.1| ribosomal biogenesis GTPase [Streptococcus mutans NVAB]
gi|450041972|ref|ZP_21837577.1| ribosomal biogenesis GTPase [Streptococcus mutans T4]
gi|450077403|ref|ZP_21850403.1| ribosomal biogenesis GTPase [Streptococcus mutans N3209]
gi|450080998|ref|ZP_21851443.1| ribosomal biogenesis GTPase [Streptococcus mutans N66]
gi|450115830|ref|ZP_21864142.1| ribosomal biogenesis GTPase [Streptococcus mutans ST1]
gi|450121367|ref|ZP_21866266.1| ribosomal biogenesis GTPase [Streptococcus mutans ST6]
gi|450154162|ref|ZP_21877579.1| ribosomal biogenesis GTPase [Streptococcus mutans 21]
gi|24377367|gb|AAN58694.1|AE014939_1 putative GTP-binding protein [Streptococcus mutans UA159]
gi|392603236|gb|AFM81400.1| GTPase YlqF [Streptococcus mutans GS-5]
gi|449152269|gb|EMB55980.1| ribosomal biogenesis GTPase [Streptococcus mutans 11A1]
gi|449157338|gb|EMB60782.1| ribosomal biogenesis GTPase [Streptococcus mutans 15JP3]
gi|449157671|gb|EMB61107.1| ribosomal biogenesis GTPase [Streptococcus mutans 8ID3]
gi|449165184|gb|EMB68207.1| ribosomal biogenesis GTPase [Streptococcus mutans 2ST1]
gi|449179091|gb|EMB81319.1| ribosomal biogenesis GTPase [Streptococcus mutans NFSM2]
gi|449182465|gb|EMB84489.1| ribosomal biogenesis GTPase [Streptococcus mutans NVAB]
gi|449197292|gb|EMB98480.1| ribosomal biogenesis GTPase [Streptococcus mutans T4]
gi|449211208|gb|EMC11622.1| ribosomal biogenesis GTPase [Streptococcus mutans N3209]
gi|449215759|gb|EMC15938.1| ribosomal biogenesis GTPase [Streptococcus mutans N66]
gi|449227644|gb|EMC27056.1| ribosomal biogenesis GTPase [Streptococcus mutans ST1]
gi|449229232|gb|EMC28556.1| ribosomal biogenesis GTPase [Streptococcus mutans ST6]
gi|449238008|gb|EMC36795.1| ribosomal biogenesis GTPase [Streptococcus mutans 21]
gi|449250396|gb|EMC48458.1| ribosomal biogenesis GTPase [Streptococcus mutans SA41]
gi|449256080|gb|EMC53914.1| ribosomal biogenesis GTPase [Streptococcus mutans SF12]
gi|449264294|gb|EMC61640.1| ribosomal biogenesis GTPase [Streptococcus mutans U2B]
Length = 283
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKENLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|283798047|ref|ZP_06347200.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
M62/1]
gi|291074351|gb|EFE11715.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
M62/1]
Length = 292
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PL + +P +D+ + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARMPLGSRNPDIDELARGKGRMVLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++F ++G VI N + GMG ++ + + + + R +G+ R VR
Sbjct: 63 ADERMNEQWTSWFKERGFHVIKINARTGMGLKQIHPMVQEACREKIERDRRRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + +PGVT+ +W+R + LE LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGNQWIRLNRTLELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q + LA I + D ++AA L L
Sbjct: 183 QTVGLNLAFIGSINDEIIDKTELAAELADFL 213
>gi|317495782|ref|ZP_07954145.1| ribosome biogenesis GTP-binding protein YlqF [Gemella morbillorum
M424]
gi|316913959|gb|EFV35442.1| ribosome biogenesis GTP-binding protein YlqF [Gemella morbillorum
M424]
Length = 292
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 138/213 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+K++LKL+D+V E+ DAR PLS+ + +D+ + ++K+I++ N+ D+
Sbjct: 3 IQWFPGHMAKATREVKEKLKLVDIVFELVDARCPLSSHNMYLDEVVKDKKKIIIFNKIDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF K+G V++++ + K+ AK ++ ++ +KG+ PRA+R
Sbjct: 63 CDRTETAKWKNYFEKKGYTVVYTDAKNSNNLNKVIDKAKEELAEKIARQVAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ ++G PNVGKS+ IN+L+K+ + A +PGVT+ +W++ KD+E LD+PGI+ + +
Sbjct: 123 SMVIGVPNVGKSTFINKLIKKNVANTANKPGVTKKQQWLKLNKDIELLDTPGILMPKFDN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KL++ I + + DV+ L+++L +
Sbjct: 183 QEIGKKLSLIGSIKDDITPLDDVSLYLIELLKQ 215
>gi|329767414|ref|ZP_08258939.1| ribosome biogenesis GTP-binding protein YlqF [Gemella haemolysans
M341]
gi|328836103|gb|EGF85794.1| ribosome biogenesis GTP-binding protein YlqF [Gemella haemolysans
M341]
Length = 292
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 137/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+K++LKL+D+V E+ DAR PLS+ + +D+ + ++K+I++ N+ D+
Sbjct: 3 IQWFPGHMAKATREVKEKLKLVDIVFELVDARCPLSSHNMYLDEVVKDKKKIIIFNKIDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A+ W YF +G V++++ + K+ AK ++ ++ +KG+ PRA+R
Sbjct: 63 CDRAETAKWKNYFENKGYTVVYTDAKNSNNLNKVIDKAKEELAEKIARQVAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ ++G PNVGKS+ IN+L+K+ + A +PGVT+ +W++ KD+E LD+PGI+ + +
Sbjct: 123 SMVIGVPNVGKSTFINKLIKKNIANTANKPGVTKKQQWLKLNKDIELLDTPGILMPKFDN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KL++ I + + DV+ L+++L
Sbjct: 183 QEIGKKLSLIGSIKDDITPLDDVSLYLIELL 213
>gi|313892688|ref|ZP_07826271.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp. oral
taxon 158 str. F0412]
gi|313442779|gb|EFR61188.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp. oral
taxon 158 str. F0412]
Length = 301
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVITELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG V+ + + G G KL + L+ + + +KG+ R+VR
Sbjct: 67 ADPKATKEWTEFFTKQGITVLAIDSKSGKGNKKLISTVERLSKPIIDRWVAKGIRSRSVR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK+LE LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
Q AA +LA+ G S DV D+ ++ Q+L + T
Sbjct: 187 QRAAARLAMT---GAVSDDVYDLEHVMKQLLNHLLT 219
>gi|281491814|ref|YP_003353794.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. lactis
KF147]
gi|281375528|gb|ADA65038.1| Ribosomal biogenesis GTPase [Lactococcus lactis subsp. lactis
KF147]
Length = 282
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 121/193 (62%), Gaps = 6/193 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D
Sbjct: 3 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLGQIIGDKPRIIALNKAD- 61
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+AD NA W YF +QG + N + +L+ AK L +D + +G+
Sbjct: 62 --LADSNAVAQWIEYFDEQGFITLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHT 119
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ +
Sbjct: 120 TLRTMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPK 179
Query: 277 ISDQAAAIKLAIC 289
DQ +KLA+
Sbjct: 180 FEDQLVGLKLALT 192
>gi|366053163|ref|ZP_09450885.1| GTP-binding protein YlqF [Lactobacillus suebicus KCTC 3549]
Length = 289
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 125/214 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DAR+P S+ +P + + +G++ +L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMSLVDIVFELVDARLPYSSLNPEIKKAMGDKPHVLIMTKLDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YF G VI + + +++ A+ + SD K KGL RA+R
Sbjct: 64 ADNNITNDWINYFTDHGLPVIAVDSRDRKVASIVTKKAQEVLSDKIAKNEDKGLSKRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+KR + RPGVT +W+R +LE LD+PG++ +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKRNVANTGNRPGVTTGQQWLRLSSNLELLDTPGVLWPKFQT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q +KLA+ I + + DVA + + ++
Sbjct: 184 QEIGVKLALSGTIKDSLFPKDDVALFAIHHIRQV 217
>gi|125624005|ref|YP_001032488.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854353|ref|YP_006356597.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. cremoris
NZ9000]
gi|124492813|emb|CAL97768.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300070775|gb|ADJ60175.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 282
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D+
Sbjct: 3 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPMSSRNPMLGQIIGDKPRIIALNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF +QG + N + +L+ AK L +D + +G+ +R
Sbjct: 63 ADSSKVAEWIEYFDEQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTTLR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ + D
Sbjct: 123 TMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 183 QLVGLKLALT 192
>gi|269798034|ref|YP_003311934.1| GTP-binding protein HSR1-like protein [Veillonella parvula DSM
2008]
gi|416999180|ref|ZP_11939849.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella parvula
ACS-068-V-Sch12]
gi|269094663|gb|ACZ24654.1| GTP-binding protein HSR1-related protein [Veillonella parvula DSM
2008]
gi|333977333|gb|EGL78192.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella parvula
ACS-068-V-Sch12]
Length = 301
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVITELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG V+ + + G G KL + L+ + + +KG+ R+VR
Sbjct: 67 ADPKATKEWTEFFTKQGITVLAIDSKSGKGNKKLISTVERLSKPIIDRWVAKGIRSRSVR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK+LE LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA +LA+ I + YD+ V L+ L
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNYL 217
>gi|312143697|ref|YP_003995143.1| ribosome biogenesis GTP-binding protein YlqF [Halanaerobium
hydrogeniformans]
gi|311904348|gb|ADQ14789.1| ribosome biogenesis GTP-binding protein YlqF [Halanaerobium
hydrogeniformans]
Length = 285
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++ LKD LKL+D++IEV DAR P ST +P + + ++KR+ VLN++D+
Sbjct: 2 IQWYPGHMAKAKRILKDDLKLVDLIIEVLDARAPYSTQNPDLQSLVKDQKRVAVLNKKDL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G V+ N G G +L L L ++ K KG R +R
Sbjct: 62 ADPELNQKWLNYF--KGEAVLL-NSITGEGVGELKNLLNGLHYEITNKLSKKGRKARRIR 118
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LIN L + A +PGVTR +WV K + LD+PGI+ SD
Sbjct: 119 AMIIGIPNVGKSALINLLAGSKAANIADKPGVTRGRQWVNVSKKVRLLDTPGILWPSFSD 178
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ A KLA+ + +D A L++ + I
Sbjct: 179 EDTAYKLALTGAVSNDVFDFELAAYKLIKFIKNI 212
>gi|313889406|ref|ZP_07823054.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudoporcinus SPIN 20026]
gi|416852581|ref|ZP_11909726.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudoporcinus LQ 940-04]
gi|313122238|gb|EFR45329.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudoporcinus SPIN 20026]
gi|356740070|gb|EHI65302.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudoporcinus LQ 940-04]
Length = 287
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 125/204 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W ++ +G K + N + K++ AKAL SD K R +G+ +R
Sbjct: 64 ADQSRTKEWQQFYESKGIKTLAINSKEQSTVKKVTDAAKALMSDKITKLRQRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKVAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q +KLA+ I ++ + DV
Sbjct: 184 QGVGLKLALTGAIKDQLLPLDDVT 207
>gi|417917088|ref|ZP_12560650.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis SK236]
gi|342830737|gb|EGU65062.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis SK236]
Length = 283
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K ++++D LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQDSLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMILNKGDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 64 ADPVATKEWQDYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 EEVALKLALTGAIKDQ 199
>gi|294791914|ref|ZP_06757062.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp.
6_1_27]
gi|294457144|gb|EFG25506.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp.
6_1_27]
Length = 301
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVITELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG V+ + + G G KL + L+ + + +KG+ R+VR
Sbjct: 67 ADPKATKEWTEFFTKQGIIVLAIDSKSGKGNKKLISTVERLSKPIIDRWVAKGIRSRSVR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK+LE LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA +LA+ I + YD+ V L+ L
Sbjct: 187 QCAAARLAMTGAISDDVYDLEHVIKQLLNYL 217
>gi|450011007|ref|ZP_21828933.1| ribosomal biogenesis GTPase [Streptococcus mutans A19]
gi|450023399|ref|ZP_21830596.1| ribosomal biogenesis GTPase [Streptococcus mutans U138]
gi|449189790|gb|EMB91418.1| ribosomal biogenesis GTPase [Streptococcus mutans A19]
gi|449193495|gb|EMB94877.1| ribosomal biogenesis GTPase [Streptococcus mutans U138]
Length = 283
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLIKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKENLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|406669367|ref|ZP_11076644.1| ribosome biogenesis GTP-binding protein YlqF [Facklamia ignava CCUG
37419]
gi|405583402|gb|EKB57343.1| ribosome biogenesis GTP-binding protein YlqF [Facklamia ignava CCUG
37419]
Length = 290
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 117/190 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++ ++L ++D+V+E+ DARIP S+ +P++D+ +G+++R++ LN+ D+
Sbjct: 3 IQWYPGHMAKAKRLAIEKLSMVDIVVELIDARIPQSSRNPVIDEIIGSKRRVIALNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F QG I + Q G +L L + + V ++ +KG+L + +R
Sbjct: 63 ADPVATREWVQTFQSQGHAAIAIDAQHQKGIRQLKELIRKEMAPVFEEQAAKGILSKNIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LINR + + +PGVT+ +W++ +D E LD+PGI+ + D
Sbjct: 123 LMILGIPNVGKSTLINRFVGKNQAITGNKPGVTKAQRWLKIDRDFELLDTPGILWPKFED 182
Query: 280 QAAAIKLAIC 289
Q +KLAI
Sbjct: 183 QTIGMKLAIT 192
>gi|365841786|ref|ZP_09382840.1| ribosome biogenesis GTP-binding protein YlqF [Flavonifractor
plautii ATCC 29863]
gi|364576938|gb|EHM54233.1| ribosome biogenesis GTP-binding protein YlqF [Flavonifractor
plautii ATCC 29863]
Length = 285
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 125/206 (60%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+ KT ++++ LKL+D+V E+ DARIP+S+ +P +D+ +G + R++VLNR D A
Sbjct: 1 MTKTRRQIQADLKLVDLVAEIIDARIPISSRNPDIDELVGEKPRLIVLNRADQADPAMNR 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
W +F +QG V+ +N + G G + S + + + + ++KGL+ R VRA +VG P
Sbjct: 61 VWTDWFRRQGWAVLETNARDGKGVGQFSTVIRQALKEKLEQWKAKGLVGRPVRAMVVGVP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+ IN++ KR+ A RPGVTR +WV LE LD+PGI+ + D+ I L
Sbjct: 121 NVGKSTFINQVAKRKSAKAGNRPGVTRGKQWVSVDAGLELLDTPGILWPKFEDETTGIHL 180
Query: 287 AICDDIGERSYDVADVAAILVQMLAR 312
A + + D+ +A L+++LAR
Sbjct: 181 AFTGAVKDEIMDLETLACHLIELLAR 206
>gi|357235296|ref|ZP_09122639.1| ribosomal biogenesis GTPase [Streptococcus criceti HS-6]
gi|356883278|gb|EHI73478.1| ribosomal biogenesis GTPase [Streptococcus criceti HS-6]
Length = 283
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 120/190 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++LVLN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLNKIVGDKPKLLVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + +L+ AK+L +D + + KG+ +R
Sbjct: 64 ADPLLIKEWQSYFENQGLKTLLINAKDQSTVKRLTEAAKSLMADKLERLKKKGINKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 184 QLVGLKLALT 193
>gi|184155372|ref|YP_001843712.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|260662115|ref|ZP_05863011.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
fermentum 28-3-CHN]
gi|183226716|dbj|BAG27232.1| GTPase [Lactobacillus fermentum IFO 3956]
gi|260553498|gb|EEX26390.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
fermentum 28-3-CHN]
Length = 290
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+Q+ L+D+V E+ DAR+P ST +P +++ G++ R+L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIKEQMPLVDIVFELVDARVPYSTQNPEINRMAGDKPRLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + G V+ + + +++ A+ + D R+KG+ RA+R
Sbjct: 64 ADPTTTAHWIDYFEQNGQPVLALDSRAHQVAKQVTVKAQQILKDQLAAERAKGMQKRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R DLE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSADLELLDTPGVLWPKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A LA+ I + Y DVA + L
Sbjct: 184 QTQAKMLALSGAIKDSLYPKDDVAIFALDYL 214
>gi|374673347|dbj|BAL51238.1| GTP-binding protein [Lactococcus lactis subsp. lactis IO-1]
Length = 282
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 120/193 (62%), Gaps = 6/193 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D
Sbjct: 3 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLGQIIGDKPRIIALNKAD- 61
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+AD NA W YF QG + N + +L+ AK L +D + +G+
Sbjct: 62 --LADSNAVAQWIEYFDDQGFITLAINSKEEYTAKRLTVAAKKLMTDKVAHDKERGIAHT 119
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ +
Sbjct: 120 TLRTMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPK 179
Query: 277 ISDQAAAIKLAIC 289
DQ +KLA+
Sbjct: 180 FEDQLVGLKLALT 192
>gi|410727082|ref|ZP_11365305.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
Maddingley MBC34-26]
gi|410599417|gb|EKQ53970.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
Maddingley MBC34-26]
Length = 287
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +++ L + RI++LN+ D+
Sbjct: 3 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIEKLLEGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y + KV+ N G G + L + + + ++KG++ +R
Sbjct: 63 TDSKVTKEWINYLTEDDVKVLEVNCLKGDGLKNIKPTLLTLLKEKHDRLKAKGMVNITMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + RPGVT+ +W++ G +E LD+PG++ + D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNNIAKTGDRPGVTKSKQWIKTGIGIEMLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A+ LA I + D+ ++A LV+ L
Sbjct: 183 DETALNLAFTGAIKDEIMDIEELALKLVERL 213
>gi|227515158|ref|ZP_03945207.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
gi|227086490|gb|EEI21802.1| GTP-binding protein [Lactobacillus fermentum ATCC 14931]
Length = 291
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+Q+ L+D+V E+ DAR+P ST +P +++ G++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKALRQIKEQMPLVDIVFELVDARVPYSTQNPEINRMAGDKPRLLIMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + G V+ + + +++ A+ + D R+KG+ RA+R
Sbjct: 65 ADPTTTAHWIDYFEQNGQPVLALDSRAHQVAKQVTVKAQQILKDQLAAERAKGMQKRAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R DLE LD+PG++ + +
Sbjct: 125 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSADLELLDTPGVLWPKFAT 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A LA+ I + Y DVA + L
Sbjct: 185 QTQAKMLALSGAIKDSLYPKDDVAIFALDYL 215
>gi|347532233|ref|YP_004838996.1| ribosomal biogenesis GTPase [Roseburia hominis A2-183]
gi|345502381|gb|AEN97064.1| ribosomal biogenesis GTPase [Roseburia hominis A2-183]
Length = 285
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 129/210 (61%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLSSRNPDIDELGRNKARLILMNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W+ YF K+G V+ + + G +++ + + + R +G++ R VRA
Sbjct: 64 DEEAGKLWSAYFQKKGYYVVSLDSRNRNGMKQVTAVVMEACKEKIERDRKRGIMNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSYAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
+KLA+ I + ++ +++ L+++L
Sbjct: 184 TVGLKLALIGAIKDEILNIDELSLELIKVL 213
>gi|167768003|ref|ZP_02440056.1| hypothetical protein CLOSS21_02546 [Clostridium sp. SS2/1]
gi|317498403|ref|ZP_07956698.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 5_1_63FAA]
gi|429761259|ref|ZP_19293689.1| ribosome biogenesis GTP-binding protein YlqF [Anaerostipes hadrus
DSM 3319]
gi|167710332|gb|EDS20911.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
SS2/1]
gi|291561005|emb|CBL39805.1| ribosome biogenesis GTP-binding protein YlqF [butyrate-producing
bacterium SSC/2]
gi|316894297|gb|EFV16484.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 5_1_63FAA]
gi|429184283|gb|EKY25306.1| ribosome biogenesis GTP-binding protein YlqF [Anaerostipes hadrus
DSM 3319]
Length = 286
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 123/210 (58%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D++IE+ DARIPLS+ +P +DQ N+ R+++LN+ DM
Sbjct: 4 QWYPGHMTKAKRMMQENMKLIDIMIELVDARIPLSSRNPDIDQLAANKSRLILLNKTDMA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W YF ++G V +N + G G + + + R +G+ R +RA
Sbjct: 64 DERVTAQWEEYFKEKGFYVARTNARSGKGVKGTQAIVMDACKEKLERDRKRGIKNRPIRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
I G PNVGKS+ IN L+ + +PGVT+ +W++ K++E LD+PGI+ + DQ
Sbjct: 124 MIAGIPNVGKSTFINSLVGKACTKTGNKPGVTKGKQWIKLNKNIELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA+ I + + ++A L++ L
Sbjct: 184 QVGLRLALIGSIRDEILNQDEMAIELIEYL 213
>gi|238019254|ref|ZP_04599680.1| hypothetical protein VEIDISOL_01118 [Veillonella dispar ATCC 17748]
gi|237863953|gb|EEP65243.1| hypothetical protein VEIDISOL_01118 [Veillonella dispar ATCC 17748]
Length = 306
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 12 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVITELVGQKPHIVLLNKVDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG V+ + + G G KL + L+ + + +KG+ R+VR
Sbjct: 72 ADPKATKEWTEFFTKQGITVLAIDSKSGKGNKKLISTVERLSKPIIDRWVAKGIRSRSVR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK+LE LD+PG++ ++ D
Sbjct: 132 IIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVLWPKLED 191
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
Q AA +LA+ G S DV D+ ++ Q+L + T
Sbjct: 192 QRAAARLAMT---GAVSDDVYDLEHVMKQLLNHLLT 224
>gi|449898038|ref|ZP_21790366.1| ribosomal biogenesis GTPase [Streptococcus mutans R221]
gi|449260334|gb|EMC57836.1| ribosomal biogenesis GTPase [Streptococcus mutans R221]
Length = 283
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 127/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENFKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + N + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKENLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|358067000|ref|ZP_09153486.1| ribosome biogenesis GTP-binding protein YlqF [Johnsonella ignava
ATCC 51276]
gi|356694849|gb|EHI56504.1| ribosome biogenesis GTP-binding protein YlqF [Johnsonella ignava
ATCC 51276]
Length = 295
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 122/199 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +++ +K++D++IE+RDARIPL++++P + + R++VLN+ D+
Sbjct: 3 IQWYPGHMTKAMRAIQEDIKIVDIIIEMRDARIPLASSNPDIAVLGQGKARVIVLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ AWA YF KQG IF++ + KL+ L + + + +G+ R VR
Sbjct: 63 SNEQINKAWAQYFRKQGCSCIFADSRQKGVVRKLTELLEEASKAKRERDLKRGISNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+LIN + + +PGVT+ +W+R K +E LD+PG++ +I +
Sbjct: 123 AIVLGIPNVGKSTLINSIAGKGSAKTGNKPGVTKGNQWIRLNKQVELLDTPGMLMPKIEN 182
Query: 280 QAAAIKLAICDDIGERSYD 298
+ A+KLA + + +D
Sbjct: 183 EETAVKLAFIGTVNDLVFD 201
>gi|258645843|ref|ZP_05733312.1| ribosome biogenesis GTP-binding protein YlqF [Dialister invisus DSM
15470]
gi|260403215|gb|EEW96762.1| ribosome biogenesis GTP-binding protein YlqF [Dialister invisus DSM
15470]
Length = 285
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 126/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT++ + + LK +DV E+ DARIPLS+ +P++++ L + RI++LN+ D+
Sbjct: 3 IQWFPGHMAKTKRLIIEHLKAVDVAAELLDARIPLSSANPMVEELLSGKPRIVILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +Y+ ++G + + G K RL K A + K + +GL R+VR
Sbjct: 63 ADPGMTKAWESYYKRKGVAAVSMSCGNGKDKKKFLRLIKEAAGPMLEKWKLRGLKTRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN + A PG TR +WVR + L+ LD+PG++ + D
Sbjct: 123 IMILGIPNVGKSTLINFISGTAAARTANTPGHTRGKQWVRLSQGLDLLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q AA++LA I +D V L+++LAR
Sbjct: 183 QVAALRLAATGAIAGDVFDADTVVPELMRVLAR 215
>gi|346314321|ref|ZP_08855842.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345906679|gb|EGX76403.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 288
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 129/205 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++++L ++D+VIE+RDARIP ++ +P++++ N+ R++VL+++D
Sbjct: 8 IQWFPGHMTKAKREMQEKLNMVDMVIELRDARIPSASKNPMIEELCQNKPRLIVLSKKDK 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W + + T+V+ + T ++ ++ L + + +G+ PRA+R
Sbjct: 68 ADAAATKLWCSALQNETTRVVALDILKENITARIVEESRLLMQAKIERMKRRGIRPRAIR 127
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ INR+ K+++ RPGVTR L+W + ++LE LD+PG++ + D
Sbjct: 128 AMVVGVPNVGKSTFINRISKKKVAVTGDRPGVTRALQWSKVNQNLELLDTPGVLWPKFED 187
Query: 280 QAAAIKLAICDDIGERSYDVADVAA 304
+ + LAI I + + ++AA
Sbjct: 188 ETVGVLLAITGAIRDEILPLEEIAA 212
>gi|357637618|ref|ZP_09135493.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus macacae
NCTC 11558]
gi|357586072|gb|EHJ53275.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus macacae
NCTC 11558]
Length = 283
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 121/193 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++LVLN+ D+
Sbjct: 4 IQWFPGHMSKARRQIQENLKYIDFVTILADARLPLSSQNPMLNKIVGDKSKLLVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ K+G KV+ N + +++ AKAL S KG+ +R
Sbjct: 64 ADKQETAKWCAYYKKEGLKVLAINAKEQGVIKQINGAAKALMSAKFEHLHKKGIQSNMMR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+L+NRL +++ +PG+T+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNVGKSTLMNRLAGKKIASVGNKPGITKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDI 292
Q +KLA+ I
Sbjct: 184 QFVGLKLALTGAI 196
>gi|282850262|ref|ZP_06259641.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella parvula
ATCC 17745]
gi|282579755|gb|EFB85159.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella parvula
ATCC 17745]
Length = 301
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVIFELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG V+ + + G G KL + L+ + + +KG+ R+VR
Sbjct: 67 ADPKATKEWTEFFTKQGITVLAIDSKSGKGNKKLLSTVEHLSKPIIDRWVAKGIRSRSVR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK+LE LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA +LA+ I + YD+ V L+ L
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNYL 217
>gi|414074437|ref|YP_006999654.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413974357|gb|AFW91821.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 282
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 117/190 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D+
Sbjct: 3 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPMSSRNPMLGQIIGDKPRIIALNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + N + +L+ AK L +D + +G+ +R
Sbjct: 63 ADSSKVAEWIEYFDGQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTTLR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ + D
Sbjct: 123 TMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 183 QLVGLKLALT 192
>gi|313901086|ref|ZP_07834574.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp. HGF2]
gi|312954044|gb|EFR35724.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp. HGF2]
Length = 288
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 131/208 (62%), Gaps = 6/208 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++++L ++D+VIE+RDARIP ++ +P++++ N+ R++VL+++D
Sbjct: 8 IQWFPGHMTKAKREMQEKLNMVDMVIELRDARIPSASKNPMIEELCQNKPRLIVLSKKDK 67
Query: 160 ISMADRNAWATYFAKQGTKVI---FSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
A W + + T+V+ + G ++ SRL A +KRR G+ PR
Sbjct: 68 ADAAATKLWCSALQNETTRVVALDILKENIIPGIVEESRLLMQ-AKIERMKRR--GIRPR 124
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
A+RA +VG PNVGKS+ INR+ K+++ RPGVTR L+W + ++LE LD+PG++ +
Sbjct: 125 AIRAMVVGVPNVGKSTFINRISKKKVAVTGDRPGVTRALQWSKVNQNLELLDTPGVLWPK 184
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAA 304
D+ + LAI I + + ++AA
Sbjct: 185 FEDETVGVLLAITGAIRDEILPLEEIAA 212
>gi|449950694|ref|ZP_21808347.1| ribosomal biogenesis GTPase [Streptococcus mutans 11SSST2]
gi|449167009|gb|EMB69917.1| ribosomal biogenesis GTPase [Streptococcus mutans 11SSST2]
Length = 283
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 128/213 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG K + + + K++ AK L +D VK R +G+ +R
Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVSSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + +
Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA+ I + + ++ + R
Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKR 216
>gi|357053018|ref|ZP_09114122.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
clostridioforme 2_1_49FAA]
gi|355386443|gb|EHG33483.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
clostridioforme 2_1_49FAA]
Length = 288
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 128/219 (58%), Gaps = 3/219 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PLS+ +P +D + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDMKLIDLVIELVDARVPLSSRNPDIDDLGAGKARMVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKR-RSKGLLPRAV 218
WA +F +G V+ + + GT+K + A ++R R +G+L R +
Sbjct: 63 ADEGQNARWAAWFEDKGIHVVKIDAR-NKGTLKQVQSVIQEACKEKIERDRRRGILNRPI 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R +VG PNVGKS+ IN R +PGVT+ +W+R K LE LD+PGI+ R
Sbjct: 122 RTMVVGIPNVGKSTFINSFAGRACAKTGNKPGVTKGNQWIRLNKTLELLDTPGILWPRFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML-ARIPTV 316
DQ +KLA+ I ++ + ++A L++ L R P V
Sbjct: 182 DQQVGLKLALIGSINDQILNKDELAWELIRFLKKRYPQV 220
>gi|385838407|ref|YP_005876037.1| 50S ribosomal subunit maturation GTPase RbgA [Lactococcus lactis
subsp. cremoris A76]
gi|358749635|gb|AEU40614.1| 50S ribosomal subunit maturation GTPase RbgA [Lactococcus lactis
subsp. cremoris A76]
Length = 282
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 117/190 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D+
Sbjct: 3 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPMSSRNPMLGQIIGDKPRIIALNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + N + +L+ AK L +D + +G+ +R
Sbjct: 63 ADSSKVAEWIEYFDGQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTTLR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ + D
Sbjct: 123 TMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKFED 182
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 183 QLVGLKLALT 192
>gi|385261963|ref|ZP_10040078.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
SK643]
gi|385191704|gb|EIF39116.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
SK643]
Length = 283
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 124/196 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+L +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGILIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|116512137|ref|YP_809353.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. cremoris
SK11]
gi|116107791|gb|ABJ72931.1| Ras superfamily GTP-binding protein YlqF [Lactococcus lactis subsp.
cremoris SK11]
Length = 283
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 117/190 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPMSSRNPMLGQIIGDKPRIVALNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + N + +L+ AK L +D + +G+ +R
Sbjct: 64 ADSSKVAEWIEYFDGQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTTLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 184 QLVGLKLALT 193
>gi|409387361|ref|ZP_11239591.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Lactococcus raffinolactis 4877]
gi|399205462|emb|CCK20506.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Lactococcus raffinolactis 4877]
Length = 291
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 124/190 (65%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D+V+E+ DAR+PLS+ +P++D+ +G + R++++N++D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDLVMELVDARLPLSSRNPMLDKIIGTKPRLVIINKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + N + KL++ AK + ++ + +G+ +A+R
Sbjct: 64 GDDLEIQKWVHYFEAQGILAVKINAKEQQTVKKLTKAAKEVLAEKLKRASERGIQNKAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+L+NRL +++ +PGVT+ +W++ ++LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNVGKSTLMNRLAGKKIAITGNKPGVTKGQQWLKTNEELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
Q +KLA+
Sbjct: 184 QRVGLKLALT 193
>gi|15673276|ref|NP_267450.1| ribosomal biogenesis GTPase [Lactococcus lactis subsp. lactis
Il1403]
gi|385830824|ref|YP_005868637.1| Ribosome biogenesis GTPase A [Lactococcus lactis subsp. lactis
CV56]
gi|12724271|gb|AAK05392.1|AE006361_8 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
gi|326406832|gb|ADZ63903.1| Ribosome biogenesis GTPase A [Lactococcus lactis subsp. lactis
CV56]
Length = 282
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 6/193 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D VIE+ DAR+P+S+ +P++ Q +G++ RI+ LN+ D
Sbjct: 3 IQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLGQIIGDKPRIIALNKAD- 61
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+AD NA W +F +QG + N + +L+ AK L +D + +G+
Sbjct: 62 --LADSNAVAQWIEFFDEQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHT 119
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R I+G PN GKS+L+NRL +++ RPGVT+ +W+R K+LE LD+PGI+ +
Sbjct: 120 TLRTMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPK 179
Query: 277 ISDQAAAIKLAIC 289
DQ +KLA+
Sbjct: 180 FEDQLVGLKLALT 192
>gi|187934506|ref|YP_001885449.1| ribosomal biogenesis GTPase [Clostridium botulinum B str. Eklund
17B]
gi|187722659|gb|ACD23880.1| GTP-binding protein [Clostridium botulinum B str. Eklund 17B]
Length = 285
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +D L + RI++LN+ D+
Sbjct: 3 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIDSLLQGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + K KV+ N G G + + +L + + + R+KG++ R
Sbjct: 63 TEGKVTKEWIKHLTKDDVKVLEVNCLKGDGLKAIKPMLLSLLKEKHDRLRAKGMVNITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + +PGVT+ +W++ +E LD+PG++ R D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNSIAKTGDKPGVTKSKQWIKTSIGIELLDTPGVLWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A+ LA I + D+ +++ LV+ L
Sbjct: 183 EETALNLAFTGAIKDEIMDIEELSYKLVERL 213
>gi|260887867|ref|ZP_05899130.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sputigena
ATCC 35185]
gi|330838732|ref|YP_004413312.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sputigena
ATCC 35185]
gi|260862373|gb|EEX76873.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sputigena
ATCC 35185]
gi|329746496|gb|AEB99852.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sputigena
ATCC 35185]
Length = 302
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 123/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +++ LKL+DVV+E+ DARIP ++++P++ + +G++ R++ LN+ D+
Sbjct: 13 IQWYPGHMKKARELVEENLKLVDVVVELLDARIPAASSNPMLREIIGDKPRVVALNKRDL 72
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F + + + G G +L L + A + SKG+ R R
Sbjct: 73 ADENMTRRWLEHFRAKKIPAVALDSVSGKGMKELLTLIEREAKYRTERLVSKGVAARKAR 132
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL A +PGVTR +W+R G D++ LD+PGI+ + D
Sbjct: 133 VMILGIPNVGKSSLINRLAGAAKAKTADKPGVTRAKQWIRIGADVDLLDTPGILWPKFED 192
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+KLA + + YD+ VA +L+ L R
Sbjct: 193 PRVGLKLAFTGAVNDEIYDLESVAHLLLATLRR 225
>gi|260588680|ref|ZP_05854593.1| ribosome biogenesis GTP-binding protein YlqF [Blautia hansenii DSM
20583]
gi|331081971|ref|ZP_08331099.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 6_1_63FAA]
gi|260541155|gb|EEX21724.1| ribosome biogenesis GTP-binding protein YlqF [Blautia hansenii DSM
20583]
gi|330405566|gb|EGG85096.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 281
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 115/192 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D++IEV DARIP S+ +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDLIIEVVDARIPFSSRNPDIDELGKNKARLILLNKSDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ WA YF +G V+ N + G G + + + + R +G++ R +RA
Sbjct: 64 DERENEKWAEYFKSKGYYVVKLNAKSGAGIKGVLPVVMESCKEKLERDRKRGIINRPIRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINAFAGKACTKTGNKPGVTKGKQWIRINKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDI 292
+ KLA+ I
Sbjct: 184 SVGAKLAMVGSI 195
>gi|373452163|ref|ZP_09544081.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium sp.
3_1_31]
gi|371967595|gb|EHO85066.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium sp.
3_1_31]
Length = 286
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 128/205 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++D++K++D+VIE+RDARIP ++ +P++++ + + R+++L+++D
Sbjct: 8 IQWFPGHMTKAKREMQDKMKMVDLVIELRDARIPNASKNPMIEELIQQKPRLIILSKKDK 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW + T V+ + T K+ + + L + +G+ PRA+R
Sbjct: 68 ADAAITKAWIQTLSNASTMVLALDIITENITPKIVKAVQTLMQAKIERMIRRGMKPRAMR 127
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ K+++ RPGVT+ L+W + KDLE LD+PG++ + D
Sbjct: 128 AMVVGVPNVGKSTFINKISKKKIAVTGDRPGVTKSLQWSKINKDLELLDTPGVLWPKFED 187
Query: 280 QAAAIKLAICDDIGERSYDVADVAA 304
+ I LAI I + + ++AA
Sbjct: 188 ERVGILLAITGAIRDEILPLEEIAA 212
>gi|188588618|ref|YP_001920596.1| ribosomal biogenesis GTPase [Clostridium botulinum E3 str. Alaska
E43]
gi|251780773|ref|ZP_04823693.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188498899|gb|ACD52035.1| GTP-binding protein [Clostridium botulinum E3 str. Alaska E43]
gi|243085088|gb|EES50978.1| GTP-binding protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 285
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 124/216 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +D L + RI++LN+ D+
Sbjct: 3 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIDSLLQGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + K +V+ N G G + + +L + + + R+KG++ R
Sbjct: 63 TEGKVTKDWIKHLTKDEVRVLEVNCLKGDGLKAIKPMLLSLLKEKHDRLRAKGMVNITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + RPGVT+ +W++ +E LD+PG++ R D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNSIAKTGDRPGVTKSKQWIKTSIGIELLDTPGVLWPRFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
+ A+ LA I + D+ +++ LV+ L T
Sbjct: 183 EETALNLAFTGAIKDEIMDIEELSYKLVERLQSFYT 218
>gi|322389595|ref|ZP_08063144.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis ATCC 903]
gi|321143721|gb|EFX39150.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis ATCC 903]
Length = 286
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 126/201 (62%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
+++ +QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++L
Sbjct: 2 ENMATIQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMIL 61
Query: 155 NREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
N+ D+ W YF QG K + N + K++ AK+L +D +++ +G+
Sbjct: 62 NKVDLADPVATKEWQDYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQ 121
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 122 IETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILW 181
Query: 275 MRISDQAAAIKLAICDDIGER 295
+ D+ A+KLA+ I ++
Sbjct: 182 PKFEDEEVALKLALTGAIKDQ 202
>gi|337282013|ref|YP_004621484.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis ATCC 15912]
gi|335369606|gb|AEH55556.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis ATCC 15912]
Length = 286
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 126/201 (62%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
+++ +QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++L
Sbjct: 2 ENMATIQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMIL 61
Query: 155 NREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
N+ D+ W YF QG K + N + K++ AK+L +D +++ +G+
Sbjct: 62 NKVDLADPVATKEWQDYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQ 121
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 122 IETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILW 181
Query: 275 MRISDQAAAIKLAICDDIGER 295
+ D+ A+KLA+ I ++
Sbjct: 182 PKFEDEEVALKLALTGAIKDQ 202
>gi|387879575|ref|YP_006309878.1| GTP-binding protein [Streptococcus parasanguinis FW213]
gi|386793028|gb|AFJ26063.1| GTP-binding protein [Streptococcus parasanguinis FW213]
Length = 291
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 12 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 71
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 72 ADPVATKEWQDYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 131
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 132 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 191
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 192 EEVALKLALTGAIKDQ 207
>gi|294793774|ref|ZP_06758911.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp.
3_1_44]
gi|294455344|gb|EFG23716.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp.
3_1_44]
Length = 301
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 125/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVILELVGQKPHIVLLNKIDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F KQG V+ + + G G KL + L+ + + +KG+ R+VR
Sbjct: 67 ADPKATKEWTEFFTKQGITVLAIDSKSGKGNKKLLSTVERLSKPIIDRWVAKGIRSRSVR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK+LE LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNLELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q AA +LA+ I + YD+ V L+ L
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNYL 217
>gi|160939136|ref|ZP_02086487.1| hypothetical protein CLOBOL_04030 [Clostridium bolteae ATCC
BAA-613]
gi|158438099|gb|EDP15859.1| hypothetical protein CLOBOL_04030 [Clostridium bolteae ATCC
BAA-613]
Length = 288
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 128/219 (58%), Gaps = 3/219 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PLS+ +P +D + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDMKLIDLVIELVDARVPLSSRNPDIDDLGAGKARMVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKR-RSKGLLPRAV 218
WA +F +G V+ + + GT+K + A ++R R +G+L R +
Sbjct: 63 ADERQNARWAAWFEDKGIHVVKVDAR-NKGTLKQVQSVIQEACKEKIERDRRRGILNRPI 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R +VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ R
Sbjct: 122 RTMVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGNQWIRLNKTLELLDTPGILWPRFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML-ARIPTV 316
DQ +KLA+ I ++ + ++A L++ L R P V
Sbjct: 182 DQQVGLKLALIGSINDQILNKDELACELIRFLKKRYPQV 220
>gi|419799417|ref|ZP_14324765.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis F0449]
gi|385698101|gb|EIG28487.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis F0449]
Length = 283
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 64 ADPVATKEWQDYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 EEVALKLALTGAIKDQ 199
>gi|167747196|ref|ZP_02419323.1| hypothetical protein ANACAC_01910 [Anaerostipes caccae DSM 14662]
gi|167654156|gb|EDR98285.1| ribosome biogenesis GTP-binding protein YlqF [Anaerostipes caccae
DSM 14662]
Length = 291
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 118/213 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP + +P +DQ N+ R+++LN+ D+
Sbjct: 10 FQWYPGHMTKAKRMMQENIKLIDIVIELVDARIPFGSRNPDIDQLAQNKSRLILLNKTDL 69
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G V N Q G G + + + + R +G+ R VR
Sbjct: 70 ADSRKTELWEQYFKDRGFFVGKVNSQKGTGVKAVQGIVMEACREKIERDRKRGIKNRPVR 129
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+ IN L + +PGVT+ +W++ K++E LD+PGI+ + D
Sbjct: 130 AMIAGIPNVGKSTFINSLAGKACTKTGNKPGVTKGKQWIKLNKNIELLDTPGILWPKFED 189
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q + LA+ I E + ++A L+ L +
Sbjct: 190 QTVGLHLALIGSIKEEILNQEEMAMELIPFLVK 222
>gi|326791385|ref|YP_004309206.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
lentocellum DSM 5427]
gi|326542149|gb|ADZ84008.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
lentocellum DSM 5427]
Length = 284
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 123/209 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ KT++ +++ +KL+D+VIE+ DAR P ST +P +D+ N+ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKTKRLIEENIKLVDIVIELLDARAPYSTKNPDIDKLAQNKMRIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +++ KV+ G G +++++A+ L + + R++G + R +R
Sbjct: 63 ADESITKEWIKWYSAHNVKVVPIIATTGKGIKEVTKIAEDLLKEKIERDRARGRIYRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN L+ + +PGVTR +WV+ K E LD PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTFINSLVGKGTAKTGDKPGVTRGKQWVKIKKGFELLDMPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
Q A LA I + D +A L++
Sbjct: 183 QMVARHLAYIGSINDNILDNRQLAIHLLE 211
>gi|317473603|ref|ZP_07932892.1| ribosome biogenesis GTP-binding protein YlqF [Anaerostipes sp.
3_2_56FAA]
gi|316898893|gb|EFV20918.1| ribosome biogenesis GTP-binding protein YlqF [Anaerostipes sp.
3_2_56FAA]
Length = 284
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 118/212 (55%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++ +++ +KL+D+VIE+ DARIP + +P +DQ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAKRMMQENIKLIDIVIELVDARIPFGSRNPDIDQLAQNKSRLILLNKTDLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W YF +G V N Q G G + + + + R +G+ R VRA
Sbjct: 64 DSRKTELWEQYFKDRGFFVGKVNSQKGTGVKAVQGIVMEACREKIERDRKRGIKNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
I G PNVGKS+ IN L + +PGVT+ +W++ K++E LD+PGI+ + DQ
Sbjct: 124 MIAGIPNVGKSTFINSLAGKACTKTGNKPGVTKGKQWIKLNKNIELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ LA+ I E + ++A L+ L +
Sbjct: 184 TVGLHLALIGSIKEEILNQEEMAMELIPFLVK 215
>gi|406577629|ref|ZP_11053229.1| GTPase YlqF [Streptococcus sp. GMD6S]
gi|406588490|ref|ZP_11063094.1| GTPase YlqF [Streptococcus sp. GMD1S]
gi|419815963|ref|ZP_14340365.1| GTPase YlqF [Streptococcus sp. GMD2S]
gi|404459694|gb|EKA06021.1| GTPase YlqF [Streptococcus sp. GMD6S]
gi|404464439|gb|EKA09979.1| GTPase YlqF [Streptococcus sp. GMD2S]
gi|404467876|gb|EKA12933.1| GTPase YlqF [Streptococcus sp. GMD1S]
Length = 283
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 124/196 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFIDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
A A+KLA+ I ++
Sbjct: 184 DAVALKLALTGAIKDQ 199
>gi|291563276|emb|CBL42092.1| ribosome biogenesis GTP-binding protein YlqF [butyrate-producing
bacterium SS3/4]
Length = 287
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 123/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR PL++ +P +D + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDVKLVDLVIELVDARAPLASRNPDIDSLAAGKGRVILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
S AW TYF QG +V+ + + +L+ L + + + R +G+L R VR
Sbjct: 63 ASEKANAAWITYFESQGFQVMKIDARAKATLKQLNALIQEACKEKIERDRRRGILNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN + +PGVT+ +W+R K +E LD+PGI+ + D
Sbjct: 123 AMVVGIPNVGKSTFINSFAGKAAAKTGNKPGVTKGNQWIRLNKQVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
Q + LA I + + ++A+ L L I
Sbjct: 183 QRVGLLLAFLGSINDEILEKDELASELADYLRNI 216
>gi|291524516|emb|CBK90103.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium rectale
DSM 17629]
Length = 281
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 125/210 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLSSRNPDIDELGKNKYRLILMNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W+ +F ++G V+ + + G ++ + + + R +G+ R VRA
Sbjct: 64 DKERTREWSAFFKEKGFFVVSLDARSKSGMKNITDIVMEACKEKIERDRKRGIKNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K +E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSYAGKACAKTGNKPGVTKGKQWIRLNKSVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA+ I + +V ++A LV+ L
Sbjct: 184 TVGLRLALIGSIKDEILNVDELAVELVKFL 213
>gi|300361595|ref|ZP_07057772.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
JV-V03]
gi|300354214|gb|EFJ70085.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
JV-V03]
Length = 279
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 116/213 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+DV+IEV DAR+P+S+ +P++ Q + I++LN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIILNKSDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G VI + Q L ++ K K +KG +R
Sbjct: 64 ADPIQTKKWTRYFQDEGNFVISMDAQHNTNMTSLFKIIKLAGKKKTEKLIAKGASNPMIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INR++ R +PGVTR W++ +++ LD+PGI+ + SD
Sbjct: 124 VAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA C I + DVA +++ L +
Sbjct: 184 QEVGYKLAACGAIKADVFHPDDVALFVIEFLKQ 216
>gi|417940352|ref|ZP_12583640.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK313]
gi|343389233|gb|EGV01818.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK313]
Length = 317
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 126/201 (62%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
K + +QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+L
Sbjct: 33 KFMATIQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLIL 92
Query: 155 NREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
N+ D+ A W YF QG + + N + + ++ AK L +D +++ +G+
Sbjct: 93 NKADLADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQ 152
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 153 IETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILW 212
Query: 275 MRISDQAAAIKLAICDDIGER 295
+ D+ A+KLA+ I ++
Sbjct: 213 PKFEDETVALKLALTGAIKDQ 233
>gi|160915180|ref|ZP_02077393.1| hypothetical protein EUBDOL_01188 [Eubacterium dolichum DSM 3991]
gi|158432979|gb|EDP11268.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium dolichum
DSM 3991]
Length = 292
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++++LK++D VIE+RDARIP ++ +P++D+ + R+++L++ D
Sbjct: 11 IQWFPGHMTKAKREMQEKLKMVDFVIELRDARIPNASRNPMLDELCKQKPRLIILSKRDK 70
Query: 160 ISMADRNAWATYFAKQGTKV----IFSNGQLGMGTMKLSRLAKALASDVNVKRR-SKGLL 214
+ W + + + TKV I + M +L KA ++R +G+
Sbjct: 71 AQASYTKQWIAHLSNETTKVLALDILKDSVTQMVVDASQQLMKA-----KIERMIRRGIR 125
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
PRA+RA +VG PNVGKS+ INR+ K+++ RPGVT+ L+W R KDLE LD+PG++
Sbjct: 126 PRAMRAMVVGVPNVGKSTFINRISKKKIATTGDRPGVTKALQWSRVNKDLELLDTPGVLW 185
Query: 275 MRISDQAAAIKLAICDDIGERSYDVADVA 303
+ D+ + LA+ I + + ++A
Sbjct: 186 PKFEDEQVGLLLAVTGAIRDEVLPIDEIA 214
>gi|408356881|ref|YP_006845412.1| GTP-binding protein [Amphibacillus xylanus NBRC 15112]
gi|407727652|dbj|BAM47650.1| putative GTP-binding protein [Amphibacillus xylanus NBRC 15112]
Length = 283
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 126/214 (58%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
++ +QW+PGH+AK +E++++LKL+D VIE+ DAR PL++ +P++ + L + ++ VL +
Sbjct: 1 MKTIQWFPGHMAKARREVQEKLKLVDFVIELVDARAPLASQNPMLQEILQQKPKMQVLMK 60
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+D+ N W + + + + Q K+ AK + ++ + + KG+ PR
Sbjct: 61 KDLADPELTNIWLEKLREDEIEAVAVDVQNRQDIQKVIETAKKMTAEKMERLKKKGVRPR 120
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
A RA I+G PNVGKS+LINRL +++ RPG+T +W++ KD E LD+PGI+ +
Sbjct: 121 AGRAMIIGIPNVGKSTLINRLANKKIAKTGDRPGITTAQQWIKVKKDFELLDTPGILWPK 180
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ +LA I ++ + D+A ++ +
Sbjct: 181 FEDQNVGYQLAAIGTIKDQILSIEDIARFTLKFI 214
>gi|295696076|ref|YP_003589314.1| ribosome biogenesis GTP-binding protein YlqF [Kyrpidia tusciae DSM
2912]
gi|295411678|gb|ADG06170.1| ribosome biogenesis GTP-binding protein YlqF [Kyrpidia tusciae DSM
2912]
Length = 290
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +E+ ++ +DVV+E+ DARIP ++ +P++ + +G++ R++V+ R+D+
Sbjct: 3 IQWYPGHMAKARREVATAIRWVDVVLELVDARIPSASRNPVLGELIGDKPRLIVMTRDDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +FA+QG + + + + G G + + LA+ + + +G+ R VR
Sbjct: 63 ADPDVSRRWIGFFARQGGRAVAVDARSGRGLRGIGGAVRELAAPSVERWKKRGVRNRGVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLINRL R PGVTR +W+R + E LD+PGI+ + D
Sbjct: 123 VLILGIPNVGKSSLINRLAGRSAAKTGDLPGVTRAQQWIRTSEGFELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA I E + DVA L + L
Sbjct: 183 PETGLLLAATGAIKEEILPLEDVAVFLFKRL 213
>gi|350270322|ref|YP_004881630.1| putative GTP-binding protein [Oscillibacter valericigenes Sjm18-20]
gi|348595164|dbj|BAK99124.1| putative GTP-binding protein [Oscillibacter valericigenes Sjm18-20]
Length = 293
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 120/213 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ KT + + DQLK +D V E+ DARIP+S+ +P +D+ + R++VLNR D
Sbjct: 9 IQWYPGHMTKTRRMITDQLKNVDAVCELLDARIPVSSRNPDVDELTAGKPRLVVLNRADQ 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
WA +F ++G V+ + + G G + + L +D KG R +R
Sbjct: 69 ADPNLTKRWAAFFREKGYAVLECSAKDGSGVDRFPAAVRTLLADKLRAFAEKGQGGRTMR 128
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+ INR+ KR+ RPGVTR +WV + L+ LD+PGI+ + D
Sbjct: 129 VMILGIPNVGKSTFINRVAKRKTARTEDRPGVTRAKQWVPVDQGLDLLDTPGILWPKFED 188
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q+ + LA + + D+ +A L+ LAR
Sbjct: 189 QSVGLNLAFTGAVRDEVIDLEGLACNLMVYLAR 221
>gi|302670912|ref|YP_003830872.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
gi|302395385|gb|ADL34290.1| GTP-binding protein [Butyrivibrio proteoclasticus B316]
Length = 293
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 123/210 (58%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K + +++ +KL+D++IE+ DARIP S +P +D+ N+ R+++LN+ D+
Sbjct: 4 QWYPGHMTKAVRMMQENIKLIDIIIELTDARIPASGRNPDIDELGKNKFRLIILNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W Y+ K G V+ N + G K+ L ++ + + +G++ R +RA
Sbjct: 64 DPQVTREWKEYYQKTGAFVMEMNSKTGNEAAKVKDLVTKACAEKIERDKKRGIVGRPIRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+ G PNVGKS+ IN+L + +PGVT+ +W+ GK+++ LD+PGI+ + D+
Sbjct: 124 MVAGIPNVGKSTFINKLAGKASAKTGNKPGVTKGKQWIALGKNMQLLDTPGILWPKFEDE 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA+ + + + D ++A L+++L
Sbjct: 184 TVGLHLALIGSMNDENLDTTELACELIKIL 213
>gi|373121387|ref|ZP_09535255.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 21_3]
gi|371665405|gb|EHO30570.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 21_3]
Length = 288
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 132/211 (62%), Gaps = 12/211 (5%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++++L ++D+VIE+RDARIP ++ +P++++ N+ R++VL+++D
Sbjct: 8 IQWFPGHMTKAKREMQEKLNMVDMVIELRDARIPSASKNPMIEELCQNKPRLIVLSKKDK 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKA-----LASDVNVKR-RSKGL 213
A W + + T+V+ + +K + +A+ L ++R + +G+
Sbjct: 68 ADAAATKLWCSALQNETTRVV------ALDILKENIIARIVEESRLLMQAKIERMKRRGI 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
PRA+RA +VG PNVGKS+ INR+ K+++ RPGVTR L+W + ++LE LD+PG++
Sbjct: 122 RPRAIRAMVVGVPNVGKSTFINRISKKKVAVTGDRPGVTRALQWSKVNQNLELLDTPGVL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAA 304
+ D+ + LAI I + + ++AA
Sbjct: 182 WSKFEDETVGVLLAITGAIRDEILPLEEIAA 212
>gi|319947077|ref|ZP_08021311.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
australis ATCC 700641]
gi|319747125|gb|EFV99384.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
australis ATCC 700641]
Length = 290
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 11 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 70
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 71 ADPVATKEWQEYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 130
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 131 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 190
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 191 EDVALKLALTGAIKDQ 206
>gi|291527942|emb|CBK93528.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium rectale
M104/1]
Length = 281
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 125/210 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLSSRNPDIDELGKNKYRLILMNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W+ +F ++G V+ + + G ++ + + + R +G+ R VRA
Sbjct: 64 DKERTREWSAFFKEKGFFVVSLDARSKSGMKSITDIVMEACKEKIERDRKRGIKNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K +E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSYAGKACAKTGNKPGVTKGKQWIRLNKSVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA+ I + +V ++A LV+ L
Sbjct: 184 TVGLRLALIGSIKDEILNVDELAVELVKFL 213
>gi|116629568|ref|YP_814740.1| GTPase [Lactobacillus gasseri ATCC 33323]
gi|238853073|ref|ZP_04643465.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
202-4]
gi|282852053|ref|ZP_06261411.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
224-1]
gi|311110788|ref|ZP_07712185.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
MV-22]
gi|420147282|ref|ZP_14654558.1| Ribosome biogenesis GTPase A [Lactobacillus gasseri CECT 5714]
gi|116095150|gb|ABJ60302.1| Ras superfamily GTP-binding protein YlqF [Lactobacillus gasseri
ATCC 33323]
gi|238834321|gb|EEQ26566.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
202-4]
gi|282556813|gb|EFB62417.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
224-1]
gi|311065942|gb|EFQ46282.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus gasseri
MV-22]
gi|398401283|gb|EJN54785.1| Ribosome biogenesis GTPase A [Lactobacillus gasseri CECT 5714]
Length = 279
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 116/213 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+DV+IEV DAR+P+S+ +P++ Q + I++LN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIILNKSDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G VI + Q L ++ K K +KG +R
Sbjct: 64 ADPIQTKKWTRYFQDEGNFVISMDAQHNTNMTSLFKIIKLAGKKKTEKLIAKGASNPMIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INR++ R +PGVTR W++ +++ LD+PGI+ + SD
Sbjct: 124 VAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA C I + DVA +++ L +
Sbjct: 184 QEVGYKLAACGAIKADVFHPDDVALFVIEFLKQ 216
>gi|444383788|ref|ZP_21181969.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS8106]
gi|444386338|ref|ZP_21184398.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS8203]
gi|444247922|gb|ELU54447.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS8203]
gi|444248349|gb|ELU54859.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS8106]
Length = 289
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 125/200 (62%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ +QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN
Sbjct: 6 SMATIQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILN 65
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ D+ A W YF QG + + N + + ++ AK L +D +++ +G+
Sbjct: 66 KADLADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQI 125
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 126 ETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWP 185
Query: 276 RISDQAAAIKLAICDDIGER 295
+ D+ A+KLA+ I ++
Sbjct: 186 KFEDETVALKLALTGAIKDQ 205
>gi|417920255|ref|ZP_12563767.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
australis ATCC 700641]
gi|342829906|gb|EGU64247.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
australis ATCC 700641]
Length = 283
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 64 ADPVATKEWQEYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 EDVALKLALTGAIKDQ 199
>gi|451818144|ref|YP_007454345.1| ribosome biogenesis GTPase A [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451784123|gb|AGF55091.1| ribosome biogenesis GTPase A [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 288
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +++ L + RI++LN+ D+
Sbjct: 3 INWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIEKLLEGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y +V+ N G G + + L + + + R+KG++ +R
Sbjct: 63 TDSNVTKEWIDYLTNDIVRVLEVNCLKGDGLKNIKPMLLNLLKEKHDRLRAKGMVNIMMR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + RPGVT+ +W++ G +E LD+PG++ + D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNNIAKTGDRPGVTKSKQWIKTGAGIELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
A+ LA I + D+ ++A LV L
Sbjct: 183 DETALNLAFTGAIKDEIMDIEELALKLVDRL 213
>gi|419766049|ref|ZP_14292267.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK579]
gi|383354502|gb|EID32064.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK579]
Length = 283
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D ++R +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQRERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|270292736|ref|ZP_06198947.1| GTP-binding protein [Streptococcus sp. M143]
gi|270278715|gb|EFA24561.1| GTP-binding protein [Streptococcus sp. M143]
Length = 283
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 124/196 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVIGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
A A+KLA+ I ++
Sbjct: 184 DAVALKLALTGAIKDQ 199
>gi|414155585|ref|ZP_11411896.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
F0442]
gi|410872810|gb|EKS20749.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
F0442]
Length = 283
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G + ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGEKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 64 ADPVATKEWQDYFESQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 EEVALKLALTGAIKDQ 199
>gi|418975316|ref|ZP_13523225.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK1074]
gi|383348687|gb|EID26646.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK1074]
Length = 330
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 126/201 (62%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
K + +QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+L
Sbjct: 46 KFMATIQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLIL 105
Query: 155 NREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
N+ D+ A W YF QG + + N + + ++ AK L +D +++ +G+
Sbjct: 106 NKADLADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIK 165
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 166 IETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILW 225
Query: 275 MRISDQAAAIKLAICDDIGER 295
+ D+ A+KLA+ I ++
Sbjct: 226 PKFEDETVALKLALTGAIKDQ 246
>gi|291522200|emb|CBK80493.1| ribosome biogenesis GTP-binding protein YlqF [Coprococcus catus
GD/7]
Length = 285
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 123/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +++ +KL+D+VIE+ DAR+PL++ +P +D + R+++LN+ DM
Sbjct: 3 IQWYPGHMTKARRMMQEDIKLIDIVIELVDARLPLASKNPDIDDLAKGKARLILLNKSDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF +G V+ N + G G ++ + + + R +G+ R +R
Sbjct: 63 ADPKYTKLWESYFKAKGFFVLQINARTGAGMKAVTGVVNEACKEKIERDRRRGIKNRPIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKS+ IN + +PGVT+ +W++ K++E LD+PGI+ + D
Sbjct: 123 AMIVGIPNVGKSTFINSYAGKACTKTGNKPGVTKGKQWIKLNKNVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
QA KLAI I + ++ ++A L +++
Sbjct: 183 QAVGQKLAISGSIKDDILNITELAMKLADYMSK 215
>gi|256851136|ref|ZP_05556525.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 27-2-CHN]
gi|260660560|ref|ZP_05861475.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 115-3-CHN]
gi|256616198|gb|EEU21386.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 27-2-CHN]
gi|260548282|gb|EEX24257.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 115-3-CHN]
Length = 280
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +PL+ +G++ I++LN+ D+
Sbjct: 3 IQWYPGHMNKARVQLEDKLSLLDVIVEVVDARIPASSRNPLISDIVGDKPHIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N W G V+ + Q L +L K A D K +KG +R
Sbjct: 63 ADPNEINKWEAKLKSDGKFVLKLDAQHNTNMAPLFKLIKLAAKDRIDKLEAKGASNPTIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++INRL+ R + RPGVT+ W++ + ++ LD+PGI+ + D
Sbjct: 123 ICLVGIPNCGKSTIINRLVGRNVAIVGDRPGVTKGQSWLKTSESVQILDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +LA I E + DVA +++ L
Sbjct: 183 QAVGFRLAALGSIKESVFHADDVALFVMEYL 213
>gi|238923884|ref|YP_002937400.1| ribosomal biogenesis GTPase [Eubacterium rectale ATCC 33656]
gi|238875559|gb|ACR75266.1| ribosomal biogenesis GTPase [Eubacterium rectale ATCC 33656]
Length = 281
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 125/210 (59%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPLS+ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLSSRNPDIDELGKNKYRLILMNKADLA 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W+ +F ++G V+ + + G ++ + + + R +G+ R VRA
Sbjct: 64 DKERTREWSAFFKEKGFFVVSLDARSKSGMKSITDIVMEACKEKIERDRKRGIKNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K +E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSYAGKACAKTGNKPGVTKGKQWIRLNKSVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
++LA+ I + +V ++A LV+ L
Sbjct: 184 TVGLRLALIGSIKDEILNVDELAVELVKFL 213
>gi|297206002|ref|ZP_06923397.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii JV-V16]
gi|297149128|gb|EFH29426.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii JV-V16]
Length = 280
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +PL+ +G++ I++LN+ D+
Sbjct: 3 IQWYPGHMNKARVQLEDKLSLLDVIVEVVDARIPASSRNPLISDIVGDKPHIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N W G V+ + Q L +L K A D K +KG +R
Sbjct: 63 ADPNEINKWEAKLKSDGKFVLKLDAQHNTNMAPLFKLIKLAAKDRIDKLEAKGASNPTIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++INRL+ R + RPGVT+ W++ + ++ LD+PGI+ + D
Sbjct: 123 ICLVGIPNCGKSTIINRLVGRNVAIVGDRPGVTKRQSWLKTSESVQILDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +LA I E + DVA +++ L
Sbjct: 183 QAVGFRLAALGSIKESVFHADDVALFVMEYL 213
>gi|417676893|ref|ZP_12326303.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17545]
gi|418155144|ref|ZP_12791875.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16242]
gi|418225544|ref|ZP_12852173.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP112]
gi|332075089|gb|EGI85560.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17545]
gi|353823436|gb|EHE03611.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16242]
gi|353882852|gb|EHE62663.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP112]
Length = 283
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 124/196 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V+ + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVMILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|306825208|ref|ZP_07458550.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
oral taxon 071 str. 73H25AP]
gi|304432644|gb|EFM35618.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
oral taxon 071 str. 73H25AP]
Length = 301
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 126/201 (62%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
K + +QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+L
Sbjct: 17 KFMATIQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLIL 76
Query: 155 NREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
N+ D+ A W YF QG + + N + + ++ AK L +D +++ +G+
Sbjct: 77 NKADLADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIK 136
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 137 IETLRTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILW 196
Query: 275 MRISDQAAAIKLAICDDIGER 295
+ D+ A+KLA+ I ++
Sbjct: 197 PKFEDETVALKLALTGAIKDQ 217
>gi|116494883|ref|YP_806617.1| GTPase [Lactobacillus casei ATCC 334]
gi|116105033|gb|ABJ70175.1| Ras superfamily GTP-binding protein YlqF [Lactobacillus casei ATCC
334]
Length = 286
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 126/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
QA ++LA I + +
Sbjct: 184 QAIGMRLAFTGAIADAVF 201
>gi|28210940|ref|NP_781884.1| ribosomal biogenesis GTPase [Clostridium tetani E88]
gi|28203379|gb|AAO35821.1| GTP-binding protein [Clostridium tetani E88]
Length = 298
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 120/212 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +ELK+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN+ D+
Sbjct: 20 INWFPGHMAKTRRELKENLKMVDAIIEIRDARIVKSSANPEIENICGNKPRIILLNKSDL 79
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W + + TKVI N G K+ L + K ++KGL R
Sbjct: 80 GEEKVTNEWIKALSGENTKVIAINSLKDSGMKKIKNAIDDLLKEKTEKLKAKGLKNIVNR 139
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ INR+ K + RPGVT+ +W++ +E +D+PGI+ + D
Sbjct: 140 VMVVGIPNVGKSTFINRMAKSSIAKTGDRPGVTKSRQWIKTKIGVELMDTPGILWPKFED 199
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ + LA I + D+ +A L++ L+
Sbjct: 200 EKVGLNLAFTGAIKDEIMDIETLALNLIERLS 231
>gi|414158502|ref|ZP_11414796.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
F0441]
gi|410871047|gb|EKS19004.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
F0441]
Length = 283
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 124/196 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIALVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|81428605|ref|YP_395605.1| GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
gi|78610247|emb|CAI55296.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
Length = 282
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 124/203 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +K++K++LK +D+++E+ DAR+P S+ +P++ + N+ +L++N+ DM
Sbjct: 3 IQWYPGHMAKAQKQIKERLKAVDLILEIVDARVPESSINPMIQELGQNKPILLIMNKADM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F K+G I + Q + ++A+ + ++ K+R+KG+ +R
Sbjct: 63 ADPRRTQQWIETFKKRGITAIALDAQHKAKLPMIEKVAQEILAEKLAKKRAKGIRNPVIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+++NRL+++ + RPGVT+ +W++ G+ LE LD+PG++ + D
Sbjct: 123 AMCVGVPNVGKSTILNRLVQKNIAVTGNRPGVTKNQQWLKAGQTLELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADV 302
KLA+ I + Y DV
Sbjct: 183 PTIGSKLALTGAISDAIYHPDDV 205
>gi|433462620|ref|ZP_20420197.1| ribosomal biogenesis GTPase [Halobacillus sp. BAB-2008]
gi|432188568|gb|ELK45749.1| ribosomal biogenesis GTPase [Halobacillus sp. BAB-2008]
Length = 280
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E ++LKL+D VIE+ DAR P S+ +P++ + L + +++VL ++D+
Sbjct: 3 IQWYPGHMAKAKREAAEKLKLVDFVIELVDARAPFSSQNPMLHEILQEKPKMIVLMKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + ++ + AK L + K ++KG+ PRA R
Sbjct: 63 ADPQKTAEWIEYFEASSIPAVAIEANKKQDVQRVVQKAKELGREKLEKLKAKGVRPRASR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL ++M +PGVT +W++ K+ E LD+PGI+ + +
Sbjct: 123 AMILGIPNVGKSTLINRLANKKMAKTGDKPGVTTKQQWIKVKKEFELLDTPGILWPKFEE 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +LA I ++ DVAA ++ +
Sbjct: 183 EEVGYRLAAIGTIKDQILPKEDVAAYVLDYM 213
>gi|329768913|ref|ZP_08260340.1| ribosome biogenesis GTP-binding protein YlqF [Gemella sanguinis
M325]
gi|328836630|gb|EGF86288.1| ribosome biogenesis GTP-binding protein YlqF [Gemella sanguinis
M325]
Length = 292
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 136/211 (64%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +E+K++LKL+D+V E+ DAR PLS+ + +D+ + ++K+I++ N+ D+
Sbjct: 3 IQWFPGHMAKATREVKEKLKLVDIVFELVDARCPLSSHNMYLDEVVKDKKKIIIFNKIDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF +G V++++ + K+ AK ++ ++ +KG+ PRA+R
Sbjct: 63 CDRKETVKWKNYFENKGYVVVYTDAKNSNNLNKVIDKAKEELAEKIARQVAKGIKPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ ++G PNVGKS+ IN+L+K+ + A +PGVT+ +W++ KD+E LD+PGI+ + +
Sbjct: 123 SMVIGVPNVGKSTFINKLIKKNVANTANKPGVTKKQQWLKLNKDIELLDTPGILMPKFDN 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KL++ I + + DV+ L+++L
Sbjct: 183 QEIGKKLSLIGSIKDDITPLDDVSLYLIELL 213
>gi|401680005|ref|ZP_10811929.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp. ACP1]
gi|400219132|gb|EJO50003.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella sp. ACP1]
Length = 301
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVILELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +QG V+ + + G G KL + L+ + + +KG+ R++R
Sbjct: 67 ADPKATKEWTEFFTQQGITVLAIDSKSGKGNKKLVSTVERLSKPIIDRWVAKGIRSRSIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK++E LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNMELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADV-AAILVQMLARIPTV 316
Q AA +LA+ I + YD+ V +L +L P +
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNHLLTNTPNI 224
>gi|303228991|ref|ZP_07315801.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella atypica
ACS-134-V-Col7a]
gi|302516405|gb|EFL58337.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella atypica
ACS-134-V-Col7a]
Length = 301
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVILELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +QG V+ + + G G KL + L+ + + +KG+ R++R
Sbjct: 67 ADPKATKEWTEFFTQQGITVLAIDSKSGKGNKKLVSTVERLSKPIIDRWVAKGIRSRSIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK++E LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNMELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADV-AAILVQMLARIPTV 316
Q AA +LA+ I + YD+ V +L +L P +
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNHLLTNTPNI 224
>gi|429759493|ref|ZP_19291991.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella atypica
KON]
gi|429179454|gb|EKY20701.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella atypica
KON]
Length = 301
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVILELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +QG V+ + + G G KL + L+ + + +KG+ R++R
Sbjct: 67 ADPKATKEWTEFFTQQGITVLAIDSKSGKGNKKLVSTVERLSKPIIDRWVAKGIRSRSIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK++E LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNMELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADV-AAILVQMLARIPTV 316
Q AA +LA+ I + YD+ V +L +L P +
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNHLLTNTPNI 224
>gi|303231444|ref|ZP_07318175.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella atypica
ACS-049-V-Sch6]
gi|302513881|gb|EFL55892.1| ribosome biogenesis GTP-binding protein YlqF [Veillonella atypica
ACS-049-V-Sch6]
Length = 301
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 128/218 (58%), Gaps = 1/218 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V W+PGH+AK + + + +K +DVVIE+ DARIP S+ +P++ + +G + I++LN+ D+
Sbjct: 7 VHWFPGHMAKATRMITEYIKKVDVVIELLDARIPRSSANPVILELVGQKPHIVLLNKVDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +QG V+ + + G G KL + L+ + + +KG+ R++R
Sbjct: 67 ADPKATKEWTEFFTQQGITVLAIDSKSGKGNKKLVSTVERLSKPIIDRWVAKGIRSRSIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+LIN L A + G TR +WV+ GK++E LD+PG++ ++ D
Sbjct: 127 TIILGIPNVGKSTLINSLAGSAATRTANKAGHTRGQQWVKIGKNMELLDTPGVLWPKLED 186
Query: 280 QAAAIKLAICDDIGERSYDVADV-AAILVQMLARIPTV 316
Q AA +LA+ I + YD+ V +L +L P +
Sbjct: 187 QRAAARLAMTGAISDDVYDLEHVIKQLLNHLLTNTPNI 224
>gi|333979537|ref|YP_004517482.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333823018|gb|AEG15681.1| ribosome biogenesis GTP-binding protein YlqF [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 282
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+A+ + +++ LKL+DVVIE+ DARIP S+ +PL+ + +G + ++VLN+ED+
Sbjct: 3 IQWYPGHMARARRLVQENLKLVDVVIELLDARIPASSRNPLIGKIVGGKPHLVVLNKEDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F +G + + G ++ L + L D ++G P R
Sbjct: 63 ADPHLTRLWLDWFRGRGLPALAVDSTRRKGVAEVPMLVRRLVEDKMASLAARGRRPPNPR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS IN L R+ RPGVTR +WVR +++E LD+PG++ + D
Sbjct: 123 CMVVGIPNVGKSFFINALAGSRVTRTGNRPGVTRGQQWVRLAREVELLDTPGVLWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+KLA I E +DV +VAA L + L
Sbjct: 183 PRVGLKLAATGAIKEEVFDVEEVAAWLAEWL 213
>gi|322376563|ref|ZP_08051056.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
M334]
gi|321282370|gb|EFX59377.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
M334]
Length = 283
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKITRQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|168577175|ref|ZP_02722990.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|419471085|ref|ZP_14010944.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA07914]
gi|419503941|ref|ZP_14043610.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47760]
gi|183577218|gb|EDT97746.1| GTP-binding protein [Streptococcus pneumoniae MLV-016]
gi|379545801|gb|EHZ10940.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA07914]
gi|379606618|gb|EHZ71365.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47760]
Length = 283
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|374337964|ref|YP_005094673.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
macedonicus ACA-DC 198]
gi|372284073|emb|CCF02315.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
macedonicus ACA-DC 198]
Length = 284
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 126/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG K + N + ++ AK+L +D K R +G+ +R
Sbjct: 64 ADSNRTKEWRNYFEKQGIKTLAVNSKEQATVKLVTDAAKSLMADKIAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ +KLA+ I ++ + +V + +
Sbjct: 184 EVVGLKLALTGAIKDQLLPMDEVTIFGINFFKK 216
>gi|300854481|ref|YP_003779465.1| GTP-binding protein [Clostridium ljungdahlii DSM 13528]
gi|300434596|gb|ADK14363.1| predicted GTP-binding protein [Clostridium ljungdahlii DSM 13528]
Length = 284
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 1/216 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT++E+K LKL+D VIE+RDARI S+ +P +D G++ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTKREMKQNLKLVDAVIEIRDARIIRSSKNPEVDDICGSKPRIILLNKNDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y + + K + N G G + L L + + + +KG+L R
Sbjct: 63 SEDSVTKKWIKYLSNKNIKALAVNSNTGQGIKSIKPLLDELLKEKHDRMNNKGILGITDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + +PGVTR +W++ +E +D+PGI+ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKTGDKPGVTRSKQWIKTKLGIELMDTPGILWPKLES 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA-AILVQMLARIP 314
Q + LA I + D+ ++A ++L + R P
Sbjct: 183 QETQLHLAFTGAIKDEIMDIEELALSLLKDLCERYP 218
>gi|255524251|ref|ZP_05391210.1| GTP1/OBG protein [Clostridium carboxidivorans P7]
gi|296185373|ref|ZP_06853783.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
carboxidivorans P7]
gi|255512076|gb|EET88357.1| GTP1/OBG protein [Clostridium carboxidivorans P7]
gi|296050207|gb|EFG89631.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
carboxidivorans P7]
Length = 280
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LKL+D +IE+RDARI S+ +P +D GN+ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTRREIKENLKLVDAIIEIRDARIVRSSKNPDIDDLCGNKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +K +V+ N G G + + L + + ++++KG++ R
Sbjct: 63 SEDKVTKEWIKTLSKDNIRVLTVNCITGEGLKSIKAVVNELLQEKHERKKAKGIVNITDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVTR +W++ +E +D+PGI+ ++
Sbjct: 123 VMVVGIPNVGKSSFINKVAKSSIAKTGDRPGVTRSRQWIKTKIGIELMDTPGILWPKLES 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ ++A LV+ L
Sbjct: 183 EETQLNLAFTGAIKDEVMDIEELALKLVERL 213
>gi|149006185|ref|ZP_01829897.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|194398607|ref|YP_002037767.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae G54]
gi|307127248|ref|YP_003879279.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|417686456|ref|ZP_12335734.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41301]
gi|417698436|ref|ZP_12347608.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41317]
gi|418096244|ref|ZP_12733358.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16531]
gi|418121196|ref|ZP_12758142.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44194]
gi|418131970|ref|ZP_12768845.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11304]
gi|418148561|ref|ZP_12785326.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13856]
gi|418159876|ref|ZP_12796575.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17227]
gi|419442580|ref|ZP_13982609.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13224]
gi|419453088|ref|ZP_13993061.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP03]
gi|419466560|ref|ZP_14006443.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA05248]
gi|419491047|ref|ZP_14030787.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47179]
gi|419506076|ref|ZP_14045737.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA49194]
gi|419512513|ref|ZP_14052147.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA05578]
gi|419516781|ref|ZP_14056399.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02506]
gi|419521124|ref|ZP_14060719.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA05245]
gi|419532246|ref|ZP_14071762.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47794]
gi|421211230|ref|ZP_15668213.1| hypothetical protein AMCSP03_001248 [Streptococcus pneumoniae
2070035]
gi|421227359|ref|ZP_15684064.1| hypothetical protein AMCSP08_001176 [Streptococcus pneumoniae
2072047]
gi|421238652|ref|ZP_15695219.1| hypothetical protein AMCSP15_001218 [Streptococcus pneumoniae
2071247]
gi|421245048|ref|ZP_15701548.1| hypothetical protein AMCSP10_001018 [Streptococcus pneumoniae
2081685]
gi|421283311|ref|ZP_15734098.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA04216]
gi|147761962|gb|EDK68924.1| GTP-binding protein [Streptococcus pneumoniae SP18-BS74]
gi|194358274|gb|ACF56722.1| GTP-binding protein [Streptococcus pneumoniae G54]
gi|306484310|gb|ADM91179.1| GTP-binding protein [Streptococcus pneumoniae 670-6B]
gi|332076293|gb|EGI86759.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41301]
gi|332200481|gb|EGJ14553.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41317]
gi|353770156|gb|EHD50671.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16531]
gi|353794023|gb|EHD74382.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44194]
gi|353807636|gb|EHD87905.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11304]
gi|353813236|gb|EHD93469.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13856]
gi|353821609|gb|EHE01785.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17227]
gi|379538424|gb|EHZ03604.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA05245]
gi|379544683|gb|EHZ09827.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA05248]
gi|379552928|gb|EHZ18016.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13224]
gi|379594626|gb|EHZ59436.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47179]
gi|379606030|gb|EHZ70779.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47794]
gi|379607990|gb|EHZ72736.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA49194]
gi|379626797|gb|EHZ91413.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP03]
gi|379636983|gb|EIA01541.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA05578]
gi|379640784|gb|EIA05323.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02506]
gi|395573188|gb|EJG33779.1| hypothetical protein AMCSP03_001248 [Streptococcus pneumoniae
2070035]
gi|395595527|gb|EJG55758.1| hypothetical protein AMCSP08_001176 [Streptococcus pneumoniae
2072047]
gi|395601915|gb|EJG62060.1| hypothetical protein AMCSP15_001218 [Streptococcus pneumoniae
2071247]
gi|395608890|gb|EJG68981.1| hypothetical protein AMCSP10_001018 [Streptococcus pneumoniae
2081685]
gi|395881274|gb|EJG92323.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA04216]
Length = 283
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|15903087|ref|NP_358637.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae R6]
gi|116515446|ref|YP_816493.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae D39]
gi|421266169|ref|ZP_15717051.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR27]
gi|15458663|gb|AAK99847.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
gi|116076022|gb|ABJ53742.1| GTP-binding protein [Streptococcus pneumoniae D39]
gi|183217365|gb|ACC59284.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae]
gi|395867731|gb|EJG78852.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR27]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|307708681|ref|ZP_07645144.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
gi|307615255|gb|EFN94465.1| GTP-binding protein [Streptococcus mitis NCTC 12261]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|386714315|ref|YP_006180638.1| ribosomal biogenesis GTPase [Halobacillus halophilus DSM 2266]
gi|384073871|emb|CCG45364.1| ribosomal biogenesis GTPase [Halobacillus halophilus DSM 2266]
Length = 280
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E + LKL+D VIE+ DAR PLS+ +P++ LG++ +++VL ++D+
Sbjct: 3 IQWYPGHMAKAKREASENLKLVDFVIELVDARAPLSSQNPMLQGILGDKPKMMVLMKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F + G I + L K++ ++ K ++KG+ PRA R
Sbjct: 63 ADPKVTKEWLEHFKENGFPSIAIEANNKQDIQAVINLGKSIGNEKIEKLKAKGVRPRASR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL + + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 123 AMILGIPNVGKSTLINRLANKSIAKTGDKPGVTKKQQWIKVKNEFDLLDTPGILWPKFEE 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +LA I ++ DVAA ++ L
Sbjct: 183 EEVGYRLASIGTIKDQILPTEDVAAYVLDYL 213
>gi|15901020|ref|NP_345624.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae TIGR4]
gi|111658305|ref|ZP_01408995.1| hypothetical protein SpneT_02000534 [Streptococcus pneumoniae
TIGR4]
gi|148994504|ref|ZP_01823684.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP9-BS68]
gi|168483217|ref|ZP_02708169.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|168488984|ref|ZP_02713183.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|168492509|ref|ZP_02716652.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|168493081|ref|ZP_02717224.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|221231869|ref|YP_002511021.1| GTPase protein [Streptococcus pneumoniae ATCC 700669]
gi|225854631|ref|YP_002736143.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae JJA]
gi|225856833|ref|YP_002738344.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae P1031]
gi|225858943|ref|YP_002740453.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae 70585]
gi|383938074|ref|ZP_09991298.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudopneumoniae SK674]
gi|387626472|ref|YP_006062647.1| putative GTPase protein [Streptococcus pneumoniae INV104]
gi|415698636|ref|ZP_11457250.1| hypothetical protein CGSSp4595_1051 [Streptococcus pneumoniae
459-5]
gi|415749531|ref|ZP_11477475.1| hypothetical protein CGSSpSV35_1221 [Streptococcus pneumoniae SV35]
gi|415752216|ref|ZP_11479327.1| hypothetical protein CGSSpSV36_0939 [Streptococcus pneumoniae SV36]
gi|417679121|ref|ZP_12328518.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17570]
gi|417694074|ref|ZP_12343262.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47901]
gi|417696351|ref|ZP_12345530.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47368]
gi|418073927|ref|ZP_12711184.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11184]
gi|418078628|ref|ZP_12715851.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 4027-06]
gi|418080600|ref|ZP_12717812.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 6735-05]
gi|418089532|ref|ZP_12726689.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA43265]
gi|418091790|ref|ZP_12728932.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44452]
gi|418098507|ref|ZP_12735606.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 6901-05]
gi|418105220|ref|ZP_12742278.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44500]
gi|418107579|ref|ZP_12744617.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41410]
gi|418110134|ref|ZP_12747157.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA49447]
gi|418112490|ref|ZP_12749492.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41538]
gi|418114707|ref|ZP_12751695.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 5787-06]
gi|418116873|ref|ZP_12753844.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 6963-05]
gi|418123415|ref|ZP_12760348.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44378]
gi|418125795|ref|ZP_12762703.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44511]
gi|418128000|ref|ZP_12764896.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP170]
gi|418130321|ref|ZP_12767205.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA07643]
gi|418135202|ref|ZP_12772059.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11426]
gi|418137177|ref|ZP_12774019.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11663]
gi|418162208|ref|ZP_12798894.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17328]
gi|418169180|ref|ZP_12805823.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA19077]
gi|418173517|ref|ZP_12810130.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41277]
gi|418175969|ref|ZP_12812564.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41437]
gi|418178176|ref|ZP_12814760.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41565]
gi|418182650|ref|ZP_12819211.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA43380]
gi|418187165|ref|ZP_12823693.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47360]
gi|418191711|ref|ZP_12828215.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47388]
gi|418193770|ref|ZP_12830262.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47439]
gi|418214344|ref|ZP_12841079.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA54644]
gi|418216589|ref|ZP_12843312.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae
Netherlands15B-37]
gi|418218899|ref|ZP_12845566.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP127]
gi|418221214|ref|ZP_12847868.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47751]
gi|418229903|ref|ZP_12856507.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae EU-NP01]
gi|418234359|ref|ZP_12860938.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA08780]
gi|418238721|ref|ZP_12865276.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|418972904|ref|ZP_13520955.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|419422948|ref|ZP_13963163.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA43264]
gi|419431512|ref|ZP_13971653.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP05]
gi|419434262|ref|ZP_13974379.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40183]
gi|419440240|ref|ZP_13980292.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40410]
gi|419459991|ref|ZP_13999922.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02270]
gi|419462316|ref|ZP_14002223.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02714]
gi|419464642|ref|ZP_14004534.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA04175]
gi|419469002|ref|ZP_14008873.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA06083]
gi|419473203|ref|ZP_14013054.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13430]
gi|419477817|ref|ZP_14017642.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA18068]
gi|419483974|ref|ZP_14023750.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA43257]
gi|419488131|ref|ZP_14027884.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA44386]
gi|419493154|ref|ZP_14032881.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47210]
gi|419497324|ref|ZP_14037033.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47522]
gi|419508232|ref|ZP_14047885.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA49542]
gi|419525897|ref|ZP_14065459.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA14373]
gi|421220306|ref|ZP_15677151.1| hypothetical protein AMCSP05_001043 [Streptococcus pneumoniae
2070425]
gi|421222642|ref|ZP_15679429.1| hypothetical protein AMCSP14_001065 [Streptococcus pneumoniae
2070531]
gi|421231901|ref|ZP_15688545.1| hypothetical protein AMCSP16_001058 [Streptococcus pneumoniae
2080076]
gi|421243084|ref|ZP_15699603.1| hypothetical protein AMCSP09_001314 [Streptococcus pneumoniae
2081074]
gi|421247419|ref|ZP_15703905.1| hypothetical protein AMCSP18_001369 [Streptococcus pneumoniae
2082170]
gi|421270518|ref|ZP_15721374.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR48]
gi|421272734|ref|ZP_15723577.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR55]
gi|421278937|ref|ZP_15729745.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17301]
gi|421281121|ref|ZP_15731919.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA04672]
gi|421294440|ref|ZP_15745163.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA56113]
gi|421298596|ref|ZP_15749284.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA60080]
gi|421301024|ref|ZP_15751694.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA19998]
gi|421309576|ref|ZP_15760203.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA62681]
gi|444409972|ref|ZP_21206536.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0076]
gi|444413375|ref|ZP_21209691.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0153]
gi|444423525|ref|ZP_21219124.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0446]
gi|14972633|gb|AAK75264.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
gi|147927174|gb|EDK78210.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP9-BS68]
gi|172043516|gb|EDT51562.1| GTP-binding protein [Streptococcus pneumoniae CDC1873-00]
gi|183572498|gb|EDT93026.1| GTP-binding protein [Streptococcus pneumoniae SP195]
gi|183573327|gb|EDT93855.1| GTP-binding protein [Streptococcus pneumoniae CDC0288-04]
gi|183576748|gb|EDT97276.1| GTP-binding protein [Streptococcus pneumoniae CDC3059-06]
gi|220674329|emb|CAR68875.1| putative GTPase protein [Streptococcus pneumoniae ATCC 700669]
gi|225721097|gb|ACO16951.1| GTP-binding protein [Streptococcus pneumoniae 70585]
gi|225723566|gb|ACO19419.1| GTP-binding protein [Streptococcus pneumoniae JJA]
gi|225724745|gb|ACO20597.1| GTP-binding protein [Streptococcus pneumoniae P1031]
gi|301794257|emb|CBW36678.1| putative GTPase protein [Streptococcus pneumoniae INV104]
gi|332073500|gb|EGI83979.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17570]
gi|332201626|gb|EGJ15696.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47368]
gi|332203011|gb|EGJ17079.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47901]
gi|353747819|gb|EHD28475.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 4027-06]
gi|353750336|gb|EHD30977.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11184]
gi|353753140|gb|EHD33764.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 6735-05]
gi|353762218|gb|EHD42781.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA43265]
gi|353763890|gb|EHD44440.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44452]
gi|353769867|gb|EHD50383.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 6901-05]
gi|353777285|gb|EHD57758.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44500]
gi|353779762|gb|EHD60226.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41410]
gi|353782337|gb|EHD62771.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA49447]
gi|353784356|gb|EHD64777.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41538]
gi|353786220|gb|EHD66633.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 5787-06]
gi|353789850|gb|EHD70242.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 6963-05]
gi|353796576|gb|EHD76915.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44511]
gi|353796761|gb|EHD77099.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44378]
gi|353800461|gb|EHD80775.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP170]
gi|353803613|gb|EHD83905.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA07643]
gi|353828251|gb|EHE08394.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17328]
gi|353834365|gb|EHE14466.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA19077]
gi|353838334|gb|EHE18412.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41277]
gi|353841793|gb|EHE21846.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41437]
gi|353844950|gb|EHE24993.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41565]
gi|353850887|gb|EHE30891.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA43380]
gi|353852395|gb|EHE32384.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47360]
gi|353857612|gb|EHE37575.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47388]
gi|353859750|gb|EHE39700.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47439]
gi|353871627|gb|EHE51498.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA54644]
gi|353872181|gb|EHE52047.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae
Netherlands15B-37]
gi|353875554|gb|EHE55406.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP127]
gi|353876137|gb|EHE55987.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47751]
gi|353888325|gb|EHE68100.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae EU-NP01]
gi|353888604|gb|EHE68378.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA08780]
gi|353894471|gb|EHE74213.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353901804|gb|EHE77336.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11663]
gi|353902439|gb|EHE77969.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA11426]
gi|379532095|gb|EHY97326.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02270]
gi|379532147|gb|EHY97377.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02714]
gi|379537676|gb|EHZ02858.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA04175]
gi|379547105|gb|EHZ12243.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA06083]
gi|379552710|gb|EHZ17799.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13430]
gi|379558157|gb|EHZ23193.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA14373]
gi|379567199|gb|EHZ32186.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA18068]
gi|379575646|gb|EHZ40576.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40183]
gi|379580007|gb|EHZ44903.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40410]
gi|379583485|gb|EHZ48362.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA43257]
gi|379587474|gb|EHZ52322.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA43264]
gi|379590246|gb|EHZ55084.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA44386]
gi|379595192|gb|EHZ60001.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47210]
gi|379600793|gb|EHZ65572.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47522]
gi|379611950|gb|EHZ76672.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA49542]
gi|379630285|gb|EHZ94873.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP05]
gi|381309912|gb|EIC50745.1| hypothetical protein CGSSpSV36_0939 [Streptococcus pneumoniae SV36]
gi|381316847|gb|EIC57589.1| hypothetical protein CGSSp4595_1051 [Streptococcus pneumoniae
459-5]
gi|381317825|gb|EIC58550.1| hypothetical protein CGSSpSV35_1221 [Streptococcus pneumoniae SV35]
gi|383350883|gb|EID28730.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudopneumoniae ATCC BAA-960]
gi|383715045|gb|EID71027.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pseudopneumoniae SK674]
gi|395587682|gb|EJG48026.1| hypothetical protein AMCSP05_001043 [Streptococcus pneumoniae
2070425]
gi|395587844|gb|EJG48184.1| hypothetical protein AMCSP14_001065 [Streptococcus pneumoniae
2070531]
gi|395595930|gb|EJG56156.1| hypothetical protein AMCSP16_001058 [Streptococcus pneumoniae
2080076]
gi|395608672|gb|EJG68764.1| hypothetical protein AMCSP09_001314 [Streptococcus pneumoniae
2081074]
gi|395614240|gb|EJG74261.1| hypothetical protein AMCSP18_001369 [Streptococcus pneumoniae
2082170]
gi|395868313|gb|EJG79431.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR48]
gi|395875628|gb|EJG86708.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR55]
gi|395880370|gb|EJG91423.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17301]
gi|395882282|gb|EJG93329.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA04672]
gi|395894730|gb|EJH05710.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA56113]
gi|395898584|gb|EJH09528.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA19998]
gi|395902552|gb|EJH13485.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA60080]
gi|395910997|gb|EJH21866.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA62681]
gi|444273534|gb|ELU79207.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0153]
gi|444278463|gb|ELU83910.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0076]
gi|444286782|gb|ELU91742.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0446]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|417849129|ref|ZP_12495055.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK1080]
gi|339457126|gb|EGP69706.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK1080]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|417938285|ref|ZP_12581583.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis SK970]
gi|343391375|gb|EGV03950.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis SK970]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ R+L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIIGDKPRLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L ++ +++ +G+ +R
Sbjct: 64 ADPALTKEWRQYFESQGIQTLAINSKEQITVKVVTDAAKKLMAEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|410476458|ref|YP_006743217.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|419482192|ref|ZP_14021984.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40563]
gi|421206625|ref|ZP_15663680.1| hypothetical protein AMCSP20_001190 [Streptococcus pneumoniae
2090008]
gi|421229801|ref|ZP_15686469.1| hypothetical protein AMCSP01_001172 [Streptococcus pneumoniae
2061376]
gi|421292077|ref|ZP_15742813.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA56348]
gi|421311988|ref|ZP_15762592.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA58981]
gi|444388674|ref|ZP_21186651.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS125219]
gi|444389726|ref|ZP_21187641.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS70012]
gi|444392456|ref|ZP_21190180.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS81218]
gi|444395264|ref|ZP_21192810.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0002]
gi|444397608|ref|ZP_21195091.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0006]
gi|444403041|ref|ZP_21200162.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0008]
gi|444405848|ref|ZP_21202693.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0009]
gi|444407230|ref|ZP_21203897.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0010]
gi|444417011|ref|ZP_21213075.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0360]
gi|444419475|ref|ZP_21215335.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0427]
gi|379580328|gb|EHZ45221.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40563]
gi|395575422|gb|EJG35990.1| hypothetical protein AMCSP20_001190 [Streptococcus pneumoniae
2090008]
gi|395595361|gb|EJG55593.1| hypothetical protein AMCSP01_001172 [Streptococcus pneumoniae
2061376]
gi|395893075|gb|EJH04064.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA56348]
gi|395910729|gb|EJH21599.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA58981]
gi|406369403|gb|AFS43093.1| GTP-binding protein [Streptococcus pneumoniae gamPNI0373]
gi|444248554|gb|ELU55059.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS125219]
gi|444256189|gb|ELU62527.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS70012]
gi|444258583|gb|ELU64905.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0002]
gi|444260265|gb|ELU66573.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0006]
gi|444263351|gb|ELU69533.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PCS81218]
gi|444265368|gb|ELU71381.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0008]
gi|444270826|gb|ELU76577.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0010]
gi|444272140|gb|ELU77876.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0009]
gi|444284668|gb|ELU89789.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0360]
gi|444286762|gb|ELU91723.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0427]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|169834320|ref|YP_001694595.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae Hungary19A-6]
gi|168996822|gb|ACA37434.1| GTP-binding protein [Streptococcus pneumoniae Hungary19A-6]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|444400229|ref|ZP_21197643.1| ribosome biogenesis GTP-binding protein YlqF, partial
[Streptococcus pneumoniae PNI0007]
gi|444266957|gb|ELU72883.1| ribosome biogenesis GTP-binding protein YlqF, partial
[Streptococcus pneumoniae PNI0007]
Length = 281
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|418976576|ref|ZP_13524444.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK575]
gi|383351328|gb|EID29134.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK575]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|421872826|ref|ZP_16304443.1| ribosome biogenesis GTP-binding protein YlqF [Brevibacillus
laterosporus GI-9]
gi|372458241|emb|CCF13992.1| ribosome biogenesis GTP-binding protein YlqF [Brevibacillus
laterosporus GI-9]
Length = 273
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 115/188 (61%)
Query: 123 VVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFAKQGTKVIFS 182
+VIE+ DAR+PLS+ +P++D+ + + R+++LN+ D+ + W YF +QG + +
Sbjct: 1 MVIELLDARLPLSSRNPMIDEIVAEKPRLILLNKADLADPSVTEMWVRYFKEQGLRTLPI 60
Query: 183 NGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSLINRLLKRRM 242
+ G G KL L + LASD+ KR +G+L RAVR I+G PNVGKSSLINRL KR +
Sbjct: 61 DALSGRGVNKLPELCQELASDMLQKRADRGMLARAVRIMILGIPNVGKSSLINRLAKRSV 120
Query: 243 CPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIGERSYDVADV 302
RP VT+ +WV+ G LE LD+PGI+ + DQ ++LA I + D ++V
Sbjct: 121 AQTGDRPAVTKSQQWVKMGDTLELLDTPGILWPKFEDQMVGLRLAASGAIKDELIDFSEV 180
Query: 303 AAILVQML 310
A V+ +
Sbjct: 181 ALYAVRYM 188
>gi|322385536|ref|ZP_08059180.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
cristatus ATCC 51100]
gi|417921041|ref|ZP_12564536.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
cristatus ATCC 51100]
gi|321270274|gb|EFX53190.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
cristatus ATCC 51100]
gi|342834961|gb|EGU69219.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
cristatus ATCC 51100]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQESIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G K + N + K++ AK L +D ++R +G+ +R
Sbjct: 64 ADPTLTKEWQAYFESRGIKTLAINSKEQSAVKKVTEAAKKLMADKLARQRERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EMVALKLALT 193
>gi|289167906|ref|YP_003446175.1| GTP-binding protein [Streptococcus mitis B6]
gi|288907473|emb|CBJ22310.1| GTP-binding protein [Streptococcus mitis B6]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|421277395|ref|ZP_15728215.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SPAR10]
gi|395876676|gb|EJG87752.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SPAR10]
Length = 283
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ R+L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIIGDKPRLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPALTKEWRQHFESQGIQTLAINSKEQITVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|116333442|ref|YP_794969.1| GTPase [Lactobacillus brevis ATCC 367]
gi|116098789|gb|ABJ63938.1| Ras superfamily GTP-binding protein YlqF [Lactobacillus brevis ATCC
367]
Length = 286
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 124/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++ + L+D+V E+ DARIP ++ +P + + N+ +++L ++D+
Sbjct: 4 IQWFPGHMAKAIRQMEENIHLVDIVFELVDARIPAASRNPEVTRIAKNKPHLIILTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW Y+ +Q I + + + +++++A ++ +D ++KGL R +R
Sbjct: 64 ADPQQTAAWLAYYREQHQPAIAIDSRANVTPKQITKIAASILADKLAAEKAKGLKERPMR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L++R+ PGVT+ +W+R K LE LD+PGI+ + D
Sbjct: 124 AMTVGVPNVGKSTLLNHLVQRKAAQVGDTPGVTKGQQWLRSSKHLELLDTPGILWPKFKD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q A KLA+ I E+ Y DVA
Sbjct: 184 QETAQKLALTGAIKEKLYAKDDVA 207
>gi|418967252|ref|ZP_13518922.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK616]
gi|383344786|gb|EID22938.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK616]
Length = 283
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAITKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|417924417|ref|ZP_12567859.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK569]
gi|342835941|gb|EGU70168.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
SK569]
Length = 283
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAITKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|149025508|ref|ZP_01836441.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP23-BS72]
gi|418102736|ref|ZP_12739811.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP070]
gi|419475537|ref|ZP_14015377.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA14688]
gi|419486690|ref|ZP_14026455.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA44128]
gi|421209001|ref|ZP_15666017.1| hypothetical protein AMCSP11_001185 [Streptococcus pneumoniae
2070005]
gi|421225031|ref|ZP_15681771.1| hypothetical protein AMCSP06_001164 [Streptococcus pneumoniae
2070768]
gi|421240691|ref|ZP_15697237.1| hypothetical protein AMCSP17_001092 [Streptococcus pneumoniae
2080913]
gi|147929380|gb|EDK80377.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP23-BS72]
gi|353776224|gb|EHD56702.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae NP070]
gi|379561082|gb|EHZ26103.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA14688]
gi|379587323|gb|EHZ52172.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA44128]
gi|395574206|gb|EJG34786.1| hypothetical protein AMCSP11_001185 [Streptococcus pneumoniae
2070005]
gi|395589726|gb|EJG50042.1| hypothetical protein AMCSP06_001164 [Streptococcus pneumoniae
2070768]
gi|395608482|gb|EJG68576.1| hypothetical protein AMCSP17_001092 [Streptococcus pneumoniae
2080913]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETFR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|444414111|ref|ZP_21210415.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0199]
gi|444283189|gb|ELU88395.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae PNI0199]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|332523230|ref|ZP_08399482.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
porcinus str. Jelinkova 176]
gi|332314494|gb|EGJ27479.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
porcinus str. Jelinkova 176]
Length = 287
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W ++ +G K + N + K++ A+AL +D K R +G+ +R
Sbjct: 64 ADQSRTKEWQQFYESKGIKTLAINSKEQATVKKVTDAARALMTDKIAKLRQRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QVVGLKLALTGAIKDQ 199
>gi|331266373|ref|YP_004326003.1| GTP-binding protein, ribosomal biogenesis GTPase [Streptococcus
oralis Uo5]
gi|326683045|emb|CBZ00662.1| GTP-binding protein, ribosomal biogenesis GTPase [Streptococcus
oralis Uo5]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|422848671|ref|ZP_16895347.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK115]
gi|325689692|gb|EGD31696.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK115]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L SD +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMSDKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|42519031|ref|NP_964961.1| hypothetical protein LJ1105 [Lactobacillus johnsonii NCC 533]
gi|41583318|gb|AAS08927.1| hypothetical protein LJ_1105 [Lactobacillus johnsonii NCC 533]
Length = 279
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 117/213 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+DV+IEV DAR+P+S+ +P++ Q + I+VLN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ +G VI + Q L ++ K + K +KG +R
Sbjct: 64 ADPIQTKKWTHYYQDEGNFVISMDAQHTTNMTSLFKIIKLAGKEKTDKLIAKGASNPMIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INR++ R +PGVTR W++ +++ LD+PGI+ + SD
Sbjct: 124 VAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA C I + DVA +++ L +
Sbjct: 184 QEVGYKLAACGAIKADIFHPDDVALFVIEFLKQ 216
>gi|385260394|ref|ZP_10038542.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
SK140]
gi|385191658|gb|EIF39071.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
SK140]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ R+L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIIGDKPRLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPALTKEWRQHFESQGIQTLAINSKEQITVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|417935868|ref|ZP_12579185.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis X]
gi|343402777|gb|EGV15282.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis X]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ R+L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIIGDKPRLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPALTKEWRQHFESQGIQTLAINSKEQITVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|157151133|ref|YP_001450489.1| ribosomal biogenesis GTPase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075927|gb|ABV10610.1| GTP-binding protein [Streptococcus gordonii str. Challis substr.
CH1]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G + ++LVLN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQESIKFVDFVTVLVDARLPLSSQNPMLTKIVGEKPKLLVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRLKEWQTYFEGQGIPTLALNSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|322387851|ref|ZP_08061459.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis ATCC 700779]
gi|419843911|ref|ZP_14367216.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis ATCC 700779]
gi|321141353|gb|EFX36850.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis ATCC 700779]
gi|385702335|gb|EIG39480.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis ATCC 700779]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ R+L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIIGDKPRLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W +F QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPALTKEWRQHFESQGIQTLAINSKEQITVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|239631518|ref|ZP_04674549.1| ras superfamily protein-binding protein YlqF [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|417980689|ref|ZP_12621369.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei 12A]
gi|239525983|gb|EEQ64984.1| ras superfamily protein-binding protein YlqF [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|410525012|gb|EKP99919.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei 12A]
Length = 286
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 125/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDIVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|153954033|ref|YP_001394798.1| ribosomal biogenesis GTPase [Clostridium kluyveri DSM 555]
gi|219854647|ref|YP_002471769.1| hypothetical protein CKR_1304 [Clostridium kluyveri NBRC 12016]
gi|146346914|gb|EDK33450.1| Predicted GTP-binding protein [Clostridium kluyveri DSM 555]
gi|219568371|dbj|BAH06355.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 280
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 127/213 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+A+T++E+K+ LKL+DVV+E+RDARI ++ +P ++ G++ RI++LN+ D+
Sbjct: 3 INWFPGHMARTKREIKENLKLVDVVVEIRDARIIKASKNPDIESICGSKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +Y + +V+ N G G + + L + + + + KG+ R
Sbjct: 63 SEESITKQWISYLLEDNVRVLAVNCNTGQGLKSIRPMLNELLEEKHNRMKKKGVAKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ K + RPGVT+ +W++ +E +D+PGI+ ++
Sbjct: 123 AMVVGIPNVGKSSFINKMAKSSIAKIGDRPGVTKSKQWIKTKLGIELMDTPGILWPKLES 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LA I + D+ ++A +L+++L R
Sbjct: 183 EETQLNLAFTGAIKDEIMDIENLALMLLKVLCR 215
>gi|419779267|ref|ZP_14305143.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK10]
gi|383186295|gb|EIC78765.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK10]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|293365453|ref|ZP_06612162.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
ATCC 35037]
gi|307703409|ref|ZP_07640351.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|322375249|ref|ZP_08049762.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
C300]
gi|419780107|ref|ZP_14305957.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK100]
gi|291315821|gb|EFE56265.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
ATCC 35037]
gi|307622816|gb|EFO01811.1| conserved hypothetical protein [Streptococcus oralis ATCC 35037]
gi|321279512|gb|EFX56552.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
C300]
gi|383185266|gb|EIC77762.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK100]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|417934676|ref|ZP_12577996.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
bv. 2 str. F0392]
gi|340771246|gb|EGR93761.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
bv. 2 str. F0392]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
A+KLA+ I ++
Sbjct: 184 DTVALKLALTGAIKDQ 199
>gi|315613172|ref|ZP_07888082.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis ATCC 49296]
gi|315314734|gb|EFU62776.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis ATCC 49296]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|422327403|ref|ZP_16408430.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 6_1_45]
gi|371663243|gb|EHO28433.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 6_1_45]
Length = 288
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 131/211 (62%), Gaps = 12/211 (5%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++++L ++D+VIE+RDARIP ++ +P++++ N+ R++VL+++D
Sbjct: 8 IQWFPGHMTKAKREMQEKLNMVDMVIELRDARIPSASKNPMIEELCQNKPRLIVLSKKDK 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKA-----LASDVNVKR-RSKGL 213
A W + + T+V+ + +K + +A+ L ++R + +G+
Sbjct: 68 ADAAATKLWCSALQNETTRVV------ALDILKENIIARIVEESRLLMQAKIERMKRRGI 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
PR +RA +VG PNVGKS+ INR+ K+++ RPGVTR L+W + ++LE LD+PG++
Sbjct: 122 RPRTIRAMVVGVPNVGKSTFINRISKKKVAVTGDRPGVTRALQWSKVNQNLELLDTPGVL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAA 304
+ D+ + LAI I + + ++AA
Sbjct: 182 WSKFEDETVGVLLAITGAIRDEILPLEEIAA 212
>gi|182416692|ref|ZP_02948093.1| GTP-binding protein [Clostridium butyricum 5521]
gi|237667586|ref|ZP_04527570.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182379454|gb|EDT76947.1| GTP-binding protein [Clostridium butyricum 5521]
gi|237655934|gb|EEP53490.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 293
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 120/213 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+K+ LKL+D VIE+RDARIP S+ +P +D+ L + RI++LN+ D+
Sbjct: 3 INWFPGHMRKTQREIKENLKLVDAVIEIRDARIPRSSANPDIDKLLEGKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y KV+ N G G + L + + + ++KG+ R
Sbjct: 63 TDSKVTKEWIDYLTNDNVKVLEVNCLKGEGLKAIKPALLNLLKEKHDRLKAKGMAKIITR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN++ + + RPGVT+ +W++ +E LD+PG++ + D
Sbjct: 123 VMVVGIPNVGKSTFINKMARNNIAKTGDRPGVTKSKQWIKTAIGIELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
A+ LA I + D+ ++A LV+ L +
Sbjct: 183 DTTALNLAFTGAIKDEIMDIEELALKLVERLQK 215
>gi|306833476|ref|ZP_07466603.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus bovis
ATCC 700338]
gi|336064249|ref|YP_004559108.1| ribosomal biogenesis GTPase [Streptococcus pasteurianus ATCC 43144]
gi|304424246|gb|EFM27385.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus bovis
ATCC 700338]
gi|334282449|dbj|BAK30022.1| ribosomal biogenesis GTPase [Streptococcus pasteurianus ATCC 43144]
Length = 284
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG K + N + ++ AK+L +D K R +G+ +R
Sbjct: 64 ADSNRTKEWRNYFEKQGIKTLAVNSKEQATVKLVTDAAKSLMADKLAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 EIVGLKLALTGAIKDQ 199
>gi|419782252|ref|ZP_14308061.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK610]
gi|421488624|ref|ZP_15936012.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK304]
gi|383183356|gb|EIC75893.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK610]
gi|400367841|gb|EJP20856.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus oralis
SK304]
Length = 283
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|424827560|ref|ZP_18252347.1| GTPase YlqF [Clostridium sporogenes PA 3679]
gi|365980000|gb|EHN16041.1| GTPase YlqF [Clostridium sporogenes PA 3679]
Length = 299
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPEIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 AMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKMDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|227889893|ref|ZP_04007698.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|268319576|ref|YP_003293232.1| hypothetical protein FI9785_1101 [Lactobacillus johnsonii FI9785]
gi|227849337|gb|EEJ59423.1| GTP-binding protein [Lactobacillus johnsonii ATCC 33200]
gi|262397951|emb|CAX66965.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 279
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 117/213 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+DV+IEV DAR+P+S+ +P++ Q + I+VLN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ +G VI + Q L ++ K + K +KG +R
Sbjct: 64 ADPIQTKKWTRYYQDEGNFVISMDAQHTTNMTSLFKIIKLAGKEKTDKLIAKGASNPMIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INR++ R +PGVTR W++ +++ LD+PGI+ + SD
Sbjct: 124 VAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA C I + DVA +++ L +
Sbjct: 184 QEVGYKLAACGAIKADIFHPDDVALFVIEFLKQ 216
>gi|417837634|ref|ZP_12483872.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
johnsonii pf01]
gi|338761177|gb|EGP12446.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
johnsonii pf01]
Length = 279
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 117/213 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+D++IEV DAR+P+S+ +P++ Q + I+VLN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDILIEVLDARLPVSSRNPMIGQLTKKKPHIIVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ +G VI + Q L ++ K + K +KG +R
Sbjct: 64 ADPIQTKKWTRYYQDEGNFVISMDAQHNTNMTSLFKIIKLAGKEKTDKLIAKGASNPMIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INR++ R +PGVTR W++ +++ LD+PGI+ + SD
Sbjct: 124 VAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA C I + DVA +++ L +
Sbjct: 184 QEVGYKLAACGAIKADIFHPDDVALFVIEFLKQ 216
>gi|238855691|ref|ZP_04645988.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 269-3]
gi|260664446|ref|ZP_05865298.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii SJ-7A-US]
gi|313472153|ref|ZP_07812645.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 1153]
gi|238831676|gb|EEQ24016.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 269-3]
gi|239529525|gb|EEQ68526.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii 1153]
gi|260561511|gb|EEX27483.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
jensenii SJ-7A-US]
Length = 280
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +PL+ +G++ I++LN+ D+
Sbjct: 3 IQWYPGHMNKARVQLEDKLSLLDVIVEVVDARIPASSRNPLISDIVGDKPHIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N W G V+ + Q L +L K A + K +KG +R
Sbjct: 63 ADPNEINKWEAKLKSDGKFVLKLDAQHNTNMTPLFKLIKLAAKERIDKLEAKGASNPTIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++INRL+ R + RPGVT+ W++ + ++ LD+PGI+ + D
Sbjct: 123 ICLVGIPNCGKSTIINRLVGRNVAIVGDRPGVTKGQSWLKTSESVQILDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +LA I E + DVA +++ L
Sbjct: 183 QAVGFRLAALGSIKESVFHADDVALFVMEYL 213
>gi|187778965|ref|ZP_02995438.1| hypothetical protein CLOSPO_02560 [Clostridium sporogenes ATCC
15579]
gi|187772590|gb|EDU36392.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
sporogenes ATCC 15579]
Length = 299
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPEIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 AMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKMDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|401683098|ref|ZP_10814987.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
AS14]
gi|400183780|gb|EJO18031.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
AS14]
Length = 283
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADSVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKNLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|148998410|ref|ZP_01825852.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP11-BS70]
gi|225861096|ref|YP_002742605.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230995|ref|ZP_06964676.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255437|ref|ZP_06979023.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502842|ref|YP_003724782.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|307067683|ref|YP_003876649.1| putative GTPase [Streptococcus pneumoniae AP200]
gi|387788308|ref|YP_006253376.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae ST556]
gi|417312595|ref|ZP_12099307.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA04375]
gi|418076302|ref|ZP_12713540.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47502]
gi|418083062|ref|ZP_12720262.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44288]
gi|418085205|ref|ZP_12722387.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47281]
gi|418093850|ref|ZP_12730979.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA49138]
gi|418100194|ref|ZP_12737282.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 7286-06]
gi|418119865|ref|ZP_12756816.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA18523]
gi|418141608|ref|ZP_12778421.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13455]
gi|418150615|ref|ZP_12787364.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA14798]
gi|418152758|ref|ZP_12789498.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16121]
gi|418157500|ref|ZP_12794216.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16833]
gi|418164416|ref|ZP_12801088.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17371]
gi|418171346|ref|ZP_12807971.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA19451]
gi|418195374|ref|ZP_12831854.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47688]
gi|418197961|ref|ZP_12834423.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47778]
gi|418223113|ref|ZP_12849755.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 5185-06]
gi|418227602|ref|ZP_12854221.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 3063-00]
gi|419425160|ref|ZP_13965358.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 7533-05]
gi|419427112|ref|ZP_13967295.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 5652-06]
gi|419429290|ref|ZP_13969457.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA11856]
gi|419436003|ref|ZP_13976095.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 8190-05]
gi|419438236|ref|ZP_13978306.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13499]
gi|419444653|ref|ZP_13984668.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA19923]
gi|419446789|ref|ZP_13986794.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 7879-04]
gi|419448772|ref|ZP_13988769.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 4075-00]
gi|419451475|ref|ZP_13991461.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP02]
gi|419501748|ref|ZP_14041434.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47628]
gi|419518929|ref|ZP_14058536.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA08825]
gi|419528549|ref|ZP_14068091.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17719]
gi|421234138|ref|ZP_15690759.1| hypothetical protein AMCSP02_001139 [Streptococcus pneumoniae
2061617]
gi|421249446|ref|ZP_15705906.1| hypothetical protein AMCSP19_001070 [Streptococcus pneumoniae
2082239]
gi|421287527|ref|ZP_15738293.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA58771]
gi|421314308|ref|ZP_15764898.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47562]
gi|147755807|gb|EDK62852.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP11-BS70]
gi|225726497|gb|ACO22348.1| GTP-binding protein [Streptococcus pneumoniae Taiwan19F-14]
gi|298238437|gb|ADI69568.1| GTP-binding protein [Streptococcus pneumoniae TCH8431/19A]
gi|306409220|gb|ADM84647.1| Predicted GTPase [Streptococcus pneumoniae AP200]
gi|327389303|gb|EGE87648.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA04375]
gi|353749429|gb|EHD30074.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47502]
gi|353756091|gb|EHD36693.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA44288]
gi|353757160|gb|EHD37754.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47281]
gi|353765726|gb|EHD46268.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA49138]
gi|353772903|gb|EHD53402.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 7286-06]
gi|353788978|gb|EHD69374.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA18523]
gi|353805859|gb|EHD86133.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13455]
gi|353815399|gb|EHD95617.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA14798]
gi|353819403|gb|EHD99601.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16121]
gi|353823948|gb|EHE04122.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA16833]
gi|353831693|gb|EHE11818.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17371]
gi|353835863|gb|EHE15954.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA19451]
gi|353861901|gb|EHE41834.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47688]
gi|353863701|gb|EHE43623.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47778]
gi|353879731|gb|EHE59554.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 5185-06]
gi|353883203|gb|EHE63012.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae 3063-00]
gi|379138050|gb|AFC94841.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae ST556]
gi|379538241|gb|EHZ03422.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13499]
gi|379551238|gb|EHZ16333.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA11856]
gi|379564572|gb|EHZ29568.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17719]
gi|379572346|gb|EHZ37303.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA19923]
gi|379602109|gb|EHZ66881.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47628]
gi|379614329|gb|EHZ79039.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 7879-04]
gi|379615845|gb|EHZ80550.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 8190-05]
gi|379618565|gb|EHZ83240.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 5652-06]
gi|379620047|gb|EHZ84713.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 7533-05]
gi|379623180|gb|EHZ87814.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP02]
gi|379623830|gb|EHZ88463.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae 4075-00]
gi|379641908|gb|EIA06443.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA08825]
gi|395601894|gb|EJG62040.1| hypothetical protein AMCSP02_001139 [Streptococcus pneumoniae
2061617]
gi|395614067|gb|EJG74089.1| hypothetical protein AMCSP19_001070 [Streptococcus pneumoniae
2082239]
gi|395889936|gb|EJH00943.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA58771]
gi|395914808|gb|EJH25652.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47562]
Length = 283
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLIKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|224541329|ref|ZP_03681868.1| hypothetical protein CATMIT_00489 [Catenibacterium mitsuokai DSM
15897]
gi|224525766|gb|EEF94871.1| ribosome biogenesis GTP-binding protein YlqF [Catenibacterium
mitsuokai DSM 15897]
Length = 292
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 114/193 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++E++ +LKL+D+VIE+ DAR P ST +P +D + N+ R+ +L ++D+
Sbjct: 11 IQWYPGHMAKAQREIESKLKLVDIVIELVDARAPFSTHNPELDHMIKNKPRLYILTKKDL 70
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A F +QG I + + K+ + + + K ++GL P+ +R
Sbjct: 71 ADPKATEALIAEFKRQGHSAIAVDLKNFKEEKKIVNMCRYQLKEKREKEAARGLKPKPIR 130
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+ IN++ KR+ +PGVT+ + +R KD E D+PG++ + +D
Sbjct: 131 ALVAGIPNVGKSTFINKIAKRKAAAVGNKPGVTKAQQIIRVDKDFELFDTPGVLEPKFTD 190
Query: 280 QAAAIKLAICDDI 292
A+ +A+C I
Sbjct: 191 INKAMNVALCGSI 203
>gi|422858458|ref|ZP_16905108.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1057]
gi|327460344|gb|EGF06681.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1057]
Length = 283
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGISTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|307706601|ref|ZP_07643408.1| conserved hypothetical protein [Streptococcus mitis SK321]
gi|307618056|gb|EFN97216.1| conserved hypothetical protein [Streptococcus mitis SK321]
Length = 283
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF +G + + N + + ++ AK L +D ++R +G+ +R
Sbjct: 64 ADPAITKEWRQYFESKGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQRERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|336113791|ref|YP_004568558.1| HSR1-like GTP-binding protein [Bacillus coagulans 2-6]
gi|335367221|gb|AEH53172.1| GTP-binding protein HSR1-related protein [Bacillus coagulans 2-6]
Length = 270
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 125/206 (60%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+AK +E+ ++LKL+D+V E+ DARIP+S+++P++D+ + + RI +LN+ DM A
Sbjct: 1 MAKARREVTEKLKLVDIVFELLDARIPVSSSNPMLDELIQQKPRIKLLNKADMADPAATA 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
W + T V+ + Q G G K+ +LA+ + + R+KG+ PRA+RA IVG P
Sbjct: 61 RWLEILSGGNTHVLAIDAQSGKGLDKMVKLAEQILQPKWERLRAKGIRPRAIRAMIVGIP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+LINRL + + PGVT+ W++ GK +E LD+PGI+ + D+ KL
Sbjct: 121 NVGKSTLINRLAGKNIAKTGNTPGVTKAQAWIKVGKTMELLDTPGILWPKFEDKETGYKL 180
Query: 287 AICDDIGERSYDVADVAAILVQMLAR 312
A+ I + ++ DV+ ++ L +
Sbjct: 181 ALTGAIKDTILNLQDVSVFGLRFLEK 206
>gi|326803549|ref|YP_004321367.1| ribosome biogenesis GTP-binding protein YlqF [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650327|gb|AEA00510.1| ribosome biogenesis GTP-binding protein YlqF [Aerococcus urinae
ACS-120-V-Col10a]
Length = 293
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++++QLK +D V+E+RDARIP+++ +PL+DQ + +KR++VLN+ D+
Sbjct: 4 IQWFPGHMAKAKRQVQEQLKSVDWVVEIRDARIPIASKNPLIDQIIQQKKRLIVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + T I + + KL + K KG+ + +R
Sbjct: 64 ADPNQNKLWLNHLRNKDTDAIAIDSKNNKEIKKLRHYLLEVTGGERQKWLDKGMKQKTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
++G PNVGKS+LIN+L ++ RPGVT+ +WV+ KD LD+PGI+ + D
Sbjct: 124 LMVLGIPNVGKSTLINQLTHKKSAKVGNRPGVTKGQQWVQIDKDFSLLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA+ I + Y D+A +Q +
Sbjct: 184 PLVGMNLALTGAIKDTHYYSDDIALYAMQFM 214
>gi|227432241|ref|ZP_03914237.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
gi|227352014|gb|EEJ42244.1| GTP-binding protein [Leuconostoc mesenteroides subsp. cremoris ATCC
19254]
Length = 284
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 124/209 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ D+RIP S+ +P +D+ +GN+ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDSRIPKSSRNPEVDKLIGNKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F QG V+ + + +++ A+ + +KG+ + +R
Sbjct: 65 ADPDQTRAWKKHFEAQGYTVLVLDTRDPRTPQLVTKAARRAVEAKKAAQLAKGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+NRL+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMISGVPNVGKSTLLNRLVMKNVAPTADRPGVTKKIVWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
Q +KLA+ + + + D A L+
Sbjct: 185 QNIGMKLALTGAVKDTIFAKDDAALFLIN 213
>gi|358464945|ref|ZP_09174903.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
oral taxon 058 str. F0407]
gi|357066474|gb|EHI76624.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
oral taxon 058 str. F0407]
Length = 283
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
A+KLA+ I ++
Sbjct: 184 DTIALKLALTGAIKDQ 199
>gi|407795754|ref|ZP_11142712.1| ribosomal biogenesis GTPase [Salimicrobium sp. MJ3]
gi|407020095|gb|EKE32809.1| ribosomal biogenesis GTPase [Salimicrobium sp. MJ3]
Length = 279
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +E+K+ LKL+D VIE+ DAR PLS+ +P++ + + ++ +++V+ ++D+
Sbjct: 3 IQWYPGHMAKARREVKENLKLVDFVIELVDARAPLSSQNPMLQEEIQDKPKLVVMMKQDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF + + + K++ ++ + + K+R+KG+ PR R
Sbjct: 63 ADPGVTKEWIDYFDSTFSHAVAVDVNNPKNIQKIAEASRQITEEKLEKQRAKGVNPRNPR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PNVGKSSLINRL ++ +PGVT+ +W++ + E LD+PGI+ + +
Sbjct: 123 AMIVGIPNVGKSSLINRLAHKKKAETGDKPGVTKKQQWIKVKNEFELLDTPGILWPKFEE 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +LA I ++ +VA ++ L
Sbjct: 183 EVTGFRLAAIGTIKDQVLPQDEVAIFILNHL 213
>gi|262282235|ref|ZP_06060003.1| ribosomal biogenesis GTPase [Streptococcus sp. 2_1_36FAA]
gi|262261526|gb|EEY80224.1| ribosomal biogenesis GTPase [Streptococcus sp. 2_1_36FAA]
Length = 283
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQESIKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRLKEWQTYFEGQGIPTLALNSKEQSAVKKVTDAAKKLMADKLARQKGRGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EMVALKLALT 193
>gi|191638394|ref|YP_001987560.1| GTP-binding protein [Lactobacillus casei BL23]
gi|385820096|ref|YP_005856483.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus casei
LC2W]
gi|385823296|ref|YP_005859638.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus casei
BD-II]
gi|409997259|ref|YP_006751660.1| ribosome biogenesis GTPase A [Lactobacillus casei W56]
gi|418007989|ref|ZP_12647860.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei UW4]
gi|190712696|emb|CAQ66702.1| GTP-binding protein [Lactobacillus casei BL23]
gi|327382423|gb|AEA53899.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus casei
LC2W]
gi|327385623|gb|AEA57097.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus casei
BD-II]
gi|406358271|emb|CCK22541.1| Ribosome biogenesis GTPase A [Lactobacillus casei W56]
gi|410547748|gb|EKQ21974.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei UW4]
Length = 286
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 125/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|258511349|ref|YP_003184783.1| ribosome biogenesis GTP-binding protein YlqF [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478075|gb|ACV58394.1| ribosome biogenesis GTP-binding protein YlqF [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 292
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 2/217 (0%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QW+PGH+AK ++ + ++L+ +DVV+E+ DAR+P+S+ P++D+ N+ R++VL R D
Sbjct: 2 PIQWFPGHMAKAKRLMAEELRGIDVVVELADARLPVSSRSPVLDELARNKPRLMVLTRVD 61
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+ W F ++G I N + G G + R + R++G+
Sbjct: 62 LADPHCTEQWVERFQREGVIAIPVNARTGQGLREFRRALDEFVEAKMNRARARGIERAVT 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R I G PNVGKS+ +N+L R + RPGVTR L+W+R G+ E LD+PG++ +++
Sbjct: 122 RGMICGIPNVGKSTFVNQLAGRAVAKTGDRPGVTRSLQWIRVGRT-ELLDTPGVLAPKLA 180
Query: 279 DQAAAIKLAICDDIGERSYDVADVAA-ILVQMLARIP 314
+ +KLA + E ++ +V A +L + R P
Sbjct: 181 NDEQGLKLAASGAVKEEIFEAYEVCAYVLAYLSGRYP 217
>gi|307705206|ref|ZP_07642076.1| conserved hypothetical protein [Streptococcus mitis SK597]
gi|307621228|gb|EFO00295.1| conserved hypothetical protein [Streptococcus mitis SK597]
Length = 283
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D ++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIAHQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|118443037|ref|YP_878280.1| ribosomal biogenesis GTPase [Clostridium novyi NT]
gi|118133493|gb|ABK60537.1| GTP-binding protein, putative [Clostridium novyi NT]
Length = 280
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LK +DVVIE+RDARI S+ +P +D N+ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTRREIKENLKFVDVVIEIRDARIVKSSANPDIDSICNNKSRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + KV+ N G G + L + + + +SKG++ R
Sbjct: 63 AEEKITRQWIEKLSNDSVKVLSVNCVTGKGLNNIKPTINELLKEKHDRLKSKGMVNITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ K RPGVT+ +W++ +E LD+PG++ + D
Sbjct: 123 AMVVGIPNVGKSSFINKMAKNNTAKVGDRPGVTKNKQWIKTKMGIELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
++ + LA I + D+ +A L+ L
Sbjct: 183 ESVGLDLAFTGAIKDEIMDIETLAFKLIGKL 213
>gi|417983479|ref|ZP_12624116.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei 21/1]
gi|417986759|ref|ZP_12627324.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei 32G]
gi|417992910|ref|ZP_12633262.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei CRF28]
gi|417996266|ref|ZP_12636547.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei M36]
gi|417999094|ref|ZP_12639307.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
T71499]
gi|418002043|ref|ZP_12642170.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
UCD174]
gi|418015272|ref|ZP_12654847.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
Lpc-37]
gi|410524493|gb|EKP99401.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei 32G]
gi|410528226|gb|EKQ03085.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei 21/1]
gi|410532701|gb|EKQ07403.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei CRF28]
gi|410535577|gb|EKQ10194.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei M36]
gi|410540034|gb|EKQ14556.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
T71499]
gi|410545194|gb|EKQ19499.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
UCD174]
gi|410551748|gb|EKQ25791.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
Lpc-37]
Length = 286
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 125/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|289450641|ref|YP_003475452.1| ribosome biogenesis GTP-binding protein YlqF [Clostridiales
genomosp. BVAB3 str. UPII9-5]
gi|289185188|gb|ADC91613.1| ribosome biogenesis GTP-binding protein YlqF [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 280
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 126/214 (58%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V WYPGH+ K +++K +LKL+D+VIE+ DARIP S+ +P +++ L N+ R+LVL+++D+
Sbjct: 4 VNWYPGHMTKAMRDIKAKLKLVDLVIELADARIPASSRNPELNKLLLNKPRLLVLSKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + N G L++ + L +D + KG R VR
Sbjct: 64 ADPTWTERWLNKYQTESLAAAAFNLATIKGMNDLAQKCRELVADKLRRAEDKGRSGRPVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PN GKS+LIN L R+ RPGVTR L+WVR G DLE +D PG++ +I+
Sbjct: 124 AMVLGIPNTGKSTLINSLAGRKAVVTGDRPGVTRALQWVRTG-DLELMDVPGVLWPKITS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
A + LA + ++ +DV D+AA +++ LA +
Sbjct: 183 AHAQLVLAATGAVKDQVFDVEDIAARMIECLAEL 216
>gi|58337275|ref|YP_193860.1| GTP binding protein [Lactobacillus acidophilus NCFM]
gi|227903861|ref|ZP_04021666.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
gi|58254592|gb|AAV42829.1| GTP binding protein [Lactobacillus acidophilus NCFM]
gi|227868252|gb|EEJ75673.1| GTP-binding protein [Lactobacillus acidophilus ATCC 4796]
Length = 284
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +P++++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLNLIDVLVEVLDARIPESSRNPMIEELVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
WA F+ V+ + KL L K ASD K ++G +R
Sbjct: 64 ADPILTKKWAEKFSGPDKYVLALDSLHNTNMQKLISLVKKAASDKTKKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W++ +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTIINRLVGRNVAEVGNKPGVTKGQRWLKTSANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QTVGYKLAAFGAIKDSIFHADDVALYVLERL 214
>gi|406577937|ref|ZP_11053511.1| GTPase YlqF [Streptococcus sp. GMD6S]
gi|406587074|ref|ZP_11061987.1| GTPase YlqF [Streptococcus sp. GMD1S]
gi|419814646|ref|ZP_14339414.1| GTPase YlqF [Streptococcus sp. GMD2S]
gi|419817241|ref|ZP_14341408.1| GTPase YlqF [Streptococcus sp. GMD4S]
gi|404458911|gb|EKA05297.1| GTPase YlqF [Streptococcus sp. GMD6S]
gi|404466256|gb|EKA11605.1| GTPase YlqF [Streptococcus sp. GMD4S]
gi|404471552|gb|EKA16063.1| GTPase YlqF [Streptococcus sp. GMD2S]
gi|404473438|gb|EKA17776.1| GTPase YlqF [Streptococcus sp. GMD1S]
Length = 283
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 EIVALKLALTGAIKDQ 199
>gi|302389635|ref|YP_003825456.1| ribosome biogenesis GTP-binding protein YlqF [Thermosediminibacter
oceani DSM 16646]
gi|302200263|gb|ADL07833.1| ribosome biogenesis GTP-binding protein YlqF [Thermosediminibacter
oceani DSM 16646]
Length = 279
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 122/213 (57%), Gaps = 10/213 (4%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AKT + +K+ L+L+DVV+E+ DAR P ST P + +G++K ++++N+ D+
Sbjct: 3 IHWYPGHMAKTRRIIKENLRLVDVVLEIVDARAPKSTHIPDIHDLIGSKKLLIIMNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++FA G + + + +G KL+ AK L+ G + R +R
Sbjct: 63 ADEKTTERWVSFFADNGMDSLSVDSRRRVGFKKLNEFAKELS----------GKIKRPLR 112
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ R+ +PG+TR W++ G E LD+PGI+ +I +
Sbjct: 113 GIVVGVPNVGKSSFINQIAGRKGAKTGNKPGITRGKMWLKAGDKFELLDTPGILWPKIEE 172
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+A +KLA I E +V +++ L+ L R
Sbjct: 173 EAVGLKLAFLGCIKEELLNVEEISLKLIGFLMR 205
>gi|116617875|ref|YP_818246.1| GTP-binding protein YlqF [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|381336352|ref|YP_005174127.1| GTP-binding protein YlqF [Leuconostoc mesenteroides subsp.
mesenteroides J18]
gi|116096722|gb|ABJ61873.1| Ras superfamily GTP-binding protein YlqF [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|356644318|gb|AET30161.1| GTP-binding protein YlqF [Leuconostoc mesenteroides subsp.
mesenteroides J18]
Length = 284
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ D+RIP S+ +P +D+ +GN+ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDSRIPESSRNPEVDKLIGNKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F QG V+ + + +++ A+ + +KG+ + +R
Sbjct: 65 ADPDQTRAWKKHFEAQGYTVLVLDTRDPRTPQLVTKAARRAVEAKKAAQLAKGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMISGVPNVGKSTLLNHLVMKNVAPTADRPGVTKKIAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KLA+ + + + D A L+
Sbjct: 185 QNIGMKLALTGAVKDTIFAKDDAALFLINFF 215
>gi|419707040|ref|ZP_14234546.1| GTP-binding protein [Streptococcus salivarius PS4]
gi|383283280|gb|EIC81238.1| GTP-binding protein [Streptococcus salivarius PS4]
Length = 284
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKSDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF KQG K + N + ++ AK+L S+ + R +G+ +R
Sbjct: 64 ADNNRTKEWRTYFEKQGIKTLAINSKEQSTVKLVTDAAKSLMSEKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|355677530|ref|ZP_09060433.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium citroniae
WAL-17108]
gi|354813095|gb|EHE97708.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium citroniae
WAL-17108]
Length = 282
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PLS+ +P +D + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARVPLSSRNPDIDSLAAGKARMVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMK-LSRLAKALASDVNVKRRSKGLLPRAV 218
WA +F +G V+ + + GT+K + + + D + R +G+L R +
Sbjct: 63 ADERLNAQWAAWFEAKGIHVVKIDAR-NKGTLKQVQGVVQQACRDKIERDRKRGILNRPI 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R +VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ R
Sbjct: 122 RTMVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGNQWIRLNKTLELLDTPGILWPRFD 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ+ +KLA+ I ++ + ++A +++L
Sbjct: 182 DQSVGLKLALIGSINDQILNKDELAGQCIRIL 213
>gi|418005098|ref|ZP_12645097.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei UW1]
gi|410547876|gb|EKQ22100.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei UW1]
Length = 286
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 126/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +++V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVNLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
QA ++LA I + +
Sbjct: 184 QAIGMRLAFTGAIADAVF 201
>gi|301066444|ref|YP_003788467.1| GTPase [Lactobacillus casei str. Zhang]
gi|300438851|gb|ADK18617.1| Predicted GTPase [Lactobacillus casei str. Zhang]
Length = 286
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 125/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|306829521|ref|ZP_07462711.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
ATCC 6249]
gi|304428607|gb|EFM31697.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
ATCC 6249]
Length = 312
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++++ +G++ ++L+LN+ D+
Sbjct: 33 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLNKIVGDKPKLLILNKADL 92
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 93 ADPVMTKEWRQYFESQGIQTLAINSKEHVTVKVVTDAAKKLMADKIARQKERGIKIETLR 152
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 153 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 212
Query: 280 QAAAIKLAICDDIGER 295
A A+KLA+ I ++
Sbjct: 213 DAVALKLALTGAIKDQ 228
>gi|227535119|ref|ZP_03965168.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187260|gb|EEI67327.1| GTP-binding protein [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 286
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 125/198 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLLAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|403745637|ref|ZP_10954432.1| ribosome biogenesis GTP-binding protein YlqF [Alicyclobacillus
hesperidum URH17-3-68]
gi|403121355|gb|EJY55669.1| ribosome biogenesis GTP-binding protein YlqF [Alicyclobacillus
hesperidum URH17-3-68]
Length = 301
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 1/209 (0%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
PVQWYPGH+AK + ++D+++ +DVVIE+ DAR+PLS+ +P + + R++V+ RED
Sbjct: 2 PVQWYPGHMAKARRIMEDRVRQVDVVIELVDARLPLSSRNPALQDLSSKKPRLVVMTRED 61
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+ +AW FA + N G G ++ + LA+ + KGL V
Sbjct: 62 LADPRATHAWLAAFASDDILAVPVNTTNGNGFSQVRDGLRKLAAAKIQRAMEKGLQRSVV 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +VG PNVGKSS IN+ KR + +PGVTR +WVR G D+E LD+PG++ +I
Sbjct: 122 RAMVVGIPNVGKSSFINQFAKRSVAKTGNKPGVTRTEQWVRMG-DIELLDTPGVLWPKIE 180
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILV 307
++LAI + ++ YD+ + A +
Sbjct: 181 TPEQGLRLAISGAVKDQIYDMEEGLAFFL 209
>gi|422851604|ref|ZP_16898274.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK150]
gi|325694492|gb|EGD36401.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK150]
Length = 283
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|343525032|ref|ZP_08761988.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
gi|343396904|gb|EGV09440.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
constellatus subsp. pharyngis SK1060 = CCUG 46377]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 125/204 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADSDVTKEWRRYFESQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ A+KLA+ I + + +VA
Sbjct: 184 EKVALKLALTGAIKDDLLPMDEVA 207
>gi|422884181|ref|ZP_16930630.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK49]
gi|332360874|gb|EGJ38680.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK49]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|419776422|ref|ZP_14302344.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius SK54]
gi|383845833|gb|EID83233.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius SK54]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 121/197 (61%), Gaps = 4/197 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+P S+ +P++ + +G++ ++LVLN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPFSSQNPMLTKIVGDKPKLLVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADAHLTKEWRRYFENQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKL----AICDDI 292
+ A+KL AI DD+
Sbjct: 184 EKVALKLSLTGAIKDDV 200
>gi|315222957|ref|ZP_07864836.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
anginosus F0211]
gi|315187907|gb|EFU21643.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
anginosus F0211]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G + ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGEKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG K + N + K++ A++L + +++ +G+ +R
Sbjct: 64 ADPTLTKEWRNYFEKQGVKALPINSKEQSTVKKVTEAAQSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EKVALKLALT 193
>gi|417915454|ref|ZP_12559065.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
bv. 2 str. SK95]
gi|342834020|gb|EGU68296.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus mitis
bv. 2 str. SK95]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPSMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|288905301|ref|YP_003430523.1| GTP-binding protein [Streptococcus gallolyticus UCN34]
gi|306831380|ref|ZP_07464539.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325978286|ref|YP_004288002.1| ribosomal biogenesis GTPase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386337746|ref|YP_006033915.1| ribosomal biogenesis GTPase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732027|emb|CBI13592.1| putative conserved GTP-binding protein [Streptococcus gallolyticus
UCN34]
gi|304426440|gb|EFM29553.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325178214|emb|CBZ48258.1| ribosomal biogenesis GTPase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280382|dbj|BAK27956.1| ribosomal biogenesis GTPase [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 284
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF KQG K + N + ++ A++L +D K R +G+ +R
Sbjct: 64 ADSNRTKEWRNYFEKQGIKTLAVNSKEQATVKLVTDAARSLMADKLAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 EVVGLKLALTGAIKDQ 199
>gi|384135042|ref|YP_005517756.1| ribosome biogenesis GTP-binding protein YlqF [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289127|gb|AEJ43237.1| ribosome biogenesis GTP-binding protein YlqF [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 298
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 125/217 (57%), Gaps = 2/217 (0%)
Query: 99 PVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRED 158
P+QW+PGH+AK ++ + ++L+ +DVV+E+ DAR+P+S+ P++D+ ++ R++VL R D
Sbjct: 8 PIQWFPGHMAKAKRLMAEELRGIDVVVELADARLPVSSRSPVLDELARHKPRLVVLTRID 67
Query: 159 MISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
+ + W F ++G I N + G G + R + D + R++G+
Sbjct: 68 LADPRCTDRWVERFHREGVIAIPVNARSGQGLREFRRALDEVVEDKMDRARARGIERAVT 127
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R I G PNVGKS+ +N+L R + RPGVTR L+W+R G E LD+PG++ +++
Sbjct: 128 RGMICGIPNVGKSTFVNQLAGRAVAKTGDRPGVTRALQWIRVGH-TELLDTPGVLAPKLA 186
Query: 279 DQAAAIKLAICDDIGERSYDVADVAA-ILVQMLARIP 314
+ +KLA I E ++ +V A +L + R P
Sbjct: 187 NDEQGLKLAASGAIKEEIFEAYEVCAYVLAYLSGRYP 223
>gi|422860127|ref|ZP_16906771.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK330]
gi|327470025|gb|EGF15489.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK330]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|422854280|ref|ZP_16900944.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK160]
gi|325696516|gb|EGD38406.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK160]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|332638612|ref|ZP_08417475.1| GTP-binding protein YlqF [Weissella cibaria KACC 11862]
Length = 290
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LK +D+V E+ DARIP+S+ +P +D+ LGN+ R+LV+ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKYVDIVFELVDARIPVSSRNPELDEVLGNKPRLLVMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YF QG +V+ + + +++ A+ + +D KG+ + +R
Sbjct: 65 ADPERTKAWTKYFVDQGLEVVALDTRGHKTPQIMTKAARKVLADKWAALEEKGVKDKPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVTKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q LA+ I ++ + D+A ++ +
Sbjct: 185 QRVGEHLAMTGAIKDQLINQDDIALATLKFM 215
>gi|323351560|ref|ZP_08087214.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis VMC66]
gi|322122046|gb|EFX93772.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis VMC66]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|392428770|ref|YP_006469781.1| GTP-binding protein [Streptococcus intermedius JTH08]
gi|391757916|dbj|BAM23533.1| GTP-binding protein [Streptococcus intermedius JTH08]
Length = 295
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 121/197 (61%), Gaps = 4/197 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+P S+ +P++ + +G++ ++LVLN+ D+
Sbjct: 16 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPFSSQNPMLTKIVGDKPKLLVLNKADL 75
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 76 ADAHLTKEWRRYFENQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 135
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 136 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 195
Query: 280 QAAAIKL----AICDDI 292
+ A+KL AI DD+
Sbjct: 196 EKVALKLSLTGAIKDDV 212
>gi|330719082|ref|ZP_08313682.1| GTP-binding protein YlqF [Leuconostoc fallax KCTC 3537]
Length = 283
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 123/210 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+D+V E+ DARIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDIVFELVDARIPESSRNPEVDKLIGKKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F QG V+ + + +++ A+ + KG++ + +R
Sbjct: 65 ADPEQTRLWKKHFEMQGYTVLVLDTRDPKTPQLVTKAAREALKAKKTAQLEKGIVDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+K+ + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 ALIAGIPNVGKSTLLNHLIKKNVAPTADRPGVTKKIAWLKTSTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQM 309
QA ++L++ + + D A L++
Sbjct: 185 QAIGLRLSLTGAVKSTIFAKDDAALFLLKF 214
>gi|423068503|ref|ZP_17057291.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius F0395]
gi|355366758|gb|EHG14475.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius F0395]
Length = 283
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADSDVTKEWRRYFESQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EKVALKLALT 193
>gi|366085997|ref|ZP_09452482.1| GTP-binding protein [Lactobacillus zeae KCTC 3804]
Length = 286
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 131/217 (60%), Gaps = 3/217 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+++EV DAR P S+ +P++D+ +G + R+++LN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLILEVVDARTPESSRNPMLDEIIGEKPRMMILNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W Y+ QG I ++ Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTREWVQYYQDQGFAAIATDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+ R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVHRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAI--LVQMLARIP 314
Q ++LA I + + DV + L +A P
Sbjct: 184 QTIGMRLAFTGAIADAVFQ-EDVVGLYGLTYFMAHYP 219
>gi|418166654|ref|ZP_12803310.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17971]
gi|353830250|gb|EHE10380.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA17971]
Length = 283
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKNLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|422846663|ref|ZP_16893346.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK72]
gi|325687471|gb|EGD29492.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK72]
Length = 283
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQNYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|291535187|emb|CBL08299.1| ribosome biogenesis GTP-binding protein YlqF [Roseburia
intestinalis M50/1]
Length = 287
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPL++ +P +D+ N+ R++++N+ D+
Sbjct: 4 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLASRNPDIDELGKNKARLILMNKSDLS 63
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W+ +F ++G V+ + + G ++ + + + R +G+ R VRA
Sbjct: 64 DTGRNREWSDFFREKGYYVVCLDARSKAGMKDVTNVVMEACKEKIERDRKRGIKNRPVRA 123
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 124 MVVGIPNVGKSTFINSYAGKACAKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 183
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQ-MLARIPTV 316
+ LA+ I + ++ +++ L++ +L+ PTV
Sbjct: 184 RVGLYLALIGAIKDEILNIDELSLELIKILLSDYPTV 220
>gi|307709298|ref|ZP_07645756.1| conserved hypothetical protein [Streptococcus mitis SK564]
gi|307619881|gb|EFN98999.1| conserved hypothetical protein [Streptococcus mitis SK564]
Length = 283
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG + + N + + ++ AK L ++ +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMANKIARQKERGIKIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|291546335|emb|CBL19443.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus sp.
SR1/5]
Length = 285
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQWYPGH+ K ++++++ +KL+D++IE+ DAR+PLS+ +P +D+ N+ R+++LN+ D+
Sbjct: 3 VQWYPGHMTKAKRQMQEDIKLIDLIIELVDARVPLSSRNPDIDELGKNKARMILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKR-RSKGLLPRAV 218
AW YF ++G + + + G+MK A A +R R +G+ R V
Sbjct: 63 ADERQNRAWMEYFKEKGIYAVSIDSR-NKGSMKAVSAAITEACKEKTERDRRRGIKNRPV 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA + G PNVGKS+ IN + +PGVT+ +W+R K +E LD+PGI+ +
Sbjct: 122 RAMVAGIPNVGKSTFINTFAGKACAKTGNKPGVTKGKQWIRLNKSVELLDTPGILWPKFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ ++LA I + ++ ++A L+ L
Sbjct: 182 DQEVGMRLAYIGSIKDDILNIEELALGLIGYL 213
>gi|421236265|ref|ZP_15692864.1| hypothetical protein AMCSP07_001071 [Streptococcus pneumoniae
2071004]
gi|395603232|gb|EJG63372.1| hypothetical protein AMCSP07_001071 [Streptococcus pneumoniae
2071004]
Length = 283
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF Q + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWCQYFESQEIQTLAVNSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|422870916|ref|ZP_16917409.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1087]
gi|328946297|gb|EGG40441.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1087]
Length = 283
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EMVALKLALT 193
>gi|422865484|ref|ZP_16912109.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1058]
gi|327489684|gb|EGF21475.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1058]
Length = 283
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQNYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|421490766|ref|ZP_15938133.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
anginosus SK1138]
gi|400371763|gb|EJP24712.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
anginosus SK1138]
Length = 283
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 120/190 (63%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF K+G K + N + K + A++L + +++ +G+ +R
Sbjct: 64 ADPALTKEWRNYFEKKGVKTLPINSKEQSTVKKFTEAAQSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ +DLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNRDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EKVALKLALT 193
>gi|251782422|ref|YP_002996724.1| ribosomal biogenesis GTPase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242391051|dbj|BAH81510.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
Length = 282
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNVGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|381210003|ref|ZP_09917074.1| hypothetical protein LGrbi_08796 [Lentibacillus sp. Grbi]
Length = 284
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 124/214 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++E++++LKL D VIE+ DAR PLS+ +P++ L + +++V+ ++D+
Sbjct: 3 IQWFPGHMAKAKREVEEKLKLTDFVIELVDARTPLSSQNPMLQNVLQQKLKMIVMMKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +Y+ +G I + + + AK L K + KG+ PR R
Sbjct: 63 ADNRMTEKWLSYYKGRGIPAIAIDVNSKSDIKCVVQTAKDLGQTKMDKLKRKGVNPRPAR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LINRL +++ +PGVT+ +W++ D E LD+PGI+ + D
Sbjct: 123 AMIIGIPNVGKSTLINRLANKKIAQIGDKPGVTKKQQWIKVKGDFELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ +LA I ++ + DV A ++Q + +
Sbjct: 183 ERVGYRLAAVGTIKDQLLPLDDVVAFVIQYMQKF 216
>gi|341820879|emb|CCC57194.1| GTP-binding protein [Weissella thailandensis fsh4-2]
Length = 290
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 127/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LK +D+V E+ DARIPLS+ +P +D+ LG + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKHVDIVFELVDARIPLSSRNPELDEVLGEKPRLLIMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG V+ + + +++ A+++ +D KG+ +A+R
Sbjct: 65 ADPERTSIWREYFESQGLTVVSLDTRGNKTPQMITKAARSVLADKWRNLEEKGVQDKAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + +D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVMKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFTD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q LA+ I ++ ++ D+A ++
Sbjct: 185 QRVGQHLAMTGAIKDQLINLDDIALTTLKFF 215
>gi|422823564|ref|ZP_16871752.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK405]
gi|324992891|gb|EGC24811.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK405]
Length = 283
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLERQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|363892710|ref|ZP_09319870.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium CM2]
gi|361963144|gb|EHL16230.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium CM2]
Length = 285
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT +E+ +KL+++V+E+ DAR P+S+ +P +D + + +++VL ++D+
Sbjct: 7 INWYPGHMKKTREEIIKNIKLVNLVVEIVDARAPISSKNPDIDSMINGKSKLVVLTKKDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
D + +Y+ ++G K + N G L + + + + K ++KG++ + +R
Sbjct: 67 ADEEDMGKFISYYKEKGIKSVAINSTKKTGISPLINILEQIKEENYQKNKAKGIIKKPLR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN+++ ++ PG+T+ +W++ D+E LD+PGI+ +I D
Sbjct: 127 IMIVGIPNVGKSTLINQIIGKKSAKTGNTPGITKSQQWLKIKGDIELLDTPGILWPKIED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A KLA I ++ ++ D+ ++ L
Sbjct: 187 KITAQKLAFLGSIRDQVIEIEDIYYEFIKFL 217
>gi|291542666|emb|CBL15776.1| Ras superfamily GTP-binding protein YlqF [Ruminococcus bromii
L2-63]
Length = 290
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 124/218 (56%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
++ +QW+PGH+ KT+++++ LKL+D V E+ DARIP+S+ +P + + + N+ R+++LN
Sbjct: 3 EMQTIQWFPGHMTKTKRQIQSSLKLVDAVAEIIDARIPVSSRNPDLAKLVQNKPRVILLN 62
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ DM + W YF KQ I + + G G K + + S + + KG++
Sbjct: 63 KCDMANQTATKMWIDYFKKQNLVAIPVDCKSGRGLDKFAPAVNTVMSHKIARLKEKGMVN 122
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R IVG PNVGKSS IN+++K+ RPGVTR +W K+LE LD+PG++
Sbjct: 123 PTIRIMIVGIPNVGKSSFINKMVKKNRAKVEDRPGVTRGNQWYTIAKNLEMLDTPGVLWP 182
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ D+ LA + ++ D+ +A L+ + +
Sbjct: 183 KFDDKTVGEHLAFTGAVKDQILDIELLAVRLLDFIKEL 220
>gi|170755310|ref|YP_001781985.1| ribosomal biogenesis GTPase [Clostridium botulinum B1 str. Okra]
gi|429243865|ref|ZP_19207349.1| GTPase YlqF [Clostridium botulinum CFSAN001628]
gi|169120522|gb|ACA44358.1| GTP-binding protein [Clostridium botulinum B1 str. Okra]
gi|428759071|gb|EKX81460.1| GTPase YlqF [Clostridium botulinum CFSAN001628]
Length = 292
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVTR +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTRSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|418189390|ref|ZP_12825905.1| hypothetical protein SPAR94_1149 [Streptococcus pneumoniae GA47373]
gi|419495334|ref|ZP_14035052.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47461]
gi|421303334|ref|ZP_15753998.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17484]
gi|353856532|gb|EHE36501.1| hypothetical protein SPAR94_1149 [Streptococcus pneumoniae GA47373]
gi|379595416|gb|EHZ60224.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47461]
gi|395901956|gb|EJH12892.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17484]
Length = 283
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF Q + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWCQYFESQEIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|422826354|ref|ZP_16874533.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK678]
gi|324994472|gb|EGC26385.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK678]
Length = 283
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQNYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|422821227|ref|ZP_16869420.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK353]
gi|324991141|gb|EGC23075.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK353]
Length = 283
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQNYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|389856593|ref|YP_006358836.1| GTP1/OBG protein [Streptococcus suis ST1]
gi|353740311|gb|AER21318.1| GTP1/OBG protein [Streptococcus suis ST1]
Length = 283
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK+L D + R +G+ +R
Sbjct: 64 ADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTEAAKSLMKDKIERLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|322373052|ref|ZP_08047588.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
C150]
gi|421452532|ref|ZP_15901893.1| GTP-binding protein [Streptococcus salivarius K12]
gi|321278094|gb|EFX55163.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
C150]
gi|400182963|gb|EJO17225.1| GTP-binding protein [Streptococcus salivarius K12]
Length = 284
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF QG K + N + ++ AK+L +D + R +G+ +R
Sbjct: 64 ADSNRTKEWRTYFKSQGIKTLAINSKEQSTVKLVTDAAKSLMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|312866577|ref|ZP_07726792.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis F0405]
gi|311097876|gb|EFQ56105.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parasanguinis F0405]
Length = 283
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L +D +++ +G+ +R
Sbjct: 64 ADPVATKEWQDYFEAQGIKTLAINSKEQSTVKKVTDAAKSLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKYLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 EEVALKLALTGAIKDQ 199
>gi|342163784|ref|YP_004768423.1| GTPase YlqF [Streptococcus pseudopneumoniae IS7493]
gi|341933666|gb|AEL10563.1| GTPase YlqF [Streptococcus pseudopneumoniae IS7493]
Length = 283
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVMTKEWRQYFESQGIQTLTINSKEQVTVKVVTDAAKKLMADKIARQKGRGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PG+T+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGITKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|257414218|ref|ZP_04745629.2| ribosome biogenesis GTP-binding protein YlqF [Roseburia
intestinalis L1-82]
gi|257200806|gb|EEU99090.1| ribosome biogenesis GTP-binding protein YlqF [Roseburia
intestinalis L1-82]
Length = 291
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 130/217 (59%), Gaps = 1/217 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+ K ++++++ +KL+D+VIE+ DARIPL++ +P +D+ N+ R++++N+ D+
Sbjct: 8 QWYPGHMTKAKRQMQEDIKLIDLVIELVDARIPLASRNPDIDELGKNKARLILMNKSDLS 67
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W+ +F ++G V+ + + G ++ + + + R +G+ R VRA
Sbjct: 68 DAGRNREWSDFFREKGYYVVCLDARSKAGMKDVTNVVMEACKEKIERDRKRGIKNRPVRA 127
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
+VG PNVGKS+ IN + +PGVT+ +W+R K++E LD+PGI+ + DQ
Sbjct: 128 MVVGIPNVGKSTFINSYAGKACVKTGNKPGVTKGKQWIRLNKNVELLDTPGILWPKFEDQ 187
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQ-MLARIPTV 316
+ LA+ I + ++ +++ L++ +L+ PTV
Sbjct: 188 RVGLYLALIGAIKDEILNIDELSLELIKILLSDYPTV 224
>gi|320546753|ref|ZP_08041064.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus equinus
ATCC 9812]
gi|320448632|gb|EFW89364.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus equinus
ATCC 9812]
Length = 284
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + ++ AK+L +D K R +G+ +R
Sbjct: 64 ADSNRTKEWHKYFESQGIKTLAVNSKEQSTVKLVTEAAKSLMADKLAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 EVVGLKLALTGAIKDQ 199
>gi|225019935|ref|ZP_03709127.1| hypothetical protein CLOSTMETH_03889 [Clostridium methylpentosum
DSM 5476]
gi|224947299|gb|EEG28508.1| hypothetical protein CLOSTMETH_03889 [Clostridium methylpentosum
DSM 5476]
Length = 356
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 122/212 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KTE+ ++ L L+DVV+E+ DARIP S+ +P++D+ + + RI++LN+ D+
Sbjct: 68 IQWFPGHMKKTERMIEKNLPLVDVVVEIIDARIPASSRNPVLDKLIQGKPRIVLLNKCDV 127
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF G + + Q G ++ L + + ++ KR SKG+ R VR
Sbjct: 128 ADLNFTRRWVEYFQSVGIAALAIDCQTGKNLKQVQPLIRQVLVELIQKRASKGMSGRIVR 187
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ + RPGVTR +WV D++ LD PG++ + D
Sbjct: 188 AMVVGIPNVGKSTFINKMAGGKRAKVEDRPGVTRGKQWVHIDNDIDLLDMPGVLCPKFED 247
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ LA + + DV +A L++ L+
Sbjct: 248 PQVGVHLAWTGAVKDDVVDVELLAMNLLEYLS 279
>gi|422855507|ref|ZP_16902165.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1]
gi|327462196|gb|EGF08523.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1]
Length = 283
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 119/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWRSYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EIVALKLALT 193
>gi|149013110|ref|ZP_01833956.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|418146365|ref|ZP_12783145.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13637]
gi|419534624|ref|ZP_14074125.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17457]
gi|421217718|ref|ZP_15674618.1| hypothetical protein AMCSP13_001363 [Streptococcus pneumoniae
2070335]
gi|147763055|gb|EDK69998.1| GTP-binding protein [Streptococcus pneumoniae SP19-BS75]
gi|353813573|gb|EHD93801.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13637]
gi|379563972|gb|EHZ28969.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA17457]
gi|395584152|gb|EJG44564.1| hypothetical protein AMCSP13_001363 [Streptococcus pneumoniae
2070335]
Length = 283
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF Q + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQEIQTLAINSKEQVTVKVVTDAAKKLMTDKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|365924909|ref|ZP_09447672.1| GTP-binding protein, GTPase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420266411|ref|ZP_14768882.1| GTP-binding protein, GTPase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394425487|gb|EJE98450.1| GTP-binding protein, GTPase [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 286
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+ +K +D+V+E+ DAR+P S+ +P + Q L N+ ILVL ++D+
Sbjct: 4 IQWFPGHMAKALRQVKENIKQVDIVLELVDARLPESSRNPQLAQILQNKPSILVLTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ Q I N G + ++ + LA + ++ + KG+L + ++
Sbjct: 64 ADSQTTAGWVRYYESQKQPAIAVNSTTGSLKIIEEKIKQVLADKIALQAQ-KGILHKRIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+G PNVGKS+L+N L+K+ + RPGVT+ +W++ GKD+ LD+PGI+ + D
Sbjct: 123 VMCIGIPNVGKSTLLNHLVKKNVAQVGNRPGVTKSQQWLKAGKDMLLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
KLA+ I E Y D+A L++ +
Sbjct: 183 PMIGKKLALTGAIKETLYAKDDIALYLLEHFCQF 216
>gi|329117496|ref|ZP_08246213.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parauberis NCFD 2020]
gi|326907901|gb|EGE54815.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
parauberis NCFD 2020]
Length = 284
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W ++ KQG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADKSMTKEWRQFYEKQGIKTLAINSKEQSTVKKVTEAAKDLMADKIQRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QKVGLKLALTGAIKDQ 199
>gi|306820819|ref|ZP_07454443.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|402310424|ref|ZP_10829390.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium sp. AS15]
gi|304551137|gb|EFM39104.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|400368876|gb|EJP21883.1| ribosome biogenesis GTP-binding protein YlqF [Eubacterium sp. AS15]
Length = 286
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 121/213 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT + + LKL+D+VIE+ DAR P+ST +P +D + N+K+I+V ++D+
Sbjct: 9 INWYPGHMKKTREGIVKNLKLVDLVIEILDARAPISTKNPDIDNMISNKKKIIVFTKKDL 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ Y+ VI N GT L +L + + K ++KG++ + +R
Sbjct: 69 TPEDSLKKFIDYYKNNNDYVIAINATDKAGTSSLIKLLDNIREENYNKNKNKGIINKNLR 128
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN+++ ++ PG+T+ +W++ ++E LD+PGI+ +I D
Sbjct: 129 IMIVGIPNVGKSTLINQIIGKKSAKTGDTPGITKAQQWLKIKGNIELLDTPGILWPKIED 188
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ KL+ I + ++ D+ +Q L +
Sbjct: 189 VSVGNKLSFLGSIKDSVLEIEDIYYEFIQYLLK 221
>gi|392331467|ref|ZP_10276082.1| ribosomal biogenesis GTPase [Streptococcus canis FSL Z3-227]
gi|391419146|gb|EIQ81958.1| ribosomal biogenesis GTPase [Streptococcus canis FSL Z3-227]
Length = 282
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 124/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADAARTKEWKAYYESQGIKTLAINSKEQPTVKKVTEAAKELMADKIQRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ +KLA+ I ++ + +V
Sbjct: 184 ELVGLKLALTGAIKDQVLPMDEVT 207
>gi|148985763|ref|ZP_01818891.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP3-BS71]
gi|148989185|ref|ZP_01820575.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP6-BS73]
gi|149004284|ref|ZP_01829061.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP14-BS69]
gi|237650102|ref|ZP_04524354.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae CCRI 1974]
gi|237822304|ref|ZP_04598149.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae CCRI 1974M2]
gi|387757506|ref|YP_006064485.1| putative GTPase protein [Streptococcus pneumoniae OXC141]
gi|405761239|ref|YP_006701835.1| GTPase protein [Streptococcus pneumoniae SPNA45]
gi|418086863|ref|ZP_12724033.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47033]
gi|418143995|ref|ZP_12780795.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13494]
gi|418202401|ref|ZP_12838831.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA52306]
gi|418232200|ref|ZP_12858787.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA07228]
gi|418236660|ref|ZP_12863228.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA19690]
gi|419455545|ref|ZP_13995503.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP04]
gi|419457544|ref|ZP_13997488.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02254]
gi|419480049|ref|ZP_14019855.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA19101]
gi|419499742|ref|ZP_14039437.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47597]
gi|421285252|ref|ZP_15736029.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA60190]
gi|421289760|ref|ZP_15740511.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA54354]
gi|421305079|ref|ZP_15755735.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA62331]
gi|421307476|ref|ZP_15758119.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA60132]
gi|147757778|gb|EDK64792.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP14-BS69]
gi|147922067|gb|EDK73190.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP3-BS71]
gi|147925408|gb|EDK76486.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae SP6-BS73]
gi|301800095|emb|CBW32696.1| putative GTPase protein [Streptococcus pneumoniae OXC141]
gi|353759124|gb|EHD39710.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47033]
gi|353809736|gb|EHD89996.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13494]
gi|353868204|gb|EHE48094.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA52306]
gi|353886927|gb|EHE66707.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA07228]
gi|353892892|gb|EHE72640.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA19690]
gi|379531417|gb|EHY96651.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA02254]
gi|379570620|gb|EHZ35581.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA19101]
gi|379600768|gb|EHZ65548.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA47597]
gi|379628679|gb|EHZ93281.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae EU-NP04]
gi|395887231|gb|EJG98246.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA60190]
gi|395889001|gb|EJH00012.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA54354]
gi|395905741|gb|EJH16646.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA62331]
gi|395907389|gb|EJH18280.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA60132]
gi|404278128|emb|CCM08711.1| putative GTPase protein [Streptococcus pneumoniae SPNA45]
gi|429316132|emb|CCP35797.1| putative GTPase protein [Streptococcus pneumoniae SPN034156]
gi|429319474|emb|CCP32750.1| putative GTPase protein [Streptococcus pneumoniae SPN034183]
gi|429321291|emb|CCP34724.1| putative GTPase protein [Streptococcus pneumoniae SPN994039]
gi|429323111|emb|CCP30765.1| putative GTPase protein [Streptococcus pneumoniae SPN994038]
Length = 283
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF Q + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQEIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|168188038|ref|ZP_02622673.1| GTP-binding protein [Clostridium botulinum C str. Eklund]
gi|169294120|gb|EDS76253.1| GTP-binding protein [Clostridium botulinum C str. Eklund]
Length = 280
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LK +DVVIE+RDARI S+ +P +D N+ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTRREIKENLKFVDVVIEIRDARIVKSSANPDIDSICNNKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + KV+ N G G + L + + + ++KGL+ R
Sbjct: 63 SEEKITRKWIDKLSNDSVKVLSVNCVTGKGLNNIKPTINELLKEKHDRLKAKGLVNITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ K RPGVT+ +W++ +E LD+PG++ + D
Sbjct: 123 AMVVGIPNVGKSSFINKMAKNNTAKVGDRPGVTKNKQWIKTKMGIELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
++ + LA I + D+ +A L+ L
Sbjct: 183 ESVGLDLAFTGAIKDEIMDIETLAFKLIGKL 213
>gi|333905011|ref|YP_004478882.1| GTPase protein [Streptococcus parauberis KCTC 11537]
gi|333120276|gb|AEF25210.1| GTPase protein [Streptococcus parauberis KCTC 11537]
gi|456370989|gb|EMF49885.1| 50S ribosomal subunit maturation GTPase [Streptococcus parauberis
KRS-02109]
gi|457095374|gb|EMG25869.1| 50S ribosomal subunit maturation GTPase [Streptococcus parauberis
KRS-02083]
Length = 284
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W ++ KQG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADKSMTKEWRQFYEKQGIKTLAINSKEQSTVKKVTEAAKDLMADKIQRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QKVGLKLALTGAIKDQ 199
>gi|422876383|ref|ZP_16922853.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1056]
gi|332361191|gb|EGJ38995.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1056]
Length = 283
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQRYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|168486443|ref|ZP_02710951.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|182684111|ref|YP_001835858.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae CGSP14]
gi|303255771|ref|ZP_07341813.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae BS455]
gi|303260562|ref|ZP_07346528.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|303262696|ref|ZP_07348635.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|303265231|ref|ZP_07351142.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|303266994|ref|ZP_07352868.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|303269264|ref|ZP_07355039.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|387759386|ref|YP_006066364.1| putative GTPase protein [Streptococcus pneumoniae INV200]
gi|418139432|ref|ZP_12776261.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13338]
gi|418180549|ref|ZP_12817119.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41688]
gi|418184953|ref|ZP_12821497.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47283]
gi|418200011|ref|ZP_12836456.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47976]
gi|419509742|ref|ZP_14049386.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae NP141]
gi|419514741|ref|ZP_14054366.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae England14-9]
gi|419523400|ref|ZP_14062979.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13723]
gi|419530405|ref|ZP_14069933.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40028]
gi|421213212|ref|ZP_15670171.1| hypothetical protein AMCSP12_001096 [Streptococcus pneumoniae
2070108]
gi|421215342|ref|ZP_15672268.1| hypothetical protein AMCSP04_001060 [Streptococcus pneumoniae
2070109]
gi|421268450|ref|ZP_15719320.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR95]
gi|421295838|ref|ZP_15746550.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA58581]
gi|182629445|gb|ACB90393.1| GTP-binding protein [Streptococcus pneumoniae CGSP14]
gi|183570532|gb|EDT91060.1| GTP-binding protein [Streptococcus pneumoniae CDC1087-00]
gi|301801975|emb|CBW34703.1| putative GTPase protein [Streptococcus pneumoniae INV200]
gi|302597283|gb|EFL64387.1| ribosomal biogenesis GTPase [Streptococcus pneumoniae BS455]
gi|302636128|gb|EFL66624.1| GTP-binding protein [Streptococcus pneumoniae SP14-BS292]
gi|302638275|gb|EFL68744.1| GTP-binding protein [Streptococcus pneumoniae SP-BS293]
gi|302641221|gb|EFL71593.1| GTP-binding protein [Streptococcus pneumoniae BS458]
gi|302643474|gb|EFL73747.1| GTP-binding protein [Streptococcus pneumoniae BS457]
gi|302645202|gb|EFL75438.1| GTP-binding protein [Streptococcus pneumoniae BS397]
gi|353845251|gb|EHE25293.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA41688]
gi|353849272|gb|EHE29278.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47283]
gi|353865058|gb|EHE44967.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA47976]
gi|353905469|gb|EHE80897.1| ribosome biogenesis GTPase A [Streptococcus pneumoniae GA13338]
gi|379557683|gb|EHZ22724.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA13723]
gi|379573757|gb|EHZ38707.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA40028]
gi|379632935|gb|EHZ97504.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae NP141]
gi|379635290|gb|EHZ99848.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae England14-9]
gi|395580214|gb|EJG40705.1| hypothetical protein AMCSP12_001096 [Streptococcus pneumoniae
2070108]
gi|395580727|gb|EJG41205.1| hypothetical protein AMCSP04_001060 [Streptococcus pneumoniae
2070109]
gi|395869945|gb|EJG81059.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae SPAR95]
gi|395897051|gb|EJH08015.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pneumoniae GA58581]
Length = 283
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 122/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF Q + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPAMTKEWRQYFESQEIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|160933522|ref|ZP_02080910.1| hypothetical protein CLOLEP_02368 [Clostridium leptum DSM 753]
gi|156867399|gb|EDO60771.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium leptum
DSM 753]
Length = 289
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KT ++++ LKL+D V E+ DARIP+S+ +P + + + N+ RI+++N+ DM
Sbjct: 7 IQWFPGHMTKTRRKIQASLKLVDAVAEIIDARIPVSSRNPELHKIIENKPRIILMNKCDM 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W + + K+G I + + G G + + L D ++ KG++ R +R
Sbjct: 67 ADPSQTARWVSCYQKEGVLAIPVDCKSGRGLNQFIPKVRELLKDRIIQWEQKGMVNRTIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSS INR+ K+ RPGVTR +W GK + LD+PG++ + D
Sbjct: 127 VMIVGIPNVGKSSFINRMAKQNRAKVEDRPGVTRGNQWFTIGKAFDLLDTPGVLWPKFDD 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA + ++ D +A+ L+++L
Sbjct: 187 PNVGEKLAFTGAVKDQIVDTEQLASRLLEVL 217
>gi|226949795|ref|YP_002804886.1| ribosomal biogenesis GTPase [Clostridium botulinum A2 str. Kyoto]
gi|226844044|gb|ACO86710.1| GTP-binding protein [Clostridium botulinum A2 str. Kyoto]
Length = 292
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKSTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|418017710|ref|ZP_12657266.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
salivarius M18]
gi|345526559|gb|EGX29870.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
salivarius M18]
Length = 284
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + ++ AK+L +D + R +G+ +R
Sbjct: 64 ADSNRTKEWRSYFENQGIKTLAINSKEQSTVKLVTDAAKSLMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWSKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|223933032|ref|ZP_03625026.1| GTP1/OBG protein [Streptococcus suis 89/1591]
gi|302023801|ref|ZP_07249012.1| ribosomal biogenesis GTPase [Streptococcus suis 05HAS68]
gi|330832828|ref|YP_004401653.1| GTP1/OBG protein [Streptococcus suis ST3]
gi|223898349|gb|EEF64716.1| GTP1/OBG protein [Streptococcus suis 89/1591]
gi|329307051|gb|AEB81467.1| GTP1/OBG protein [Streptococcus suis ST3]
Length = 283
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK+L D + R +G+ +R
Sbjct: 64 ADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAKSLMKDKIERLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|386086556|ref|YP_006002430.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
thermophilus ND03]
gi|387909787|ref|YP_006340093.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
thermophilus MN-ZLW-002]
gi|312278269|gb|ADQ62926.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
thermophilus ND03]
gi|387574722|gb|AFJ83428.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus
thermophilus MN-ZLW-002]
Length = 284
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ +IL+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKILILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF QG K + N + ++ AK+L ++ + R +G+ +R
Sbjct: 64 ADDNRTKEWRTYFESQGIKTLAINSKEQSTVKLITDAAKSLMTEKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|386584145|ref|YP_006080548.1| GTP1/OBG protein [Streptococcus suis D9]
gi|353736291|gb|AER17300.1| GTP1/OBG protein [Streptococcus suis D9]
Length = 283
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK+L D + R +G+ +R
Sbjct: 64 ADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAKSLMKDKIERLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|385825991|ref|YP_005862333.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|329667435|gb|AEB93383.1| hypothetical protein LJP_1058c [Lactobacillus johnsonii DPC 6026]
Length = 279
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 115/213 (53%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +L+D L L+DV+IEV DAR+P+S+ +P++ Q + I+VLN+ D+
Sbjct: 4 IQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ G VI + Q L ++ K K +KG +R
Sbjct: 64 ADPIQTKKWIRYYQDDGNFVISMDAQHTTNMTSLFKIIKLAGKKKTDKLIAKGASNPMIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS++INR++ R +PGVTR W++ +++ LD+PGI+ + SD
Sbjct: 124 VAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA C I + DVA +++ L +
Sbjct: 184 QEVGYKLAACGAIKADIFHPDDVALFVIEFLKQ 216
>gi|167756890|ref|ZP_02429017.1| hypothetical protein CLORAM_02439 [Clostridium ramosum DSM 1402]
gi|237734600|ref|ZP_04565081.1| ribosomal biogenesis GTPase [Mollicutes bacterium D7]
gi|365832610|ref|ZP_09374141.1| ribosome biogenesis GTP-binding protein YlqF [Coprobacillus sp.
3_3_56FAA]
gi|374625647|ref|ZP_09698063.1| ribosome biogenesis GTP-binding protein YlqF [Coprobacillus sp.
8_2_54BFAA]
gi|167703065|gb|EDS17644.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium ramosum
DSM 1402]
gi|229382420|gb|EEO32511.1| ribosomal biogenesis GTPase [Coprobacillus sp. D7]
gi|365260189|gb|EHM90154.1| ribosome biogenesis GTP-binding protein YlqF [Coprobacillus sp.
3_3_56FAA]
gi|373915307|gb|EHQ47078.1| ribosome biogenesis GTP-binding protein YlqF [Coprobacillus sp.
8_2_54BFAA]
Length = 288
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 3/219 (1%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
++ +QW+PGH+AK +E+ +++KL+D+VIE+ DAR PLS+ +P+ ++ N+ R++V+ +
Sbjct: 2 VKQIQWFPGHMAKARREISEKMKLIDIVIELVDARAPLSSKNPMFNEICNNKPRLIVMTK 61
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+D+ + W YF +G I N + + + K + + + +GL PR
Sbjct: 62 KDLADSKATSKWIEYFKGKGIYAICVNLKNFNEYQLVIDVCKEILKEKMEREAKRGLKPR 121
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
A+RA ++G PNVGKS+ INRL KR+ RPGVT+ + +R KD E D+PG++ +
Sbjct: 122 AMRAMVLGIPNVGKSTFINRLAKRKATVTGNRPGVTKAQQIIRVDKDFELFDTPGVLWPK 181
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
D A +A+ IG D+ + + + + + T
Sbjct: 182 FDDLNVARNIAL---IGSIKQDILPLDELFIYAVNYLET 217
>gi|222153078|ref|YP_002562255.1| ribosomal biogenesis GTPase [Streptococcus uberis 0140J]
gi|222113891|emb|CAR42061.1| putative GTPase protein [Streptococcus uberis 0140J]
Length = 284
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 123/196 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G + ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGEKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ +QG K + N + K++ AK L ++ K + +G+ +++R
Sbjct: 64 ADQSLTKEWCRYYEEQGIKTLAINSKEQATVKKVTEAAKKLMAEKLQKLKERGIQKQSLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 EEVGLKLALTGAIKDQ 199
>gi|422878828|ref|ZP_16925294.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1059]
gi|422928676|ref|ZP_16961618.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis ATCC 29667]
gi|422931651|ref|ZP_16964582.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK340]
gi|332366881|gb|EGJ44622.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK1059]
gi|339616318|gb|EGQ20970.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis ATCC 29667]
gi|339619951|gb|EGQ24526.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK340]
Length = 283
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQRYFESQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EIVALKLALT 193
>gi|171779428|ref|ZP_02920392.1| hypothetical protein STRINF_01273 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282045|gb|EDT47476.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantarius subsp. infantarius ATCC BAA-102]
Length = 309
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 122/201 (60%)
Query: 95 KSLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVL 154
K + +QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++L
Sbjct: 24 KLMATIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMIL 83
Query: 155 NREDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
N+ D+ W YF QG K + N + ++ AK+L +D K R +G+
Sbjct: 84 NKADLADSNRTKEWRRYFESQGIKTLAVNSKEQATVKLVTEAAKSLMADKLAKLRERGIQ 143
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+
Sbjct: 144 KETLRTMIIGIPNAGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKDLEILDTPGILW 203
Query: 275 MRISDQAAAIKLAICDDIGER 295
+ D+ +KLA+ I ++
Sbjct: 204 PKFEDEVVGLKLALTGAIKDQ 224
>gi|379705261|ref|YP_005203720.1| ribosomal biogenesis GTPase [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374681960|gb|AEZ62249.1| ribosomal biogenesis GTPase [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 284
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIIGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + ++ AK+L +D K R +G+ +R
Sbjct: 64 ADSNRTKEWRRYFESQGIKTLAVNSKEQATVKLVTEAAKSLMADKLAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 EVVGLKLALTGAIKDQ 199
>gi|55820933|ref|YP_139375.1| ribosomal biogenesis GTPase [Streptococcus thermophilus LMG 18311]
gi|55822855|ref|YP_141296.1| ribosomal biogenesis GTPase [Streptococcus thermophilus CNRZ1066]
gi|386344588|ref|YP_006040752.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
thermophilus JIM 8232]
gi|445376173|ref|ZP_21426604.1| GTPase YlqF [Streptococcus thermophilus MTCC 5460]
gi|445390980|ref|ZP_21428327.1| GTPase YlqF [Streptococcus thermophilus MTCC 5461]
gi|55736918|gb|AAV60560.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
gi|55738840|gb|AAV62481.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
gi|339278049|emb|CCC19797.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
thermophilus JIM 8232]
gi|444750019|gb|ELW74873.1| GTPase YlqF [Streptococcus thermophilus MTCC 5461]
gi|444750129|gb|ELW74968.1| GTPase YlqF [Streptococcus thermophilus MTCC 5460]
Length = 284
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ +IL+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKILILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF QG K + N + ++ AK+L ++ + R +G+ +R
Sbjct: 64 ADDNRTKEWRTYFESQGIKTLAINSKEQSTVKLVTDAAKSLMTEKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|451344263|ref|ZP_21913323.1| ribosome biogenesis GTP-binding protein YlqF [Eggerthia
catenaformis OT 569 = DSM 20559]
gi|449336977|gb|EMD16145.1| ribosome biogenesis GTP-binding protein YlqF [Eggerthia
catenaformis OT 569 = DSM 20559]
Length = 289
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+AK E+E++ ++K++D+VIE+ DAR P S+ + D+ L N+ R++++ + D+
Sbjct: 8 INWYPGHMAKAEREIESRIKIVDMVIELVDARAPFSSRNTSFDRILKNKPRLVLMTKSDL 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +++ ++G + N + K+ + A+ S+ K KGL RA+R
Sbjct: 68 ADSQITEKWQSFYKEKGFLSLAVNLKNFKEEKKIINMCLAMLSEKREKEAQKGLKIRAIR 127
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+LIN L KR+ A +PGVT+ + +R KD E D+PGI+P + SD
Sbjct: 128 AMIIGVPNVGKSTLINALAKRKAAIAGNKPGVTKAQQIIRINKDFELFDTPGILPPKYSD 187
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +A+ I + + D+ V+ L
Sbjct: 188 FITSCNVALIGSIKKDILPLDDLFIYAVKYL 218
>gi|116627721|ref|YP_820340.1| ribosomal biogenesis GTPase [Streptococcus thermophilus LMD-9]
gi|116100998|gb|ABJ66144.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
Length = 284
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ +IL+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKILILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF QG K + N + ++ AK+L ++ + R +G+ +R
Sbjct: 64 ADDNRTKEWRTYFESQGIKTLAINSKEQSTVKLVTDAAKSLMTEKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|384861837|ref|YP_005744557.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|302751066|gb|ADL65243.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
str. JKD6008]
Length = 285
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 123/197 (62%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM ++ + +
Sbjct: 1 MAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKKDMSNLNEMS 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
W +F +G + + + G K+ A ++ + ++KGL PRA+RA IVG P
Sbjct: 61 KWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRAIRAMIVGIP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+LIN+L KR + +PGVT+ +W++ G L+ LD+PGI+ + D+ KL
Sbjct: 121 NVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKFEDEEVGKKL 180
Query: 287 AICDDIGERSYDVADVA 303
++ I + + +VA
Sbjct: 181 SLTGAIKDSIVHLDEVA 197
>gi|340398716|ref|YP_004727741.1| GTP-binding protein [Streptococcus salivarius CCHSS3]
gi|338742709|emb|CCB93214.1| GTP-binding protein [Streptococcus salivarius CCHSS3]
Length = 284
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + ++ AK+L +D + R +G+ +R
Sbjct: 64 ADSNRTKEWRSYFESQGIKTLAINSKEQSTVKLVTDAAKSLMTDKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|339634080|ref|YP_004725721.1| GTP-binding protein YlqF [Weissella koreensis KACC 15510]
gi|338853876|gb|AEJ23042.1| GTP-binding protein YlqF [Weissella koreensis KACC 15510]
Length = 292
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 128/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK + +++ +K +D+V E+ DARIPLS+ +P +D LG++ R+LV+ + D+
Sbjct: 5 IQWYPGHMAKAFRLMRENMKYVDIVFELVDARIPLSSRNPELDDVLGDKPRLLVMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W TYF +G V+ + + +++ A+ + ++ KG+ +A+R
Sbjct: 65 ADPSRTKEWITYFETRGLAVVALDSRDRKTPQTITKAARKVLAEKWDHLLEKGVKDKAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVMKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFDD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q LA+ I ++ +V D+A +++ +
Sbjct: 185 QRVGQHLAMTGAIKDQLINVDDIALEVLKFM 215
>gi|417989648|ref|ZP_12630150.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
A2-362]
gi|410537741|gb|EKQ12311.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei
A2-362]
Length = 286
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 124/198 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ +P++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDIVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++ + ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARCIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|363888720|ref|ZP_09316098.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium CM5]
gi|361967341|gb|EHL20163.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium CM5]
Length = 285
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 127/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT +E+ +KL+++V+E+ DAR P+S+ +P +D + + +++VL ++D+
Sbjct: 7 INWYPGHMKKTREEIVKNIKLVNLVVEIVDARAPISSKNPDIDSMINGKSKLVVLTKKDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ + +Y+ ++G K + N G +L + + + + K ++KG++ + +R
Sbjct: 67 ADEENIGKFISYYKEKGIKSVAVNATKKSGISQLINILEQIKEENYQKNKAKGIIKKPLR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN+++ ++ PG+T+ +W++ D+E LD+PGI+ +I D
Sbjct: 127 IMIVGIPNVGKSTLINQIIGKKSAKTGNMPGITKSQQWLKIKGDIELLDTPGILWPKIED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A KLA I ++ ++ D+ ++ L
Sbjct: 187 KFTAQKLAFLGSIRDQVIEIEDIYYEFIKFL 217
>gi|433449601|ref|ZP_20412465.1| GTP-binding protein YlqF [Weissella ceti NC36]
gi|429539115|gb|ELA07153.1| GTP-binding protein YlqF [Weissella ceti NC36]
Length = 292
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 129/211 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK + +++ +K +D+V E+ DARIP+S+ +P +D+ LG++ R++++ + D+
Sbjct: 5 IQWYPGHMAKAFRLMRENMKHVDIVFELVDARIPVSSRNPELDKVLGDKPRLMIMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YF +QG V+ + + +++ A+ + +D KG+ +++R
Sbjct: 65 ADPERTNEWLRYFRQQGMNVVALDTRNHKTPQMITKAARNVLADKWAALAEKGVKDKSIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVTKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA+ I ++ ++ D+A + ++ +
Sbjct: 185 KRVGQHLAMTGAIKDQLVNLDDIALVTLKFM 215
>gi|420161425|ref|ZP_14668190.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|420161562|ref|ZP_14668326.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|394745100|gb|EJF33996.1| GTP-binding protein [Weissella koreensis KCTC 3621]
gi|394745402|gb|EJF34286.1| GTP-binding protein [Weissella koreensis KCTC 3621]
Length = 292
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 128/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK + +++ +K +D+V E+ DARIPLS+ +P +D LG++ R+LV+ + D+
Sbjct: 5 IQWYPGHMAKAFRLMRENMKYVDIVFELVDARIPLSSRNPELDDVLGDKPRLLVMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W TYF +G V+ + + +++ A+ + ++ KG+ +A+R
Sbjct: 65 ADPSRTKEWITYFETRGLAVVALDSRDRKTPQTITKAARKVLAEKWDHLLEKGVKDKAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVMKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFDD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q LA+ I ++ +V D+A +++ +
Sbjct: 185 QRVGQHLAMTGAIKDQLINVDDIALEVLKFM 215
>gi|146318651|ref|YP_001198363.1| ribosomal biogenesis GTPase [Streptococcus suis 05ZYH33]
gi|146320857|ref|YP_001200568.1| ribosomal biogenesis GTPase [Streptococcus suis 98HAH33]
gi|253751770|ref|YP_003024911.1| ribosomal biogenesis GTPase [Streptococcus suis SC84]
gi|253753594|ref|YP_003026735.1| ribosomal biogenesis GTPase [Streptococcus suis P1/7]
gi|253755525|ref|YP_003028665.1| ribosomal biogenesis GTPase [Streptococcus suis BM407]
gi|386577875|ref|YP_006074281.1| GTP-binding protein [Streptococcus suis GZ1]
gi|386579927|ref|YP_006076332.1| ribosomal biogenesis GTPase [Streptococcus suis JS14]
gi|386581951|ref|YP_006078355.1| ribosomal biogenesis GTPase [Streptococcus suis SS12]
gi|403061512|ref|YP_006649728.1| GTPase YlqF [Streptococcus suis S735]
gi|145689457|gb|ABP89963.1| Predicted GTPase [Streptococcus suis 05ZYH33]
gi|145691663|gb|ABP92168.1| Predicted GTPase [Streptococcus suis 98HAH33]
gi|251816059|emb|CAZ51679.1| putative GTPase protein [Streptococcus suis SC84]
gi|251817989|emb|CAZ55771.1| putative GTPase protein [Streptococcus suis BM407]
gi|251819840|emb|CAR45821.1| putative GTPase protein [Streptococcus suis P1/7]
gi|292558338|gb|ADE31339.1| GTP-binding protein [Streptococcus suis GZ1]
gi|319758119|gb|ADV70061.1| ribosomal biogenesis GTPase [Streptococcus suis JS14]
gi|353734097|gb|AER15107.1| ribosomal biogenesis GTPase [Streptococcus suis SS12]
gi|402808838|gb|AFR00330.1| GTPase YlqF [Streptococcus suis S735]
Length = 283
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK L D + R +G+ +R
Sbjct: 64 ADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAKGLMKDKIERLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|422758930|ref|ZP_16812692.1| ribosomal biogenesis GTPase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411765|gb|EFY02673.1| ribosomal biogenesis GTPase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 282
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 119/193 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R++G+ +R
Sbjct: 64 ADATRTKEWKAYYKSQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRNRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDI 292
+ +KLA+ I
Sbjct: 184 ELVGLKLALTGAI 196
>gi|153940438|ref|YP_001391740.1| ribosomal biogenesis GTPase [Clostridium botulinum F str.
Langeland]
gi|384462748|ref|YP_005675343.1| GTP-binding protein [Clostridium botulinum F str. 230613]
gi|152936334|gb|ABS41832.1| GTP-binding protein [Clostridium botulinum F str. Langeland]
gi|295319765|gb|ADG00143.1| GTP-binding protein [Clostridium botulinum F str. 230613]
Length = 292
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|387761208|ref|YP_006068185.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
salivarius 57.I]
gi|339291975|gb|AEJ53322.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
salivarius 57.I]
Length = 284
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + ++ AK+L +D + R +G+ +R
Sbjct: 64 ADSNRTKEWRSYFESQGIKTLAINSKEQSTVKLVTDAAKSLMTDKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|373454398|ref|ZP_09546264.1| ribosome biogenesis GTP-binding protein YlqF [Dialister
succinatiphilus YIT 11850]
gi|371935673|gb|EHO63416.1| ribosome biogenesis GTP-binding protein YlqF [Dialister
succinatiphilus YIT 11850]
Length = 285
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 124/212 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KT++ ++D LK +DVV E+ DARIP S+ +P++++ + + RI++LN+ D+
Sbjct: 3 IQWFPGHMTKTKRMIEDHLKAVDVVAELLDARIPASSANPMVEELVKGKPRIVILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +++ K+ V+ + G KL L + A + K KGL R+VR
Sbjct: 63 ADPRQTDRWVSFYRKRNIPVVPMSVGNGKNKKKLLSLIRETAKPILDKWYRKGLKNRSVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PNVGKSSLIN L A PG TR +WVR + L+ LD+PG++ + D
Sbjct: 123 LMILGIPNVGKSSLINFLAGTAAARTANTPGHTRGKQWVRLSEGLDLLDTPGVLWPKFDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q AA++LA I ++ +V +L+ LA
Sbjct: 183 QTAALRLAATGAIAGDVFNPDEVVPVLLSSLA 214
>gi|363895220|ref|ZP_09322240.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium ACC19a]
gi|361959977|gb|EHL13238.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium ACC19a]
Length = 285
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 127/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT +E+ +KL+++V+E+ DAR P+S+ +P +D + + +++VL ++D+
Sbjct: 7 INWYPGHMKKTREEIVKNIKLVNLVVEIVDARAPISSKNPDIDSMINGKSKLVVLTKKDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ + +Y+ ++G K + N G +L + + + + K ++KG++ + +R
Sbjct: 67 ADEENIGKFISYYKEKGIKSVAVNATKKSGISQLINILEQIKEENYQKNKAKGIIKKPLR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN+++ ++ PG+T+ +W++ D+E LD+PGI+ +I D
Sbjct: 127 IMIVGIPNVGKSTLINQIIGKKSAKTGNMPGITKSQQWLKIKGDIELLDTPGILWPKIED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A KLA I ++ ++ D+ ++ L
Sbjct: 187 KFTAQKLAFLGSIRDQVIEIEDIYYEFIKFL 217
>gi|319788757|ref|YP_004090072.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus albus 7]
gi|315450624|gb|ADU24186.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus albus 7]
Length = 298
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 118/212 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQW+PGH+AKT + + +KL+D V+E+ DARIP S+ +P + + GN+ R+++LN+ D
Sbjct: 7 VQWFPGHMAKTRRIMASNMKLVDAVVEITDARIPYSSRNPEIKKICGNKPRMVLLNKADS 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ +QG + ++ + G K + K L S+ K ++G+ R +R
Sbjct: 67 ADADVTSMWIEYYKQQGVPALATDCRSGRNVNKFYPMLKELLSEQIEKWDTRGMTGRPIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSS INRL +M RPGVTR +WV E LD PG++ + D
Sbjct: 127 MMIVGIPNVGKSSFINRLAGAKMAKVEDRPGVTRGKQWVALEDGFELLDMPGVLWPKFDD 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
+ +LA + + D +A L++ LA
Sbjct: 187 KLVGERLAFTGAVKDVILDTEYLACRLLEYLA 218
>gi|402839395|ref|ZP_10887885.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium OBRC8]
gi|402270297|gb|EJU19564.1| ribosome biogenesis GTP-binding protein YlqF [Eubacteriaceae
bacterium OBRC8]
Length = 285
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT +E+ +KL+++V+E+ DAR P+S+ +P +D + + +++VL ++D+
Sbjct: 7 INWYPGHMKKTREEIIKNIKLVNLVVEIVDARAPISSKNPDIDSMINGKSKLVVLTKKDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
D + +Y+ ++G K + N G L + + + + K +++G++ + +R
Sbjct: 67 ADEEDMGKFISYYKEKGIKSVAINSTKKTGISPLINILEQIKEENYQKNKARGIIKKPLR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKS+LIN+++ ++ PG+T+ +W++ D+E LD+PGI+ +I D
Sbjct: 127 IMIVGIPNVGKSTLINQIIGKKSAKTGNTPGITKSQQWLKIKGDIELLDTPGILWPKIED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ A KLA I ++ ++ D+ ++ L
Sbjct: 187 KITAQKLAFLGSIRDQVIEIEDIYYEFIKFL 217
>gi|225868571|ref|YP_002744519.1| GTPase protein [Streptococcus equi subsp. zooepidemicus]
gi|225701847|emb|CAW99305.1| putative GTPase protein [Streptococcus equi subsp. zooepidemicus]
Length = 284
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMLLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ KQG K + N + +++ AK L +D + R +G+ +R
Sbjct: 64 ADSTHTKKWQQYYEKQGIKTLAINAKEQATVKRVTEAAKELMADKLRRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIATVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|19746107|ref|NP_607243.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS8232]
gi|94994427|ref|YP_602525.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS10750]
gi|19748281|gb|AAL97742.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|94547935|gb|ABF37981.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
Length = 282
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|195978101|ref|YP_002123345.1| ribosomal biogenesis GTPase [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974806|gb|ACG62332.1| 50S ribosomal subunit maturation GTPase RbgA [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 284
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMLLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ KQG K + N + +++ AK L +D + R +G+ +R
Sbjct: 64 ADNTHTKKWQQYYEKQGIKTLAINAKEQATVKRVTEAAKELMADKLHRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIATVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|377830814|ref|ZP_09813805.1| GTP-binding protein [Lactobacillus mucosae LM1]
gi|377555262|gb|EHT16950.1| GTP-binding protein [Lactobacillus mucosae LM1]
Length = 290
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 123/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DAR+P S+ +P +D G++ R+L+L + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDIVFELVDARVPYSSQNPEVDLAAGDKPRLLILTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF G V+ + + ++ AK + ++ ++KG+ RA+R
Sbjct: 64 ADPEVTKEWLQYFKDHGQPVLALDSRARSVAKTVTNAAKQVLAEKLANEQAKGMKKRAIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA+ I + + DVA +Q L
Sbjct: 184 EKEGLMLALSGAIKDSLFAKDDVALFALQYL 214
>gi|386362702|ref|YP_006072033.1| ribosome biogenesis GTPase A [Streptococcus pyogenes Alab49]
gi|350277111|gb|AEQ24479.1| ribosome biogenesis GTPase A [Streptococcus pyogenes Alab49]
Length = 282
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|228476732|ref|ZP_04061398.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
salivarius SK126]
gi|228251603|gb|EEK10704.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
salivarius SK126]
Length = 284
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + ++ AK+L +D + R +G+ +R
Sbjct: 64 ADSNRTKEWRSYFESQGIKTLAINSKEQSTVKLVTDAAKSLMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|340749990|ref|ZP_08686837.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
mortiferum ATCC 9817]
gi|229419633|gb|EEO34680.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
mortiferum ATCC 9817]
Length = 287
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 123/219 (56%), Gaps = 2/219 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +KD ++L+D+V+EV DARIPLS+ +P + + N+KR++VLN
Sbjct: 2 SMTKINWYPGHMKKTKDLIKDNMQLIDIVLEVVDARIPLSSKNPDITVFAKNKKRVIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ + W YF + +V+ + + G L + ++++ K +KGL
Sbjct: 62 KSDLVDKKELAYWKKYFKENNFADEVLEISAETGFNIKGLYSIIDKVSAEKKEKMMAKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
R +VG PNVGKS LINR++ + +PG T+ +WVR + LE LD PGI+
Sbjct: 122 RKVNTRLMVVGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVRIKEGLELLDMPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LAI I + + ++A IL+ + R
Sbjct: 182 WPKFESEEVGQNLAITGAIRDEILPIEEIAGILISKMIR 220
>gi|387784251|ref|YP_006070334.1| GTP-binding protein [Streptococcus salivarius JIM8777]
gi|338745133|emb|CCB95499.1| GTP-binding protein [Streptococcus salivarius JIM8777]
Length = 284
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + ++ AK+L +D + R +G+ +R
Sbjct: 64 ADSNRTKEWRSYFESQGIKTLAINSKEQSTVKLVTDAAKSLMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|168184648|ref|ZP_02619312.1| GTP-binding protein [Clostridium botulinum Bf]
gi|237795878|ref|YP_002863430.1| ribosomal biogenesis GTPase [Clostridium botulinum Ba4 str. 657]
gi|182672284|gb|EDT84245.1| GTP-binding protein [Clostridium botulinum Bf]
gi|229262006|gb|ACQ53039.1| GTP-binding protein [Clostridium botulinum Ba4 str. 657]
Length = 292
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|241896009|ref|ZP_04783305.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
gi|241870740|gb|EER74491.1| GTP-binding protein [Weissella paramesenteroides ATCC 33313]
Length = 290
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 124/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LK +D+V E+ DARIPLS+ +P +D LG++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKHVDIVFELVDARIPLSSRNPELDDVLGDKPRLLIMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W +YF QG V+ + + +++ A+ + +D KG+ +A+R
Sbjct: 65 ADPERTSIWRSYFESQGLTVVSLDTRGHKTPQIITKAARVVLADKWQNLEEKGVQDKAIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVTKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFVD 184
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q LA+ I ++ ++ D+A
Sbjct: 185 QRVGQHLAMTGAIKDQLINLDDIA 208
>gi|339640338|ref|ZP_08661782.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
oral taxon 056 str. F0418]
gi|339453607|gb|EGP66222.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus sp.
oral taxon 056 str. F0418]
Length = 283
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQGYFEIQGIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|417788285|ref|ZP_12435968.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
salivarius NIAS840]
gi|417810322|ref|ZP_12457001.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|418961322|ref|ZP_13513209.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
gi|334308462|gb|EGL99448.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
salivarius NIAS840]
gi|335349118|gb|EGM50618.1| GTP-binding protein [Lactobacillus salivarius GJ-24]
gi|380344989|gb|EIA33335.1| GTP-binding protein [Lactobacillus salivarius SMXD51]
Length = 285
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 1/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+ LK +D+V+E+ DAR+P S+ +P + + L ++ I+VL + D+
Sbjct: 4 IQWFPGHMAKALRQVKENLKSVDIVLELVDARLPESSRNPQLAEVLQDKPSIIVLTKMDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A+ W Y+ G I N G + ++ + LA + R+ KG+ + +R
Sbjct: 64 ADPAETKKWINYYESMGQPAIAVNSNSGNLKIIEKKIKEILADKLQ-SRKEKGIQNQKLR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+N L+K+ + RPGVT+ +W++ GKDL+ LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLLNHLVKKNVAQTGNRPGVTKAQQWLKAGKDLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I + Y DVA V+
Sbjct: 183 PLVGKKLALTGAIKDTLYAKDDVALYAVEHF 213
>gi|239623746|ref|ZP_04666777.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521777|gb|EEQ61643.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 287
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ +K+ +KL+D+VIE+ DAR+PLS+ +P +D + R+++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMKEDIKLIDLVIELVDARVPLSSRNPDIDDLAKGKARMVLLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKR-RSKGLLPRAV 218
WA +F + + + + GT+K + A ++R R +G++ R +
Sbjct: 63 ADERVNAQWAAWFEAKNIHAVKVDSR-NKGTLKQVQSVVQEACKEKIERDRKRGIMNRPI 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R +VG PNVGKS+ IN + +PGVT+ +W+R K LE LD+PGI+ R
Sbjct: 122 RTMVVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGNQWIRLNKTLELLDTPGILWPRFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ+ +KLA+ I ++ + D+A +++L
Sbjct: 182 DQSVGLKLALIGSINDQILNKDDLACQCIRIL 213
>gi|386317016|ref|YP_006013180.1| ribosomal biogenesis GTPase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410494750|ref|YP_006904596.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417928741|ref|ZP_12572129.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|323127303|gb|ADX24600.1| ribosomal biogenesis GTPase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|340766615|gb|EGR89141.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
dysgalactiae subsp. equisimilis SK1250]
gi|410439910|emb|CCI62538.1| GTP-binding protein engA [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 282
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|225870571|ref|YP_002746518.1| ribosomal biogenesis GTPase [Streptococcus equi subsp. equi 4047]
gi|225699975|emb|CAW93947.1| putative GTPase protein [Streptococcus equi subsp. equi 4047]
Length = 284
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMLLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ KQG K + N + +++ AK L +D + R +G+ +R
Sbjct: 64 ADNTHTKKWQQYYEKQGIKTLAINAKEQATVKRVTEAAKELMADKLRRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIATVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|414563982|ref|YP_006042943.1| GTPase protein [Streptococcus equi subsp. zooepidemicus ATCC 35246]
gi|338847047|gb|AEJ25259.1| GTPase protein [Streptococcus equi subsp. zooepidemicus ATCC 35246]
Length = 284
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMLLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ KQG K + N + +++ AK L +D + R +G+ +R
Sbjct: 64 ADNTHTKKWQQYYEKQGIKTLAINAKEQATVKRVTEAAKELMADKLRRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIATVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|148380400|ref|YP_001254941.1| ribosomal biogenesis GTPase [Clostridium botulinum A str. ATCC
3502]
gi|148289884|emb|CAL83992.1| putative GTPase [Clostridium botulinum A str. ATCC 3502]
Length = 292
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWIDSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|392948926|ref|ZP_10314526.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
pentosus KCA1]
gi|392435899|gb|EIW13823.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
pentosus KCA1]
Length = 284
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 120/204 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++D L L+D+V E+ DARIP+++ +P +++ + + +L++ ++D+
Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTIQQKPHLLIMTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG I + + ++++ A + +D K ++G+ R +R
Sbjct: 64 ADSQATADWVKYYEAQGQVAIAVDSRSRTIGKQMTQAASDMLADKLAKIAARGITNRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N ++ +++ RPGVT+ +W++ K LE LD+PGI+ + D
Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASKKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I E Y DVA
Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVA 207
>gi|153930882|ref|YP_001384617.1| ribosomal biogenesis GTPase [Clostridium botulinum A str. ATCC
19397]
gi|153936572|ref|YP_001388134.1| ribosomal biogenesis GTPase [Clostridium botulinum A str. Hall]
gi|168180677|ref|ZP_02615341.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|387818663|ref|YP_005679010.1| 50s ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Clostridium botulinum H04402 065]
gi|421833916|ref|ZP_16269084.1| GTPase YlqF [Clostridium botulinum CFSAN001627]
gi|152926926|gb|ABS32426.1| GTP-binding protein [Clostridium botulinum A str. ATCC 19397]
gi|152932486|gb|ABS37985.1| GTP-binding protein [Clostridium botulinum A str. Hall]
gi|182668420|gb|EDT80399.1| GTP-binding protein [Clostridium botulinum NCTC 2916]
gi|322806707|emb|CBZ04276.1| 50s ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Clostridium botulinum H04402 065]
gi|409744796|gb|EKN43240.1| GTPase YlqF [Clostridium botulinum CFSAN001627]
Length = 292
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P ++ GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIEDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWIDSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|357637896|ref|ZP_09135769.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
urinalis 2285-97]
gi|418416463|ref|ZP_12989662.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
urinalis FB127-CNA-2]
gi|357586350|gb|EHJ55758.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
urinalis 2285-97]
gi|410874281|gb|EKS22212.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
urinalis FB127-CNA-2]
Length = 285
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 125/204 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSLNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ K+G K + N + K++ AKAL +D K +G+ + +R
Sbjct: 64 ADSQRTKQWRDFYEKKGIKTLSINSKEQSTVKKVTDAAKALMTDKLKKLEDRGIQKQTLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GK++L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKTTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+ +KLA+ I ++ + DV
Sbjct: 184 EQVGLKLALTGAIKDQLLPMDDVT 207
>gi|390629742|ref|ZP_10257734.1| GTP-binding protein RbgA [Weissella confusa LBAE C39-2]
gi|390484914|emb|CCF30082.1| GTP-binding protein RbgA [Weissella confusa LBAE C39-2]
Length = 292
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 122/204 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LK +D+V E+ DARIP+S+ +P +D+ LG + R+LV+ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKYVDIVFELVDARIPVSSRNPELDEVLGQKPRLLVMTKTDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW YF QG +V+ + + +++ A+ + +D KG+ + +R
Sbjct: 65 ADPERTKAWKKYFEAQGMEVVALDTRGHKTPQIMTKAARKVLADKWAALEEKGVKDKPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+L+N L+ + + RPGVT+ L+W++ +LE LD+PG++ + D
Sbjct: 125 ALVAGIPNVGKSTLLNHLVTKNVAITGDRPGVTKKLQWLKTPTNLELLDTPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q LA+ I ++ + D+A
Sbjct: 185 QRVGEHLAMTGAIKDQLINQDDIA 208
>gi|90961694|ref|YP_535610.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|227890782|ref|ZP_04008587.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|301300771|ref|ZP_07206955.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|385840372|ref|YP_005863696.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|90820888|gb|ABD99527.1| GTP-binding protein [Lactobacillus salivarius UCC118]
gi|227867191|gb|EEJ74612.1| GTP-binding protein [Lactobacillus salivarius ATCC 11741]
gi|300214493|gb|ADJ78909.1| GTP-binding protein [Lactobacillus salivarius CECT 5713]
gi|300851621|gb|EFK79321.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 285
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 123/211 (58%), Gaps = 1/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+ LK +D+V+E+ DAR+P S+ +P + + L ++ I+VL + D+
Sbjct: 4 IQWFPGHMAKALRQVKENLKSVDIVLELVDARLPESSRNPQLAEVLQDKPSIIVLTKMDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A+ W Y+ G I N G + ++ + LA + R+ KG+ + +R
Sbjct: 64 ADPAETKRWINYYESMGQPAIAVNSNSGNLKIIEKKIKEILADKLQ-SRKEKGIQNQKLR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+N L+K+ + RPGVT+ +W++ GKDL+ LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLLNHLVKKNVAQTGNRPGVTKAQQWLKAGKDLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA+ I + Y DVA V+
Sbjct: 183 PLVGKKLALTGAIKDTLYAKDDVALYAVEHF 213
>gi|258539617|ref|YP_003174116.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705]
gi|385835265|ref|YP_005873039.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
rhamnosus ATCC 8530]
gi|257151293|emb|CAR90265.1| GTP-binding protein [Lactobacillus rhamnosus Lc 705]
gi|355394756|gb|AER64186.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
rhamnosus ATCC 8530]
Length = 285
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 131/217 (60%), Gaps = 3/217 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+++EV DAR P S+ +P++D+ +G++ RI++LN++D+
Sbjct: 3 IQWFPGHMAKARKQVQEKIKQVDLILEVVDARTPESSRNPMLDELVGDKPRIIILNKQDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ QG I + Q ++ + A L ++ +++++G+ ++
Sbjct: 63 ADPVLTNEWVRYYQTQGFAAIAIDAQHAKRLQQIPQAAAKLMAEKIARKKARGIRNPMIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+++ + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 123 AMCIGIPNVGKSTVLNRLVRKNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAI--LVQMLARIP 314
Q ++LA I + + DV + L +A P
Sbjct: 183 QTIGMRLAFTGAIADAVFQ-EDVVGLYGLTYFMAHYP 218
>gi|421768951|ref|ZP_16205660.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
rhamnosus LRHMDP2]
gi|421771214|ref|ZP_16207874.1| GTP-binding protein [Lactobacillus rhamnosus LRHMDP3]
gi|411185347|gb|EKS52475.1| 50S ribosomal subunit maturation GTPase RbgA [Lactobacillus
rhamnosus LRHMDP2]
gi|411185800|gb|EKS52926.1| GTP-binding protein [Lactobacillus rhamnosus LRHMDP3]
Length = 285
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 131/217 (60%), Gaps = 3/217 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+++EV DAR P S+ +P++D+ +G++ RI++LN++D+
Sbjct: 3 IQWFPGHMAKARKQVQEKIKQVDLILEVVDARTPESSRNPMLDELVGDKPRIIILNKQDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ QG I + Q ++ + A L ++ +++++G+ ++
Sbjct: 63 ADPVLTNEWVRYYQTQGFAAIAIDAQHAKRLQQIPQAAAKLMAEKIARKKARGIRNPMIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+++ + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 123 AMCIGIPNVGKSTVLNRLVRKNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAI--LVQMLARIP 314
Q ++LA I + + DV + L +A P
Sbjct: 183 QTIGMRLAFTGAIADAVFQ-EDVVGLYGLTYFMAHYP 218
>gi|420156939|ref|ZP_14663779.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
MSTE9]
gi|394756949|gb|EJF40008.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium sp.
MSTE9]
Length = 289
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 118/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V WYPGH+ +T+++++ LKL+D+ E+ DAR+P+S+ +P++D + N+ R++++N+ D+
Sbjct: 7 VHWYPGHMTRTKRQIEKSLKLVDIAAEMIDARVPVSSRNPVLDSLIQNKPRVILMNKSDL 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W ++ QG + + + G L + + SD R+KG++ R VR
Sbjct: 67 ADSAQTERWIRFYQSQGISAVALDSRSGKNLKAFFPLVRDVLSDRIAAWRAKGMVGRPVR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN+L RPGVTR +W G E LD+PG++ + D
Sbjct: 127 VMVVGVPNVGKSSFINKLSHGGKANVEDRPGVTRNNQWFTLGGGFELLDTPGVLWPKFED 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+LA + + D +AA L+++L
Sbjct: 187 PLVGERLAFTGAVKDDVVDTEHLAARLLEVL 217
>gi|418964799|ref|ZP_13516587.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
constellatus subsp. constellatus SK53]
gi|383344200|gb|EID22369.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
constellatus subsp. constellatus SK53]
Length = 283
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + + ++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVSDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADSDVTKEWRRYFESQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EKVALKLALT 193
>gi|433655064|ref|YP_007298772.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293253|gb|AGB19075.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 278
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+AKT++ +++ LK++D+V E+ DARIP S+ +PL+D+ + N+KRI++LN+ D+
Sbjct: 3 QWYPGHMAKTKRLIEENLKIVDIVYELIDARIPKSSRNPLIDELVKNKKRIILLNKADLS 62
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
A W YF K G + N ++ L S++ ++R KG+ + +RA
Sbjct: 63 DSAVNKMWNEYFKKLGIASLNINSLNSSSIKEIYELTLKECSNIIDRKRQKGIKAK-LRA 121
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
IVG PNVGKS+LIN L K + +PGVT+ +W+R + LD+PGI+ + D+
Sbjct: 122 MIVGIPNVGKSTLINSLSKTKSAKTGNKPGVTKAKQWIRTPY-FDLLDTPGILWPKFEDE 180
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
I LA+ I + + ++A L+++L +
Sbjct: 181 HVGIMLALTAAIKDELLNHEELAFSLLKILKQ 212
>gi|339450881|ref|ZP_08654251.1| GTP-binding protein YlqF [Leuconostoc lactis KCTC 3528]
Length = 281
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ DARIP S+ +P +D+ +G++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDARIPESSRNPEVDKLIGSKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F QG V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRAWKQHFEAQGHTVLVLDTRDPRTPQLVTKAARRAVEAKKAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 ALIAGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KLA+ + + + D L+
Sbjct: 185 QTVGLKLALTGAVKDTIFAKDDAVLFLLDFF 215
>gi|312862638|ref|ZP_07722878.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
vestibularis F0396]
gi|311101498|gb|EFQ59701.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
vestibularis F0396]
Length = 284
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG K + N + ++ AK+L D + R +G+ +R
Sbjct: 64 ADSNRTKEWRSYFETQGIKTLAINSKEQSTVKLVTDAAKSLMDDKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|418576371|ref|ZP_13140517.1| ribosomal biogenesis GTPase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325433|gb|EHY92565.1| ribosomal biogenesis GTPase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 277
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 123/197 (62%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+AK ++E+ +QLK +DVV E+ DARIP S+ +P++D+ + + R+++LN++DM ++ +
Sbjct: 1 MAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIQQKPRVVILNKKDMANLKELE 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
W +YF ++G + + + G G ++ + A + K + KGL PRA+RA IVG P
Sbjct: 61 KWESYFKEKGFYPVAIDAKHGKGLKQVEQTAIKATKEKFEKEKQKGLKPRAIRAMIVGIP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+LIN+L + + PGVT+ +W++ G+ L+ LD+PGI+ + DQ KL
Sbjct: 121 NVGKSTLINKLANKSIAKTGNTPGVTKQQQWIKVGQSLQLLDTPGILWPKFEDQLVGKKL 180
Query: 287 AICDDIGERSYDVADVA 303
++ I + + +VA
Sbjct: 181 SVTGAIKDSIVHLDEVA 197
>gi|403386846|ref|ZP_10928903.1| GTPase YlqF [Clostridium sp. JC122]
Length = 282
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LKL+D VIE+RDARI S+ +P ++ N+ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTRRQIKENLKLVDAVIEIRDARIVKSSANPDIEDICQNKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + TKV+ N G+G + + + + R+KG++ R
Sbjct: 63 SEEKVTKQWVKELSNEHTKVLSVNCLKGLGLKNIKPALDEMLKEKHDNLRNKGVVNIVTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN+L K + +PGVTR +W++ +E +D+PG++ + D
Sbjct: 123 VMVVGIPNVGKSTFINKLAKNNIAKTGDKPGVTRNKQWIKTKIGIELMDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ ++A L++ L
Sbjct: 183 ETVGLDLAFTGAIKDEIMDIEELALKLIETL 213
>gi|400290291|ref|ZP_10792318.1| ribosomal biogenesis GTPase [Streptococcus ratti FA-1 = DSM 20564]
gi|399921082|gb|EJN93899.1| ribosomal biogenesis GTPase [Streptococcus ratti FA-1 = DSM 20564]
Length = 283
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 114/190 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+P S+ +P++ + +G++ R+++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPFSSQNPMLTKIVGDKPRLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF QG + N + K+ AK L + K R +G+ +R
Sbjct: 64 ADGSRTKEWQDYFESQGITALAINSKEQSAVKKIGEAAKKLMASKLSKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKVAAVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ +KLA+
Sbjct: 184 ETVGLKLALT 193
>gi|365902731|ref|ZP_09440554.1| GTPase [Lactobacillus malefermentans KCTC 3548]
Length = 287
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 125/214 (58%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++++L L+D+V E+ DARIPLS+ +P + + + ++ ++V+ + D+
Sbjct: 4 IQWFPGHMAKAIRQVEEKLPLVDIVFELVDARIPLSSRNPELKRLMKDKPHLIVMTKMDL 63
Query: 160 ISMADRNAWATYFAKQ-GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAV 218
W YF + G + I + + + ++++ +++ +D KGL R +
Sbjct: 64 ADPEMTKKWIAYFKNEVGVRAIAIDSKANITVKNITKITESILADKLAHEEEKGLKERPI 123
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +G PNVGKS+L+NRL+ R++ PGVT+ +W+R K LE LD+PGI+ +
Sbjct: 124 RAMTIGIPNVGKSTLLNRLVNRKVAQVGDTPGVTKGQQWLRSSKKLELLDTPGILWPKFE 183
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
D KLA+ I ++ + DVA ++ +
Sbjct: 184 DPETGQKLALTGAIKDQRFASDDVALFAIKYFKQ 217
>gi|125718011|ref|YP_001035144.1| ribosomal biogenesis GTPase [Streptococcus sanguinis SK36]
gi|125497928|gb|ABN44594.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
Length = 283
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF Q + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQEIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|422882299|ref|ZP_16928755.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK355]
gi|332360460|gb|EGJ38271.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK355]
Length = 283
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF Q + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQEIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|406658358|ref|ZP_11066498.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus iniae
9117]
gi|405578573|gb|EKB52687.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus iniae
9117]
Length = 284
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W ++ QG K + N + K++ AK L +D K R +G+ +R
Sbjct: 64 ADKSRTQEWRRFYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQKLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QLVGLKLALTGAIKDQ 199
>gi|71903521|ref|YP_280324.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS6180]
gi|94988630|ref|YP_596731.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS9429]
gi|94992453|ref|YP_600552.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS2096]
gi|209559441|ref|YP_002285913.1| ribosomal biogenesis GTPase [Streptococcus pyogenes NZ131]
gi|306827336|ref|ZP_07460623.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pyogenes ATCC 10782]
gi|417856859|ref|ZP_12501918.1| GTPase YlqF [Streptococcus pyogenes HKU QMH11M0907901]
gi|71802616|gb|AAX71969.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
gi|94542138|gb|ABF32187.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
gi|94545961|gb|ABF36008.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
gi|209540642|gb|ACI61218.1| GTP-binding protein [Streptococcus pyogenes NZ131]
gi|304430483|gb|EFM33505.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pyogenes ATCC 10782]
gi|387933814|gb|EIK41927.1| GTPase YlqF [Streptococcus pyogenes HKU QMH11M0907901]
Length = 282
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|169350422|ref|ZP_02867360.1| hypothetical protein CLOSPI_01190 [Clostridium spiroforme DSM 1552]
gi|169292742|gb|EDS74875.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
spiroforme DSM 1552]
Length = 288
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 114/197 (57%)
Query: 98 RPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNRE 157
+ +QW+PGH+AK +E+ +++KL+D+V+E+ DAR PLS+ +P+ DQ N+ R++V+ ++
Sbjct: 3 KQIQWFPGHMAKARREISEKMKLIDIVVELVDARAPLSSKNPMFDQICNNKPRLIVMTKK 62
Query: 158 DMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
D+ W YF + I N + ++ + K + + + +GL RA
Sbjct: 63 DLADDKVTALWIEYFKSKNLHAICVNLKNFNEYQQVINVCKEILKEKMEREAKRGLKSRA 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
+RA I+G PNVGKS+ INRL KR+ RPGVT+ + +R KD E D+PG++ R
Sbjct: 123 MRAMILGIPNVGKSTFINRLAKRKATVTGNRPGVTKAQQIIRVDKDFELFDTPGVLWPRF 182
Query: 278 SDQAAAIKLAICDDIGE 294
D A +A+ I +
Sbjct: 183 EDINIARNIALIGSIKQ 199
>gi|421893234|ref|ZP_16323784.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Streptococcus pyogenes NS88.2]
gi|379981030|emb|CCG27506.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Streptococcus pyogenes NS88.2]
Length = 282
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|304440379|ref|ZP_07400268.1| ribosome biogenesis GTP-binding protein YlqF [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304371131|gb|EFM24748.1| ribosome biogenesis GTP-binding protein YlqF [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 281
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 124/209 (59%), Gaps = 3/209 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT +E++++ KL+D VIEV DARIP S+ +PL ++ + + R+++LN+ED+
Sbjct: 7 INWFPGHMKKTIEEIENKQKLVDFVIEVVDARIPRSSRNPLFNEII-KKPRLIILNKEDL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
S ++ AW K + I N G + + + +K L D +++ KG+ A+R
Sbjct: 66 ASPSENRAWVEAIDKTNDRAILYNSNSGNPNV-IVKESKILMKDFIERQKEKGISTGALR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A IVG PN GKS+ IN + KRR RPGVT+ +W+R DL LD+PG++ ++ D
Sbjct: 125 AMIVGIPNSGKSTFINNVSKRRATKVGNRPGVTKTNQWIRINDDLHLLDTPGVLWHKL-D 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
+ A + LA I + D+ +A ++
Sbjct: 184 KEAQLHLAWTGAIKDEIMDIETLAFEFIK 212
>gi|335357305|ref|ZP_08549175.1| GTP-binding protein [Lactobacillus animalis KCTC 3501]
Length = 284
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 122/204 (59%), Gaps = 1/204 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++K+ LKL+DVV+E+ DAR+P S+ +P + L ++ I+VL + D+
Sbjct: 4 IQWFPGHMAKALRQVKENLKLVDVVLELVDARLPESSRNPQLKDLLQDKPSIIVLTKMDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ K G + N G + ++ + LA + ++++G+L + ++
Sbjct: 64 ADPKETRKWIEYYEKMGQPAVAINSVQGSLKVIDKKIKEVLAEKL-ANKKARGILSQRIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+G PNVGKS+L+N L+K+ + RPGVT+ +W++ GKDL+ LD+PGI+ + D
Sbjct: 123 VMCIGIPNVGKSTLLNHLVKKNVAQVGNRPGVTKSQQWLKAGKDLQLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ I + Y DVA
Sbjct: 183 PIVGKKLALTGAIKDTLYAEDDVA 206
>gi|331701418|ref|YP_004398377.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
buchneri NRRL B-30929]
gi|329128761|gb|AEB73314.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
buchneri NRRL B-30929]
Length = 290
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 116/204 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++ ++ L L+DVV EV DARIPL++ +P + + ++ + ++ + D+
Sbjct: 5 IQWFPGHMAKAIRQFEENLSLVDVVFEVIDARIPLTSQNPEIRRISADKPHLYIMTKRDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
NAW YFA+ I + + G + + + D + + KG+ R +R
Sbjct: 65 ADPQLTNAWLQYFAEHNQPAIAIDAKTKFGINNVISVISPILRDKLQREQDKGMKKRPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+++NRL+ RR RPGVT+ +W++ LE LD+PGI+ + S
Sbjct: 125 AISVGVPNVGKSTVLNRLVNRRAAQVGNRPGVTKGQQWLKSTDKLELLDTPGILWPKFSS 184
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q A KLA+ I E Y D+A
Sbjct: 185 QEVADKLALTGAIKESVYASDDIA 208
>gi|422862517|ref|ZP_16909149.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK408]
gi|327474217|gb|EGF19624.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
sanguinis SK408]
Length = 283
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF Q + N + K++ AK L +D +++ +G+ +R
Sbjct: 64 ADPVRIKEWQSYFESQEIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 ETVALKLALT 193
>gi|407718252|ref|YP_006795657.1| GTP-binding protein RbgA [Leuconostoc carnosum JB16]
gi|407242008|gb|AFT81658.1| GTP-binding protein RbgA [Leuconostoc carnosum JB16]
Length = 284
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ L+L+DVV E+ DARIP S+ +P +D+ +G++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLRLVDVVFELVDARIPSSSRNPEVDKLIGSKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G V+ + + +++ A+ S + ++G+ + +R
Sbjct: 65 ADPDQTRLWKAYFESEGHTVLVLDTRDPKTPQLVTKAARRAVSSKKEAQLARGIHDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMISGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q+ +KLA+ + + + D A L+
Sbjct: 185 QSIGMKLALTGAVKDAIFAKDDAALFLIAFF 215
>gi|417092810|ref|ZP_11957364.1| GTP1/OBG protein [Streptococcus suis R61]
gi|353532170|gb|EHC01844.1| GTP1/OBG protein [Streptococcus suis R61]
Length = 283
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK+L + + R +G+ +R
Sbjct: 64 ADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAKSLMKEKIERLRQRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|170759247|ref|YP_001787754.1| ribosomal biogenesis GTPase [Clostridium botulinum A3 str. Loch
Maree]
gi|169406236|gb|ACA54647.1| GTP-binding protein [Clostridium botulinum A3 str. Loch Maree]
Length = 292
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +++K+ LK++D +IE+RDARI S+ +P + GN+ RI++LN++D+
Sbjct: 3 INWFPGHMAKTRRQIKESLKMVDAIIEIRDARIVSSSKNPDIKDICGNKPRIILLNKKDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ KV+ N G G K+ L + + + ++KGL+ R
Sbjct: 63 AEDKVTKKWINSLSQDNIKVLAVNSVTGEGLNKIKPTLNELLKEKHERMKNKGLVKIVDR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K + RPGVT+ +W++ D+E +D+PG++ ++
Sbjct: 123 VMVVGIPNVGKSSFINKMAKNSIAKVGDRPGVTKSKQWIKTKIDIELMDTPGVLWPKLDS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A LV+ L
Sbjct: 183 EIVQLNLAFTGAIKDEIMDIETLALRLVERL 213
>gi|139473751|ref|YP_001128467.1| ribosomal biogenesis GTPase [Streptococcus pyogenes str. Manfredo]
gi|134271998|emb|CAM30236.1| putative GTPase protein [Streptococcus pyogenes str. Manfredo]
Length = 282
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKLQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|334880484|emb|CCB81225.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
pentosus MP-10]
Length = 284
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 120/204 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++D L L+D+V E+ DARIP+++ +P +++ + + +L++ ++D+
Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTIQQKPHLLIMTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG I + + ++++ A + +D K ++G+ R +R
Sbjct: 64 ADPQATADWVKYYEAQGQVAIAVDSRSRTIGKQMTQAATDMLADKLAKIAARGITNRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N ++ +++ RPGVT+ +W++ K LE LD+PGI+ + D
Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASKKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I E Y DVA
Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVA 207
>gi|262039470|ref|ZP_06012774.1| ribosome biogenesis GTP-binding protein YlqF [Leptotrichia
goodfellowii F0264]
gi|261746537|gb|EEY34072.1| ribosome biogenesis GTP-binding protein YlqF [Leptotrichia
goodfellowii F0264]
Length = 292
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 114/206 (55%), Gaps = 2/206 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+ + + LK++DVVIE+ DARIPLS+ +P + + ++++I+VLN+ D+
Sbjct: 3 INWYPGHMKKTKDLIVENLKIIDVVIEILDARIPLSSKNPDISKLAKSKQKIVVLNKVDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGT--MKLSRLAKALASDVNVKRRSKGLLPRA 217
+ D W YF K F + GT +L ++ + SD K + KGL
Sbjct: 63 VDTKDLKKWEEYFLKNEISDYFVALSVEKGTNFNELRKITDKIYSDKLEKMKKKGLRKTE 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
VRA IVG PNVGKS IN+ + + PG TR +W++ +E LD+PG++ +
Sbjct: 123 VRAMIVGIPNVGKSKFINKFVNKNKAKVGNTPGFTRGKQWIKINDKIELLDTPGVLWPKF 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVA 303
D+ A LAI I + + +V
Sbjct: 183 EDENIAYNLAITGSIKDNVLPIEEVV 208
>gi|15675137|ref|NP_269311.1| ribosomal biogenesis GTPase [Streptococcus pyogenes SF370]
gi|71910695|ref|YP_282245.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS5005]
gi|410680553|ref|YP_006932955.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pyogenes A20]
gi|13622297|gb|AAK34032.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71853477|gb|AAZ51500.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
gi|395453930|dbj|BAM30269.1| ribosomal biogenesis GTPase [Streptococcus pyogenes M1 476]
gi|409693142|gb|AFV38002.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
pyogenes A20]
Length = 282
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|50914224|ref|YP_060196.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS10394]
gi|50903298|gb|AAT87013.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
Length = 282
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|77408070|ref|ZP_00784818.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|410594536|ref|YP_006951263.1| ribosome biogenesis GTPase A [Streptococcus agalactiae SA20-06]
gi|421147340|ref|ZP_15607030.1| GTPase YlqF [Streptococcus agalactiae GB00112]
gi|421532850|ref|ZP_15979194.1| GTPase YlqF [Streptococcus agalactiae STIR-CD-17]
gi|77173335|gb|EAO76456.1| GTP-binding protein [Streptococcus agalactiae COH1]
gi|401686018|gb|EJS82008.1| GTPase YlqF [Streptococcus agalactiae GB00112]
gi|403641862|gb|EJZ02773.1| GTPase YlqF [Streptococcus agalactiae STIR-CD-17]
gi|410518175|gb|AFV72319.1| Ribosome biogenesis GTPase A [Streptococcus agalactiae SA20-06]
Length = 283
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ QG K + N + K++ +AK L SD K R +G+ +R
Sbjct: 64 ADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|402312857|ref|ZP_10831780.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium ICM7]
gi|400367433|gb|EJP20449.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium ICM7]
Length = 279
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 122/209 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ + D +KL+D++IE+ DAR P +T +P + + N+ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMSDAIKLVDIIIEMTDARAPEATRNPEIMELGSNKSRIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N WA+++ +QG + +F + + G L + + ++ D + +G+ R VR
Sbjct: 63 SDESANNRWASHYKEQGYECMFMDSRKKNGVNVLIKAIENVSKDKRERDAKRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+LIN + R M +PGVT+ +W++ +E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTLINSVSGRAMAKTGNKPGVTKGNQWIKLKGQIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
+ +A I + D+ ++ L++
Sbjct: 183 ENIGEMIAFIGSINDMIIDIRELGLELIK 211
>gi|333897176|ref|YP_004471050.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112441|gb|AEF17378.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 278
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 124/210 (59%), Gaps = 2/210 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+AKT++ +++ LK++D+V E+ DARIP S+ +PL+D + N+KRI++LN+ D+
Sbjct: 3 QWYPGHMAKTKRLIEENLKIVDIVYELLDARIPRSSRNPLIDDLVKNKKRIILLNKSDLA 62
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ W YF +G I N + L SD+ K+R KG+ + +RA
Sbjct: 63 DLEVNKMWNDYFNLKGHVSININSLDSKCIQSIYELTLKECSDIIDKKRQKGIKAK-LRA 121
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
IVG PNVGKS+LIN L K + +PGVT+ +W++ + LD+PGI+ + D+
Sbjct: 122 MIVGIPNVGKSTLINSLTKTKNAKTGNKPGVTKSKQWIKTPY-FDLLDTPGILWPKFEDE 180
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA+ I + + ++A +L+ +L
Sbjct: 181 HVGMMLALTSAIKDELLNHEELAYLLLDIL 210
>gi|302874783|ref|YP_003843416.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
cellulovorans 743B]
gi|307690601|ref|ZP_07633047.1| ribosomal biogenesis GTPase [Clostridium cellulovorans 743B]
gi|302577640|gb|ADL51652.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
cellulovorans 743B]
Length = 285
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 121/214 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH++KT +E+K+ LKL+DVVIE+RDARI S+ +P +D+ + RI++LN+ D+
Sbjct: 5 INWFPGHMSKTRREIKENLKLVDVVIEIRDARIIKSSANPDIDEITKGKPRIILLNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + TK++ N G G + L + + + ++KGL+ +
Sbjct: 65 SDERCTKEWIDNLSNEETKILTVNCLNGQGIRNIKPAIDQLLKEKHDRMKAKGLINIKTK 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ INR+ + RPGVT+ +W+R +E LD+PG++ + D
Sbjct: 125 AMVVGIPNVGKSTFINRMAGSSIAKTGDRPGVTKSKQWIRTKIGIELLDTPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ LA I + DV ++A L++ L I
Sbjct: 185 NRVGLNLAFTGAIKDEIMDVEELALKLIEDLMVI 218
>gi|237742200|ref|ZP_04572681.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|256845473|ref|ZP_05550931.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
3_1_36A2]
gi|294785221|ref|ZP_06750509.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
3_1_27]
gi|229429848|gb|EEO40060.1| GTP-binding protein [Fusobacterium sp. 4_1_13]
gi|256719032|gb|EEU32587.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
3_1_36A2]
gi|294486935|gb|EFG34297.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
3_1_27]
Length = 292
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLAR 312
+ + I LAI I + + DVA ++L +ML +
Sbjct: 182 WPKFESETVGINLAITGAIRDEILPIEDVACSLLKKMLEQ 221
>gi|339624739|ref|ZP_08660528.1| GTP-binding protein YlqF [Fructobacillus fructosus KCTC 3544]
Length = 281
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 122/204 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK + +++ L L+D+V E+ DAR+PLS+ +P +D+ + + R+LVL + D+
Sbjct: 5 IQWYPGHMAKAFRLMRENLSLVDIVFELVDARLPLSSRNPEVDKLIEKKPRLLVLTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ +AW YF +QG V+ + + +++ AK + + + +KG+ R +R
Sbjct: 65 ADPKETSAWKAYFERQGLAVVVLDTRGPKTAQVMTKAAKQVLKEQLAAQEAKGIKNRPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PNVGKS+L+N L+++ + A +PGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 VMLAGIPNVGKSTLLNHLVQKNVAITANKPGVTKKVAWLKTATGLEILDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q +LA+ + + + D A
Sbjct: 185 QKIGQRLALTGAVKDTIFAKDDAA 208
>gi|76787382|ref|YP_329729.1| ribosomal biogenesis GTPase [Streptococcus agalactiae A909]
gi|77407003|ref|ZP_00784017.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|406709474|ref|YP_006764200.1| ribosomal biogenesis GTPase [Streptococcus agalactiae GD201008-001]
gi|417005257|ref|ZP_11943850.1| ribosomal biogenesis GTPase [Streptococcus agalactiae FSL S3-026]
gi|424049454|ref|ZP_17787005.1| GTPase YlqF [Streptococcus agalactiae ZQ0910]
gi|76562439|gb|ABA45023.1| GTP-binding protein [Streptococcus agalactiae A909]
gi|77174389|gb|EAO77244.1| GTP-binding protein [Streptococcus agalactiae H36B]
gi|341577070|gb|EGS27478.1| ribosomal biogenesis GTPase [Streptococcus agalactiae FSL S3-026]
gi|389649125|gb|EIM70610.1| GTPase YlqF [Streptococcus agalactiae ZQ0910]
gi|406650359|gb|AFS45760.1| ribosomal biogenesis GTPase [Streptococcus agalactiae GD201008-001]
Length = 283
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ QG K + N + K++ +AK L SD K R +G+ +R
Sbjct: 64 ADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIAKLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|21910353|ref|NP_664621.1| ribosomal biogenesis GTPase [Streptococcus pyogenes MGAS315]
gi|28895930|ref|NP_802280.1| ribosomal biogenesis GTPase [Streptococcus pyogenes SSI-1]
gi|21904550|gb|AAM79424.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
gi|28811180|dbj|BAC64113.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
Length = 282
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|322391938|ref|ZP_08065402.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus peroris
ATCC 700780]
gi|321145164|gb|EFX40561.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus peroris
ATCC 700780]
Length = 283
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ R+L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTVLVDARLPLSSQNPMLTKIIGDKPRLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F QG + + N + + ++ AK L + +++ +G+ +R
Sbjct: 64 ADPVLTKEWRQHFESQGIQTLAINSKEQITVKVVTDAAKKLMVEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W + KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWFKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|418070623|ref|ZP_12707898.1| GTP-binding protein [Lactobacillus rhamnosus R0011]
gi|357540043|gb|EHJ24060.1| GTP-binding protein [Lactobacillus rhamnosus R0011]
Length = 285
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 131/217 (60%), Gaps = 3/217 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+++EV DAR P S+ +P++D+ +G++ R+++LN++D+
Sbjct: 3 IQWFPGHMAKARKQVQEKIKQVDLILEVVDARTPESSRNPMLDELVGDKPRLIILNKQDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ QG I + Q ++ + A L ++ +++++G+ ++
Sbjct: 63 ADPVLTNEWVRYYQTQGFAAIAIDAQHAKRLQQIPQAAAKLMAEKIARKKARGIRNPMIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+++ + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 123 AMCIGIPNVGKSTVLNRLVRKNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAI--LVQMLARIP 314
Q ++LA I + + DV + L +A P
Sbjct: 183 QTIGMRLAFTGAIADAVFQ-EDVVGLYGLAYFMAHYP 218
>gi|386586047|ref|YP_006082449.1| GTP1/OBG protein [Streptococcus suis D12]
gi|353738193|gb|AER19201.1| GTP1/OBG protein [Streptococcus suis D12]
Length = 283
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK+L + + R +G+ +R
Sbjct: 64 ADPVRTKEWQSYFEGQGIRTLAINSKEQSTVKKVTDAAKSLMKEKIERLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|94544013|gb|ABF34061.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
Length = 282
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|25011102|ref|NP_735497.1| ribosomal biogenesis GTPase [Streptococcus agalactiae NEM316]
gi|76798265|ref|ZP_00780513.1| GTP-binding protein [Streptococcus agalactiae 18RS21]
gi|77410513|ref|ZP_00786874.1| GTP-binding protein [Streptococcus agalactiae CJB111]
gi|77413767|ref|ZP_00789948.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|23095501|emb|CAD46707.1| Unknown [Streptococcus agalactiae NEM316]
gi|76586376|gb|EAO62886.1| GTP-binding protein [Streptococcus agalactiae 18RS21]
gi|77160196|gb|EAO71326.1| GTP-binding protein [Streptococcus agalactiae 515]
gi|77163461|gb|EAO74411.1| GTP-binding protein [Streptococcus agalactiae CJB111]
Length = 283
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ QG K + N + K++ +AK L SD K R +G+ +R
Sbjct: 64 ADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIAKLRGRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|365904024|ref|ZP_09441783.1| GTP-binding protein, GTPase [Lactobacillus versmoldensis KCTC 3814]
Length = 284
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 127/211 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +++D+LK++D+V+E+ DAR+P S+ +P+++Q + +K I++LN+ D+
Sbjct: 3 LQWYPGHMNKAKNQVQDRLKVVDIVLEIVDARLPYSSRNPVLEQIINQKKHIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W + ++GT I + + KL+ L ++ SD K G+ +R
Sbjct: 63 ADPKLTSDWILSYQQEGTAAIEVDAKHDTKLTKLNNLIRSELSDKIAKYERNGVKNFQIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++N+++ +++ +PGVT+ W++ ++ LD+PGI+ +ISD
Sbjct: 123 AMCIGIPNVGKSTILNKMVGKKVAVTGNKPGVTKNQNWLKTDYGIDLLDTPGILWPKISD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+KLA+ I ++ Y DVA + L
Sbjct: 183 PKVGMKLALSGAIKDKIYPPDDVAIYALDFL 213
>gi|418010847|ref|ZP_12650618.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei Lc-10]
gi|410553426|gb|EKQ27429.1| 50S ribosomal subunit maturation GTPase [Lactobacillus casei Lc-10]
Length = 286
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 124/198 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+V+EV DAR P S+ + ++D+ + ++ RI+VLN++D+
Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNLMLDELVADKPRIMVLNKQDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A AW Y+ QG I + Q ++ +LA L ++ +++++G+ ++
Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL++R + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 184 QTIGMRLAFTGAIADAVF 201
>gi|422338234|ref|ZP_16419194.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355372872|gb|EHG20211.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 289
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 2/217 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + I LAI I + + DVA+ L++ +
Sbjct: 182 WPKFESETVGINLAITGAIRDEILPIEDVASSLLRKM 218
>gi|406026980|ref|YP_006725812.1| GTP-binding protein [Lactobacillus buchneri CD034]
gi|405125469|gb|AFS00230.1| GTP-binding protein [Lactobacillus buchneri CD034]
Length = 290
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 116/204 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++ ++ L L+DVV EV DARIPL++ +P + + ++ + ++ + D+
Sbjct: 5 IQWFPGHMAKAIRQFEENLSLVDVVFEVIDARIPLTSQNPEIRRISADKPHLYIMTKRDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
NAW YFA+ I + + G + + + D + + KG+ R +R
Sbjct: 65 ADPQLTNAWLQYFAEHNQPAIAIDAKTKFGINNVISVISPILRDKLQREQDKGMKKRPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+++NRL+ RR RPG+T+ +W++ LE LD+PGI+ + S
Sbjct: 125 AISVGVPNVGKSTVLNRLVNRRAAQVGNRPGLTKGQQWLKSNDKLELLDTPGILWPKFSS 184
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q A KLA+ I E Y D+A
Sbjct: 185 QEVADKLALTGAIKESVYASDDIA 208
>gi|110799613|ref|YP_696394.1| ribosomal biogenesis GTPase [Clostridium perfringens ATCC 13124]
gi|168210660|ref|ZP_02636285.1| GTP-binding protein [Clostridium perfringens B str. ATCC 3626]
gi|110674260|gb|ABG83247.1| GTP-binding protein [Clostridium perfringens ATCC 13124]
gi|170711301|gb|EDT23483.1| GTP-binding protein [Clostridium perfringens B str. ATCC 3626]
Length = 281
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+++ LKL+D VIE+RDARIP S+ +P +D + R+++LN+ D+
Sbjct: 3 INWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW T V+ N G G + L D + + ++KGL R
Sbjct: 63 TDPKVTKAWKDSLTNDETIVLEVNALKGEGLNAIKPALLKLLKDKHDRLKAKGLAKITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ K + RPGVT+ +W++ +E +D+PG++ + D
Sbjct: 123 AMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D ++A LV+ L
Sbjct: 183 EIVGLNLAFTGAIKDEIMDTEELALKLVERL 213
>gi|304316920|ref|YP_003852065.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778422|gb|ADL68981.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 278
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+AKT++ +++ LK++D+V E+ DARIP S+ +PL+D+ + N+KR+++LN+ D+
Sbjct: 3 QWYPGHMAKTKRLIEENLKIVDIVYELIDARIPKSSRNPLIDELVKNKKRLILLNKADLS 62
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
A W YF K G + N ++ L S++ ++R KG+ + +RA
Sbjct: 63 DSAVNKMWNEYFKKLGIASLNINSLNSSSIKEIYELTLKECSNIIDRKRQKGIKAK-LRA 121
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
IVG PNVGKS+LIN L K + +PGVT+ +W+R + LD+PGI+ + D+
Sbjct: 122 MIVGIPNVGKSTLINSLSKTKSAKTGNKPGVTKAKQWIRTPY-FDLLDTPGILWPKFEDE 180
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
I LA+ I + + ++A L+++L +
Sbjct: 181 HVGIMLALTAAIKDELLNHEELAFSLLKILKQ 212
>gi|339480648|ref|ZP_08656307.1| GTP-binding protein YlqF [Leuconostoc pseudomesenteroides KCTC
3652]
Length = 281
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ DARIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDARIPESSRNPEIDKLIGQKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW F +QG V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRAWKKRFEEQGYTVLVLDTRDPRTPQLVTKAARRAVEAKKEAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGVPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KL++ + + + D A L+
Sbjct: 185 QTIGMKLSLTGAVKDTIFAKDDAALFLIAFF 215
>gi|254302953|ref|ZP_04970311.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323145|gb|EDK88395.1| possible GTP-binding protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 289
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 2/217 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + I LAI I + + DVA+ L++ +
Sbjct: 182 WPKFESETVGINLAITGAIRDEILPIEDVASSLLRKM 218
>gi|421879212|ref|ZP_16310684.1| GTP-binding protein RbgA [Leuconostoc citreum LBAE C11]
gi|390446880|emb|CCF26804.1| GTP-binding protein RbgA [Leuconostoc citreum LBAE C11]
Length = 279
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DV E+ DARIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVAFELVDARIPESSRNPEVDKLIGGKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F G V+ N + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRQWKAKFESDGHTVLVLNTRDPRTPQLVTKAARRAVEAKTAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +KLA+ + + + D A L+
Sbjct: 185 QAIGMKLALTGAVKDTIFSKDDAALFLISFF 215
>gi|357238989|ref|ZP_09126325.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
ictaluri 707-05]
gi|356752711|gb|EHI69836.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
ictaluri 707-05]
Length = 282
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W YF QG K + N + K++ A++L SD + R +G+ +R
Sbjct: 64 ADNARTKEWKKYFEAQGIKTLAINSKEQATVKKVTEAAQSLMSDKLDRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKVLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|199599537|ref|ZP_03212925.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|258508403|ref|YP_003171154.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|385828073|ref|YP_005865845.1| putative GTPase [Lactobacillus rhamnosus GG]
gi|199589578|gb|EDY97696.1| Predicted GTPase [Lactobacillus rhamnosus HN001]
gi|257148330|emb|CAR87303.1| GTP-binding protein [Lactobacillus rhamnosus GG]
gi|259649718|dbj|BAI41880.1| putative GTPase [Lactobacillus rhamnosus GG]
Length = 285
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 124/198 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK K++++++K +D+++EV DAR P S+ +P++D+ +G++ R+++LN++D+
Sbjct: 3 IQWFPGHMAKARKQVQEKIKQVDLILEVVDARTPESSRNPMLDELVGDKPRLIILNKQDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W Y+ QG I + Q ++ + A L ++ +++++G+ ++
Sbjct: 63 ADPVLTNEWVRYYQTQGFAAIAIDAQHAKRLQQIPQAAAKLMAEKIARKKARGIRNPMIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+++ + +PGVT+ +W++ + + LD+PGI+ + +
Sbjct: 123 AMCIGIPNVGKSTVLNRLVRKNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 182
Query: 280 QAAAIKLAICDDIGERSY 297
Q ++LA I + +
Sbjct: 183 QTIGMRLAFTGAIADAVF 200
>gi|319939094|ref|ZP_08013458.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
gi|319812144|gb|EFW08410.1| GTP-binding protein [Streptococcus anginosus 1_2_62CV]
Length = 283
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G + ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGEKPKLLILNKGDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADSDLTKEWRKYFESQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ ++LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNRNLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EKVALKLALT 193
>gi|386588114|ref|YP_006084515.1| GTP1/OBG protein [Streptococcus suis A7]
gi|354985275|gb|AER44173.1| GTP1/OBG protein [Streptococcus suis A7]
Length = 283
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +YF QG + + N + K++ AK+L + + R +G+ +R
Sbjct: 64 ADPVCTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAKSLMKEKIERLRQRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
Q +KLA+ I ++
Sbjct: 184 QEVGLKLALTGAIKDQ 199
>gi|326693009|ref|ZP_08230014.1| GTP-binding protein YlqF [Leuconostoc argentinum KCTC 3773]
gi|339449857|ref|ZP_08653227.1| GTP-binding protein YlqF [Leuconostoc lactis KCTC 3528]
Length = 281
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ DARIP S+ +P +D+ +G++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDARIPESSRNPEVDKLIGSKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F QG V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPDQTRAWKQHFEVQGHAVLVLDTRDPRTPQLVTKAARRAVKAKKAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 ALIAGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KLA+ + + + D L+
Sbjct: 185 QTVGLKLALTGAVKDTIFAKDDAVLFLLDFF 215
>gi|237744258|ref|ZP_04574739.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|421527044|ref|ZP_15973649.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
gi|229431487|gb|EEO41699.1| GTP-binding protein [Fusobacterium sp. 7_1]
gi|402256773|gb|EJU07250.1| GTP-binding protein [Fusobacterium nucleatum ChDC F128]
Length = 289
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLAR 312
+ + I LAI I + + DVA ++L +ML +
Sbjct: 182 WPKFESETVGINLAITGAIRDEILPIEDVACSLLRKMLEQ 221
>gi|335029924|ref|ZP_08523425.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis SK1076]
gi|334267789|gb|EGL86242.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
infantis SK1076]
Length = 283
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ +L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPSLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F QG + + N + + ++ AK L +D +++ +G+ +R
Sbjct: 64 ADPTLTKEWRQHFEAQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ A+KLA+ I ++
Sbjct: 184 ETVALKLALTGAIKDQ 199
>gi|418962640|ref|ZP_13514494.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
anginosus subsp. whileyi CCUG 39159]
gi|383345175|gb|EID23308.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
anginosus subsp. whileyi CCUG 39159]
Length = 283
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 118/190 (62%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G + ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGEKPKLLILNKGDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADSDLTKEWRRYFESQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ ++LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNRNLEILDTPGILWPKFED 183
Query: 280 QAAAIKLAIC 289
+ A+KLA+
Sbjct: 184 EKVALKLALT 193
>gi|404483942|ref|ZP_11019157.1| ribosome biogenesis GTP-binding protein YlqF [Clostridiales
bacterium OBRC5-5]
gi|404342954|gb|EJZ69323.1| ribosome biogenesis GTP-binding protein YlqF [Clostridiales
bacterium OBRC5-5]
Length = 279
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 122/209 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ + D +KL+D++IE+ DAR P +T +P + + N+ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMSDAIKLVDIIIEMTDARAPEATRNPEIMELGSNKSRIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N WA+++ +QG + +F + + G L + + ++ + + +G+ R VR
Sbjct: 63 SDESANNRWASHYKEQGYECMFMDSRKKNGVNALIKAIENVSKEKRERDAKRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+LIN + R M +PGVT+ +W++ +E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTLINSVSGRAMAKTGNKPGVTKGNQWIKLKGQIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
+ +A I + D+ ++ L++
Sbjct: 183 ENIGEMIAFIGSINDMIIDIRELGLELIK 211
>gi|424787770|ref|ZP_18214534.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius BA1]
gi|422113524|gb|EKU17262.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius BA1]
Length = 283
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 122/204 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+P S+ +P++ + +G++ ++LVLN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPFSSQNPMLTKIVGDKPKLLVLNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF QG K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADAHLTKEWRRYFENQGIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL ++ +PGVT+ +W++ KDLE LD+PGI+ + +
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGEKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFEE 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
A+KLA+ I + + +VA
Sbjct: 184 ADIALKLALTGAIKDDLLPMDEVA 207
>gi|377556018|ref|ZP_09785741.1| GTP-binding protein [Lactobacillus gastricus PS3]
gi|376168756|gb|EHS87484.1| GTP-binding protein [Lactobacillus gastricus PS3]
Length = 290
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DAR+P S+ +P +D G++ R+L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDLVFELVDARVPYSSQNPEVDLAAGDKPRLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +F QG V+ + + K++ AK + +D +KG+ RA++
Sbjct: 64 ADPEVTKEWLAFFKNQGQPVLALDSREQQVAKKVTNAAKKVLADKMANEAAKGMQKRAIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+ + + A RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVHKNVAATANRPGVTTGQQWLRSSAELELLDTPGVLWPKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
LA+ I + Y DVA + L
Sbjct: 184 TKQGTMLALSGAIKDSLYPKDDVAIFALDYL 214
>gi|383480029|ref|YP_005388923.1| 50S ribosomal biogenesis GTPase protein RbgA [Streptococcus
pyogenes MGAS15252]
gi|383493945|ref|YP_005411621.1| 50S ribosomal biogenesis GTPase protein RbgA [Streptococcus
pyogenes MGAS1882]
gi|378928019|gb|AFC66225.1| 50S ribosomal biogenesis GTPase protein RbgA [Streptococcus
pyogenes MGAS15252]
gi|378929673|gb|AFC68090.1| 50S ribosomal biogenesis GTPase protein RbgA [Streptococcus
pyogenes MGAS1882]
Length = 282
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ +K L +D + R +G+ +R
Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEASKELMADKIQRLRERGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|374582895|ref|ZP_09655989.1| ribosome biogenesis GTP-binding protein YlqF [Desulfosporosinus
youngiae DSM 17734]
gi|374418977|gb|EHQ91412.1| ribosome biogenesis GTP-binding protein YlqF [Desulfosporosinus
youngiae DSM 17734]
Length = 276
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++KT + L +QLK +DVV+E+ DARIP S+ +P++ + LGN+ R+L+LN+ D+
Sbjct: 3 IQWFPGHMSKTRRLLLEQLKWVDVVLELADARIPASSRNPMLHKLLGNKARLLLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y K+ + V + G+G ++ + + K+ KG+ P+ +R
Sbjct: 63 ADSNWTSKWLKYL-KESSPVYAVSATTGVGIKQIVPELERMVLAKQAKQAQKGIRPQMIR 121
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PN+GKSSLIN+L +PGVTR +WVR + +E LD+PG++ + D
Sbjct: 122 VMIVGIPNIGKSSLINQLTGGAQAKVGNKPGVTRGNQWVRIHERVELLDTPGMLWPKFDD 181
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
KLA I + +D+ +++ ++ L
Sbjct: 182 LDVGRKLAALGAIKDDVFDIEELSIWIIDWL 212
>gi|315038208|ref|YP_004031776.1| GTP binding protein [Lactobacillus amylovorus GRL 1112]
gi|325956662|ref|YP_004292074.1| GTP binding protein [Lactobacillus acidophilus 30SC]
gi|385817547|ref|YP_005853937.1| GTP binding protein [Lactobacillus amylovorus GRL1118]
gi|312276341|gb|ADQ58981.1| GTP binding protein [Lactobacillus amylovorus GRL 1112]
gi|325333227|gb|ADZ07135.1| GTP binding protein [Lactobacillus acidophilus 30SC]
gi|327183485|gb|AEA31932.1| GTP binding protein [Lactobacillus amylovorus GRL1118]
Length = 279
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D++ L+DV++EV DARIP ++ +P++++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKMGLIDVLVEVLDARIPEASRNPMIEELVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A WA V+ + KL L K AS+ K ++G +R
Sbjct: 64 ADPALTKEWAKKLNGPDKYVLALDSLHNTNMQKLISLVKKAASEKTKKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ KW++ +++ LD+PGI+ + SD
Sbjct: 124 IALTGIPNCGKSTVINRLVGRNVAEVGNKPGVTKGQKWLKTSANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALYVLKNL 214
>gi|408401652|ref|YP_006859615.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
gi|407967880|dbj|BAM61118.1| GTP-binding protein [Streptococcus dysgalactiae subsp. equisimilis
RE378]
Length = 295
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 17 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 76
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG K + N + K++ AK L +D + R +G+ +R
Sbjct: 77 ADPTRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 136
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 137 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 196
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 197 ELVGLKLALTGAIKDQ 212
>gi|375091720|ref|ZP_09738008.1| ribosome biogenesis GTP-binding protein YlqF [Helcococcus kunzii
ATCC 51366]
gi|374562607|gb|EHR33934.1| ribosome biogenesis GTP-binding protein YlqF [Helcococcus kunzii
ATCC 51366]
Length = 283
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 122/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ K+ ++++ LKL+D+V E+ D+RIP+S+ +P++D+ LG+ RI++LN+ DM
Sbjct: 3 INWYPGHMKKSIDKIRESLKLVDIVAEIVDSRIPISSRNPVIDKILGDFPRIIILNKVDM 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ + W YF ++ VI N T L ++A+ + KR+ K + ++
Sbjct: 63 ANPKETRKWIKYFNEKNISVIEFNSTKDKKTNDLYKIARKTLEPLFAKRKEKQIKDETIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKS+ IN + +R+ RPGVTR+ +W+R +L LD+PG++ ++
Sbjct: 123 MMVVGIPNVGKSTFINNVSQRKGTKVGNRPGVTRMNQWIRTSSNLLLLDTPGVLWPKLDL 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
LA I + ++ D+ L++ L
Sbjct: 183 PDGGKNLAFTGAIKDEILEIEDLCFELIKKL 213
>gi|339301523|ref|ZP_08650621.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
agalactiae ATCC 13813]
gi|319744986|gb|EFV97314.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
agalactiae ATCC 13813]
Length = 283
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 121/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ QG K + N + K++ +AK L SD K R +G+ +R
Sbjct: 64 ADPIRTKEWRDFYESQGLKTLAINSKEQSIVKKVTDIAKILMSDKIAKLRGRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|260494157|ref|ZP_05814288.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
3_1_33]
gi|336401175|ref|ZP_08581947.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
21_1A]
gi|336418578|ref|ZP_08598852.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
11_3_2]
gi|260198303|gb|EEW95819.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
3_1_33]
gi|336161532|gb|EGN64533.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
21_1A]
gi|336164515|gb|EGN67420.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
11_3_2]
Length = 289
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRVKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLAR 312
+ + I LAI I + + DVA ++L +ML +
Sbjct: 182 WPKFESETVGINLAITGAIRDEILPIEDVACSLLRKMLQQ 221
>gi|78043127|ref|YP_360259.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77995242|gb|ABB14141.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
Length = 276
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 125/216 (57%), Gaps = 8/216 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+K L Q+KL+DVV+E+RDARIPLS+ +P +++ N+ RI++ N++D
Sbjct: 2 INWYPGHMFKTKKALLAQVKLVDVVLEIRDARIPLSSKNPDIEEICKNKPRIVLFNKKD- 60
Query: 160 ISMADRNAWATYFAK----QGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+AD K +G + G ++ + + + K KGL P
Sbjct: 61 --LADVEKTEEILKKLPWPEGVYYCLVESKATGGLKEVWNIIEKVYGQYKEKWSGKGLRP 118
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R +R +VG PNVGKS++INRLLKR + A +PGVTR ++W++ LE +D+PG++
Sbjct: 119 RPLRGMVVGIPNVGKSTVINRLLKRSVKTGA-KPGVTRGVQWIKLSDKLELMDTPGVLWP 177
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
++ D +KL I + V +VA L+++L
Sbjct: 178 KLGDMEVGLKLGATGSISDEVLPVIEVANWLLKILC 213
>gi|423136942|ref|ZP_17124585.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
nucleatum subsp. animalis F0419]
gi|371961009|gb|EHO78652.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 289
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRVKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLAR 312
+ + I LAI I + + DVA ++L +ML +
Sbjct: 182 WPKFESETVGINLAITGAIRDEILPIEDVACSLLRKMLQQ 221
>gi|390934868|ref|YP_006392373.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570369|gb|AFK86774.1| ribosome biogenesis GTP-binding protein YlqF [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 278
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 123/210 (58%), Gaps = 2/210 (0%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
QWYPGH+AKT++ +++ LK++DVV E+ DARIP S+ +PL+D + N+KRI++LN+ D+
Sbjct: 3 QWYPGHMAKTKRLIEENLKIVDVVYELLDARIPKSSRNPLIDDLVKNKKRIILLNKSDLA 62
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
+ W YF +G + N + L SD+ K+R KG+ + +RA
Sbjct: 63 DLEVNKMWNDYFNLKGHVSLNINSLDSRCIQSIYELTLKECSDIIDKKRQKGIKAK-LRA 121
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
IVG PNVGKS+LIN L K + +PGVT+ +W++ + LD+PGI+ + D+
Sbjct: 122 MIVGIPNVGKSTLINSLTKTKNAKTGNKPGVTKSKQWIKTPY-FDLLDTPGILWPKFEDE 180
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQML 310
I LA+ I + + ++A L+ +L
Sbjct: 181 HVGIMLALTSAIKDELLNHEELAYSLLDIL 210
>gi|310779497|ref|YP_003967830.1| ribosome biogenesis GTP-binding protein YlqF [Ilyobacter polytropus
DSM 2926]
gi|309748820|gb|ADO83482.1| ribosome biogenesis GTP-binding protein YlqF [Ilyobacter polytropus
DSM 2926]
Length = 297
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 123/213 (57%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+ +++ +K++D+V+E+ DARIPLS+ +P + ++ N+KRI++LN+ D+
Sbjct: 6 INWYPGHMKKTKDMIQENMKIIDIVLEIVDARIPLSSKNPDIVKFAKNKKRIIILNKADL 65
Query: 160 ISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
++ D W YF K +VI + + G KL + + L+ + K KGL
Sbjct: 66 VNKEDLKVWKDYFIKNNFAEEVIELSAETGFNVKKLFAIIEKLSKEKKEKMMKKGLRTVN 125
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
R + G PNVGKS LINR++ ++ +PG TR +WVR + LE LD+PGI+ +
Sbjct: 126 TRLMVAGIPNVGKSRLINRIVGKKSTGVGNKPGFTRGKQWVRIKEGLELLDTPGILWPKF 185
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LAI I + V +VA L++ +
Sbjct: 186 ENDEVGYSLAIAGAIKDEVIPVEEVAYKLIEKM 218
>gi|227893502|ref|ZP_04011307.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
gi|227864672|gb|EEJ72093.1| GTP-binding protein [Lactobacillus ultunensis DSM 16047]
Length = 279
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +P++++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLNLIDVLVEVLDARIPESSRNPMIEELVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
WA + V+ + KL L K +++ K ++G +R
Sbjct: 64 ADPNLTKEWAKKLSGANKYVLALDSLHNTNMQKLISLVKKASAEKTKKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W++ +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTVINRLVGRNVAEVGNKPGVTKGQRWLKTSANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALFVLENL 214
>gi|309775666|ref|ZP_07670665.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 3_1_53]
gi|308916572|gb|EFP62313.1| ribosome biogenesis GTP-binding protein YlqF [Erysipelotrichaceae
bacterium 3_1_53]
Length = 288
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 127/205 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++E++++L ++D+VIE+RDARIP ++ +P++++ N+ R++VL+++D
Sbjct: 8 IQWFPGHMTKAKREMQEKLSMVDMVIELRDARIPNASKNPMIEELCQNKPRLIVLSKKDK 67
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W + T+V+ + K+ ++ L + + +G+ PRA+R
Sbjct: 68 ADAAATALWCKQLRNETTRVVALDILKENIIPKIVEQSQLLMQAKIERMKRRGIRPRAIR 127
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ INR+ K+++ RPGVTR L+W + ++LE LD+PG++ + D
Sbjct: 128 AMVVGVPNVGKSTFINRISKKKVAVTGNRPGVTRALQWSKVNQNLELLDTPGVLWPKFED 187
Query: 280 QAAAIKLAICDDIGERSYDVADVAA 304
+ + LAI I + + ++AA
Sbjct: 188 ETVGVLLAITGAIRDEILPLEEIAA 212
>gi|448821358|ref|YP_007414520.1| Ribosome biogenesis GTPase A [Lactobacillus plantarum ZJ316]
gi|448274855|gb|AGE39374.1| Ribosome biogenesis GTPase A [Lactobacillus plantarum ZJ316]
Length = 284
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 119/204 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++D L L+D+V E+ DARIP+++ +P +++ + + +L++ ++D+
Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTVQQKPHLLIMTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG I + + ++++ A + +D K ++G+ R +R
Sbjct: 64 ADPQATADWVKYYEDQGQVAIAVDSRSRTIGKQMTQAASDMLADKLAKIAARGITNRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N ++ +++ RPGVT+ +W++ LE LD+PGI+ + D
Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASNKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I E Y DVA
Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVA 207
>gi|380032648|ref|YP_004889639.1| ribosome biogenesis GTP-binding protein [Lactobacillus plantarum
WCFS1]
gi|418275408|ref|ZP_12890731.1| ribosome biogenesis GTP-binding protein [Lactobacillus plantarum
subsp. plantarum NC8]
gi|342241891|emb|CCC79125.1| ribosome biogenesis GTP-binding protein [Lactobacillus plantarum
WCFS1]
gi|376008959|gb|EHS82288.1| ribosome biogenesis GTP-binding protein [Lactobacillus plantarum
subsp. plantarum NC8]
Length = 284
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 119/204 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++D L L+D+V E+ DARIP+++ +P +++ + + +L++ ++D+
Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTVQQKPHLLIMTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG I + + ++++ A + +D K ++G+ R +R
Sbjct: 64 ADPQATADWVKYYEDQGQVAIAVDSRSRTIGKQMTQAASDMLADKLAKIAARGITNRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N ++ +++ RPGVT+ +W++ LE LD+PGI+ + D
Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASNKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I E Y DVA
Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVA 207
>gi|169342657|ref|ZP_02863699.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
gi|169299163|gb|EDS81233.1| GTP-binding protein [Clostridium perfringens C str. JGS1495]
Length = 281
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+++ LKL+D VIE+RDARIP S+ +P +D + R+++LN+ D+
Sbjct: 3 INWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW T V+ N G G + L + + + ++KGL R
Sbjct: 63 TDPKVTKAWKNSLTNDETIVLEVNALKGEGLNAIKPALLKLLKEKHDRLKAKGLAKITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ K + RPGVT+ +W++ +E +D+PG++ + D
Sbjct: 123 AMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D ++A LV+ L
Sbjct: 183 EIVGLNLAFTGAIKDEIMDTEELALKLVERL 213
>gi|296110321|ref|YP_003620702.1| GTPase [Leuconostoc kimchii IMSNU 11154]
gi|339490525|ref|YP_004705030.1| GTPase [Leuconostoc sp. C2]
gi|295831852|gb|ADG39733.1| GTPase [Leuconostoc kimchii IMSNU 11154]
gi|338852197|gb|AEJ30407.1| GTPase [Leuconostoc sp. C2]
Length = 284
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 124/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ DARIP S+ +P +++ + ++ +L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDARIPESSRNPEVNKLIASKPCLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +F +G V+ + + +++ A+ + + ++G+ + +R
Sbjct: 65 ADPEQIRAWKAHFEAEGHTVLVLDTRDPKTPQLVTKAARRAVASKKAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q +KLA+ + + +D D A L+ +
Sbjct: 185 QVIGMKLALTGAVKDTIFDKDDAALFLIDFFQK 217
>gi|300767457|ref|ZP_07077369.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308180668|ref|YP_003924796.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|300495276|gb|EFK30432.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308046159|gb|ADN98702.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 284
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 119/204 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++D L L+D+V E+ DARIP+++ +P +++ + + +L++ ++D+
Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTVQQKPHLLIMTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ QG I + + ++++ A + +D K ++G+ R +R
Sbjct: 64 ADPQATADWVKYYEDQGQVAIAVDSRSRTIGKQMTQAASDMLADKLAKIAARGITNRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N ++ +++ RPGVT+ +W++ LE LD+PGI+ + D
Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASNKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I E Y DVA
Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVA 207
>gi|253681828|ref|ZP_04862625.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium botulinum
D str. 1873]
gi|253561540|gb|EES90992.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium botulinum
D str. 1873]
Length = 280
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 118/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LK +D+VIE+RDARI S+ +P +D N+ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTRREIKENLKFVDIVIEIRDARIVKSSANPDIDDICKNKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + +V N G G + + L + + + R+KG++ R
Sbjct: 63 SEEKVTKEWIKKLSNEFIRVANVNCVTGKGLNSIKPMINDLLKEKHDRLRAKGVVNITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ + +PGVT+ +W++ +E LD+PG++ + D
Sbjct: 123 AMVVGIPNVGKSSFINKMARNNTAKVGDKPGVTKNKQWIKTKMGIELLDTPGVLWPKFQD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A L++ L
Sbjct: 183 EQVGLNLAFTGAIKDEIMDIETLAFKLIEKL 213
>gi|19704538|ref|NP_604100.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714822|gb|AAL95399.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 289
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLAR 312
+ + I LAI I + + DVA ++L +ML +
Sbjct: 182 WPKFESKTVGINLAITGAIRDEILPLEDVACSLLRKMLEQ 221
>gi|335429710|ref|ZP_08556608.1| GTPase YlqF [Haloplasma contractile SSD-17B]
gi|334889720|gb|EGM28005.1| GTPase YlqF [Haloplasma contractile SSD-17B]
Length = 295
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 125/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++++LKL+D++ E+RDARIP S+++P+M + N+ R+++LN+ M
Sbjct: 9 IQWFPGHMAKARRQVEEKLKLVDIIYELRDARIPYSSSNPMMGDIIKNKPRLILLNKAKM 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ G + + G K+ + ++ + D K++ KGL + ++
Sbjct: 69 ADEDKTEEWINYYKDNGIIALDIDSISGYNMPKIIKKSREVLKDQLEKQQQKGLKQQNIK 128
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I+G PNVGKS+ IN L KR++ RPGVT+ +W+ G L+ LD+PGI+ + +
Sbjct: 129 AMIIGIPNVGKSTFINTLAKRKVARTGDRPGVTKAQQWITVGNGLQLLDTPGILWPKFEE 188
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLAI I ++ + D+ + L +
Sbjct: 189 QKVGFKLAITGAIKDQILHLDDITIYALDFLKK 221
>gi|168207942|ref|ZP_02633947.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|168215357|ref|ZP_02640982.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
gi|170660759|gb|EDT13442.1| GTP-binding protein [Clostridium perfringens E str. JGS1987]
gi|170713263|gb|EDT25445.1| GTP-binding protein [Clostridium perfringens CPE str. F4969]
Length = 281
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+++ LKL+D VIE+RDARIP S+ +P +D + R+++LN+ D+
Sbjct: 3 INWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW T V+ N G G + L + + + ++KGL R
Sbjct: 63 TDPKVTKAWKESLTNDETIVLEVNALKGEGLNAIKPALLKLLKEKHDRLKAKGLAKITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ K + RPGVT+ +W++ +E +D+PG++ + D
Sbjct: 123 AMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D ++A LV+ L
Sbjct: 183 EIVGLNLAFTGAIKDEIMDTEELALKLVERL 213
>gi|325680801|ref|ZP_08160339.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus albus 8]
gi|324107581|gb|EGC01859.1| ribosome biogenesis GTP-binding protein YlqF [Ruminococcus albus 8]
Length = 297
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 118/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
VQW+PGH++KT + + LKL+D V+E+ DARIP S+ +P + + G++ R+++LN+ D
Sbjct: 7 VQWFPGHMSKTRRIMASNLKLVDAVVEITDARIPYSSRNPEIKKICGSKPRMVLLNKADS 66
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ KQG + ++ + G K + K L S+ K ++G+ R +R
Sbjct: 67 ADPDITSMWIEYYKKQGVPALATDCRSGRNVSKFYPMLKELLSEQIEKWDTRGMTGRPIR 126
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PNVGKSS INRL ++ RPGVTR +WV + E LD PG++ + D
Sbjct: 127 MMIVGIPNVGKSSFINRLAGAKLAKVEDRPGVTRGKQWVALDEGFELLDMPGVLWPKFDD 186
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +LA + + D +A L++ L
Sbjct: 187 KLVGERLAFTGAVKDVILDTEYLACRLLEYL 217
>gi|22537173|ref|NP_688024.1| ribosomal biogenesis GTPase [Streptococcus agalactiae 2603V/R]
gi|22534037|gb|AAM99896.1|AE014238_9 GTP-binding protein [Streptococcus agalactiae 2603V/R]
Length = 283
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 120/196 (61%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+PLS+ +P++ + +G++ ++++LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ QG K + N + K++ +AK L SD R +G+ +R
Sbjct: 64 ADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIANLRGRGIQKETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ K+LE LD+PGI+ + D
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGER 295
+ +KLA+ I ++
Sbjct: 184 ELVGLKLALTGAIKDQ 199
>gi|18310689|ref|NP_562623.1| ribosomal biogenesis GTPase [Clostridium perfringens str. 13]
gi|168216994|ref|ZP_02642619.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|422346378|ref|ZP_16427292.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
perfringens WAL-14572]
gi|422874628|ref|ZP_16921113.1| GTPase YlqF [Clostridium perfringens F262]
gi|18145370|dbj|BAB81413.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|182380861|gb|EDT78340.1| GTP-binding protein [Clostridium perfringens NCTC 8239]
gi|373225923|gb|EHP48250.1| ribosome biogenesis GTP-binding protein YlqF [Clostridium
perfringens WAL-14572]
gi|380304269|gb|EIA16558.1| GTPase YlqF [Clostridium perfringens F262]
Length = 281
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+++ LKL+D VIE+RDARIP S+ +P +D + R+++LN+ D+
Sbjct: 3 INWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW T V+ N G G + L + + + ++KGL R
Sbjct: 63 TDPKVTKAWKDSLTNDETIVLEVNALKGEGLNAIKPALLKLLKEKHDRLKAKGLAKITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ K + RPGVT+ +W++ +E +D+PG++ + D
Sbjct: 123 AMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D ++A LV+ L
Sbjct: 183 EIVGLNLAFTGAIKDEIMDTEELALKLVERL 213
>gi|110803463|ref|YP_698994.1| ribosomal biogenesis GTPase [Clostridium perfringens SM101]
gi|182625876|ref|ZP_02953642.1| GTP-binding protein [Clostridium perfringens D str. JGS1721]
gi|110683964|gb|ABG87334.1| GTP-binding protein [Clostridium perfringens SM101]
gi|177908910|gb|EDT71402.1| GTP-binding protein [Clostridium perfringens D str. JGS1721]
Length = 281
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 117/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++E+++ LKL+D VIE+RDARIP S+ +P +D + R+++LN+ D+
Sbjct: 3 INWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW T V+ N G G + L + + + ++KGL R
Sbjct: 63 TDPKVTKAWKDSLTNDETIVLEVNALKGEGLNAIKPALLKLLKEKHDRLKAKGLAKITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKS+ IN++ K + RPGVT+ +W++ +E +D+PG++ + D
Sbjct: 123 AMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D ++A LV+ L
Sbjct: 183 EIVGLNLAFTGAIKDEIMDTEELALKLVERL 213
>gi|421876612|ref|ZP_16308167.1| GTP-binding protein RbgA [Leuconostoc citreum LBAE C10]
gi|372557486|emb|CCF24287.1| GTP-binding protein RbgA [Leuconostoc citreum LBAE C10]
Length = 279
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DV E+ DARIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVAFELVDARIPESSRNPEVDKLIGGKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F G V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRQWKAKFESDGHTVLVLDTRDPRTPQLVTKAARRAVEAKTAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +KLA+ + + + D A L+
Sbjct: 185 QAIGMKLALTGAVKDTIFSKDDAALFLISFF 215
>gi|336395589|ref|ZP_08576988.1| putative GTP-binding protein [Lactobacillus farciminis KCTC 3681]
Length = 284
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 123/204 (60%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K + +++D+LKL+D+V+E+ DAR+P S+ +P+++Q + +K I++LN+ D+
Sbjct: 3 LQWYPGHMNKAKNQVQDRLKLVDIVLEIVDARLPFSSRNPVLEQIIDQKKHIIILNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F ++GT I + + G K+ + ++ S+ + + G+ ++
Sbjct: 63 ADPKITADWKLNFEQEGTNSIEIDAKHTKGMNKIKSMIRSELSEKIQRYENNGVQNYRIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+++NRL+ + + +PGVT+ W++ ++ LD+PGI+ +I D
Sbjct: 123 AMCIGIPNVGKSTILNRLVGKNVAVTGNKPGVTKNQNWLKTNIGIDLLDTPGILWPKIDD 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+KLA+ I ++ Y DVA
Sbjct: 183 PKVGMKLALSGAIKDKIYAPDDVA 206
>gi|333397988|ref|ZP_08479801.1| GTP-binding protein RbgA [Leuconostoc gelidum KCTC 3527]
gi|406599893|ref|YP_006745239.1| GTP-binding protein RbgA [Leuconostoc gelidum JB7]
gi|406371428|gb|AFS40353.1| GTP-binding protein RbgA [Leuconostoc gelidum JB7]
Length = 284
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 123/208 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DV+ E+ DARIP S+ +P +D+ +G++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVIFELVDARIPESSRNPEVDKLIGSKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW F +G V+ + + +++ A+ + + ++G+ + +R
Sbjct: 65 ADPEQIRAWKARFESEGHTVLVLDTRDPRTPQLVTKAARRAVASKKAAQIARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ L+ LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKIAWLKTPTKLDLLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILV 307
Q +KLA+ + + + D A L+
Sbjct: 185 QVIGMKLALTGAVKDTIFAKDDAALFLI 212
>gi|402834432|ref|ZP_10883034.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. CM52]
gi|402278050|gb|EJU27116.1| ribosome biogenesis GTP-binding protein YlqF [Selenomonas sp. CM52]
Length = 276
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 115/199 (57%)
Query: 114 LKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRNAWATYFA 173
+++ LKL+DVV+E+ DARIP ++ +P++ + +G++ R++ LN+ D+ W YF
Sbjct: 1 MEENLKLVDVVVELLDARIPAASANPMLREIVGDKPRVVALNKRDLADEKMTKCWLEYFR 60
Query: 174 KQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYPNVGKSSL 233
Q + + G G +L L + A + SKG+ R R I+G PNVGKSSL
Sbjct: 61 AQKLPAVALDSVTGKGMRELLALIEKAAKHRTERLVSKGVAARKARVMILGIPNVGKSSL 120
Query: 234 INRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKLAICDDIG 293
INRL A +PGVTR +W+R G D++ LD+PGI+ + D+A +KLA +
Sbjct: 121 INRLAGAAKAKTADKPGVTRAKQWIRIGADVDLLDTPGILWPKFEDRAVGLKLAFTGAVN 180
Query: 294 ERSYDVADVAAILVQMLAR 312
+ YD+ +VA +L+ L R
Sbjct: 181 DEIYDLENVAHLLLAALRR 199
>gi|399516927|ref|ZP_10758503.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Leuconostoc pseudomesenteroides 4882]
gi|398648181|emb|CCJ66530.1| 50S ribosomal subunit maturation GTPase RbgA (B. subtilis YlqF)
[Leuconostoc pseudomesenteroides 4882]
Length = 281
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DVV E+ D+RIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDSRIPESSRNPEIDKLIGQKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW F +QG V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRAWKKKFEEQGYTVLVLDTRDPRTPQLVTKAARRAVEAKKEAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGVPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTQTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q +KL++ + + D A L+
Sbjct: 185 QTIGMKLSLTGAVKYTIFAKDDAALFLIAFF 215
>gi|295692914|ref|YP_003601524.1| GTP-binding protein [Lactobacillus crispatus ST1]
gi|295031020|emb|CBL50499.1| GTP-binding protein [Lactobacillus crispatus ST1]
Length = 279
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP ++ +P++++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLGLIDVLVEVLDARIPQASRNPMIEELVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AWA A V+ + KL L K A+ K ++G +R
Sbjct: 64 ADPVLTKAWAAELAGDNKYVLALDSLHNTNMQKLVSLVKKAAAAKTEKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W++ +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTVINRLVGRNVAEVGNKPGVTKGQRWLKTNANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALFVLKNL 214
>gi|170017295|ref|YP_001728214.1| GTPase [Leuconostoc citreum KM20]
gi|169804152|gb|ACA82770.1| Predicted GTPase [Leuconostoc citreum KM20]
Length = 279
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DV E+ DARIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVAFELVDARIPDSSRNPEVDKLIGGKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F G V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRQWKAKFESDGHTVLVLDTRDPRTPQLVTKAARRAVEAKTAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +KLA+ + + + D A L+
Sbjct: 185 QAIGMKLALTGAVKDTIFSKDDAALFLISFF 215
>gi|300173224|ref|YP_003772390.1| GTP-binding protein RbgA [Leuconostoc gasicomitatum LMG 18811]
gi|299887603|emb|CBL91571.1| GTP-binding protein RbgA [Leuconostoc gasicomitatum LMG 18811]
Length = 284
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 122/208 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ LKL+DV+ E+ DARIP S+ +P +D+ +G++ R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVIFELVDARIPESSRNPEVDKLIGSKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW F +G V+ + + + + A+ + + ++G+ + +R
Sbjct: 65 ADPEQIRAWKARFESEGHTVLVLDTRDPRTPQLVIKAARRAVASKKAAQTARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ L+ LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKIAWLKTPTKLDLLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILV 307
Q +KLA+ + + + D A L+
Sbjct: 185 QVIGMKLALTGAVKDTIFAKDDAALFLI 212
>gi|331269648|ref|YP_004396140.1| HSR1-like GTP-binding protein [Clostridium botulinum BKT015925]
gi|329126198|gb|AEB76143.1| GTP-binding protein, HSR1-related protein [Clostridium botulinum
BKT015925]
Length = 280
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 116/211 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LK +D+VIE+RDARI S+ +P +D N+ RI++LN+ D+
Sbjct: 3 INWFPGHMAKTRREIKENLKFVDIVIEIRDARIVKSSANPDIDDICKNKPRIILLNKSDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W + + +V N G G + + L + + R+KG++ R
Sbjct: 63 SEEKVTKEWIKKLSNEFIRVASVNCVTGKGLNSIKPMINDLLKQKHDRLRAKGVVNITTR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +VG PNVGKSS IN++ K +PGVT+ +W++ +E LD+PG++ + D
Sbjct: 123 AMVVGIPNVGKSSFINKMAKNNTAKVGDKPGVTKNKQWIKTKMGIELLDTPGVLWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA I + D+ +A L+ L
Sbjct: 183 EQVGLNLAFTGAIKDEIMDIETLAFKLIGKL 213
>gi|331002665|ref|ZP_08326180.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330407078|gb|EGG86582.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 280
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 119/209 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ + D +KL+D++IE+ DAR P +T +P + + + RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMSDAIKLVDIIIEMTDARAPEATRNPEIMELGAAKSRIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N WA Y+ +QG + +F + + G L + + ++ + + +G+ R VR
Sbjct: 63 ADENANNRWANYYKEQGYECMFMDSRKKNGVNALIKAIENVSKEKRERDAKRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+LIN + R M +PGVT+ +W++ +E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTLINSVSGRAMAKTGNKPGVTKGNQWIKLKGQVELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
+ +A I + D+ ++ L++
Sbjct: 183 ENVGEMIAFIGSINDMIIDIRELGLELIK 211
>gi|395242086|ref|ZP_10419085.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
pasteurii CRBIP 24.76]
gi|394480447|emb|CCI85325.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
pasteurii CRBIP 24.76]
Length = 279
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 114/211 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L++++ L+DVV+EV DARIP S+ +P++ +G + +++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEEKINLIDVVVEVLDARIPSSSRNPMIADLVGTKPHVIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW G V+ + L L K AS+ K KG + +R
Sbjct: 64 ADPVLTKAWQKKLQTNGKFVLAMDSLHNTNMQGLIHLIKKAASEKTKKLEEKGAVNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
G PN GKS++INRL+ R + +PGVT+ W++ +++ LD+PGI+ + D
Sbjct: 124 IAFAGIPNCGKSTIINRLVGRNVAEVGNKPGVTKGQTWLKTSTNIQILDTPGILWPKFDD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA KLA I + + DVA +++L
Sbjct: 184 QAVGYKLAAFGAIKDTVFHADDVALFTIKLL 214
>gi|229829014|ref|ZP_04455083.1| hypothetical protein GCWU000342_01099 [Shuttleworthia satelles DSM
14600]
gi|229792177|gb|EEP28291.1| hypothetical protein GCWU000342_01099 [Shuttleworthia satelles DSM
14600]
Length = 281
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 125/215 (58%), Gaps = 8/215 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K ++++++ +KL+D+VIE+ DARIPL++ +P +DQ ++ R+++LN+ D+
Sbjct: 3 IQWFPGHMTKAKRQMQEDIKLIDLVIELLDARIPLASRNPEIDQLARDKARMILLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRS----KGLLP 215
+ W YF +QG V+ + + + L + + D K+R+ +G+
Sbjct: 63 SDPKMTSRWKEYFERQGMTVLALDSR----SASLRKPMQKAIMDATEKKRARDLRRGIKN 118
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
R VRA I G PNVGKS+LIN L R +PGVT+ +W+ +++ LD+PGI+
Sbjct: 119 RPVRAMIAGIPNVGKSTLINSLAGRAAARTGNKPGVTKGKQWIHLRDNIDLLDTPGILWP 178
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ DQ I LA+ I + V D++ ++ L
Sbjct: 179 KFEDQETGIHLAMIGAISDHVLQVEDLSLKVIHFL 213
>gi|257125138|ref|YP_003163252.1| HSR1-like GTP-binding protein [Leptotrichia buccalis C-1013-b]
gi|257049077|gb|ACV38261.1| GTP-binding protein HSR1-related [Leptotrichia buccalis C-1013-b]
Length = 291
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+ + + LK++D+VIE+ DARIPLS+ +P + + N+K+I+VLN+ D+
Sbjct: 3 INWYPGHMKKTKDLIVENLKIIDIVIEILDARIPLSSKNPDISKLANNKKKIIVLNKVDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGT--MKLSRLAKALASDVNVKRRSKGLLPRA 217
+ + W YF + F + GT +L ++ + ++ K + KGL
Sbjct: 63 VDSKELKVWEDYFLENKFSDYFVALSVEKGTNFNELRKITDKIYAEKLEKMKKKGLRKTE 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
VRA IVG PNVGKS IN+ + + PG TR +W++ + LE LD+PG++ +
Sbjct: 123 VRAMIVGIPNVGKSKFINKFVNKNKARVGNTPGFTRGKQWIKIDEKLELLDTPGVLWPKF 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D A LAI I + + +A + L
Sbjct: 183 EDDEVAYNLAITGSIKDNVLPLEQIAMKFLDKL 215
>gi|423070343|ref|ZP_17059119.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius F0413]
gi|355365704|gb|EHG13424.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
intermedius F0413]
Length = 283
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 119/197 (60%), Gaps = 4/197 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH++K +++++ +K +D V + DAR+P S+ +P++ + +G++ ++L+LN+ D+
Sbjct: 4 IQWFPGHMSKARRQVQENIKFVDFVTILVDARLPFSSQNPMLTKIVGDKPKLLILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF Q K + N + K++ AK+L + +++ +G+ +R
Sbjct: 64 ADAHLTKEWQRYFENQDIKTLAINSKEQSTVKKVTEAAKSLMKEKIARQKERGIQIETLR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I+G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + +
Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVTGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFEE 183
Query: 280 QAAAIKL----AICDDI 292
A+KL AI DD+
Sbjct: 184 ADIALKLALTGAIKDDV 200
>gi|114567011|ref|YP_754165.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337946|gb|ABI68794.1| Ras superfamily GTP-binding protein YlqF [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 278
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 124/211 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ K +E++ +KL+D+ + + DAR P S + +++ N+K ++VLN+ D+
Sbjct: 3 INWFPGHMVKARREIEKNIKLVDIALILLDARAPFSCRNSDLEKIARNKKVVMVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
S + ++G V + G G + R+AK+ + + + KG PRA+R
Sbjct: 63 ASPEAIRRYMQALEQEGFLVATMDSLSGKGRQAVLRMAKSAFREKAEELQRKGRRPRAIR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PN+GKS+ +N L+ +++ +PGVTR +WVR +D+E LD+PG++ R+
Sbjct: 123 AMVMGVPNIGKSTFLNCLVGQKIAQTGAKPGVTRGKQWVRLHEDIELLDTPGLMWPRVES 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ +KLA+ D +GE +Y +V L+ +L
Sbjct: 183 EEQGLKLALLDIVGENAYSEYEVGLYLLSIL 213
>gi|169830847|ref|YP_001716829.1| HSR1-like GTP-binding protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169637691|gb|ACA59197.1| GTP-binding protein, HSR1-related [Candidatus Desulforudis
audaxviator MP104C]
Length = 284
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 114/213 (53%), Gaps = 8/213 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
V WYPGH+AKT++ +++QL+L D+V E+ DARIP S+ +P++++ ++ RIL+L + D+
Sbjct: 3 VHWYPGHMAKTKRLIREQLRLCDLVFELADARIPQSSRNPVLNELTAHKPRILILTKPDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLG--MGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
W F QG + N G G + R + L + G PRA
Sbjct: 63 ADPTRTGEWIEVFGTQGIPALKFNAVRGGESGIRTVMRTVRDLLKN------PAGNRPRA 116
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
RA VG PNVGKSS INRL +R+ PG TR +W+R + LE LD+PG + ++
Sbjct: 117 YRAVTVGIPNVGKSSFINRLTGQRVAQTGKAPGTTRGKQWIRVNRWLELLDTPGTLWPKL 176
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
A KLA I E + +VA LV L
Sbjct: 177 GSPAVGFKLAATGAIREEVFSREEVAGWLVSWL 209
>gi|254556725|ref|YP_003063142.1| GTPase [Lactobacillus plantarum JDM1]
gi|254045652|gb|ACT62445.1| GTPase [Lactobacillus plantarum JDM1]
Length = 284
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 119/204 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++D L L+D+V E+ DARIP+++ +P +++ + + +L++ ++D+
Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTVQQKPHLLIMTKKDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++ QG I + + ++++ A + +D K ++G+ R +R
Sbjct: 64 ADPQATADWVKHYEDQGQVAIAVDSRSRTIGKQMTQAASDMLADKLAKIAARGITNRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N ++ +++ RPGVT+ +W++ LE LD+PGI+ + D
Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASNKLELLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q KLA+ I E Y DVA
Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVA 207
>gi|294782578|ref|ZP_06747904.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
1_1_41FAA]
gi|294481219|gb|EFG28994.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
1_1_41FAA]
Length = 292
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLLEKKELEVWKKYFKEQDFADEVVEMSAETGYNLKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + + LAI I + + DVA L++ + +
Sbjct: 182 WPKFESETVGVNLAISGAIRDEILPIEDVACSLIRKMLK 220
>gi|373471022|ref|ZP_09562101.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
gi|371761215|gb|EHO49849.1| ribosome biogenesis GTP-binding protein YlqF [Lachnospiraceae
bacterium oral taxon 082 str. F0431]
Length = 279
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 124/216 (57%), Gaps = 6/216 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ + D +KL+D++IE+ DAR P +T +P + + RI++LN+ D
Sbjct: 3 IQWYPGHMTKAKRAMSDAIKLVDIIIEMTDARAPEATRNPEIMGLGTGKSRIIILNKAD- 61
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
+AD NA WA+Y+ +QG + +F + + G L + + ++ D + +G+ R
Sbjct: 62 --LADENANIRWASYYKEQGYECMFMDSRQKNGVNSLIKAIENVSKDKRERDAKRGIKNR 119
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VRA + G PNVGKS+LIN + R M +PGVT+ +W++ +E LD+PGI+ +
Sbjct: 120 PVRAMVAGIPNVGKSTLINTVSGRAMAKTGNKPGVTKGNQWIKLKGQVELLDTPGILWPK 179
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
D+ +A I + D+ ++ L++ L +
Sbjct: 180 FEDERVGEMIAFIGSINDMIIDIRELGLELIKWLLK 215
>gi|414597377|ref|ZP_11446945.1| GTP-binding protein RbgA [Leuconostoc citreum LBAE E16]
gi|390481873|emb|CCF29006.1| GTP-binding protein RbgA [Leuconostoc citreum LBAE E16]
Length = 279
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + +++ L+L+DV E+ DARIP S+ +P +D+ +G + R+L++ + D+
Sbjct: 5 IQWFPGHMAKAFRLMRENLQLVDVAFELVDARIPESSRNPEVDKLIGGKPRLLIMTKADL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F G V+ + + +++ A+ + ++G+ + +R
Sbjct: 65 ADPEQTRQWKAKFESDGHTVLVLDTRDPRTPQLVTKAARRAVEAKTAAQLARGIQDQPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A I G PNVGKS+L+N L+ + + P A RPGVT+ + W++ LE LDSPG++ + D
Sbjct: 125 AMITGIPNVGKSTLLNHLVMKNVAPTADRPGVTKKVAWLKTPTKLELLDSPGVLWPKFED 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
QA +KLA+ + + + D A L+
Sbjct: 185 QAIGMKLALTGAVKDTIFSKDDAALFLISFF 215
>gi|296328417|ref|ZP_06870943.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154491|gb|EFG95283.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 289
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 128/220 (58%), Gaps = 3/220 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DV +E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVALEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEYVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLAR 312
+ + + LAI I + + DVA ++L +ML +
Sbjct: 182 WPKFESETVGMNLAITGAIRDEILPIEDVACSLLRKMLEQ 221
>gi|408410159|ref|ZP_11181400.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus sp.
66c]
gi|407875678|emb|CCK83206.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus sp.
66c]
Length = 283
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 118/213 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+++L L+DVV+E+ DARIPLS+ +P++++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEEKLSLIDVVVEILDARIPLSSRNPMIEELVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W T V+ + Q L L K +S+ K +G VR
Sbjct: 64 ADPVMTKLWQKKLQGPRTLVMAMDAQHNTNVQALVTLIKKASSEKVKKLEERGASNPIVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++INRL+ + +PGVT+ W++ ++ LD+PGI+ + D
Sbjct: 124 IALVGVPNCGKSTIINRLVGHNVAITGDKPGVTKGQAWLKTNYGIQILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA I + + DVA ++++L +
Sbjct: 184 QDVGYKLAAFGAIKDTIFHADDVALFVIRLLKQ 216
>gi|365840102|ref|ZP_09381314.1| ribosome biogenesis GTP-binding protein YlqF [Anaeroglobus
geminatus F0357]
gi|364562557|gb|EHM40395.1| ribosome biogenesis GTP-binding protein YlqF [Anaeroglobus
geminatus F0357]
Length = 280
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 121/205 (59%)
Query: 107 IAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMADRN 166
+AK ++ +++ LK++D VIE+ DARIP+S+T+P++ LG + ++VLN+ D+ A
Sbjct: 1 MAKAKRLIEENLKVIDAVIELVDARIPVSSTNPMIAALLGEKPSVIVLNKADLADPAALE 60
Query: 167 AWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIVGYP 226
W Y+ +G VI N + G G +L + +A R++GL R VR I+G P
Sbjct: 61 LWKAYYRNRGRHVIALNSKDGRGIKQLIQAVHKMAEPKLAHWRARGLKNRPVRTIILGIP 120
Query: 227 NVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAAIKL 286
NVGKS+LINRL R + A RPG T+ +WV L+ LD+PG++ ++ DQ +A +L
Sbjct: 121 NVGKSTLINRLAGRNVAKTADRPGETKGKQWVHLSDSLDLLDTPGVLWPKLEDQRSAKRL 180
Query: 287 AICDDIGERSYDVADVAAILVQMLA 311
A I + +D+ +V L+ L+
Sbjct: 181 AATGAISDAVFDMQEVVTELISELS 205
>gi|51892611|ref|YP_075302.1| hypothetical protein STH1473 [Symbiobacterium thermophilum IAM
14863]
gi|51856300|dbj|BAD40458.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 286
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK + L++ L+DVV+E+ DAR PL++ +P + + ++ ++L+LN+ D+
Sbjct: 2 IQWFPGHMAKARRILQENAPLVDVVLEIVDARCPLASRNPDLMALVAHKPQVLILNKADL 61
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMK-LSRLAKALASDVNVKRRSKGLLPRAV 218
A W + G + + G G + L+ + +A A + +KG PR
Sbjct: 62 ADPAATRLWVERLNEPGRPAVALDAVRGTGAREVLAAIRRAFAPVLRAW-TAKGRKPRPA 120
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
R VG PNVGKSS INRL+ R P +PGVTR +W+R GKD+E LD PGI+ +
Sbjct: 121 RVMAVGIPNVGKSSAINRLVGARRAPVGDKPGVTRGKQWIRIGKDVELLDMPGILVPKFE 180
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
DQ + LA I + +D +VA L+ ++
Sbjct: 181 DQRDGLLLAATGAIKDEVFDQREVANHLLHLI 212
>gi|304384965|ref|ZP_07367311.1| ribosome biogenesis GTP-binding protein YlqF [Pediococcus
acidilactici DSM 20284]
gi|418069181|ref|ZP_12706461.1| GTP-binding protein YlqF [Pediococcus acidilactici MA18/5M]
gi|304329159|gb|EFL96379.1| ribosome biogenesis GTP-binding protein YlqF [Pediococcus
acidilactici DSM 20284]
gi|357537914|gb|EHJ21937.1| GTP-binding protein YlqF [Pediococcus acidilactici MA18/5M]
Length = 287
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 124/212 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++++LKL+DVV E+ DARIP+S+ +P+++ + ++ +L+L + D+
Sbjct: 4 IQWYPGHMAKAIRQVEEKLKLVDVVFELVDARIPVSSRNPMIESVIKDKPHLLILTKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF K G + N + + + +A+ +D S+G+ ++
Sbjct: 64 ADPQETQRWLEYFRKNGDHAVALNSKEPSTEKIILKHTRAILADKLENWESRGIKKTEIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ +G PNVGKS+L+N L+ +++ RPGVT+ +W++ + L LD+PGI+ + D
Sbjct: 124 SMCIGIPNVGKSTLLNHLVNKKVAITGDRPGVTKKQQWLKSRQGLYLLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q+ KLA I + Y DVA +Q+ +
Sbjct: 184 QSVGSKLAFTGAIKDNLYANDDVALFGLQIFS 215
>gi|365853584|ref|ZP_09393851.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
parafarraginis F0439]
gi|363712209|gb|EHL95908.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
parafarraginis F0439]
Length = 296
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 118/207 (57%), Gaps = 6/207 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++ ++ + L+D+V EV DARIPL++ +P + + G + + +L ++D+
Sbjct: 11 IQWFPGHMAKAIRQFEENVSLVDIVFEVIDARIPLTSQNPEVARITGEKPHLFILTKKDL 70
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
ADR A W YF G I + + + + + S + KG+ R
Sbjct: 71 ---ADREATQRWLAYFKDHGQPAIAVDAKDHFNINDVLSVINPIMSPKLAREEQKGMKKR 127
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+RA VG PNVGKS+++NRL+ RR RPGVT+ +W++ GK LE LD+PGI+ +
Sbjct: 128 PIRAVSVGVPNVGKSTVLNRLVNRRAAQVGNRPGVTKGQQWLKAGKKLELLDTPGILWPK 187
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVA 303
+ Q A KLA+ I + + D+A
Sbjct: 188 FASQEIANKLALTGAIKDSVFASDDIA 214
>gi|440780920|ref|ZP_20959391.1| GTPase YlqF [Clostridium pasteurianum DSM 525]
gi|440221508|gb|ELP60713.1| GTPase YlqF [Clostridium pasteurianum DSM 525]
Length = 288
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LKL+D VIE+RD+RI S+ +P +D+ ++ RI++LN+ D+
Sbjct: 9 INWFPGHMAKTRREIKENLKLVDAVIEIRDSRIVQSSANPEIDKICKDKPRIILLNKCDL 68
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLS-RLAKALASDVNVKRRSKGLLPRAV 218
W +K K + N G+G + + K L ++ + + KG++ +
Sbjct: 69 SEEKVTKEWINVLSKNNVKALAVNSLNGLGLNSIKGEIDKLLKEKID-RLKQKGVISVII 127
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA +VG PNVGKSS IN++ K +PGVT+ +W++ +E +D+PG++ +
Sbjct: 128 RAMVVGIPNVGKSSFINKMAKNTAAKIGDKPGVTKSKQWIKTKMGIELMDTPGVLWPKFE 187
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
++ + LA I + DV ++A L++ L +
Sbjct: 188 EKKVGLNLAFTGAIKDEIMDVEELALSLIERLQK 221
>gi|227879126|ref|ZP_03997010.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256850242|ref|ZP_05555671.1| GTP binding protein [Lactobacillus crispatus MV-1A-US]
gi|293380235|ref|ZP_06626316.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus 214-1]
gi|312977294|ref|ZP_07789042.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus CTV-05]
gi|423318747|ref|ZP_17296624.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus FB049-03]
gi|423321615|ref|ZP_17299486.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus FB077-07]
gi|227861283|gb|EEJ68918.1| GTP-binding protein [Lactobacillus crispatus JV-V01]
gi|256712879|gb|EEU27871.1| GTP binding protein [Lactobacillus crispatus MV-1A-US]
gi|290923202|gb|EFE00124.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus 214-1]
gi|310895725|gb|EFQ44791.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus CTV-05]
gi|405593395|gb|EKB66845.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus FB049-03]
gi|405593736|gb|EKB67176.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus FB077-07]
Length = 279
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP ++ +P+++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLGLIDVLVEVLDARIPQASRNPMIEGLVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AWA A V+ + KL L K A+ K ++G +R
Sbjct: 64 ADPVLTKAWAAELAGDNKYVLALDSLHNTNMQKLVSLVKKAAAAKTEKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W++ +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTVINRLVGRNVAEVGNKPGVTKGQRWLKTNANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALFVLKNL 214
>gi|227529207|ref|ZP_03959256.1| GTP-binding protein [Lactobacillus vaginalis ATCC 49540]
gi|227350882|gb|EEJ41173.1| GTP-binding protein [Lactobacillus vaginalis ATCC 49540]
Length = 290
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 121/213 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DAR+P S+ +P + G++ R+L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDIVFELVDARVPYSSQNPEIALAAGDKPRLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W TYF + V+ + + + ++ +K + D + +KGL R +R
Sbjct: 64 ADSKRLGEWLTYFKEHNQPVLALDSRQQNVSKIVTAKSKEILHDKLAEEAAKGLKKRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAVTGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFAS 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q LA+ I + Y DVA + L R
Sbjct: 184 QKQGTMLALSGAIKDSLYAKDDVALFALDYLRR 216
>gi|373106131|ref|ZP_09520435.1| ribosome biogenesis GTP-binding protein YlqF [Stomatobaculum
longum]
gi|371653227|gb|EHO18631.1| ribosome biogenesis GTP-binding protein YlqF [Stomatobaculum
longum]
Length = 293
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +E++ ++++D+VIE+ DAR P S+ +P + + ++R++VLN+ D+
Sbjct: 3 IQWYPGHMTKARREMESDVRIVDMVIELLDARAPYSSGNPEIRRLGQGKERVIVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMK-LSRLAKALASDVNVKRRSKGLLPRAV 218
A AW F +G + + + G G K L R A A + R +G+L R V
Sbjct: 63 ADAATTAAWQRAFQAEGAHCVAMDAR-GSGNRKLLMRTIDAAAEAKRERDRKRGILNRPV 121
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA + G PNVGKS+LIN L R +PGVTR +W+RF + +E LD+PGI+ +
Sbjct: 122 RAMVAGIPNVGKSTLINMLSGRSSAKTGNKPGVTRGNQWIRFHQSVELLDTPGILWPKFE 181
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D A K+A I E D ++A L+ L
Sbjct: 182 DPAIGEKIAFLGSINEMIVDKTELAVTLLGFL 213
>gi|340752547|ref|ZP_08689346.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
2_1_31]
gi|340567306|gb|EEO37392.2| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
2_1_31]
Length = 292
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 124/217 (57%), Gaps = 2/217 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLLEKKELEVWKKYFKEQDFADEVVEMSAETGYNLKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + + LAI I + + D+A L++ +
Sbjct: 182 WPKFESETVGVNLAISGAIRDEILPIEDIACSLIRKM 218
>gi|162447203|ref|YP_001620335.1| GTPase [Acholeplasma laidlawii PG-8A]
gi|161985310|gb|ABX80959.1| GTPase, YlqF-like protein [Acholeplasma laidlawii PG-8A]
Length = 286
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 121/214 (56%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
++ VQW+PGH+ K+ +E+K+++KLMD+V + DAR+P S+ +P + + +G++ +L+ N+
Sbjct: 1 MKQVQWFPGHMFKSLREIKEKIKLMDMVFLLVDARLPFSSMNPEILKIVGDKPTLLLFNK 60
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
D+ + W ++ QG + N G K+ +K + + ++ ++KG+
Sbjct: 61 IDLADRKTVDKWVEFYEAQGFYTLLINSNDGFNVNKIYSRSKEILEEKILRSKNKGMKFD 120
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
VR I+G PNVGKS+LIN+L+ ++ +PGVT+ +W++ E LD+PG++ +
Sbjct: 121 RVRGMILGIPNVGKSTLINKLVSKKATNVGNKPGVTKSQQWIKINPHFELLDTPGVLWPK 180
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
D+ LAI I + + + V + L
Sbjct: 181 FEDETVGFALAITGAIKDDTLPMNQVVIYAINYL 214
>gi|417002721|ref|ZP_11942025.1| ribosome biogenesis GTP-binding protein YlqF [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479009|gb|EGC82110.1| ribosome biogenesis GTP-binding protein YlqF [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 280
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++ + D LKL+D+V+E+ DARIP S+ +P++D+ + ++ R++++N+ D+
Sbjct: 5 INWFPGHMKKTKEIIIDNLKLVDIVLEIIDARIPNSSRNPMLDEIIADKPRMIIMNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
++ W F QG I N + + ++ + AK L S+ K K + +R
Sbjct: 65 SDPSENKKWIDKFKSQGIPAIAMNSKENVNVDRIYKEAKNLLSEKFKKNEEKNIENPLIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PN GKS+ IN++ K++ RPG+T+ +W++ G +++ LD+PG++ + D
Sbjct: 125 MMIVGVPNSGKSTFINKVSKKKGAKVGNRPGITQSKQWIKTGSNIQLLDTPGVLWPKF-D 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + L+ + I + ++ D+ ++ +
Sbjct: 184 EEVGLHLSFTNAIKDEVLNIEDLTLKFLEEM 214
>gi|402574090|ref|YP_006623433.1| Ras superfamily GTP-binding protein YlqF [Desulfosporosinus
meridiei DSM 13257]
gi|402255287|gb|AFQ45562.1| Ras superfamily GTP-binding protein YlqF [Desulfosporosinus
meridiei DSM 13257]
Length = 275
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 124/209 (59%), Gaps = 1/209 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + L +QLK +DVV+E+ DARIP+S+ +P++ + LG++ R+L+LN+ D+
Sbjct: 3 IQWFPGHMAKTRRLLTEQLKWVDVVLELADARIPVSSRNPMLHKLLGSKARLLLLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ + W Y + G V + G+G ++ + + ++ KG+ + +R
Sbjct: 63 ANPNWTSKWVKYLKESGP-VYAVSATSGVGIKQIVPELERMVLAKQARQAEKGIRQQMIR 121
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PN+GKSSLIN+L +PGVTR +WVR + +E LD+PG++ + D
Sbjct: 122 VMIVGIPNIGKSSLINQLTGGAQAKVGNKPGVTRGNQWVRIHERVELLDTPGMLWPKFDD 181
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQ 308
KLA I + +D+ +++ +++
Sbjct: 182 LEVGRKLAALGAIKDDVFDIEELSTWVIE 210
>gi|337736979|ref|YP_004636426.1| ribosomal biogenesis GTPase [Clostridium acetobutylicum DSM 1731]
gi|384458486|ref|YP_005670906.1| ribosomal biogenesis GTPase [Clostridium acetobutylicum EA 2018]
gi|325509175|gb|ADZ20811.1| ribosomal biogenesis GTPase [Clostridium acetobutylicum EA 2018]
gi|336292584|gb|AEI33718.1| ribosomal biogenesis GTPase [Clostridium acetobutylicum DSM 1731]
Length = 283
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 120/216 (55%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
+ + W+PGH+AKT +E+++ LKL+D VIE+RDARI S+++P ++ ++ RI++LN+
Sbjct: 3 IESINWFPGHMAKTRREIRENLKLVDAVIEIRDARIVYSSSNPDINSICKDKPRIILLNK 62
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
D+ + + W + + + I N G G + L +KG+
Sbjct: 63 FDLAEKSITDNWVKALSSESIRAIPVNALEGRGLNSIKPALNELLKPKLDNMAAKGIQNY 122
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R +VG PNVGKSS IN++ K ++ +PGVT+ +W++ +E +D+PG++ +
Sbjct: 123 IIRVMVVGIPNVGKSSFINKMAKNKVAKVGNKPGVTKSKQWIKTNIGIELMDTPGVLWPK 182
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
DQ + LA I + D+ ++A LVQ L +
Sbjct: 183 FQDQKVGLNLAFTGAIKDEIMDIEELALKLVQFLQK 218
>gi|377809646|ref|YP_005004867.1| ribosome biogenesis GTP-binding protein YlqF [Pediococcus
claussenii ATCC BAA-344]
gi|361056387|gb|AEV95191.1| ribosome biogenesis GTP-binding protein YlqF [Pediococcus
claussenii ATCC BAA-344]
Length = 288
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 116/204 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++++LKL+D+V E+ DARIP S+ +P++ + + N+ +L+L + D+
Sbjct: 4 IQWYPGHMAKAIRQVQEKLKLVDIVFELVDARIPESSRNPMIQEVIENKPHLLLLTKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ + G I + + + R + + + KG++ +R
Sbjct: 64 ADPVETKEWLKYYRQHGENAIAIDSRETKIEQVIIRETNKILKEKIQNKADKGIISHEIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+N LL +++ +PGVT+ +W++ L LD+PGI+ + D
Sbjct: 124 AMCIGIPNVGKSTLLNHLLNKKVAITGDKPGVTKKQQWLKSPHGLSLLDTPGILWPKFDD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q+ KLA I E Y DVA
Sbjct: 184 QSIGTKLAFTGAIKENLYANDDVA 207
>gi|333371168|ref|ZP_08463130.1| ribosome biogenesis GTP-binding protein YlqF [Desmospora sp. 8437]
gi|332976612|gb|EGK13453.1| ribosome biogenesis GTP-binding protein YlqF [Desmospora sp. 8437]
Length = 296
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 122/215 (56%), Gaps = 6/215 (2%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++++++L +D+V E+ DAR+PLS+ +P++ + + R+++L + D+
Sbjct: 3 IQWFPGHMAKARRQVEEKLNQVDLVFELLDARLPLSSRNPMIGDLIREKPRLILLTKSDL 62
Query: 160 ISMADRNA---WATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
ADR A WA +F + + G G ++ +++ L + + KG+
Sbjct: 63 ---ADREATRLWAGFFRSDKVRAQPVDILSGAGIQQIGPISRELVKEKLASQTRKGIRRH 119
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+RA +VG PNVGKS+LINRL R RPGVTR +W++ G +E LD+PGI+ +
Sbjct: 120 RIRAMVVGVPNVGKSALINRLAGRSTAKTGDRPGVTRNQQWIKLGNGMELLDTPGILWPK 179
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
D ++LA I E V ++ L+ +A
Sbjct: 180 FDDPKVGLRLAASGAIKEEVLSVEEIGLYLLNYIA 214
>gi|15895038|ref|NP_348387.1| ribosomal biogenesis GTPase [Clostridium acetobutylicum ATCC 824]
gi|15024731|gb|AAK79727.1|AE007685_3 Predicted GTPase, YLQF B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
Length = 283
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 120/216 (55%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
+ + W+PGH+AKT +E+++ LKL+D VIE+RDARI S+++P ++ ++ RI++LN+
Sbjct: 3 IESINWFPGHMAKTTREIRENLKLVDAVIEIRDARIVYSSSNPDINSICKDKPRIILLNK 62
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
D+ + + W + + + I N G G + L +KG+
Sbjct: 63 FDLAEKSITDNWVKALSSESIRAIPVNALEGRGLNSIKPALNELLKPKLDNMAAKGIQNY 122
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R +VG PNVGKSS IN++ K ++ +PGVT+ +W++ +E +D+PG++ +
Sbjct: 123 IIRVMVVGIPNVGKSSFINKMAKNKVAKVGNKPGVTKSKQWIKTNIGIELMDTPGVLWPK 182
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
DQ + LA I + D+ ++A LVQ L +
Sbjct: 183 FQDQKVGLNLAFTGAIKDEIMDIEELALKLVQFLQK 218
>gi|325290407|ref|YP_004266588.1| Ras superfamily GTP-binding protein YlqF [Syntrophobotulus
glycolicus DSM 8271]
gi|324965808|gb|ADY56587.1| Ras superfamily GTP-binding protein YlqF [Syntrophobotulus
glycolicus DSM 8271]
Length = 275
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 2/211 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ KT+++L +QLK +DV+IE DAR+PLS+ +PL+ + LG + ++LVLN+ D+
Sbjct: 3 IQWFPGHMTKTKRQLLEQLKWVDVIIETGDARLPLSSRNPLLRELLGAKPKLLVLNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W ++G V+ + G G K+ + + L ++ K KG + + +R
Sbjct: 63 ADEDQTGKWLKKLEQEGP-VLAVSASTGAGMKKIIPMLEELMAEKWQKLAEKG-IKKPIR 120
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++IN L R +PGVTR +W+R +E LD+PG++ + D
Sbjct: 121 VMVVGIPNTGKSTIINTLTGRAQARTGNKPGVTRGSQWLRIHGRIELLDTPGMLWPKFDD 180
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA + + +D+ ++A L+ L
Sbjct: 181 QIIGRKLAASGAVRDEVFDLEELAQWLIAWL 211
>gi|421146083|ref|ZP_15605866.1| GTP-binding protein, partial [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487517|gb|EJG08489.1| GTP-binding protein, partial [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 199
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 116/196 (59%), Gaps = 2/196 (1%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++S + + W YF +Q +V+ + + G KL + ++ + K KGL
Sbjct: 62 KSDLVSKQELDKWKKYFKEQDFADEVVEISAETGYNVKKLYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAIC 289
+ + I LAI
Sbjct: 182 WPKFESETVGINLAIM 197
>gi|409349423|ref|ZP_11232890.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
equicursoris CIP 110162]
gi|407878170|emb|CCK84948.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
equicursoris CIP 110162]
Length = 283
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 118/213 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+ K +L+++L L+DVV+E+ DARIPLS+ +P++++ +GN+ I++LN+ D+
Sbjct: 4 IQWFPGHMNKARNQLEEKLSLIDVVVEILDARIPLSSRNPMIEELVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W T V+ + Q L L K +S+ K +G VR
Sbjct: 64 ADPVMTKLWQKKLQGPRTLVMAMDAQHNTNVQALVTLIKKASSEKVKKLEERGASNPIVR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++INRL+ + +PGVT+ W++ ++ LD+PGI+ + D
Sbjct: 124 IALVGVPNCGKSTIINRLVGHNVAITGDKPGVTKGQAWLKTNYGIQILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA I + + DVA ++++L +
Sbjct: 184 QDVGYKLAAFGAIKDTIFHADDVALFVIRLLKQ 216
>gi|419841874|ref|ZP_14365236.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
gi|386903911|gb|EIJ68712.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
necrophorum subsp. funduliforme ATCC 51357]
Length = 296
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +K+ + L+DVV+E+ DARIPLS+ +P + + N+KRI+VLN
Sbjct: 2 SMTEINWYPGHMKKTKDLIKENMPLIDVVLEIVDARIPLSSKNPDIPIFAKNKKRIVVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ ++ + W YF +Q V+ + + G +L ++ + K +KGL
Sbjct: 62 KSDLVEKSELSRWKEYFLQQEKADAVVEISAETGYNVKQLYAYIDKVSKEKKEKLYAKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+R ++G PNVGKS LINR++ + +PG T+ +WV+ LE LD+PGI+
Sbjct: 122 KKVNIRIMVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVKLKDGLELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILV 307
+ ++ LA+ I + + +VA +
Sbjct: 182 WPKFENREVGFHLAMTGAIKDEILPLEEVACTFL 215
>gi|422317044|ref|ZP_16398413.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
periodonticum D10]
gi|404590282|gb|EKA92731.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
periodonticum D10]
Length = 292
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 124/219 (56%), Gaps = 2/219 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN
Sbjct: 2 SMTQINWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ + W YF +Q +V+ + + G K + ++ + K KGL
Sbjct: 62 KSDLVEKKELEIWKKYFKEQDFADEVVEMSAETGYNLKKFYEAIEFVSKERKEKLLKKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+ R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+
Sbjct: 122 KKVSTRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTRGKQWVRIKEGIELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + + LAI I + + D+A L++ + +
Sbjct: 182 WPKFESETVGVNLAISGAIRDEILPIEDIACSLIRKMLK 220
>gi|269118825|ref|YP_003307002.1| GTP-binding protein HSR1-like protein [Sebaldella termitidis ATCC
33386]
gi|268612703|gb|ACZ07071.1| GTP-binding protein HSR1-related protein [Sebaldella termitidis
ATCC 33386]
Length = 285
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 117/215 (54%), Gaps = 2/215 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT++ + + LK++D+VIEV DARIPLS+ +P + + N+KR+ VLN+ D+
Sbjct: 3 INWYPGHMKKTKETIAENLKIVDLVIEVLDARIPLSSKNPDISKLAKNKKRLTVLNKVDL 62
Query: 160 ISMADRNAWATYFAKQGTK--VIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
+ W YF + V+ + + G +L R+ + + K + KGL
Sbjct: 63 ADEREVENWKEYFIRNDISDYVLAISAEKGTNLNELKRIVDEIYIEKLEKAKKKGLRKTE 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
VRA I G PNVGKS LIN+ + +PG TR +WV+ + LE LD+PG++ +
Sbjct: 123 VRALIAGIPNVGKSKLINKFAGKTKARVGDKPGFTRGKQWVKASEKLELLDTPGVLWPKF 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
D LAI I + + +V ++ + + +
Sbjct: 183 DDPEVGYSLAITGSIKDDILPIEEVVSVFIDRMRK 217
>gi|340758663|ref|ZP_08695248.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium varium
ATCC 27725]
gi|251833783|gb|EES62346.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium varium
ATCC 27725]
Length = 287
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +K+ ++L+D+V+EV DARIPLS+ +P + + N+KR++VLN
Sbjct: 2 SMTKINWYPGHMKKTKDLIKENMQLIDIVLEVVDARIPLSSKNPDITVFAKNKKRVIVLN 61
Query: 156 REDMISMADRNAWATYFAKQGT--KVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ ++ W YF + +V+ + + G L + ++++ K ++KGL
Sbjct: 62 KSDLVEKSEILYWKKYFKENNMADEVLEISAETGFNIRALYSIIDKVSAEKKEKMKAKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
R +VG PNVGKS LINR++ + +PG TR +WVR + LE LD+PGI+
Sbjct: 122 RKVNTRLMVVGIPNVGKSRLINRIVGKSSAGVGNKPGFTRGKQWVRIKEGLELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ LAI I + + D++ IL+ + +
Sbjct: 182 WPKFESDEVGQNLAITGAIRDEILPIEDISCILISKMIK 220
>gi|421499461|ref|ZP_15946503.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
gi|402269611|gb|EJU18937.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
necrophorum subsp. funduliforme Fnf 1007]
Length = 296
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +K+ + L+DVV+E+ DARIP+S+ +P + + N+KRI+VLN
Sbjct: 2 SMTEINWYPGHMKKTKDLIKENMPLIDVVLEIVDARIPISSKNPDIPMFAKNKKRIVVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ ++ + W YF +Q V+ + + G +L ++ + K +KGL
Sbjct: 62 KSDLVEKSELSRWKEYFLQQEKADAVVEISAETGYNVKQLYACIDKVSKEKKEKLYAKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+R ++G PNVGKS LINR++ + +PG T+ +WV+ LE LD+PGI+
Sbjct: 122 KKVNIRIMVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVKLKDGLELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILV 307
+ ++ LA+ I + + +VA +
Sbjct: 182 WPKFENREVGFHLAMTGAIKDEILPLEEVACTFL 215
>gi|417925852|ref|ZP_12569267.1| ribosome biogenesis GTP-binding protein YlqF [Finegoldia magna
SY403409CC001050417]
gi|341590777|gb|EGS34008.1| ribosome biogenesis GTP-binding protein YlqF [Finegoldia magna
SY403409CC001050417]
Length = 285
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 119/218 (54%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+ + WYPGH+ K ++K+ +KL+D+V+ + D+RI S+ +P+++ L ++ ++++LN
Sbjct: 2 DINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILLN 61
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ DM W YFAK+ + +G+ G K+ K + DV R+ K +
Sbjct: 62 KMDMADPKITQNWINYFAKKNITALPIDGKNGKNLDKIEPTTKKILEDVLSNRKDKNIKS 121
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R IVG PNVGKS++IN+L R+ PGVTR +W+R +E LD+PG++
Sbjct: 122 EIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRTNQWIRIKGKMELLDTPGVLWP 181
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ D + LA I + D ++A L++ L I
Sbjct: 182 KFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSI 219
>gi|340755132|ref|ZP_08691834.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
D12]
gi|313686144|gb|EFS22979.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
D12]
Length = 298
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +K+ + L+DVV+E+ DARIP+S+ +P + + N+KRI+VLN
Sbjct: 4 SMTEINWYPGHMKKTKDLIKENMPLIDVVLEIVDARIPISSKNPDIPMFAKNKKRIVVLN 63
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ ++ + W YF +Q V+ + + G +L ++ + K +KGL
Sbjct: 64 KSDLVEKSELSRWKEYFLQQEKADAVVEISAETGYNVKQLYACIDKVSKEKKEKLYAKGL 123
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
+R ++G PNVGKS LINR++ + +PG T+ +WV+ LE LD+PGI+
Sbjct: 124 KKVNIRIMVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVKLKDGLELLDTPGIL 183
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILV 307
+ ++ LA+ I + + +VA +
Sbjct: 184 WPKFENREVGFHLAMTGAIKDEILPLEEVACTFL 217
>gi|358466365|ref|ZP_09176195.1| hypothetical protein HMPREF9093_00665 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357069115|gb|EHI79063.1| hypothetical protein HMPREF9093_00665 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 290
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 122/213 (57%), Gaps = 2/213 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN+ D+
Sbjct: 4 INWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLNKSDL 63
Query: 160 ISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
+ + W YF +Q +V+ + + G KL + ++ + K KGL +
Sbjct: 64 LEKKELEVWKKYFKEQDFADEVVEMSAETGYNLKKLYEAIEFVSKERKEKLLKKGLKKVS 123
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
R ++G PNVGKS LINR++ + +PG TR +WVR + +E LD+PGI+ +
Sbjct: 124 TRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTRGKQWVRIKEGIELLDTPGILWPKF 183
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ I LAI I + + DV+ L++ +
Sbjct: 184 ESETVGINLAISGAIRDEILPIEDVSCALIKKM 216
>gi|293115307|ref|ZP_05790830.2| ribosome biogenesis GTP-binding protein YlqF [Butyrivibrio
crossotus DSM 2876]
gi|292810323|gb|EFF69528.1| ribosome biogenesis GTP-binding protein YlqF [Butyrivibrio
crossotus DSM 2876]
Length = 294
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 118/208 (56%)
Query: 101 QWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMI 160
WYPGH+ K ++ +++ +K D+VIE+ DARIP+S+ +P +D N+ R++++N+ D+
Sbjct: 14 NWYPGHMTKAKRMMQEDIKFNDIVIELIDARIPMSSRNPDIDDLAKNKYRLILINKSDLA 73
Query: 161 SMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRA 220
W +F KQG KVI + + G ++ + + + R +G++ R VRA
Sbjct: 74 DERVTVKWVEFFEKQGIKVIKLDSRQRSGMKSVNNAILEVCKEKIERDRKRGIINRPVRA 133
Query: 221 GIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQ 280
IVG PNVGKS+ IN + +PGVT+ +W+R K +E LD+PGI+ + ++
Sbjct: 134 MIVGIPNVGKSTFINSFAGKACAKTGNKPGVTKGKQWIRLNKTVELLDTPGILWPKFDNE 193
Query: 281 AAAIKLAICDDIGERSYDVADVAAILVQ 308
A LA I ++ ++ +++ ++
Sbjct: 194 KIANDLAFIGSINDQILNLTELSLKFIE 221
>gi|419718995|ref|ZP_14246289.1| ribosome biogenesis GTP-binding protein YlqF [Lachnoanaerobaculum
saburreum F0468]
gi|383304864|gb|EIC96255.1| ribosome biogenesis GTP-binding protein YlqF [Lachnoanaerobaculum
saburreum F0468]
Length = 281
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 122/213 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ + D +KL+D++IE+ DAR P + +P + + ++ RI++LN+ D+
Sbjct: 3 IQWYPGHMTKAKRAMSDVIKLVDIIIEMTDARAPEAGRNPEITELGADKSRIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N WA+++ +QG + +F + + G L + + ++ + +G+ R VR
Sbjct: 63 ANELANNRWASFYKEQGYECMFMDSRKNNGVGVLIKAIENVSKKKRERDAKRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+LIN + R M +PGVT+ +W++ +E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTLINSVSGRAMAKTGNKPGVTKGNQWIKLKGQIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ +A I + D+ ++ L++ L +
Sbjct: 183 ERVGEMIAFIGSINDMIIDIRELGLELIKWLLK 215
>gi|259503397|ref|ZP_05746299.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus antri
DSM 16041]
gi|259168642|gb|EEW53137.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus antri
DSM 16041]
Length = 290
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 121/211 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DAR+P S+ +P + G + R+L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDIVFELVDARVPYSSQNPEVALAAGEKPRLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W +FA QG V+ + + + ++ +K + D V+ +KGL R +R
Sbjct: 64 ADPDRLAEWQRFFADQGQPVLALDSRRHNVSKLVTAKSKEILHDQLVQEAAKGLKKRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAQTGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFAS 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA+ I + Y DVA + L
Sbjct: 184 PKRGVMLALSGAIKDSLYPKDDVALFALAYL 214
>gi|373496782|ref|ZP_09587327.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
12_1B]
gi|404368391|ref|ZP_10973743.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
ulcerans ATCC 49185]
gi|313687691|gb|EFS24526.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
ulcerans ATCC 49185]
gi|371964761|gb|EHO82267.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium sp.
12_1B]
Length = 287
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 125/219 (57%), Gaps = 2/219 (0%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
S+ + WYPGH+ KT+ +K+ ++L+D+V+EV DARIPLS+ +P + + N+KR++VLN
Sbjct: 2 SMTKINWYPGHMKKTKDLIKENMQLIDIVLEVVDARIPLSSKNPDISVFAKNKKRVIVLN 61
Query: 156 REDMISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGL 213
+ D++ ++ W YF + +V+ + + G L + ++++ K ++KGL
Sbjct: 62 KSDLVEKSEILYWKKYFKENNLADEVLEISAETGFNIKALYSIIDKVSAEKKEKMKAKGL 121
Query: 214 LPRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGII 273
R +VG PNVGKS LINR++ + +PG T+ +WVR + LE LD+PGI+
Sbjct: 122 RKVNTRLMVVGIPNVGKSRLINRIVGKSSAGVGNKPGFTKGKQWVRIKEGLELLDTPGIL 181
Query: 274 PMRISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ LAI I + + D++ IL+ + +
Sbjct: 182 WPKFESDEVGQNLAITGAIRDEILPIEDISCILISKMIK 220
>gi|270290221|ref|ZP_06196446.1| ribosome biogenesis GTP-binding protein YlqF [Pediococcus
acidilactici 7_4]
gi|270281002|gb|EFA26835.1| ribosome biogenesis GTP-binding protein YlqF [Pediococcus
acidilactici 7_4]
Length = 287
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 124/212 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++++LKL+DVV E+ DARIP+S+ +P+++ + ++ +L+L + D+
Sbjct: 4 IQWYPGHMAKAIRQVEEKLKLVDVVFELVDARIPVSSRNPMIESVIKDKPHLLILTKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W YF K G + N + + + +A+ ++ S+G+ ++
Sbjct: 64 ADPQETQRWLEYFRKNGDHAVALNSKEPSTEKIILKHTRAILANKLENWESRGIKKTEIK 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ +G PNVGKS+L+N L+ +++ RPGVT+ +W++ + L LD+PGI+ + D
Sbjct: 124 SMCIGIPNVGKSTLLNHLVNKKVAITGDRPGVTKKQQWLKSRQGLYLLDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLA 311
Q+ KLA I + Y DVA +Q+ +
Sbjct: 184 QSVGSKLAFTGAIKDNLYANDDVALFGLQIFS 215
>gi|256843159|ref|ZP_05548647.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus 125-2-CHN]
gi|256614579|gb|EEU19780.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus 125-2-CHN]
Length = 279
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP ++ +P+++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLGLIDVLVEVLDARIPQASRNPMIEGLVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AWA A V+ + KL L K A+ K ++G +R
Sbjct: 64 ADPVLTKAWAAELAGDNKYVLALDSLHNTNMQKLVSLVKKAAAAKTEKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ + + +PGVT+ +W++ +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTVINRLVGQNVAEVGNKPGVTKGQRWLKTNANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALFVLKNL 214
>gi|363899265|ref|ZP_09325775.1| ribosome biogenesis GTP-binding protein YlqF [Oribacterium sp.
ACB1]
gi|395209656|ref|ZP_10398750.1| ribosome biogenesis GTP-binding protein YlqF [Oribacterium sp.
ACB8]
gi|361959102|gb|EHL12398.1| ribosome biogenesis GTP-binding protein YlqF [Oribacterium sp.
ACB1]
gi|394705287|gb|EJF12816.1| ribosome biogenesis GTP-binding protein YlqF [Oribacterium sp.
ACB8]
Length = 292
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 124/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++K+ L L+D +IEV D+R P S+ +P +D ++ RI++ N+ D+
Sbjct: 3 IQWYPGHMAKAKRKMKEDLPLVDAIIEVIDSRCPNSSRNPEIDILAKDKARIMLFNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A ++ F KQG + + + +S+L +++ +++ KG+L ++++
Sbjct: 63 ADPARTKSFMESFRKQGFYTMEMDARSRSSVKGVSKLVMESCAELLERKKQKGILSQSIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+ IN + + +PGVT+ +W++ GKDL+ LD+PGI +
Sbjct: 123 AMVLGIPNVGKSTFINAYVGKATAKTGNKPGVTKGAQWIKIGKDLQLLDTPGITWPKFER 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LA+ I + + ++ L++ L R
Sbjct: 183 EIVGLNLALIGSINDEILPIEELIFYLLKYLTR 215
>gi|227499924|ref|ZP_03930017.1| GTP-binding protein [Anaerococcus tetradius ATCC 35098]
gi|227218033|gb|EEI83306.1| GTP-binding protein [Anaerococcus tetradius ATCC 35098]
Length = 280
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 124/214 (57%), Gaps = 1/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+ KT++ + D LKL+DVV+E+ D+RIP+S+ +P++D+ + ++ RI+++N+ D+
Sbjct: 5 INWFPGHMKKTKEIIIDNLKLVDVVLEIIDSRIPISSRNPMIDEIIADKPRIIIMNKSDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F ++G I N + + ++ + AK L D K K + +R
Sbjct: 65 SDPEVNKKWIAKFKEEGIPAILMNSKENVPVDRIYKEAKILLKDKFKKNEEKNIDNPLIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
IVG PN GKS+ IN+L K++ RPG+T+ +W++ G +++ LD+PGI+ + +
Sbjct: 125 MMIVGVPNSGKSTFINKLSKKKGAKVGNRPGITQSKQWIKAGSNIQLLDTPGILWPKF-E 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ + L+ + I + ++ D+ ++ + I
Sbjct: 184 EKIGLHLSFTNAIRDEVLNIEDLTLKFLEEMKEI 217
>gi|262046366|ref|ZP_06019328.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus MV-3A-US]
gi|260573237|gb|EEX29795.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
crispatus MV-3A-US]
Length = 279
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 118/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV +EV DARIP ++ +P+++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLGLIDVWVEVLDARIPQASRNPMIEGLVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AWA A V+ + KL L K A+ K ++G +R
Sbjct: 64 ADPVLTKAWAAELAGDNKYVLALDSLHNTNMQKLVSLVKKAAAAKTEKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W++ +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTVINRLVGRNVAEVGNKPGVTKGQRWLKTNANIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALFVLKNL 214
>gi|384455756|ref|YP_005668351.1| ribosomal biogenesis GTPase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417959722|ref|ZP_12602472.1| Putative GTPase [Candidatus Arthromitus sp. SFB-1]
gi|417960827|ref|ZP_12603348.1| Putative GTPase [Candidatus Arthromitus sp. SFB-2]
gi|417962402|ref|ZP_12604612.1| Putative GTPase [Candidatus Arthromitus sp. SFB-3]
gi|417965561|ref|ZP_12607069.1| Putative GTPase [Candidatus Arthromitus sp. SFB-4]
gi|417967252|ref|ZP_12608411.1| Putative GTPase [Candidatus Arthromitus sp. SFB-5]
gi|417968292|ref|ZP_12609325.1| Putative GTPase [Candidatus Arthromitus sp. SFB-co]
gi|418372609|ref|ZP_12964701.1| Putative GTPase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|346984099|dbj|BAK79775.1| ribosomal biogenesis GTPase [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380332721|gb|EIA23467.1| Putative GTPase [Candidatus Arthromitus sp. SFB-1]
gi|380335014|gb|EIA25312.1| Putative GTPase [Candidatus Arthromitus sp. SFB-2]
gi|380336373|gb|EIA26391.1| Putative GTPase [Candidatus Arthromitus sp. SFB-4]
gi|380337724|gb|EIA26736.1| Putative GTPase [Candidatus Arthromitus sp. SFB-5]
gi|380337767|gb|EIA26777.1| Putative GTPase [Candidatus Arthromitus sp. SFB-3]
gi|380339957|gb|EIA28612.1| Putative GTPase [Candidatus Arthromitus sp. SFB-co]
gi|380342278|gb|EIA30723.1| Putative GTPase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 286
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 8/217 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+KE+K+ + L+D+VIE+RDAR +STT+P ++ ++ +I+VL++ D+
Sbjct: 3 INWYPGHMFKTKKEIKNMINLVDLVIEIRDARSVISTTNPDIEMLTKDKPKIIVLSKVDL 62
Query: 160 ISMADRNAWATYFAKQGTKV----IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
N W Y+ QG I N + +++ L K+ + RSKG+
Sbjct: 63 ADNNTTNKWIEYYKNQGIPCIDVDIIRNKNIKNIKAQINFLMKSKLD----RYRSKGVKN 118
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R I+G PNVGKSSLIN++ ++ RPGVT+ +W++ D++ LD+PGI+
Sbjct: 119 YTLRGMILGIPNVGKSSLINKISNNKIAKVGNRPGVTKSNQWIKTKWDIDLLDTPGILWP 178
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + L + + DV DV +++ L +
Sbjct: 179 KFDSTEVGLNLVYIGSVKDEILDVQDVCYNMLEYLLK 215
>gi|260101618|ref|ZP_05751855.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
helveticus DSM 20075]
gi|417007631|ref|ZP_11945406.1| GTP binding protein [Lactobacillus helveticus MTCC 5463]
gi|260084581|gb|EEW68701.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
helveticus DSM 20075]
gi|328467372|gb|EGF38450.1| GTP binding protein [Lactobacillus helveticus MTCC 5463]
Length = 283
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +P+++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLGLIDVLVEVLDARIPESSRNPMIEDLVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W+ + G V+ + KL + K A++ K ++G +R
Sbjct: 64 ADPVLTKNWSAKLSGPGKYVLAIDSLHNTNMQKLISMVKKAAAEKTKKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W+R +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTIINRLVGRNVAEVGNKPGVTKGQRWLRTSNNIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALYVLENL 214
>gi|395240791|ref|ZP_10417815.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394475573|emb|CCI87792.1| Ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 279
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 113/213 (53%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP ++ +P++ + +G + I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLNLIDVIVEVLDARIPQASRNPMIGELVGQKPHIVILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W K VI + L L K S K KG + +R
Sbjct: 64 ADPVLTKFWQKELQKTANYVIAMDSLHNTNMQGLIHLIKKAGSAKTKKFEDKGAVNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
G PN GKS++INRL+ R + +PGVT+ W++ +++ LD+PGI+ + D
Sbjct: 124 IAFAGIPNCGKSTIINRLVGRNVAEVGNKPGVTKGQTWLKTKSNIQILDTPGILWPKFDD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
Q KLA I + + DVA ++++L +
Sbjct: 184 QQVGYKLAAFGAIKDTVFHADDVALFVLELLRK 216
>gi|342732353|ref|YP_004771192.1| ribosomal biogenesis GTPase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|418016245|ref|ZP_12655810.1| ribosome biogenesis GTP-binding protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|342329808|dbj|BAK56450.1| ribosomal biogenesis GTPase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506580|gb|EGX28874.1| ribosome biogenesis GTP-binding protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
Length = 289
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 8/217 (3%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+KE+K+ + L+D+VIE+RDAR +STT+P ++ ++ +I+VL++ D+
Sbjct: 6 INWYPGHMFKTKKEIKNMINLVDLVIEIRDARSVISTTNPDIEMLTKDKPKIIVLSKVDL 65
Query: 160 ISMADRNAWATYFAKQGTKV----IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
N W Y+ QG I N + +++ L K+ + RSKG+
Sbjct: 66 ADNNTTNKWIEYYKNQGIPCIDVDIIRNKNIKNIKAQINFLMKSKLD----RYRSKGVKN 121
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R I+G PNVGKSSLIN++ ++ RPGVT+ +W++ D++ LD+PGI+
Sbjct: 122 YTLRGMILGIPNVGKSSLINKISNNKIAKVGNRPGVTKSNQWIKTKWDIDLLDTPGILWP 181
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + L + + DV DV +++ L +
Sbjct: 182 KFDSTEVGLNLVYIGSVKDEILDVQDVCYNMLEYLLK 218
>gi|161507469|ref|YP_001577423.1| GTP binding protein [Lactobacillus helveticus DPC 4571]
gi|160348458|gb|ABX27132.1| GTP binding protein [Lactobacillus helveticus DPC 4571]
Length = 283
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 120/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+D+L L+DV++EV DARIP S+ +P+++ +GN+ I++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEDKLGLIDVLVEVLDARIPESSRNPMIEDLVGNKPHIIILNKADL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W+ + G V+ + KL + K A++ K ++G +R
Sbjct: 64 ADPVLTKNWSAKLSGPGKYVLAIDSLHNTNMQKLISMVKKAAAEKTKKLEARGASNPTIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PN GKS++INRL+ R + +PGVT+ +W+R +++ LD+PGI+ + SD
Sbjct: 124 IALAGIPNCGKSTIINRLVGRNVAEVGNKPGVTKGQRWLRTSSNIQVLDTPGILWPKFSD 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDSVFHADDVALYVLENL 214
>gi|262068273|ref|ZP_06027885.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
periodonticum ATCC 33693]
gi|291378011|gb|EFE85529.1| ribosome biogenesis GTP-binding protein YlqF [Fusobacterium
periodonticum ATCC 33693]
Length = 290
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 2/215 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT+ +++ LKL+DVV+E+ DARIPLS+ +P + N+KRI+VLN+ D+
Sbjct: 4 INWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLNKSDL 63
Query: 160 ISMADRNAWATYFAKQ--GTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
+ + W YF +Q +V+ + + G KL + ++ + K KGL +
Sbjct: 64 LEKKELEVWKKYFKEQDFADEVVEMSAETGYNLKKLYEAIEFVSKERKEKLLKKGLKKVS 123
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
R ++G PNVGKS LINR++ + +PG T+ +WVR + +E LD+PGI+ +
Sbjct: 124 TRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVRIKEGIELLDTPGILWPKF 183
Query: 278 SDQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LAI I + + DVA L++ + +
Sbjct: 184 ESETVGVNLAISGAIRDEILPIEDVACSLIRKMLK 218
>gi|167769414|ref|ZP_02441467.1| hypothetical protein ANACOL_00744 [Anaerotruncus colihominis DSM
17241]
gi|167668382|gb|EDS12512.1| ribosome biogenesis GTP-binding protein YlqF [Anaerotruncus
colihominis DSM 17241]
Length = 301
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 114/200 (57%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AKT + + D L+L+D+++E+ DARIP+S+ +P + + G + R+L+LN+ D
Sbjct: 18 IQWFPGHMAKTRRLMADSLRLVDILVELADARIPVSSRNPEIGRLAGQKPRVLLLNKCDA 77
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A W Y+A G + ++ + G G L + + KR +KG+ + VR
Sbjct: 78 ADDAITRRWLDYYAGAGLPALAADCRSGRGLGAFLPLVRETLAPQLAKRAAKGMSGQPVR 137
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+ G PNVGKSSLINRL R RPGVTR +WV GK +E LD PG++ + D
Sbjct: 138 MMVAGVPNVGKSSLINRLAGSRRAKVEDRPGVTRGRQWVSLGKGVELLDMPGVLWPKFED 197
Query: 280 QAAAIKLAICDDIGERSYDV 299
A +LA + + D+
Sbjct: 198 PAVGERLAFTGAVKDDIVDI 217
>gi|399889398|ref|ZP_10775275.1| GTPase YlqF [Clostridium arbusti SL206]
Length = 284
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 119/213 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AKT +E+K+ LKL+D VIE+RD+RI S+ +P ++ ++ RI++LN+ D+
Sbjct: 5 INWFPGHMAKTRREIKENLKLVDAVIEIRDSRIVQSSANPEINTICKDKPRIILLNKCDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW +K + + N G+G + L + + + KG++ +R
Sbjct: 65 SEEKVTKAWINTLSKDNVRALAINSLNGIGLKNIKGELDNLLKEKIDRLKQKGVMNVIIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS IN++ K +PGVTR +W++ +E +D+PG++ + +
Sbjct: 125 VMVVGIPNVGKSSFINKMAKNTAAKIGDKPGVTRTKQWIKTKIGIELMDTPGVLWPKFEE 184
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LA I + DV ++A LV+ L +
Sbjct: 185 KKVGLNLAFTGAIKDEIMDVEELALNLVERLQK 217
>gi|148544007|ref|YP_001271377.1| GTP-binding protein YlqF [Lactobacillus reuteri DSM 20016]
gi|184153401|ref|YP_001841742.1| GTPase [Lactobacillus reuteri JCM 1112]
gi|227364920|ref|ZP_03848965.1| GTP-binding protein [Lactobacillus reuteri MM2-3]
gi|325682455|ref|ZP_08161972.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus reuteri
MM4-1A]
gi|148531041|gb|ABQ83040.1| Ras superfamily GTP-binding protein YlqF [Lactobacillus reuteri DSM
20016]
gi|183224745|dbj|BAG25262.1| GTPase [Lactobacillus reuteri JCM 1112]
gi|227070067|gb|EEI08445.1| GTP-binding protein [Lactobacillus reuteri MM2-3]
gi|324978294|gb|EGC15244.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus reuteri
MM4-1A]
Length = 290
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D++ E+ DAR+P S+ +P + G + ++L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDILFELVDARVPYSSQNPEVALAAGEKPKLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YF + V+ + + ++ +K + D + ++KG+ R +R
Sbjct: 64 ADQKRLNEWIKYFEQHNQPVLALDSRQNNVAKVVTAKSKEILKDKLAEEKAKGMKKRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
I LA+ I + Y DVA + L
Sbjct: 184 PKQGIMLALTGAIKDSLYAKDDVALFALDYL 214
>gi|418028946|ref|ZP_12667495.1| hypothetical protein LDBUL1632_00289 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354691283|gb|EHE91221.1| hypothetical protein LDBUL1632_00289 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 285
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 116/211 (54%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +L+++L L+DVVIEV DARIP ++ +P++ + +G++ +++LN+ D+
Sbjct: 4 IQWYPGHMNKARNQLEEKLNLIDVVIEVLDARIPSASRNPMISELVGDKPHLIILNKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W T V+ + Q L+ L K AS+ K +G +R
Sbjct: 64 ADPVMTKLWQKKLQGPRTLVMAMDAQHNTNMQALTTLIKKAASEKVKKLEERGASNPIIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PN GKS++INRL+ R + RPGVT+ W++ ++ LD+PGI+ + D
Sbjct: 124 VCLVGVPNCGKSTIINRLVGRNVTMTGDRPGVTKGQAWLKTPYGIQILDTPGILWPKFED 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q KLA I + + DVA +++ L
Sbjct: 184 QEVGYKLAAFGAIKDTIFHADDVALFVIRQL 214
>gi|297587482|ref|ZP_06946126.1| ribosome biogenesis GTP-binding protein YlqF [Finegoldia magna ATCC
53516]
gi|297574171|gb|EFH92891.1| ribosome biogenesis GTP-binding protein YlqF [Finegoldia magna ATCC
53516]
Length = 285
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 119/218 (54%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+ + WYPGH+ K ++K+ +KL+D+V+ + D+RI S+ +P+++ L ++ ++++LN
Sbjct: 2 DINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILLN 61
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ DM W YFAK+ + + + G K+ AK + DV R+ K +
Sbjct: 62 KMDMADPKITQNWINYFAKKNITALPIDSKNGRNLDKIEPTAKKILEDVLANRKDKNIKS 121
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R IVG PNVGKS++IN+L R+ PGVTR +W+R +E LD+PG++
Sbjct: 122 EIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRSNQWIRIKGKMELLDTPGVLWP 181
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ D + LA I + D ++A L++ L I
Sbjct: 182 KFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSI 219
>gi|227543434|ref|ZP_03973483.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|338204384|ref|YP_004650529.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus reuteri
SD2112]
gi|227186586|gb|EEI66657.1| GTP-binding protein [Lactobacillus reuteri CF48-3A]
gi|336449624|gb|AEI58239.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus reuteri
SD2112]
Length = 290
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D++ E+ DAR+P S+ +P + G + ++L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDILFELVDARVPYSSQNPEVALAAGEKPKLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YF + V+ + + ++ +K + D + ++KG+ R +R
Sbjct: 64 ADQKRLNEWIKYFEQHNQPVLALDSRQNNVAKVVTAKSKEILKDKLAEEKAKGMKKRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
I LA+ I + Y DVA + L
Sbjct: 184 PKQGIMLALTGAIKDSLYAKDDVALFALDYL 214
>gi|335046480|ref|ZP_08539503.1| ribosome biogenesis GTP-binding protein YlqF [Oribacterium sp. oral
taxon 108 str. F0425]
gi|333760266|gb|EGL37823.1| ribosome biogenesis GTP-binding protein YlqF [Oribacterium sp. oral
taxon 108 str. F0425]
Length = 292
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 124/213 (58%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK ++++K+ L L+D +IEV D+R P S+ +P +D ++ RI++ N+ D+
Sbjct: 3 IQWYPGHMAKAKRKMKEDLPLVDAIIEVIDSRCPNSSRNPEIDILAKDKARIMLFNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
A ++ F KQG + + + +++L +++ +++ KG+L ++++
Sbjct: 63 ADPARTKSFMESFQKQGFYTMEMDARSRSSVKGVNKLVMESCAELLERKKQKGILSQSIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+ IN + + +PGVT+ +W++ GKDL+ LD+PGI +
Sbjct: 123 AMVLGIPNVGKSTFINAYVGKATAKTGNKPGVTKGAQWIKIGKDLQLLDTPGITWPKFER 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ + LA+ I + + ++ L++ L R
Sbjct: 183 EIVGLNLALIGSINDEILPIEELIFYLLKYLTR 215
>gi|374308409|ref|YP_005054840.1| ribosome biogenesis GTP-binding protein YlqF [Filifactor alocis
ATCC 35896]
gi|291166734|gb|EFE28780.1| ribosome biogenesis GTP-binding protein YlqF [Filifactor alocis
ATCC 35896]
Length = 288
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 126/211 (59%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ KT + +++ + ++DVV+EV D+RIP S+ +P +++ G++ +++LN+ED+
Sbjct: 6 INWYPGHMKKTRELIENNMSIVDVVVEVVDSRIPKSSKNPDIEKIAGSKPIVILLNKEDL 65
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ W Y+ KQ VI NG G GT +L + K + + +++GL RA+R
Sbjct: 66 SDERETKKWIDYYKKQNHSVISYNGTTGDGTKELLQEIKESFAPKLERLQNRGLKDRAIR 125
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
I G PN GKS+LINRL KR+ R GVT+ +WV+ +LE LD+PGI+ + D
Sbjct: 126 IMIAGVPNSGKSTLINRLSKRKSTQTGDRAGVTKGKQWVKLKGNLEMLDTPGILWPKFED 185
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
Q A+ LA I + D+ ++A L+ L
Sbjct: 186 QRVALMLAFTGAIRDEVLDLEEIAFALLNEL 216
>gi|227513335|ref|ZP_03943384.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227524478|ref|ZP_03954527.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227083208|gb|EEI18520.1| GTP-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227088348|gb|EEI23660.1| GTP-binding protein [Lactobacillus hilgardii ATCC 8290]
Length = 290
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 114/204 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++ ++ + L+D+V EV DARIP ++ +P + + G + + +L ++D+
Sbjct: 5 IQWFPGHMAKAIRQFEENIGLVDIVFEVIDARIPYASQNPEVARITGEKPHLFILTKKDL 64
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W F +G I + + + + L S+ + KG+ R +R
Sbjct: 65 ADPRLTQRWLDSFKSKGQPAIAVDAKTKFNIGNVLSVISPLLSEKLAREEQKGMKKRPIR 124
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+++NRL+ RR RPGVT+ +W++ GK+LE LD+PGI+ +
Sbjct: 125 AISVGVPNVGKSTVLNRLVNRRAAQVGNRPGVTKGQQWLKAGKELELLDTPGILWPKFES 184
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
Q A KLA+ I + + D+A
Sbjct: 185 QETANKLALTGAIKDSVFASDDIA 208
>gi|260893263|ref|YP_003239360.1| ribosome biogenesis GTP-binding protein YlqF [Ammonifex degensii
KC4]
gi|260865404|gb|ACX52510.1| ribosome biogenesis GTP-binding protein YlqF [Ammonifex degensii
KC4]
Length = 271
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ WYPGH+ K + L+ L L+ VV E+ DARIP S+ +P + + L + R++VLN+ED+
Sbjct: 3 LHWYPGHMVKARRLLRAHLPLVQVVFELLDARIPYSSRNPDIAELLAGKPRVVVLNKEDL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
AW Y ++G + N G G KL + +A K G+L R
Sbjct: 63 ADPQATRAWLAYLEREGHPALAVNSLTGKGLNKLEEALRRVA-----KPGRTGIL----R 113
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
+VG PNVGKSS INRL++ R +PGVT+ +W++ + E LD+PG++ R D
Sbjct: 114 GMVVGIPNVGKSSFINRLVRGRAAAVGAKPGVTKGKQWIKVTPNFELLDTPGVLWPRFED 173
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
+KLA+ + E DV A
Sbjct: 174 PEVGLKLAVTGALKEEVIDVEAAA 197
>gi|402836326|ref|ZP_10884866.1| ribosome biogenesis GTP-binding protein YlqF [Mogibacterium sp.
CM50]
gi|402271422|gb|EJU20666.1| ribosome biogenesis GTP-binding protein YlqF [Mogibacterium sp.
CM50]
Length = 295
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 120/214 (56%), Gaps = 4/214 (1%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
+R + WYPGH+ KT + +++ LK +D+V+E+ D+RIPLS+ +P++++ + +KR+++L +
Sbjct: 2 IRNINWYPGHMKKTRELIQENLKTVDLVVEIVDSRIPLSSRNPIIEELVAGKKRVVILGK 61
Query: 157 EDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPR 216
D+ + W + + G + + + G + + + +R L R
Sbjct: 62 FDLADESVTMEWKAFLGRNGIIALPVDSRNGDNIKAFYTILDKYQQERDRER----ALKR 117
Query: 217 AVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMR 276
+R IVG PNVGKSS INRL+ R+ RPGVT+ +WV ++ LD+PGI+ +
Sbjct: 118 PLRMMIVGVPNVGKSSFINRLIGRKSAKTGDRPGVTKGKQWVTLANGMQLLDTPGILWPK 177
Query: 277 ISDQAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ + LA C I + +V D+A L+++L
Sbjct: 178 FEEPGVGLNLAFCGSIKDEILNVQDLAFELLKVL 211
>gi|315918507|ref|ZP_07914747.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
gi|317059682|ref|ZP_07924167.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313685358|gb|EFS22193.1| GTP-binding protein [Fusobacterium sp. 3_1_5R]
gi|313692382|gb|EFS29217.1| GTP-binding protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 294
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 125/218 (57%), Gaps = 3/218 (1%)
Query: 97 LRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNR 156
+ + WYPGH+ KT+ +K+ + L+DVV+E+ DARIP+S+ +P + + N+KRI+VLN+
Sbjct: 1 MTEINWYPGHMKKTKDLIKENMPLIDVVLEIVDARIPISSKNPDIPVFAKNKKRIVVLNK 60
Query: 157 EDMISMADRNAWATYFAK--QGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
D++ ++ + W YF K + V+ + + G +L ++ + K +KGL
Sbjct: 61 SDLMEKSELSKWKEYFLKVEKADAVVEISAETGYNVKQLYACIDKVSKEKKDKLYAKGLK 120
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
+R ++G PNVGKS LINR++ + +PG T+ +WV+ LE LD+PGI+
Sbjct: 121 KVNIRIIVLGIPNVGKSRLINRIVGKNSAGVGNKPGFTKGKQWVKLKDGLELLDTPGILW 180
Query: 275 MRISDQAAAIKLAICDDIGERSYDVADVA-AILVQMLA 311
+ ++ LA+ I + + +VA A L +M++
Sbjct: 181 PKFENREVGFHLAMTGAIKDEILPLEEVACAFLSKMIS 218
>gi|315652840|ref|ZP_07905814.1| ribosome biogenesis GTP-binding protein YlqF [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315485042|gb|EFU75450.1| ribosome biogenesis GTP-binding protein YlqF [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 281
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 121/213 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K ++ + D +KL+D++IE+ DAR P + +P + + ++ RI++LN+ D+
Sbjct: 3 IQWYPGHMIKAKRAMSDVIKLVDIIIEMTDARAPEAGRNPEIMELGADKSRIIILNKADL 62
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
+ N WA+++ +QG + +F + + G L + ++ + +G+ R VR
Sbjct: 63 ANELANNRWASFYKEQGYECMFMDSRKNNGVGVLIKAIDNVSKKKRERDAKRGIKNRPVR 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A + G PNVGKS+LIN + R M +PGVT+ +W++ +E LD+PGI+ + D
Sbjct: 123 AMVAGIPNVGKSTLINSVSGRAMAKTGNKPGVTKGNQWIKLKGQIELLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ +A I + D+ ++ L++ L +
Sbjct: 183 ERVGEMIAFIGSINDMIIDIRELGLELIKWLLK 215
>gi|373464336|ref|ZP_09555875.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
kisonensis F0435]
gi|371762538|gb|EHO51067.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
kisonensis F0435]
Length = 292
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK ++ ++ L L+D+V EV DARIP S+ +P + + ++ + ++ + D+
Sbjct: 5 IQWFPGHMAKAIRQFEENLSLVDIVFEVIDARIPYSSQNPEIKRISADKPHLFIMTKRDL 64
Query: 160 ISMADRNAWATYFA--KQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRA 217
+W YF KQ I + Q G+ + +S ++ L + + + KG+ R
Sbjct: 65 ADPKMTASWLRYFKEIKQPAIAIDAKTQFGINNV-ISVISPILKAKLQ-REEDKGMKKRP 122
Query: 218 VRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRI 277
+RA VG PNVGKS+++NRL+ RR RPGVT+ +W++ G LE LD+PGI+ +
Sbjct: 123 IRAISVGVPNVGKSTVLNRLVNRRAAQVGNRPGVTKGQQWLKSGSKLELLDTPGILWPKF 182
Query: 278 SDQAAAIKLAICDDIGERSYDVADVA 303
++Q A KLA+ I + + D+A
Sbjct: 183 ANQEIANKLALTGAIKDSVFHSDDIA 208
>gi|320527487|ref|ZP_08028668.1| ribosome biogenesis GTP-binding protein YlqF [Solobacterium moorei
F0204]
gi|320132200|gb|EFW24749.1| ribosome biogenesis GTP-binding protein YlqF [Solobacterium moorei
F0204]
Length = 289
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 117/202 (57%), Gaps = 13/202 (6%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+ K +E+ ++LK +D++IE+RDARIP ++ +P++ Q + R++VL++ DM
Sbjct: 4 IQWYPGHMEKARREMTERLKSVDMLIELRDARIPEASVNPMLKQMAQGKPRLIVLSKIDM 63
Query: 160 ISMADRNAWATYFAKQGTKV-----IFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLL 214
W Y + QG + + Q G K+ R A L + K+ ++G+
Sbjct: 64 ADPVQTKKWVEYLS-QGENACLALDLMRDSQCGK---KIIREAIKLMEEKRQKQIARGIR 119
Query: 215 PRAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIP 274
PRAVRA G PNVGKS++INR+ + AA +PGVTR L W+ +L+ LD+PG++
Sbjct: 120 PRAVRAMACGIPNVGKSTMINRINGKNSLKAADKPGVTRSLTWLHADSNLDLLDTPGVLW 179
Query: 275 MRISDQAAAIKLA----ICDDI 292
+ D+ LA I DDI
Sbjct: 180 PKFDDEKTGSLLAALGSINDDI 201
>gi|322516897|ref|ZP_08069795.1| ribosome biogenesis GTP-binding protein YlqF, partial
[Streptococcus vestibularis ATCC 49124]
gi|322124553|gb|EFX96032.1| ribosome biogenesis GTP-binding protein YlqF [Streptococcus
vestibularis ATCC 49124]
Length = 277
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 117/192 (60%)
Query: 104 PGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDMISMA 163
PGH++K +++++ LK +D V + DAR+PLS+ +P++ + +G++ ++L+LN+ D+
Sbjct: 1 PGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKADLADSN 60
Query: 164 DRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVRAGIV 223
W +YF QG K + N + ++ AK+L +D + R +G+ +R I+
Sbjct: 61 RTKEWRSYFETQGIKTLAINSKEQSTVKLVTDAAKSLMADKIQRLRERGIQKETLRTMII 120
Query: 224 GYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISDQAAA 283
G PN GKS+L+NRL +++ +PGVT+ +W++ KDLE LD+PGI+ + D+
Sbjct: 121 GIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFEDELVG 180
Query: 284 IKLAICDDIGER 295
+KLA+ I ++
Sbjct: 181 LKLALTGAIKDQ 192
>gi|256847170|ref|ZP_05552616.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
coleohominis 101-4-CHN]
gi|256715834|gb|EEU30809.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus
coleohominis 101-4-CHN]
Length = 290
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 124/214 (57%), Gaps = 2/214 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DARIP S+ +P + + G++ R+L+L + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMSLVDIVFELVDARIPYSSQNPEVARAAGDKPRLLILTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKL-SRLAKALASDVNVKRRSKGLLPRAV 218
W +FA V+ + + G K+ ++ A+++ D ++KG+ RA+
Sbjct: 64 ADPQVTQEWLNFFAHHDQPVLALDSR-GRNVAKVVTQKAQSILVDKLAAEQAKGMKKRAI 122
Query: 219 RAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRIS 278
RA VG PNVGKS+L+N L+K+ + RPGVT +W+R LE LD+PG++ + +
Sbjct: 123 RAMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAQLELLDTPGVLWPKFA 182
Query: 279 DQAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ LA+ I + + DVA + L +
Sbjct: 183 TERQGTLLALTGAIKDSLFAKDDVALFALHYLRK 216
>gi|347525434|ref|YP_004832182.1| GTPase [Lactobacillus ruminis ATCC 27782]
gi|345284393|gb|AEN78246.1| GTP-binding protein, GTPase [Lactobacillus ruminis ATCC 27782]
Length = 284
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++K+ L +D+V+E+ DAR+P S+ +P +++ L N+K I+VL + D+
Sbjct: 4 IQWYPGHMAKALRQVKENLNAVDIVLELVDARLPESSRNPQLEELLQNKKSIIVLTKMDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ + G I N G ++ + L + K ++G+ ++
Sbjct: 64 ADPKLTREWIAYYEQNGHPAIAVNSNQGTLPAIEKKIKEVLKEKIAAK-EARGIKNSRIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+K+ + +PGVT+ +W++ G L LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLLNRLVKKNVAIVGNKPGVTKAQQWLKAGSSLLLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ + + Y DVA
Sbjct: 183 PIVGKKLALTGAVKDTLYAKDDVA 206
>gi|319937634|ref|ZP_08012038.1| ribosomal biogenesis GTPase [Coprobacillus sp. 29_1]
gi|319807276|gb|EFW03888.1| ribosomal biogenesis GTPase [Coprobacillus sp. 29_1]
Length = 300
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 120/213 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+ W+PGH+AK +E+ +++K++D+VIE+ D+R P S+ +P+++ + + R++VL ++DM
Sbjct: 15 INWFPGHMAKARREISERMKVIDIVIELVDSRAPYSSKNPMLNDIINQKPRLIVLTKKDM 74
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ G + + N + K+ + + K +++G+ PRA+R
Sbjct: 75 SDDEKTKQWVHYYESIGYQAMSVNLKNFNEYQKIIEKCRKVLKPKMDKEKARGIKPRAIR 134
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A ++G PNVGKS+ IN+L R+ +PGVT+ + +R KD E D+PG++ + D
Sbjct: 135 AMVLGIPNVGKSTFINKLANRKATVTGNKPGVTKAQQIIRVAKDFELFDTPGVLWPKFED 194
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQMLAR 312
+ A +A+ I + + D+ ++ L +
Sbjct: 195 EHIARNIALLGSIKQDILPLDDLFVYVMTYLTK 227
>gi|169824228|ref|YP_001691839.1| putative GTPase [Finegoldia magna ATCC 29328]
gi|167831033|dbj|BAG07949.1| putative GTPase [Finegoldia magna ATCC 29328]
Length = 285
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 118/218 (54%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+ + WYPGH+ K ++K+ +KL+D+V+ + D+RI S+ +P+++ L ++ ++++LN
Sbjct: 2 DINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVKSSMNPVIEDILKDKPQLILLN 61
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ DM W YFAK+ + + + G K+ K + DV R+ K +
Sbjct: 62 KMDMADPKITQNWINYFAKKNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIKS 121
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R IVG PNVGKS++IN+L R+ PGVTR +W+R +E LD+PG++
Sbjct: 122 EIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRTNQWIRIKGKMELLDTPGVLWP 181
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARI 313
+ D + LA I + D ++A L++ L I
Sbjct: 182 KFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSI 219
>gi|323339886|ref|ZP_08080155.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus ruminis
ATCC 25644]
gi|417974042|ref|ZP_12614866.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
gi|323092759|gb|EFZ35362.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus ruminis
ATCC 25644]
gi|346329497|gb|EGX97792.1| GTP-binding protein [Lactobacillus ruminis ATCC 25644]
Length = 284
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QWYPGH+AK +++K+ L +D+V+E+ DAR+P S+ +P +++ L N+K I+VL + D+
Sbjct: 4 IQWYPGHMAKALRQVKENLNAVDIVLELVDARLPESSRNPQLEELLQNKKSIIVLTKMDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W Y+ + G I N G ++ + L + K ++G+ ++
Sbjct: 64 ADPKLTREWIAYYEQNGHPAIAVNSNQGTLPAIEKKIKEVLKEKIAAK-EARGIKNSRIK 122
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A +G PNVGKS+L+NRL+K+ + +PGVT+ +W++ G L LD+PGI+ + D
Sbjct: 123 AMCIGIPNVGKSTLLNRLVKKNVAIVGNKPGVTKAQQWLKAGSSLLLLDTPGILWPKFED 182
Query: 280 QAAAIKLAICDDIGERSYDVADVA 303
KLA+ + + Y DVA
Sbjct: 183 PIVGKKLALTGAVKDTLYAKDDVA 206
>gi|302380886|ref|ZP_07269348.1| ribosome biogenesis GTP-binding protein YlqF [Finegoldia magna
ACS-171-V-Col3]
gi|302311264|gb|EFK93283.1| ribosome biogenesis GTP-binding protein YlqF [Finegoldia magna
ACS-171-V-Col3]
Length = 285
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 119/220 (54%)
Query: 96 SLRPVQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLN 155
+ + WYPGH+ K ++K+ +KL+D+V+ + D+RI S+ +P+++ L ++ ++++LN
Sbjct: 2 DINNINWYPGHMKKAIDKIKENMKLVDIVLVLVDSRIVRSSMNPVIEDILKDKPQLILLN 61
Query: 156 REDMISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLP 215
+ DM W YFAK+ + + + G K+ K + DV R+ K +
Sbjct: 62 KMDMADPKITQNWINYFAKKNITALPIDSKNGKNLDKIEPTTKKILEDVLSSRKDKNIKS 121
Query: 216 RAVRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPM 275
+R IVG PNVGKS++IN+L R+ PGVTR +W+R +E LD+PG++
Sbjct: 122 EIIRMMIVGIPNVGKSTIINKLSNRQSAKTGNTPGVTRTNQWIRIKGKMELLDTPGVLWP 181
Query: 276 RISDQAAAIKLAICDDIGERSYDVADVAAILVQMLARIPT 315
+ D + LA I + D ++A L++ L I +
Sbjct: 182 KFEDNEIGLNLAFTGAIKDEILDEENLAYKLIEKLMSIDS 221
>gi|194467935|ref|ZP_03073921.1| GTP-binding protein HSR1-related [Lactobacillus reuteri 100-23]
gi|194452788|gb|EDX41686.1| GTP-binding protein HSR1-related [Lactobacillus reuteri 100-23]
Length = 290
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 118/211 (55%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D++ E+ DAR+P S+ +P + G + ++L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDILFELVDARVPYSSQNPEVALAAGEKPKLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
N W YF + V+ + + ++ +K + D + ++KG+ R +R
Sbjct: 64 ADQKRLNEWIKYFEQHNQPVLALDSRQNNVAKVVTAKSKEILKDKLAEEKAKGMKKRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAKLELLDTPGVLWHKFAT 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
I LA+ I + Y DVA + L
Sbjct: 184 PKQGIMLALTGAIKDSLYAKDDVALFALDYL 214
>gi|312869154|ref|ZP_07729328.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus oris
PB013-T2-3]
gi|417885563|ref|ZP_12529717.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus oris
F0423]
gi|311095400|gb|EFQ53670.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus oris
PB013-T2-3]
gi|341595485|gb|EGS38134.1| ribosome biogenesis GTP-binding protein YlqF [Lactobacillus oris
F0423]
Length = 290
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 119/211 (56%)
Query: 100 VQWYPGHIAKTEKELKDQLKLMDVVIEVRDARIPLSTTHPLMDQWLGNRKRILVLNREDM 159
+QW+PGH+AK +++++Q+ L+D+V E+ DAR+P S+ +P + G++ R+L++ + D+
Sbjct: 4 IQWFPGHMAKALRQIREQMPLVDIVFELVDARVPYSSQNPEVALAAGDKPRLLIMTKTDL 63
Query: 160 ISMADRNAWATYFAKQGTKVIFSNGQLGMGTMKLSRLAKALASDVNVKRRSKGLLPRAVR 219
W YF +G + + + + ++ +K + D + +KGL R +R
Sbjct: 64 ADPDRLAEWKQYFTAKGQPFLALDSRQHNVSKLVTNKSKEILHDQLAQEAAKGLKKRPIR 123
Query: 220 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRVLKWVRFGKDLEFLDSPGIIPMRISD 279
A VG PNVGKS+L+N L+K+ + RPGVT +W+R +LE LD+PG++ + +
Sbjct: 124 AMCVGVPNVGKSTLLNHLVKKNVAQTGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFAS 183
Query: 280 QAAAIKLAICDDIGERSYDVADVAAILVQML 310
+ LA+ I + Y DVA + L
Sbjct: 184 PKQGVMLALSGAIKDSLYPKDDVALFALAYL 214
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,851,440,217
Number of Sequences: 23463169
Number of extensions: 198295979
Number of successful extensions: 873338
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6590
Number of HSP's successfully gapped in prelim test: 4602
Number of HSP's that attempted gapping in prelim test: 858272
Number of HSP's gapped (non-prelim): 15782
length of query: 316
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 174
effective length of database: 9,027,425,369
effective search space: 1570772014206
effective search space used: 1570772014206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)